BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16843
(810 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 199/357 (55%), Gaps = 43/357 (12%)
Query: 346 NSDSYCSK-KDKFSKTPN----ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKN 400
N D++ S+ KD +K + D+ V+K+I GA+G V LVRHK TR+ +AMK + K
Sbjct: 51 NIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF 110
Query: 401 SLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP 460
++ R+ + ERDIM+F ++P+VV ++ +F+ ++L +VMEY+ GGD +L+ N
Sbjct: 111 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-D 169
Query: 461 LPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFG----LSKMGLM 516
+P ARFY AE VLA++ +HS G +HRD+KPDN+L+ GH+KL DFG ++K G++
Sbjct: 170 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 517 SLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQG----YGKPVDWWSMGVILYEF 572
T + GTP+YI+PEV+ QG YG+ DWWS+GV LYE
Sbjct: 230 RCDTAV------------------GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
Query: 573 LVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPH 632
LVG PF+ ++ ++ +N DD I EAK++I L RLG G
Sbjct: 272 LVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREV-RLGRNGVE 330
Query: 633 EVKEHPYFSN--LDWNSLLRHKAEFIPQLDDEEDTSYFDSRMERYNHDIGEDTDETE 687
E+K H +F N W +L A +P L + DTS FD D+ ED E E
Sbjct: 331 EIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFD--------DLEEDKGEEE 379
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 199/357 (55%), Gaps = 43/357 (12%)
Query: 346 NSDSYCSK-KDKFSKTPN----ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKN 400
N D++ S+ KD +K + D+ V+K+I GA+G V LVRHK TR+ +AMK + K
Sbjct: 46 NIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF 105
Query: 401 SLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP 460
++ R+ + ERDIM+F ++P+VV ++ +F+ ++L +VMEY+ GGD +L+ N
Sbjct: 106 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-D 164
Query: 461 LPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFG----LSKMGLM 516
+P ARFY AE VLA++ +HS G +HRD+KPDN+L+ GH+KL DFG ++K G++
Sbjct: 165 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224
Query: 517 SLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQG----YGKPVDWWSMGVILYEF 572
T + GTP+YI+PEV+ QG YG+ DWWS+GV LYE
Sbjct: 225 RCDTAV------------------GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 266
Query: 573 LVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPH 632
LVG PF+ ++ ++ +N DD I EAK++I L RLG G
Sbjct: 267 LVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREV-RLGRNGVE 325
Query: 633 EVKEHPYFSN--LDWNSLLRHKAEFIPQLDDEEDTSYFDSRMERYNHDIGEDTDETE 687
E+K H +F N W +L A +P L + DTS FD D+ ED E E
Sbjct: 326 EIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFD--------DLEEDKGEEE 374
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 180/311 (57%), Gaps = 25/311 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
NDF +KL+ G +G V LVR K T + +AMK + K ++ ++++ E ++ T +
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
PF+ + +F+T LC VMEY GG+ L + ARFY AE V A+EYLHS
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 127
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
+V+RD+K +NL++ GHIK+TDFGL K G+ AT C GTP
Sbjct: 128 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC---------------GTP 172
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
EY+APEV+ YG+ VDWW +GV++YE + G +PF+ + E LF + ++I +P
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 229
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGP---HEVKEHPYFSNLDWNSLLRHKA--EFIPQ 658
+ EAKS++ LL+++P+ RLG GGP EV EH +F +++W +++ K F PQ
Sbjct: 230 -TLSPEAKSLLAGLLKKDPKQRLG-GGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQ 287
Query: 659 LDDEEDTSYFD 669
+ E DT YFD
Sbjct: 288 VTSEVDTRYFD 298
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 199/357 (55%), Gaps = 43/357 (12%)
Query: 346 NSDSYCSK-KDKFSKTPN----ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKN 400
N D++ S+ KD +K + D+ V+K+I GA+G V LVRHK TR+ +AMK + K
Sbjct: 51 NIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF 110
Query: 401 SLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP 460
++ R+ + ERDIM+F ++P+VV ++ +F+ ++L +VMEY+ GGD +L+ N
Sbjct: 111 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-D 169
Query: 461 LPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFG----LSKMGLM 516
+P ARFY AE VLA++ +HS G +HRD+KPDN+L+ GH+KL DFG ++K G++
Sbjct: 170 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 517 SLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQG----YGKPVDWWSMGVILYEF 572
T + GTP+YI+PEV+ QG YG+ DWWS+GV LYE
Sbjct: 230 RCDTAV------------------GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
Query: 573 LVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPH 632
LVG PF+ ++ ++ +N DD I EAK++I L RLG G
Sbjct: 272 LVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREV-RLGRNGVE 330
Query: 633 EVKEHPYFSN--LDWNSLLRHKAEFIPQLDDEEDTSYFDSRMERYNHDIGEDTDETE 687
E+K H +F N W +L A +P L + DTS FD D+ ED E E
Sbjct: 331 EIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFD--------DLEEDKGEEE 379
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 180/311 (57%), Gaps = 25/311 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
NDF +KL+ G +G V LVR K T + +AMK + K ++ ++++ E ++ T +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
PF+ + +F+T LC VMEY GG+ L + ARFY AE V A+EYLHS
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
+V+RD+K +NL++ GHIK+TDFGL K G+ AT C GTP
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---------------GTP 169
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
EY+APEV+ YG+ VDWW +GV++YE + G +PF+ + E LF + ++I +P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 226
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGP---HEVKEHPYFSNLDWNSLLRHKA--EFIPQ 658
+ EAKS++ LL+++P+ RLG GGP EV EH +F +++W +++ K F PQ
Sbjct: 227 -TLSPEAKSLLAGLLKKDPKQRLG-GGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQ 284
Query: 659 LDDEEDTSYFD 669
+ E DT YFD
Sbjct: 285 VTSEVDTRYFD 295
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 180/311 (57%), Gaps = 25/311 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
NDF +KL+ G +G V LVR K T + +AMK + K ++ ++++ E ++ T +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
PF+ + +F+T LC VMEY GG+ L + ARFY AE V A+EYLHS
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
+V+RD+K +NL++ GHIK+TDFGL K G+ AT C GTP
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC---------------GTP 169
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
EY+APEV+ YG+ VDWW +GV++YE + G +PF+ + E LF + ++I +P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 226
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGP---HEVKEHPYFSNLDWNSLLRHKA--EFIPQ 658
+ EAKS++ LL+++P+ RLG GGP EV EH +F +++W +++ K F PQ
Sbjct: 227 -TLSPEAKSLLAGLLKKDPKQRLG-GGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQ 284
Query: 659 LDDEEDTSYFD 669
+ E DT YFD
Sbjct: 285 VTSEVDTRYFD 295
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 180/311 (57%), Gaps = 25/311 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
NDF +KL+ G +G V LVR K T + +AMK + K ++ ++++ E ++ T +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
PF+ + +F+T LC VMEY GG+ L + ARFY AE V A+EYLHS
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
+V+RD+K +NL++ GHIK+TDFGL K G+ AT C GTP
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---------------GTP 169
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
EY+APEV+ YG+ VDWW +GV++YE + G +PF+ + E LF + ++I +P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 226
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGP---HEVKEHPYFSNLDWNSLLRHKA--EFIPQ 658
+ EAKS++ LL+++P+ RLG GGP EV EH +F +++W +++ K F PQ
Sbjct: 227 -TLSPEAKSLLAGLLKKDPKQRLG-GGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQ 284
Query: 659 LDDEEDTSYFD 669
+ E DT YFD
Sbjct: 285 VTSEVDTRYFD 295
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 180/311 (57%), Gaps = 25/311 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
NDF +KL+ G +G V LVR K T + +AMK + K ++ ++++ E ++ T +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
PF+ + +F+T LC VMEY GG+ L + ARFY AE V A+EYLHS
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
+V+RD+K +NL++ GHIK+TDFGL K G+ AT C GTP
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---------------GTP 169
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
EY+APEV+ YG+ VDWW +GV++YE + G +PF+ + E LF + ++I +P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 226
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGP---HEVKEHPYFSNLDWNSLLRHKA--EFIPQ 658
+ EAKS++ LL+++P+ RLG GGP EV EH +F +++W +++ K F PQ
Sbjct: 227 -TLSPEAKSLLAGLLKKDPKQRLG-GGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQ 284
Query: 659 LDDEEDTSYFD 669
+ E DT YFD
Sbjct: 285 VTSEVDTRYFD 295
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 180/311 (57%), Gaps = 25/311 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
NDF +KL+ G +G V LVR K T + +AMK + K ++ ++++ E ++ T +
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
PF+ + +F+T LC VMEY GG+ L + ARFY AE V A+EYLHS
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
+V+RD+K +NL++ GHIK+TDFGL K G+ AT C GTP
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC---------------GTP 169
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
EY+APEV+ YG+ VDWW +GV++YE + G +PF+ + E LF + ++I +P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 226
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGP---HEVKEHPYFSNLDWNSLLRHKA--EFIPQ 658
+ EAKS++ LL+++P+ RLG GGP EV EH +F +++W +++ K F PQ
Sbjct: 227 -TLSPEAKSLLAGLLKKDPKQRLG-GGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQ 284
Query: 659 LDDEEDTSYFD 669
+ E DT YFD
Sbjct: 285 VTSEVDTRYFD 295
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 180/311 (57%), Gaps = 25/311 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
NDF +KL+ G +G V LVR K T + +AMK + K ++ ++++ E ++ T +
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
PF+ + +F+T LC VMEY GG+ L + ARFY AE V A+EYLHS
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 129
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
+V+RD+K +NL++ GHIK+TDFGL K G+ AT C GTP
Sbjct: 130 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC---------------GTP 174
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
EY+APEV+ YG+ VDWW +GV++YE + G +PF+ + E LF + ++I +P
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 231
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGP---HEVKEHPYFSNLDWNSLLRHKA--EFIPQ 658
+ EAKS++ LL+++P+ RLG GGP EV EH +F +++W +++ K F PQ
Sbjct: 232 -TLSPEAKSLLAGLLKKDPKQRLG-GGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQ 289
Query: 659 LDDEEDTSYFD 669
+ E DT YFD
Sbjct: 290 VTSEVDTRYFD 300
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/354 (36%), Positives = 202/354 (57%), Gaps = 37/354 (10%)
Query: 346 NSDSYCSKKDKFSKT-----PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKN 400
N D++ ++ +K K D+ V+K+I GA+G V LVRHK +++ +AMK + K
Sbjct: 52 NIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKF 111
Query: 401 SLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP 460
++ R+ + ERDIM+F ++P+VV ++C+F+ K+L +VMEY+ GGD +L+ N
Sbjct: 112 EMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-D 170
Query: 461 LPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLS-KMGLMSLA 519
+P A+FY AE VLA++ +HS G++HRD+KPDN+L+ GH+KL DFG KM
Sbjct: 171 VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD----E 226
Query: 520 TNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQG----YGKPVDWWSMGVILYEFLVG 575
T + C D V GTP+YI+PEV+ QG YG+ DWWS+GV L+E LVG
Sbjct: 227 TGMVHC----------DTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVK 635
PF+ ++ ++ ++ +D I AK++I L RLG G E+K
Sbjct: 276 DTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLTDREV-RLGRNGVEEIK 334
Query: 636 EHPYFSN--LDWNSLLRHKAEFIPQLDDEEDTSYFDSRMERYNHDIGEDTDETE 687
+HP+F N +W+++ A +P+L + D+S FD DI +D + E
Sbjct: 335 QHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFD--------DIEDDKGDVE 380
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 177/311 (56%), Gaps = 24/311 (7%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
N+F +KL+ G +G V LV+ K T + +AMK + K ++ ++++ E ++ + +
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS- 482
PF+ + SF+T LC VMEY GG+ L D ARFY AE V A++YLHS
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 128
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
+V+RDLK +NL++ GHIK+TDFGL K G+ AT C GT
Sbjct: 129 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC---------------GT 173
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSED 602
PEY+APEV+ YG+ VDWW +GV++YE + G +PF+ + E+LF + ++I +P
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR-- 231
Query: 603 DWPIQVEAKSIITDLLQQNPRDRLGTGG--PHEVKEHPYFSNLDWNSLLRHKAE--FIPQ 658
+ EAKS+++ LL+++P+ RLG G E+ +H +F+ + W + K F PQ
Sbjct: 232 --TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 289
Query: 659 LDDEEDTSYFD 669
+ E DT YFD
Sbjct: 290 VTSETDTRYFD 300
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 177/311 (56%), Gaps = 24/311 (7%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
N+F +KL+ G +G V LV+ K T + +AMK + K ++ ++++ E ++ + +
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS- 482
PF+ + SF+T LC VMEY GG+ L D ARFY AE V A++YLHS
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 267
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
+V+RDLK +NL++ GHIK+TDFGL K G+ AT C GT
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC---------------GT 312
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSED 602
PEY+APEV+ YG+ VDWW +GV++YE + G +PF+ + E+LF + ++I +P
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR-- 370
Query: 603 DWPIQVEAKSIITDLLQQNPRDRLGTGG--PHEVKEHPYFSNLDWNSLLRHKAE--FIPQ 658
+ EAKS+++ LL+++P+ RLG G E+ +H +F+ + W + K F PQ
Sbjct: 371 --TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 428
Query: 659 LDDEEDTSYFD 669
+ E DT YFD
Sbjct: 429 VTSETDTRYFD 439
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 177/311 (56%), Gaps = 24/311 (7%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
N+F +KL+ G +G V LV+ K T + +AMK + K ++ ++++ E ++ + +
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS- 482
PF+ + SF+T LC VMEY GG+ L D ARFY AE V A++YLHS
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 270
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
+V+RDLK +NL++ GHIK+TDFGL K G+ AT C GT
Sbjct: 271 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC---------------GT 315
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSED 602
PEY+APEV+ YG+ VDWW +GV++YE + G +PF+ + E+LF + ++I +P
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR-- 373
Query: 603 DWPIQVEAKSIITDLLQQNPRDRLGTGG--PHEVKEHPYFSNLDWNSLLRHKAE--FIPQ 658
+ EAKS+++ LL+++P+ RLG G E+ +H +F+ + W + K F PQ
Sbjct: 374 --TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 431
Query: 659 LDDEEDTSYFD 669
+ E DT YFD
Sbjct: 432 VTSETDTRYFD 442
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 218 bits (556), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 187/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 34 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 93
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 153
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 154 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 213
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
+ T + GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 214 GATWT------------------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 256 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 311
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 312 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 353
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 177/311 (56%), Gaps = 24/311 (7%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
N+F +KL+ G +G V LV+ K T + +AMK + K ++ ++++ E ++ + +
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS- 482
PF+ + SF+T LC VMEY GG+ L D ARFY AE V A++YLHS
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 127
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
+V+RDLK +NL++ GHIK+TDFGL K G+ AT C GT
Sbjct: 128 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC---------------GT 172
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSED 602
PEY+APEV+ YG+ VDWW +GV++YE + G +PF+ + E+LF + ++I +P
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR-- 230
Query: 603 DWPIQVEAKSIITDLLQQNPRDRLGTGG--PHEVKEHPYFSNLDWNSLLRHKAE--FIPQ 658
+ EAKS+++ LL+++P+ RLG G E+ +H +F+ + W + K F PQ
Sbjct: 231 --TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 288
Query: 659 LDDEEDTSYFD 669
+ E DT YFD
Sbjct: 289 VTSETDTRYFD 299
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 177/311 (56%), Gaps = 24/311 (7%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
N+F +KL+ G +G V LV+ K T + +AMK + K ++ ++++ E ++ + +
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS- 482
PF+ + SF+T LC VMEY GG+ L D ARFY AE V A++YLHS
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 129
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
+V+RDLK +NL++ GHIK+TDFGL K G+ AT C GT
Sbjct: 130 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC---------------GT 174
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSED 602
PEY+APEV+ YG+ VDWW +GV++YE + G +PF+ + E+LF + ++I +P
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR-- 232
Query: 603 DWPIQVEAKSIITDLLQQNPRDRLGTGG--PHEVKEHPYFSNLDWNSLLRHKAE--FIPQ 658
+ EAKS+++ LL+++P+ RLG G E+ +H +F+ + W + K F PQ
Sbjct: 233 --TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 290
Query: 659 LDDEEDTSYFD 669
+ E DT YFD
Sbjct: 291 VTSETDTRYFD 301
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 176/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+HKET FAMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 176/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+HKET FAMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 185/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 189
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 190 RVKGRTWXLC---------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 185/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 14 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 73
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 133
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 134 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 190
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 191 RVKGRTWXLC---------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 236 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 333
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 185/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 133 RRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 189
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 190 RVKGRTWXLC---------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 176/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+HKET FAMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 179/309 (57%), Gaps = 24/309 (7%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT-DN 423
DF + K++ G++G V+L K+T Q FA+K + K+ +++ + +E E+ ++S ++
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
PF+ M+C+F+TK++L VMEY+ GGD +++ A FY AE +L +++LHS
Sbjct: 78 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 137
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
GIV+RDLK DN+L+ GHIK+ DFG+ K ++ A C GTP
Sbjct: 138 GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC---------------GTP 182
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
+YIAPE++L Q Y VDWWS GV+LYE L+G PF G+ EELF D+ +P
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--- 239
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKAE--FIPQLDD 661
W ++ EAK ++ L + P RLG G ++++HP F ++W L R + + F P++
Sbjct: 240 W-LEKEAKDLLVKLFVREPEKRLGVRG--DIRQHPLFREINWEELERKEIDPPFRPKVKS 296
Query: 662 EEDTSYFDS 670
D S FD
Sbjct: 297 PFDCSNFDK 305
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 185/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 189
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 190 RVKGRTWXLC---------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 186/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-- 190
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
+ + GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 191 ----------------VKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 186/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-- 190
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
+ + GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 191 ----------------VKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 185/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 133 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 189
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 190 RVKGRTWXLC---------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 185/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 133 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 189
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 190 RVKGRTWXLC---------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 185/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 189
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 190 RVKGRTWXLC---------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 235 YPPFFADEPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 185/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 8 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 67
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 68 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 127
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 128 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 184
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 185 RVKGRTWXLC---------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 230 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 285
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 286 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 327
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 185/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 34 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 93
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 153
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 154 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 210
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 211 RVKGRTWXLC---------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 256 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 311
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 312 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 353
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 185/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 133 RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 189
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 190 RVKGRTWXLC---------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 176/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+HKET +AMK + K ++ Q+E E+ I+
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 200
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 260 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 316 IPKFKGPGDTSNFDDYEE 333
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 181/309 (58%), Gaps = 24/309 (7%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT-DN 423
DF + K++ G++G V+L K+T Q FA+K + K+ +++ + +E E+ ++S ++
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 78
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
PF+ M+C+F+TK++L VMEY+ GGD +++ A FY AE +L +++LHS
Sbjct: 79 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 138
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
GIV+RDLK DN+L+ GHIK+ DFG+ K ++ DAK + GTP
Sbjct: 139 GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG------------DAKT---NEFCGTP 183
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
+YIAPE++L Q Y VDWWS GV+LYE L+G PF G+ EELF D+ +P
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--- 240
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKAE--FIPQLDD 661
W ++ EAK ++ L + P RLG G ++++HP F ++W L R + + F P++
Sbjct: 241 W-LEKEAKDLLVKLFVREPEKRLGVRG--DIRQHPLFREINWEELERKEIDPPFRPKVKS 297
Query: 662 EEDTSYFDS 670
D S FD
Sbjct: 298 PFDCSNFDK 306
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 176/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+HKET +AMK + K ++ Q+E E+ I+
Sbjct: 30 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 89
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 149
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 192
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 193 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 251
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 252 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 307
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 308 IPKFKGPGDTSNFDDYEE 325
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 176/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+HKET +AMK + K ++ Q+E E+ I+
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 200
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 260 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 316 IPKFKGPGDTSNFDDYEE 333
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 176/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+HKET +AMK + K ++ Q+E E+ I+
Sbjct: 58 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 117
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 177
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 220
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 221 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 279
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 280 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 335
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 336 IPKFKGPGDTSNFDDYEE 353
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 185/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 189
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+APE+IL +GY K VDWW++GV++Y+ G
Sbjct: 190 RVKGRTWXLC---------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 176/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+HKET +AMK + K ++ Q+E E+ I+
Sbjct: 30 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 89
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 149
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 192
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 193 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 251
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 252 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 307
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 308 IPKFKGPGDTSNFDDYEE 325
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 175/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+HKET +AMK + K ++ Q+E E+ I+
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEY GG+ S L+ G ARFY A+ VL EY
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NL+I G+IK+TDFG +K C
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTWXLC-------------- 200
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 260 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 316 IPKFKGPGDTSNFDDYEE 333
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 119/324 (36%), Positives = 179/324 (55%), Gaps = 31/324 (9%)
Query: 359 KTPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
+TP++N F IK + G++G V LV+HKE+ +AMK + K ++ Q+E
Sbjct: 18 ETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN 77
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 137
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
VL EYLHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 138 VLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK---RVKGRTWXLC-------- 186
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN 593
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+
Sbjct: 187 -------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 239
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRH 651
+ +PS + K ++ +LLQ + R G G +++K H +F+ DW ++ +
Sbjct: 240 GKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 295
Query: 652 KAE--FIPQLDDEEDTSYFDSRME 673
K E FIP+ DTS FD E
Sbjct: 296 KVEAPFIPKFKGPGDTSNFDDYEE 319
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 185/342 (54%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NL+I G+I++TDFG +K
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK--- 189
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+APE+I+ +GY K VDWW++GV++YE G
Sbjct: 190 RVKGRTWXLC---------------GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 174/318 (54%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK I G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEY+ GGD S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+IK+ DFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 215 bits (548), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 184/342 (53%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 189
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+AP +IL +GY K VDWW++GV++YE G
Sbjct: 190 RVKGRTWXLC---------------GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 174/318 (54%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK I G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEY+ GGD S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+IK+ DFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 174/312 (55%), Gaps = 25/312 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
++F I+++ G++G V L R KET +A+K + K+ ++ + +E E+ I+S N
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 424 -PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS 482
PF+ ++C F+T L VME+V GGD ++ + ARFY AE + A+ +LH
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
GI++RDLK DN+L+ GH KL DFG+ K G+ + T C GT
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC---------------GT 187
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSED 602
P+YIAPE++ YG VDWW+MGV+LYE L G PF E ++LF +ND++ +P+
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT-- 245
Query: 603 DWPIQVEAKSIITDLLQQNPRDRLGT---GGPHEVKEHPYFSNLDWNSLLRHKAE--FIP 657
W + +A I+ + +NP RLG+ GG H + HP+F +DW L + E F P
Sbjct: 246 -W-LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRP 303
Query: 658 QLDDEEDTSYFD 669
++ ED S FD
Sbjct: 304 RIKSREDVSNFD 315
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 174/318 (54%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK I G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+IK+ DFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 191/321 (59%), Gaps = 29/321 (9%)
Query: 358 SKTPNENDFTVIKLISNGAYGSVYLVRHKETR----QRFAMKKIIKNSLMLRNQMEQVFA 413
S+ + + F ++K++ G++G V+LVR K TR +AMK + K +L +R+++ +
Sbjct: 22 SEKADPSHFELLKVLGQGSFGKVFLVR-KVTRPDSGHLYAMKVLKKATLKVRDRV-RTKM 79
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
ERDI++ ++PFVV ++ +F+T+ L L+++++ GGD + L + +FY AE
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 139
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
L +++LHS GI++RDLKP+N+L+ GHIKLTDFGLSK ++ + K
Sbjct: 140 ALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEA------------IDHEKKA 187
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN 593
+S GT EY+APEV+ RQG+ DWWS GV+++E L G +PF G+ +E +
Sbjct: 188 YS---FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILK 244
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTG--GPHEVKEHPYFSNLDWNSLLRH 651
+ P + EA+S++ L ++NP +RLG+G G E+K H ++S +DWN L R
Sbjct: 245 AKLGMPQF----LSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRR 300
Query: 652 --KAEFIPQLDDEEDTSYFDS 670
K F P + +DT YFD+
Sbjct: 301 EIKPPFKPAVAQPDDTFYFDT 321
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 176/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K T +
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT------------------L 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 260 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 316 IPKFKGPGDTSNFDDYEE 333
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 184/342 (53%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 189
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 190 RVKGRTWXLC---------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + G G ++
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKAFGNLKNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 175/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 175/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+HKET +AMK + K ++ Q+E E+ I+
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 200
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++ H +F+ DW ++ + K E F
Sbjct: 260 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIAIYQRKVEAPF 315
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 316 IPKFKGPGDTSNFDDYEE 333
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 186/313 (59%), Gaps = 27/313 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRH---KETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
+ F ++K++ G++G V+LV+ + RQ +AMK + K +L +R+++ + ERDI+
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVE 82
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
++PF+V ++ +F+T+ L L+++++ GGD + L + +FY AE LA+++L
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
HS GI++RDLKP+N+L+ GHIKLTDFGLSK ++ + K +S
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKES------------IDHEKKAYS---FC 187
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPS 600
GT EY+APEV+ R+G+ + DWWS GV+++E L G +PF G+ +E + + P
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 247
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDRLGTG--GPHEVKEHPYFSNLDWNSLLRHKAE--FI 656
+ EA+S++ L ++NP +RLG G G E+K H +FS +DWN L R + F
Sbjct: 248 F----LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFK 303
Query: 657 PQLDDEEDTSYFD 669
P EDT YFD
Sbjct: 304 PATGRPEDTFYFD 316
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 175/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 200
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 260 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 316 IPKFKGPGDTSNFDDYEE 333
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 184/342 (53%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-- 190
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPE +APE+IL +GY K VDWW++GV++YE G
Sbjct: 191 -VKGRTWXLC---------------GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS FD E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 184/342 (53%), Gaps = 34/342 (9%)
Query: 344 ESNSDSYCSKKDKFSK---TPNEN-----DFTVIKLISNGAYGSVYLVRHKETRQRFAMK 395
ES + K+ F K TP++N F IK + G++G V LV+HKE+ +AMK
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 396 KIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL 455
+ K ++ Q+E E+ I+ + PF+V + SF+ +L +VMEYV GG+ S L
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
+ G ARFY A+ VL EYLHS +++RDLKP+NLLI G+I++TDFG +K
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 189
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
C GTPEY+APE+IL +GY K VDWW++GV++YE G
Sbjct: 190 RVKGRTWXLC---------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Query: 576 CVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHE 633
PFF + P +++ V+ + +PS + K ++ +LLQ + R G G ++
Sbjct: 235 YPPFFADQPIQIYEKIVSGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLPNGVND 290
Query: 634 VKEHPYFSNLDWNSLLRHKAE--FIPQLDDEEDTSYFDSRME 673
+K H +F+ DW ++ + K E FIP+ DTS D E
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNADDYEE 332
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 175/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 175/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 176/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 23 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 82
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 83 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 142
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K T +
Sbjct: 143 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT------------------L 184
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 185 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 244
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 245 SH----FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPF 300
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 301 IPKFKGPGDTSNFDDYEE 318
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 175/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 175/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 175/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 200
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 260 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 316 IPKFKGPGDTSNFDDYEE 333
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 175/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEYV GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+I++TDFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 174/318 (54%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEY GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NL+I G+IK+TDFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 175/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ ++E E+ I+
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEY GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NL+I G+IK+TDFGL+K C
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 174/318 (54%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEY GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NL+I G+IK+TDFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 175/318 (55%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ ++E E+ I+
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEY GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NL+I G+I++TDFGL+K C
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 174/318 (54%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +VMEY GG+ S L+ G ARFY A+ VL EY
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NL+I G+I++TDFG +K C
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK---RVKGRTWXLC-------------- 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 259 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 315 IPKFKGPGDTSNFDDYEE 332
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 173/318 (54%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+ + SF+ +L +VMEY GG+ S L+ G ARFY A+ VL EY
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NL+I G+IK+TDFG +K C
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTWXLC-------------- 200
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 260 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 316 IPKFKGPGDTSNFDDYEE 333
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 173/318 (54%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F I+ + G++G V LV+HKET +AMK + K ++ Q+E E+ I
Sbjct: 38 TAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQ 97
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+V + SF+ +L +V+EY GG+ S L+ G ARFY A+ VL EY
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NLLI G+IK+ DFG +K C
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK---RVKGRTWXLC-------------- 200
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 260 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 316 IPKFKGPGDTSNFDDYEE 333
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 173/318 (54%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+ + SF+ +L +VMEY GG+ S L+ G ARFY A+ VL EY
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NL+I G+IK+TDFG +K C
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTWXLC-------------- 200
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 260 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 316 IPKFKGPGDTSNFDDYEE 333
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 173/318 (54%), Gaps = 26/318 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T + + F IK + G++G V LV+H ET +AMK + K ++ Q+E E+ I+
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+ PF+ + SF+ +L +VMEY GG+ S L+ G ARFY A+ VL EY
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS +++RDLKP+NL+I G+IK+TDFG +K C
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTWXLC-------------- 200
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GTPEY+APE+IL +GY K VDWW++GV++YE G PFF + P +++ V+ + +P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 259
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--F 655
S + K ++ +LLQ + R G G +++K H +F+ DW ++ + K E F
Sbjct: 260 SH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 656 IPQLDDEEDTSYFDSRME 673
IP+ DTS FD E
Sbjct: 316 IPKFKGPGDTSNFDDYEE 333
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 176/318 (55%), Gaps = 29/318 (9%)
Query: 366 FTVIKLISNGAYGSVYLVRH---KETRQRFAMKKIIKNSLMLRNQMEQVF--AERDIMSF 420
F +++++ G YG V+ VR T + FAMK ++K ++++RN + AER+I+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMK-VLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
+PF+V + +F+T L L++EY+ GG+ L+ G D A FY AE +A+ +L
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
H GI++RDLKP+N+++ GH+KLTDFGL K + C
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC--------------- 182
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPS 600
GT EY+APE+++R G+ + VDWWS+G ++Y+ L G PF GE ++ + + P
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--FI 656
+ EA+ ++ LL++N RLG G EV+ HP+F +++W LL K E F
Sbjct: 243 Y----LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFK 298
Query: 657 PQLDDEEDTSYFDSRMER 674
P L EED S FDS+ R
Sbjct: 299 PLLQSEEDVSQFDSKFTR 316
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 176/318 (55%), Gaps = 29/318 (9%)
Query: 366 FTVIKLISNGAYGSVYLVRH---KETRQRFAMKKIIKNSLMLRNQMEQVF--AERDIMSF 420
F +++++ G YG V+ VR T + FAMK ++K ++++RN + AER+I+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMK-VLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
+PF+V + +F+T L L++EY+ GG+ L+ G D A FY AE +A+ +L
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
H GI++RDLKP+N+++ GH+KLTDFGL K + C
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC--------------- 182
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPS 600
GT EY+APE+++R G+ + VDWWS+G ++Y+ L G PF GE ++ + + P
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAE--FI 656
+ EA+ ++ LL++N RLG G EV+ HP+F +++W LL K E F
Sbjct: 243 Y----LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFK 298
Query: 657 PQLDDEEDTSYFDSRMER 674
P L EED S FDS+ R
Sbjct: 299 PLLQSEEDVSQFDSKFTR 316
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 177/292 (60%), Gaps = 25/292 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRH---KETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
+ F ++K++ G++G V+LV+ + RQ +AMK + K +L +R+++ + ERDI+
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVE 83
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
++PF+V ++ +F+T+ L L+++++ GGD + L + +FY AE LA+++L
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 143
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
HS GI++RDLKP+N+L+ GHIKLTDFGLSK ++ + K +S
Sbjct: 144 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKES------------IDHEKKAYS---FC 188
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPS 600
GT EY+APEV+ R+G+ + DWWS GV+++E L G +PF G+ +E + + P
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 248
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDRLGTG--GPHEVKEHPYFSNLDWNSLLR 650
+ EA+S++ L ++NP +RLG G G E+K H +FS +DWN L R
Sbjct: 249 ----FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYR 296
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 177/292 (60%), Gaps = 25/292 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRH---KETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
+ F ++K++ G++G V+LV+ + RQ +AMK + K +L +R+++ + ERDI+
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVE 82
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
++PF+V ++ +F+T+ L L+++++ GGD + L + +FY AE LA+++L
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
HS GI++RDLKP+N+L+ GHIKLTDFGLSK ++ + K +S
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKES------------IDHEKKAYS---FC 187
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPS 600
GT EY+APEV+ R+G+ + DWWS GV+++E L G +PF G+ +E + + P
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ 247
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDRLGTG--GPHEVKEHPYFSNLDWNSLLR 650
+ EA+S++ L ++NP +RLG G G E+K H +FS +DWN L R
Sbjct: 248 ----FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYR 295
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 170/313 (54%), Gaps = 24/313 (7%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF +IK+I GA+G V +V+ K T + +AMK + K ++ R + ERD++ D
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAETVLAVEYLHSY 483
++ ++ +F+ + HL LVM+Y GGD +LL K LP DMARFY E VLA++ +H
Sbjct: 151 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 210
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
VHRD+KPDN+L+ GHI+L DFG C D GTP
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFG--------------SCLKMNDDGTVQSSVAVGTP 256
Query: 544 EYIAPEVI--LRQG---YGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDD--I 596
+YI+PE++ + G YG DWWS+GV +YE L G PF+ E+ E + +N +
Sbjct: 257 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 316
Query: 597 EWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKAEFI 656
++PS + EAK +I L+ R RLG G + K+H +F L+W ++ +A +I
Sbjct: 317 QFPSHVT-DVSEEAKDLIQRLICSRER-RLGQNGIEDFKKHAFFEGLNWENIRNLEAPYI 374
Query: 657 PQLDDEEDTSYFD 669
P + DTS FD
Sbjct: 375 PDVSSPSDTSNFD 387
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 170/313 (54%), Gaps = 24/313 (7%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF +IK+I GA+G V +V+ K T + +AMK + K ++ R + ERD++ D
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAETVLAVEYLHSY 483
++ ++ +F+ + HL LVM+Y GGD +LL K LP DMARFY E VLA++ +H
Sbjct: 135 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 194
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
VHRD+KPDN+L+ GHI+L DFG C D GTP
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFG--------------SCLKMNDDGTVQSSVAVGTP 240
Query: 544 EYIAPEVI--LRQG---YGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDD--I 596
+YI+PE++ + G YG DWWS+GV +YE L G PF+ E+ E + +N +
Sbjct: 241 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 300
Query: 597 EWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKAEFI 656
++PS + EAK +I L+ R RLG G + K+H +F L+W ++ +A +I
Sbjct: 301 QFPSHVT-DVSEEAKDLIQRLICSRER-RLGQNGIEDFKKHAFFEGLNWENIRNLEAPYI 358
Query: 657 PQLDDEEDTSYFD 669
P + DTS FD
Sbjct: 359 PDVSSPSDTSNFD 371
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 181/328 (55%), Gaps = 35/328 (10%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF +++ + G++G V+L+R + + +AMK + K ++ Q+E ER ++S +P
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F++ M+ +F+ + + ++M+Y+EGG+ SLL+ + P +A+FY AE LA+EYLHS
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD 126
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I++RDLKP+N+L+ GHIK+TDFG +K YV GTP+
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAK-------------YVPDVTYXLC-----GTPD 168
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP---SE 601
YIAPEV+ + Y K +DWWS G+++YE L G PF+ + + +N ++ +P +E
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNE 228
Query: 602 DDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRHKAEF---I 656
D K +++ L+ ++ RLG G +VK HP+F + W LL E
Sbjct: 229 D-------VKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEP 281
Query: 657 PQLDDEEDTSYFDSRMER-YNHDI-GED 682
P + DTS FD E N+ + GED
Sbjct: 282 PIQQGQGDTSQFDKYPEEDINYGVQGED 309
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 177/313 (56%), Gaps = 24/313 (7%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF ++K+I GA+G V +V+ K + FAMK + K ++ R + ERD++ D+
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAETVLAVEYLHSY 483
++ T++ +F+ +L LVM+Y GGD +LL K LP +MARFY AE V+A++ +H
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL 194
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
VHRD+KPDN+L+ GHI+L DFG S + LM T GTP
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGT-------------VQSSVAVGTP 240
Query: 544 EYIAPEVI--LRQG---YGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN--DDI 596
+YI+PE++ + G YG DWWS+GV +YE L G PF+ E+ E + +N +
Sbjct: 241 DYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF 300
Query: 597 EWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKAEFI 656
++P++ + AK +I L+ RLG G + K+HP+FS +DW+++ +A +I
Sbjct: 301 QFPTQVT-DVSENAKDLIRRLICSREH-RLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYI 358
Query: 657 PQLDDEEDTSYFD 669
P++ DTS FD
Sbjct: 359 PEVSSPTDTSNFD 371
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 157/288 (54%), Gaps = 22/288 (7%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
DF + ++ G++G V L K T + +A+K + K+ ++ + +E E+ +++ D
Sbjct: 19 TDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDK 78
Query: 424 P-FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS 482
P F+ ++ F+T L VMEYV GGD ++ G A FY AE + + +LH
Sbjct: 79 PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHK 138
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
GI++RDLK DN+++ + GHIK+ DFG+ K +M T C GT
Sbjct: 139 RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC---------------GT 183
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSED 602
P+YIAPE+I Q YGK VDWW+ GV+LYE L G PF GE +ELF + ++ +P
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS- 242
Query: 603 DWPIQVEAKSIITDLLQQNPRDRLGTG--GPHEVKEHPYFSNLDWNSL 648
+ EA SI L+ ++P RLG G G +V+EH +F +DW L
Sbjct: 243 ---LSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKL 287
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 158/293 (53%), Gaps = 22/293 (7%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + ++ G++G V L K T + +A+K + K+ ++ + +E E+ +++ P
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 425 -FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
F+ ++ F+T L VMEYV GGD ++ G A FY AE + + +L S
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
GI++RDLK DN+++ + GHIK+ DFG+ K + T C GTP
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC---------------GTP 506
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
+YIAPE+I Q YGK VDWW+ GV+LYE L G PF GE +ELF + ++ +P
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS-- 564
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTG--GPHEVKEHPYFSNLDWNSLLRHKAE 654
+ EA +I L+ ++P RLG G G ++KEH +F +DW L R + +
Sbjct: 565 --MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQ 615
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 182/345 (52%), Gaps = 34/345 (9%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAER 415
K S + DF ++++I G+Y V LVR K+T + +AMK + K + ++ V E+
Sbjct: 12 KASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEK 71
Query: 416 DIMSFTDN-PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETV 474
+ N PF+V ++ F+T+ L V+EYV GGD ++ LP + ARFY AE
Sbjct: 72 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 131
Query: 475 LAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQF 534
LA+ YLH GI++RDLK DN+L+ + GHIKLTD+G+ K GL T C
Sbjct: 132 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--------- 182
Query: 535 SDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF----FGETPEE---- 586
GTP YIAPE++ + YG VDWW++GV+++E + G PF + P++
Sbjct: 183 ------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 236
Query: 587 -LFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSN 642
LF + I P + V+A S++ L ++P++RLG G +++ HP+F N
Sbjct: 237 YLFQVILEKQIRIPRS----MSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRN 292
Query: 643 LDWNSLLRHKA--EFIPQLDDEEDTSYFDSRMERYNHDIGEDTDE 685
+DW+ + + + F P + E FDS+ + D D+
Sbjct: 293 VDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNERVQLXPDDDD 337
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 186/347 (53%), Gaps = 35/347 (10%)
Query: 341 TSIESNSDSYCSKKD-KFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIK 399
+ IE ++ +++ K S + DF ++++I G+Y V LVR K+T + +AM+ + K
Sbjct: 28 SGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKK 87
Query: 400 NSLMLRNQMEQVFAERDIMSFTDN-PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT 458
+ ++ V E+ + N PF+V ++ F+T+ L V+EYV GGD ++
Sbjct: 88 ELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ 147
Query: 459 GPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSL 518
LP + ARFY AE LA+ YLH GI++RDLK DN+L+ + GHIKLTD+G+ K GL
Sbjct: 148 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 207
Query: 519 ATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
T C GTP YIAPE++ + YG VDWW++GV+++E + G P
Sbjct: 208 DTTSTFC---------------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 252
Query: 579 F----FGETPEE-----LFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLG-- 627
F + P++ LF + I P + V+A S++ L ++P++RLG
Sbjct: 253 FDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS----LSVKAASVLKSFLNKDPKERLGCH 308
Query: 628 -TGGPHEVKEHPYFSNLDWNSLLRHKA--EFIPQLDDEEDTSYFDSR 671
G +++ HP+F N+DW+ + + + F P + E FDS+
Sbjct: 309 PQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQ 355
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 158/293 (53%), Gaps = 22/293 (7%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + ++ G++G V L K T + +A+K + K+ ++ + +E E+ +++ P
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 425 -FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
F+ ++ F+T L VMEYV GGD ++ G A FY AE + + +L S
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
GI++RDLK DN+++ + GHIK+ DFG+ K + T C GTP
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC---------------GTP 185
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
+YIAPE+I Q YGK VDWW+ GV+LYE L G PF GE +ELF + ++ +P
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS-- 243
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTG--GPHEVKEHPYFSNLDWNSLLRHKAE 654
+ EA +I L+ ++P RLG G G ++KEH +F +DW L R + +
Sbjct: 244 --MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQ 294
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 175/323 (54%), Gaps = 34/323 (10%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN- 423
DF ++++I G+Y V LVR K+T + +AMK + K + ++ V E+ + N
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
PF+V ++ F+T+ L V+EYV GGD ++ LP + ARFY AE LA+ YLH
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 125
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
GI++RDLK DN+L+ + GHIKLTD+G+ K GL T C GTP
Sbjct: 126 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC---------------GTP 170
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF----FGETPEE-----LFAHTVND 594
YIAPE++ + YG VDWW++GV+++E + G PF + P++ LF +
Sbjct: 171 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 230
Query: 595 DIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSLLRH 651
I P + V+A S++ L ++P++RLG G +++ HP+F N+DW+ + +
Sbjct: 231 QIRIPRS----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQK 286
Query: 652 KA--EFIPQLDDEEDTSYFDSRM 672
+ F P + E FDS+
Sbjct: 287 QVVPPFKPNISGEFGLDNFDSQF 309
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 175/323 (54%), Gaps = 34/323 (10%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN- 423
DF ++++I G+Y V LVR K+T + +AMK + K + ++ V E+ + N
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
PF+V ++ F+T+ L V+EYV GGD ++ LP + ARFY AE LA+ YLH
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 129
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
GI++RDLK DN+L+ + GHIKLTD+G+ K GL T C GTP
Sbjct: 130 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC---------------GTP 174
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF----FGETPEE-----LFAHTVND 594
YIAPE++ + YG VDWW++GV+++E + G PF + P++ LF +
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 234
Query: 595 DIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSLLRH 651
I P + V+A S++ L ++P++RLG G +++ HP+F N+DW+ + +
Sbjct: 235 QIRIPRS----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQK 290
Query: 652 KA--EFIPQLDDEEDTSYFDSRM 672
+ F P + E FDS+
Sbjct: 291 QVVPPFKPNISGEFGLDNFDSQF 313
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 167/318 (52%), Gaps = 26/318 (8%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT 421
+DF ++K+I GA+ V +V+ K+T Q +AMK + K ++ R ++ ERD++
Sbjct: 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG 118
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP-LPADMARFYFAETVLAVEYL 480
D ++ ++ +F+ + +L LVMEY GGD +LL G +PA+MARFY AE V+A++ +
Sbjct: 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV 178
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
H G VHRD+KPDN+L+ GHI+L DFG C R
Sbjct: 179 HRLGYVHRDIKPDNILLDRCGHIRLADFG--------------SCLKLRADGTVRSLVAV 224
Query: 541 GTPEYIAPEVI-------LRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN 593
GTP+Y++PE++ YG DWW++GV YE G PF+ ++ E + V+
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH 284
Query: 594 --DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRH 651
+ + P D+ + EA+ I LL P RLG GG + + HP+F LDW+ L
Sbjct: 285 YKEHLSLPLVDE-GVPEEARDFIQRLLCP-PETRLGRGGAGDFRTHPFFFGLDWDGLRDS 342
Query: 652 KAEFIPQLDDEEDTSYFD 669
F P + DT FD
Sbjct: 343 VPPFTPDFEGATDTCNFD 360
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 169/310 (54%), Gaps = 23/310 (7%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM-SFTD 422
+DF +K+I G++G V L RHK +A+K + K +++ + + + + +ER+++
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS 482
+PF+V ++ SF+T L V++Y+ GG+ L+ ARFY AE A+ YLHS
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS 157
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
IV+RDLKP+N+L+ + GHI LTDFGL K + +T C GT
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC---------------GT 202
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSED 602
PEY+APEV+ +Q Y + VDWW +G +LYE L G PF+ E++ + +N ++
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN- 261
Query: 603 DWPIQVEAKSIITDLLQQNPRDRLGTGGPH-EVKEHPYFSNLDWNSLLRHKAE--FIPQL 659
I A+ ++ LLQ++ RLG E+K H +FS ++W+ L+ K F P +
Sbjct: 262 ---ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNV 318
Query: 660 DDEEDTSYFD 669
D +FD
Sbjct: 319 SGPNDLRHFD 328
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 176/320 (55%), Gaps = 35/320 (10%)
Query: 365 DFTVIKLISNGAYGSVYLVRH---KETRQRFAMKKIIKNSLMLRNQM-EQVFAERDIMS- 419
+F ++K++ GAYG V+LVR +T + +AMK + K +++ + + E ER ++
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+PF+VT++ +F+T+ L L+++Y+ GG+ + L + Y E VLA+E+
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEH 174
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYE-CYVERDAKQFSDKQ 538
LH GI++RD+K +N+L+ + GH+ LTDFGLSK + Y+ C
Sbjct: 175 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC------------- 221
Query: 539 VYGTPEYIAPEVILR--QGYGKPVDWWSMGVILYEFLVGCVPFF--GE--TPEELFAHTV 592
GT EY+AP+++ G+ K VDWWS+GV++YE L G PF GE + E+ +
Sbjct: 222 --GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 279
Query: 593 NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTG--GPHEVKEHPYFSNLDWNSLLR 650
+ +P E + AK +I LL ++P+ RLG G E+KEH +F ++W+ L
Sbjct: 280 KSEPPYPQE----MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAA 335
Query: 651 HK--AEFIPQLDDEEDTSYF 668
K A F P + DE D S F
Sbjct: 336 KKVPAPFKPVIRDELDVSNF 355
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 153/287 (53%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 199
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +FA + + ++P E +
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP-EKFF 258
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 259 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 153/287 (53%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 199
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +FA + + ++P E +
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP-EKFF 258
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 259 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 129
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 176
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 235
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 236 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 279
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 127
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 174
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 233
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 234 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 277
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 197
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 256
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 257 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 175
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 234
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 235 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 278
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 130
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 177
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 236
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 237 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 280
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 197
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 256
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 257 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANAFVGTAQ 197
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 256
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 257 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 200
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 259
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 260 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 303
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANSFVGTAQ 200
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 259
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 260 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 303
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 199
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 258
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 259 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 181
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 240
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 241 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 284
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 199
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 258
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 259 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 199
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 258
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 259 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANSFVGTAQ 196
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 255
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 256 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 299
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 196
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 255
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 256 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 299
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 151/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 204
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 263
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 264 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 307
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 151/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G ++ G RFY AE V A+EYLH G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANSFVGTAQ 199
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 258
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 259 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ +V L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 202
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P+ +
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAA-FF 261
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 262 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 305
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 151/287 (52%), Gaps = 20/287 (6%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF K++ G++ + L R T + +A+K + K ++ N++ V ERD+MS D+P
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F V +Y +F+ + L + Y + G+ ++ G RFY AE V A+EYLH G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP+N+L+ HI++TDFG +K+ + ++KQ GT +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKV-------------LSPESKQARANXFVGTAQ 197
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y++PE++ + K D W++G I+Y+ + G PF +F + + ++P E +
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP-EKFF 256
Query: 605 PIQVEAKSIITDLLQQNPRDRLG---TGGPHEVKEHPYFSNLDWNSL 648
P +A+ ++ LL + RLG G +K HP+F ++ W +L
Sbjct: 257 P---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 162/304 (53%), Gaps = 30/304 (9%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT 421
N + F +++ I G++G V +V+ +T++ +AMK + K + RN++ VF E IM
Sbjct: 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLH 481
++PF+V ++ SF+ ++ + +V++ + GGD L+ + + + E V+A++YL
Sbjct: 73 EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ 132
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+ I+HRD+KPDN+L+ GH+ +TDF ++ M + R+ + + + G
Sbjct: 133 NQRIIHRDMKPDNILLDEHGHVHITDFNIAAM-------------LPRETQITT---MAG 176
Query: 542 TPEYIAPEVILRQ---GYGKPVDWWSMGVILYEFLVGCVPFF--GETPEELFAHTVNDD- 595
T Y+APE+ + GY VDWWS+GV YE L G P+ T + HT
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV 236
Query: 596 IEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKA-- 653
+ +PS W E S++ LL+ NP R +V+ PY ++++W+++ + +
Sbjct: 237 VTYPSA--W--SQEMVSLLKKLLEPNPDQRFSQLS--DVQNFPYMNDINWDAVFQKRLIP 290
Query: 654 EFIP 657
FIP
Sbjct: 291 GFIP 294
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 150/301 (49%), Gaps = 36/301 (11%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT-- 421
NDF+V ++I G +G VY R +T + +AMK + K + ++ ER ++S
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 422 -DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
D PF+V M +F T L +++ + GGD L G RFY AE +L +E++
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 307
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
H+ +V+RDLKP N+L+ GH++++D GL A FS K+ +
Sbjct: 308 HNRFVVYRDLKPANILLDEHGHVRISDLGL--------------------ACDFSKKKPH 347
Query: 541 ---GTPEYIAPEVILRQ-GYGKPVDWWSMGVILYEFLVGCVPFFGETPE---ELFAHTVN 593
GT Y+APEV+ + Y DW+S+G +L++ L G PF + E+ T+
Sbjct: 348 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 407
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRH 651
+E P E +S++ LLQ++ RLG G EVKE P+F +LDW +
Sbjct: 408 MAVELPDS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 463
Query: 652 K 652
K
Sbjct: 464 K 464
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 150/301 (49%), Gaps = 36/301 (11%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT-- 421
NDF+V ++I G +G VY R +T + +AMK + K + ++ ER ++S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 422 -DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
D PF+V M +F T L +++ + GGD L G RFY AE +L +E++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
H+ +V+RDLKP N+L+ GH++++D GL A FS K+ +
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGL--------------------ACDFSKKKPH 348
Query: 541 ---GTPEYIAPEVILRQ-GYGKPVDWWSMGVILYEFLVGCVPFFGETPE---ELFAHTVN 593
GT Y+APEV+ + Y DW+S+G +L++ L G PF + E+ T+
Sbjct: 349 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 408
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRH 651
+E P E +S++ LLQ++ RLG G EVKE P+F +LDW +
Sbjct: 409 MAVELPDS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 652 K 652
K
Sbjct: 465 K 465
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 150/301 (49%), Gaps = 36/301 (11%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT-- 421
NDF+V ++I G +G VY R +T + +AMK + K + ++ ER ++S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 422 -DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
D PF+V M +F T L +++ + GGD L G RFY AE +L +E++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
H+ +V+RDLKP N+L+ GH++++D GL A FS K+ +
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGL--------------------ACDFSKKKPH 348
Query: 541 ---GTPEYIAPEVILRQ-GYGKPVDWWSMGVILYEFLVGCVPFFGETPE---ELFAHTVN 593
GT Y+APEV+ + Y DW+S+G +L++ L G PF + E+ T+
Sbjct: 349 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 408
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRH 651
+E P E +S++ LLQ++ RLG G EVKE P+F +LDW +
Sbjct: 409 MAVELPDS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 652 K 652
K
Sbjct: 465 K 465
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 150/301 (49%), Gaps = 36/301 (11%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT-- 421
NDF+V ++I G +G VY R +T + +AMK + K + ++ ER ++S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 422 -DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
D PF+V M +F T L +++ + GGD L G RFY AE +L +E++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
H+ +V+RDLKP N+L+ GH++++D GL A FS K+ +
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGL--------------------ACDFSKKKPH 348
Query: 541 ---GTPEYIAPEVILRQ-GYGKPVDWWSMGVILYEFLVGCVPFFGETPE---ELFAHTVN 593
GT Y+APEV+ + Y DW+S+G +L++ L G PF + E+ T+
Sbjct: 349 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 408
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSLLRH 651
+E P E +S++ LLQ++ RLG G EVKE P+F +LDW +
Sbjct: 409 MAVELPDS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 652 K 652
K
Sbjct: 465 K 465
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 134/278 (48%), Gaps = 23/278 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF V L+ G++ VY T A+K I K ++ +++V E I +P
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKN-TGPLPADMARFYFAETVLAVEYLHSY 483
++ +Y FE ++ LV+E G+ LKN P + AR + + + + YLHS+
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
GI+HRDL NLL+T +IK+ DFGL+ M + C GTP
Sbjct: 132 GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC---------------GTP 176
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
YI+PE+ R +G D WS+G + Y L+G PF +T + V D E PS
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS--- 233
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ +EAK +I LL++NP DRL V +HP+ S
Sbjct: 234 -FLSIEAKDLIHQLLRRNPADRLSLS---SVLDHPFMS 267
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 136/268 (50%), Gaps = 33/268 (12%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
F ++++ +GA+ V+LV+ + T + FA+K I K+ + +E A ++ +
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIA---VLKKIKHEN 67
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
+VT+ +E+ H LVM+ V GG+ + G A + + AV+YLH GI
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGI 127
Query: 486 VHRDLKPDNLLITA---LGHIKLTDFGLSKM---GLMSLATNLYECYVERDAKQFSDKQV 539
VHRDLKP+NLL I +TDFGLSKM G+MS A
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC------------------- 168
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVND--DIE 597
GTP Y+APEV+ ++ Y K VD WS+GVI Y L G PF+ ET +LF + E
Sbjct: 169 -GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFE 227
Query: 598 WPSEDDWPIQVEAKSIITDLLQQNPRDR 625
P DD I AK I LL+++P +R
Sbjct: 228 SPFWDD--ISESAKDFICHLLEKDPNER 253
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 22/292 (7%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT 421
+N F +++ G +G V + + T + +A KK+ K + R E+ I+
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLAVEY 479
++ FVV++ ++ETK LCLV+ + GGD + + G P A FY AE +E
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLED 301
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LH IV+RDLKP+N+L+ GHI+++D GL+ V Q +V
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLA---------------VHVPEGQTIKGRV 346
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDI-EW 598
GT Y+APEV+ + Y DWW++G +LYE + G P F + +++ V + E
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP-FQQRKKKIKREEVERLVKEV 404
Query: 599 PSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSL 648
P E +A+S+ + LL ++P +RLG G EVKEHP F L++ L
Sbjct: 405 PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRL 456
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 22/292 (7%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT 421
+N F +++ G +G V + + T + +A KK+ K + R E+ I+
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLAVEY 479
++ FVV++ ++ETK LCLV+ + GGD + + G P A FY AE +E
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLED 301
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LH IV+RDLKP+N+L+ GHI+++D GL+ V Q +V
Sbjct: 302 LHRERIVYRDLKPENILLDDHGHIRISDLGLA---------------VHVPEGQTIKGRV 346
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDI-EW 598
GT Y+APEV+ + Y DWW++G +LYE + G P F + +++ V + E
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP-FQQRKKKIKREEVERLVKEV 404
Query: 599 PSEDDWPIQVEAKSIITDLLQQNPRDRLGT--GGPHEVKEHPYFSNLDWNSL 648
P E +A+S+ + LL ++P +RLG G EVKEHP F L++ L
Sbjct: 405 PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRL 456
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 136/276 (49%), Gaps = 24/276 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+DF +++ + G +G+VYL R K+ + A+K + K+ L Q+ E +I S +
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
P ++ MY F +K + L++E+ G+ L+ G + + E A+ Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
++HRD+KP+NLL+ G +K+ DFG S A + + GT
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSV-----------------HAPSLRRRXMCGTL 176
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
+Y+ PE+I + + + VD W GV+ YEFLVG PF + E VN D+++P
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF-- 234
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
+ +K +I+ LL+ +P RL G V EHP+
Sbjct: 235 --LSDGSKDLISKLLRYHPPQRLPLKG---VMEHPW 265
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 146/308 (47%), Gaps = 53/308 (17%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLML------------------- 404
N +T+ I G+YG V L ++ +AMK + K L+
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 405 ----RNQMEQVFAERDIMSFTDNPFVVTMYCSFE--TKKHLCLVMEYVEGGDCASLLKNT 458
R +EQV+ E I+ D+P VV + + + HL +V E V G +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-PTL 131
Query: 459 GPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSK--MGLM 516
PL D ARFYF + + +EYLH I+HRD+KP NLL+ GHIK+ DFG+S G
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191
Query: 517 SLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI--LRQGY-GKPVDWWSMGVILYEFL 573
+L +N GTP ++APE + R+ + GK +D W+MGV LY F+
Sbjct: 192 ALLSN-----------------TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV 234
Query: 574 VGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHE 633
G PF E L + + +E+P + D I + K +IT +L +NP R+ E
Sbjct: 235 FGQCPFMDERIMCLHSKIKSQALEFPDQPD--IAEDLKDLITRMLDKNPESRIVV---PE 289
Query: 634 VKEHPYFS 641
+K HP+ +
Sbjct: 290 IKLHPWVT 297
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 148/297 (49%), Gaps = 29/297 (9%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT 421
E+ F +++ G +G V+ + K T + +A KK+ K L R + E+ I++
Sbjct: 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG----PLPADMARFYFAETVLAV 477
+ F+V++ +FETK LCLVM + GGD + N A FY A+ V +
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
E+LH I++RDLKP+N+L+ G+++++D GL+ VE A Q K
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA---------------VELKAGQTKTK 347
Query: 538 QVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF--FGETPE--ELFAHTVN 593
GTP ++APE++L + Y VD++++GV LYE + PF GE E EL +
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLG--TGGPHEVKEHPYFSNLDWNSL 648
+ +P + +K LLQ++P RLG G ++ HP F ++ W L
Sbjct: 408 QAVTYPDK----FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 137/286 (47%), Gaps = 32/286 (11%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT 421
+ + + +K I +G +G L+R K T++ A+K I + + + N ++ R +
Sbjct: 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLR--- 74
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLH 481
+P +V T HL ++MEY GG+ + N G D ARF+F + + V Y H
Sbjct: 75 -HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH 133
Query: 482 SYGIVHRDLKPDNLLI--TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
S I HRDLK +N L+ + +K+ DFG SK ++ K
Sbjct: 134 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL----------------HSQPKST 177
Query: 540 YGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPFFGETPEEL--FAHTVND-- 594
GTP YIAPEV+LRQ Y GK D WS GV LY LVG PF E PEE + T+
Sbjct: 178 VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF--EDPEEPRDYRKTIQRIL 235
Query: 595 DIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
+++ DD I E +I+ + +P R+ E+K H +F
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPATRISIP---EIKTHSWF 278
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 148/297 (49%), Gaps = 29/297 (9%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT 421
E+ F +++ G +G V+ + K T + +A KK+ K L R + E+ I++
Sbjct: 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG----PLPADMARFYFAETVLAV 477
+ F+V++ +FETK LCLVM + GGD + N A FY A+ V +
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
E+LH I++RDLKP+N+L+ G+++++D GL+ VE A Q K
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA---------------VELKAGQTKTK 347
Query: 538 QVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF--FGETPE--ELFAHTVN 593
GTP ++APE++L + Y VD++++GV LYE + PF GE E EL +
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLG--TGGPHEVKEHPYFSNLDWNSL 648
+ +P + +K LLQ++P RLG G ++ HP F ++ W L
Sbjct: 408 QAVTYPDK----FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 148/297 (49%), Gaps = 29/297 (9%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT 421
E+ F +++ G +G V+ + K T + +A KK+ K L R + E+ I++
Sbjct: 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG----PLPADMARFYFAETVLAV 477
+ F+V++ +FETK LCLVM + GGD + N A FY A+ V +
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
E+LH I++RDLKP+N+L+ G+++++D GL+ VE A Q K
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA---------------VELKAGQTKTK 347
Query: 538 QVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF--FGETPE--ELFAHTVN 593
GTP ++APE++L + Y VD++++GV LYE + PF GE E EL +
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLG--TGGPHEVKEHPYFSNLDWNSL 648
+ +P + +K LLQ++P RLG G ++ HP F ++ W L
Sbjct: 408 QAVTYPDK----FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 148/297 (49%), Gaps = 29/297 (9%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT 421
E+ F +++ G +G V+ + K T + +A KK+ K L R + E+ I++
Sbjct: 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG----PLPADMARFYFAETVLAV 477
+ F+V++ +FETK LCLVM + GGD + N A FY A+ V +
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
E+LH I++RDLKP+N+L+ G+++++D GL+ VE A Q K
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA---------------VELKAGQTKTK 347
Query: 538 QVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF--FGETPE--ELFAHTVN 593
GTP ++APE++L + Y VD++++GV LYE + PF GE E EL +
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLG--TGGPHEVKEHPYFSNLDWNSL 648
+ +P + +K LLQ++P RLG G ++ HP F ++ W L
Sbjct: 408 QAVTYPDK----FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G+ L+ Y E A+ Y HS
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L C GT +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--C---------------GTLD 176
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P D+
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DF 233
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 234 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 266
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 35 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 94
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L C GT +
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--C---------------GTLD 197
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P D+
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DF 254
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 255 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 287
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 24/276 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+DF + + + G +G+VYL R K+ + A+K + K+ L Q+ E +I S +
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
P ++ MY F +K + L++E+ G+ L+ G + + E A+ Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
++HRD+KP+NLL+ G +K+ DFG S A + + GT
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWSV-----------------HAPSLRRRXMCGTL 177
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
+Y+ PE+I + + + VD W GV+ YEFLVG PF + E VN D+++P
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF-- 235
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
+ +K +I+ LL+ +P RL G V EHP+
Sbjct: 236 --LSDGSKDLISKLLRYHPPQRLPLKG---VMEHPW 266
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 26 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 85
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 86 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L C GT +
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--C---------------GTLD 188
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P D+
Sbjct: 189 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DF 245
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 246 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 278
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 141/293 (48%), Gaps = 28/293 (9%)
Query: 349 SYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQM 408
S+ SKK +++ DF + + + G +G+VYL R K+++ A+K + K L
Sbjct: 2 SHMSKKRQWAL----EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE 57
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
Q+ E +I S +P ++ +Y F + L++EY G L+
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 117
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
Y E A+ Y HS ++HRD+KP+NLL+ + G +K+ DFG S S T+L C
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL--C--- 172
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
GT +Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E +
Sbjct: 173 ------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ +P + A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 221 KRISRVEFTFPDF----VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 266
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 24/276 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+DF + + + G +G+VYL R K+ + A+K + K+ L Q+ E +I S +
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
P ++ MY F +K + L++E+ G+ L+ G + + E A+ Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
++HRD+KP+NLL+ G +K+ DFG S A + + GT
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSV-----------------HAPSLRRRXMCGTL 176
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
+Y+ PE+I + + + VD W GV+ YEFLVG PF + E VN D+++P
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF-- 234
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
+ +K +I+ LL+ +P RL G V EHP+
Sbjct: 235 --LSDGSKDLISKLLRYHPPQRLPLKG---VMEHPW 265
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 134/266 (50%), Gaps = 22/266 (8%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P+ ++ ++K I G + V L RH T + A+K II + + + ++++F E IM
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK-IIDKTQLNSSSLQKLFREVRIMKV 69
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
++P +V ++ ET+K L LVMEY GG+ L G + AR F + V AV+Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
H IVHRDLK +NLL+ A +IK+ DFG S N + + DA
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS---------NEFTFGNKLDA-------FC 173
Query: 541 GTPEYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
G P Y APE+ + Y P VD WS+GVILY + G +PF G+ +EL + P
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDR 625
+ + + ++++ L NP R
Sbjct: 234 ----FYMSTDCENLLKKFLILNPSKR 255
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 139/282 (49%), Gaps = 27/282 (9%)
Query: 345 SNSDSYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLML 404
NS + C+ + P+ ++ ++K I G + V L RH T + A+K II + +
Sbjct: 1 GNSIASCA-----DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIK-IIDKTQLN 54
Query: 405 RNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPAD 464
++++F E IM ++P +V ++ ET+K L L+MEY GG+ L G +
Sbjct: 55 PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK 114
Query: 465 MARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYE 524
AR F + V AV+Y H IVHRDLK +NLL+ A +IK+ DFG S N +
Sbjct: 115 EARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---------NEFT 165
Query: 525 CYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGET 583
+ DA G P Y APE+ + Y P VD WS+GVILY + G +PF G+
Sbjct: 166 VGGKLDA-------FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
Query: 584 PEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
+EL + P + + + ++++ L NP R
Sbjct: 219 LKELRERVLRGKYRIP----FYMSTDCENLLKRFLVLNPIKR 256
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 135/268 (50%), Gaps = 26/268 (9%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P+ ++ ++K I G + V L RH T + A++ II + + + ++++F E IM
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVR-IIDKTQLNSSSLQKLFREVRIMKV 69
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
++P +V ++ ET+K L LVMEY GG+ L G + AR F + V AV+Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK--Q 538
H IVHRDLK +NLL+ A +IK+ DFG S + F +K +
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS------------------NEFTFGNKLDE 171
Query: 539 VYGTPEYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
G+P Y APE+ + Y P VD WS+GVILY + G +PF G+ +EL +
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 598 WPSEDDWPIQVEAKSIITDLLQQNPRDR 625
P + + + ++++ L NP R
Sbjct: 232 IP----FYMSTDCENLLKKFLILNPSKR 255
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 134/268 (50%), Gaps = 26/268 (9%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P+ ++ ++K I G + V L RH T + A+K II + + + ++++F E IM
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK-IIDKTQLNSSSLQKLFREVRIMKV 69
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
++P +V ++ ET+K L LVMEY GG+ L G + AR F + V AV+Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK--Q 538
H IVHRDLK +NLL+ A +IK+ DFG S + F +K
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS------------------NEFTFGNKLDT 171
Query: 539 VYGTPEYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
G+P Y APE+ + Y P VD WS+GVILY + G +PF G+ +EL +
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 598 WPSEDDWPIQVEAKSIITDLLQQNPRDR 625
P + + + ++++ L NP R
Sbjct: 232 IP----FYMSTDCENLLKKFLILNPSKR 255
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 134/268 (50%), Gaps = 26/268 (9%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P+ ++ ++K I G + V L RH T + A+K II + + + ++++F E IM
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK-IIDKTQLNSSSLQKLFREVRIMKV 69
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
++P +V ++ ET+K L LVMEY GG+ L G + AR F + V AV+Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK--Q 538
H IVHRDLK +NLL+ A +IK+ DFG S + F +K
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS------------------NEFTFGNKLDT 171
Query: 539 VYGTPEYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
G+P Y APE+ + Y P VD WS+GVILY + G +PF G+ +EL +
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 598 WPSEDDWPIQVEAKSIITDLLQQNPRDR 625
P + + + ++++ L NP R
Sbjct: 232 IP----FYMSTDCENLLKKFLILNPSKR 255
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 133/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L C GT +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--C---------------GTLD 176
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE I + + + VD WS+GV+ YEFLVG PF T +E + + +P D+
Sbjct: 177 YLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DF 233
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 234 -VTEGARDLISRLLKHNPSQRPXL---REVLEHPWIT 266
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T+L C GT +
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL--C---------------GTLD 172
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 229
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 230 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 262
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T+L C GT +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL--C---------------GTLD 171
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 228
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 229 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 261
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L C GT +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL--C---------------GTLD 171
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 228
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 229 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 261
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L C GT +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--C---------------GTLD 176
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P D+
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DF 233
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 234 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 266
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T+L C GT +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL--C---------------GTLD 171
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 228
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 229 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 261
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L C GT +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--C---------------GTLD 171
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 228
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 229 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L C GT +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--C---------------GTLD 174
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P D+
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DF 231
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 232 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 264
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P+ ++ ++K I G + V L RH T + A+K II + + ++++F E IM
Sbjct: 9 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIK-IIDKTQLNPTSLQKLFREVRIMKI 67
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
++P +V ++ ET+K L L+MEY GG+ L G + AR F + V AV+Y
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYC 127
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
H IVHRDLK +NLL+ A +IK+ DFG S E V F
Sbjct: 128 HQKRIVHRDLKAENLLLDADMNIKIADFGFSN-----------EFTVGGKLDTFC----- 171
Query: 541 GTPEYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
G+P Y APE+ + Y P VD WS+GVILY + G +PF G+ +EL + P
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 231
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDR 625
+ + + ++++ L NP R
Sbjct: 232 ----FYMSTDCENLLKRFLVLNPIKR 253
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 134/268 (50%), Gaps = 26/268 (9%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P+ ++ ++K I G + V L RH T + A++ II + + + ++++F E IM
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVR-IIDKTQLNSSSLQKLFREVRIMKV 69
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
++P +V ++ ET+K L LVMEY GG+ L G + AR F + V AV+Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK--Q 538
H IVHRDLK +NLL+ A +IK+ DFG S + F +K
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFS------------------NEFTFGNKLDT 171
Query: 539 VYGTPEYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
G+P Y APE+ + Y P VD WS+GVILY + G +PF G+ +EL +
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 598 WPSEDDWPIQVEAKSIITDLLQQNPRDR 625
P + + + ++++ L NP R
Sbjct: 232 IP----FYMSTDCENLLKKFLILNPSKR 255
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 134/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 35 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 94
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S +L C GT +
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL--C---------------GTLD 197
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P D+
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DF 254
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 255 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 287
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 141/283 (49%), Gaps = 40/283 (14%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLR-NQMEQVFAERDIMSFTDNPFVVTM 429
++ GA+ V L K T++ A+K I K +L + ME A ++ +P +V +
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA---VLHKIKHPNIVAL 81
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPA-DMARFYFAETVLAVEYLHSYGIVHR 488
+E+ HL L+M+ V GG+ + G D +R F + + AV+YLH GIVHR
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF-QVLDAVKYLHDLGIVHR 140
Query: 489 DLKPDNLLITAL---GHIKLTDFGLSKM----GLMSLATNLYECYVERDAKQFSDKQVYG 541
DLKP+NLL +L I ++DFGLSKM ++S A G
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC--------------------G 180
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEW--P 599
TP Y+APEV+ ++ Y K VD WS+GVI Y L G PF+ E +LF + + E+ P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
DD I AK I L++++P R + +HP+ +
Sbjct: 241 YWDD--ISDSAKDFIRHLMEKDPEKRFTC---EQALQHPWIAG 278
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 141/283 (49%), Gaps = 40/283 (14%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLR-NQMEQVFAERDIMSFTDNPFVVTM 429
++ GA+ V L K T++ A+K I K +L + ME A ++ +P +V +
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA---VLHKIKHPNIVAL 81
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPA-DMARFYFAETVLAVEYLHSYGIVHR 488
+E+ HL L+M+ V GG+ + G D +R F + + AV+YLH GIVHR
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF-QVLDAVKYLHDLGIVHR 140
Query: 489 DLKPDNLLITAL---GHIKLTDFGLSKM----GLMSLATNLYECYVERDAKQFSDKQVYG 541
DLKP+NLL +L I ++DFGLSKM ++S A G
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC--------------------G 180
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEW--P 599
TP Y+APEV+ ++ Y K VD WS+GVI Y L G PF+ E +LF + + E+ P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
DD I AK I L++++P R + +HP+ +
Sbjct: 241 YWDD--ISDSAKDFIRHLMEKDPEKRFTC---EQALQHPWIAG 278
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 141/283 (49%), Gaps = 40/283 (14%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLR-NQMEQVFAERDIMSFTDNPFVVTM 429
++ GA+ V L K T++ A+K I K +L + ME A ++ +P +V +
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIA---VLHKIKHPNIVAL 81
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPA-DMARFYFAETVLAVEYLHSYGIVHR 488
+E+ HL L+M+ V GG+ + G D +R F + + AV+YLH GIVHR
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF-QVLDAVKYLHDLGIVHR 140
Query: 489 DLKPDNLLITAL---GHIKLTDFGLSKM----GLMSLATNLYECYVERDAKQFSDKQVYG 541
DLKP+NLL +L I ++DFGLSKM ++S A G
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC--------------------G 180
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEW--P 599
TP Y+APEV+ ++ Y K VD WS+GVI Y L G PF+ E +LF + + E+ P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
DD I AK I L++++P R + +HP+ +
Sbjct: 241 YWDD--ISDSAKDFIRHLMEKDPEKRFTC---EQALQHPWIAG 278
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 133/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 14 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 73
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G+ L+ Y E A+ Y HS
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S L GT +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL-----------------XGTLD 176
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P D+
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DF 233
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 234 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 266
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L GT +
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTL-----------------SGTLD 172
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P D+
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DF 229
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 230 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 262
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 8 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 67
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 68 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 127
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L C GT +
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--C---------------GTLD 170
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 171 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 227
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 228 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 260
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L C GT +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--C---------------GTLD 174
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 231
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 232 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 264
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 141/283 (49%), Gaps = 40/283 (14%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLR-NQMEQVFAERDIMSFTDNPFVVTM 429
++ GA+ V L K T++ A+K I K +L + ME A ++ +P +V +
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA---VLHKIKHPNIVAL 81
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPA-DMARFYFAETVLAVEYLHSYGIVHR 488
+E+ HL L+M+ V GG+ + G D +R F + + AV+YLH GIVHR
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF-QVLDAVKYLHDLGIVHR 140
Query: 489 DLKPDNLLITAL---GHIKLTDFGLSKM----GLMSLATNLYECYVERDAKQFSDKQVYG 541
DLKP+NLL +L I ++DFGLSKM ++S A G
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC--------------------G 180
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEW--P 599
TP Y+APEV+ ++ Y K VD WS+GVI Y L G PF+ E +LF + + E+ P
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSP 240
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
DD I AK I L++++P R + +HP+ +
Sbjct: 241 YWDD--ISDSAKDFIRHLMEKDPEKRFTC---EQALQHPWIAG 278
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 13 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 132
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L C GT +
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--C---------------GTLD 175
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 232
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 233 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 265
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L C GT +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL--C---------------GTLD 171
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 228
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 229 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 261
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 134/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 11 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 70
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ +FG S S T L C GT +
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL--C---------------GTLD 173
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P D+
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DF 230
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 231 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 263
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S RD + GT +
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----------RRDT-------LCGTLD 172
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 229
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 230 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 262
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 11 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 70
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S L C GT +
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL--C---------------GTLD 173
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P D+
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DF 230
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 231 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 263
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 136/286 (47%), Gaps = 36/286 (12%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
F + + GA+ V L K T + FA+K I K +L + + + E ++ +
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL--KGKESSIENEIAVLRKIKHEN 81
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
+V + +E+ HL LVM+ V GG+ + G A + + AV YLH GI
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 486 VHRDLKPDNLLITAL---GHIKLTDFGLSKM----GLMSLATNLYECYVERDAKQFSDKQ 538
VHRDLKP+NLL + I ++DFGLSKM +MS A
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTAC------------------ 183
Query: 539 VYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEW 598
GTP Y+APEV+ ++ Y K VD WS+GVI Y L G PF+ E +LF + + E+
Sbjct: 184 --GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEF 241
Query: 599 --PSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
P DD I AK I +L++++P R + HP+ +
Sbjct: 242 DSPYWDD--ISDSAKDFIRNLMEKDPNKRYTC---EQAARHPWIAG 282
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 137/282 (48%), Gaps = 32/282 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+ ++K I +G +G L+R K++ + A+K I + + N ++ R + +P
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLR----HPN 76
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
+V T HL +VMEY GG+ + N G D ARF+F + + V Y H+ +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 486 VHRDLKPDNLLI--TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
HRDLK +N L+ + +K+ DFG SK ++ K GTP
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL----------------HSQPKSTVGTP 180
Query: 544 EYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPFFGETPEEL--FAHTVND--DIEW 598
YIAPEV+L++ Y GK D WS GV LY LVG PF E PEE F T++ ++++
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPEEPKNFRKTIHRILNVQY 238
Query: 599 PSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
D I E + +I+ + +P R+ E++ H +F
Sbjct: 239 AIPDYVHISPECRHLISRIFVADPAKRISIP---EIRNHEWF 277
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ +FG S S T L C GT +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL--C---------------GTLD 174
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 231
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 232 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 264
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 132/265 (49%), Gaps = 26/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
++ ++K I G + V L RH T + A+K II + + + ++++F E IM ++
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVK-IIDKTQLNSSSLQKLFREVRIMKVLNH 65
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
P +V ++ ET+K L LVMEY GG+ L G + AR F + V AV+Y H
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK--QVYG 541
IVHRDLK +NLL+ A +IK+ DFG S + F +K G
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFS------------------NEFTFGNKLDTFCG 167
Query: 542 TPEYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPS 600
+P Y APE+ + Y P VD WS+GVILY + G +PF G+ +EL + P
Sbjct: 168 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP- 226
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ + + ++++ L NP R
Sbjct: 227 ---FYMSTDCENLLKKFLILNPSKR 248
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S L C GT +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL--C---------------GTLD 174
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P D+
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP---DF 231
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 232 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 264
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 131/277 (47%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+ + A+K + K L Q+ E +I S +P
Sbjct: 6 DFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 65
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 125
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L C GT +
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--C---------------GTLD 168
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 225
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 226 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 258
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 131/275 (47%), Gaps = 24/275 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R ++++ A+K + K L Q+ E +I S +P
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S T L C GT +
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTL--C---------------GTLD 175
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDF--- 232
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
+ A+ +I+ LL+ N RL EV EHP+
Sbjct: 233 -VTEGARDLISRLLKHNASQRLTLA---EVLEHPW 263
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 117/228 (51%), Gaps = 18/228 (7%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P+ ++ + K I G + V L RH T + A+K II + + ++++F E IM
Sbjct: 12 PHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVK-IIDKTQLNPTSLQKLFREVRIMKI 70
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
++P +V ++ ET+K L LVMEY GG+ L G + AR F + V AV+Y
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 130
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
H IVHRDLK +NLL+ +IK+ DFG S E V F
Sbjct: 131 HQKYIVHRDLKAENLLLDGDMNIKIADFGFSN-----------EFTVGNKLDTFC----- 174
Query: 541 GTPEYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEEL 587
G+P Y APE+ + Y P VD WS+GVILY + G +PF G+ +EL
Sbjct: 175 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 222
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 135/282 (47%), Gaps = 32/282 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+ ++K I G +G L+R K+ + A+K I + + N ++ R + +P
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLR----HPN 76
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
+V T HL +VMEY GG+ + N G D ARF+F + + V Y H+ +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQV 136
Query: 486 VHRDLKPDNLLI--TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
HRDLK +N L+ + +K+ DFG SK ++ K GTP
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSKASVL----------------HSQPKSAVGTP 180
Query: 544 EYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPFFGETPEEL--FAHTVND--DIEW 598
YIAPEV+L++ Y GK D WS GV LY LVG PF E PEE F T++ ++++
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPEEPKNFRKTIHRILNVQY 238
Query: 599 PSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
D I E + +I+ + +P R+ E++ H +F
Sbjct: 239 AIPDYVHISPECRHLISRIFVADPAKRISIP---EIRNHEWF 277
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 137/282 (48%), Gaps = 32/282 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+ ++K I +G +G L+R K++ + A+K I + + N ++ R + +P
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR----HPN 75
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
+V T HL +VMEY GG+ + N G D ARF+F + + V Y H+ +
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 135
Query: 486 VHRDLKPDNLLI--TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
HRDLK +N L+ + +K+ DFG SK ++ K GTP
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL----------------HSQPKSTVGTP 179
Query: 544 EYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPFFGETPEEL--FAHTVND--DIEW 598
YIAPEV+L++ Y GK D WS GV LY LVG PF E PEE F T++ ++++
Sbjct: 180 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPEEPKNFRKTIHRILNVQY 237
Query: 599 PSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
D I E + +I+ + +P R+ E++ H +F
Sbjct: 238 AIPDYVHISPECRHLISRIFVADPAKRISIP---EIRNHEWF 276
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 131/277 (47%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S L C GT +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL--C---------------GTLD 171
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 228
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 229 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 261
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S +L C GT +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL--C---------------GTLD 174
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 231
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 232 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 264
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 131/277 (47%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S L C GT +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL--C---------------GTLD 174
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 231
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 232 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 264
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 131/277 (47%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K+++ A+K + K L Q+ E +I S +P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S L C GT +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL--C---------------GTLD 171
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--- 228
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 229 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 261
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 131/275 (47%), Gaps = 24/275 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R ++++ A+K + K L Q+ E +I S +P
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S RD + GT +
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----------RRDT-------LCGTLD 175
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T +E + + +P
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDF--- 232
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
+ A+ +I+ LL+ N RL EV EHP+
Sbjct: 233 -VTEGARDLISRLLKHNASQRLTLA---EVLEHPW 263
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 369 IKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVT 428
+K + +GAYG V L R K T A+K II+ + + + ++ E ++ D+P ++
Sbjct: 42 VKKLGSGAYGEVLLCRDKVTHVERAIK-IIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMK 100
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
+Y FE K++ LVME +GG+ + + A + + V YLH + IVHR
Sbjct: 101 LYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHR 160
Query: 489 DLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
DLKP+NLL+ + IK+ DFGLS + E K K+ GT Y
Sbjct: 161 DLKPENLLLESKEKDALIKIVDFGLSAV-------------FENQKKM---KERLGTAYY 204
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWP 605
IAPEV LR+ Y + D WS+GVIL+ L G PF G+T +E+ + S +
Sbjct: 205 IAPEV-LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKN 263
Query: 606 IQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
+ AK +I +LQ + + R+ + EHP+ +
Sbjct: 264 VSEGAKDLIKQMLQFDSQRRISA---QQALEHPWIKEM 298
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 130/277 (46%), Gaps = 24/277 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
DF + + + G +G+VYL R K ++ A+K + K L Q+ E +I S +P
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ +Y F + L++EY G L+ Y E A+ Y HS
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK 128
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
++HRD+KP+NLL+ + G +K+ DFG S S L C GT +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL--C---------------GTLD 171
Query: 545 YIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW 604
Y+ PE+I + + + VD WS+GV+ YEFLVG PF T ++ + + +P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDF--- 228
Query: 605 PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ A+ +I+ LL+ NP R EV EHP+ +
Sbjct: 229 -VTEGARDLISRLLKHNPSQRPML---REVLEHPWIT 261
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 130/266 (48%), Gaps = 22/266 (8%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P+ ++ ++K I G + V L RH T + A+K II + + + ++++F E I
Sbjct: 11 PHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK-IIDKTQLNSSSLQKLFREVRIXKV 69
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
++P +V ++ ET+K L LV EY GG+ L G AR F + V AV+Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYC 129
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
H IVHRDLK +NLL+ A +IK+ DFG S N + + DA
Sbjct: 130 HQKFIVHRDLKAENLLLDADXNIKIADFGFS---------NEFTFGNKLDA-------FC 173
Query: 541 GTPEYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
G P Y APE+ + Y P VD WS+GVILY + G +PF G+ +EL + P
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDR 625
+ + ++++ L NP R
Sbjct: 234 ----FYXSTDCENLLKKFLILNPSKR 255
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 136/282 (48%), Gaps = 32/282 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+ ++K I +G +G L+R K++ + A+K I + + N ++ R + +P
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR----HPN 76
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
+V T HL +VMEY GG+ + N G D ARF+F + + V Y H+ +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 486 VHRDLKPDNLLI--TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
HRDLK +N L+ + +K+ FG SK ++ K GTP
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVL----------------HSQPKSTVGTP 180
Query: 544 EYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPFFGETPEEL--FAHTVND--DIEW 598
YIAPEV+L++ Y GK D WS GV LY LVG PF E PEE F T++ ++++
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPEEPKNFRKTIHRILNVQY 238
Query: 599 PSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
D I E + +I+ + +P R+ E++ H +F
Sbjct: 239 AIPDYVHISPECRHLISRIFVADPAKRISIP---EIRNHEWF 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 136/282 (48%), Gaps = 32/282 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+ ++K I +G +G L+R K++ + A+K I + + N ++ R + +P
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR----HPN 76
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
+V T HL +VMEY GG+ + N G D ARF+F + + V Y H+ +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 486 VHRDLKPDNLLI--TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
HRDLK +N L+ + +K+ FG SK ++ K GTP
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVL----------------HSQPKDTVGTP 180
Query: 544 EYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPFFGETPEEL--FAHTVND--DIEW 598
YIAPEV+L++ Y GK D WS GV LY LVG PF E PEE F T++ ++++
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPEEPKNFRKTIHRILNVQY 238
Query: 599 PSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
D I E + +I+ + +P R+ E++ H +F
Sbjct: 239 AIPDYVHISPECRHLISRIFVADPAKRISIP---EIRNHEWF 277
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 152/306 (49%), Gaps = 28/306 (9%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMK--KIIKNSLMLRNQMEQVFAERDIMSF 420
E+ + + ++I GA+ V ++ET Q+FA+K + K + E + E I
Sbjct: 23 EDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGD-CASLLK--NTGPLPAD-MARFYFAETVLA 476
+P +V + ++ + L +V E+++G D C ++K + G + ++ +A Y + + A
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGH---IKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
+ Y H I+HRD+KP+N+L+ + + +KL DFG+ A L E + +
Sbjct: 143 LRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGV--------AIQLGESGLVAGGR- 193
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN 593
GTP ++APEV+ R+ YGKPVD W GVIL+ L GC+PF+G T E LF +
Sbjct: 194 ------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIK 246
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKA 653
+ I AK ++ +L +P +R+ +E HP+ D + H
Sbjct: 247 GKYKMNPRQWSHISESAKDLVRRMLMLDPAERITV---YEALNHPWLKERDRYAYKIHLP 303
Query: 654 EFIPQL 659
E + QL
Sbjct: 304 ETVEQL 309
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 23/275 (8%)
Query: 369 IKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVT 428
+K + +GAYG V L + K T A+K I K+S+ + + E ++ D+P ++
Sbjct: 9 VKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 68
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
+Y FE K++ LVME GG+ + A + + YLH + IVHR
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHR 128
Query: 489 DLKPDNLLITALGH---IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
DLKP+NLL+ + IK+ DFGLS + E K K+ GT Y
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGLS-------------AHFEVGGKM---KERLGTAYY 172
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWP 605
IAPEV LR+ Y + D WS GVILY L G PF G+T +E+ + D
Sbjct: 173 IAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ 231
Query: 606 IQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
+ EAK ++ +L P R+ E HP+
Sbjct: 232 VSDEAKQLVKLMLTYEPSKRI---SAEEALNHPWI 263
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 23/275 (8%)
Query: 369 IKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVT 428
+K + +GAYG V L + K T A+K I K+S+ + + E ++ D+P ++
Sbjct: 26 VKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
+Y FE K++ LVME GG+ + A + + YLH + IVHR
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHR 145
Query: 489 DLKPDNLLITALGH---IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
DLKP+NLL+ + IK+ DFGLS + E K K+ GT Y
Sbjct: 146 DLKPENLLLESKSRDALIKIVDFGLS-------------AHFEVGGKM---KERLGTAYY 189
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWP 605
IAPEV LR+ Y + D WS GVILY L G PF G+T +E+ + D
Sbjct: 190 IAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ 248
Query: 606 IQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
+ EAK ++ +L P R+ E HP+
Sbjct: 249 VSDEAKQLVKLMLTYEPSKRISA---EEALNHPWI 280
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 137/288 (47%), Gaps = 25/288 (8%)
Query: 354 KDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
K + + ++ ++K + G++G V L H T Q+ A+K I K L + ++
Sbjct: 4 KSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER 63
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
E + +P ++ +Y ++K + +V+EY G + + + AR +F +
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQI 122
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
+ AVEY H + IVHRDLKP+NLL+ ++K+ DFGLS +M+ L
Sbjct: 123 ISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN--IMTDGNFL----------- 169
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTV 592
K G+P Y APEVI + Y P VD WS GVILY L +PF E+ LF +
Sbjct: 170 ---KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS 226
Query: 593 NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
N P + A +I +L NP +R+ HE+ + +F
Sbjct: 227 NGVYTLPKF----LSPGAAGLIKRMLIVNPLNRISI---HEIMQDDWF 267
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 137/288 (47%), Gaps = 25/288 (8%)
Query: 354 KDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
K + + ++ ++K + G++G V L H T Q+ A+K I K L + ++
Sbjct: 3 KSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER 62
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
E + +P ++ +Y ++K + +V+EY G + + + AR +F +
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQI 121
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
+ AVEY H + IVHRDLKP+NLL+ ++K+ DFGLS +M+ L
Sbjct: 122 ISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSN--IMTDGNFL----------- 168
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTV 592
K G+P Y APEVI + Y P VD WS GVILY L +PF E+ LF +
Sbjct: 169 ---KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS 225
Query: 593 NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
N P + A +I +L NP +R+ HE+ + +F
Sbjct: 226 NGVYTLPKF----LSPGAAGLIKRMLIVNPLNRISI---HEIMQDDWF 266
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 25/278 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
++ ++K + G++G V L H T Q+ A+K I K L + ++ E + +
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
P ++ +Y ++K + +V+EY G + + + AR +F + + AVEY H +
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 126
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
IVHRDLKP+NLL+ ++K+ DFGLS +M+ L K G+P
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSN--IMTDGNFL--------------KTSCGSP 170
Query: 544 EYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSED 602
Y APEVI + Y P VD WS GVILY L +PF E+ LF + N P
Sbjct: 171 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF- 229
Query: 603 DWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
+ A +I +L NP +R+ HE+ + +F
Sbjct: 230 ---LSPGAAGLIKRMLIVNPLNRISI---HEIMQDDWF 261
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 134/278 (48%), Gaps = 25/278 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
++ ++K + G++G V L H T Q+ A+K I K L + ++ E + +
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
P ++ +Y ++K + +V+EY G + + + AR +F + + AVEY H +
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
IVHRDLKP+NLL+ ++K+ DFGLS +M+ L K G+P
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSN--IMTDGNFL--------------KTSCGSP 166
Query: 544 EYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSED 602
Y APEVI + Y P VD WS GVILY L +PF E+ LF + N P
Sbjct: 167 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF- 225
Query: 603 DWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
+ A +I +L NP +R+ HE+ + +F
Sbjct: 226 ---LSPGAAGLIKRMLIVNPLNRISI---HEIMQDDWF 257
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 154/329 (46%), Gaps = 47/329 (14%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+ + + + G++G V L H +T+Q+ A+K I + L + +V E + +P
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
++ +Y T + +V+EY GG+ + + D R +F + + A+EY H + I
Sbjct: 71 IIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 486 VHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
VHRDLKP+NLL+ ++K+ DFGLS +M+ L K G+P Y
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLS--NIMTDGNFL--------------KTSCGSPNY 173
Query: 546 IAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHT-----VNDDIEWP 599
APEVI + Y P VD WS G++LY LVG +PF E LF V D P
Sbjct: 174 AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSP 233
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKAEFIPQL 659
A+S+I ++ +P R+ E++ P+F N++ LR P
Sbjct: 234 G---------AQSLIRRMIVADPMQRITI---QEIRRDPWF-NVNLPDYLR------PM- 273
Query: 660 DDEEDTSYFDSRMERYNHDIGEDTDETED 688
+E SY DSR+ +GE +ED
Sbjct: 274 -EEVQGSYADSRIV---SKLGEAMGFSED 298
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 141/297 (47%), Gaps = 26/297 (8%)
Query: 355 DKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIK-NSLMLRNQM--EQV 411
+ F + E+ + + + + +G + V R K T +A K I K S R + E++
Sbjct: 3 ETFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEI 62
Query: 412 FAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFA 471
E I+ +P ++T++ +E + + L++E V GG+ L L + A +
Sbjct: 63 EREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLI----TALGHIKLTDFGLSKMGLMSLATNLYECYV 527
+ + V YLH+ I H DLKP+N+++ + HIKL DFGL+ +E
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----------HEI-- 169
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEEL 587
D +F K ++GTPE++APE++ + G D WS+GVI Y L G PF G+T +E
Sbjct: 170 -EDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 226
Query: 588 FAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
A+ ++ E AK I LL + R RL E HP+ + +D
Sbjct: 227 LANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTI---QEALRHPWITPVD 280
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 354 KDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
+D +K P E F V++ + G+YGSVY HKET Q A+K++ + + ++++
Sbjct: 20 EDSLTKQPEEV-FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV-----PVESDLQEIIK 73
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK-NTGPLPADMARFYFAE 472
E IM D+P VV Y S+ L +VMEY G + +++ L D
Sbjct: 74 EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQS 133
Query: 473 TVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
T+ +EYLH +HRD+K N+L+ GH KL DFG +A L + +R+
Sbjct: 134 TLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFG--------VAGQLTDXMAKRNX- 184
Query: 533 QFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
V GTP ++APEVI GY D WS+G+ E G P+
Sbjct: 185 ------VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 138/281 (49%), Gaps = 38/281 (13%)
Query: 358 SKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
+ T +++ V + + GA+ V HK T FA K I L R+ +++ E I
Sbjct: 23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARI 81
Query: 418 MSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET---- 473
+P +V ++ S + + LV + V GG+ L ++ +AR +++E
Sbjct: 82 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE---LFEDI------VAREFYSEADASH 132
Query: 474 -----VLAVEYLHSYGIVHRDLKPDNLLITALGH---IKLTDFGLSKMGLMSLATNLYEC 525
+ ++ Y HS GIVHR+LKP+NLL+ + +KL DFGL+ + N E
Sbjct: 133 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA------IEVNDSEA 186
Query: 526 YVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPE 585
+ GTP Y++PEV+ + Y KPVD W+ GVILY LVG PF+ E
Sbjct: 187 W----------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 236
Query: 586 ELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRL 626
L+A ++PS + + EAKS+I +L NP+ R+
Sbjct: 237 RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 277
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 143/303 (47%), Gaps = 40/303 (13%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+ + + + GA+ V Q +A K I L R+ +++ E I +P
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDH-QKLEREARICRLLKHPN 82
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET---------VLA 476
+V ++ S + H L+ + V GG+ L ++ +AR Y++E + A
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGE---LFEDI------VAREYYSEADASHCIQQILEA 133
Query: 477 VEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
V + H G+VHRDLKP+NLL+ + +KL DFGL+ +E + +Q
Sbjct: 134 VLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA---------------IEVEGEQ 178
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN 593
+ GTP Y++PEV+ + YGKPVD W+ GVILY LVG PF+ E L+
Sbjct: 179 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKA 238
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKA 653
++PS + + EAK +I +L NP R+ E +HP+ S+ + H+
Sbjct: 239 GAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAA---EALKHPWISHRSTVASCMHRQ 295
Query: 654 EFI 656
E +
Sbjct: 296 ETV 298
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 19/256 (7%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ + G + Y + +T++ FA K + K+ L+ +Q E++ E I DNP VV
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRD 489
+ FE + +V+E L K + AR++ +T+ V+YLH+ ++HRD
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 490 LKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPE 549
LK NL + +K+ DFGL+ +E D ++ K + GTP YIAPE
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK-------------IEFDGER--KKDLCGTPNYIAPE 212
Query: 550 VILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVE 609
V+ ++G+ VD WS+G ILY LVG PF +E + ++ P I
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----INPV 268
Query: 610 AKSIITDLLQQNPRDR 625
A ++I +L +P R
Sbjct: 269 ASALIRRMLHADPTLR 284
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 19/256 (7%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ + G + Y + +T++ FA K + K+ L+ +Q E++ E I DNP VV
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRD 489
+ FE + +V+E L K + AR++ +T+ V+YLH+ ++HRD
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 490 LKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPE 549
LK NL + +K+ DFGL+ +E D ++ K + GTP YIAPE
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK-------------IEFDGER--KKTLCGTPNYIAPE 212
Query: 550 VILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVE 609
V+ ++G+ VD WS+G ILY LVG PF +E + ++ P I
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----INPV 268
Query: 610 AKSIITDLLQQNPRDR 625
A ++I +L +P R
Sbjct: 269 ASALIRRMLHADPTLR 284
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 19/256 (7%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ + G + Y + +T++ FA K + K+ L+ +Q E++ E I DNP VV
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRD 489
+ FE + +V+E L K + AR++ +T+ V+YLH+ ++HRD
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 490 LKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPE 549
LK NL + +K+ DFGL+ +E D ++ K + GTP YIAPE
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK-------------IEFDGER--KKXLCGTPNYIAPE 212
Query: 550 VILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVE 609
V+ ++G+ VD WS+G ILY LVG PF +E + ++ P I
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----INPV 268
Query: 610 AKSIITDLLQQNPRDR 625
A ++I +L +P R
Sbjct: 269 ASALIRRMLHADPTLR 284
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 19/256 (7%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ + G + Y + +T++ FA K + K+ L+ +Q E++ E I DNP VV
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRD 489
+ FE + +V+E L K + AR++ +T+ V+YLH+ ++HRD
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 151
Query: 490 LKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPE 549
LK NL + +K+ DFGL+ +E D ++ K + GTP YIAPE
Sbjct: 152 LKLGNLFLNDDMDVKIGDFGLATK-------------IEFDGER--KKDLCGTPNYIAPE 196
Query: 550 VILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVE 609
V+ ++G+ VD WS+G ILY LVG PF +E + ++ P I
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH----INPV 252
Query: 610 AKSIITDLLQQNPRDR 625
A ++I +L +P R
Sbjct: 253 ASALIRRMLHADPTLR 268
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 46/283 (16%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T +++ V + + GA+ V HK T FA K I L R+ +++ E I
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICR 60
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET------ 473
+P +V ++ S + + LV + V GG+ L ++ +AR +++E
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGE---LFEDI------VAREFYSEADASHCI 111
Query: 474 ---VLAVEYLHSYGIVHRDLKPDNLLITALGH---IKLTDFGLSKMGLMSLATNLYECYV 527
+ ++ Y HS GIVHR+LKP+NLL+ + +KL DFGL
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL----------------- 154
Query: 528 ERDAKQFSDKQVY----GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
A + +D + + GTP Y++PEV+ + Y KPVD W+ GVILY LVG PF+ E
Sbjct: 155 ---AIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 211
Query: 584 PEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRL 626
L+A ++PS + + EAKS+I +L NP+ R+
Sbjct: 212 QHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 46/283 (16%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T +++ V + + GA+ V HK T FA K I L R+ +++ E I
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICR 59
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET------ 473
+P +V ++ S + + LV + V GG+ L ++ +AR +++E
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGE---LFEDI------VAREFYSEADASHCI 110
Query: 474 ---VLAVEYLHSYGIVHRDLKPDNLLITALGH---IKLTDFGLSKMGLMSLATNLYECYV 527
+ ++ Y HS GIVHR+LKP+NLL+ + +KL DFGL
Sbjct: 111 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL----------------- 153
Query: 528 ERDAKQFSDKQVY----GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
A + +D + + GTP Y++PEV+ + Y KPVD W+ GVILY LVG PF+ E
Sbjct: 154 ---AIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 210
Query: 584 PEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRL 626
L+A ++PS + + EAKS+I +L NP+ R+
Sbjct: 211 QHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 253
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 133/290 (45%), Gaps = 28/290 (9%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMSFTDNPFVVT 428
+ +G + V R K T ++A K I K + E + E I+ +P V+T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
++ +E K + L++E V GG+ L L + A + + + V YLHS I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 489 DLKPDNLLITALG----HIKLTDFGLS-KMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
DLKP+N+++ IK+ DFGL+ K+ +F K ++GTP
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---------------GNEF--KNIFGTP 181
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
E++APE++ + G D WS+GVI Y L G PF G+T +E A+ + E+ E
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKA 653
AK I LL ++P+ R+ + +HP+ D L KA
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTI---QDSLQHPWIKPKDTQQALSRKA 288
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 46/283 (16%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS 419
T +++ V + + GA+ V HK T FA K I L R+ +++ E I
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICR 60
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET------ 473
+P +V ++ S + + LV + V GG+ L ++ +AR +++E
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGE---LFEDI------VAREFYSEADASHCI 111
Query: 474 ---VLAVEYLHSYGIVHRDLKPDNLLITALGH---IKLTDFGLSKMGLMSLATNLYECYV 527
+ ++ Y HS GIVHR+LKP+NLL+ + +KL DFGL
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL----------------- 154
Query: 528 ERDAKQFSDKQVY----GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
A + +D + + GTP Y++PEV+ + Y KPVD W+ GVILY LVG PF+ E
Sbjct: 155 ---AIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 211
Query: 584 PEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRL 626
L+A ++PS + + EAKS+I +L NP+ R+
Sbjct: 212 QHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 147/298 (49%), Gaps = 42/298 (14%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME-----QVFAERDIM 418
+++ + K + +GA G V L ++T ++ A+K I K + + E V E +I+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++P ++ + F+ + + +V+E +EGG+ + L + YF + +LAV+
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 479 YLHSYGIVHRDLKPDNLLITALGH---IKLTDFGLSK-MGLMSLATNLYECYVERDAKQF 534
YLH GI+HRDLKP+N+L+++ IK+TDFG SK +G SL L C
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--C--------- 177
Query: 535 SDKQVYGTPEYIAPEVILR---QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
GTP Y+APEV++ GY + VD WS+GVIL+ L G PF E +
Sbjct: 178 ------GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF----SEHRTQVS 227
Query: 592 VNDDIEWPSEDDWP-----IQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ D I + P + +A ++ LL +P+ R T E HP+ + D
Sbjct: 228 LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT---EEALRHPWLQDED 282
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 140/295 (47%), Gaps = 26/295 (8%)
Query: 357 FSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIK-NSLMLRNQM--EQVFA 413
F + E+ + + + + +G + V R K T +A K I K S R + E++
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
E I+ + V+T++ +E + + L++E V GG+ L L + A + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI----TALGHIKLTDFGLSKMGLMSLATNLYECYVER 529
+ V YLH+ I H DLKP+N+++ + HIKL DFGL+ +E
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----------HEI---E 170
Query: 530 DAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFA 589
D +F K ++GTPE++APE++ + G D WS+GVI Y L G PF G+T +E A
Sbjct: 171 DGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 590 HTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ + ++ E AK I LL + R RL E HP+ + +D
Sbjct: 229 NITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTI---QEALRHPWITPVD 280
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 132/277 (47%), Gaps = 23/277 (8%)
Query: 357 FSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFA 413
F + E+ + + + + +G + V R K T + +A K I K L + E++
Sbjct: 5 FRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER 64
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
E +I+ +P ++T++ FE K + L++E V GG+ L L D A + +
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALG----HIKLTDFGLSKMGLMSLATNLYECYVER 529
+ V YLHS I H DLKP+N+++ IKL DFG++ +
Sbjct: 125 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA--------------HKIE 170
Query: 530 DAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFA 589
+F K ++GTPE++APE++ + G D WS+GVI Y L G PF GET +E
Sbjct: 171 AGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT 228
Query: 590 HTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRL 626
+ + ++ E AK I LL ++P+ R+
Sbjct: 229 NISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 265
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 147/308 (47%), Gaps = 40/308 (12%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+D+ + + + GA+ V K Q +A K I L R+ +++ E I +
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDH-QKLEREARICRLLKH 89
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET---------V 474
P +V ++ S + LV + V GG+ L ++ +AR Y++E +
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGE---LFEDI------VAREYYSEADASHCIHQIL 140
Query: 475 LAVEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+V ++H + IVHRDLKP+NLL+ + +KL DFGL+ +E
Sbjct: 141 ESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA---------------IEVQG 185
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
+Q + GTP Y++PEV+ + YGKPVD W+ GVILY LVG PF+ E +L+
Sbjct: 186 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 245
Query: 592 VNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRH 651
++PS + + EAK++I +L NP R+ + +HP+ + + H
Sbjct: 246 KAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAD---QALKHPWVCQRSTVASMMH 302
Query: 652 KAEFIPQL 659
+ E + L
Sbjct: 303 RQETVECL 310
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 147/298 (49%), Gaps = 42/298 (14%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME-----QVFAERDIM 418
+++ + K + +GA G V L ++T ++ A+K I K + + E V E +I+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++P ++ + F+ + + +V+E +EGG+ + L + YF + +LAV+
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 479 YLHSYGIVHRDLKPDNLLITALGH---IKLTDFGLSK-MGLMSLATNLYECYVERDAKQF 534
YLH GI+HRDLKP+N+L+++ IK+TDFG SK +G SL L C
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--C--------- 177
Query: 535 SDKQVYGTPEYIAPEVILR---QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
GTP Y+APEV++ GY + VD WS+GVIL+ L G PF E +
Sbjct: 178 ------GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF----SEHRTQVS 227
Query: 592 VNDDIEWPSEDDWP-----IQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ D I + P + +A ++ LL +P+ R T E HP+ + D
Sbjct: 228 LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT---EEALRHPWLQDED 282
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 130/271 (47%), Gaps = 23/271 (8%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMS 419
E+ + + + + +G + V R K T + +A K I K L + E++ E +I+
Sbjct: 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+P ++T++ FE K + L++E V GG+ L L D A + + + V Y
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 123
Query: 480 LHSYGIVHRDLKPDNLLITALG----HIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
LHS I H DLKP+N+++ IKL DFG++ + +F
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA--------------HKIEAGNEF- 168
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDD 595
K ++GTPE++APE++ + G D WS+GVI Y L G PF GET +E + +
Sbjct: 169 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVN 227
Query: 596 IEWPSEDDWPIQVEAKSIITDLLQQNPRDRL 626
++ E AK I LL ++P+ R+
Sbjct: 228 YDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 258
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 147/298 (49%), Gaps = 42/298 (14%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME-----QVFAERDIM 418
+++ + K + +GA G V L ++T ++ A+K I K + + E V E +I+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++P ++ + F+ + + +V+E +EGG+ + L + YF + +LAV+
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 479 YLHSYGIVHRDLKPDNLLITALGH---IKLTDFGLSK-MGLMSLATNLYECYVERDAKQF 534
YLH GI+HRDLKP+N+L+++ IK+TDFG SK +G SL L C
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--C--------- 177
Query: 535 SDKQVYGTPEYIAPEVILR---QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
GTP Y+APEV++ GY + VD WS+GVIL+ L G PF E +
Sbjct: 178 ------GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF----SEHRTQVS 227
Query: 592 VNDDIEWPSEDDWP-----IQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ D I + P + +A ++ LL +P+ R T E HP+ + D
Sbjct: 228 LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT---EEALRHPWLQDED 282
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 147/298 (49%), Gaps = 42/298 (14%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME-----QVFAERDIM 418
+++ + K + +GA G V L ++T ++ A+K I K + + E V E +I+
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++P ++ + F+ + + +V+E +EGG+ + L + YF + +LAV+
Sbjct: 69 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 479 YLHSYGIVHRDLKPDNLLITALGH---IKLTDFGLSK-MGLMSLATNLYECYVERDAKQF 534
YLH GI+HRDLKP+N+L+++ IK+TDFG SK +G SL L C
Sbjct: 128 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--C--------- 176
Query: 535 SDKQVYGTPEYIAPEVILR---QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
GTP Y+APEV++ GY + VD WS+GVIL+ L G PF E +
Sbjct: 177 ------GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF----SEHRTQVS 226
Query: 592 VNDDIEWPSEDDWP-----IQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ D I + P + +A ++ LL +P+ R T E HP+ + D
Sbjct: 227 LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT---EEALRHPWLQDED 281
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 26/295 (8%)
Query: 357 FSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIK-NSLMLRNQM--EQVFA 413
F + E+ + + + + +G + V R K T +A K I K S R + E++
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
E I+ + V+T++ +E + + L++E V GG+ L L + A + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI----TALGHIKLTDFGLSKMGLMSLATNLYECYVER 529
+ V YLH+ I H DLKP+N+++ + HIKL DFGL+ +E
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----------HEI---E 170
Query: 530 DAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFA 589
D +F K ++GTPE++APE++ + G D WS+GVI Y L G PF G+T +E A
Sbjct: 171 DGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 590 HTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ ++ E AK I LL + R RL E HP+ + +D
Sbjct: 229 NITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTI---QEALRHPWITPVD 280
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 131/269 (48%), Gaps = 24/269 (8%)
Query: 375 GAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFE 434
G +G V + +H+ T + A+K + + + + + ++ E + +P ++ +Y
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS 86
Query: 435 TKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDN 494
T + +VMEYV GG+ + G L +R F + + V+Y H + +VHRDLKP+N
Sbjct: 87 TPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPEN 146
Query: 495 LLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQ 554
+L+ A + K+ DFGLS M MS L + G+P Y APEVI +
Sbjct: 147 VLLDAHMNAKIADFGLSNM--MSDGEFL--------------RXSCGSPNYAAPEVISGR 190
Query: 555 GYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSI 613
Y P VD WS GVILY L G +PF + LF + D I + + P + S+
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK-KICDGIFYTPQYLNPSVI---SL 246
Query: 614 ITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
+ +LQ +P R +++EH +F
Sbjct: 247 LKHMLQVDPMKRATIK---DIREHEWFKQ 272
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 140/295 (47%), Gaps = 26/295 (8%)
Query: 357 FSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIK-NSLMLRNQM--EQVFA 413
F + E+ + + + + +G + V R K T +A K I K S R + E++
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
E I+ + V+T++ +E + + L++E V GG+ L L + A + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI----TALGHIKLTDFGLSKMGLMSLATNLYECYVER 529
+ V YLH+ I H DLKP+N+++ + HIKL DFGL+ +E
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----------HEI---E 170
Query: 530 DAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFA 589
D +F K ++GTPE++APE++ + G D WS+GVI Y L G PF G+T +E A
Sbjct: 171 DGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 590 HTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ + ++ E AK I LL + R RL E HP+ + +D
Sbjct: 229 NITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTI---QEALRHPWITPVD 280
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 130/271 (47%), Gaps = 23/271 (8%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMS 419
E+ + + + + +G + V R K T + +A K I K L + E++ E +I+
Sbjct: 25 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILR 84
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
+P ++T++ FE K + L++E V GG+ L L D A + + + V Y
Sbjct: 85 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 144
Query: 480 LHSYGIVHRDLKPDNLLITALG----HIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
LHS I H DLKP+N+++ IKL DFG++ + +F
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA--------------HKIEAGNEF- 189
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDD 595
K ++GTPE++APE++ + G D WS+GVI Y L G PF GET +E + +
Sbjct: 190 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVN 248
Query: 596 IEWPSEDDWPIQVEAKSIITDLLQQNPRDRL 626
++ E AK I LL ++P+ R+
Sbjct: 249 YDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 279
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 133/290 (45%), Gaps = 28/290 (9%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMSFTDNPFVVT 428
+ +G + V R K T ++A K I K + E + E I+ +P V+T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
++ +E K + L++E V GG+ L L + A + + + V YLHS I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 489 DLKPDNLLITALG----HIKLTDFGLS-KMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
DLKP+N+++ IK+ DFGL+ K+ +F K ++GTP
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---------------GNEF--KNIFGTP 181
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
E++APE++ + G D WS+GVI Y L G PF G+T +E A+ + E+ E
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKA 653
AK I LL ++P+ R+ + +HP+ D L KA
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTI---QDSLQHPWIKPKDTQQALSRKA 288
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 147/298 (49%), Gaps = 42/298 (14%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME-----QVFAERDIM 418
+++ + K + +GA G V L ++T ++ A+K I K + + E V E +I+
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++P ++ + F+ + + +V+E +EGG+ + L + YF + +LAV+
Sbjct: 76 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 479 YLHSYGIVHRDLKPDNLLITALGH---IKLTDFGLSK-MGLMSLATNLYECYVERDAKQF 534
YLH GI+HRDLKP+N+L+++ IK+TDFG SK +G SL L C
Sbjct: 135 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--C--------- 183
Query: 535 SDKQVYGTPEYIAPEVILR---QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
GTP Y+APEV++ GY + VD WS+GVIL+ L G PF E +
Sbjct: 184 ------GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF----SEHRTQVS 233
Query: 592 VNDDIEWPSEDDWP-----IQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ D I + P + +A ++ LL +P+ R T E HP+ + D
Sbjct: 234 LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT---EEALRHPWLQDED 288
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 140/295 (47%), Gaps = 26/295 (8%)
Query: 357 FSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIK-NSLMLRNQM--EQVFA 413
F + E+ + + + + +G + V R K T +A K I K S R + E++
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
E I+ + V+T++ +E + + L++E V GG+ L L + A + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI----TALGHIKLTDFGLSKMGLMSLATNLYECYVER 529
+ V YLH+ I H DLKP+N+++ + HIKL DFGL+ +E
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----------HEI---E 170
Query: 530 DAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFA 589
D +F K ++GTPE++APE++ + G D WS+GVI Y L G PF G+T +E A
Sbjct: 171 DGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 590 HTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ + ++ E AK I LL + R RL E HP+ + +D
Sbjct: 229 NITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTI---QEALRHPWITPVD 280
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 135/289 (46%), Gaps = 33/289 (11%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+ + V + I G+Y HK T +A+K I K+ R+ E++ ++ + +
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK---RDPSEEI---EILLRYGQH 80
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
P ++T+ ++ KH+ LV E + GG+ + A F VEYLHS
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 484 GIVHRDLKPDNLL-ITALGH---IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
G+VHRDLKP N+L + G+ +++ DFG +K + CY
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY------------- 187
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFF---GETPEELFAHTVNDDI 596
T ++APEV+ RQGY + D WS+G++LY L G PF +TPEE+ +
Sbjct: 188 --TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKF 245
Query: 597 EWPSEDDWPIQVE-AKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
S +W E AK +++ +L +P RL +V +HP+ + D
Sbjct: 246 TL-SGGNWNTVSETAKDLVSKMLHVDPHQRLTA---KQVLQHPWVTQKD 290
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 142/305 (46%), Gaps = 40/305 (13%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+++ + + + GA+ V T Q +A K I L R+ +++ E I +
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICRLLKH 62
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET---------V 474
P +V ++ S + LV + V GG+ L ++ +AR Y++E +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGE---LFEDI------VAREYYSEADASHCIQQIL 113
Query: 475 LAVEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+V + H GIVHRDLKP+NLL+ + +KL DFGL+ +E
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA---------------IEVQG 158
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
Q + GTP Y++PEV+ + YGKPVD W+ GVILY LVG PF+ E L+
Sbjct: 159 DQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI 218
Query: 592 VNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRH 651
++PS + + EAK +I +L NP R+ E +HP+ + + H
Sbjct: 219 KAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITAS---EALKHPWICQRSTVASMMH 275
Query: 652 KAEFI 656
+ E +
Sbjct: 276 RQETV 280
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 26/295 (8%)
Query: 357 FSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIK-NSLMLRNQM--EQVFA 413
F + E+ + + + + +G + V R K T +A K I K S R + E++
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
E I+ + V+T++ +E + + L++E V GG+ L L + A + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI----TALGHIKLTDFGLSKMGLMSLATNLYECYVER 529
+ V YLH+ I H DLKP+N+++ + HIKL DFGL+ +E
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----------HEI---E 170
Query: 530 DAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFA 589
D +F K ++GTPE++APE++ + G D WS+GVI Y L G PF G+T +E A
Sbjct: 171 DGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 590 HTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ ++ E AK I LL + R RL E HP+ + +D
Sbjct: 229 NITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTI---QEALRHPWITPVD 280
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 133/288 (46%), Gaps = 31/288 (10%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+ + V + I G+Y HK T +A+K I K+ R+ E++ ++ + +
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK---RDPSEEI---EILLRYGQH 80
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
P ++T+ ++ KH+ LV E + GG+ + A F VEYLHS
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 484 GIVHRDLKPDNLL-ITALGH---IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
G+VHRDLKP N+L + G+ +++ DFG +K + CY
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY------------- 187
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFF---GETPEELFAHTVNDDI 596
T ++APEV+ RQGY + D WS+G++LY L G PF +TPEE+ +
Sbjct: 188 --TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKF 245
Query: 597 EWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ + AK +++ +L +P RL +V +HP+ + D
Sbjct: 246 TLSGGNWNTVSETAKDLVSKMLHVDPHQRLTA---KQVLQHPWVTQKD 290
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 133/290 (45%), Gaps = 28/290 (9%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMSFTDNPFVVT 428
+ +G + V R K T ++A K I K + E + E I+ +P V+T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
++ +E K + L++E V GG+ L L + A + + + V YLHS I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 489 DLKPDNLLITALG----HIKLTDFGLS-KMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
DLKP+N+++ IK+ DFGL+ K+ +F K ++GTP
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---------------GNEF--KNIFGTP 181
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
E++APE++ + G D WS+GVI Y L G PF G+T +E A+ + E+ E
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKA 653
AK I LL ++P+ R+ + +HP+ D L KA
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTI---QDSLQHPWIKPKDTQQALSRKA 288
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 145/308 (47%), Gaps = 40/308 (12%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+++ + + I GA+ V T +A K I L R+ +++ E I +
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDH-QKLEREARICRLLKH 62
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET---------V 474
+V ++ S + LV + V GG+ L ++ +AR Y++E +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGE---LFEDI------VAREYYSEADASHCIQQIL 113
Query: 475 LAVEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
AV + H G+VHRDLKP+NLL+ + +KL DFGL+ +E
Sbjct: 114 EAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA---------------IEVQG 158
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
Q + GTP Y++PEV+ ++ YGKPVD W+ GVILY LVG PF+ E +L+
Sbjct: 159 DQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 218
Query: 592 VNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRH 651
++PS + + EAK++I +L NP R+ HE +HP+ + + H
Sbjct: 219 KAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITA---HEALKHPWVCQRSTVASMMH 275
Query: 652 KAEFIPQL 659
+ E + L
Sbjct: 276 RQETVECL 283
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 24/276 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+DF + + + G +G+VYL R K++ A+K + K+ + Q+ E +I + +
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
P ++ +Y F ++ + L++EY G+ L+ + E A+ Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
++HRD+KP+NLL+ G +K+ DFG S A K + GT
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSV-----------------HAPSLRRKTMCGTL 185
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
+Y+ PE+I + + + VD W +GV+ YE LVG PF + E + V D+++P+
Sbjct: 186 DYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPAS-- 243
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
+ A+ +I+ LL+ NP +RL +V HP+
Sbjct: 244 --VPTGAQDLISKLLRHNPSERLPLA---QVSAHPW 274
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 133/290 (45%), Gaps = 28/290 (9%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK---NSLMLRNQMEQVFAERDIMSFTDNPFVVT 428
+ +G + V R K T ++A K I K S E + E I+ +P V+T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
++ +E K + L++E V GG+ L L + A + + + V YLHS I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 489 DLKPDNLLITALG----HIKLTDFGLS-KMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
DLKP+N+++ IK+ DFGL+ K+ +F K ++GTP
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---------------GNEF--KNIFGTP 181
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
E++APE++ + G D WS+GVI Y L G PF G+T +E A+ + E+ E
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKA 653
AK I LL ++P+ R+ + +HP+ D L KA
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTI---QDSLQHPWIKPKDTQQALSRKA 288
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 142/305 (46%), Gaps = 40/305 (13%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+++ + + + GA+ V T Q +A K I L R+ +++ E I +
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICRLLKH 62
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET---------V 474
P +V ++ S + LV + V GG+ L ++ +AR Y++E +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGE---LFEDI------VAREYYSEADASHCIQQIL 113
Query: 475 LAVEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+V + H GIVHRDLKP+NLL+ + +KL DFGL+ +E
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA---------------IEVQG 158
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
Q + GTP Y++PEV+ + YGKPVD W+ GVILY LVG PF+ E L+
Sbjct: 159 DQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI 218
Query: 592 VNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRH 651
++PS + + EAK +I +L NP R+ E +HP+ + + H
Sbjct: 219 KAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITAS---EALKHPWICQRSTVASMMH 275
Query: 652 KAEFI 656
+ E +
Sbjct: 276 RQETV 280
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 40/304 (13%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
++ + + + GA+ V Q +A I L R+ +++ E I +P
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDH-QKLEREARICRLLKHP 70
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET---------VL 475
+V ++ S + H L+ + V GG+ L ++ +AR Y++E +
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGE---LFEDI------VAREYYSEADASHCIQQILE 121
Query: 476 AVEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
AV + H G+VHR+LKP+NLL+ + +KL DFGL+ +E + +
Sbjct: 122 AVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA---------------IEVEGE 166
Query: 533 QFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTV 592
Q + GTP Y++PEV+ + YGKPVD W+ GVILY LVG PF+ E L+
Sbjct: 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIK 226
Query: 593 NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHK 652
++PS + + EAK +I +L NP R+ E +HP+ S+ + H+
Sbjct: 227 AGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAA---EALKHPWISHRSTVASCMHR 283
Query: 653 AEFI 656
E +
Sbjct: 284 QETV 287
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 145/294 (49%), Gaps = 34/294 (11%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME-----QVFAERDIM 418
+++ + K + +GA G V L ++T ++ A++ I K + + E V E +I+
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++P ++ + F+ + + +V+E +EGG+ + L + YF + +LAV+
Sbjct: 195 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 479 YLHSYGIVHRDLKPDNLLITALGH---IKLTDFGLSK-MGLMSLATNLYECYVERDAKQF 534
YLH GI+HRDLKP+N+L+++ IK+TDFG SK +G SL L C
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--C--------- 302
Query: 535 SDKQVYGTPEYIAPEVILR---QGYGKPVDWWSMGVILYEFLVGCVPFFG-ETPEELFAH 590
GTP Y+APEV++ GY + VD WS+GVIL+ L G PF T L
Sbjct: 303 ------GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 356
Query: 591 TVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ + E + +A ++ LL +P+ R T E HP+ + D
Sbjct: 357 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT---EEALRHPWLQDED 407
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 132/290 (45%), Gaps = 28/290 (9%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMSFTDNPFVVT 428
+ +G + V R K T ++A K I K + E + E I+ +P V+T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
++ +E K + L++E V GG+ L L + A + + + V YLHS I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 489 DLKPDNLLITALG----HIKLTDFGLS-KMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
DLKP+N+++ IK+ DFGL+ K+ +F K ++GTP
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---------------GNEF--KNIFGTP 181
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
++APE++ + G D WS+GVI Y L G PF G+T +E A+ + E+ E
Sbjct: 182 AFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKA 653
AK I LL ++P+ R+ + +HP+ D L KA
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTI---QDSLQHPWIKPKDTQQALSRKA 288
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 28/306 (9%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMK--KIIKNSLMLRNQMEQVFAERDIMSF 420
E+ + + ++I G + V ++ET Q+FA+K + K + E + E I
Sbjct: 25 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 84
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGD-CASLLK--NTGPLPAD-MARFYFAETVLA 476
+P +V + ++ + L +V E+++G D C ++K + G + ++ +A Y + + A
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGH---IKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
+ Y H I+HRD+KP +L+ + + +KL FG+ A L E + +
Sbjct: 145 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV--------AIQLGESGLVAGGR- 195
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN 593
GTP ++APEV+ R+ YGKPVD W GVIL+ L GC+PF+G T E LF +
Sbjct: 196 ------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIK 248
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKA 653
+ I AK ++ +L +P +R+ +E HP+ D + H
Sbjct: 249 GKYKMNPRQWSHISESAKDLVRRMLMLDPAERITV---YEALNHPWLKERDRYAYKIHLP 305
Query: 654 EFIPQL 659
E + QL
Sbjct: 306 ETVEQL 311
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 145/294 (49%), Gaps = 34/294 (11%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME-----QVFAERDIM 418
+++ + K + +GA G V L ++T ++ A++ I K + + E V E +I+
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++P ++ + F+ + + +V+E +EGG+ + L + YF + +LAV+
Sbjct: 209 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 479 YLHSYGIVHRDLKPDNLLITALGH---IKLTDFGLSK-MGLMSLATNLYECYVERDAKQF 534
YLH GI+HRDLKP+N+L+++ IK+TDFG SK +G SL L C
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL--C--------- 316
Query: 535 SDKQVYGTPEYIAPEVILR---QGYGKPVDWWSMGVILYEFLVGCVPFFG-ETPEELFAH 590
GTP Y+APEV++ GY + VD WS+GVIL+ L G PF T L
Sbjct: 317 ------GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 370
Query: 591 TVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ + E + +A ++ LL +P+ R T E HP+ + D
Sbjct: 371 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT---EEALRHPWLQDED 421
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 138/280 (49%), Gaps = 24/280 (8%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E IK I G+ G V + K T ++ A+KK+ L + + E +F E IM
Sbjct: 43 PREYLANFIK-IGEGSTGIVCIATEKHTGKQVAVKKM---DLRKQQRRELLFNEVVIMRD 98
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
+ VV MY S+ L +VME++EGG ++ +T +A + + A+ YL
Sbjct: 99 YHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLS-VLRALSYL 157
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
H+ G++HRD+K D++L+T+ G IKL+DFG + V ++ + K +
Sbjct: 158 HNQGVIHRDIKSDSILLTSDGRIKLSDFG-------------FCAQVSKEVPK--RKXLV 202
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPS 600
GTP ++APEVI R YG VD WS+G+++ E + G P+F E P + + D +
Sbjct: 203 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM-RRIRDSLPPRV 261
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
+D + + + +L + P R E+ HP+
Sbjct: 262 KDLHKVSSVLRGFLDLMLVREPSQR---ATAQELLGHPFL 298
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 28/306 (9%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMK--KIIKNSLMLRNQMEQVFAERDIMSF 420
E+ + + ++I G + V ++ET Q+FA+K + K + E + E I
Sbjct: 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGD-CASLLK--NTGPLPAD-MARFYFAETVLA 476
+P +V + ++ + L +V E+++G D C ++K + G + ++ +A Y + + A
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGH---IKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
+ Y H I+HRD+KP +L+ + + +KL FG+ A L E + +
Sbjct: 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV--------AIQLGESGLVAGGR- 193
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN 593
GTP ++APEV+ R+ YGKPVD W GVIL+ L GC+PF+G T E LF +
Sbjct: 194 ------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIK 246
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLRHKA 653
+ I AK ++ +L +P +R+ +E HP+ D + H
Sbjct: 247 GKYKMNPRQWSHISESAKDLVRRMLMLDPAERITV---YEALNHPWLKERDRYAYKIHLP 303
Query: 654 EFIPQL 659
E + QL
Sbjct: 304 ETVEQL 309
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 134/278 (48%), Gaps = 35/278 (12%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQM-----------EQV 411
E+ F V KL S GAYG V L + K A+K +IK S + + E++
Sbjct: 36 ESYFKVRKLGS-GAYGEVLLCKEKNGHSEKAIK-VIKKSQFDKGRYSDDNKNIEKFHEEI 93
Query: 412 FAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFA 471
+ E ++ D+P ++ ++ FE KK+ LV E+ EGG+ + N A
Sbjct: 94 YNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMK 153
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
+ + + YLH + IVHRD+KP+N+L+ +L +IK+ DFGLS
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF-------------- 199
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
+K + + GT YIAPEV L++ Y + D WS GVI+Y L G PF G+ +++
Sbjct: 200 --SKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII 256
Query: 589 AHTVNDDIEWPSEDDWP-IQVEAKSIITDLLQQNPRDR 625
V + +DW I EAK +I +L + R
Sbjct: 257 K-KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKR 293
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 136/281 (48%), Gaps = 28/281 (9%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
F V + GA VY + K T++ +A+K ++K ++ + V E ++ +P
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALK-VLKKTV----DKKIVRTEIGVLLRLSHPN 109
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
++ + FET + LV+E V GG+ + G A + + AV YLH GI
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGI 169
Query: 486 VHRDLKPDNLLITALGH---IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
VHRDLKP+NLL +K+ DFGLSK+ VE Q K V GT
Sbjct: 170 VHRDLKPENLLYATPAPDAPLKIADFGLSKI-------------VEH---QVLMKTVCGT 213
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEE-LFAHTVNDDIEWPSE 601
P Y APE++ YG VD WS+G+I Y L G PF+ E ++ +F +N + + S
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISP 273
Query: 602 DDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
+ + AK ++ L+ +P+ RL T + +HP+ +
Sbjct: 274 WWDEVSLNAKDLVRKLIVLDPKKRLTT---FQALQHPWVTG 311
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 129/276 (46%), Gaps = 28/276 (10%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMSFTDNPFVVT 428
+ +G + V R K T ++A K I K + E + E I+ +P V+T
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
++ +E K + L++E V GG+ L L + A + + + V YLHS I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 489 DLKPDNLLITALG----HIKLTDFGLS-KMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
DLKP+N+++ IK+ DFGL+ K+ +F K ++GTP
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---------------GNEF--KNIFGTP 181
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
E++APE++ + G D WS+GVI Y L G PF G+T +E A+ + E+ E
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
AK I LL ++P+ R+ + +HP+
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTI---QDSLQHPW 274
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 131/286 (45%), Gaps = 28/286 (9%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMSFTDNPFVVT 428
+ +G + V R K T ++A K I K + E + E I+ +P V+T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
++ +E K + L++E V GG+ L L + A + + + V YLHS I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 489 DLKPDNLLITALG----HIKLTDFGLS-KMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
DLKP+N+++ IK+ DFGL+ K+ +F K ++GTP
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---------------GNEF--KNIFGTP 181
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
E++APE++ + G D WS+GVI Y L G PF G+T +E A+ + E+ E
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLL 649
AK I LL ++P+ R+ + +HP+ D L
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTI---QDSLQHPWIKPKDTQQAL 284
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+T + I GA G+VY T Q A++++ +L + + E + E +M NP
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPN 78
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
+V S+ L +VMEY+ GG ++ T +A E + A+E+LHS +
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQV 137
Query: 486 VHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
+HRD+K DN+L+ G +KLTDFG + +Q ++ GTP +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFC---------------AQITPEQSKRSEMVGTPYW 182
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
+APEV+ R+ YG VD WS+G++ E + G P+ E P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 129/276 (46%), Gaps = 28/276 (10%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMSFTDNPFVVT 428
+ +G + V R K T ++A K I K + E + E I+ +P V+T
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
++ +E K + L++E V GG+ L L + A + + + V YLHS I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 489 DLKPDNLLITALG----HIKLTDFGLS-KMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
DLKP+N+++ IK+ DFGL+ K+ +F K ++GTP
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---------------GNEF--KNIFGTP 181
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
E++APE++ + G D WS+GVI Y L G PF G+T +E A+ + E+ E
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
AK I LL ++P+ R+ + +HP+
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTI---QDSLQHPW 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 129/276 (46%), Gaps = 28/276 (10%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMSFTDNPFVVT 428
+ +G + V R K T ++A K I K + E + E I+ +P V+T
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
++ +E K + L++E V GG+ L L + A + + + V YLHS I H
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 489 DLKPDNLLITALG----HIKLTDFGLS-KMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
DLKP+N+++ IK+ DFGL+ K+ +F K ++GTP
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---------------GNEF--KNIFGTP 180
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
E++APE++ + G D WS+GVI Y L G PF G+T +E A+ + E+ E
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 240
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
AK I LL ++P+ R+ + +HP+
Sbjct: 241 SNTSALAKDFIRRLLVKDPKKRMTI---QDSLQHPW 273
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 129/276 (46%), Gaps = 28/276 (10%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMSFTDNPFVVT 428
+ +G + V R K T ++A K I K + E + E I+ +P V+T
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
++ +E K + L++E V GG+ L L + A + + + V YLHS I H
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 489 DLKPDNLLITALG----HIKLTDFGLS-KMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
DLKP+N+++ IK+ DFGL+ K+ +F K ++GTP
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---------------GNEF--KNIFGTP 180
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
E++APE++ + G D WS+GVI Y L G PF G+T +E A+ + E+ E
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 240
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
AK I LL ++P+ R+ + +HP+
Sbjct: 241 SNTSALAKDFIRRLLVKDPKKRMTI---QDSLQHPW 273
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 129/276 (46%), Gaps = 28/276 (10%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMSFTDNPFVVT 428
+ +G + V R K T ++A K I K + E + E I+ +P V+T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
++ +E K + L++E V GG+ L L + A + + + V YLHS I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 489 DLKPDNLLITALG----HIKLTDFGLS-KMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
DLKP+N+++ IK+ DFGL+ K+ +F K ++GTP
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---------------GNEF--KNIFGTP 181
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
E++APE++ + G D WS+GVI Y L G PF G+T +E A+ + E+ E
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
AK I LL ++P+ R+ + +HP+
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTI---QDSLQHPW 274
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 128/272 (47%), Gaps = 24/272 (8%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
+ G +G V + H+ T + A+K + + + + + ++ E + +P ++ +Y
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLK 491
T +VMEYV GG+ + G + AR F + + AV+Y H + +VHRDLK
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK 138
Query: 492 PDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI 551
P+N+L+ A + K+ DFGLS M MS L RD+ G+P Y APEVI
Sbjct: 139 PENVLLDAHMNAKIADFGLSNM--MSDGEFL------RDS--------CGSPNYAAPEVI 182
Query: 552 LRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEA 610
+ Y P VD WS GVILY L G +PF E LF P +
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY----LNRSV 238
Query: 611 KSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
+++ +LQ +P R +++EH +F
Sbjct: 239 ATLLMHMLQVDPLKRATI---KDIREHEWFKQ 267
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 139/286 (48%), Gaps = 35/286 (12%)
Query: 366 FTVIK--LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+TV K ++ G +G V+ T + A K IIK M E+V E +M+ D+
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAK-IIKTRGM--KDKEEVKNEISVMNQLDH 145
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL-AVEYLHS 482
++ +Y +FE+K + LVMEYV+GG+ + + ++ F + + + ++H
Sbjct: 146 ANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ 205
Query: 483 YGIVHRDLKPDNLLITA--LGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
I+H DLKP+N+L IK+ DFGL++ Y R+ + + +
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARR------------YKPREKLKVN----F 249
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDI--EW 598
GTPE++APEV+ P D WS+GVI Y L G PF G+ A T+N+ + W
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND----AETLNNILACRW 305
Query: 599 PSEDD--WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
ED+ I EAK I+ LL + R+ E +HP+ S+
Sbjct: 306 DLEDEEFQDISEEAKEFISKLLIKEKSWRISAS---EALKHPWLSD 348
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 124/263 (47%), Gaps = 25/263 (9%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMSFTDNPFVVT 428
+ +G + V R K T ++A K I K + E + E I+ +P V+T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
++ +E K + L++E V GG+ L L + A + + + V YLHS I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 489 DLKPDNLLITALG----HIKLTDFGLS-KMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
DLKP+N+++ IK+ DFGL+ K+ +F K ++GTP
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---------------GNEF--KNIFGTP 181
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
E++APE++ + G D WS+GVI Y L G PF G+T +E A+ + E+ E
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 604 WPIQVEAKSIITDLLQQNPRDRL 626
AK I LL ++P+ R+
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRM 264
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 124/263 (47%), Gaps = 25/263 (9%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMSFTDNPFVVT 428
+ +G + V R K T ++A K I K + E + E I+ +P V+T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
++ +E K + L++E V GG+ L L + A + + + V YLHS I H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 489 DLKPDNLLITALG----HIKLTDFGLS-KMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
DLKP+N+++ IK+ DFGL+ K+ +F K ++GTP
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---------------GNEF--KNIFGTP 181
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
E++APE++ + G D WS+GVI Y L G PF G+T +E A+ + E+ E
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 604 WPIQVEAKSIITDLLQQNPRDRL 626
AK I LL ++P+ R+
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRM 264
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 19/255 (7%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY 430
+ G + + + +T++ FA K + K+ L+ +Q E++ E I + VV +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 431 CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDL 490
FE + +V+E L K L AR+Y + VL +YLH ++HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 491 KPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEV 550
K NL + +K+ DFGL+ VE D ++ K + GTP YIAPEV
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATK-------------VEYDGER--KKTLCGTPNYIAPEV 188
Query: 551 ILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEA 610
+ ++G+ VD WS+G I+Y LVG PF +E + ++ P I A
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVA 244
Query: 611 KSIITDLLQQNPRDR 625
S+I +LQ +P R
Sbjct: 245 ASLIQKMLQTDPTAR 259
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 19/255 (7%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY 430
+ G + + + +T++ FA K + K+ L+ +Q E++ E I + VV +
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 431 CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDL 490
FE + +V+E L K L AR+Y + VL +YLH ++HRDL
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 491 KPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEV 550
K NL + +K+ DFGL+ VE D ++ K + GTP YIAPEV
Sbjct: 148 KLGNLFLNEDLEVKIGDFGLATK-------------VEYDGER--KKTLCGTPNYIAPEV 192
Query: 551 ILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEA 610
+ ++G+ VD WS+G I+Y LVG PF +E + ++ P I A
Sbjct: 193 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVA 248
Query: 611 KSIITDLLQQNPRDR 625
S+I +LQ +P R
Sbjct: 249 ASLIQKMLQTDPTAR 263
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+T + I GA G+VY T Q A++++ +L + + E + E +M NP
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPN 79
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
+V S+ L +VMEY+ GG ++ T +A E + A+E+LHS +
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQV 138
Query: 486 VHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
+HRD+K DN+L+ G +KLTDFG + +Q + GTP +
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFC---------------AQITPEQSKRSXMVGTPYW 183
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
+APEV+ R+ YG VD WS+G++ E + G P+ E P
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 222
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+T + I GA G+VY T Q A++++ +L + + E + E +M NP
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPN 78
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
+V S+ L +VMEY+ GG ++ T +A E + A+E+LHS +
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQV 137
Query: 486 VHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
+HRD+K DN+L+ G +KLTDFG + +Q + GTP +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFC---------------AQITPEQSKRSTMVGTPYW 182
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
+APEV+ R+ YG VD WS+G++ E + G P+ E P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+T + I GA G+VY T Q A++++ +L + + E + E +M NP
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPN 78
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
+V S+ L +VMEY+ GG ++ T +A E + A+E+LHS +
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQV 137
Query: 486 VHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
+HRD+K DN+L+ G +KLTDFG + +Q + GTP +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFC---------------AQITPEQSKRSXMVGTPYW 182
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
+APEV+ R+ YG VD WS+G++ E + G P+ E P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 19/255 (7%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY 430
+ G + + + +T++ FA K + K+ L+ +Q E++ E I + VV +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 431 CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDL 490
FE + +V+E L K L AR+Y + VL +YLH ++HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 491 KPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEV 550
K NL + +K+ DFGL+ VE D ++ K + GTP YIAPEV
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATK-------------VEYDGER--KKTLCGTPNYIAPEV 188
Query: 551 ILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEA 610
+ ++G+ VD WS+G I+Y LVG PF +E + ++ P I A
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVA 244
Query: 611 KSIITDLLQQNPRDR 625
S+I +LQ +P R
Sbjct: 245 ASLIQKMLQTDPTAR 259
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 19/255 (7%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY 430
+ G + + + +T++ FA K + K+ L+ +Q E++ E I + VV +
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 431 CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDL 490
FE + +V+E L K L AR+Y + VL +YLH ++HRDL
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 491 KPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEV 550
K NL + +K+ DFGL+ VE D ++ K + GTP YIAPEV
Sbjct: 166 KLGNLFLNEDLEVKIGDFGLATK-------------VEYDGER--KKVLCGTPNYIAPEV 210
Query: 551 ILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEA 610
+ ++G+ VD WS+G I+Y LVG PF +E + ++ P I A
Sbjct: 211 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVA 266
Query: 611 KSIITDLLQQNPRDR 625
S+I +LQ +P R
Sbjct: 267 ASLIQKMLQTDPTAR 281
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 19/255 (7%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY 430
+ G + + + +T++ FA K + K+ L+ +Q E++ E I + VV +
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 431 CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDL 490
FE + +V+E L K L AR+Y + VL +YLH ++HRDL
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 491 KPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEV 550
K NL + +K+ DFGL+ VE D ++ K + GTP YIAPEV
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLATK-------------VEYDGER--KKVLCGTPNYIAPEV 212
Query: 551 ILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEA 610
+ ++G+ VD WS+G I+Y LVG PF +E + ++ P I A
Sbjct: 213 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVA 268
Query: 611 KSIITDLLQQNPRDR 625
S+I +LQ +P R
Sbjct: 269 ASLIQKMLQTDPTAR 283
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 126/272 (46%), Gaps = 24/272 (8%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
+ G +G V + H+ T + A+K + + + + + ++ E + +P ++ +Y
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLK 491
T +VMEYV GG+ + G + AR F + + AV+Y H + +VHRDLK
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK 138
Query: 492 PDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI 551
P+N+L+ A + K+ DFGLS M MS L + G+P Y APEVI
Sbjct: 139 PENVLLDAHMNAKIADFGLSNM--MSDGEFL--------------RTSCGSPNYAAPEVI 182
Query: 552 LRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEA 610
+ Y P VD WS GVILY L G +PF E LF P +
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY----LNRSV 238
Query: 611 KSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
+++ +LQ +P R +++EH +F
Sbjct: 239 ATLLMHMLQVDPLKRATI---KDIREHEWFKQ 267
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 19/255 (7%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY 430
+ G + + + +T++ FA K + K+ L+ +Q E++ E I + VV +
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 431 CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDL 490
FE + +V+E L K L AR+Y + VL +YLH ++HRDL
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 491 KPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEV 550
K NL + +K+ DFGL+ VE D ++ K + GTP YIAPEV
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLATK-------------VEYDGER--KKVLCGTPNYIAPEV 186
Query: 551 ILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEA 610
+ ++G+ VD WS+G I+Y LVG PF +E + ++ P I A
Sbjct: 187 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVA 242
Query: 611 KSIITDLLQQNPRDR 625
S+I +LQ +P R
Sbjct: 243 ASLIQKMLQTDPTAR 257
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 130/286 (45%), Gaps = 28/286 (9%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ---MEQVFAERDIMSFTDNPFVVT 428
+ +G + V R K T ++A K I K + E + E I+ +P V+T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
++ +E K + L+ E V GG+ L L + A + + + V YLHS I H
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 489 DLKPDNLLITALG----HIKLTDFGLS-KMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
DLKP+N+++ IK+ DFGL+ K+ +F K ++GTP
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---------------GNEF--KNIFGTP 181
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
E++APE++ + G D WS+GVI Y L G PF G+T +E A+ + E+ E
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 604 WPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLL 649
AK I LL ++P+ R+ + +HP+ D L
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTI---QDSLQHPWIKPKDTQQAL 284
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+T + I GA G+VY T Q A++++ +L + + E + E +M NP
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPN 79
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
+V S+ L +VMEY+ GG ++ T +A E + A+E+LHS +
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQV 138
Query: 486 VHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
+HR++K DN+L+ G +KLTDFG + +Q + GTP +
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFC---------------AQITPEQSKRSTMVGTPYW 183
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
+APEV+ R+ YG VD WS+G++ E + G P+ E P
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 222
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 23/271 (8%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
I G+ G V + + + + A+KK+ L + + E +F E IM + VV MY
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQHENVVEMYN 215
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLK 491
S+ L +VME++EGG ++ +T +A A + A+ LH+ G++HRD+K
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIK 274
Query: 492 PDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI 551
D++L+T G +KL+DFG + V ++ + K + GTP ++APE+I
Sbjct: 275 SDSILLTHDGRVKLSDFG-------------FCAQVSKEVPR--RKXLVGTPYWMAPELI 319
Query: 552 LRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAK 611
R YG VD WS+G+++ E + G P+F E P + + D++ ++ + K
Sbjct: 320 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLK 378
Query: 612 SIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
+ LL ++P R E+ +HP+ +
Sbjct: 379 GFLDRLLVRDPAQRATAA---ELLKHPFLAK 406
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 129/278 (46%), Gaps = 26/278 (9%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+T+ I G++G V + K TR R A KKI K + ++ +Q E +IM D+P
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ---EIEIMKSLDHPN 84
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
++ +Y +FE + LVME GG+ + + A + + AV Y H +
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 144
Query: 486 VHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
HRDLKP+N L + +KL DFGL+ + K K GT
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--------------KPGKMMRTK--VGT 188
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSED 602
P Y++P+V L YG D WS GV++Y L G PF T E+ +P +D
Sbjct: 189 PYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKD 247
Query: 603 DWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
+ +A+S+I LL ++P+ R+ + + EH +F
Sbjct: 248 WLNVSPQAESLIRRLLTKSPKQRITS---LQALEHEWF 282
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 129/278 (46%), Gaps = 26/278 (9%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+T+ I G++G V + K TR R A KKI K + ++ +Q E +IM D+P
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ---EIEIMKSLDHPN 67
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGI 485
++ +Y +FE + LVME GG+ + + A + + AV Y H +
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 486 VHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
HRDLKP+N L + +KL DFGL+ + K K GT
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--------------KPGKMMRTK--VGT 171
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSED 602
P Y++P+V L YG D WS GV++Y L G PF T E+ +P +D
Sbjct: 172 PYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKD 230
Query: 603 DWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
+ +A+S+I LL ++P+ R+ + + EH +F
Sbjct: 231 WLNVSPQAESLIRRLLTKSPKQRITS---LQALEHEWF 265
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 23/271 (8%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
I G+ G V + + + + A+KK+ L + + E +F E IM + VV MY
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQHENVVEMYN 93
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLK 491
S+ L +VME++EGG ++ +T +A A + A+ LH+ G++HRD+K
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIK 152
Query: 492 PDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI 551
D++L+T G +KL+DFG + V ++ + K + GTP ++APE+I
Sbjct: 153 SDSILLTHDGRVKLSDFG-------------FCAQVSKEVPR--RKXLVGTPYWMAPELI 197
Query: 552 LRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAK 611
R YG VD WS+G+++ E + G P+F E P + + D++ ++ + K
Sbjct: 198 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLK 256
Query: 612 SIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
+ LL ++P R E+ +HP+ +
Sbjct: 257 GFLDRLLVRDPAQRATAA---ELLKHPFLAK 284
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 23/271 (8%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
I G+ G V + + + + A+KK+ L + + E +F E IM + VV MY
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQHENVVEMYN 95
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLK 491
S+ L +VME++EGG ++ +T +A A + A+ LH+ G++HRD+K
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIK 154
Query: 492 PDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI 551
D++L+T G +KL+DFG + V ++ + K + GTP ++APE+I
Sbjct: 155 SDSILLTHDGRVKLSDFG-------------FCAQVSKEVPR--RKXLVGTPYWMAPELI 199
Query: 552 LRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAK 611
R YG VD WS+G+++ E + G P+F E P + + D++ ++ + K
Sbjct: 200 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLK 258
Query: 612 SIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
+ LL ++P R E+ +HP+ +
Sbjct: 259 GFLDRLLVRDPAQRATAA---ELLKHPFLAK 286
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 131/284 (46%), Gaps = 35/284 (12%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQV--FAERD---IMSFTDNP 424
+I G V H+ T FA+K + + + Q+E+V R+ + +P
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++T+ S+E+ + LV + + G+ L L R + AV +LH+
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN 220
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
IVHRDLKP+N+L+ I+L+DFG S C++E K +++ GTP
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFGFS-------------CHLEPGEKL---RELCGTPG 264
Query: 545 YIAPEVI------LRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEW 598
Y+APE++ GYGK VD W+ GVIL+ L G PF+ + + ++
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQF 324
Query: 599 --PSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
P DD V K +I+ LLQ +P RL + +HP+F
Sbjct: 325 SSPEWDDRSSTV--KDLISRLLQVDPEARLTA---EQALQHPFF 363
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 23/271 (8%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
I G+ G V + + + + A+KK+ L + + E +F E IM + VV MY
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLK 491
S+ L +VME++EGG ++ +T +A A + A+ LH+ G++HRD+K
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIK 197
Query: 492 PDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI 551
D++L+T G +KL+DFG + V ++ + K + GTP ++APE+I
Sbjct: 198 SDSILLTHDGRVKLSDFG-------------FCAQVSKEVPR--RKXLVGTPYWMAPELI 242
Query: 552 LRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAK 611
R YG VD WS+G+++ E + G P+F E P + + D++ ++ + K
Sbjct: 243 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLK 301
Query: 612 SIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
+ LL ++P R E+ +HP+ +
Sbjct: 302 GFLDRLLVRDPAQRATAA---ELLKHPFLAK 329
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 23/271 (8%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
I G+ G V + + + + A+KK+ L + + E +F E IM + VV MY
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQHENVVEMYN 84
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLK 491
S+ L +VME++EGG ++ +T +A A + A+ LH+ G++HRD+K
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIK 143
Query: 492 PDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI 551
D++L+T G +KL+DFG + V ++ + K + GTP ++APE+I
Sbjct: 144 SDSILLTHDGRVKLSDFG-------------FCAQVSKEVPR--RKXLVGTPYWMAPELI 188
Query: 552 LRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAK 611
R YG VD WS+G+++ E + G P+F E P + + D++ ++ + K
Sbjct: 189 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLK 247
Query: 612 SIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
+ LL ++P R E+ +HP+ +
Sbjct: 248 GFLDRLLVRDPAQRATAA---ELLKHPFLAK 275
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 23/271 (8%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
I G+ G V + + + + A+KK+ L + + E +F E IM + VV MY
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQHENVVEMYN 88
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLK 491
S+ L +VME++EGG ++ +T +A A + A+ LH+ G++HRD+K
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIK 147
Query: 492 PDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI 551
D++L+T G +KL+DFG + V ++ + K + GTP ++APE+I
Sbjct: 148 SDSILLTHDGRVKLSDFG-------------FCAQVSKEVPR--RKXLVGTPYWMAPELI 192
Query: 552 LRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAK 611
R YG VD WS+G+++ E + G P+F E P + + D++ ++ + K
Sbjct: 193 SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLK 251
Query: 612 SIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
+ LL ++P R E+ +HP+ +
Sbjct: 252 GFLDRLLVRDPAQRATAA---ELLKHPFLAK 279
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 132/293 (45%), Gaps = 41/293 (13%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+ + V + I G+Y HK T FA+K I K+ R+ E++ ++ + +
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK---RDPTEEI---EILLRYGQH 75
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
P ++T+ ++ K++ +V E ++GG+ + A VEYLH+
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 484 GIVHRDLKPDNLL-ITALGH---IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
G+VHRDLKP N+L + G+ I++ DFG +K + CY
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY------------- 182
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG---ETPEELFAHTVNDDI 596
T ++APEV+ RQGY D WS+GV+LY L G PF +TPEE+ A +
Sbjct: 183 --TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF 240
Query: 597 E-----WPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
W S D AK +++ +L +P RL V HP+ + D
Sbjct: 241 SLSGGYWNSVSD-----TAKDLVSKMLHVDPHQRLTAA---LVLRHPWIVHWD 285
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 140/316 (44%), Gaps = 60/316 (18%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRN--QMEQVFAERDIMSFTDNPFVVTM 429
I G+YG V + +TR A+K + KN + N +E++ E +M +P + +
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLK-----NTGPLPADMAR----------------- 467
Y +E ++++CLVME GG L +TG D+ +
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 468 ---------FYFAETVL---------AVEYLHSYGIVHRDLKPDNLLITALG--HIKLTD 507
F E ++ A+ YLH+ GI HRD+KP+N L + IKL D
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVD 213
Query: 508 FGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI--LRQGYGKPVDWWSM 565
FGLSK E Y + + + GTP ++APEV+ + YG D WS
Sbjct: 214 FGLSK-----------EFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262
Query: 566 GVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
GV+L+ L+G VPF G + + +N + + + + + A+ ++++LL +N +R
Sbjct: 263 GVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDER 322
Query: 626 LGTGGPHEVKEHPYFS 641
+HP+ S
Sbjct: 323 FDA---MRALQHPWIS 335
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 122/275 (44%), Gaps = 38/275 (13%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
K + G++ HK++ Q FA+K I K M N +++ A + +P +V +
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITA---LKLCEGHPNIVKL 71
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRD 489
+ F + H LVME + GG+ +K A + + V AV ++H G+VHRD
Sbjct: 72 HEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRD 131
Query: 490 LKPDNLLITALG---HIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP--- 543
LKP+NLL T IK+ DFG +++ + D Q TP
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFARL-------------------KPPDNQPLKTPCFT 172
Query: 544 -EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE-------TPEELFAHTVNDD 595
Y APE++ + GY + D WS+GVILY L G VPF + E+ D
Sbjct: 173 LHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD 232
Query: 596 IEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGG 630
+ E + EAK +I LL +P RL G
Sbjct: 233 FSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSG 267
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 131/278 (47%), Gaps = 27/278 (9%)
Query: 357 FSKTPNENDFTVI--KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
F N N+F ++ K + G + V K T Q +A K +K ++ ++ E
Sbjct: 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYA-AKFLKKRRRGQDCRAEILHE 78
Query: 415 RDIMSFTDN-PFVVTMYCSFETKKHLCLVMEYVEGGDCASL-LKNTGPLPADMARFYFAE 472
++ + P V+ ++ +E + L++EY GG+ SL L + ++ +
Sbjct: 79 IAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIK 138
Query: 473 TVL-AVEYLHSYGIVHRDLKPDNLLITA---LGHIKLTDFGLS-KMGLMSLATNLYECYV 527
+L V YLH IVH DLKP N+L+++ LG IK+ DFG+S K+G + C +
Sbjct: 139 QILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG--------HACEL 190
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEEL 587
+++ GTPEY+APE++ D W++G+I Y L PF GE +E
Sbjct: 191 ---------REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET 241
Query: 588 FAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
+ + ++++ E + A I LL +NP R
Sbjct: 242 YLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKR 279
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 136/270 (50%), Gaps = 25/270 (9%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
I G+ G V L R K + ++ A+K + L + + E +F E IM + VV MY
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM---DLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL-AVEYLHSYGIVHRDL 490
S+ + L ++ME+++GG ++ +A E VL A+ YLH+ G++HRD+
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATV--CEAVLQALAYLHAQGVIHRDI 167
Query: 491 KPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEV 550
K D++L+T G +KL+DFG + + +D + K + GTP ++APEV
Sbjct: 168 KSDSILLTLDGRVKLSDFG-------------FCAQISKDVPK--RKXLVGTPYWMAPEV 212
Query: 551 ILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEA 610
I R Y VD WS+G+++ E + G P+F ++P + + D ++ +
Sbjct: 213 ISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSPPPKLKNSHKVSPVL 271
Query: 611 KSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
+ + +L ++P++R E+ +HP+
Sbjct: 272 RDFLERMLVRDPQER---ATAQELLDHPFL 298
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 34/297 (11%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
I G + V L H T + A+K + KN+L + + ++ E + + + + +Y
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNLRHQHICQLYH 75
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLK 491
ET + +V+EY GG+ + + L + R F + V AV Y+HS G HRDLK
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLK 135
Query: 492 PDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI 551
P+NLL +KL DFGL C + K + + G+ Y APE+I
Sbjct: 136 PENLLFDEYHKLKLIDFGL--------------CAKPKGNKDYHLQTCCGSLAYAAPELI 181
Query: 552 LRQGY-GKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEA 610
+ Y G D WSMG++LY + G +PF + L+ + + P W + +
Sbjct: 182 QGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK---W-LSPSS 237
Query: 611 KSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN-----LDWNSLLRHKAEFIPQLDDE 662
++ +LQ +P+ R+ + HP+ ++W S K FI LDD+
Sbjct: 238 ILLLQQMLQVDPKKRISM---KNLLNHPWIMQDYNYPVEWQS----KNPFI-HLDDD 286
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 30/306 (9%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT 421
N +D+ + ++I +GA V +++ A+K+I N + M+++ E MS
Sbjct: 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI--NLEKCQTSMDELLKEIQAMSQC 70
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKN--------TGPLPADMARFYFAET 473
+P +V+ Y SF K L LVM+ + GG ++K+ +G L E
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
+ +EYLH G +HRD+K N+L+ G +++ DFG+S LAT + R+ +
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF----LATG---GDITRNKVR 183
Query: 534 FSDKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTV 592
K GTP ++APEV+ + +GY D WS G+ E G P+ P ++ T+
Sbjct: 184 ---KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL 240
Query: 593 NDD---IEWPSEDDWPIQVEAKS---IITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWN 646
+D +E +D ++ KS +I+ LQ++P R E+ H +F
Sbjct: 241 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAA---ELLRHKFFQKAKNK 297
Query: 647 SLLRHK 652
L+ K
Sbjct: 298 EFLQEK 303
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 108/216 (50%), Gaps = 22/216 (10%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+++ G++G V L + K T Q A+K I K + + E + E ++ D+P ++ +
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 430 YCSFETKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
Y FE K + LV E GG+ ++ D AR + + + Y+H IVHR
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSGITYMHKNKIVHR 150
Query: 489 DLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
DLKP+NLL+ + +I++ DFGLS +E +K+ DK GT Y
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLS---------THFEA-----SKKMKDK--IGTAYY 194
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
IAPEV L Y + D WS GVILY L GC PF G
Sbjct: 195 IAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 141/323 (43%), Gaps = 69/323 (21%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRF-AMKKI---IKNSLMLRNQMEQVFAERDIM 418
+ + + I GAYG V+ R + RF A+K++ M + + +V R +
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 419 SFTDNPFVVTMY--CSF-----ETKKHLCLVMEYVEGGDCASLLKNTGP-LPADMARFYF 470
+F ++P VV ++ C+ ETK L LV E+V+ L K P +P + +
Sbjct: 70 TF-EHPNVVRLFDVCTVSRTDRETK--LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 471 AETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSK-----MGLMSLATNLYEC 525
+ + +++LHS+ +VHRDLKP N+L+T+ G IKL DFGL++ M L S+ L+
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW-- 184
Query: 526 YVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPE 585
Y APEV+L+ Y PVD WS+G I E F G +
Sbjct: 185 -------------------YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
Query: 586 ELFAHTVNDDIEWPSEDDWPIQVE------------------------AKSIITDLLQQN 621
+ + D I P E+DWP V K ++ L N
Sbjct: 226 DQLGKIL-DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN 284
Query: 622 PRDRLGTGGPHEVKEHPYFSNLD 644
P R+ + HPYF +L+
Sbjct: 285 PAKRISA---YSALSHPYFQDLE 304
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 108/216 (50%), Gaps = 22/216 (10%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+++ G++G V L + K T Q A+K I K + + E + E ++ D+P ++ +
Sbjct: 55 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 430 YCSFETKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
Y FE K + LV E GG+ ++ D AR + + + Y+H IVHR
Sbjct: 115 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSGITYMHKNKIVHR 173
Query: 489 DLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
DLKP+NLL+ + +I++ DFGLS +E +K+ DK GT Y
Sbjct: 174 DLKPENLLLESKSKDANIRIIDFGLS---------THFEA-----SKKMKDK--IGTAYY 217
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
IAPEV L Y + D WS GVILY L GC PF G
Sbjct: 218 IAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNG 252
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 108/216 (50%), Gaps = 22/216 (10%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+++ G++G V L + K T Q A+K I K + + E + E ++ D+P ++ +
Sbjct: 56 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 430 YCSFETKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
Y FE K + LV E GG+ ++ D AR + + + Y+H IVHR
Sbjct: 116 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSGITYMHKNKIVHR 174
Query: 489 DLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
DLKP+NLL+ + +I++ DFGLS +E +K+ DK GT Y
Sbjct: 175 DLKPENLLLESKSKDANIRIIDFGLS---------THFEA-----SKKMKDK--IGTAYY 218
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
IAPEV L Y + D WS GVILY L GC PF G
Sbjct: 219 IAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNG 253
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 138/286 (48%), Gaps = 34/286 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--MEQVFAERDIMSFTDN 423
F + + +GA+G V+LV + + ++++IK R+Q MEQ+ AE +++ D+
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSS----GLERVIKTINKDRSQVPMEQIEAEIEVLKSLDH 79
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL----AVEY 479
P ++ ++ FE ++ +VME EGG+ + + ++ Y AE + A+ Y
Sbjct: 80 PNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 480 LHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
HS +VH+DLKP+N+L + IK+ DFGL+++ + D
Sbjct: 140 FHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL-------------FKSDEH---S 183
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDI 596
GT Y+APEV R K D WS GV++Y L GC+PF G + EE+ +
Sbjct: 184 TNAAGTALYMAPEVFKRDVTFK-CDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP 242
Query: 597 EWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
+ E P+ +A ++ +L ++P R +V H +F
Sbjct: 243 NYAVECR-PLTPQAVDLLKQMLTKDPERRPSAA---QVLHHEWFKQ 284
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 121/261 (46%), Gaps = 22/261 (8%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+++ G++G V L + K T Q A+K I K + + E + E ++ D+P ++ +
Sbjct: 38 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 430 YCSFETKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
Y FE K + LV E GG+ ++ D AR + + + Y+H IVHR
Sbjct: 98 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSGITYMHKNKIVHR 156
Query: 489 DLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
DLKP+NLL+ + +I++ DFGLS +E +K+ DK GT Y
Sbjct: 157 DLKPENLLLESKSKDANIRIIDFGLS---------THFEA-----SKKMKDK--IGTAYY 200
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWP 605
IAPEV L Y + D WS GVILY L GC PF G ++ +
Sbjct: 201 IAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK 259
Query: 606 IQVEAKSIITDLLQQNPRDRL 626
+ AK +I +L P R+
Sbjct: 260 VSESAKDLIRKMLTYVPSMRI 280
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 141/323 (43%), Gaps = 69/323 (21%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRF-AMKKI---IKNSLMLRNQMEQVFAERDIM 418
+ + + I GAYG V+ R + RF A+K++ M + + +V R +
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 419 SFTDNPFVVTMY--CSF-----ETKKHLCLVMEYVEGGDCASLLKNTGP-LPADMARFYF 470
+F ++P VV ++ C+ ETK L LV E+V+ L K P +P + +
Sbjct: 70 TF-EHPNVVRLFDVCTVSRTDRETK--LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 471 AETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSK-----MGLMSLATNLYEC 525
+ + +++LHS+ +VHRDLKP N+L+T+ G IKL DFGL++ M L S+ L+
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW-- 184
Query: 526 YVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPE 585
Y APEV+L+ Y PVD WS+G I E F G +
Sbjct: 185 -------------------YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
Query: 586 ELFAHTVNDDIEWPSEDDWPIQVE------------------------AKSIITDLLQQN 621
+ + D I P E+DWP V K ++ L N
Sbjct: 226 DQLGKIL-DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN 284
Query: 622 PRDRLGTGGPHEVKEHPYFSNLD 644
P R+ + HPYF +L+
Sbjct: 285 PAKRISA---YSALSHPYFQDLE 304
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
+F + K I G + VY A+KK+ LM E D++ ++P
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP----LPADMARFYFAETVLAVEYL 480
V+ Y SF L +V+E + GD + ++K+ +P YF + A+E++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
HS ++HRD+KP N+ ITA G +KL D GL + +K + +
Sbjct: 153 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRF---------------FSSKTTAAHSLV 197
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE 582
GTP Y++PE I GY D WS+G +LYE PF+G+
Sbjct: 198 GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 135/279 (48%), Gaps = 27/279 (9%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT 421
N +D+ + ++I +GA V +++ A+K+I N + M+++ E MS
Sbjct: 8 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI--NLEKCQTSMDELLKEIQAMSQC 65
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKN--------TGPLPADMARFYFAET 473
+P +V+ Y SF K L LVM+ + GG ++K+ +G L E
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
+ +EYLH G +HRD+K N+L+ G +++ DFG+S LAT + R+ +
Sbjct: 126 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF----LATG---GDITRNKVR 178
Query: 534 FSDKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTV 592
K GTP ++APEV+ + +GY D WS G+ E G P+ P ++ T+
Sbjct: 179 ---KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL 235
Query: 593 NDD---IEWPSEDDWPIQVEAKS---IITDLLQQNPRDR 625
+D +E +D ++ KS +I+ LQ++P R
Sbjct: 236 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR 274
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+++ G++G V L + K T Q A+K I K + + E + E ++ D+P + +
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 430 YCSFETKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
Y FE K + LV E GG+ ++ D AR + + + Y H IVHR
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSGITYXHKNKIVHR 150
Query: 489 DLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
DLKP+NLL+ + +I++ DFGLS +E +K+ DK GT Y
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTH---------FEA-----SKKXKDK--IGTAYY 194
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
IAPEV L Y + D WS GVILY L GC PF G
Sbjct: 195 IAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 41/293 (13%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+ + V + I G+Y HK T FA+K I K+ R+ E++ ++ + +
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK---RDPTEEI---EILLRYGQH 75
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
P ++T+ ++ K++ +V E +GG+ + A VEYLH+
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 484 GIVHRDLKPDNLL-ITALGH---IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
G+VHRDLKP N+L + G+ I++ DFG +K CY
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY------------- 182
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG---ETPEELFAHTVNDDI 596
T ++APEV+ RQGY D WS+GV+LY L G PF +TPEE+ A +
Sbjct: 183 --TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKF 240
Query: 597 E-----WPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
W S D AK +++ L +P RL V HP+ + D
Sbjct: 241 SLSGGYWNSVSD-----TAKDLVSKXLHVDPHQRLTAA---LVLRHPWIVHWD 285
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 141/299 (47%), Gaps = 35/299 (11%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
PNE + ++ + +GA+G VY ++KET A K I S ++E E +I++
Sbjct: 17 PNEV-WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILAT 72
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEY 479
D+P++V + ++ L +++E+ GG A +L+ L + + + A+ +
Sbjct: 73 CDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNF 132
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS I+HRDLK N+L+T G I+L DFG+S L +L +RD+
Sbjct: 133 LHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ--------KRDS-------F 177
Query: 540 YGTPEYIAPEVILRQG-----YGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVND 594
GTP ++APEV++ + Y D WS+G+ L E P P +
Sbjct: 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS 237
Query: 595 D---IEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLR 650
D + PS+ W VE + + L +NP R ++ EHP+ S++ N LR
Sbjct: 238 DPPTLLTPSK--W--SVEFRDFLKIALDKNPETRPSAA---QLLEHPFVSSITSNKALR 289
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 141/299 (47%), Gaps = 35/299 (11%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
PNE + ++ + +GA+G VY ++KET A K I S ++E E +I++
Sbjct: 9 PNEV-WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILAT 64
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEY 479
D+P++V + ++ L +++E+ GG A +L+ L + + + A+ +
Sbjct: 65 CDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNF 124
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LHS I+HRDLK N+L+T G I+L DFG+S L +L +RD+
Sbjct: 125 LHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ--------KRDS-------F 169
Query: 540 YGTPEYIAPEVILRQG-----YGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVND 594
GTP ++APEV++ + Y D WS+G+ L E P P +
Sbjct: 170 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS 229
Query: 595 D---IEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLDWNSLLR 650
D + PS+ W VE + + L +NP R ++ EHP+ S++ N LR
Sbjct: 230 DPPTLLTPSK--W--SVEFRDFLKIALDKNPETRPSAA---QLLEHPFVSSITSNKALR 281
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 138/319 (43%), Gaps = 69/319 (21%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRF-AMKKI---IKNSLMLRNQMEQVFAERDIM 418
+ + + I GAYG V+ R + RF A+K++ M + + +V R +
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 419 SFTDNPFVVTMY--CSF-----ETKKHLCLVMEYVEGGDCASLLKNTGP-LPADMARFYF 470
+F ++P VV ++ C+ ETK L LV E+V+ L K P +P + +
Sbjct: 70 TF-EHPNVVRLFDVCTVSRTDRETK--LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 471 AETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSK-----MGLMSLATNLYEC 525
+ + +++LHS+ +VHRDLKP N+L+T+ G IKL DFGL++ M L S+ L+
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW-- 184
Query: 526 YVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPE 585
Y APEV+L+ Y PVD WS+G I E F G +
Sbjct: 185 -------------------YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
Query: 586 ELFAHTVNDDIEWPSEDDWPIQVE------------------------AKSIITDLLQQN 621
+ + D I P E+DWP V K ++ L N
Sbjct: 226 DQLGKIL-DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN 284
Query: 622 PRDRLGTGGPHEVKEHPYF 640
P R+ + HPYF
Sbjct: 285 PAKRISA---YSALSHPYF 300
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 24/216 (11%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
E+ + +I + +GA+G VY ++KET A K I S ++E E DI++ D
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCD 92
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEYLH 481
+P +V + +F + +L +++E+ GG A +L+ PL + +T+ A+ YLH
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
I+HRDLK N+L T G IKL DFG+S ++ RD+ G
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ--------RRDS-------FIG 197
Query: 542 TPEYIAPEVILRQG-----YGKPVDWWSMGVILYEF 572
TP ++APEV++ + Y D WS+G+ L E
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 26/279 (9%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+ ++ ++ G++G V + + T+Q +A+K I K S ++ + E +++ D+P
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKLDHPN 82
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ ++ E +V E GG+ ++K D AR + + Y+H +
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI-IKQVFSGITYMHKHN 141
Query: 485 IVHRDLKPDNLLITALGH---IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
IVHRDLKP+N+L+ + IK+ DFGLS C+ +++ K K G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLST------------CF-QQNTKM---KDRIG 185
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSE 601
T YIAPEV LR Y + D WS GVILY L G PF+G+ ++ +
Sbjct: 186 TAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP 244
Query: 602 DDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
I +AK +I +L +P R+ + EHP+
Sbjct: 245 QWRTISDDAKDLIRKMLTFHPSLRI---TATQCLEHPWI 280
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
E+ + +I + +GA+G VY ++KET A K I S ++E E DI++ D
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCD 92
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEYLH 481
+P +V + +F + +L +++E+ GG A +L+ PL + +T+ A+ YLH
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
I+HRDLK N+L T G IKL DFG+S + RD+ G
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQ--------RRDS-------FIG 197
Query: 542 TPEYIAPEVILRQG-----YGKPVDWWSMGVILYEF 572
TP ++APEV++ + Y D WS+G+ L E
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 51/293 (17%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI----------IKNSLMLRNQMEQVFAER 415
+ +++ + +GA+G V+ K T + F K I +KN + + NQ+
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH------ 106
Query: 416 DIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF----YFA 471
+P ++ ++ +FE K + L++E++ GG+ L M+ Y
Sbjct: 107 -------HPKLINLHDAFEDKYEMVLILEFLSGGE---LFDRIAAEDYKMSEAEVINYMR 156
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLL--ITALGHIKLTDFGLSKMGLMSLATNLYECYVER 529
+ ++++H + IVH D+KP+N++ +K+ DFGL AT L +
Sbjct: 157 QACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGL--------ATKLNPDEIV- 207
Query: 530 DAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFA 589
K T E+ APE++ R+ G D W++GV+ Y L G PF GE E
Sbjct: 208 -------KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ 260
Query: 590 HTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
+ D E+ + + EAK I +LLQ+ PR RL H+ EHP+
Sbjct: 261 NVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTV---HDALEHPWLKG 310
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 23/234 (9%)
Query: 348 DSYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRN 406
+++ ++K K + ++DF I + G G V+ V HK + A K I ++ +RN
Sbjct: 53 EAFLTQKQKVGEL-KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN 111
Query: 407 QMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMA 466
Q + E ++ ++P++V Y +F + + + ME+++GG +LK G +P +
Sbjct: 112 Q---IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL 168
Query: 467 RFYFAETVLAVEYL-HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYEC 525
+ + YL + I+HRD+KP N+L+ + G IKL DFG+S + S+A +
Sbjct: 169 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF--- 225
Query: 526 YVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
GT Y++PE + Y D WSMG+ L E VG P
Sbjct: 226 --------------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 29/284 (10%)
Query: 348 DSYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRN 406
+++ ++K K + ++DF I + G G V+ V HK + A K I ++ +RN
Sbjct: 10 EAFLTQKQKVGEL-KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN 68
Query: 407 QMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMA 466
Q + E ++ ++P++V Y +F + + + ME+++GG +LK G +P +
Sbjct: 69 Q---IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL 125
Query: 467 RFYFAETVLAVEYLH-SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYEC 525
+ + YL + I+HRD+KP N+L+ + G IKL DFG+S + S+A +
Sbjct: 126 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF--- 182
Query: 526 YVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPE 585
GT Y++PE + Y D WSMG+ L E VG P +
Sbjct: 183 --------------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGS 228
Query: 586 ----ELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
EL + VN+ P +E + + L +NP +R
Sbjct: 229 MAIFELLDYIVNE--PPPKLPSGVFSLEFQDFVNKCLIKNPAER 270
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
E FT ++ I G++G V+ T++ A+K I + Q E ++S D
Sbjct: 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCD 78
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS 482
+P+V Y S+ L ++MEY+ GG LL+ GPL E + ++YLHS
Sbjct: 79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHS 137
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
+HRD+K N+L++ G +KL DFG +A L + ++R+ GT
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFG--------VAGQLTDTQIKRNX-------FVGT 182
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
P ++APEVI + Y D WS+G+ E G P
Sbjct: 183 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 26/217 (11%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
E+ + +I + +GA+G VY ++KET A K I S ++E E DI++ D
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCD 92
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEYLH 481
+P +V + +F + +L +++E+ GG A +L+ PL + +T+ A+ YLH
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY- 540
I+HRDLK N+L T G IKL DFG+S ++ + + +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSA----------------KNTRXIQRRDXFI 196
Query: 541 GTPEYIAPEVILRQG-----YGKPVDWWSMGVILYEF 572
GTP ++APEV++ + Y D WS+G+ L E
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 18/224 (8%)
Query: 355 DKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
++ S+ E FT + I G++G VY T++ A+K I + Q E
Sbjct: 10 NQHSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ--QE 67
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETV 474
++S D+P++ + S+ L ++MEY+ GG LLK GPL E +
Sbjct: 68 ITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK-PGPLEETYIATILREIL 126
Query: 475 LAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQF 534
++YLHS +HRD+K N+L++ G +KL DFG +A L + ++R+
Sbjct: 127 KGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFG--------VAGQLTDTQIKRNX--- 175
Query: 535 SDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
GTP ++APEVI + Y D WS+G+ E G P
Sbjct: 176 ----FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 23/234 (9%)
Query: 348 DSYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRN 406
+++ ++K K + ++DF I + G G V+ V HK + A K I ++ +RN
Sbjct: 18 EAFLTQKQKVGEL-KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN 76
Query: 407 QMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMA 466
Q + E ++ ++P++V Y +F + + + ME+++GG +LK G +P +
Sbjct: 77 Q---IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL 133
Query: 467 RFYFAETVLAVEYL-HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYEC 525
+ + YL + I+HRD+KP N+L+ + G IKL DFG+S + S+A +
Sbjct: 134 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF--- 190
Query: 526 YVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
GT Y++PE + Y D WSMG+ L E VG P
Sbjct: 191 --------------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 26/279 (9%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+ ++ ++ G++G V + + T+Q +A+K I K S ++ + E +++ D+P
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKLDHPN 82
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ ++ E +V E GG+ ++K D AR + + Y+H +
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI-IKQVFSGITYMHKHN 141
Query: 485 IVHRDLKPDNLLITALGH---IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
IVHRDLKP+N+L+ + IK+ DFGLS C+ +++ K K G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLST------------CF-QQNTKM---KDRIG 185
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSE 601
T YIAPEV LR Y + D WS GVILY L G PF+G+ ++ +
Sbjct: 186 TAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP 244
Query: 602 DDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
I +AK +I +L +P R+ + EHP+
Sbjct: 245 QWRTISDDAKDLIRKMLTFHPSLRITAT---QCLEHPWI 280
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 26/279 (9%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+ ++ ++ G++G V + + T+Q +A+K I K S ++ + E +++ D+P
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKLDHPN 82
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ ++ E +V E GG+ ++K D AR + + Y+H +
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARI-IKQVFSGITYMHKHN 141
Query: 485 IVHRDLKPDNLLITALGH---IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
IVHRDLKP+N+L+ + IK+ DFGLS C+ +++ K K G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLST------------CF-QQNTKM---KDRIG 185
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSE 601
T YIAPEV LR Y + D WS GVILY L G PF+G+ ++ +
Sbjct: 186 TAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP 244
Query: 602 DDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
I +AK +I +L +P R+ + EHP+
Sbjct: 245 QWRTISDDAKDLIRKMLTFHPSLRITAT---QCLEHPWI 280
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 18/222 (8%)
Query: 357 FSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERD 416
F E FT ++ I G++G V+ T++ A+K I + Q E
Sbjct: 20 FQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEIT 77
Query: 417 IMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA 476
++S D+P+V Y S+ L ++MEY+ GG LL+ GPL E +
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKG 136
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
++YLHS +HRD+K N+L++ G +KL DFG +A L + ++R+
Sbjct: 137 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFG--------VAGQLTDTQIKRNT----- 183
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
GTP ++APEVI + Y D WS+G+ E G P
Sbjct: 184 --FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
E FT ++ I G++G V+ T++ A+K I + Q E ++S D
Sbjct: 6 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCD 63
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS 482
+P+V Y S+ L ++MEY+ GG LL+ GPL E + ++YLHS
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHS 122
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
+HRD+K N+L++ G +KL DFG +A L + ++R+ GT
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFG--------VAGQLTDTQIKRNT-------FVGT 167
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
P ++APEVI + Y D WS+G+ E G P
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 29/266 (10%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+ ++ I G++G LV+ E +++ +K+I S M + E+ E +++ +P
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEI-NISRMSSKEREESRREVAVLANMKHPN 84
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLK-NTGPL-PADMARFYFAETVLAVEYLHSY 483
+V SFE L +VM+Y EGGD + G L D +F + LA++++H
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR 144
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
I+HRD+K N+ +T G ++L DFG++++ L S C GTP
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARV-LNSTVELARAC--------------IGTP 189
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDD 603
Y++PE+ + Y D W++G +LYE F + + L ++ +P
Sbjct: 190 YYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS--FP---- 243
Query: 604 WPIQV----EAKSIITDLLQQNPRDR 625
P+ + + +S+++ L ++NPRDR
Sbjct: 244 -PVSLHYSYDLRSLVSQLFKRNPRDR 268
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 125/281 (44%), Gaps = 29/281 (10%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+ + + + GA+G V+ V + T FA K ++ + E V E MS +P
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPT 109
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
+V ++ +FE + ++ E++ GG+ + + D A Y + + ++H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 485 IVHRDLKPDNLLITAL--GHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
VH DLKP+N++ T +KL DFGL+ D KQ S K GT
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLT---------------AHLDPKQ-SVKVTTGT 213
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSED 602
E+ APEV + G D WS+GV+ Y L G PF GE +E + + D W +D
Sbjct: 214 AEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCD--WNMDD 271
Query: 603 DW--PIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
I + K I LL +P R+ H+ EHP+ +
Sbjct: 272 SAFSGISEDGKDFIRKLLLADPNTRMTI---HQALEHPWLT 309
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
E FT ++ I G++G V+ T++ A+K I + Q E ++S D
Sbjct: 6 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCD 63
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS 482
+P+V Y S+ L ++MEY+ GG LL+ GPL E + ++YLHS
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHS 122
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
+HRD+K N+L++ G +KL DFG +A L + ++R+ GT
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFG--------VAGQLTDTQIKRNX-------FVGT 167
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
P ++APEVI + Y D WS+G+ E G P
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 123/275 (44%), Gaps = 29/275 (10%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
+ GA+G V+ V + T FA K ++ + E V E MS +P +V ++
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLVNLHD 221
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNT-GPLPADMARFYFAETVLAVEYLHSYGIVHRDL 490
+FE + ++ E++ GG+ + + + D A Y + + ++H VH DL
Sbjct: 222 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDL 281
Query: 491 KPDNLLITAL--GHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAP 548
KP+N++ T +KL DFGL+ D KQ S K GT E+ AP
Sbjct: 282 KPENIMFTTKRSNELKLIDFGLT---------------AHLDPKQ-SVKVTTGTAEFAAP 325
Query: 549 EVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDW--PI 606
EV + G D WS+GV+ Y L G PF GE +E + + D W +D I
Sbjct: 326 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCD--WNMDDSAFSGI 383
Query: 607 QVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
+ K I LL +P R+ H+ EHP+ +
Sbjct: 384 SEDGKDFIRKLLLADPNTRMTI---HQALEHPWLT 415
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 34/276 (12%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKN-----SLMLRNQMEQVFAERDIMSF 420
+ + +++ G V+L R + A+K + + S LR + E A +
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA-----AA 68
Query: 421 TDNPFVVTMYCSFETKKHLC----LVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA 476
++P +V +Y + E + +VMEYV+G ++ GP+ A A+ A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ + H GI+HRD+KP N++I+A +K+ DFG+++ +
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR------------AIADSGNSVTQT 176
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDW----WSMGVILYEFLVGCVPFFGETPEELFAHTV 592
V GT +Y++PE Q G VD +S+G +LYE L G PF G++P+ + V
Sbjct: 177 AAVIGTAQYLSPE----QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHV 232
Query: 593 NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT 628
+D PS + + +++ L +NP +R T
Sbjct: 233 REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQT 268
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 34/276 (12%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKN-----SLMLRNQMEQVFAERDIMSF 420
+ + +++ G V+L R + A+K + + S LR + E A +
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA-----AA 68
Query: 421 TDNPFVVTMYCSFETKKHLC----LVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA 476
++P +V +Y + E + +VMEYV+G ++ GP+ A A+ A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ + H GI+HRD+KP N+LI+A +K+ DFG+++ +
Sbjct: 129 LNFSHQNGIIHRDVKPANILISATNAVKVVDFGIAR------------AIADSGNSVXQT 176
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDW----WSMGVILYEFLVGCVPFFGETPEELFAHTV 592
V GT +Y++PE Q G VD +S+G +LYE L G PF G++P + V
Sbjct: 177 AAVIGTAQYLSPE----QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 232
Query: 593 NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT 628
+D PS + + +++ L +NP +R T
Sbjct: 233 REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQT 268
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 34/278 (12%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKN-----SLMLRNQMEQVFAERDIMSF 420
+ + +++ G V+L R + A+K + + S LR + E A +
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNA-----AA 68
Query: 421 TDNPFVVTMYCSFETKKHLC----LVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA 476
++P +V +Y + E + +VMEYV+G ++ GP+ A A+ A
Sbjct: 69 LNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ + H GI+HRD+KP N++I+A +K+ DFG+++ +
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR------------AIADSGNSVTQT 176
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDW----WSMGVILYEFLVGCVPFFGETPEELFAHTV 592
V GT +Y++PE Q G VD +S+G +LYE L G PF G++P + V
Sbjct: 177 AAVIGTAQYLSPE----QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 232
Query: 593 NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGG 630
+D PS + + +++ L +NP +R T
Sbjct: 233 REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 270
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
E FT ++ I G++G V+ T+Q A+K I + Q E ++S D
Sbjct: 22 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCD 79
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS 482
+ +V Y S+ L ++MEY+ GG LL+ GP E + ++YLHS
Sbjct: 80 SSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR-AGPFDEFQIATMLKEILKGLDYLHS 138
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
+HRD+K N+L++ G +KL DFG +A L + ++R+ GT
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFG--------VAGQLTDTQIKRNT-------FVGT 183
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
P ++APEVI + Y D WS+G+ E G P
Sbjct: 184 PFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 24/265 (9%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIMSFT 421
++DF I + G G V+ V HK + A K I ++ +RNQ + E ++
Sbjct: 8 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQVLHEC 64
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL- 480
++P++V Y +F + + + ME+++GG +LK G +P + + + YL
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 124
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
+ I+HRD+KP N+L+ + G IKL DFG+S ++ A +F
Sbjct: 125 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------LIDEMANEF-----V 167
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPS 600
GT Y++PE + Y D WSMG+ L E VG P EL + VN+ P
Sbjct: 168 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNE--PPPK 225
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+E + + L +NP +R
Sbjct: 226 LPSAVFSLEFQDFVNKCLIKNPAER 250
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIMSFT 421
++DF I + G G V+ V HK + A K I ++ +RNQ + E ++
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQVLHEC 61
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLH 481
++P++V Y +F + + + ME+++GG +LK G +P + + + YL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 482 -SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
+ I+HRD+KP N+L+ + G IKL DFG+S + S+A +
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-----------------V 164
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
GT Y++PE + Y D WSMG+ L E VG P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 375 GAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFE 434
G +G VY ++KET A K I S ++E E DI++ D+P +V + +F
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 435 TKKHLCLVMEYVEGGDC-ASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPD 493
+ +L +++E+ GG A +L+ PL + +T+ A+ YLH I+HRDLK
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 137
Query: 494 NLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILR 553
N+L T G IKL DFG+S A N RD+ GTP ++APEV++
Sbjct: 138 NILFTLDGDIKLADFGVS-------AKNTRTXIQRRDS-------FIGTPYWMAPEVVMC 183
Query: 554 QG-----YGKPVDWWSMGVILYEF 572
+ Y D WS+G+ L E
Sbjct: 184 ETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIMSFT 421
++DF I + G G V+ V HK + A K I ++ +RNQ + E ++
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQVLHEC 61
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL- 480
++P++V Y +F + + + ME+++GG +LK G +P + + + YL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
+ I+HRD+KP N+L+ + G IKL DFG+S + S+A +
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-----------------V 164
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
GT Y++PE + Y D WSMG+ L E VG P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 34/278 (12%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKN-----SLMLRNQMEQVFAERDIMSF 420
+ + +++ G V+L R + A+K + + S LR + E A +
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA-----AA 68
Query: 421 TDNPFVVTMYCSFETKKHLC----LVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA 476
++P +V +Y + E + +VMEYV+G ++ GP+ A A+ A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ + H GI+HRD+KP N++I+A +K+ DFG+++ +
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR------------AIADSGNSVTQT 176
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDW----WSMGVILYEFLVGCVPFFGETPEELFAHTV 592
V GT +Y++PE Q G VD +S+G +LYE L G PF G++P + V
Sbjct: 177 AAVIGTAQYLSPE----QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 232
Query: 593 NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGG 630
+D PS + + +++ L +NP +R T
Sbjct: 233 REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 270
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIMSFT 421
++DF I + G G V+ V HK + A K I ++ +RNQ + E ++
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQVLHEC 61
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL- 480
++P++V Y +F + + + ME+++GG +LK G +P + + + YL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
+ I+HRD+KP N+L+ + G IKL DFG+S + S+A +
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-----------------V 164
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
GT Y++PE + Y D WSMG+ L E VG P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 34/278 (12%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKN-----SLMLRNQMEQVFAERDIMSF 420
+ + +++ G V+L R + A+K + + S LR + E A +
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNA-----AA 68
Query: 421 TDNPFVVTMYCSFETKKHLC----LVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA 476
++P +V +Y + E + +VMEYV+G ++ GP+ A A+ A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ + H GI+HRD+KP N++I+A +K+ DFG+++ +
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR------------AIADSGNSVTQT 176
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDW----WSMGVILYEFLVGCVPFFGETPEELFAHTV 592
V GT +Y++PE Q G VD +S+G +LYE L G PF G++P + V
Sbjct: 177 AAVIGTAQYLSPE----QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 232
Query: 593 NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGG 630
+D PS + + +++ L +NP +R T
Sbjct: 233 REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 270
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIMSFT 421
++DF I + G G V+ V HK + A K I ++ +RNQ + E ++
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQVLHEC 61
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL- 480
++P++V Y +F + + + ME+++GG +LK G +P + + + YL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
+ I+HRD+KP N+L+ + G IKL DFG+S + S+A +
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-----------------V 164
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
GT Y++PE + Y D WSMG+ L E VG P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIMSFT 421
++DF I + G G V+ V HK + A K I ++ +RNQ + E ++
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQVLHEC 61
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL- 480
++P++V Y +F + + + ME+++GG +LK G +P + + + YL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
+ I+HRD+KP N+L+ + G IKL DFG+S + S+A +
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-----------------V 164
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
GT Y++PE + Y D WSMG+ L E VG P
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 33/216 (15%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD--NPFVVTM 429
+ G++G V+ + K+T + A+KK+ +VF ++M+ +P +V +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV----------RLEVFRAEELMACAGLTSPRIVPL 150
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRD 489
Y + + + ME +EGG L+K G LP D A +Y + + +EYLHS I+H D
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 210
Query: 490 LKPDNLLITALG-HIKLTDFG----LSKMGL-MSLATNLYECYVERDAKQFSDKQVYGTP 543
+K DN+L+++ G H L DFG L GL SL T Y + GT
Sbjct: 211 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY---------------IPGTE 255
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
++APEV+L + VD WS ++ L GC P+
Sbjct: 256 THMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 127/270 (47%), Gaps = 37/270 (13%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+++ G G V H+ T Q+ A+K ++ +S R +++ + + P +V +
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCALK-LLYDSPKARQEVDHHWQA------SGGPHIVCI 68
Query: 430 YCSFETKKH----LCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLAVEYLHSY 483
+E H L ++ME +EGG+ S ++ G A + A+++LHS+
Sbjct: 69 LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 128
Query: 484 GIVHRDLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
I HRD+KP+NLL T+ +KLTDFG +K + CY
Sbjct: 129 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT--PCY-------------- 172
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN----DDI 596
TP Y+APEV+ + Y K D WS+GVI+Y L G PF+ T + +
Sbjct: 173 -TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY 231
Query: 597 EWPSEDDWPIQVEAKSIITDLLQQNPRDRL 626
+P+ + + +AK +I LL+ +P +RL
Sbjct: 232 GFPNPEWSEVSEDAKQLIRLLLKTDPTERL 261
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 120/247 (48%), Gaps = 29/247 (11%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKI-IKNS--LMLRNQMEQVFAERDIMSFTDNPFVVT 428
I GAYG+VY R + A+K + + N + + + +V R + +F ++P VV
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF-EHPNVVR 70
Query: 429 MYCSFETKK-----HLCLVMEYVEGGDCASLLKNTGP--LPADMARFYFAETVLAVEYLH 481
+ T + + LV E+V+ D + L P LPA+ + + + +++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+ IVHRDLKP+N+L+T+ G +KL DFGL+++ + Q + V
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARI----------------YSYQMALAPVVV 173
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSE 601
T Y APEV+L+ Y PVD WS+G I E F G + + + D I P E
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG-KIFDLIGLPPE 232
Query: 602 DDWPIQV 608
DDWP V
Sbjct: 233 DDWPRDV 239
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 120/247 (48%), Gaps = 29/247 (11%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKI-IKNS--LMLRNQMEQVFAERDIMSFTDNPFVVT 428
I GAYG+VY R + A+K + + N + + + +V R + +F ++P VV
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF-EHPNVVR 70
Query: 429 MYCSFETKK-----HLCLVMEYVEGGDCASLLKNTGP--LPADMARFYFAETVLAVEYLH 481
+ T + + LV E+V+ D + L P LPA+ + + + +++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+ IVHRDLKP+N+L+T+ G +KL DFGL+++ +A + V
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALD----------------PVVV 173
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSE 601
T Y APEV+L+ Y PVD WS+G I E F G + + + D I P E
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG-KIFDLIGLPPE 232
Query: 602 DDWPIQV 608
DDWP V
Sbjct: 233 DDWPRDV 239
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 44/293 (15%)
Query: 364 NDFTVI-KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+D+ V +++ G G V + +K T+++FA+K ++++ R ++E + +
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRA------SQ 113
Query: 423 NPFVVTMYCSFET----KKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLA 476
P +V + +E +K L +VME ++GG+ S +++ G A A
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 173
Query: 477 VEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSK--MGLMSLATNLYECYVERDA 531
++YLHS I HRD+KP+NLL T+ +KLTDFG +K SL T CY
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT---PCY----- 225
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE----TPEEL 587
TP Y+APEV+ + Y K D WS+GVI+Y L G PF+ +
Sbjct: 226 ----------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 275
Query: 588 FAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
E+P+ + + E K +I +LL+ P R+ E HP+
Sbjct: 276 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT---EFMNHPWI 325
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 127/270 (47%), Gaps = 37/270 (13%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+++ G G V H+ T Q+ A+K ++ +S R +++ + + P +V +
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALK-LLYDSPKARQEVDHHWQA------SGGPHIVCI 87
Query: 430 YCSFETKKH----LCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLAVEYLHSY 483
+E H L ++ME +EGG+ S ++ G A + A+++LHS+
Sbjct: 88 LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 147
Query: 484 GIVHRDLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
I HRD+KP+NLL T+ +KLTDFG +K + CY
Sbjct: 148 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT--PCY-------------- 191
Query: 541 GTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN----DDI 596
TP Y+APEV+ + Y K D WS+GVI+Y L G PF+ T + +
Sbjct: 192 -TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY 250
Query: 597 EWPSEDDWPIQVEAKSIITDLLQQNPRDRL 626
+P+ + + +AK +I LL+ +P +RL
Sbjct: 251 GFPNPEWSEVSEDAKQLIRLLLKTDPTERL 280
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 36/288 (12%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIK------NSLMLRNQMEQVFAERDIM-SFTD 422
+++ G V HK T + +A+K I ++ ++ E E DI+ +
Sbjct: 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS 482
+P ++ + ++ET LV + ++ G+ L L R + + LH
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
IVHRDLKP+N+L+ +IKLTDFG S C ++ K ++V GT
Sbjct: 143 LNIVHRDLKPENILLDDDMNIKLTDFGFS-------------CQLDPGEKL---REVCGT 186
Query: 543 PEYIAPEVIL------RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDI 596
P Y+APE+I GYGK VD WS GVI+Y L G PF+ + ++ +
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY 246
Query: 597 EW--PSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
++ P DD+ V K +++ L P+ R E HP+F
Sbjct: 247 QFGSPEWDDYSDTV--KDLVSRFLVVQPQKRYTA---EEALAHPFFQQ 289
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 44/293 (15%)
Query: 364 NDFTVI-KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+D+ V +++ G G V + +K T+++FA+K ++++ R ++E + +
Sbjct: 67 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRA------SQ 119
Query: 423 NPFVVTMYCSFET----KKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLA 476
P +V + +E +K L +VME ++GG+ S +++ G A A
Sbjct: 120 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 179
Query: 477 VEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSK--MGLMSLATNLYECYVERDA 531
++YLHS I HRD+KP+NLL T+ +KLTDFG +K SL T CY
Sbjct: 180 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT---PCY----- 231
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE----TPEEL 587
TP Y+APEV+ + Y K D WS+GVI+Y L G PF+ +
Sbjct: 232 ----------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 281
Query: 588 FAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
E+P+ + + E K +I +LL+ P R+ E HP+
Sbjct: 282 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT---EFMNHPWI 331
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 119/250 (47%), Gaps = 32/250 (12%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLR-----NQMEQVFAERDIMSFTDNPF 425
I GAYG+VY R + A+K + + N + + +V R + +F ++P
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAF-EHPN 75
Query: 426 VVTMYCSFETKK-----HLCLVMEYVEGGDCASLLKNTGP--LPADMARFYFAETVLAVE 478
VV + T + + LV E+V+ D + L P LPA+ + + + ++
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 134
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
+LH+ IVHRDLKP+N+L+T+ G +KL DFGL+++ + Q +
Sbjct: 135 FLHANCIVHRDLKPENILVTSGGTVKLADFGLARI----------------YSYQMALTP 178
Query: 539 VYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEW 598
V T Y APEV+L+ Y PVD WS+G I E F G + + + D I
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG-KIFDLIGL 237
Query: 599 PSEDDWPIQV 608
P EDDWP V
Sbjct: 238 PPEDDWPRDV 247
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 44/293 (15%)
Query: 364 NDFTVI-KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+D+ V +++ G G V + +K T+++FA+K ++++ R ++E + +
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRA------SQ 69
Query: 423 NPFVVTMYCSFET----KKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLA 476
P +V + +E +K L +VME ++GG+ S +++ G A A
Sbjct: 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 477 VEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSK--MGLMSLATNLYECYVERDA 531
++YLHS I HRD+KP+NLL T+ +KLTDFG +K SL T CY
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT---PCY----- 181
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE----TPEEL 587
TP Y+APEV+ + Y K D WS+GVI+Y L G PF+ +
Sbjct: 182 ----------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 231
Query: 588 FAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
E+P+ + + E K +I +LL+ P R+ E HP+
Sbjct: 232 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT---EFMNHPWI 281
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 120/247 (48%), Gaps = 29/247 (11%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKI-IKNS--LMLRNQMEQVFAERDIMSFTDNPFVVT 428
I GAYG+VY R + A+K + + N + + + +V R + +F ++P VV
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF-EHPNVVR 70
Query: 429 MYCSFETKK-----HLCLVMEYVEGGDCASLLKNTGP--LPADMARFYFAETVLAVEYLH 481
+ T + + LV E+V+ D + L P LPA+ + + + +++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+ IVHRDLKP+N+L+T+ G +KL DFGL++ + S L+ V
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLAR--IYSYQMALFPVVV-------------- 173
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSE 601
T Y APEV+L+ Y PVD WS+G I E F G + + + D I P E
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG-KIFDLIGLPPE 232
Query: 602 DDWPIQV 608
DDWP V
Sbjct: 233 DDWPRDV 239
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 34/276 (12%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKN-----SLMLRNQMEQVFAERDIMSF 420
+ + +++ G V+L R + A+K + + S LR + E A +
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNA-----AA 85
Query: 421 TDNPFVVTMYCSFETKKHLC----LVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA 476
++P +V +Y + E + +VMEYV+G ++ GP+ A A+ A
Sbjct: 86 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 145
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ + H GI+HRD+KP N++I+A +K+ DFG+++ +
Sbjct: 146 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR------------AIADSGNSVTQT 193
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDW----WSMGVILYEFLVGCVPFFGETPEELFAHTV 592
V GT +Y++PE Q G VD +S+G +LYE L G PF G++P + V
Sbjct: 194 AAVIGTAQYLSPE----QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 249
Query: 593 NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGT 628
+D PS + + +++ L +NP +R T
Sbjct: 250 REDPIPPSARHEGLSADLDAVVLKALAKNPENRYQT 285
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 44/293 (15%)
Query: 364 NDFTVI-KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+D+ V +++ G G V + +K T+++FA+K ++++ R ++E + +
Sbjct: 21 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRA------SQ 73
Query: 423 NPFVVTMYCSFET----KKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLA 476
P +V + +E +K L +VME ++GG+ S +++ G A A
Sbjct: 74 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 133
Query: 477 VEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSK--MGLMSLATNLYECYVERDA 531
++YLHS I HRD+KP+NLL T+ +KLTDFG +K SL T CY
Sbjct: 134 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT---PCY----- 185
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE----TPEEL 587
TP Y+APEV+ + Y K D WS+GVI+Y L G PF+ +
Sbjct: 186 ----------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 235
Query: 588 FAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
E+P+ + + E K +I +LL+ P R+ E HP+
Sbjct: 236 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT---EFMNHPWI 285
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 44/293 (15%)
Query: 364 NDFTVI-KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+D+ V +++ G G V + +K T+++FA+K ++++ R ++E + +
Sbjct: 23 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRA------SQ 75
Query: 423 NPFVVTMYCSFET----KKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLA 476
P +V + +E +K L +VME ++GG+ S +++ G A A
Sbjct: 76 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 135
Query: 477 VEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSK--MGLMSLATNLYECYVERDA 531
++YLHS I HRD+KP+NLL T+ +KLTDFG +K SL T CY
Sbjct: 136 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT---PCY----- 187
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE----TPEEL 587
TP Y+APEV+ + Y K D WS+GVI+Y L G PF+ +
Sbjct: 188 ----------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 237
Query: 588 FAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
E+P+ + + E K +I +LL+ P R+ E HP+
Sbjct: 238 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT---EFMNHPWI 287
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 36/288 (12%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIK------NSLMLRNQMEQVFAERDIM-SFTD 422
+++ G V HK T + +A+K I ++ ++ E E DI+ +
Sbjct: 10 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 69
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS 482
+P ++ + ++ET LV + ++ G+ L L R + + LH
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 129
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
IVHRDLKP+N+L+ +IKLTDFG S C ++ K ++V GT
Sbjct: 130 LNIVHRDLKPENILLDDDMNIKLTDFGFS-------------CQLDPGEKL---REVCGT 173
Query: 543 PEYIAPEVIL------RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDI 596
P Y+APE+I GYGK VD WS GVI+Y L G PF+ + ++ +
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY 233
Query: 597 EW--PSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
++ P DD+ V K +++ L P+ R E HP+F
Sbjct: 234 QFGSPEWDDYSDTV--KDLVSRFLVVQPQKRYTA---EEALAHPFFQQ 276
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 44/293 (15%)
Query: 364 NDFTVI-KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+D+ V +++ G G V + +K T+++FA+K ++++ R ++E + +
Sbjct: 22 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRA------SQ 74
Query: 423 NPFVVTMYCSFET----KKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLA 476
P +V + +E +K L +VME ++GG+ S +++ G A A
Sbjct: 75 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 134
Query: 477 VEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSK--MGLMSLATNLYECYVERDA 531
++YLHS I HRD+KP+NLL T+ +KLTDFG +K SL T CY
Sbjct: 135 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT---PCY----- 186
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE----TPEEL 587
TP Y+APEV+ + Y K D WS+GVI+Y L G PF+ +
Sbjct: 187 ----------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 236
Query: 588 FAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
E+P+ + + E K +I +LL+ P R+ E HP+
Sbjct: 237 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT---EFMNHPWI 286
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 44/293 (15%)
Query: 364 NDFTVI-KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+D+ V +++ G G V + +K T+++FA+K ++++ R ++E + +
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRA------SQ 67
Query: 423 NPFVVTMYCSFET----KKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLA 476
P +V + +E +K L +VME ++GG+ S +++ G A A
Sbjct: 68 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 477 VEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSK--MGLMSLATNLYECYVERDA 531
++YLHS I HRD+KP+NLL T+ +KLTDFG +K SL T CY
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT---PCY----- 179
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE----TPEEL 587
TP Y+APEV+ + Y K D WS+GVI+Y L G PF+ +
Sbjct: 180 ----------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 229
Query: 588 FAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
E+P+ + + E K +I +LL+ P R+ E HP+
Sbjct: 230 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT---EFMNHPWI 279
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 44/293 (15%)
Query: 364 NDFTVI-KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+D+ V +++ G G V + +K T+++FA+K ++++ R ++E + +
Sbjct: 16 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRA------SQ 68
Query: 423 NPFVVTMYCSFET----KKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLA 476
P +V + +E +K L +VME ++GG+ S +++ G A A
Sbjct: 69 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 128
Query: 477 VEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSK--MGLMSLATNLYECYVERDA 531
++YLHS I HRD+KP+NLL T+ +KLTDFG +K SL T CY
Sbjct: 129 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT---PCY----- 180
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE----TPEEL 587
TP Y+APEV+ + Y K D WS+GVI+Y L G PF+ +
Sbjct: 181 ----------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 230
Query: 588 FAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
E+P+ + + E K +I +LL+ P R+ E HP+
Sbjct: 231 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT---EFMNHPWI 280
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 44/293 (15%)
Query: 364 NDFTVI-KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+D+ V +++ G G V + +K T+++FA+K ++++ R ++E + +
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRA------SQ 69
Query: 423 NPFVVTMYCSFET----KKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLA 476
P +V + +E +K L +VME ++GG+ S +++ G A A
Sbjct: 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 477 VEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSK--MGLMSLATNLYECYVERDA 531
++YLHS I HRD+KP+NLL T+ +KLTDFG +K SL T CY
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT---PCY----- 181
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE----TPEEL 587
TP Y+APEV+ + Y K D WS+GVI+Y L G PF+ +
Sbjct: 182 ----------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 231
Query: 588 FAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
E+P+ + + E K +I +LL+ P R+ E HP+
Sbjct: 232 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT---EFMNHPWI 281
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 23/211 (10%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD--NPFVVTM 429
+ G++G V+ + K+T + A+KK+ +VF ++M+ +P +V +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV----------RLEVFRAEELMACAGLTSPRIVPL 131
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRD 489
Y + + + ME +EGG L+K G LP D A +Y + + +EYLHS I+H D
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 191
Query: 490 LKPDNLLITALG-HIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAP 548
+K DN+L+++ G H L DFG A L + +D + + GT ++AP
Sbjct: 192 VKADNVLLSSDGSHAALCDFG--------HAVCLQPDGLGKDL--LTGDYIPGTETHMAP 241
Query: 549 EVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
EV+L + VD WS ++ L GC P+
Sbjct: 242 EVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 113/234 (48%), Gaps = 23/234 (9%)
Query: 348 DSYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRN 406
+++ ++K K + ++DF I + G G V V+H+ + A K I ++ +RN
Sbjct: 1 EAFLTQKAKVGEL-KDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN 59
Query: 407 QMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMA 466
Q + E ++ ++P++V Y +F + + + ME+++GG +LK +P ++
Sbjct: 60 Q---IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEIL 116
Query: 467 RFYFAETVLAVEYLH-SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYEC 525
+ + YL + I+HRD+KP N+L+ + G IKL DFG+S + S+A +
Sbjct: 117 GKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF--- 173
Query: 526 YVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE + Y D WSMG+ L E VG P
Sbjct: 174 --------------VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 127/288 (44%), Gaps = 36/288 (12%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIK------NSLMLRNQMEQVFAERDIM-SFTD 422
+++ G V HK T + +A+K I ++ ++ E E DI+ +
Sbjct: 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS 482
+P ++ + ++ET LV + ++ G+ L L R + + LH
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
IVHRDLKP+N+L+ +IKLTDFG S C ++ K + V GT
Sbjct: 143 LNIVHRDLKPENILLDDDMNIKLTDFGFS-------------CQLDPGEKL---RSVCGT 186
Query: 543 PEYIAPEVIL------RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDI 596
P Y+APE+I GYGK VD WS GVI+Y L G PF+ + ++ +
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY 246
Query: 597 EW--PSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
++ P DD+ V K +++ L P+ R E HP+F
Sbjct: 247 QFGSPEWDDYSDTV--KDLVSRFLVVQPQKRYTA---EEALAHPFFQQ 289
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 44/293 (15%)
Query: 364 NDFTVI-KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+D+ V +++ G G V + +K T+++FA+K ++++ R ++E + +
Sbjct: 31 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRA------SQ 83
Query: 423 NPFVVTMYCSFET----KKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLA 476
P +V + +E +K L +VME ++GG+ S +++ G A A
Sbjct: 84 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 143
Query: 477 VEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSK--MGLMSLATNLYECYVERDA 531
++YLHS I HRD+KP+NLL T+ +KLTDFG +K SL T CY
Sbjct: 144 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT---PCY----- 195
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE----TPEEL 587
TP Y+APEV+ + Y K D WS+GVI+Y L G PF+ +
Sbjct: 196 ----------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 245
Query: 588 FAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
E+P+ + + E K +I +LL+ P R+ E HP+
Sbjct: 246 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT---EFMNHPWI 295
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 42/292 (14%)
Query: 364 NDFTVI-KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+D+ V +++ G G V + +K T+++FA+K ++++ R ++E + +
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRA------SQ 67
Query: 423 NPFVVTMYCSFET----KKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLA 476
P +V + +E +K L +VME ++GG+ S +++ G A A
Sbjct: 68 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 477 VEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYE-CYVERDAK 532
++YLHS I HRD+KP+NLL T+ +KLTDFG +K + +L E CY
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSLTEPCY------ 179
Query: 533 QFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE----TPEELF 588
TP Y+APEV+ + Y K D WS+GVI+Y L G PF+ +
Sbjct: 180 ---------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK 230
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
E+P+ + + E K +I +LL+ P R+ E HP+
Sbjct: 231 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT---EFMNHPWI 279
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 119/250 (47%), Gaps = 18/250 (7%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD--- 422
+ ++K + GAYG V+ + T + A+KKI +N + R+IM T+
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD---AFQNSTDAQRTFREIMILTELSG 67
Query: 423 --NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
N + + + + LV +Y+E A + N L ++ + + ++YL
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANI--LEPVHKQYVVYQLIKVIKYL 125
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL-MSLATNLYECYVERDAKQFSDKQ- 538
HS G++HRD+KP N+L+ A H+K+ DFGLS+ + + TN + + + F D Q
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 539 ----VYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN 593
T Y APE++L Y K +D WS+G IL E L G F G + +
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Query: 594 DDIEWPSEDD 603
I++PS +D
Sbjct: 246 -VIDFPSNED 254
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEIXIN 58
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + ++ +
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-------------FRYNNRERLLNK 165
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
+ GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEIXIN 59
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + ++ +
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-------------FRYNNRERLLNK 166
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
+ GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 167 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEIXIN 58
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 166
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 167 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 58
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 166
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 167 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 59
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 167
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 168 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 58
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + ++ +
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-------------FRYNNRERLLNK 165
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
+ GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 58
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + ++ +
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-------------FRYNNRERLLNK 165
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
+ GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 114/222 (51%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 59
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
+ ++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 60 AMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 167
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 168 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 1 APFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 57
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 58 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 117
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 118 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 165
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 166 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 58
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + ++ +
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV-------------FRYNNRERLLNK 165
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
+ GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 58
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 166
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 167 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 29/263 (11%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY 430
++ G YG VY R + R A+K+I + + + A + + +V
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN---IVQYL 85
Query: 431 CSFETKKHLCLVMEYVEGGDCASLLKNT-GPLPAD--MARFYFAETVLAVEYLHSYGIVH 487
SF + + ME V GG ++LL++ GPL + FY + + ++YLH IVH
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 488 RDLKPDNLLI-TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYI 546
RD+K DN+LI T G +K++DFG SK + C + F+ GT +Y+
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKR-----LAGINPC-----TETFT-----GTLQYM 190
Query: 547 APEVILR--QGYGKPVDWWSMGVILYEFLVGCVPFF--GETPEELFAHTVNDDIEWPSED 602
APE+I + +GYGK D WS+G + E G PF+ GE +F + + E
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM---FKVHPEI 247
Query: 603 DWPIQVEAKSIITDLLQQNPRDR 625
+ EAK+ I + +P R
Sbjct: 248 PESMSAEAKAFILKCFEPDPDKR 270
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 59
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 167
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 168 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 59
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 167
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 168 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 141/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 61
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E+V+ D ++L TG +P + + Y + +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 117
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 168
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 169 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 223 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 282
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 283 A---ALAHPFFQDV 293
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 59
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 167
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 168 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 58
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 166
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 167 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 59
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 167
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 168 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 58
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 166
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 167 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 58
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 166
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 167 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 59
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 167
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 168 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GAYG V L ++ T + A+K + +K ++ + E + E I
Sbjct: 2 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 58
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 166
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 167 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 58
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASAL---TG-IPLPLIKSYLFQLLQ 114
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP+NLLI G IKL DFGL++ + + T +E
Sbjct: 115 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 165
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 280 A---ALAHPFFQDV 290
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 60
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 116
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP+NLLI G IKL DFGL++ + + T +E
Sbjct: 117 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 167
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 168 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 222 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 281
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 282 A---ALAHPFFQDV 292
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 59
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 115
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP+NLLI G IKL DFGL++ + + T +E
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 166
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 167 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 221 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 280
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 281 A---ALAHPFFQDV 291
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 138/311 (44%), Gaps = 56/311 (18%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 57
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLAVE 478
++P +V + T+ L LV E+V D + + + +P + + Y + + +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
+ HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------------ 164
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----AHTV 592
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 165 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 593 NDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTGGPH 632
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA-- 279
Query: 633 EVKEHPYFSNL 643
HP+F ++
Sbjct: 280 -ALAHPFFQDV 289
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 61
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 117
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP+NLLI G IKL DFGL++ + + T +E
Sbjct: 118 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 168
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 169 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 223 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 282
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 283 A---ALAHPFFQDV 293
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 27/285 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI-MSFTD 422
+D I + GAYG V +RH + Q A+K+I + + + +++ + DI M D
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVD 108
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGD---CASLLKNTGPLPADMARFYFAETVLAVEY 479
PF VT Y + + + + ME ++ ++ +P D+ V A+E+
Sbjct: 109 CPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 168
Query: 480 LHS-YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
LHS ++HRD+KP N+LI ALG +K+ DFG+S + S+A + DA +
Sbjct: 169 LHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI-------DA----GCK 217
Query: 539 VYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF--FGETPEELFAHTVNDDI 596
Y PE I PE + ++GY D WS+G+ + E + P+ +G TP + V +
Sbjct: 218 PYMAPERINPE-LNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-TPFQQLKQVVEEPS 275
Query: 597 EWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
D + E + L++N ++R E+ +HP+F+
Sbjct: 276 PQLPADKF--SAEFVDFTSQCLKKNSKERPTY---PELMQHPFFT 315
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 58
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 114
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 165
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 280 A---ALAHPFFQDV 290
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 62
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 118
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------- 169
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 170 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 223
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 224 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 283
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 284 A---ALAHPFFQDV 294
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 58
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 114
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 165
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 280 A---ALAHPFFQDV 290
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 58
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 114
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------- 165
Query: 536 DKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 166 ------TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 280 A---ALAHPFFQDV 290
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 58
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 114
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 115 GLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------- 165
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 280 A---ALAHPFFQDV 290
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 59
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 115
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP+NLLI G IKL DFGL++ + + T +E
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 166
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 167 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 221 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 280
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 281 A---ALAHPFFQDV 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 57
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 113
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 164
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 165 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 278
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 279 A---ALAHPFFQDV 289
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 58
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 114
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 165
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 280 A---ALAHPFFQDV 290
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 29/263 (11%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY 430
++ G YG VY R + R A+K+I + + + A + + +V
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN---IVQYL 71
Query: 431 CSFETKKHLCLVMEYVEGGDCASLLKNT-GPLPAD--MARFYFAETVLAVEYLHSYGIVH 487
SF + + ME V GG ++LL++ GPL + FY + + ++YLH IVH
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 488 RDLKPDNLLI-TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYI 546
RD+K DN+LI T G +K++DFG SK + C + F+ GT +Y+
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKR-----LAGINPC-----TETFT-----GTLQYM 176
Query: 547 APEVILR--QGYGKPVDWWSMGVILYEFLVGCVPFF--GETPEELFAHTVNDDIEWPSED 602
APE+I + +GYGK D WS+G + E G PF+ GE +F + + E
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM---FKVHPEI 233
Query: 603 DWPIQVEAKSIITDLLQQNPRDR 625
+ EAK+ I + +P R
Sbjct: 234 PESMSAEAKAFILKCFEPDPDKR 256
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 60
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 116
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 167
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 168 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 222 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 281
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 282 A---ALAHPFFQDV 292
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 65
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 121
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------- 172
Query: 536 DKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 173 ------TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 226
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 227 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 286
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 287 A---ALAHPFFQDV 297
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 57
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 113
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------- 164
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 165 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 278
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 279 A---ALAHPFFQDV 289
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 57
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 113
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 164
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 165 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 278
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 279 A---ALAHPFFQDV 289
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 61
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 117
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 168
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 169 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 223 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 282
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 283 A---ALAHPFFQDV 293
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 60
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 116
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 167
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 168 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 222 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 281
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 282 A---ALAHPFFQDV 292
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 59
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 115
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 166
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 167 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 221 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 280
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 281 A---ALAHPFFQDV 291
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 59
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 115
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 166
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 167 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 221 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 280
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 281 A---ALAHPFFQDV 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 58
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 114
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------- 165
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 280 A---ALAHPFFQDV 290
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 57
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 113
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------- 164
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 165 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 278
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 279 A---ALAHPFFQDV 289
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 61
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 117
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 168
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 169 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 223 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 282
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 283 A---ALAHPFFQDV 293
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 58
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 114
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------- 165
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 280 A---ALAHPFFQDV 290
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 138/311 (44%), Gaps = 56/311 (18%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 61
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLAVE 478
++P +V + T+ L LV E++ D + + + +P + + Y + + +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
+ HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------------ 168
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----AHTV 592
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 169 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
Query: 593 NDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTGGPH 632
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA-- 283
Query: 633 EVKEHPYFSNL 643
HP+F ++
Sbjct: 284 -ALAHPFFQDV 293
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 60
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ + D ++L TG +P + + Y + +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASAL---TG-IPLPLIKSYLFQLLQ 116
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 167
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 168 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 221
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 222 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 281
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 282 A---ALAHPFFQDV 292
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 65
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 121
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------- 172
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 173 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 226
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 227 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 286
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 287 A---ALAHPFFQDV 297
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 59
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 115
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------- 166
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 167 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 220
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 221 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 280
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 281 A---ALAHPFFQDV 291
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 139/313 (44%), Gaps = 62/313 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 58
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 114
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 165
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 630 GPHEVKEHPYFSN 642
HP+F +
Sbjct: 280 A---ALAHPFFQD 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 62
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 118
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 169
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 170 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 223
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 224 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 283
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 284 A---ALAHPFFQDV 294
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+KKI L + E V E ++
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----RLDTETEGVPSTAIREISLLKE 61
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ + D ++L TG +P + + Y + +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASAL---TG-IPLPLIKSYLFQLLQ 117
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------- 168
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 169 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 223 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 282
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 283 A---ALAHPFFQDV 293
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 15/240 (6%)
Query: 357 FSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERD 416
K NE + ++ + G +VYL + A+K I +++ E
Sbjct: 5 IGKIINER-YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVH 63
Query: 417 IMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA 476
S + +V+M E LVMEY+EG + +++ GPL D A + + +
Sbjct: 64 NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDG 123
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+++ H IVHRD+KP N+LI + +K+ DFG++K L E + +
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKA--------LSETSLTQ------T 169
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDI 596
V GT +Y +PE + + D +S+G++LYE LVG PF GET + + D +
Sbjct: 170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV 229
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 27/234 (11%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
D+ V+ I G+YG +R K + K++ S M + + + +E +++ +P
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELKHP 65
Query: 425 FVVTMYCSF--ETKKHLCLVMEYVEGGDCASLL----KNTGPLPADMARFYFAETVLAVE 478
+V Y T L +VMEY EGGD AS++ K L + + LA++
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 479 YLH-----SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
H + ++HRDLKP N+ + ++KL DFGL++ +++ T+ + +V
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKAFV------ 177
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEEL 587
GTP Y++PE + R Y + D WS+G +LYE PF + +EL
Sbjct: 178 -------GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 27/234 (11%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
D+ V+ I G+YG +R K + K++ S M + + + +E +++ +P
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELKHP 65
Query: 425 FVVTMYCSF--ETKKHLCLVMEYVEGGDCASLL----KNTGPLPADMARFYFAETVLAVE 478
+V Y T L +VMEY EGGD AS++ K L + + LA++
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 479 YLH-----SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
H + ++HRDLKP N+ + ++KL DFGL++ +++ T+ + +V
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKTFV------ 177
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEEL 587
GTP Y++PE + R Y + D WS+G +LYE PF + +EL
Sbjct: 178 -------GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 27/234 (11%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
D+ V+ I G+YG +R K + K++ S M + + + +E +++ +P
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELKHP 65
Query: 425 FVVTMYCSF--ETKKHLCLVMEYVEGGDCASLL----KNTGPLPADMARFYFAETVLAVE 478
+V Y T L +VMEY EGGD AS++ K L + + LA++
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 479 YLH-----SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
H + ++HRDLKP N+ + ++KL DFGL+++ N E + AK+
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI------LNHDEDF----AKE 175
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEEL 587
F GTP Y++PE + R Y + D WS+G +LYE PF + +EL
Sbjct: 176 FV-----GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 135/284 (47%), Gaps = 30/284 (10%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI---------IKNSLMLRNQMEQVFAE 414
+DF I ++ GA+G V R+ + +A+KKI I + +ML + +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL--KNTGPLPADMARFYFAE 472
R ++ + V + + K L + MEY E G L+ +N + R F +
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL-FRQ 124
Query: 473 TVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
+ A+ Y+HS GI+HRDLKP N+ I ++K+ DFGL+K SL ++ D++
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI------LKLDSQ 178
Query: 533 QF---SDK--QVYGTPEYIAPEVILRQG-YGKPVDWWSMGVILYEFLVGCVPF-FGETPE 585
SD GT Y+A EV+ G Y + +D +S+G+I +E + PF G
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERV 235
Query: 586 ELFAHTVNDDIEWPSE-DDWPIQVEAKSIITDLLQQNPRDRLGT 628
+ + IE+P + DD ++VE K II L+ +P R G
Sbjct: 236 NILKKLRSVSIEFPPDFDDNKMKVE-KKIIRLLIDHDPNKRPGA 278
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 142/306 (46%), Gaps = 53/306 (17%)
Query: 369 IKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI--MSFTDNPFV 426
I I G+YG V+ R+++T Q A+KK +++ + + + A R+I + +P +
Sbjct: 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE---DDPVIKKIALREIRMLKQLKHPNL 64
Query: 427 VTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIV 486
V + F K+ L LV EY + L + +P + + +T+ AV + H + +
Sbjct: 65 VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCI 124
Query: 487 HRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYI 546
HRD+KP+N+LIT IKL DFG ++ L++ ++ Y D +V T Y
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFAR--LLTGPSDYY------------DDEV-ATRWYR 169
Query: 547 APEVILRQG-YGKPVDWWSMGVILYEFLVGCVPFFGETPEE---LFAHTVND-------- 594
+PE+++ YG PVD W++G + E L G + G++ + L T+ D
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQV 229
Query: 595 ----------------DIEWPSEDDWP-IQVEAKSIITDLLQQNPRDRLGTGGPHEVKEH 637
D+E P E +P I A ++ L +P +RL ++ H
Sbjct: 230 FSTNQYFSGVKIPDPEDME-PLELKFPNISYPALGLLKGCLHMDPTERLTC---EQLLHH 285
Query: 638 PYFSNL 643
PYF N+
Sbjct: 286 PYFENI 291
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 133/293 (45%), Gaps = 44/293 (15%)
Query: 364 NDFTVI-KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+D+ V +++ G G V + +K T+++FA+K + ++ R ++E + +
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXL-QDCPKARREVELHWRA------SQ 113
Query: 423 NPFVVTMYCSFET----KKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLA 476
P +V + +E +K L +V E ++GG+ S +++ G A A
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEA 173
Query: 477 VEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSK--MGLMSLATNLYECYVERDA 531
++YLHS I HRD+KP+NLL T+ +KLTDFG +K SL T CY
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT---PCY----- 225
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF--- 588
TP Y+APEV+ + Y K D WS+GVI Y L G PF+ +
Sbjct: 226 ----------TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGX 275
Query: 589 -AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
E+P+ + + E K +I +LL+ P R E HP+
Sbjct: 276 KTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTIT---EFXNHPWI 325
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 18/222 (8%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIM 418
P D+ +++ + GA G V L ++ T + A+K + +K ++ + E + E I
Sbjct: 2 VPFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICIN 58
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
++ VV Y L +EY GG+ ++ +P A+ +F + + V
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
YLH GI HRD+KP+NLL+ ++K++DFGL+ + + + ++ +K
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATV------------FRYNNRERLLNKM 166
Query: 539 VYGTPEYIAPEVILRQGY-GKPVDWWSMGVILYEFLVGCVPF 579
GT Y+APE++ R+ + +PVD WS G++L L G +P+
Sbjct: 167 C-GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 25/226 (11%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME-------QVFAER 415
E ++ + L+ G +G+V+ R + A+K I +N ++ + + +V
Sbjct: 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLW 89
Query: 416 DIMSFTDNPFVVTMYCSFETKKHLCLVMEY-VEGGDCASLLKNTGPLPADMARFYFAETV 474
+ + +P V+ + FET++ LV+E + D + GPL +R +F + V
Sbjct: 90 KVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVV 149
Query: 475 LAVEYLHSYGIVHRDLKPDNLLI-TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
A+++ HS G+VHRD+K +N+LI G KL DFG S A E Y +
Sbjct: 150 AAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG-------SGALLHDEPYTD----- 197
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
F +VY PE+I+ Q + P WS+G++LY+ + G +PF
Sbjct: 198 FDGTRVYSPPEWIS----RHQYHALPATVWSLGILLYDMVCGDIPF 239
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+ KI L + E V E ++
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI-----RLDTETEGVPSTAIREISLLKE 58
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 114
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------- 165
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 280 A---ALAHPFFQDV 290
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 62/314 (19%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSF 420
+F ++ I G YG VY R+K T + A+ KI L + E V E ++
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI-----RLDTETEGVPSTAIREISLLKE 57
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVL 475
++P +V + T+ L LV E++ D ++L TG +P + + Y + +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL---TG-IPLPLIKSYLFQLLQ 113
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ + HS+ ++HRDLKP NLLI G IKL DFGL++ + + T +E
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------- 164
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----A 589
T Y APE++L + Y VD WS+G I E + F G++ ++LF
Sbjct: 165 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218
Query: 590 HTVNDDIEW----------PSEDDW----------PIQVEAKSIITDLLQQNPRDRLGTG 629
D++ W PS W P+ + +S+++ +L +P R+
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 278
Query: 630 GPHEVKEHPYFSNL 643
HP+F ++
Sbjct: 279 A---ALAHPFFQDV 289
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS-FTDNP 424
F +++L+ NG YG VY RH +T Q A+K + + ++ E++ E +++ ++ +
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHR 81
Query: 425 FVVTMYCSFETKK------HLCLVMEYVEGGDCASLLKNT--GPLPADMARFYFAETVLA 476
+ T Y +F K L LVME+ G L+KNT L + + E +
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ +LH + ++HRD+K N+L+T +KL DFG+S + D
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS---------------AQLDRTVGRR 186
Query: 537 KQVYGTPEYIAPEVIL-----RQGYGKPVDWWSMGVILYEFLVGCVPF 579
GTP ++APEVI Y D WS+G+ E G P
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI-MSFTD 422
+D I + GAYG V +RH + Q A+K+I + + + +++ + DI M D
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVD 64
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGD---CASLLKNTGPLPADMARFYFAETVLAVEY 479
PF VT Y + + + + ME ++ ++ +P D+ V A+E+
Sbjct: 65 CPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 124
Query: 480 LHS-YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
LHS ++HRD+KP N+LI ALG +K+ DFG+S + +A ++ DA +
Sbjct: 125 LHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI-------DA----GCK 173
Query: 539 VYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF--FGETPEELFAHTVNDDI 596
Y PE I PE + ++GY D WS+G+ + E + P+ +G TP + V +
Sbjct: 174 PYMAPERINPE-LNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-TPFQQLKQVVEEPS 231
Query: 597 EWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPH--EVKEHPYFS 641
D + E + L++N ++R P E+ +HP+F+
Sbjct: 232 PQLPADKF--SAEFVDFTSQCLKKNSKER-----PTYPELMQHPFFT 271
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 40/298 (13%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM-SFTDNPFVVT 428
+L+ GAY V + + +A+K I K + R++ VF E + + N ++
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSR---VFREVETLYQCQGNKNILE 75
Query: 429 MYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
+ FE LV E ++GG + ++ A + A+++LH+ GI HR
Sbjct: 76 LIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHR 135
Query: 489 DLKPDNLLITA---LGHIKLTDFGL-SKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
DLKP+N+L + + +K+ DF L S M L + T + + G+ E
Sbjct: 136 DLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC---------GSAE 186
Query: 545 YIAPEVI-----LRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEE------------- 586
Y+APEV+ Y K D WS+GV+LY L G PF G +
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQ 246
Query: 587 --LFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
LF E+P +D I EAK +I+ LL ++ + RL +V +HP+
Sbjct: 247 NKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAA---QVLQHPWVQG 301
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 112/220 (50%), Gaps = 24/220 (10%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI------IKNSLMLRNQMEQV--FAER 415
+++ +I+ I NGAYG V R + T Q+ A+KKI + N+ +++ + F
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 416 DIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
+I++ D Y F K + +V++ +E D ++ ++ PL + R++ + +
Sbjct: 115 NIIAIKDILRPTVPYGEF---KSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLR 170
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
++Y+HS ++HRDLKP NLL+ +K+ DFG+++ L T+ E Q+
Sbjct: 171 GLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR----GLCTSPAE-------HQYF 219
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLV 574
+ T Y APE++L Y + +D WS+G I E L
Sbjct: 220 MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 29/214 (13%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
+ G++G V+ ++ K+T + A+KK+ ++E++ A + S P +V +Y
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSS----PRIVPLYG 117
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLK 491
+ + + ME +EGG L+K G LP D A +Y + + +EYLH+ I+H D+K
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 492 PDNLLITALG-HIKLTDFG----LSKMGL-MSLATNLYECYVERDAKQFSDKQVYGTPEY 545
DN+L+++ G L DFG L GL SL T Y + GT +
Sbjct: 178 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY---------------IPGTETH 222
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
+APEV++ + VD WS ++ L GC P+
Sbjct: 223 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 33/216 (15%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD--NPFVVTM 429
+ G++G V+ ++ K+T + A+KK+ ++E VF ++++ +P +V +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV---------RLE-VFRVEELVACAGLSSPRIVPL 131
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRD 489
Y + + + ME +EGG L+K G LP D A +Y + + +EYLH+ I+H D
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 191
Query: 490 LKPDNLLITALG-HIKLTDFG----LSKMGL-MSLATNLYECYVERDAKQFSDKQVYGTP 543
+K DN+L+++ G L DFG L GL SL T Y + GT
Sbjct: 192 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY---------------IPGTE 236
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
++APEV++ + VD WS ++ L GC P+
Sbjct: 237 THMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 112/219 (51%), Gaps = 24/219 (10%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI------IKNSLMLRNQMEQV--FAER 415
+++ +I+ I NGAYG V R + T Q+ A+KKI + N+ +++ + F
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 416 DIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
+I++ D Y F K + +V++ +E D ++ ++ PL + R++ + +
Sbjct: 114 NIIAIKDILRPTVPYGEF---KSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLR 169
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
++Y+HS ++HRDLKP NLL+ +K+ DFG+++ L T+ E Q+
Sbjct: 170 GLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR----GLCTSPAE-------HQYF 218
Query: 536 DKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFL 573
+ T Y APE++L Y + +D WS+G I E L
Sbjct: 219 MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 257
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 120/244 (49%), Gaps = 27/244 (11%)
Query: 369 IKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQ-----VFAERDIMSFTDN 423
+ + G + +VY R K T Q A+KKI L R++ + E ++ +
Sbjct: 15 LDFLGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK-NTGPLPADMARFYFAETVLAVEYLHS 482
P ++ + +F K ++ LV +++E D ++K N+ L + Y T+ +EYLH
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
+ I+HRDLKP+NLL+ G +KL DFGL+K S + + + + V T
Sbjct: 131 HWILHRDLKPNNLLLDENGVLKLADFGLAK----SFGS---------PNRAYXHQVV--T 175
Query: 543 PEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSE 601
Y APE++ + YG VD W++G IL E L+ VPF + + + + P+E
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELLLR-VPFLPGDSDLDQLTRIFETLGTPTE 234
Query: 602 DDWP 605
+ WP
Sbjct: 235 EQWP 238
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 29/214 (13%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
+ G++G V+ ++ K+T + A+KK+ ++E++ A + S P +V +Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSS----PRIVPLYG 131
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLK 491
+ + + ME +EGG L+K G LP D A +Y + + +EYLH+ I+H D+K
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 492 PDNLLITALG-HIKLTDFG----LSKMGL-MSLATNLYECYVERDAKQFSDKQVYGTPEY 545
DN+L+++ G L DFG L GL SL T Y + GT +
Sbjct: 192 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY---------------IPGTETH 236
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
+APEV++ + VD WS ++ L GC P+
Sbjct: 237 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 133/313 (42%), Gaps = 63/313 (20%)
Query: 367 TVIKL--ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQ-----VFAERDIMS 419
T IKL + G Y +VY + K T A+K+I R + E+ E ++
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI-------RLEHEEGAPCTAIREVSLLK 55
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPL-PADMARFYFAETVLAVE 478
+ +VT++ T+K L LV EY++ D L + G + + + + + +
Sbjct: 56 DLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLA 114
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y H ++HRDLKP NLLI G +KL DFGL++ S+ T Y D +
Sbjct: 115 YCHRQKVLHRDLKPQNLLINERGELKLADFGLARA--KSIPTKTY------------DNE 160
Query: 539 VYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y P+++L Y +D W +G I YE G F G T EE H + +
Sbjct: 161 VV-TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL-HFIFRILG 218
Query: 598 WPSEDDWP---------------------------IQVEAKSIITDLLQQNPRDRLGTGG 630
P+E+ WP + + ++T LLQ R+R+
Sbjct: 219 TPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISA-- 276
Query: 631 PHEVKEHPYFSNL 643
+ +HP+F +L
Sbjct: 277 -EDAMKHPFFLSL 288
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 116/242 (47%), Gaps = 38/242 (15%)
Query: 356 KFSKTPNEN-DFTVIKL-----ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME 409
K +P ++ DFT L I GAYGSV + HK + Q A+K+I S + + +
Sbjct: 8 KLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQK 65
Query: 410 QVFAERDI-MSFTDNPFVVTMYCSFETKKHLCLVMEYVEGG------DCASLLKNTGPLP 462
Q+ + D+ M +D P++V Y + + + ME + S+L + +P
Sbjct: 66 QLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDV--IP 123
Query: 463 ADMARFYFAETVLAVEYL-HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATN 521
++ TV A+ +L + I+HRD+KP N+L+ G+IKL DFG+S + S+A
Sbjct: 124 EEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKT 183
Query: 522 LYECYVERDAKQFSDKQVYGTPEYIAPEVI----LRQGYGKPVDWWSMGVILYEFLVGCV 577
RDA G Y+APE I RQGY D WS+G+ LYE G
Sbjct: 184 -------RDA---------GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRF 227
Query: 578 PF 579
P+
Sbjct: 228 PY 229
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 24/273 (8%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
F ++ + NG Y +VY +K T A+K++ +S E +M +
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--EGTPSTAIREISLMKELKHEN 64
Query: 426 VVTMYCSFETKKHLCLVMEYVEGG-----DCASLLKNTGPLPADMARFYFAETVLAVEYL 480
+V +Y T+ L LV E+++ D ++ L ++ +++ + + + +
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
H I+HRDLKP NLLI G +KL DFGL++ + + T FS + V
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT-------------FSSEVV- 170
Query: 541 GTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
T Y AP+V++ + Y +D WS G IL E + G P F T +E + D + P
Sbjct: 171 -TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK-PLFPGTNDEEQLKLIFDIMGTP 228
Query: 600 SEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPH 632
+E WP + ++ Q+ PRD PH
Sbjct: 229 NESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPH 261
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 30/284 (10%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI---------IKNSLMLRNQMEQVFAE 414
+DF I ++ GA+G V R+ + +A+KKI I + +ML + +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL--KNTGPLPADMARFYFAE 472
R ++ + V + + K L + MEY E L+ +N + R F +
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL-FRQ 124
Query: 473 TVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
+ A+ Y+HS GI+HRDLKP N+ I ++K+ DFGL+K SL ++ D++
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI------LKLDSQ 178
Query: 533 QF---SDK--QVYGTPEYIAPEVILRQG-YGKPVDWWSMGVILYEFLVGCVPF-FGETPE 585
SD GT Y+A EV+ G Y + +D +S+G+I +E + PF G
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERV 235
Query: 586 ELFAHTVNDDIEWPSE-DDWPIQVEAKSIITDLLQQNPRDRLGT 628
+ + IE+P + DD ++VE K II L+ +P R G
Sbjct: 236 NILKKLRSVSIEFPPDFDDNKMKVE-KKIIRLLIDHDPNKRPGA 278
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 128/273 (46%), Gaps = 37/273 (13%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS----- 419
DF I+LI +G +G V+ +H+ + + +K++ N+ ++ + A+ D ++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREV-KALAKLDHVNIVHYN 70
Query: 420 -----FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTG-PLPADMARFYFAE 472
F +P + S K L + ME+ + G + K G L +A F +
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 473 TVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
V+Y+HS +++RDLKP N+ + +K+ DFG L T+L + D K
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFG--------LVTSL-----KNDGK 177
Query: 533 QFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTV 592
+ K GT Y++PE I Q YGK VD +++G+IL E L C F ET + F +
Sbjct: 178 RXRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF-ETSK--FFTDL 231
Query: 593 NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
D I D + K+++ LL + P DR
Sbjct: 232 RDGIISDIFDK-----KEKTLLQKLLSKKPEDR 259
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 128/300 (42%), Gaps = 47/300 (15%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
+ G YG VY + K+++ R K I+ E ++ +P +V++
Sbjct: 29 VGEGTYGVVY--KAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLK 491
+++ L LV E++E L +N L + Y + + V + H + I+HRDLK
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 492 PDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI 551
P NLLI + G +KL DFGL++ + + + +E T Y AP+V+
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV---------------TLWYRAPDVL 191
Query: 552 L-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN-----DDIEWPSEDDWP 605
+ + Y VD WS+G I E + G F G T ++ + + EWP + P
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251
Query: 606 I------QV---------------EAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ QV E +++++L +P R+ + HPYF +LD
Sbjct: 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISA---RDAMNHPYFKDLD 308
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 91
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 92 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 199
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 200 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 250
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 251 GGQVFFRQR--------VSXECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 294
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 91
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 92 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 199
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 200 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 250
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 251 GGQVFFRQR--------VSXECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 294
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 130/295 (44%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 3 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 62
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E +E D + G L ++AR +
Sbjct: 63 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSF 119
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 170
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 171 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 221
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 222 RGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 265
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI---IKNSLMLRNQME----QVFAERD 416
+DF + L+ GAYG V HK T + A+KKI K LR E + F +
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 417 IMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA 476
I++ F + SFE + ++ E ++ D ++ +T L D +++ +T+ A
Sbjct: 71 IITI----FNIQRPDSFENFNEVYIIQELMQT-DLHRVI-STQMLSDDHIQYFIYQTLRA 124
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
V+ LH ++HRDLKP NLLI + +K+ DFGL+++ S A N E +Q
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN-----SEPTGQQSGM 179
Query: 537 KQVYGTPEYIAPEVILRQG-YGKPVDWWSMGVILYEFLV 574
+ T Y APEV+L Y + +D WS G IL E +
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL 218
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 21/221 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI-MSFTD 422
ND + + +G G V+ +R ++T A+K++ ++ N+ ++ + D+ + D
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENK--RILMDLDVVLKSHD 82
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKN--TGPLPADMARFYFAETVLAVEYL 480
P++V + +F T + + ME + G CA LK GP+P + V A+ YL
Sbjct: 83 CPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYL 140
Query: 481 -HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK-Q 538
+G++HRD+KP N+L+ G IKL DFG+S V+ AK S
Sbjct: 141 KEKHGVIHRDVKPSNILLDERGQIKLCDFGISGR------------LVDDKAKDRSAGCA 188
Query: 539 VYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
Y PE I P + Y D WS+G+ L E G P+
Sbjct: 189 AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY 229
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 128/300 (42%), Gaps = 47/300 (15%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
+ G YG VY + K+++ R K I+ E ++ +P +V++
Sbjct: 29 VGEGTYGVVY--KAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 432 SFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLK 491
+++ L LV E++E L +N L + Y + + V + H + I+HRDLK
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 492 PDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI 551
P NLLI + G +KL DFGL++ + + + +E T Y AP+V+
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV---------------TLWYRAPDVL 191
Query: 552 L-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN-----DDIEWPSEDDWP 605
+ + Y VD WS+G I E + G F G T ++ + + EWP + P
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251
Query: 606 I------QV---------------EAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ QV E +++++L +P R+ + HPYF +LD
Sbjct: 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISA---RDAMNHPYFKDLD 308
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 90
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 91 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 198
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 199 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 249
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 250 GGQVFFRQR--------VSXECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 293
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 91
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 92 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 199
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 200 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 250
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 251 GGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 294
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 91
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 92 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 199
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 200 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 250
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 251 GGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 294
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI---IKNSLMLRNQME----QVFAERD 416
+DF + L+ GAYG V HK T + A+KKI K LR E + F +
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 417 IMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA 476
I++ F + SFE + ++ E ++ D ++ +T L D +++ +T+ A
Sbjct: 71 IITI----FNIQRPDSFENFNEVYIIQELMQT-DLHRVI-STQMLSDDHIQYFIYQTLRA 124
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
V+ LH ++HRDLKP NLLI + +K+ DFGL+++ S A N E +Q
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN-----SEPTGQQSGM 179
Query: 537 KQVYGTPEYIAPEVILRQG-YGKPVDWWSMGVILYEFLV 574
+ T Y APEV+L Y + +D WS G IL E +
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL 218
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 90
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 91 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 198
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 199 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 249
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 250 GGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 293
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 90
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 91 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 198
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 199 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 249
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 250 GGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 293
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI---IKNSLMLRNQME----QVFAERD 416
+DF + L+ GAYG V HK T + A+KKI K LR E + F +
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 417 IMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA 476
I++ F + SFE + ++ E ++ D ++ +T L D +++ +T+ A
Sbjct: 71 IITI----FNIQRPDSFENFNEVYIIQELMQT-DLHRVI-STQMLSDDHIQYFIYQTLRA 124
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
V+ LH ++HRDLKP NLLI + +K+ DFGL+++ S A N E +Q
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN-----SEPTGQQSGM 179
Query: 537 KQVYGTPEYIAPEVILRQG-YGKPVDWWSMGVILYEFLV 574
+ T Y APEV+L Y + +D WS G IL E +
Sbjct: 180 VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL 218
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 18 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 77
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 78 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 185
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 186 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 236
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 237 RGQVFFRQR--------VSXECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 280
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 78
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 79 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 186
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 187 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 237
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 238 RGQVFFRQR--------VSXECQHLIRWCLALRPXDRPTF---EEIQNHPWMQDV 281
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 78
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 79 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 186
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 187 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 237
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 238 RGQVFFRQR--------VSXECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 281
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 90
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 91 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 198
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 199 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 249
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 250 RGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 293
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 18 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 77
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 78 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 185
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 186 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 236
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 237 RGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 280
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 51 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 110
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 111 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 167
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 218
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 219 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 269
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 270 RGQVFFRQR--------VSXECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 313
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 78
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 79 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 186
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 187 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 237
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 238 RGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 281
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 46 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 105
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 106 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 213
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 214 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 264
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 265 RGQVFFRQR--------VSXECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 308
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 63
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 64 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 171
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 172 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 222
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 223 RGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 266
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 97
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 98 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 205
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 206 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 256
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 257 RGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 300
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 63
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 64 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 171
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 172 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 222
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 223 RGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 266
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 3 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 62
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 63 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 119
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 170
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 171 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 221
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 222 RGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 265
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 63
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 64 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 171
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 172 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 222
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 223 RGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 266
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 39/261 (14%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKII-------------KNSLMLRNQMEQVF 412
+T ++ I GAYG V + R A+KKI + ++LR + E V
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 413 AERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAE 472
RDI+ + + E + + +V + +E D LLK+ L D ++ +
Sbjct: 105 GIRDILRAS----------TLEAMRDVYIVQDLMET-DLYKLLKSQQ-LSNDHICYFLYQ 152
Query: 473 TVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
+ ++Y+HS ++HRDLKP NLLI +K+ DFGL+++ E D
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIA-----------DPEHDHT 201
Query: 533 QFSDKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
F + V T Y APE++L +GY K +D WS+G IL E L F G+ + H
Sbjct: 202 GFLTEXV-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
Query: 592 VNDDIEWPSEDDWPIQVEAKS 612
+ + PS++D + K+
Sbjct: 261 LG-ILGSPSQEDLNCIINMKA 280
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 135/288 (46%), Gaps = 38/288 (13%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+DF I ++ GA+G V R+ + +A+KKI ++ + +E +++ ++
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVXLLASLNH 61
Query: 424 PFVVTMYCSF-------------ETKKHLCLVMEYVEGGDCASLL--KNTGPLPADMARF 468
+VV Y ++ + K L + EY E L+ +N + R
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + A+ Y+HS GI+HR+LKP N+ I ++K+ DFGL+K SL ++
Sbjct: 122 -FRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDI------LK 174
Query: 529 RDAKQF---SDK--QVYGTPEYIAPEVILRQG-YGKPVDWWSMGVILYEFLVGCVPF-FG 581
D++ SD GT Y+A EV+ G Y + +D +S+G+I +E + PF G
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTG 231
Query: 582 ETPEELFAHTVNDDIEWPSE-DDWPIQVEAKSIITDLLQQNPRDRLGT 628
+ + IE+P + DD +VE K II L+ +P R G
Sbjct: 232 XERVNILKKLRSVSIEFPPDFDDNKXKVE-KKIIRLLIDHDPNKRPGA 278
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 42/248 (16%)
Query: 352 SKKDK--FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
SK+D +S ++ FTV+K I +GA G V + A+KK+ S
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKL---SRP 60
Query: 404 LRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLL 455
+NQ ++ + E +M ++ ++ + F +K L +VME ++ L
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----L 115
Query: 456 KNTGPLPADMAR--FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKM 513
+ D R + + ++ +++LHS GI+HRDLKP N+++ + +K+ DFGL++
Sbjct: 116 SQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 514 GLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFL 573
S Y T Y APEVIL GY + VD WS+GVI+ E +
Sbjct: 176 AGTSFMMTPYVV----------------TRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
Query: 574 VGCVPFFG 581
G V F G
Sbjct: 220 KGGVLFPG 227
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 26 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 85
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 86 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 142
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 143 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 193
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 194 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 244
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 245 RGQVFFRQR--------VSXECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 288
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 46 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 105
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 106 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 213
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 214 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 264
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 265 RGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 308
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 42/295 (14%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQ 410
K P E+ + V L+ +G +GSVY A+K + K+ + R ME
Sbjct: 2 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 61
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFY 469
V ++ F+ V+ + FE L++E E D + G L ++AR +
Sbjct: 62 VLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 118
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 119 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY----- 169
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 170 ---TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 220
Query: 589 AHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 221 RGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 264
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 42/248 (16%)
Query: 352 SKKDK--FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
SK+D +S ++ FTV+K I +GA G V + A+KK+ S
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL---SRP 60
Query: 404 LRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLL 455
+NQ ++ + E +M ++ ++ + F +K L +VME ++ L
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----L 115
Query: 456 KNTGPLPADMAR--FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKM 513
+ D R + + ++ +++LHS GI+HRDLKP N+++ + +K+ DFGL++
Sbjct: 116 SQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 514 GLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFL 573
S Y T Y APEVIL GY + VD WS+GVI+ E +
Sbjct: 176 AGTSFMMTPYVV----------------TRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
Query: 574 VGCVPFFG 581
G V F G
Sbjct: 220 KGGVLFPG 227
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 129/299 (43%), Gaps = 44/299 (14%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM-SFTDNPFVVTM 429
++ GA+ V + T Q +A+K I K +R++ VF E +++ + V+ +
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR---VFREVEMLYQCQGHRNVLEL 76
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRD 489
FE + LV E + GG S + A + A+++LH+ GI HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 490 LKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY---GTP 543
LKP+N+L + +K+ DFGL G+ + D S ++ G+
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGS-GIK----------LNGDCSPISTPELLTPCGSA 185
Query: 544 EYIAPEVILRQG-----YGKPVDWWSMGVILYEFLVGCVPFFGETPEE------------ 586
EY+APEV+ Y K D WS+GVILY L G PF G +
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245
Query: 587 ---LFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
LF E+P +D I AK +I+ LL ++ + RL +V +HP+
Sbjct: 246 QNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAA---QVLQHPWVQG 301
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 33/267 (12%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMK-----KIIKNSLMLRNQMEQVFAERDIMSF 420
++ + + +GA+G V+ KE + +K K++++ + ++ +V E I+S
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 421 TDNPFVVTMYCSFETKKHLCLVME-YVEGGDCASLLKNTGPLPADMARFYFAETVLAVEY 479
++ ++ + FE + LVME + G D + + L +A + F + V AV Y
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
L I+HRD+K +N++I IKL DFG + Y+ER ++
Sbjct: 146 LRLKDIIHRDIKDENIVIAEDFTIKLIDFGSA-------------AYLERGKLFYT---F 189
Query: 540 YGTPEYIAPEVILRQGYGKP-VDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEW 598
GT EY APEV++ Y P ++ WS+GV LY + F E P TV I
Sbjct: 190 CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV------FEENPFCELEETVEAAIHP 243
Query: 599 PSEDDWPIQVEAKSIITDLLQQNPRDR 625
P + + E S+++ LLQ P R
Sbjct: 244 P----YLVSKELMSLVSGLLQPVPERR 266
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 131/285 (45%), Gaps = 27/285 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT-D 422
+D I + GAYG V RH + Q A+K+I + + + +++ + DI T D
Sbjct: 34 DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRI--RATVNSQEQKRLLXDLDISXRTVD 91
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGD---CASLLKNTGPLPADMARFYFAETVLAVEY 479
PF VT Y + + + + E + ++ +P D+ V A+E+
Sbjct: 92 CPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 151
Query: 480 LHS-YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
LHS ++HRD+KP N+LI ALG +K DFG+S + +A ++ DA +
Sbjct: 152 LHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDI-------DA----GCK 200
Query: 539 VYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF--FGETPEELFAHTVNDDI 596
Y PE I PE + ++GY D WS+G+ E + P+ +G TP + V +
Sbjct: 201 PYXAPERINPE-LNQKGYSVKSDIWSLGITXIELAILRFPYDSWG-TPFQQLKQVVEEPS 258
Query: 597 EWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFS 641
D + E + L++N ++R E+ +HP+F+
Sbjct: 259 PQLPADKF--SAEFVDFTSQCLKKNSKERPTY---PELXQHPFFT 298
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 42/238 (17%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +++ IM
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRK 103
Query: 421 TDNPFVVTM----YCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFY 469
D+ +V + Y S E K +L LV++YV S K T LP + Y
Sbjct: 104 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLY 161
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECY 526
+ ++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + Y C
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYIC- 218
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 219 ---------------SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 42/238 (17%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +++ IM
Sbjct: 55 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRK 107
Query: 421 TDNPFVVTM----YCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFY 469
D+ +V + Y S E K +L LV++YV S K T LP + Y
Sbjct: 108 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLY 165
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECY 526
+ ++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + Y C
Sbjct: 166 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYIC- 222
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 223 ---------------SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 265
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 42/238 (17%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +++ IM
Sbjct: 53 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRK 105
Query: 421 TDNPFVVTM----YCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFY 469
D+ +V + Y S E K +L LV++YV S K T LP + Y
Sbjct: 106 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLY 163
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECY 526
+ ++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + Y C
Sbjct: 164 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYIC- 220
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 221 ---------------SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 263
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + LV ++ G D LLK T L D ++ + + ++
Sbjct: 105 GIND----IIRAPTIEQMKDVYLV-THLMGADLYKLLK-TQHLSNDHICYFLYQILRGLK 158
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 159 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA-----------DPDHDHTGFLTEY 207
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 208 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 265
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 266 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 298
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 42/293 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQVF 412
P E+ + V L+ +G +GSVY A+K + K+ + R ME V
Sbjct: 1 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL 60
Query: 413 AERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFYFA 471
++ F+ V+ + FE L++E E D + G L ++AR +F
Sbjct: 61 LKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
+ + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY------- 166
Query: 531 AKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAH 590
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 167 -TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIGG 219
Query: 591 TVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 220 QVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 261
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 42/238 (17%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +++ IM
Sbjct: 45 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRK 97
Query: 421 TDNPFVVTM----YCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFY 469
D+ +V + Y S E K +L LV++YV S K T LP + Y
Sbjct: 98 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLY 155
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECY 526
+ ++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + Y C
Sbjct: 156 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYIC- 212
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 213 ---------------SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 255
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 42/293 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQVF 412
P E+ + V L+ +G +GSVY A+K + K+ + R ME V
Sbjct: 1 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL 60
Query: 413 AERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFYFA 471
++ F+ V+ + FE L++E E D + G L ++AR +F
Sbjct: 61 LKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
+ + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY------- 166
Query: 531 AKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAH 590
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 167 -TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIRG 219
Query: 591 TVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 220 QVFFRQR--------VSXECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 261
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 42/238 (17%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +++ IM
Sbjct: 96 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRK 148
Query: 421 TDNPFVVTM----YCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFY 469
D+ +V + Y S E K +L LV++YV S K T LP + Y
Sbjct: 149 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLY 206
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECY 526
+ ++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + Y C
Sbjct: 207 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYIC- 263
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 264 ---------------SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 306
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 129/286 (45%), Gaps = 50/286 (17%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF---- 420
DF I+LI +G +G V+ +H+ + + ++++ N+ ++ + A+ D ++
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREV-KALAKLDHVNIVHYN 71
Query: 421 ------------TDNPFVVTMY-------CSFETKKHLCLVMEYVEGGDCASLL-KNTG- 459
+D+ + Y S K L + ME+ + G + K G
Sbjct: 72 GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 460 PLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLA 519
L +A F + V+Y+HS ++HRDLKP N+ + +K+ DFG L
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFG--------LV 183
Query: 520 TNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
T+L + D K+ K GT Y++PE I Q YGK VD +++G+IL E L C
Sbjct: 184 TSL-----KNDGKRTRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA 235
Query: 580 FGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
F ET + F + D I D + K+++ LL + P DR
Sbjct: 236 F-ETSK--FFTDLRDGIISDIFDK-----KEKTLLQKLLSKKPEDR 273
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 38/271 (14%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+ F + + +G+YG V+ VR KE + +A+K+ + +++ ++
Sbjct: 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ 115
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKN-----TGPLPADMARFYFAETVLAV 477
+P V + ++E L L E C L+ LP Y +T+LA+
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTEL-----CGPSLQQHCEAWGASLPEAQVWGYLRDTLLAL 170
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
+LHS G+VH D+KP N+ + G KL DFGL L+ L T A + +
Sbjct: 171 AHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL----LVELGTA--------GAGEVQE- 217
Query: 538 QVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGC---VPFFGETPEELFAHTVND 594
G P Y+APE +L+ YG D +S+G+ + E V C +P GE ++L +
Sbjct: 218 ---GDPRYMAPE-LLQGSYGTAADVFSLGLTILE--VACNMELPHGGEGWQQLRQGYL-- 269
Query: 595 DIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
P E + E +S++ +L+ +P+ R
Sbjct: 270 ----PPEFTAGLSSELRSVLVMMLEPDPKLR 296
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 30/278 (10%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLR-NQMEQVFAERDIMSFTDNPFVVTM 429
L+ G+YG V V ET R A+K + K L N V E ++ + V+ +
Sbjct: 12 LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 430 YCSF--ETKKHLCLVMEYVEGGDCASLLKNTGP---LPADMARFYFAETVLAVEYLHSYG 484
E K+ + +VMEY G L ++ P P A YF + + +EYLHS G
Sbjct: 72 VDVLYNEEKQKMYMVMEYCVCGMQEML--DSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG 129
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
IVH+D+KP NLL+T G +K++ G+++ L A + D + S G+P
Sbjct: 130 IVHKDIKPGNLLLTTGGTLKISALGVAE-ALHPFAAD--------DTCRTSQ----GSPA 176
Query: 545 YIAPEVI--LRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSED 602
+ PE+ L G VD WS GV LY G PF G+ +LF + P +
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDC 236
Query: 603 DWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
P+ ++ +L+ P R ++++H +F
Sbjct: 237 GPPLS----DLLKGMLEYEPAKRFSI---RQIRQHSWF 267
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 34/234 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +N+ Q+ + D +
Sbjct: 30 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDHCNI 88
Query: 421 TDNPFVVTMYCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAET 473
+ Y S E K +L LV++YV S K T LP + Y +
Sbjct: 89 VRLRYF--FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLYMYQL 144
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + Y C
Sbjct: 145 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYIC----- 197
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 198 -----------SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 240
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 112/272 (41%), Gaps = 24/272 (8%)
Query: 357 FSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERD 416
F K E F+ ++ I +G++G+VY R + A+KK+ + + + + E
Sbjct: 8 FFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR 67
Query: 417 IMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA 476
+ +P + + + LVMEY G L + PL +
Sbjct: 68 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQG 127
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ YLHS+ ++HRD+K N+L++ G +KL DFG + +M+ A
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA--SIMAPANXF-------------- 171
Query: 537 KQVYGTPEYIAPEVILRQGYGK---PVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN 593
GTP ++APEVIL G+ VD WS+G+ E P F H
Sbjct: 172 ---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
++ W ++ + LQ+ P+DR
Sbjct: 229 NESPALQSGHWSEYF--RNFVDSCLQKIPQDR 258
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 34/234 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +N+ Q+ + D +
Sbjct: 22 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDHCNI 80
Query: 421 TDNPFVVTMYCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAET 473
+ Y S E K +L LV++YV S K T LP + Y +
Sbjct: 81 VRLRYF--FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLYMYQL 136
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + Y C
Sbjct: 137 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYIC----- 189
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 190 -----------SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 232
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 42/293 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM--------LRNQMEQVF 412
P E+ + V L+ +G +GSVY A+K + K+ + R ME V
Sbjct: 1 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL 60
Query: 413 AERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPADMARFYFA 471
++ F+ V+ + FE L++E E D + G L ++AR +F
Sbjct: 61 LKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
+ + AV + H+ G++HRD+K +N+LI G +KL DFG + L +Y
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY------- 166
Query: 531 AKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAH 590
F +VY PE+I + +G+ WS+G++LY+ + G +PF E EE+
Sbjct: 167 -TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIRG 219
Query: 591 TVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
V + E + +I L P DR E++ HP+ ++
Sbjct: 220 QVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQDV 261
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 112/272 (41%), Gaps = 24/272 (8%)
Query: 357 FSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERD 416
F K E F+ ++ I +G++G+VY R + A+KK+ + + + + E
Sbjct: 47 FFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR 106
Query: 417 IMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA 476
+ +P + + + LVMEY G L + PL +
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQG 166
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ YLHS+ ++HRD+K N+L++ G +KL DFG + +M+ A
Sbjct: 167 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS--IMAPANXF-------------- 210
Query: 537 KQVYGTPEYIAPEVILRQGYGK---PVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN 593
GTP ++APEVIL G+ VD WS+G+ E P F H
Sbjct: 211 ---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 267
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
++ W ++ + LQ+ P+DR
Sbjct: 268 NESPALQSGHWSEYF--RNFVDSCLQKIPQDR 297
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 7/212 (3%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVF-AERDIMSFTD 422
+D +++ G +G V H+ET + MK++I+ + ++ F E +M +
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR----FDEETQRTFLKEVKVMRCLE 65
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL-AVEYLH 481
+P V+ K L + EY++GG ++K+ R FA+ + + YLH
Sbjct: 66 HPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH 125
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
S I+HRDL N L+ ++ + DFGL+++ ++ T + + V G
Sbjct: 126 SMNIIHRDLNSHNCLVRENKNVVVADFGLARL-MVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFL 573
P ++APE+I + Y + VD +S G++L E +
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 87 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 140
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVA-----------DPDHDHTGFLTEY 189
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 190 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 247
Query: 598 WPSEDDW--PIQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 248 SPSQEDLNCGINLKARNYLLSLPHKNKVPWNRL 280
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 34/234 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +N+ Q+ + D +
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDHCNI 75
Query: 421 TDNPFVVTMYCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAET 473
+ Y S E K +L LV++YV S K T LP + Y +
Sbjct: 76 VRLRYF--FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLYMYQL 131
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + Y C
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYIC----- 184
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 185 -----------SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V A+KK+ S +NQ
Sbjct: 11 YSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKL---SRPFQNQTHA 67
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E ++ ++ ++++ F +K L LVME ++ C + L
Sbjct: 68 KRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LD 124
Query: 463 ADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNL 522
+ + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTP 184
Query: 523 YECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y T Y APEVIL GY VD WS+G I+ E + GCV F G
Sbjct: 185 YVV----------------TRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQG 227
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 34/234 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK+++ +N+ Q+ + D +
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK-AFKNRELQIMRKLDHCNI 75
Query: 421 TDNPFVVTMYCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAET 473
+ Y S E K +L LV++YV S K T LP + Y +
Sbjct: 76 VRLRYF--FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLYMYQL 131
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + Y C
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYIC----- 184
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 185 -----------SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 34/234 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK+++ +N+ Q+ + D +
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK-AFKNRELQIMRKLDHCNI 75
Query: 421 TDNPFVVTMYCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAET 473
+ Y S E K +L LV++YV S K T LP + Y +
Sbjct: 76 VRLRYF--FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLYMYQL 131
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + Y C
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYIC----- 184
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 185 -----------SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 38/246 (15%)
Query: 352 SKKDK--FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
SK+D +S ++ FTV+K I +GA G V + A+KK+ S
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL---SRP 60
Query: 404 LRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLL 455
+NQ ++ + E +M ++ ++ + F +K L +VME ++ C +
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 120
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
L + + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++
Sbjct: 121 ME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
S Y T Y APEVIL GY + VD WS+G I+ E + G
Sbjct: 178 TSFMMTPYVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
Query: 576 CVPFFG 581
V F G
Sbjct: 222 GVLFPG 227
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 38/246 (15%)
Query: 352 SKKDK--FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
SK+D +S ++ FTV+K I +GA G V + A+KK+ S
Sbjct: 5 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL---SRP 61
Query: 404 LRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLL 455
+NQ ++ + E +M ++ ++ + F +K L +VME ++ C +
Sbjct: 62 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 121
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
L + + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++
Sbjct: 122 ME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
S Y T Y APEVIL GY + VD WS+G I+ E + G
Sbjct: 179 TSFMMTPYVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
Query: 576 CVPFFG 581
V F G
Sbjct: 223 GVLFPG 228
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 38/246 (15%)
Query: 352 SKKDK--FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
SK+D +S ++ FTV+K I +GA G V + A+KK+ S
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL---SRP 60
Query: 404 LRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLL 455
+NQ ++ + E +M ++ ++ + F +K L +VME ++ C +
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 120
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
L + + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++
Sbjct: 121 ME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
S Y T Y APEVIL GY + VD WS+G I+ E + G
Sbjct: 178 TSFMMTPYVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
Query: 576 CVPFFG 581
V F G
Sbjct: 222 GVLFPG 227
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 42/248 (16%)
Query: 352 SKKDK--FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
SK+D +S ++ FTV+K I +GA G V + A+KK+ S
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL---SRP 60
Query: 404 LRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLL 455
+NQ ++ + E +M ++ ++ + F +K L +VME ++ L
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----L 115
Query: 456 KNTGPLPADMAR--FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKM 513
+ D R + + ++ +++LHS GI+HRDLKP N+++ + +K+ DFGL++
Sbjct: 116 SQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 514 GLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFL 573
S Y T Y APEVIL GY + VD WS+G I+ E +
Sbjct: 176 AGTSFMMTPYVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Query: 574 VGCVPFFG 581
G V F G
Sbjct: 220 KGGVLFPG 227
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 89 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 142
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLXEX 191
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 192 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 249
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 90 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 143
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 144 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLXEX 192
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 193 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 250
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 251 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 283
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
+ G +G V H++T ++ A+K+ + L +N+ E+ E IM ++P VV+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNR-ERWCLEIQIMKKLNHPNVVSARE 79
Query: 432 SFETKKHLC------LVMEYVEGGDCASLL---KNTGPLPADMARFYFAETVLAVEYLHS 482
+ + L L MEY EGGD L +N L R ++ A+ YLH
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 483 YGIVHRDLKPDNLLITA----LGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
I+HRDLKP+N+++ L H K+ D G +K E D + +
Sbjct: 140 NRIIHRDLKPENIVLQPGPQRLIH-KIIDLGYAK---------------ELDQGELCTEF 183
Query: 539 VYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFF 580
V GT +Y+APE++ ++ Y VD+WS G + +E + G PF
Sbjct: 184 V-GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 224
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYC 431
+ G +G V H++T ++ A+K+ + L +N+ E+ E IM ++P VV+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNR-ERWCLEIQIMKKLNHPNVVSARE 80
Query: 432 SFETKKHLC------LVMEYVEGGDCASLL---KNTGPLPADMARFYFAETVLAVEYLHS 482
+ + L L MEY EGGD L +N L R ++ A+ YLH
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 483 YGIVHRDLKPDNLLITA----LGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
I+HRDLKP+N+++ L H K+ D G +K E D + +
Sbjct: 141 NRIIHRDLKPENIVLQPGPQRLIH-KIIDLGYAK---------------ELDQGELCTEF 184
Query: 539 VYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFF 580
V GT +Y+APE++ ++ Y VD+WS G + +E + G PF
Sbjct: 185 V-GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 123/303 (40%), Gaps = 54/303 (17%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV--FAERDIMSFTD--NPFVV 427
I G YG+V+ +++ET + A+K++ L + E V A R+I + + +V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-----RLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 428 TMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVH 487
++ + K L LV E+ + G L ++ + + + + + + HS ++H
Sbjct: 65 RLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLH 124
Query: 488 RDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIA 547
RDLKP NLLI G +KL DFGL++ + Y V T Y
Sbjct: 125 RDLKPQNLLINRNGELKLADFGLARA--FGIPVRCYSAEVV-------------TLWYRP 169
Query: 548 PEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWP- 605
P+V+ + Y +D WS G I E P F + + + P+E+ WP
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPS 229
Query: 606 -------------------------IQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
+ + ++ +LL+ NP R+ E +HPYF
Sbjct: 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISA---EEALQHPYF 286
Query: 641 SNL 643
S+
Sbjct: 287 SDF 289
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 87 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 140
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLTEY 189
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 190 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 247
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 248 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 280
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 35/226 (15%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY 430
++ GA +V+ RHK+T FA+K + N++ ++ E +++ ++ +V ++
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIK--VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 431 CSFE--TKKHLCLVMEYVEGGDCASLLK---NTGPLPADMARFYFAETVLAVEYLHSYGI 485
E T +H L+ME+ G ++L+ N LP + V + +L GI
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 486 VHRDLKPDNLL--ITALGH--IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
VHR++KP N++ I G KLTDFG ++ D +QF +YG
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE--------------LEDDEQFVS--LYG 177
Query: 542 TPEYIAPEV----ILRQ----GYGKPVDWWSMGVILYEFLVGCVPF 579
T EY+ P++ +LR+ YG VD WS+GV Y G +PF
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 19/226 (8%)
Query: 369 IKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI--MSFTDNPFV 426
+ L+ G+YG V R+K+T + A+KK +++ ++M + A R+I + + +
Sbjct: 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD---DDKMVKKIAMREIKLLKQLRHENL 86
Query: 427 VTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIV 486
V + + KK LV E+V+ L L + + Y + + + + HS+ I+
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNII 146
Query: 487 HRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYI 546
HRD+KP+N+L++ G +KL DFG ++ +LA E Y + A ++ Y PE +
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFAR----TLAAP-GEVYDDEVATRW-----YRAPELL 196
Query: 547 APEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTV 592
+V YGK VD W++G ++ E +G F G++ + H +
Sbjct: 197 VGDV----KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 85 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 138
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVA-----------DPDHDHTGFLTEY 187
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 188 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 245
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 87 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 140
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLTEY 189
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 190 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 247
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 248 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 280
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 93 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 146
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 147 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLTEY 195
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 196 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 253
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 254 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 286
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 85 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 138
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLTEY 187
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 188 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 245
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 85 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 138
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA-----------DPDHDHTGFLTEY 187
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 188 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 245
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 90 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 143
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 144 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLTEY 192
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 193 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 250
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 251 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 283
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 91 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 144
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 145 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLTEY 193
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 194 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 251
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 252 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 284
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 82 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 135
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 136 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLTEY 184
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 185 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 242
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 243 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 275
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 89 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 142
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLTEY 191
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 192 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 249
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 85 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 138
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA-----------DPDHDHTGFLTEY 187
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 188 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 245
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 89 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 142
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA-----------DPDHDHTGFLTEY 191
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 192 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 249
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 83 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 136
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 137 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLTEY 185
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 186 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 243
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 244 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 276
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 85 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 138
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLTEY 187
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 188 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 245
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 89 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 142
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA-----------DPDHDHTGFLTEY 191
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 192 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 249
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 105 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 158
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 159 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLTEY 207
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 208 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 265
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 266 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 298
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 124/275 (45%), Gaps = 32/275 (11%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI--MSFTDNPFVVTM 429
+ G +G V+ +++ + M K +K +QV +++I ++ + ++ +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTY-MAKFVKV-----KGTDQVLVKKEISILNIARHRNILHL 66
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF--YFAETVLAVEYLHSYGIVH 487
+ SFE+ + L ++ E++ G D + NT + Y + A+++LHS+ I H
Sbjct: 67 HESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNIGH 125
Query: 488 RDLKPDNLLITAL--GHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
D++P+N++ IK+ +FG ++ + N + ++ PEY
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQ--LKPGDNF--------------RLLFTAPEY 169
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWP 605
APEV D WS+G ++Y L G PF ET +++ + +N + + E
Sbjct: 170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKE 229
Query: 606 IQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
I +EA + LL + + R+ E +HP+
Sbjct: 230 ISIEAMDFVDRLLVKERKSRMTAS---EALQHPWL 261
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 113/238 (47%), Gaps = 42/238 (17%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +++ IM
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRK 103
Query: 421 TDNPFVVTM----YCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFY 469
D+ +V + Y S E K +L LV++YV S K T LP + Y
Sbjct: 104 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLY 161
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECY 526
+ ++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + E
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRG------EPN 213
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
V ++ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 214 VSXICSRY----------YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 35/226 (15%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY 430
++ GA +V+ RHK+T FA+K + N++ ++ E +++ ++ +V ++
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIK--VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 431 CSFE--TKKHLCLVMEYVEGGDCASLLK---NTGPLPADMARFYFAETVLAVEYLHSYGI 485
E T +H L+ME+ G ++L+ N LP + V + +L GI
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 486 VHRDLKPDNLL--ITALGH--IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
VHR++KP N++ I G KLTDFG ++ D +QF +YG
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE--------------LEDDEQFV--XLYG 177
Query: 542 TPEYIAPEV----ILRQ----GYGKPVDWWSMGVILYEFLVGCVPF 579
T EY+ P++ +LR+ YG VD WS+GV Y G +PF
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 29/230 (12%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME--QVFAERDIMSFT 421
+++ + LI G+YG VYL K T + A+KK+ + M + ++ ++ E I++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV---NRMFEDLIDCKRILREITILNRL 82
Query: 422 DNPFVVTMY--------CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
+ +++ +Y F+ L +V+E + D L K L + +
Sbjct: 83 KSDYIIRLYDLIIPDDLLKFD---ELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNL 138
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERD--- 530
+L ++H GI+HRDLKP N L+ +K+ DFGL++ TN+ E +
Sbjct: 139 LLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 531 ------AKQFSDKQVYGTPEYIAPEVILRQ-GYGKPVDWWSMGVILYEFL 573
KQ + V T Y APE+IL Q Y K +D WS G I E L
Sbjct: 199 PHNKNLKKQLTSHVV--TRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 42/248 (16%)
Query: 352 SKKDK--FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
SK+D +S ++ FTV+K I +GA G V + A+KK+ S
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL---SRP 60
Query: 404 LRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLL 455
+NQ ++ + E +M ++ ++ + F +K L +VME ++ L
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----L 115
Query: 456 KNTGPLPADMAR--FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKM 513
+ D R + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++
Sbjct: 116 SQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 514 GLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFL 573
S Y T Y APEVIL GY + VD WS+G I+ E +
Sbjct: 176 AGTSFMMTPYVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Query: 574 VGCVPFFG 581
G V F G
Sbjct: 220 KGGVLFPG 227
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 128/299 (42%), Gaps = 44/299 (14%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM-SFTDNPFVVTM 429
++ GA+ V + T Q +A+K I K +R++ VF E +++ + V+ +
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR---VFREVEMLYQCQGHRNVLEL 76
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRD 489
FE + LV E + GG S + A + A+++LH+ GI HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 490 LKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY---GTP 543
LKP+N+L + +K+ DF L G+ + D S ++ G+
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGS-GIK----------LNGDCSPISTPELLTPCGSA 185
Query: 544 EYIAPEVILRQG-----YGKPVDWWSMGVILYEFLVGCVPFFGETPEE------------ 586
EY+APEV+ Y K D WS+GVILY L G PF G +
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245
Query: 587 ---LFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
LF E+P +D I AK +I+ LL ++ + RL +V +HP+
Sbjct: 246 QNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAA---QVLQHPWVQG 301
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 33/281 (11%)
Query: 346 NSDSYCSKKDKFSKTPNEN---DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSL 402
N+ Y + + + P+++ + V+K+I G++G V + Q A+K +
Sbjct: 76 NNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR 135
Query: 403 MLRNQMEQV-FAERDIMSFTDNPF-VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT-G 459
R E++ E DN V+ M +F + H+C+ E + + KN
Sbjct: 136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQ 195
Query: 460 PLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGH--IKLTDFGLSKMGLMS 517
+ R + + ++ LH I+H DLKP+N+L+ G IK+ DFG S
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS------ 249
Query: 518 LATNLYECYVERDAKQFSDKQVYGTPE---YIAPEVILRQGYGKPVDWWSMGVILYEFLV 574
CY ++VY + Y APEVIL YG P+D WS+G IL E L
Sbjct: 250 -------CY--------EHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLT 294
Query: 575 GCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIIT 615
G GE + A + + + PS+ AK+ ++
Sbjct: 295 GYPLLPGEDEGDQLACMI-ELLGMPSQKLLDASKRAKNFVS 334
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 33/281 (11%)
Query: 346 NSDSYCSKKDKFSKTPNEN---DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSL 402
N+ Y + + + P+++ + V+K+I G++G V + Q A+K +
Sbjct: 76 NNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR 135
Query: 403 MLRNQMEQV-FAERDIMSFTDNPF-VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT-G 459
R E++ E DN V+ M +F + H+C+ E + + KN
Sbjct: 136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQ 195
Query: 460 PLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGH--IKLTDFGLSKMGLMS 517
+ R + + ++ LH I+H DLKP+N+L+ G IK+ DFG S
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS------ 249
Query: 518 LATNLYECYVERDAKQFSDKQVYGTPE---YIAPEVILRQGYGKPVDWWSMGVILYEFLV 574
CY ++VY + Y APEVIL YG P+D WS+G IL E L
Sbjct: 250 -------CY--------EHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLT 294
Query: 575 GCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIIT 615
G GE + A + + + PS+ AK+ ++
Sbjct: 295 GYPLLPGEDEGDQLACMI-ELLGMPSQKLLDASKRAKNFVS 334
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A++KI ++ + + ++ F +I+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 89 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 142
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLTEY 191
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 192 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 249
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 110/234 (47%), Gaps = 34/234 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK+++ +N+ Q+ + D +
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK-AFKNRELQIMRKLDHCNI 75
Query: 421 TDNPFVVTMYCSFETKK--HLCLVMEYVEG-----GDCASLLKNTGPLPADMARFYFAET 473
+ Y S E K +L LV++YV S K T LP + Y +
Sbjct: 76 VRLRYF--FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQT--LPVIYVKLYMYQL 131
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + E +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRG----------EPN 179
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 180 VSXICSRY------YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 113/238 (47%), Gaps = 42/238 (17%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +++ IM
Sbjct: 29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRK 81
Query: 421 TDNPFVVTM----YCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFY 469
D+ +V + Y S E K +L LV++YV S K T LP + Y
Sbjct: 82 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLY 139
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECY 526
+ ++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + E
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRG------EPN 191
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
V ++ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 192 VSXICSRY----------YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 48/251 (19%)
Query: 352 SKKDK--FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
SK+D +S ++ FTV+K I +GA G V + A+KK+ S
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL---SRP 60
Query: 404 LRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLL 455
+NQ ++ + E +M ++ ++ + F +K L +VME ++ C +
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 120
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
L + + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++
Sbjct: 121 ME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPE-----YIAPEVILRQGYGKPVDWWSMGVILY 570
S TPE Y APEVIL GY + VD WS+G I+
Sbjct: 178 TSFMM---------------------TPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 571 EFLVGCVPFFG 581
E + G V F G
Sbjct: 217 EMIKGGVLFPG 227
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKN-SLMLRNQMEQVFAERDIMSFTDN 423
+ T+ ++I G +G VY R A+K + + +E V E + + +
Sbjct: 8 ELTLEEIIGIGGFGKVY--RAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH 65
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSY 483
P ++ + + +LCLVME+ GG +L +P D+ + + + YLH
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIARGMNYLHDE 124
Query: 484 GIV---HRDLKPDNLLITALGH--------IKLTDFGLSKMGLMSLATNLYECYVERDAK 532
IV HRDLK N+LI +K+TDFGL+ R+
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-----------------REWH 167
Query: 533 QFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
+ + G ++APEVI + K D WS GV+L+E L G VPF G
Sbjct: 168 RTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 34/234 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +N+ Q+ + D +
Sbjct: 36 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDHCNI 94
Query: 421 TDNPFVVTMYCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAET 473
+ Y S E K +L LV++YV S K T LP + Y +
Sbjct: 95 VRLRYF--FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLYMYQL 150
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + E V
Sbjct: 151 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRG------EPNVSXI 202
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
++ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 203 CSRY----------YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 246
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 42/248 (16%)
Query: 352 SKKDK--FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
SK+D +S ++ FTV+K I +GA G V + A+KK+ S
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL---SRP 60
Query: 404 LRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLL 455
+NQ ++ + E +M ++ ++ + F +K L +VME ++ L
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----L 115
Query: 456 KNTGPLPADMAR--FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKM 513
+ D R + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++
Sbjct: 116 SQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 514 GLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFL 573
S Y T Y APEVIL GY + VD WS+G I+ E +
Sbjct: 176 AGTSFMMTPYVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Query: 574 VGCVPFFG 581
G V F G
Sbjct: 220 KGGVLFPG 227
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 34/234 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +N+ Q+ + D +
Sbjct: 25 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDHCNI 83
Query: 421 TDNPFVVTMYCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAET 473
+ Y S E K +L LV++YV S K T LP + Y +
Sbjct: 84 VRLRYF--FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLYMYQL 139
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + E V
Sbjct: 140 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRG------EPNVSXI 191
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
++ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 192 CSRY----------YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 235
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 34/234 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +N+ Q+ + D +
Sbjct: 29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDHCNI 87
Query: 421 TDNPFVVTMYCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAET 473
+ Y S E K +L LV++YV S K T LP + Y +
Sbjct: 88 VRLRYF--FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLYMYQL 143
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + E V
Sbjct: 144 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRG------EPNVSXI 195
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
++ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 196 CSRY----------YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 38/246 (15%)
Query: 352 SKKDK--FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
SK+D +S ++ FTV+K I +GA G V + A+KK+ S
Sbjct: 6 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL---SRP 62
Query: 404 LRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLL 455
+NQ ++ + E +M ++ ++ + F +K L +VME ++ C +
Sbjct: 63 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 122
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
L + + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++
Sbjct: 123 ME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 179
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
S + T Y APEVIL GY + VD WS+G I+ E + G
Sbjct: 180 TSFMMVPFVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
Query: 576 CVPFFG 581
V F G
Sbjct: 224 GVLFPG 229
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 34/223 (15%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+ V +++ GA+G V + K + A+K+I S + + E +S ++
Sbjct: 9 KEIEVEEVVGRGAFGVV--CKAKWRAKDVAIKQIESES-----ERKAFIVELRQLSRVNH 61
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLP---ADMARFYFAETVLAVEYL 480
P +V +Y + +CLVMEY EGG ++L PLP A A + + V YL
Sbjct: 62 PNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 481 HSY---GIVHRDLKPDNLLITALGHI-KLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
HS ++HRDLKP NLL+ A G + K+ DFG + C ++ ++
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-------------CDIQ---THMTN 163
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
+ G+ ++APEV Y + D +S G+IL+E + PF
Sbjct: 164 NK--GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 134/320 (41%), Gaps = 65/320 (20%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
F V ++ G +G+V L + K T A+KK+I++ RN+ Q+ + ++ +P
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQD---LAVLHHPN 80
Query: 426 VVTMYCSFETKK-------HLCLVMEYVEGG---DCASLLKNTGPLPADMARFYFAETVL 475
+V + F T +L +VMEYV C + + P + + + + +
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIR 140
Query: 476 AVEYLH--SYGIVHRDLKPDNLLIT-ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
++ LH S + HRD+KP N+L+ A G +KL DFG +K S Y C
Sbjct: 141 SIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC------- 193
Query: 533 QFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVG---------------C 576
+ Y APE+I Q Y VD WS+G I E ++G
Sbjct: 194 ---------SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEI 244
Query: 577 VPFFGETPEELF-----AHTVND-----DIEWP---SEDDWPIQVEAKSIITDLLQQNPR 623
V G E+ +HT D I W S+ EA +++ LLQ P
Sbjct: 245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPE 304
Query: 624 DRLGTGGPHEVKEHPYFSNL 643
+R+ P+E HPYF L
Sbjct: 305 ERM---KPYEALCHPYFDEL 321
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 32/241 (13%)
Query: 346 NSDSYCSKKDKFSKTPNEN---DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSL 402
N+ Y + + + P+++ + V+K+I G +G V + Q A+K +
Sbjct: 76 NNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKR 135
Query: 403 MLRNQMEQV-FAERDIMSFTDNPF-VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT-G 459
R E++ E DN V+ M +F + H+C+ E + + KN
Sbjct: 136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQ 195
Query: 460 PLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGH--IKLTDFGLSKMGLMS 517
+ R + + ++ LH I+H DLKP+N+L+ G IK+ DFG S
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS------ 249
Query: 518 LATNLYECYVERDAKQFSDKQVYGTPE---YIAPEVILRQGYGKPVDWWSMGVILYEFLV 574
CY ++VY + Y APEVIL YG P+D WS+G IL E L
Sbjct: 250 -------CY--------EHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLT 294
Query: 575 G 575
G
Sbjct: 295 G 295
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 34/234 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +N+ Q+ + D +
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDHCNI 75
Query: 421 TDNPFVVTMYCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAET 473
+ Y S E K +L LV++YV S K T LP + Y +
Sbjct: 76 VRLRYF--FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLYMYQL 131
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + E +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRG----------EPN 179
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 180 VSXICSRY------YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 34/223 (15%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
+ V +++ GA+G V + K + A+K+I S + + E +S ++
Sbjct: 8 KEIEVEEVVGRGAFGVV--CKAKWRAKDVAIKQIESES-----ERKAFIVELRQLSRVNH 60
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLP---ADMARFYFAETVLAVEYL 480
P +V +Y + +CLVMEY EGG ++L PLP A A + + V YL
Sbjct: 61 PNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 481 HSY---GIVHRDLKPDNLLITALGHI-KLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
HS ++HRDLKP NLL+ A G + K+ DFG + C ++ ++
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-------------CDIQ---THMTN 162
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
+ G+ ++APEV Y + D +S G+IL+E + PF
Sbjct: 163 NK--GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 34/234 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +N+ Q+ + D +
Sbjct: 18 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDHCNI 76
Query: 421 TDNPFVVTMYCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAET 473
+ Y S E K +L LV++YV S K T LP + Y +
Sbjct: 77 VRLRYF--FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLYMYQL 132
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + E +
Sbjct: 133 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRG----------EPN 180
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 181 VSXICSRY------YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 228
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 34/234 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +N+ Q+ + D +
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDHCNI 75
Query: 421 TDNPFVVTMYCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAET 473
+ Y S E K +L LV++YV S K T LP + Y +
Sbjct: 76 VRLRYF--FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLYMYQL 131
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + E +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRG----------EPN 179
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 180 VSXICSRY------YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 34/234 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +N+ Q+ + D +
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDHCNI 75
Query: 421 TDNPFVVTMYCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAET 473
+ Y S E K +L LV++YV S K T LP + Y +
Sbjct: 76 VRLRYF--FYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLYMYQL 131
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + E +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRG----------EPN 179
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 180 VSXICSRY------YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK L D ++ + + ++
Sbjct: 89 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-CQHLSNDHICYFLYQILRGLK 142
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLTEY 191
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 192 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 249
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
PS++D I ++A++ + L +N P +RL
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 31/273 (11%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI--IKNSLMLRNQMEQV-----FAERDIM 418
+T + I GAYG V + R A+KKI ++ + + ++ F +I+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
D + + E K + +V + +E D LLK T L D ++ + + ++
Sbjct: 83 GIND----IIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLK 136
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS ++HRDLKP NLL+ +K+ DFGL+++ + D F +
Sbjct: 137 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----------DPDHDHTGFLTEY 185
Query: 539 VYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIE 597
V T Y APE++L +GY K +D WS+G IL E L F G+ + H + +
Sbjct: 186 V-ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-ILG 243
Query: 598 WPSEDDWP--IQVEAKSIITDLLQQN--PRDRL 626
P ++D I ++A++ + L +N P +RL
Sbjct: 244 SPEQEDLNCIINLKARNYLLSLPHKNKVPWNRL 276
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 34/234 (14%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E +T K+I NG++G VY + ++ + A+KK++++ +N+ Q+ + D +
Sbjct: 21 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDHCNI 79
Query: 421 TDNPFVVTMYCSFETKK--HLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFAET 473
+ Y S E K +L LV++YV S K T LP + Y +
Sbjct: 80 VRLRYF--FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT--LPVIYVKLYMYQL 135
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLI---TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
++ Y+HS+GI HRD+KP NLL+ TA+ +KL DFG +K + E +
Sbjct: 136 FRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRG----------EPN 183
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
+ Y APE+I Y +D WS G +L E L+G F G++
Sbjct: 184 VSXICSRY------YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 231
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 123/303 (40%), Gaps = 54/303 (17%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV--FAERDIMSFTD--NPFVV 427
I G YG+V+ +++ET + A+K++ L + E V A R+I + + +V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-----RLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 428 TMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVH 487
++ + K L LV E+ + G L ++ + + + + + + HS ++H
Sbjct: 65 RLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLH 124
Query: 488 RDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIA 547
RDLKP NLLI G +KL +FGL++ + Y V T Y
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARA--FGIPVRCYSAEVV-------------TLWYRP 169
Query: 548 PEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWP- 605
P+V+ + Y +D WS G I E P F + + + P+E+ WP
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS 229
Query: 606 -------------------------IQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
+ + ++ +LL+ NP R+ E +HPYF
Sbjct: 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISA---EEALQHPYF 286
Query: 641 SNL 643
S+
Sbjct: 287 SDF 289
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 29/240 (12%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSFTDNPFVV 427
I G YG VY ++ + FA+KKI L + E + E I+ + +V
Sbjct: 10 IGEGTYGVVYKAQNNYG-ETFALKKI-----RLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 428 TMYCSFETKKHLCLVMEYVEGGDCASLLKNT-GPLPADMARFYFAETVLAVEYLHSYGIV 486
+Y TKK L LV E+++ D LL G L + A+ + + + + Y H ++
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 487 HRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYI 546
HRDLKP NLLI G +K+ DFGL++ + + +E T Y
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV---------------TLWYR 167
Query: 547 APEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWP 605
AP+V++ + Y +D WS+G I E + G P F E + + P+ +WP
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGA-PLFPGVSEADQLMRIFRILGTPNSKNWP 226
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 42/248 (16%)
Query: 352 SKKDK--FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
SK+D +S ++ FTV+K I +GA G V + A+KK+ S
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL---SRP 60
Query: 404 LRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLL 455
+NQ ++ + E +M ++ ++ + F +K L +VME ++ L
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----L 115
Query: 456 KNTGPLPADMAR--FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKM 513
+ D R + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++
Sbjct: 116 SQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 514 GLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFL 573
S Y T Y APEVIL GY + VD WS+G I+ E +
Sbjct: 176 AGTSFMMTPYVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
Query: 574 VGCVPFFG 581
G V F G
Sbjct: 220 KGGVLFPG 227
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 50/261 (19%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME----QVFAERDIMSFTDNPFVV 427
I G +G V+ RH++T Q+ A+KK+ ++ N+ E E I+ + VV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-----LMENEKEGFPITALREIKILQLLKHENVV 80
Query: 428 TMYCSFETKKH--------LCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE- 478
+ TK + LV ++ E D A LL N + +F +E ++
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNV------LVKFTLSEIKRVMQM 133
Query: 479 ------YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
Y+H I+HRD+K N+LIT G +KL DFGL++ SLA N
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA--FSLAKN-------SQPN 184
Query: 533 QFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFA-- 589
++ ++ V T Y PE++L + YG P+D W G I+ E G T + A
Sbjct: 185 RYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
Query: 590 ----HTVNDDIEWPSEDDWPI 606
++ ++ WP+ D++ +
Sbjct: 243 SQLCGSITPEV-WPNVDNYEL 262
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 155/371 (41%), Gaps = 103/371 (27%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+++ K + G++G V V E+ +RFA+KK++++ +N+ E DIM D+
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-RYKNR------ELDIMKVLDHVN 61
Query: 426 VVTMYCSFET--------------------------------------KKHLCLVMEYVE 447
++ + F T K+L ++MEYV
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 448 G---GDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGH-I 503
S +++ +P ++ Y + AV ++HS GI HRD+KP NLL+ + + +
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTL 181
Query: 504 KLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQG-YGKPVDW 562
KL DFG +K + S E V +F Y APE++L Y +D
Sbjct: 182 KLCDFGSAKKLIPS------EPSVAXICSRF----------YRAPELMLGATEYTPSIDL 225
Query: 563 WSMGVILYEFLVGCVPFFGETPEELFAHTVN-----------------DDIEWPS--EDD 603
WS+G + E ++G F GET + + ++ +P+ D
Sbjct: 226 WSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKD 285
Query: 604 W-PIQVEAK-SIITDLLQQ----NPRDRLGTGGPHEVKEHPYFSNL--DWNSLLRHKAEF 655
W I E S+ DLL+Q P R+ P+E HP+F +L + S +++ + F
Sbjct: 286 WRKILPEGTPSLAIDLLEQILRYEPDLRI---NPYEAMAHPFFDHLRNSYESEVKNNSNF 342
Query: 656 -------IPQL 659
IPQL
Sbjct: 343 PHGVNQNIPQL 353
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 29/240 (12%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSFTDNPFVV 427
I G YG VY ++ + FA+KKI L + E + E I+ + +V
Sbjct: 10 IGEGTYGVVYKAQNNYG-ETFALKKI-----RLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 428 TMYCSFETKKHLCLVMEYVEGGDCASLLKNT-GPLPADMARFYFAETVLAVEYLHSYGIV 486
+Y TKK L LV E+++ D LL G L + A+ + + + + Y H ++
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 487 HRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYI 546
HRDLKP NLLI G +K+ DFGL++ + + +E T Y
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV---------------TLWYR 167
Query: 547 APEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWP 605
AP+V++ + Y +D WS+G I E +V P F E + + P+ +WP
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAE-MVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP 226
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 29/240 (12%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSFTDNPFVV 427
I G YG VY ++ + FA+KKI L + E + E I+ + +V
Sbjct: 10 IGEGTYGVVYKAQNNYG-ETFALKKI-----RLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 428 TMYCSFETKKHLCLVMEYVEGGDCASLLKNT-GPLPADMARFYFAETVLAVEYLHSYGIV 486
+Y TKK L LV E+++ D LL G L + A+ + + + + Y H ++
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 487 HRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYI 546
HRDLKP NLLI G +K+ DFGL++ + + +E T Y
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV---------------TLWYR 167
Query: 547 APEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWP 605
AP+V++ + Y +D WS+G I E +V P F E + + P+ +WP
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAE-MVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP 226
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 46/257 (17%)
Query: 349 SYCSKKDKFSKTPNENDF----------TVIKL------ISNGAYGSVYLVRHKETRQRF 392
SY +K SK+ +N F TV+K I +GA G V +
Sbjct: 31 SYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV 90
Query: 393 AMKKIIKNSLMLRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVME 444
A+KK+ S +NQ ++ + E +M ++ ++++ F +K L LVME
Sbjct: 91 AIKKL---SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 445 YVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIK 504
++ C + L + + + + +++LHS GI+HRDLKP N+++ + +K
Sbjct: 148 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204
Query: 505 LTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWS 564
+ DFGL++ S Y T Y APEVIL GY + VD WS
Sbjct: 205 ILDFGLARTAGTSFMMTPYVV----------------TRYYRAPEVILGMGYKENVDIWS 248
Query: 565 MGVILYEFLVGCVPFFG 581
+G I+ E + + F G
Sbjct: 249 VGCIMGEMVRHKILFPG 265
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 38/246 (15%)
Query: 352 SKKDK--FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
SK+D +S ++ FTV+K I +GA G V + A+KK+ S
Sbjct: 9 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL---SRP 65
Query: 404 LRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLL 455
+NQ ++ + E +M ++ ++ + F +K L +VME ++ C +
Sbjct: 66 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 125
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
L + + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++
Sbjct: 126 ME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 182
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
S Y T Y APEVIL GY + VD WS+G I+ E +
Sbjct: 183 TSFMMTPYVV----------------TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCH 226
Query: 576 CVPFFG 581
+ F G
Sbjct: 227 KILFPG 232
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 46/257 (17%)
Query: 349 SYCSKKDKFSKTPNENDF----------TVIKL------ISNGAYGSVYLVRHKETRQRF 392
SY +K SK+ +N F TV+K I +GA G V +
Sbjct: 31 SYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV 90
Query: 393 AMKKIIKNSLMLRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVME 444
A+KK+ S +NQ ++ + E +M ++ ++++ F +K L LVME
Sbjct: 91 AIKKL---SRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 445 YVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIK 504
++ C + L + + + + +++LHS GI+HRDLKP N+++ + +K
Sbjct: 148 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204
Query: 505 LTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWS 564
+ DFGL++ S Y T Y APEVIL GY + VD WS
Sbjct: 205 ILDFGLARTAGTSFMMTPYVV----------------TRYYRAPEVILGMGYKENVDIWS 248
Query: 565 MGVILYEFLVGCVPFFG 581
+G I+ E + + F G
Sbjct: 249 VGCIMGEMVRHKILFPG 265
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V + A+KK+ S +NQ
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL---SRPFQNQTHA 67
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E +M ++ ++++ F +K L LVME ++ C + L
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LD 124
Query: 463 ADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNL 522
+ + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ S
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 184
Query: 523 YECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y T Y APEVIL GY + VD WS+G I+ E + + F G
Sbjct: 185 YVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 50/261 (19%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME----QVFAERDIMSFTDNPFVV 427
I G +G V+ RH++T Q+ A+KK+ ++ N+ E E I+ + VV
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV-----LMENEKEGFPITALREIKILQLLKHENVV 79
Query: 428 TMYCSFETKKH--------LCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE- 478
+ TK + LV ++ E D A LL N + +F +E ++
Sbjct: 80 NLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNV------LVKFTLSEIKRVMQM 132
Query: 479 ------YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
Y+H I+HRD+K N+LIT G +KL DFGL++ SLA N
Sbjct: 133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA--FSLAKN-------SQPN 183
Query: 533 QFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFA-- 589
++ ++ V T Y PE++L + YG P+D W G I+ E G T + A
Sbjct: 184 RYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 241
Query: 590 ----HTVNDDIEWPSEDDWPI 606
++ ++ WP+ D++ +
Sbjct: 242 SQLCGSITPEV-WPNVDNYEL 261
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 59/283 (20%)
Query: 350 YCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME 409
+C + K+ K I G +G V+ RH++T Q+ A+KK+ ++ N+ E
Sbjct: 13 FCDEVSKYEKLAK---------IGQGTFGEVFKARHRKTGQKVALKKV-----LMENEKE 58
Query: 410 ----QVFAERDIMSFTDNPFVVTMY--CSFET------KKHLCLVMEYVEGGDCASLLKN 457
E I+ + VV + C + K + LV ++ E D A LL N
Sbjct: 59 GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSN 117
Query: 458 TGPLPADMARFYFAETVLAVE-------YLHSYGIVHRDLKPDNLLITALGHIKLTDFGL 510
+ +F +E ++ Y+H I+HRD+K N+LIT G +KL DFGL
Sbjct: 118 V------LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL 171
Query: 511 SKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVIL 569
++ SLA N ++ ++ V T Y PE++L + YG P+D W G I+
Sbjct: 172 ARA--FSLAKN-------SQPNRYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIM 220
Query: 570 YEFLVGCVPFFGETPEELFA------HTVNDDIEWPSEDDWPI 606
E G T + A ++ ++ WP+ D++ +
Sbjct: 221 AEMWTRSPIMQGNTEQHQLALISQLCGSITPEV-WPNVDNYEL 262
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V + A+KK+ S +NQ
Sbjct: 10 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL---SRPFQNQTHA 66
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E +M ++ ++++ F +K L LVME ++ C + L
Sbjct: 67 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LD 123
Query: 463 ADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNL 522
+ + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ S
Sbjct: 124 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 183
Query: 523 YECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y T Y APEVIL GY + VD WS+G I+ E + + F G
Sbjct: 184 YVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 226
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V + A+KK+ S +NQ
Sbjct: 12 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL---SRPFQNQTHA 68
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E +M ++ ++++ F +K L LVME ++ C + L
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LD 125
Query: 463 ADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNL 522
+ + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ S
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 185
Query: 523 YECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y T Y APEVIL GY + VD WS+G I+ E + + F G
Sbjct: 186 YVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V + A+KK+ S +NQ
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL---SRPFQNQTHA 67
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E +M ++ ++++ F +K L LVME ++ C + L
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LD 124
Query: 463 ADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNL 522
+ + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ S
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 184
Query: 523 YECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y T Y APEVIL GY + VD WS+G I+ E + + F G
Sbjct: 185 YVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V + A+KK+ S +NQ
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL---SRPFQNQTHA 67
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E +M ++ ++++ F +K L LVME ++ C + L
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELD 124
Query: 463 ADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNL 522
+ + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ S
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP 184
Query: 523 YECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y T Y APEVIL GY + VD WS+G I+ E + + F G
Sbjct: 185 YVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 50/261 (19%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME----QVFAERDIMSFTDNPFVV 427
I G +G V+ RH++T Q+ A+KK+ ++ N+ E E I+ + VV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-----LMENEKEGFPITALREIKILQLLKHENVV 80
Query: 428 TMYCSFETKKH--------LCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE- 478
+ TK + LV ++ E D A LL N + +F +E ++
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNV------LVKFTLSEIKRVMQM 133
Query: 479 ------YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
Y+H I+HRD+K N+LIT G +KL DFGL++ SLA N
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA--FSLAKN-------SQPN 184
Query: 533 QFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFA-- 589
++ ++ V T Y PE++L + YG P+D W G I+ E G T + A
Sbjct: 185 RYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
Query: 590 ----HTVNDDIEWPSEDDWPI 606
++ ++ WP+ D++ +
Sbjct: 243 SQLCGSITPEV-WPNVDNYEL 262
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V A+KK+ S +NQ
Sbjct: 9 YSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKL---SRPFQNQTHA 65
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E ++ ++ ++++ F +K L LVME ++ C + L
Sbjct: 66 KRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LD 122
Query: 463 ADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNL 522
+ + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ +
Sbjct: 123 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTP 182
Query: 523 YECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y T Y APEVIL GY + VD WS+G I+ E + G V F G
Sbjct: 183 YVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG 225
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V + A+KK+ S +NQ
Sbjct: 12 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL---SRPFQNQTHA 68
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E +M ++ ++++ F +K L LVME ++ C + L
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELD 125
Query: 463 ADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNL 522
+ + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ S
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 185
Query: 523 YECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y T Y APEVIL GY + VD WS+G I+ E + + F G
Sbjct: 186 YVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V + A+KK+ S +NQ
Sbjct: 5 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL---SRPFQNQTHA 61
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E +M ++ ++++ F +K L LVME ++ C + L
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LD 118
Query: 463 ADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNL 522
+ + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ S
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 178
Query: 523 YECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y T Y APEVIL GY + VD WS+G I+ E + + F G
Sbjct: 179 YVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 111/234 (47%), Gaps = 39/234 (16%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
E +T K+I NG++G V+ + E+ + A+KK++++ +N+ E IM
Sbjct: 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDK-RFKNR------ELQIMRIVK 90
Query: 423 NPFVVTMYCSF------ETKKHLCLVMEYV-----EGGDCASLLKNTGPLPADMARFYFA 471
+P VV + F + + L LV+EYV + LK T +P + + Y
Sbjct: 91 HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQT--MPMLLIKLYMY 148
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLI-TALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
+ + ++ Y+HS GI HRD+KP NLL+ G +KL DFG +K+ + E V
Sbjct: 149 QLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG------EPNVSXI 202
Query: 531 AKQFSDKQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGET 583
++ Y APE+I Y +D WS G ++ E + G F GE+
Sbjct: 203 CSRY----------YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V + A+KK+ S +NQ
Sbjct: 4 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL---SRPFQNQTHA 60
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E +M ++ ++++ F +K L LVME ++ C + L
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LD 117
Query: 463 ADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNL 522
+ + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ S
Sbjct: 118 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 177
Query: 523 YECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y T Y APEVIL GY + VD WS+G I+ E + + F G
Sbjct: 178 YVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V + A+KK+ S +NQ
Sbjct: 5 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL---SRPFQNQTHA 61
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E +M ++ ++++ F +K L LVME ++ C + L
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LD 118
Query: 463 ADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNL 522
+ + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ S
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 178
Query: 523 YECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y T Y APEVIL GY + VD WS+G I+ E + + F G
Sbjct: 179 YVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 36/239 (15%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V + A+KK+ S +NQ
Sbjct: 5 YSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL---SRPFQNQTHA 61
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E +M ++ ++ + F +K L +VME ++ C + L
Sbjct: 62 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LD 118
Query: 463 ADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNL 522
+ + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ S
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 178
Query: 523 YECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y T Y APEVIL GY + VD WS+G I+ E + + F G
Sbjct: 179 YVV----------------TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 137/336 (40%), Gaps = 81/336 (24%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERD-----IMSFTDNPFV 426
+ +GAYG+V T + A+KK + R ++FA+R ++ + V
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKK------LYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 427 VTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
+ + F + L LVM ++ G D L+K+ L D +F + + + Y+
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE-KLGEDRIQFLVYQMLKGLRYI 144
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
H+ GI+HRDLKP NL + +K+ DFGL++ +D ++
Sbjct: 145 HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ---------------------ADSEMX 183
Query: 541 G---TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGE-------------- 582
G T Y APEVIL Y + VD WS+G I+ E + G F G
Sbjct: 184 GXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTG 243
Query: 583 TPEELFAHTVNDD---------IEWPSEDDWPIQVEAKSIITDLLQQ----NPRDRLGTG 629
TP F + D E +D I A + +LL++ + R+ G
Sbjct: 244 TPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAG 303
Query: 630 GPHEVKEHPYFSNLDWNSLLRHKAEFIPQLDDEEDT 665
E HPYF +L H E PQ+ +D+
Sbjct: 304 ---EALAHPYFESL-------HDTEDEPQVQKYDDS 329
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 38/246 (15%)
Query: 352 SKKDK--FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
SK+D +S ++ FTV+K I +GA G V + A+KK+ S
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL---SRP 60
Query: 404 LRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLL 455
+NQ ++ + E +M ++ ++ + F +K L +VME ++ C +
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI- 119
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
L + + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++
Sbjct: 120 --QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
S F + T Y APEVIL GY + VD WS+G I+ E +
Sbjct: 178 TS----------------FMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCH 221
Query: 576 CVPFFG 581
+ F G
Sbjct: 222 KILFPG 227
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 38/246 (15%)
Query: 352 SKKDK--FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
SK+D +S ++ FTV+K I +GA G V + A+KK+ S
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL---SRP 60
Query: 404 LRNQ--MEQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLL 455
+NQ ++ + E +M ++ ++ + F +K L +VME ++ C +
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI- 119
Query: 456 KNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGL 515
L + + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++
Sbjct: 120 --QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
S F + T Y APEVIL GY + VD WS+G I+ E +
Sbjct: 178 TS----------------FMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCH 221
Query: 576 CVPFFG 581
+ F G
Sbjct: 222 KILFPG 227
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 92
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 190
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 82
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CAKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 180
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 104/240 (43%), Gaps = 35/240 (14%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHK---ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
N F + I G + SVYL + ++ A+K +I S +R + AE ++
Sbjct: 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIR-----IAAELQCLTV 75
Query: 421 T---DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAV 477
DN V YC F H+ + M Y+E S L L R Y A+
Sbjct: 76 AGGQDNVMGVK-YC-FRKNDHVVIAMPYLEH---ESFLDILNSLSFQEVREYMLNLFKAL 130
Query: 478 EYLHSYGIVHRDLKPDNLLIT-ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ--- 533
+ +H +GIVHRD+KP N L L L DFGL++ G L + +V+ +A+Q
Sbjct: 131 KRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ-GTHDTKIELLK-FVQSEAQQERC 188
Query: 534 --------FSDKQVY----GTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFF 580
S +Q GTP + APEV+ + +D WS GVI L G PF+
Sbjct: 189 SQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 106
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMXGXVA 204
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 133/336 (39%), Gaps = 74/336 (22%)
Query: 366 FTVIKLISNGAYGSVY-LVRHKETRQRFAMKKIIKN-------SLMLRNQMEQVFAERDI 417
+ ++ + G +G V V H+ R A+K IIKN + + N +E++ E+D
Sbjct: 35 YEIVSTLGEGTFGRVVQCVDHRRGGARVALK-IIKNVEKYKEAARLEINVLEKI-NEKD- 91
Query: 418 MSFTDNP-FVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETV 474
DN V M+ F+ H+C+ E + G LK N P P R +
Sbjct: 92 ---PDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQLC 147
Query: 475 LAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSK----MGLMSLATNLYECYVERD 530
AV++LH + H DLKP+N+L + +LT + L K + S A + V+
Sbjct: 148 QAVKFLHDNKLTHTDLKPENILFVNSDY-ELT-YNLEKKRDERSVKSTAVRV----VDFG 201
Query: 531 AKQFSDKQ---VYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF-------- 579
+ F + + T Y APEVIL G+ +P D WS+G I++E+ VG F
Sbjct: 202 SATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREH 261
Query: 580 -------FGETPEELFAHTVNDDIEWPSEDDWPIQVEAK--------------------- 611
G P + T + DW A
Sbjct: 262 LAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEH 321
Query: 612 ----SIITDLLQQNPRDRLGTGGPHEVKEHPYFSNL 643
+I +L+ P RL G E +HP+F+ L
Sbjct: 322 HQLFDLIESMLEYEPAKRLTLG---EALQHPFFARL 354
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
I +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 91
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLAR---------------------HTDDEMTGYVA 189
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMAGFVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K+ L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQ-KLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL + +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDSELKILDFGLCR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMAGFVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 96
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 97 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 155
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 156 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 194
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 195 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 235
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ K S++ ++ + E ++ + V+ +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSII---HAKRTYRELRLLKHMKHENVIGL 98
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 196
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 40/241 (16%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V + A+KK+ S +NQ
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL---SRPFQNQTHA 67
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E +M ++ ++++ F +K L LVME ++ L +
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQME 122
Query: 463 ADMAR--FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLAT 520
D R + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ S
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM 182
Query: 521 NLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFF 580
Y T Y APEVIL GY + VD WS+G I+ E + + F
Sbjct: 183 TPYVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 581 G 581
G
Sbjct: 227 G 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 88
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 148 IIHRDLKPSNLAVNEDSELKILDFGLAR---------------------HTDDEMTGYVA 186
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 92
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 152 IIHRDLKPSNLAVNEDSELKILDFGLAR---------------------HTDDEMTGYVA 190
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 105
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 164
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 203
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 106
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 204
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 40/241 (16%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V + A+KK+ S +NQ
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL---SRPFQNQTHA 67
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E +M ++ ++++ F +K L LVME ++ L +
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQME 122
Query: 463 ADMAR--FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLAT 520
D R + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ S
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM 182
Query: 521 NLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFF 580
Y T Y APEVIL GY + VD WS+G I+ E + + F
Sbjct: 183 TPYVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 581 G 581
G
Sbjct: 227 G 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ-KLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDXELKILDFGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 61/291 (20%)
Query: 364 NDFTVI-KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+D+ V +++ G G V + +K T+++FA+K ++++ R ++E + +
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRA------SQ 69
Query: 423 NPFVVTMYCSFET----KKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLA 476
P +V + +E +K L +VME ++GG+ S +++ G A A
Sbjct: 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 477 VEYLHSYGIVHRDLKPDNLLITAL---GHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
++YLHS I HRD+KP+NLL T+ +KLTDFG +
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---------------------- 167
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE----TPEELFA 589
K+ G + Y K D WS+GVI+Y L G PF+ +
Sbjct: 168 ---KETTG------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 212
Query: 590 HTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
E+P+ + + E K +I +LL+ P R+ E HP+
Sbjct: 213 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT---EFMNHPWI 260
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 38/225 (16%)
Query: 369 IKLISNGAYGSVYLVRHKETRQRFAMKKI---IKNSLMLRNQMEQV-----FAERDIMSF 420
++ + +GAYGSV RQ+ A+KK+ ++ + R ++ +++
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
D V T S E + LV + G D +++K+ L + +F + + ++Y+
Sbjct: 93 LD---VFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQA-LSDEHVQFLVYQLLRGLKYI 147
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
HS GI+HRDLKP N+ + +++ DFGL++ +D+++
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDSELRILDFGLARQ---------------------ADEEMT 186
Query: 541 G---TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
G T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 23/230 (10%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
D + + I G++G+V+ E KI+ ++ + E IM +P
Sbjct: 38 DLNIKEKIGAGSFGTVH---RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPA--DMARFYFAETVL-AVEYLH 481
+V + +L +V EY+ G LL +G + R A V + YLH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 482 SYG--IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
+ IVHR+LK NLL+ +K+ DFGLS++ + + S K
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL---------------KASTFLSSKSA 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFA 589
GTPE++APEV+ + + D +S GVIL+E P+ P ++ A
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA 249
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 40/241 (16%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V + A+KK+ S +NQ
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL---SRPFQNQTHA 67
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E +M ++ ++++ F +K L LVME ++ L +
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQME 122
Query: 463 ADMAR--FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLAT 520
D R + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ S
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM 182
Query: 521 NLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFF 580
Y T Y APEVIL GY + VD WS+G I+ E + + F
Sbjct: 183 TPYVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 581 G 581
G
Sbjct: 227 G 227
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 82
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMAGFVA 180
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 91
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLAR---------------------HTDDEMTGYVA 189
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 92
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 190
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 82
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 180
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 23/230 (10%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
D + + I G++G+V+ E KI+ ++ + E IM +P
Sbjct: 38 DLNIKEKIGAGSFGTVH---RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPA--DMARFYFAETVL-AVEYLH 481
+V + +L +V EY+ G LL +G + R A V + YLH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 482 SYG--IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
+ IVHRDLK NLL+ +K+ DFGLS++ + + K
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL---------------KASXFLXSKXA 199
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFA 589
GTPE++APEV+ + + D +S GVIL+E P+ P ++ A
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA 249
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ-KLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 88
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 186
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 109
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 168
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMXGYVA 207
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 248
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 40/241 (16%)
Query: 357 FSKTPNENDFTVIKL------ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ--M 408
+S ++ FTV+K I +GA G V + A+KK+ S +NQ
Sbjct: 4 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL---SRPFQNQTHA 60
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHL------CLVMEYVEGGDCASLLKNTGPLP 462
++ + E +M ++ ++++ F +K L LVME ++ L +
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQME 115
Query: 463 ADMAR--FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLAT 520
D R + + + +++LHS GI+HRDLKP N+++ + +K+ DFGL++ S
Sbjct: 116 LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM 175
Query: 521 NLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFF 580
Y T Y APEVIL GY + VD WS+G I+ E + + F
Sbjct: 176 TPYVV----------------TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219
Query: 581 G 581
G
Sbjct: 220 G 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 91
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 189
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 85
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 86 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 144
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 145 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 183
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 224
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 97
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 156
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 157 IIHRDLKPSNLAVNEDXELKILDFGLAR---------------------HTDDEMTGYVA 195
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 93
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 191
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGXVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 98
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 196
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 98
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 196
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 92
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 190
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 88
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 186
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 88
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 186
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 97
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 156
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 157 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 195
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 105
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 164
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 203
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 83
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 142
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 181
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 222
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 106
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 204
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 83
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 142
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 181
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 82
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 180
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 109
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 168
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 207
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 248
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 91
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 189
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 84
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 85 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 143
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DFGL++ +D ++ G
Sbjct: 144 IIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDEMTGYVA 182
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 223
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 93
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP NL + +K+ DFGL++ + YV T
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARH-----TADEMTGYV-------------ATRW 194
Query: 545 YIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 93
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP NL + +K+ DFGL++ + YV T
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARH-----TADEMTGYV-------------ATRW 194
Query: 545 YIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 38/225 (16%)
Query: 369 IKLISNGAYGSVYLVRHKETRQRFAMKKI---IKNSLMLRNQMEQV-----FAERDIMSF 420
++ + +GAYGSV RQ+ A+KK+ ++ + R ++ +++
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
D V T S E + LV + G D +++K L + +F + + ++Y+
Sbjct: 93 LD---VFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYI 147
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
HS GI+HRDLKP N+ + +++ DFGL++ +D+++
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDSELRILDFGLARQ---------------------ADEEMT 186
Query: 541 G---TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
G T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 93
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPE 544
I+HRDLKP NL + +K+ DFGL++ + YV T
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARH-----TADEMTGYV-------------ATRW 194
Query: 545 YIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 34/241 (14%)
Query: 405 RNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEG-GDCASLLKNTGPLPA 463
R ME V ++ F+ V+ + FE L++E E D + G L
Sbjct: 100 RVPMEVVLLKKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE 156
Query: 464 DMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNL 522
++AR +F + + AV + H+ G++HRD+K +N+LI G +KL DFG + L +
Sbjct: 157 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTV 212
Query: 523 YECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGE 582
Y F +VY PE+I + +G+ WS+G++LY+ + G +PF E
Sbjct: 213 Y--------TDFDGTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVCGDIPF--E 258
Query: 583 TPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSN 642
EE+ V + E + +I L P DR E++ HP+ +
Sbjct: 259 HDEEIIRGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTF---EEIQNHPWMQD 307
Query: 643 L 643
+
Sbjct: 308 V 308
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ D+GL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDYGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 38/225 (16%)
Query: 369 IKLISNGAYGSVYLVRHKETRQRFAMKKI---IKNSLMLRNQMEQV-----FAERDIMSF 420
++ + +GAYGSV RQ+ A+KK+ ++ + R ++ +++
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
D V T S E + LV + G D +++K L + +F + + ++Y+
Sbjct: 85 LD---VFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYI 139
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
HS GI+HRDLKP N+ + +++ DFGL++ +D+++
Sbjct: 140 HSAGIIHRDLKPSNVAVNEDCELRILDFGLARQ---------------------ADEEMT 178
Query: 541 G---TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
G T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 223
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 21/229 (9%)
Query: 354 KDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
KDK+ N D + + I G +G V+ R + A+K + + +
Sbjct: 106 KDKW--VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQ 161
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP-LPADMARFYFAE 472
E I+ +P +V + K+ + +VME V+GGD + L+ G L +
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGD 221
Query: 473 TVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
+EYL S +HRDL N L+T +K++DFG+S+ E D
Sbjct: 222 AAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSRE--------------EADGV 267
Query: 533 QFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPF 579
+ + P ++ APE + Y D WS G++L+E F +G P+
Sbjct: 268 XAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 30/272 (11%)
Query: 364 NDFTVIKL---ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
ND +K I G++ +VY ET A ++ ++ + +++ ++ E + +
Sbjct: 23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCEL-QDRKLTKSERQRFKEEAEXLKG 81
Query: 421 TDNPFVVTMYCSFET----KKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA 476
+P +V Y S+E+ KK + LV E G + LK + R + + +
Sbjct: 82 LQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKG 141
Query: 477 VEYLHSYG--IVHRDLKPDNLLITA-LGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
+++LH+ I+HRDLK DN+ IT G +K+ D GL+ + S A
Sbjct: 142 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA-------------- 187
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVN 593
K V GTPE+ APE + Y + VD ++ G E P+ V
Sbjct: 188 ---KAVIGTPEFXAPEX-YEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVT 243
Query: 594 DDIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
++ S D I E K II ++QN +R
Sbjct: 244 SGVKPASFDKVAIP-EVKEIIEGCIRQNKDER 274
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 30/225 (13%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+ TV + I +G++G+VY K K++ + Q++ E ++ T
Sbjct: 11 DGQITVGQRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 66
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDC-----ASLLKNTGPLPADMARFYFAETVLAV 477
+ ++ ++ + TK L +V ++ EG AS K D+AR +T +
Sbjct: 67 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR----QTARGM 121
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
+YLH+ I+HRDLK +N+ + +K+ DFGL+ + ++ +E
Sbjct: 122 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE------------- 168
Query: 538 QVYGTPEYIAPEVILRQG---YGKPVDWWSMGVILYEFLVGCVPF 579
Q+ G+ ++APEVI Q Y D ++ G++LYE + G +P+
Sbjct: 169 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 22/221 (9%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E I + G +GSV L R+ T A+K++ + +Q E I+
Sbjct: 9 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQIL 65
Query: 419 SFTDNPFVVTMY-CSFE-TKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAETVL 475
+ F+V S+ ++ L LVMEY+ G L ++ L A Y ++
Sbjct: 66 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 125
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S VHRDL N+L+ + H+K+ DFGL+K L+ L + YV R+ Q
Sbjct: 126 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAK--LLPLDKDY---YVVREPGQ-- 178
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGC 576
+ PE ++ + RQ D WS GV+LYE C
Sbjct: 179 SPIFWYAPESLSDNIFSRQS-----DVWSFGVVLYELFTYC 214
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E I + G +GSV L R+ T A+K++ + +Q E I+
Sbjct: 10 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQIL 66
Query: 419 SFTDNPFVVTM--YCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAETVL 475
+ F+V ++ L LVMEY+ G L ++ L A Y ++
Sbjct: 67 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 126
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S VHRDL N+L+ + H+K+ DFGL+K L+ L + YV R+ Q
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAK--LLPLDKDY---YVVREPGQ-- 179
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGC 576
+ PE ++ + RQ D WS GV+LYE C
Sbjct: 180 SPIFWYAPESLSDNIFSRQS-----DVWSFGVVLYELFTYC 215
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 21/229 (9%)
Query: 354 KDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
KDK+ N D + + I G +G V+ R + A+K + + +
Sbjct: 106 KDKW--VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQ 161
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP-LPADMARFYFAE 472
E I+ +P +V + K+ + +VME V+GGD + L+ G L +
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGD 221
Query: 473 TVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
+EYL S +HRDL N L+T +K++DFG+S+ E D
Sbjct: 222 AAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSRE--------------EADGV 267
Query: 533 QFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPF 579
+ + P ++ APE + Y D WS G++L+E F +G P+
Sbjct: 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 22/221 (9%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E I + G +GSV L R+ T A+K++ + +Q E I+
Sbjct: 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQIL 78
Query: 419 SFTDNPFVVTMY-CSFE-TKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAETVL 475
+ F+V S+ ++ L LVMEY+ G L ++ L A Y ++
Sbjct: 79 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 138
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S VHRDL N+L+ + H+K+ DFGL+K L+ L + YV R+ Q
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAK--LLPLDKDY---YVVREPGQ-- 191
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGC 576
+ PE ++ + RQ D WS GV+LYE C
Sbjct: 192 SPIFWYAPESLSDNIFSRQS-----DVWSFGVVLYELFTYC 227
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ DF L++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFYLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 133/318 (41%), Gaps = 66/318 (20%)
Query: 355 DKFSKTPNE------NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI----------- 397
DK S + NE ++++K I +G V+ V + E +Q +A+K +
Sbjct: 41 DKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLD 99
Query: 398 -IKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK 456
+N + N+++Q +D ++ +Y T +++ +VME D S LK
Sbjct: 100 SYRNEIAYLNKLQQ---------HSDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLK 147
Query: 457 NTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLM 516
+ + Y+ + AV +H +GIVH DLKP N LI G +KL DFG++
Sbjct: 148 KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ--- 203
Query: 517 SLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKP-----------VDWWSM 565
++ D GT Y+ PE I + D WS+
Sbjct: 204 ----------MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 566 GVILYEFLVGCVPFFGETPEELFAHTV---NDDIEWPSEDDWPIQVEAKSIITDLLQQNP 622
G ILY G PF + H + N +IE+P D P + + + ++ L+++P
Sbjct: 254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP---DIP-EKDLQDVLKCCLKRDP 309
Query: 623 RDRLGTGGPHEVKEHPYF 640
+ R+ E+ HPY
Sbjct: 310 KQRISIP---ELLAHPYV 324
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 30/225 (13%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+ TV + I +G++G+VY K K++ + Q++ E ++ T
Sbjct: 23 DGQITVGQRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDC-----ASLLKNTGPLPADMARFYFAETVLAV 477
+ ++ ++ + TK L +V ++ EG AS K D+AR +T +
Sbjct: 79 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR----QTARGM 133
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
+YLH+ I+HRDLK +N+ + +K+ DFGL+ E + QF +
Sbjct: 134 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT-----------EKSRWSGSHQF--E 180
Query: 538 QVYGTPEYIAPEVILRQG---YGKPVDWWSMGVILYEFLVGCVPF 579
Q+ G+ ++APEVI Q Y D ++ G++LYE + G +P+
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ FGL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILGFGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 13/223 (5%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKN----SLMLRNQMEQVFAERDIMSFT 421
+ ++ + GA+G V + R KI+KN R+++ QV +
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI-QVLEHLNTTDPN 74
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLP--ADMARFYFAETVLAVEY 479
V M FE H+C+V E + G +K G LP D R + +V +
Sbjct: 75 STFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNF 133
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ- 538
LHS + H DLKP+N+L + + + + + + ++ V+ + + D+
Sbjct: 134 LHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIK--VVDFGSATYDDEHH 191
Query: 539 --VYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
+ T Y APEVIL G+ +P D WS+G IL E+ +G F
Sbjct: 192 STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ D GL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDAGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 133/318 (41%), Gaps = 66/318 (20%)
Query: 355 DKFSKTPNE------NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI----------- 397
DK S + NE ++++K I +G V+ V + E +Q +A+K +
Sbjct: 41 DKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLD 99
Query: 398 -IKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK 456
+N + N+++Q +D ++ +Y T +++ +VME D S LK
Sbjct: 100 SYRNEIAYLNKLQQ---------HSDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLK 147
Query: 457 NTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLM 516
+ + Y+ + AV +H +GIVH DLKP N LI G +KL DFG++
Sbjct: 148 KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ--- 203
Query: 517 SLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKP-----------VDWWSM 565
++ D GT Y+ PE I + D WS+
Sbjct: 204 ----------MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 566 GVILYEFLVGCVPFFGETPEELFAHTV---NDDIEWPSEDDWPIQVEAKSIITDLLQQNP 622
G ILY G PF + H + N +IE+P D P + + + ++ L+++P
Sbjct: 254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP---DIP-EKDLQDVLKCCLKRDP 309
Query: 623 RDRLGTGGPHEVKEHPYF 640
+ R+ E+ HPY
Sbjct: 310 KQRISIP---ELLAHPYV 324
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 124/287 (43%), Gaps = 40/287 (13%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS-F 420
E V ++++ G + VY + + + +A+K+++ N + + E M
Sbjct: 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE---EEKNRAIIQEVCFMKKL 82
Query: 421 TDNPFVVTMYCSF--------ETKKHLCLVMEYVEGGDCASLLK---NTGPLPADMARFY 469
+ +P +V +CS +T + L++ + G LK + GPL D
Sbjct: 83 SGHPNIV-QFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKI 141
Query: 470 FAETVLAVEYLHSYG--IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNL----- 522
F +T AV+++H I+HRDLK +NLL++ G IKL DFG AT +
Sbjct: 142 FYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG--------SATTISHYPD 193
Query: 523 YECYVERDAKQFSDKQVYGTPEYIAPEVI-LRQGY--GKPVDWWSMGVILYEFLVGCVPF 579
Y +R A + TP Y PE+I L + G+ D W++G ILY PF
Sbjct: 194 YSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF 253
Query: 580 FGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRL 626
E +L VN P D S+I +LQ NP +RL
Sbjct: 254 --EDGAKL--RIVNGKYSIPPHDTQYTVFH--SLIRAMLQVNPEERL 294
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ D GL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDRGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ +GAYGSV +T R A+KK+ + S++ ++ + E ++ + V+ +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYRELRLLKHMKHENVIGL 86
Query: 430 YCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
F + L ++ ++ G D +++K L D +F + + ++Y+HS
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG--- 541
I+HRDLKP NL + +K+ D GL++ +D ++ G
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDGGLAR---------------------HTDDEMTGYVA 184
Query: 542 TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
T Y APE++L Y + VD WS+G I+ E L G F G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 49/228 (21%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK------------NSLMLRNQMEQVFAERDIMS 419
+ +GAYGSV K + ++ A+KK+ + L+L M+ +++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH----ENVIG 87
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG-PLPADMARFYFAETVLAVE 478
D V T S LVM +++ L K G + ++ + + ++
Sbjct: 88 LLD---VFTPASSLRNFYDFYLVMPFMQ----TDLQKIMGLKFSEEKIQYLVYQMLKGLK 140
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS G+VHRDLKP NL + +K+ DFGL++ +D +
Sbjct: 141 YIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR---------------------HADAE 179
Query: 539 VYG---TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGE 582
+ G T Y APEVIL Y + VD WS+G I+ E L G F G+
Sbjct: 180 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 49/228 (21%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIK------------NSLMLRNQMEQVFAERDIMS 419
+ +GAYGSV K + ++ A+KK+ + L+L M+ +++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH----ENVIG 105
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG-PLPADMARFYFAETVLAVE 478
D V T S LVM +++ L K G + ++ + + ++
Sbjct: 106 LLD---VFTPASSLRNFYDFYLVMPFMQ----TDLQKIMGMEFSEEKIQYLVYQMLKGLK 158
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS G+VHRDLKP NL + +K+ DFGL++ +D +
Sbjct: 159 YIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR---------------------HADAE 197
Query: 539 VYG---TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGE 582
+ G T Y APEVIL Y + VD WS+G I+ E L G F G+
Sbjct: 198 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 40/311 (12%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI-IKNSLMLRNQMEQVFAERDIMSFTDN 423
DF I+ + G +G V+ ++K +A+K+I + N + R E+V E ++ ++
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR---EKVMREVKALAKLEH 62
Query: 424 PFVVTMYCSF------------ETKKHLCLVMEYVEGGDCASLLKNTGPLPA---DMARF 468
P +V + ++ K +L + M+ + + + +
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
F + AVE+LHS G++HRDLKP N+ T +K+ DFGL + M
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL--VTAMDQDEEEQTVLTP 180
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELF 588
A QV GT Y++PE I Y VD +S+G+IL+E L PF + E +
Sbjct: 181 MPAYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQM-ERVR 235
Query: 589 AHTVNDDIEWPS--EDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVK--EHPYFSNLD 644
T ++++P +P + ++ D+L +P +R P + E+ F +LD
Sbjct: 236 TLTDVRNLKFPPLFTQKYPCEY---VMVQDMLSPSPMER-----PEAINIIENAVFEDLD 287
Query: 645 W--NSLLRHKA 653
+ ++LR ++
Sbjct: 288 FPGKTVLRQRS 298
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 127/300 (42%), Gaps = 60/300 (20%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI------------IKNSLMLRNQMEQVFA 413
++++K I +G V+ V + E +Q +A+K + +N + N+++Q
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ--- 66
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
+D ++ +Y T +++ +VME D S LK + + Y+
Sbjct: 67 ------HSDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNM 117
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
+ AV +H +GIVH DLKP N LI G +KL DFG++ ++ D
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ-------------MQPDTTS 163
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKP-----------VDWWSMGVILYEFLVGCVPFFGE 582
GT Y+ PE I + D WS+G ILY G PF
Sbjct: 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 223
Query: 583 TPEELFAHTV---NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
+ H + N +IE+P D P + + + ++ L+++P+ R+ E+ HPY
Sbjct: 224 INQISKLHAIIDPNHEIEFP---DIP-EKDLQDVLKCCLKRDPKQRISIP---ELLAHPY 276
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 50/278 (17%)
Query: 348 DSYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIK-------- 399
+ Y +KDK+ ND+ +I+ ++ G + + L ++ + +A+KK K
Sbjct: 20 NKYVKEKDKYI-----NDYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRD 72
Query: 400 ------NSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCAS 453
+ + ++++ + E I++ N + +T + ++ EY+E
Sbjct: 73 FTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILK 132
Query: 454 -------LLKN-TGPLPADMARFYFAETVLAVEYLHS-YGIVHRDLKPDNLLITALGHIK 504
L KN T +P + + + + Y+H+ I HRD+KP N+L+ G +K
Sbjct: 133 FDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVK 192
Query: 505 LTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGY--GKPVDW 562
L+DFG S E V++ K GT E++ PE + G VD
Sbjct: 193 LSDFGES------------EYMVDKKIKGSR-----GTYEFMPPEFFSNESSYNGAKVDI 235
Query: 563 WSMGVILYEFLVGCVPF-FGETPEELFAHTVNDDIEWP 599
WS+G+ LY VPF + ELF + +IE+P
Sbjct: 236 WSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYP 273
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 22/256 (8%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQR---FAMKKIIKNSLMLRNQMEQVF 412
+F+K + T+ ++I G +G V R K +R A+K + Q
Sbjct: 14 EFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTL--KVGYTEKQRRDFL 71
Query: 413 AERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK-NTGPLPADMARFYFA 471
E IM D+P ++ + K + +V EY+E G + LK N G
Sbjct: 72 GEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR 131
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
++YL G VHRDL N+LI + K++DFGLS++ L + Y R
Sbjct: 132 GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV----LEDDPEAAYTTRGG 187
Query: 532 KQFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFL-VGCVPFFGETPEELFA 589
K P + APE I + + D WS G++++E + G P++ T +++
Sbjct: 188 K---------IPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI- 237
Query: 590 HTVNDDIEWPSEDDWP 605
V + PS D P
Sbjct: 238 KAVEEGYRLPSPMDCP 253
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 127/300 (42%), Gaps = 60/300 (20%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI------------IKNSLMLRNQMEQVFA 413
++++K I +G V+ V + E +Q +A+K + +N + N+++Q
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ--- 85
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
+D ++ +Y T +++ +VME D S LK + + Y+
Sbjct: 86 ------HSDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNM 136
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
+ AV +H +GIVH DLKP N LI G +KL DFG++ ++ D
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ-------------MQPDTTS 182
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKP-----------VDWWSMGVILYEFLVGCVPFFGE 582
GT Y+ PE I + D WS+G ILY G PF
Sbjct: 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242
Query: 583 TPEELFAHTV---NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
+ H + N +IE+P D P + + + ++ L+++P+ R+ E+ HPY
Sbjct: 243 INQISKLHAIIDPNHEIEFP---DIP-EKDLQDVLKCCLKRDPKQRISIP---ELLAHPY 295
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 30/225 (13%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+ TV + I +G++G+VY K K++ + Q++ E ++ T
Sbjct: 23 DGQITVGQRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDC-----ASLLKNTGPLPADMARFYFAETVLAV 477
+ ++ ++ + T L +V ++ EG AS K D+AR +T +
Sbjct: 79 HVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR----QTARGM 133
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
+YLH+ I+HRDLK +N+ + +K+ DFGL+ E + QF +
Sbjct: 134 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT-----------EKSRWSGSHQF--E 180
Query: 538 QVYGTPEYIAPEVILRQG---YGKPVDWWSMGVILYEFLVGCVPF 579
Q+ G+ ++APEVI Q Y D ++ G++LYE + G +P+
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 127/301 (42%), Gaps = 60/301 (19%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI------------IKNSLMLRNQMEQVFA 413
++++K I +G V+ V + E +Q +A+K + +N + N+++Q
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ--- 69
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
+D ++ +Y T +++ +VME D S LK + + Y+
Sbjct: 70 ------HSDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNM 120
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
+ AV +H +GIVH DLKP N LI G +KL DFG++ ++ D
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ-------------MQPDTTS 166
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKP-----------VDWWSMGVILYEFLVGCVPFFGE 582
GT Y+ PE I + D WS+G ILY G PF
Sbjct: 167 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 226
Query: 583 TPEELFAHTV---NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
+ H + N +IE+P D P + + + ++ L+++P+ R+ E+ HPY
Sbjct: 227 INQISKLHAIIDPNHEIEFP---DIP-EKDLQDVLKCCLKRDPKQRISIP---ELLAHPY 279
Query: 640 F 640
Sbjct: 280 V 280
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 132/318 (41%), Gaps = 66/318 (20%)
Query: 355 DKFSKTPNE------NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI----------- 397
DK S + NE ++++K I +G V+ V + E +Q +A+K +
Sbjct: 41 DKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLD 99
Query: 398 -IKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK 456
+N + N+++Q +D ++ +Y T +++ +VME D S LK
Sbjct: 100 SYRNEIAYLNKLQQ---------HSDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLK 147
Query: 457 NTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLM 516
+ + Y+ + AV +H +GIVH DLKP N LI G +KL DFG++
Sbjct: 148 KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ--- 203
Query: 517 SLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKP-----------VDWWSM 565
++ D G Y+ PE I + D WS+
Sbjct: 204 ----------MQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 566 GVILYEFLVGCVPFFGETPEELFAHTV---NDDIEWPSEDDWPIQVEAKSIITDLLQQNP 622
G ILY G PF + H + N +IE+P D P + + + ++ L+++P
Sbjct: 254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP---DIP-EKDLQDVLKCCLKRDP 309
Query: 623 RDRLGTGGPHEVKEHPYF 640
+ R+ E+ HPY
Sbjct: 310 KQRISIP---ELLAHPYV 324
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 105/263 (39%), Gaps = 45/263 (17%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKET--RQRFAMKKIIKNSLMLRNQMEQVFA-ERDIMSF 420
N+ ++ I GA+G V+ R + F M + M+ F E +M+
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT---------------------- 458
DNP +V + K +CL+ EY+ GD L++
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 459 GPLPADMA-RFYFAETVLA-VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLM 516
GP P A + A V A + YL VHRDL N L+ +K+ DFGLS+
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR---- 222
Query: 517 SLATNLYEC-YVERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYE-FL 573
N+Y Y + D P ++ PE I Y D W+ GV+L+E F
Sbjct: 223 ----NIYSADYYKADGND-------AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
Query: 574 VGCVPFFGETPEELFAHTVNDDI 596
G P++G EE+ + + +I
Sbjct: 272 YGLQPYYGMAHEEVIYYVRDGNI 294
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 127/300 (42%), Gaps = 60/300 (20%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI------------IKNSLMLRNQMEQVFA 413
++++K I +G V+ V + E +Q +A+K + +N + N+++Q
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ--- 85
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
+D ++ +Y T +++ +VME D S LK + + Y+
Sbjct: 86 ------HSDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNM 136
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
+ AV +H +GIVH DLKP N LI G +KL DFG++ ++ D
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ-------------MQPDXXX 182
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKP-----------VDWWSMGVILYEFLVGCVPFFGE 582
GT Y+ PE I + D WS+G ILY G PF
Sbjct: 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242
Query: 583 TPEELFAHTV---NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
+ H + N +IE+P D P + + + ++ L+++P+ R+ E+ HPY
Sbjct: 243 INQISKLHAIIDPNHEIEFP---DIP-EKDLQDVLKCCLKRDPKQRISIP---ELLAHPY 295
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 29/225 (12%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP- 424
+ + LI G++G V + + Q + KIIKN NQ + ++M+ D
Sbjct: 37 YEIDSLIGKGSFGQV-VKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 95
Query: 425 --FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLAVEYL 480
++V + F + HLCLV E + + LL+NT + ++ R + + A+ +L
Sbjct: 96 KYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 154
Query: 481 HS--YGIVHRDLKPDNLLIT--ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ I+H DLKP+N+L+ IK+ DFG S L +Y+ R
Sbjct: 155 ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS----CQLGQRIYQXIQSR------- 203
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y +PEV+L Y +D WS+G IL E G F G
Sbjct: 204 -------FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 241
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 101/239 (42%), Gaps = 45/239 (18%)
Query: 366 FTVIKLISNGAYGSVY-LVRHKETRQRFAMKKIIKN----SLMLRNQMEQVFAERDIMSF 420
+ ++ + GA+G V + HK + A+K I+KN R+++ QV +
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVK-IVKNVDRYCEAARSEI-QVLEHLNTTDP 73
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLP--ADMARFYFAETVLAVE 478
V M FE H+C+V E + G +K G LP D R + +V
Sbjct: 74 NSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
+LHS + H DLKP+N+L +D+ T Y ++RD + +
Sbjct: 133 FLHSNKLTHTDLKPENILFVQ------SDY-----------TEAYNPKIKRDERTLINPD 175
Query: 539 V----YGTP--------------EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPF 579
+ +G+ Y APEVIL G+ +P D WS+G IL E+ +G F
Sbjct: 176 IKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 36/227 (15%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIK--NSLMLRNQMEQVFAERDIMSFTDN 423
+ + + +GAYGSV ++ + A+KK+ + S++ ++ + E ++ +
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSII---HAKRTYRELRLLKHMKH 109
Query: 424 PFVVTMYCSFETKKHL-----CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVE 478
V+ + F L ++ ++ G D +++K L D +F + + ++
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLK 168
Query: 479 YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQ 538
Y+HS I+HRDLKP NL + +K+ DFGL++ +D +
Sbjct: 169 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---------------------HTDDE 207
Query: 539 VYG---TPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG 581
+ G T Y APE++L Y VD WS+G I+ E L G F G
Sbjct: 208 MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPG 254
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 127/301 (42%), Gaps = 60/301 (19%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKI------------IKNSLMLRNQMEQVFA 413
++++K I +G V+ V + E +Q +A+K + +N + N+++Q
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ--- 65
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
+D ++ +Y T +++ +VME D S LK + + Y+
Sbjct: 66 ------HSDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNM 116
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
+ AV +H +GIVH DLKP N LI G +KL DFG++ ++ D
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ-------------MQPDTTS 162
Query: 534 FSDKQVYGTPEYIAPEVILRQGYGKP-----------VDWWSMGVILYEFLVGCVPFFGE 582
GT Y+ PE I + D WS+G ILY G PF
Sbjct: 163 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 222
Query: 583 TPEELFAHTV---NDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPY 639
+ H + N +IE+P D P + + + ++ L+++P+ R+ E+ HPY
Sbjct: 223 INQISKLHAIIDPNHEIEFP---DIP-EKDLQDVLKCCLKRDPKQRISIP---ELLAHPY 275
Query: 640 F 640
Sbjct: 276 V 276
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 32/233 (13%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME--QVFAERDIMSFT 421
+++ + LI G+YG VYL K + A+KK+ + M + ++ ++ E I++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKV---NRMFEDLIDCKRILREITILNRL 84
Query: 422 DNPFVVTMY--------CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
+ +++ ++ F+ L +V+E + D L K L +
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFD---ELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNL 140
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKM----GLMSLATNLYEC---- 525
+L +++H GI+HRDLKP N L+ +K+ DFGL++ + + +L E
Sbjct: 141 LLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 526 ----YVERDAKQFSDKQVYGTPEYIAPEVILRQ-GYGKPVDWWSMGVILYEFL 573
+ + KQ + V T Y APE+IL Q Y +D WS G I E L
Sbjct: 201 EPGPHNKNLKKQLTSHVV--TRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 29/225 (12%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP- 424
+ + LI G++G V + + Q + KIIKN NQ + ++M+ D
Sbjct: 56 YEIDSLIGKGSFGQV-VKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 425 --FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLAVEYL 480
++V + F + HLCLV E + + LL+NT + ++ R + + A+ +L
Sbjct: 115 KYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 481 HS--YGIVHRDLKPDNLLIT--ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ I+H DLKP+N+L+ IK+ DFG S L +Y+ R
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS----CQLGQRIYQXIQSR------- 222
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y +PEV+L Y +D WS+G IL E G F G
Sbjct: 223 -------FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 22/221 (9%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E I + G +GSV L R+ T A+K++ + +Q E I+
Sbjct: 6 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQIL 62
Query: 419 SFTDNPFVVTM--YCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAETVL 475
+ F+V + L LVMEY+ G L ++ L A Y ++
Sbjct: 63 KALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 122
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S VHRDL N+L+ + H+K+ DFGL+K L+ L + V R+ Q
Sbjct: 123 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAK--LLPLDKDX---XVVREPGQ-- 175
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGC 576
+ PE ++ + RQ D WS GV+LYE C
Sbjct: 176 SPIFWYAPESLSDNIFSRQS-----DVWSFGVVLYELFTYC 211
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 29/225 (12%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP- 424
+ + LI G++G V + + Q + KIIKN NQ + ++M+ D
Sbjct: 56 YEIDSLIGKGSFGQV-VKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 425 --FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLAVEYL 480
++V + F + HLCLV E + + LL+NT + ++ R + + A+ +L
Sbjct: 115 KYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 481 HS--YGIVHRDLKPDNLLIT--ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ I+H DLKP+N+L+ IK+ DFG S L +Y+ R
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSS----CQLGQRIYQXIQSR------- 222
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFG 581
Y +PEV+L Y +D WS+G IL E G F G
Sbjct: 223 -------FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 18/196 (9%)
Query: 397 IIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK 456
I+KN +++ AE ++M DNP++V M E + + LVME E G L+
Sbjct: 403 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ 461
Query: 457 NTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLM 516
+ + + ++YL VHRDL N+L+ + K++DFGLSK
Sbjct: 462 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK---- 517
Query: 517 SLATNLYECYVERDAKQFSDKQVYGT--PEYIAPEVILRQGYGKPVDWWSMGVILYE-FL 573
R + + Q +G ++ APE I + D WS GV+++E F
Sbjct: 518 ----------ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
Query: 574 VGCVPFFGETPEELFA 589
G P+ G E+ A
Sbjct: 568 YGQKPYRGMKGSEVTA 583
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 18/196 (9%)
Query: 397 IIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK 456
I+KN +++ AE ++M DNP++V M E + + LVME E G L+
Sbjct: 404 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ 462
Query: 457 NTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLM 516
+ + + ++YL VHRDL N+L+ + K++DFGLSK
Sbjct: 463 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK---- 518
Query: 517 SLATNLYECYVERDAKQFSDKQVYGT--PEYIAPEVILRQGYGKPVDWWSMGVILYE-FL 573
R + + Q +G ++ APE I + D WS GV+++E F
Sbjct: 519 ----------ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
Query: 574 VGCVPFFGETPEELFA 589
G P+ G E+ A
Sbjct: 569 YGQKPYRGMKGSEVTA 584
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 30/225 (13%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+ TV + I +G++G+VY K K++ + Q++ E ++ T
Sbjct: 34 DGQITVGQRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 89
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-----KNTGPLPADMARFYFAETVLAV 477
+ ++ ++ + TK L +V ++ EG L K D+AR +T +
Sbjct: 90 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR----QTAQGM 144
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
+YLH+ I+HRDLK +N+ + +K+ DFGL+ + ++ +E
Sbjct: 145 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE------------- 191
Query: 538 QVYGTPEYIAPEVILRQG---YGKPVDWWSMGVILYEFLVGCVPF 579
Q+ G+ ++APEVI Q Y D ++ G++LYE + G +P+
Sbjct: 192 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 21/232 (9%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHK-ETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
+F+K + + ++ K++ G +G V R K +++ ++ Q E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAET 473
IM D+P ++ + K + +V EY+E G S L K+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
++YL G VHRDL N+LI + K++DFGLS++ L + Y R K
Sbjct: 157 ASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRV----LEDDPEAAYTTRGGK- 211
Query: 534 FSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
P + +PE I + + D WS G++L+E + +GE P
Sbjct: 212 --------IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERP 250
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 62/315 (19%)
Query: 369 IKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVT 428
+K + G G V+ + +R A+KKI+ L ++ E I+ D+ +V
Sbjct: 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIV---LTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 429 MY--------------CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETV 474
++ S + +V EY+E D A++L+ GPL + AR + + +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQ-GPLLEEHARLFMYQLL 130
Query: 475 LAVEYLHSYGIVHRDLKPDNLLITALGHI-KLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
++Y+HS ++HRDLKP NL I + K+ DFGL+++ + Y +
Sbjct: 131 RGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARI--------MDPHYSHK--GH 180
Query: 534 FSDKQVYGTPEYIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFG----------- 581
S+ V T Y +P ++L Y K +D W+ G I E L G F G
Sbjct: 181 LSEGLV--TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238
Query: 582 --------ETPEELFA----HTVNDDIE--WPSEDDWP-IQVEAKSIITDLLQQNPRDRL 626
E +EL + + ND E P P I EA + +L +P DRL
Sbjct: 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRL 298
Query: 627 GTGGPHEVKEHPYFS 641
E HPY S
Sbjct: 299 TA---EEALSHPYMS 310
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E + +K++ +GA+G+VY + + + A+K + +N+ N+ ++ E +
Sbjct: 15 KETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK--EILDEAYV 72
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ +P+V + C T + + +M Y G + +N G L + + +
Sbjct: 73 MAGVGSPYVSRLLGICLTSTVQLVTQLMPY--GCLLDHVRENRGRLGSQDLLNWCMQIAK 130
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ + H+K+TDFGL+++ ++ E D +
Sbjct: 131 GMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARL------LDIDETEYHADGGKVP 184
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
K ++A E ILR+ + D WS GV ++E + G P+ G E+
Sbjct: 185 IK-------WMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI 230
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 30/225 (13%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+ TV + I +G++G+VY K K++ + Q++ E ++ T
Sbjct: 35 DGQITVGQRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 90
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-----KNTGPLPADMARFYFAETVLAV 477
+ ++ ++ + TK L +V ++ EG L K D+AR +T +
Sbjct: 91 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR----QTAQGM 145
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
+YLH+ I+HRDLK +N+ + +K+ DFGL+ + ++ +E
Sbjct: 146 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE------------- 192
Query: 538 QVYGTPEYIAPEVILRQG---YGKPVDWWSMGVILYEFLVGCVPF 579
Q+ G+ ++APEVI Q Y D ++ G++LYE + G +P+
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 134/294 (45%), Gaps = 53/294 (18%)
Query: 371 LISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY 430
++ +GA G++ + R + A+K+I+ ++ Q+ E D ++P V+ +
Sbjct: 31 VLGHGAEGTI-VYRGMFDNRDVAVKRILPECFSFADREVQLLRESD-----EHPNVIRYF 84
Query: 431 CSFETKK------HLCL--VMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHS 482
C+ + ++ LC + EYVE D A L G P + +T + +LHS
Sbjct: 85 CTEKDRQFQYIAIELCAATLQEYVEQKDFAHL----GLEPITL----LQQTTSGLAHLHS 136
Query: 483 YGIVHRDLKPDNLLIT---ALGHIK--LTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
IVHRDLKP N+LI+ A G IK ++DFGL K LA + FS +
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK----KLAVGRH---------SFSRR 183
Query: 538 Q-VYGTPEYIAPEVILRQGYGKP---VDWWSMGVILYEFLVGCVPFFGETPEE---LFAH 590
V GT +IAPE++ P VD +S G + Y + FG++ + +
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG 243
Query: 591 TVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYFSNLD 644
+ D P + + V A+ +I ++ +P+ R V +HP+F +L+
Sbjct: 244 ACSLDCLHPEKHE---DVIARELIEKMIAMDPQKRPSA---KHVLKHPFFWSLE 291
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 30/225 (13%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+ TV + I +G++G+VY K K++ + Q++ E ++ T
Sbjct: 9 DGQITVGQRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 64
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-----KNTGPLPADMARFYFAETVLAV 477
+ ++ ++ + TK L +V ++ EG L K D+AR +T +
Sbjct: 65 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR----QTAQGM 119
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
+YLH+ I+HRDLK +N+ + +K+ DFGL+ + ++ +E
Sbjct: 120 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE------------- 166
Query: 538 QVYGTPEYIAPEVILRQG---YGKPVDWWSMGVILYEFLVGCVPF 579
Q+ G+ ++APEVI Q Y D ++ G++LYE + G +P+
Sbjct: 167 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 30/225 (13%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+ TV + I +G++G+VY K K++ + Q++ E ++ T
Sbjct: 12 DGQITVGQRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-----KNTGPLPADMARFYFAETVLAV 477
+ ++ ++ + TK L +V ++ EG L K D+AR +T +
Sbjct: 68 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR----QTAQGM 122
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
+YLH+ I+HRDLK +N+ + +K+ DFGL+ + ++ +E
Sbjct: 123 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE------------- 169
Query: 538 QVYGTPEYIAPEVILRQG---YGKPVDWWSMGVILYEFLVGCVPF 579
Q+ G+ ++APEVI Q Y D ++ G++LYE + G +P+
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 21/232 (9%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHK-ETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
+F+K + + ++ K++ G +G V R K +++ ++ Q E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAET 473
IM D+P ++ + K + +V EY+E G S L K+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
++YL G VHRDL N+LI + K++DFGLS++ L + Y R K
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV----LEDDPEAAYTTRGGK- 211
Query: 534 FSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
P + +PE I + + D WS G++L+E + +GE P
Sbjct: 212 --------IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 21/232 (9%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHK-ETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
+F+K + + ++ K++ G +G V R K +++ ++ Q E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAET 473
IM D+P ++ + K + +V EY+E G S L K+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
++YL G VHRDL N+LI + K++DFGLS++ L + Y R K
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV----LEDDPEAAYTTRGGK- 211
Query: 534 FSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
P + +PE I + + D WS G++L+E + +GE P
Sbjct: 212 --------IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 21/232 (9%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHK-ETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
+F+K + + ++ K++ G +G V R K +++ ++ Q E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAET 473
IM D+P ++ + K + +V EY+E G S L K+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
++YL G VHRDL N+LI + K++DFGLS++ L + Y R K
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV----LEDDPEAAYTTRGGK- 211
Query: 534 FSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
P + +PE I + + D WS G++L+E + +GE P
Sbjct: 212 --------IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERP 250
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 30/225 (13%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+ TV + I +G++G+VY K K++ + Q++ E ++ T
Sbjct: 27 DGQITVGQRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 82
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-----KNTGPLPADMARFYFAETVLAV 477
+ ++ ++ + TK L +V ++ EG L K D+AR +T +
Sbjct: 83 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR----QTAQGM 137
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
+YLH+ I+HRDLK +N+ + +K+ DFGL+ E + QF +
Sbjct: 138 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-----------EKSRWSGSHQF--E 184
Query: 538 QVYGTPEYIAPEVILRQG---YGKPVDWWSMGVILYEFLVGCVPF 579
Q+ G+ ++APEVI Q Y D ++ G++LYE + G +P+
Sbjct: 185 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 30/225 (13%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+ TV + I +G++G+VY K K++ + Q++ E ++ T
Sbjct: 12 DGQITVGQRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-----KNTGPLPADMARFYFAETVLAV 477
+ ++ ++ + TK L +V ++ EG L K D+AR +T +
Sbjct: 68 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR----QTAQGM 122
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
+YLH+ I+HRDLK +N+ + +K+ DFGL+ + ++ +E
Sbjct: 123 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE------------- 169
Query: 538 QVYGTPEYIAPEVILRQG---YGKPVDWWSMGVILYEFLVGCVPF 579
Q+ G+ ++APEVI Q Y D ++ G++LYE + G +P+
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 33/238 (13%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHK-ETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
+F+K + + ++ K++ G +G V R K +++ ++ Q E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETV 474
IM D+P ++ + K + +V EY+E G S L+ A+F + V
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLV 150
Query: 475 -------LAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
++YL G VHRDL N+LI + K++DFGLS++ L + Y
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV----LEDDPEAAYT 206
Query: 528 ERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
R K P + +PE I + + D WS G++L+E + +GE P
Sbjct: 207 TRGGK---------IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 21/232 (9%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHK-ETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
+F+K + + ++ K++ G +G V R K +++ ++ Q E
Sbjct: 35 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 94
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAET 473
IM D+P ++ + K + +V EY+E G S L K+
Sbjct: 95 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 154
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
++YL G VHRDL N+LI + K++DFGLS++ L + Y R K
Sbjct: 155 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV----LEDDPEAAYTTRGGK- 209
Query: 534 FSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
P + +PE I + + D WS G++L+E + +GE P
Sbjct: 210 --------IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERP 248
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 30/225 (13%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+ TV + I +G++G+VY K K++ + Q++ E ++ T
Sbjct: 35 DGQITVGQRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 90
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-----KNTGPLPADMARFYFAETVLAV 477
+ ++ ++ + TK L +V ++ EG L K D+AR +T +
Sbjct: 91 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR----QTAQGM 145
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
+YLH+ I+HRDLK +N+ + +K+ DFGL+ E + QF +
Sbjct: 146 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-----------EKSRWSGSHQF--E 192
Query: 538 QVYGTPEYIAPEVILRQG---YGKPVDWWSMGVILYEFLVGCVPF 579
Q+ G+ ++APEVI Q Y D ++ G++LYE + G +P+
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 18/196 (9%)
Query: 397 IIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK 456
I+KN +++ AE ++M DNP++V M E + + LVME E G L+
Sbjct: 59 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ 117
Query: 457 NTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLM 516
+ + + ++YL VHRDL N+L+ + K++DFGLSK
Sbjct: 118 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK---- 173
Query: 517 SLATNLYECYVERDAKQFSDKQVYGT--PEYIAPEVILRQGYGKPVDWWSMGVILYE-FL 573
R + + Q +G ++ APE I + D WS GV+++E F
Sbjct: 174 ----------ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
Query: 574 VGCVPFFGETPEELFA 589
G P+ G E+ A
Sbjct: 224 YGQKPYRGMKGSEVTA 239
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 30/225 (13%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+ TV + I +G++G+VY K K++ + Q++ E ++ T
Sbjct: 7 DGQITVGQRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-----KNTGPLPADMARFYFAETVLAV 477
+ ++ ++ + TK L +V ++ EG L K D+AR +T +
Sbjct: 63 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR----QTAQGM 117
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
+YLH+ I+HRDLK +N+ + +K+ DFGL+ + ++ +E
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE------------- 164
Query: 538 QVYGTPEYIAPEVILRQG---YGKPVDWWSMGVILYEFLVGCVPF 579
Q+ G+ ++APEVI Q Y D ++ G++LYE + G +P+
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 20/226 (8%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+ + LI G+YG V K ++ A+KKI++ L + +++ E I++ ++
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLID-CKRILREIAILNRLNHDH 113
Query: 426 VVTMY-----CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYL 480
VV + E L +V+E + D L + L + ++ V+Y+
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKM------GLMSLATNLYE---CYVERDA 531
HS GI+HRDLKP N L+ +K+ DFGL++ G L + E V
Sbjct: 173 HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 532 KQFSDKQVYG---TPEYIAPEVILRQ-GYGKPVDWWSMGVILYEFL 573
+ +Q+ G T Y APE+IL Q Y + +D WS+G I E L
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 34/234 (14%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERD--- 416
T +N+ K I G +G V+ R + + A+K +I +M + F E
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 417 -IMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCA-SLLKNTGPLPADMARFYFAETV 474
IMS ++P +V +Y + VME+V GD LL P+ + +
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 475 LAVEYLHSYG--IVHRDLKPDNLLITALGH-----IKLTDFGLSKMGLMSLATNLYECYV 527
L +EY+ + IVHRDL+ N+ + +L K+ DFGLS+ + S++ L
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLL----- 187
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVIL--RQGYGKPVDWWSMGVILYEFLVGCVPF 579
G +++APE I + Y + D +S +ILY L G PF
Sbjct: 188 -------------GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 18/184 (9%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
+++ AE ++M DNP++V M E + + LVME E G L+ +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 131
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
+ + ++YL VHRDL N+L+ + K++DFGLSK
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK--------------AL 177
Query: 529 RDAKQFSDKQVYGT--PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPE 585
R + + Q +G ++ APE I + D WS GV+++E F G P+ G
Sbjct: 178 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 237
Query: 586 ELFA 589
E+ A
Sbjct: 238 EVTA 241
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 18/184 (9%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
+++ AE ++M DNP++V M E + + LVME E G L+ +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 131
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
+ + ++YL VHRDL N+L+ + K++DFGLSK
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK--------------AL 177
Query: 529 RDAKQFSDKQVYGT--PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPE 585
R + + Q +G ++ APE I + D WS GV+++E F G P+ G
Sbjct: 178 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 237
Query: 586 ELFA 589
E+ A
Sbjct: 238 EVTA 241
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 21/232 (9%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHK-ETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
+F+K + + ++ K++ G +G V R K +++ ++ Q E
Sbjct: 8 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAET 473
IM D+P ++ + K + +V EY+E G S L K+
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 127
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
++YL G VHRDL N+LI + K++DFGLS++ L + Y R K
Sbjct: 128 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV----LEDDPEAAYTTRGGK- 182
Query: 534 FSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
P + +PE I + + D WS G++L+E + +GE P
Sbjct: 183 --------IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERP 221
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 18/184 (9%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
+++ AE ++M DNP++V M E + + LVME E G L+ +
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 121
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
+ + ++YL VHRDL N+L+ + K++DFGLSK
Sbjct: 122 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK--------------AL 167
Query: 529 RDAKQFSDKQVYGT--PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPE 585
R + + Q +G ++ APE I + D WS GV+++E F G P+ G
Sbjct: 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 227
Query: 586 ELFA 589
E+ A
Sbjct: 228 EVTA 231
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
++ T ++ I +G +G V+L + + + A+K I + ++ E E ++M +
Sbjct: 7 SELTFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSH 61
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT-GPLPADMARFYFAETVLAVEYLHS 482
P +V +Y + +CLV E++E G + L+ G A+ + + YL
Sbjct: 62 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
++HRDL N L+ IK++DFG+++ L + Y +F K
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRF-------VLDDQYTSSTGTKFPVK----- 169
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPF 579
+ +PEV Y D WS GV+++E F G +P+
Sbjct: 170 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 18/184 (9%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
+++ AE ++M DNP++V M E + + LVME E G L+ +
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 109
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
+ + ++YL VHRDL N+L+ + K++DFGLSK
Sbjct: 110 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK--------------AL 155
Query: 529 RDAKQFSDKQVYGT--PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPE 585
R + + Q +G ++ APE I + D WS GV+++E F G P+ G
Sbjct: 156 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 215
Query: 586 ELFA 589
E+ A
Sbjct: 216 EVTA 219
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 18/184 (9%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
+++ AE ++M DNP++V M E + + LVME E G L+ +
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 111
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
+ + ++YL VHRDL N+L+ + K++DFGLSK
Sbjct: 112 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK--------------AL 157
Query: 529 RDAKQFSDKQVYGT--PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPE 585
R + + Q +G ++ APE I + D WS GV+++E F G P+ G
Sbjct: 158 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 217
Query: 586 ELFA 589
E+ A
Sbjct: 218 EVTA 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 21/232 (9%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHK-ETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
+F+K + + ++ K++ G +G V R K +++ ++ Q E
Sbjct: 25 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 84
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAET 473
IM D+P ++ + K + +V EY+E G S L K+
Sbjct: 85 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 144
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
++YL G VHRDL N+LI + K++DFGLS++ L + Y R K
Sbjct: 145 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV----LEDDPEAAYTTRGGK- 199
Query: 534 FSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
P + +PE I + + D WS G++L+E + +GE P
Sbjct: 200 --------IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERP 238
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 30/225 (13%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+ TV + I +G++G+VY K K++ + Q++ E ++ T
Sbjct: 7 DGQITVGQRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-----KNTGPLPADMARFYFAETVLAV 477
+ ++ ++ + TK L +V ++ EG L K D+AR +T +
Sbjct: 63 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR----QTAQGM 117
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
+YLH+ I+HRDLK +N+ + +K+ DFGL+ E + QF +
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-----------EKSRWSGSHQF--E 164
Query: 538 QVYGTPEYIAPEVILRQG---YGKPVDWWSMGVILYEFLVGCVPF 579
Q+ G+ ++APEVI Q Y D ++ G++LYE + G +P+
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 21/232 (9%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHK-ETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
+F+K + + ++ K++ G +G V R K +++ ++ Q E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAET 473
IM D+P ++ + K + +V EY+E G S L K+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
++YL G VHRDL N+LI + K++DFGL+++ L + Y R K
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARV----LEDDPEAAYTTRGGK- 211
Query: 534 FSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
P + +PE I + + D WS G++L+E + +GE P
Sbjct: 212 --------IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERP 250
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 18/184 (9%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
+++ AE ++M DNP++V M E + + LVME E G L+ +
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 115
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
+ + ++YL VHRDL N+L+ + K++DFGLSK
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK--------------AL 161
Query: 529 RDAKQFSDKQVYGT--PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPE 585
R + + Q +G ++ APE I + D WS GV+++E F G P+ G
Sbjct: 162 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 221
Query: 586 ELFA 589
E+ A
Sbjct: 222 EVTA 225
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
++ T ++ I +G +G V+L + + + A+K I + S+ + +E E ++M +
Sbjct: 27 SELTFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIKEGSMSEDDFIE----EAEVMMKLSH 81
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT-GPLPADMARFYFAETVLAVEYLHS 482
P +V +Y + +CLV E++E G + L+ G A+ + + YL
Sbjct: 82 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 141
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
++HRDL N L+ IK++DFG+++ L + Y +F K
Sbjct: 142 ACVIHRDLAARNCLVGENQVIKVSDFGMTRF-------VLDDQYTSSTGTKFPVK----- 189
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPF 579
+ +PEV Y D WS GV+++E F G +P+
Sbjct: 190 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 225
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
++ T ++ I +G +G V+L + + + A+K I + ++ E E ++M +
Sbjct: 5 SELTFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSH 59
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT-GPLPADMARFYFAETVLAVEYLHS 482
P +V +Y + +CLV E++E G + L+ G A+ + + YL
Sbjct: 60 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 119
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
++HRDL N L+ IK++DFG+++ L + Y +F K
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRF-------VLDDQYTSSTGTKFPVK----- 167
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPF 579
+ +PEV Y D WS GV+++E F G +P+
Sbjct: 168 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 203
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
++ T ++ I +G +G V+L + + + A+K I + ++ E E ++M +
Sbjct: 7 SELTFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSH 61
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT-GPLPADMARFYFAETVLAVEYLHS 482
P +V +Y + +CLV E++E G + L+ G A+ + + YL
Sbjct: 62 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
++HRDL N L+ IK++DFG+++ L + Y +F K
Sbjct: 122 ACVIHRDLAARNCLVGENQVIKVSDFGMTRF-------VLDDQYTSSTGTKFPVK----- 169
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPF 579
+ +PEV Y D WS GV+++E F G +P+
Sbjct: 170 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 205
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 21/232 (9%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHK-ETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
+F+K + + ++ K++ G +G V R K +++ ++ Q E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAET 473
IM D+P ++ + K + +V EY+E G S L K+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
++YL G VHRDL N+LI + K++DFGL ++ L + Y R K
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRV----LEDDPEAAYTTRGGK- 211
Query: 534 FSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
P + +PE I + + D WS G++L+E + +GE P
Sbjct: 212 --------IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERP 250
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 52/274 (18%)
Query: 348 DSYCSKKDKFSKTPNENDFTVIKLISNGAYGSV-----YLVRHKETRQRFAMKKIIKNSL 402
D++ +D + P +N + K + G +G V + ++ + A+K + +N+
Sbjct: 8 DAFKILEDPKWEFPRKN-LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 403 MLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT---G 459
+++ + +E +++ ++P V+ +Y + L L++EY + G L+ + G
Sbjct: 67 --PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 460 P----------------------LPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLI 497
P D+ F + + ++YL +VHRDL N+L+
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAW-QISQGMQYLAEMKLVHRDLAARNILV 183
Query: 498 TALGHIKLTDFGLSKMGLMSLATNLYE--CYVERDAKQFSDKQVYGTPEYIAPEVILRQG 555
+K++DFGLS+ ++YE YV+R + K ++A E +
Sbjct: 184 AEGRKMKISDFGLSR--------DVYEEDSYVKRSQGRIPVK-------WMAIESLFDHI 228
Query: 556 YGKPVDWWSMGVILYEFL-VGCVPFFGETPEELF 588
Y D WS GV+L+E + +G P+ G PE LF
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF 262
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
++ T ++ I +G +G V+L + + + A+K I + ++ E E ++M +
Sbjct: 10 SELTFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSH 64
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT-GPLPADMARFYFAETVLAVEYLHS 482
P +V +Y + +CLV E++E G + L+ G A+ + + YL
Sbjct: 65 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 124
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
++HRDL N L+ IK++DFG+++ L + Y +F K
Sbjct: 125 ACVIHRDLAARNCLVGENQVIKVSDFGMTRF-------VLDDQYTSSTGTKFPVK----- 172
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPF 579
+ +PEV Y D WS GV+++E F G +P+
Sbjct: 173 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 208
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
++ T ++ I +G +G V+L + + + A+K I + ++ E E ++M +
Sbjct: 8 SELTFVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSH 62
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT-GPLPADMARFYFAETVLAVEYLHS 482
P +V +Y + +CLV E++E G + L+ G A+ + + YL
Sbjct: 63 PKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 122
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
++HRDL N L+ IK++DFG+++ L + Y +F K
Sbjct: 123 ACVIHRDLAARNCLVGENQVIKVSDFGMTRF-------VLDDQYTSSTGTKFPVK----- 170
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPF 579
+ +PEV Y D WS GV+++E F G +P+
Sbjct: 171 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 206
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++S+GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 13 KETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 70
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 175
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 99/248 (39%), Gaps = 55/248 (22%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS---- 419
N F VI+ + +G +G V L +H + ++ +A+K +++N ++ E DI+
Sbjct: 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVK-VVRN---IKKYTRSAKIEADILKKIQN 90
Query: 420 -FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL--KNTGPLPADMARFYFAETVLA 476
+N +V + F H+CL+ E + G ++ N + + Y E + A
Sbjct: 91 DDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKA 149
Query: 477 VEYLHSYGIVHRDLKPDNLLI-------------------------TALGHIKLTDFGLS 511
+ YL + H DLKP+N+L+ T IKL DFG +
Sbjct: 150 LNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCA 209
Query: 512 KMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE 571
K + T +Y APEVIL G+ D WS G +L E
Sbjct: 210 TF------------------KSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251
Query: 572 FLVGCVPF 579
G + F
Sbjct: 252 LYTGSLLF 259
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++S+GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 20 KETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 77
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 182
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 183 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 100/248 (40%), Gaps = 26/248 (10%)
Query: 389 RQRFAMKKIIKNSL------MLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLV 442
R+R K+ +L R Q E A R P VV ++ E L +
Sbjct: 58 RERIVALKLXSETLSSDPVFRTRXQREARTAGR-----LQEPHVVPIHDFGEIDGQLYVD 112
Query: 443 MEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGH 502
+ G D A+ L+ GPL A + A++ H+ G HRD+KP+N+L++A
Sbjct: 113 XRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDF 172
Query: 503 IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDW 562
L DFG++ AT D K GT Y APE D
Sbjct: 173 AYLVDFGIAS------ATT--------DEKLTQLGNTVGTLYYXAPERFSESHATYRADI 218
Query: 563 WSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNP 622
+++ +LYE L G P+ G+ AH +N I PS I V ++I +NP
Sbjct: 219 YALTCVLYECLTGSPPYQGDQLSVXGAH-INQAIPRPSTVRPGIPVAFDAVIARGXAKNP 277
Query: 623 RDRLGTGG 630
DR T G
Sbjct: 278 EDRYVTCG 285
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 26/250 (10%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
N+F LI +G +G VY ++ + A+K+ S +E+ E + +SF +
Sbjct: 39 NNFDHKFLIGHGVFGKVYKGVLRDG-AKVALKRRTPES---SQGIEEFETEIETLSFCRH 94
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA----VEY 479
P +V++ + + + L+ +Y+E G+ L + M+ E + + Y
Sbjct: 95 PHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHY 154
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LH+ I+HRD+K N+L+ K+TDFG+SK G T L + ++ K
Sbjct: 155 LHTRAIIHRDVKSINILLDENFVPKITDFGISKKG-----TELGQTHLXXVVK------- 202
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GT YI PE ++ + D +S GV+L+E L P E+ + EW
Sbjct: 203 -GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV-----NLAEWA 256
Query: 600 SEDDWPIQVE 609
E Q+E
Sbjct: 257 VESHNNGQLE 266
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 32/237 (13%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++S+GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 20 KETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 77
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLK----NTGPLPADMARFYFA 471
M+ DNP V + C T + L+M+ + G ++ N G + +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIG---SQYLLNWCV 131
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+ + YL +VHRDL N+L+ H+K+TDFGL+K+ + +
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEE 178
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
K++ + +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 179 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 24/276 (8%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQR---FAMKKIIKNSLMLRNQMEQVF 412
+F+K + + + K+I G +G V R K +R A+K + + Q
Sbjct: 21 EFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL--KAGYTDKQRRDFL 78
Query: 413 AERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFA 471
+E IM D+P ++ + K + ++ EY+E G + L KN G
Sbjct: 79 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 138
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
++YL VHRDL N+L+ + K++DFG+S++ L + Y R
Sbjct: 139 GIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRV----LEDDPEAAYTTRGG 194
Query: 532 KQFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFL-VGCVPFFGETPEELFA 589
K P + APE I + + D WS G++++E + G P++ + +++
Sbjct: 195 K---------IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI- 244
Query: 590 HTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
+ + P D PI + ++ D Q+ DR
Sbjct: 245 KAIEEGYRLPPPMDCPIALH--QLMLDCWQKERSDR 278
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 26/250 (10%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
N+F LI +G +G VY ++ + A+K+ S +E+ E + +SF +
Sbjct: 39 NNFDHKFLIGHGVFGKVYKGVLRDG-AKVALKRRTPES---SQGIEEFETEIETLSFCRH 94
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLA----VEY 479
P +V++ + + + L+ +Y+E G+ L + M+ E + + Y
Sbjct: 95 PHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHY 154
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
LH+ I+HRD+K N+L+ K+TDFG+SK G T L + ++ K
Sbjct: 155 LHTRAIIHRDVKSINILLDENFVPKITDFGISKKG-----TELDQTHLXXVVK------- 202
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWP 599
GT YI PE ++ + D +S GV+L+E L P E+ + EW
Sbjct: 203 -GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV-----NLAEWA 256
Query: 600 SEDDWPIQVE 609
E Q+E
Sbjct: 257 VESHNNGQLE 266
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
+++ AE ++M DNP++V M E + + LVME E G L+ +
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE 115
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
+ + ++YL VHRDL N+L+ + K++DFGLSK + N Y+
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA--LRADENXYKA--- 170
Query: 529 RDAKQFSDKQVYGT--PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPE 585
Q +G ++ APE I + D WS GV+++E F G P+ G
Sbjct: 171 ---------QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 221
Query: 586 ELFA 589
E+ A
Sbjct: 222 EVTA 225
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 34/236 (14%)
Query: 352 SKKDKFSKTP---NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQM 408
+ +D+F ++ N + +++ I G +G V L ++ + K IKN +
Sbjct: 6 AAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNK---VAVKCIKN-----DAT 57
Query: 409 EQVF-AERDIMS-FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG--PLPAD 464
Q F AE +M+ + V + E K L +V EY+ G L++ G L D
Sbjct: 58 AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD 117
Query: 465 MARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYE 524
+ + A+EYL VHRDL N+L++ K++DFGL+K E
Sbjct: 118 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----------E 166
Query: 525 CYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPF 579
+D + K + APE + + + D WS G++L+E + G VP+
Sbjct: 167 ASSTQDTGKLPVK-------WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 34/236 (14%)
Query: 352 SKKDKFSKTP---NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQM 408
+ +D+F ++ N + +++ I G +G V L ++ + K IKN +
Sbjct: 178 AAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNK---VAVKCIKN-----DAT 229
Query: 409 EQVF-AERDIMS-FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG--PLPAD 464
Q F AE +M+ + V + E K L +V EY+ G L++ G L D
Sbjct: 230 AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD 289
Query: 465 MARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYE 524
+ + A+EYL VHRDL N+L++ K++DFGL+K E
Sbjct: 290 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----------E 338
Query: 525 CYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPF 579
+D + K + APE + + + D WS G++L+E + G VP+
Sbjct: 339 ASSTQDTGKLPVK-------WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 30/225 (13%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTD 422
+ TV + I +G++G+VY K K++ + Q++ E ++ T
Sbjct: 7 DGQITVGQRIGSGSFGTVY----KGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-----KNTGPLPADMARFYFAETVLAV 477
+ ++ ++ + T L +V ++ EG L K D+AR +T +
Sbjct: 63 HVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR----QTAQGM 117
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
+YLH+ I+HRDLK +N+ + +K+ DFGL+ + ++ +E
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE------------- 164
Query: 538 QVYGTPEYIAPEVILRQG---YGKPVDWWSMGVILYEFLVGCVPF 579
Q+ G+ ++APEVI Q Y D ++ G++LYE + G +P+
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 24/276 (8%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQR---FAMKKIIKNSLMLRNQMEQVF 412
+F+K + + + K+I G +G V R K +R A+K + + Q
Sbjct: 6 EFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL--KAGYTDKQRRDFL 63
Query: 413 AERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFA 471
+E IM D+P ++ + K + ++ EY+E G + L KN G
Sbjct: 64 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 123
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
++YL VHRDL N+L+ + K++DFG+S++ L + Y R
Sbjct: 124 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV----LEDDPEAAYTTRGG 179
Query: 532 KQFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFL-VGCVPFFGETPEELFA 589
K P + APE I + + D WS G++++E + G P++ + +++
Sbjct: 180 K---------IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI- 229
Query: 590 HTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
+ + P D PI + ++ D Q+ DR
Sbjct: 230 KAIEEGYRLPPPMDCPIALH--QLMLDCWQKERSDR 263
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 141/368 (38%), Gaps = 87/368 (23%)
Query: 366 FTVIKLISNGAYGS-----------VYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV--- 411
+TV + IS+G+YG+ V + R T I+ +S + + + ++
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 412 --FAERDIMSFTDNPFVVTMYCSFE--TKKHLCLVMEYVEGGDCASLLKNTGPLPADMAR 467
F +I+ D ++ FE L LV E + + + +
Sbjct: 84 NHFHHPNILGLRD------IFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQ 137
Query: 468 FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
++ +L + LH G+VHRDL P N+L+ I + DF L+
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA---------------- 181
Query: 528 ERDAKQFSDKQVYGTPE-YIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPE 585
R+ ++K Y T Y APE++++ +G+ K VD WS G ++ E F G T
Sbjct: 182 -REDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST-- 238
Query: 586 ELFAHTVNDDIEW--------------PSEDD-------------WPIQVE-----AKSI 613
F + +N +E PS D W V A +
Sbjct: 239 --FYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDL 296
Query: 614 ITDLLQQNPRDRLGTGGPHEVKEHPYFSN----LDWNSLLRHKAEFIPQLDDEEDT-SYF 668
I +L+ NP+ R+ T + HPYF + LD L + F + D D F
Sbjct: 297 IAKMLEFNPQRRIST---EQALRHPYFESLFDPLDLTEGLSERFHFDESVTDVYDMHKIF 353
Query: 669 DSRMERYN 676
+ +ER+N
Sbjct: 354 TAEVERFN 361
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERD--- 416
T +N+ K I G +G V+ R + + A+K +I +M + F E
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 417 -IMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCA-SLLKNTGPLPADMARFYFAETV 474
IMS ++P +V +Y + VME+V GD LL P+ + +
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 475 LAVEYLHSYG--IVHRDLKPDNLLITALGH-----IKLTDFGLSKMGLMSLATNLYECYV 527
L +EY+ + IVHRDL+ N+ + +L K+ DFG S+ + S++ L
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLL----- 187
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVIL--RQGYGKPVDWWSMGVILYEFLVGCVPF 579
G +++APE I + Y + D +S +ILY L G PF
Sbjct: 188 -------------GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 369 IKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS--FTD 422
I+ + G +G V L R+ T ++ A+K + S N + + E +I+ + +
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLYHE 83
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAETVLAVEYLH 481
N C+ + + L+ME++ G L KN + Y + ++YL
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 143
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
S VHRDL N+L+ + +K+ DFGL+K +E D + + K
Sbjct: 144 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKA-------------IETDKEXXTVKDDRD 190
Query: 542 TPEY-IAPEVILRQGYGKPVDWWSMGVILYEFLVGC 576
+P + APE +++ + D WS GV L+E L C
Sbjct: 191 SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC 226
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 32/237 (13%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 14 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 71
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLK----NTGPLPADMARFYFA 471
M+ DNP V + C T + L+M+ + G ++ N G + +
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGXLLDYVREHKDNIG---SQYLLNWCV 125
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+ + YL +VHRDL N+L+ H+K+TDFGL+K+ + +
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEE 172
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
K++ + +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 173 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 229
>pdb|1V9V|A Chain A, Solution Structure Of Putative Domain Of Human Kiaa0561
Protein
Length = 114
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
Query: 173 PKAIQQMETRLSNFINENSSLATNNLETASPDAAPIIRFVHHQILEIARDCLFKSKEKLI 232
PKA QME RL F+ + A L A ++ F+HHQI+E+ARDCL KS E L+
Sbjct: 8 PKATAQMEGRLQEFLTAYAPGARLAL------ADGVLGFIHHQIVELARDCLAKSGENLV 61
Query: 233 SSRYFYEM 240
+SRYF EM
Sbjct: 62 TSRYFLEM 69
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 25/217 (11%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM-- 429
+ G +GSV ++ +++ + + + E++ E IM DNP++V +
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 430 YCSFETKKHLCLVMEYVEGGDCAS-LLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHR 488
C E L LVME GG L+ +P + + ++YL VHR
Sbjct: 404 VCQAEA---LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 460
Query: 489 DLKPDNLLITALGHIKLTDFGLSK-MGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIA 547
+L N+L+ + K++DFGLSK +G A + Y Y R A ++ K + A
Sbjct: 461 NLAARNVLLVNRHYAKISDFGLSKALG----ADDSY--YTARSAGKWPLK-------WYA 507
Query: 548 PEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
PE I + + D WS GV ++E L +G+ P
Sbjct: 508 PECINFRKFSSRSDVWSYGVTMWEALS-----YGQKP 539
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHK-ETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
+F+K + + ++ K++ G +G V R K +++ ++ Q E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETV 474
IM D+P ++ + K + +V E +E G S L+ A+F + V
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQLV 150
Query: 475 -------LAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
++YL G VHRDL N+LI + K++DFGLS++ L + Y
Sbjct: 151 GMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRV----LEDDPEAAYT 206
Query: 528 ERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
R K P + +PE I + + D WS G++L+E + +GE P
Sbjct: 207 TRGGK---------IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERP 250
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 372 ISNGAYGSV----YLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVV 427
+ G +GSV Y +R K+ K++K + E++ E IM DNP++V
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAI---KVLKQGTE-KADTEEMMREAQIMHQLDNPYIV 73
Query: 428 TM--YCSFETKKHLCLVMEYVEGGDCAS-LLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
+ C E L LVME GG L+ +P + + ++YL
Sbjct: 74 RLIGVCQAEA---LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 485 IVHRDLKPDNLLITALGHIKLTDFGLSK-MGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
VHRDL N+L+ + K++DFGLSK +G A + Y Y R A ++ K
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALG----ADDSY--YTARSAGKWPLK------ 178
Query: 544 EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
+ APE I + + D WS GV ++E L +G+ P
Sbjct: 179 -WYAPECINFRKFSSRSDVWSYGVTMWEALS-----YGQKP 213
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 141/368 (38%), Gaps = 87/368 (23%)
Query: 366 FTVIKLISNGAYGS-----------VYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV--- 411
+TV + IS+G+YG+ V + R T I+ +S + + + ++
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 412 --FAERDIMSFTDNPFVVTMYCSFE--TKKHLCLVMEYVEGGDCASLLKNTGPLPADMAR 467
F +I+ D ++ FE L LV E + + + +
Sbjct: 84 NHFHHPNILGLRD------IFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQ 137
Query: 468 FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
++ +L + LH G+VHRDL P N+L+ I + DF L+
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA---------------- 181
Query: 528 ERDAKQFSDKQVYGTPE-YIAPEVILR-QGYGKPVDWWSMGVILYEFLVGCVPFFGETPE 585
R+ ++K Y T Y APE++++ +G+ K VD WS G ++ E F G T
Sbjct: 182 -REDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST-- 238
Query: 586 ELFAHTVNDDIEW--------------PSEDD-------------WPIQVE-----AKSI 613
F + +N +E PS D W V A +
Sbjct: 239 --FYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDL 296
Query: 614 ITDLLQQNPRDRLGTGGPHEVKEHPYFSN----LDWNSLLRHKAEFIPQLDDEEDT-SYF 668
I +L+ NP+ R+ T + HPYF + LD L + F + D D F
Sbjct: 297 IAKMLEFNPQRRIST---EQALRHPYFESLFDPLDLTEGLSERFHFDESVTDVYDMHKIF 353
Query: 669 DSRMERYN 676
+ +ER+N
Sbjct: 354 TAEVERFN 361
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVF-AERDIMS- 419
N + +++ I G +G V L ++ + K IKN + Q F AE +M+
Sbjct: 4 NMKELKLLQTIGKGEFGDVMLGDYRGNK---VAVKCIKN-----DATAQAFLAEASVMTQ 55
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLAV 477
+ V + E K L +V EY+ G L++ G L D + + A+
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 115
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
EYL VHRDL N+L++ K++DFGL+K E +D + K
Sbjct: 116 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----------EASSTQDTGKLPVK 164
Query: 538 QVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPF 579
+ APE + + + D WS G++L+E + G VP+
Sbjct: 165 -------WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 369 IKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMS--FTD 422
I+ + G +G V L R+ T ++ A+K + S N + + E +I+ + +
Sbjct: 14 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLYHE 71
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAETVLAVEYLH 481
N C+ + + L+ME++ G L KN + Y + ++YL
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 131
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
S VHRDL N+L+ + +K+ DFGL+K +E D + + K
Sbjct: 132 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKA-------------IETDKEXXTVKDDRD 178
Query: 542 TPEY-IAPEVILRQGYGKPVDWWSMGVILYEFLVGC 576
+P + APE +++ + D WS GV L+E L C
Sbjct: 179 SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 24/275 (8%)
Query: 357 FSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQR---FAMKKIIKNSLMLRNQMEQVFA 413
F+K + + + K+I G +G V R K +R A+K + + Q +
Sbjct: 1 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL--KAGYTDKQRRDFLS 58
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAE 472
E IM D+P ++ + K + ++ EY+E G + L KN G
Sbjct: 59 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRG 118
Query: 473 TVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
++YL VHRDL N+L+ + K++DFG+S++ L + Y R K
Sbjct: 119 IGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV----LEDDPEAAYTTRGGK 174
Query: 533 QFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFL-VGCVPFFGETPEELFAH 590
P + APE I + + D WS G++++E + G P++ + +++
Sbjct: 175 ---------IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-K 224
Query: 591 TVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
+ + P D PI + ++ D Q+ DR
Sbjct: 225 AIEEGYRLPPPMDCPIALH--QLMLDCWQKERSDR 257
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 23 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 80
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 81 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 138
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 139 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 185
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 186 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 238
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 31/223 (13%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVF-AERDIMS- 419
N + +++ I G +G V L ++ + K IKN + Q F AE +M+
Sbjct: 10 NMKELKLLQTIGKGEFGDVMLGDYRGNK---VAVKCIKN-----DATAQAFLAEASVMTQ 61
Query: 420 FTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG--PLPADMARFYFAETVLAV 477
+ V + E K L +V EY+ G L++ G L D + + A+
Sbjct: 62 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 121
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
EYL VHRDL N+L++ K++DFGL+K E +D + K
Sbjct: 122 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----------EASSTQDTGKLPVK 170
Query: 538 QVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPF 579
+ APE + + D WS G++L+E + G VP+
Sbjct: 171 -------WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 19 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 76
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 134
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 135 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 181
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 182 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 234
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 102/231 (44%), Gaps = 36/231 (15%)
Query: 350 YCSKKDKFSKTPNEND-----FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLML 404
YC F N D + V I++G G +YL + R + K + +S
Sbjct: 61 YCGSPYSFLPQLNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GD 119
Query: 405 RNQMEQVFAERDIMSFTDNPFVVTMYCSFE-TKKHL----CLVMEYVEGGDCASLLKNTG 459
AER ++ +P +V ++ E T +H +VMEYV G SL ++ G
Sbjct: 120 AEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGG---QSLKRSKG 176
Query: 460 -PLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSL 518
LP A Y E + A+ YLHS G+V+ DLKP+N+++T +KL D G
Sbjct: 177 QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE-EQLKLIDLGAV------- 228
Query: 519 ATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVIL 569
++ S +YGTP + APE++ R G D +++G L
Sbjct: 229 ------------SRINSFGYLYGTPGFQAPEIV-RTGPTVATDIYTVGRTL 266
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 70
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GXLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 175
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 32/237 (13%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 17 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 74
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLK----NTGPLPADMARFYFA 471
M+ DNP V + C T + L+M+ + G ++ N G + +
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIG---SQYLLNWCV 128
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+ + YL +VHRDL N+L+ H+K+TDFGL+K+ + +
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEE 175
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
K++ + +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 176 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 232
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 16 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 73
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 178
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 179 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 231
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 360 TPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERD--- 416
T +N+ K I G +G V+ R + + A+K +I +M + F E
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 417 -IMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCA-SLLKNTGPLPADMARFYFAETV 474
IMS ++P +V +Y + VME+V GD LL P+ + +
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 475 LAVEYLHSYG--IVHRDLKPDNLLITALGH-----IKLTDFGLSKMGLMSLATNLYECYV 527
L +EY+ + IVHRDL+ N+ + +L K+ DF LS+ + S++ L
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLL----- 187
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVIL--RQGYGKPVDWWSMGVILYEFLVGCVPF 579
G +++APE I + Y + D +S +ILY L G PF
Sbjct: 188 -------------GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHK-ETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
+F+K + + ++ K++ G +G V R K +++ ++ Q E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETV 474
IM D+P ++ + K + +V E +E G S L+ A+F + V
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQLV 150
Query: 475 -------LAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
++YL G VHRDL N+LI + K++DFGLS++ L + Y
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV----LEDDPEAAYT 206
Query: 528 ERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
R K P + +PE I + + D WS G++L+E + +GE P
Sbjct: 207 TRGGK---------IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERP 250
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVER 529
F + AVE+LHS G++HRDLKP N+ T +K+ DFGL + M
Sbjct: 170 FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL--VTAMDQDEEEQTVLTPM 227
Query: 530 DAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFL 573
A QV GT Y++PE I Y VD +S+G+IL+E L
Sbjct: 228 PAYATHXGQV-GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 70
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 175
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 38 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 95
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 153
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 154 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 200
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 201 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 253
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 32/237 (13%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 14 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 71
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLK----NTGPLPADMARFYFA 471
M+ DNP V + C T + L+M+ + G ++ N G + +
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIG---SQYLLNWCV 125
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+ + YL +VHRDL N+L+ H+K+TDFGL+K+ + +
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEE 172
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
K++ + +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 173 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 229
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 15 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 72
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 177
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 16 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 73
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 178
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 179 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 231
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 32/237 (13%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 70
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLK----NTGPLPADMARFYFA 471
M+ DNP V + C T + L+M+ + G ++ N G + +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIG---SQYLLNWCV 124
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+ + YL +VHRDL N+L+ H+K+TDFGL+K+ + +
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEE 171
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
K++ + +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 129/306 (42%), Gaps = 46/306 (15%)
Query: 344 ESNSDSYC-----SKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKII 398
+ ++ +YC S + P +N T+I+ + +GA+G VY Q M
Sbjct: 21 QGSNPNYCFAGKTSSISDLKEVPRKN-ITLIRGLGHGAFGEVY------EGQVSGMPNDP 73
Query: 399 KNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY-------CSFETKKHL--CLVMEYVEGG 449
+ + +V++E+D + F +++ + C + + L +++E + GG
Sbjct: 74 SPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 133
Query: 450 DCASLLKNTGPLPADMARFYFAETV-------LAVEYLHSYGIVHRDLKPDNLLITALGH 502
D S L+ T P P+ + + + +YL +HRD+ N L+T G
Sbjct: 134 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGP 193
Query: 503 IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPVD 561
++ +K+G +A ++Y A + P +++ PE + + D
Sbjct: 194 GRV-----AKIGDFGMARDIYR------ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 242
Query: 562 WWSMGVILYE-FLVGCVPFFGETPEELFAH-TVNDDIEWPSEDDWPIQVEAKSIITDLLQ 619
WS GV+L+E F +G +P+ ++ +E+ T ++ P P+ I+T Q
Sbjct: 243 TWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIMTQCWQ 298
Query: 620 QNPRDR 625
P DR
Sbjct: 299 HQPEDR 304
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 20 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 77
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 182
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 183 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 32/237 (13%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 15 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 72
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLK----NTGPLPADMARFYFA 471
M+ DNP V + C T + L+M+ + G ++ N G + +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIG---SQYLLNWCV 126
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+ + YL +VHRDL N+L+ H+K+TDFGL+K+ + +
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEE 173
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
K++ + +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 32/237 (13%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 16 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 73
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLK----NTGPLPADMARFYFA 471
M+ DNP V + C T + L+M+ + G ++ N G + +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIG---SQYLLNWCV 127
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+ + YL +VHRDL N+L+ H+K+TDFGL+K+ + +
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEE 174
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
K++ + +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 175 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 231
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 16 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 73
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 178
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 179 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 231
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 7 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 64
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 65 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 169
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 170 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 222
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 21/232 (9%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHK-ETRQRFAMKKIIKNSLMLRNQMEQVFAE 414
+F+K + + ++ K++ G +G V R K +++ ++ Q E
Sbjct: 8 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 415 RDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAET 473
IM D+P ++ + K + +V E +E G S L K+
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGI 127
Query: 474 VLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQ 533
++YL G VHRDL N+LI + K++DFGLS++ L + Y R K
Sbjct: 128 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV----LEDDPEAAYTTRGGK- 182
Query: 534 FSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
P + +PE I + + D WS G++L+E + +GE P
Sbjct: 183 --------IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-----YGERP 221
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 120/274 (43%), Gaps = 52/274 (18%)
Query: 348 DSYCSKKDKFSKTPNENDFTVIKLISNGAYGSV-----YLVRHKETRQRFAMKKIIKNSL 402
D++ +D + P +N + K + G +G V + ++ + A+K + +N+
Sbjct: 8 DAFKILEDPKWEFPRKN-LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 403 MLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT---G 459
+++ + +E +++ ++P V+ +Y + L L++EY + G L+ + G
Sbjct: 67 --PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 460 P----------------------LPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLI 497
P D+ F + + ++YL +VHRDL N+L+
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAW-QISQGMQYLAEMSLVHRDLAARNILV 183
Query: 498 TALGHIKLTDFGLSKMGLMSLATNLYE--CYVERDAKQFSDKQVYGTPEYIAPEVILRQG 555
+K++DFGLS+ ++YE V+R + K ++A E +
Sbjct: 184 AEGRKMKISDFGLSR--------DVYEEDSXVKRSQGRIPVK-------WMAIESLFDHI 228
Query: 556 YGKPVDWWSMGVILYEFL-VGCVPFFGETPEELF 588
Y D WS GV+L+E + +G P+ G PE LF
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF 262
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 128/306 (41%), Gaps = 46/306 (15%)
Query: 344 ESNSDSYC-----SKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKII 398
+ ++ +YC S + P +N T+I+ + +GA+G VY Q M
Sbjct: 21 QGSNPNYCFAGKTSSISDLKEVPRKN-ITLIRGLGHGAFGEVY------EGQVSGMPNDP 73
Query: 399 KNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY-------CSFETKKHL--CLVMEYVEGG 449
+ + +V +E+D + F +++ + C + + L ++ME + GG
Sbjct: 74 SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGG 133
Query: 450 DCASLLKNTGPLPADMARFYFAETV-------LAVEYLHSYGIVHRDLKPDNLLITALGH 502
D S L+ T P P+ + + + +YL +HRD+ N L+T G
Sbjct: 134 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGP 193
Query: 503 IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPVD 561
+ ++K+G +A ++Y A + P +++ PE + + D
Sbjct: 194 GR-----VAKIGDFGMARDIYR------ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 242
Query: 562 WWSMGVILYE-FLVGCVPFFGETPEELFAH-TVNDDIEWPSEDDWPIQVEAKSIITDLLQ 619
WS GV+L+E F +G +P+ ++ +E+ T ++ P P+ I+T Q
Sbjct: 243 TWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIMTQCWQ 298
Query: 620 QNPRDR 625
P DR
Sbjct: 299 HQPEDR 304
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 70
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 175
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 10 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 67
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAE 125
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 126 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 172
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 173 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 225
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 129/311 (41%), Gaps = 46/311 (14%)
Query: 339 TDTSIESNSDSYC-----SKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFA 393
T T + + +YC S + P +N T+I+ + +GA+G VY Q
Sbjct: 18 TSTIMTDYNPNYCFAGKTSSISDLKEVPRKN-ITLIRGLGHGAFGEVY------EGQVSG 70
Query: 394 MKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY-------CSFETKKHL--CLVME 444
M + + +V +E+D + F +++ + C + + L +++E
Sbjct: 71 MPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 130
Query: 445 YVEGGDCASLLKNTGPLPADMARFYFAETV-------LAVEYLHSYGIVHRDLKPDNLLI 497
+ GGD S L+ T P P+ + + + +YL +HRD+ N L+
Sbjct: 131 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 190
Query: 498 TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP-EYIAPEVILRQGY 556
T G ++ +K+G +A ++Y A + P +++ PE + +
Sbjct: 191 TCPGPGRV-----AKIGDFGMARDIYR------ASYYRKGGCAMLPVKWMPPEAFMEGIF 239
Query: 557 GKPVDWWSMGVILYE-FLVGCVPFFGETPEELFAH-TVNDDIEWPSEDDWPIQVEAKSII 614
D WS GV+L+E F +G +P+ ++ +E+ T ++ P P+ I+
Sbjct: 240 TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIM 295
Query: 615 TDLLQQNPRDR 625
T Q P DR
Sbjct: 296 TQCWQHQPEDR 306
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 24/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 66
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETVLAVEYLH 481
P +V + + ++ E++ G+ L+ N + A + + + A+EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T + +F K
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----FTAHAGAKFPIK---- 175
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPS 600
+ APE + + D W+ GV+L+E G P+ G P +++ + D
Sbjct: 176 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY-ELLEKDYRMER 231
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 232 PEGCPEKV--YELMRACWQWNPSDR 254
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 36/233 (15%)
Query: 362 NENDFTVIKLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E + +K++ +GA+G+VY V ET + KI+ + + +E E IM
Sbjct: 13 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIM 71
Query: 419 SFTDNPFVV---------TMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY 469
+ D+P +V T+ + H CL +EYV ++ + + + +
Sbjct: 72 ASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCL-LEYVH--------EHKDNIGSQLLLNW 122
Query: 470 FAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVER 529
+ + YL +VHRDL N+L+ + H+K+TDFGL+++ +E
Sbjct: 123 CVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARL-------------LEG 169
Query: 530 DAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFG 581
D K+++ +++A E I + + D WS GV ++E + G P+ G
Sbjct: 170 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 222
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 120/274 (43%), Gaps = 52/274 (18%)
Query: 348 DSYCSKKDKFSKTPNENDFTVIKLISNGAYGSV-----YLVRHKETRQRFAMKKIIKNSL 402
D++ +D + P +N + K + G +G V + ++ + A+K + +N+
Sbjct: 8 DAFKILEDPKWEFPRKN-LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 403 MLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT---G 459
+++ + +E +++ ++P V+ +Y + L L++EY + G L+ + G
Sbjct: 67 --PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 460 P----------------------LPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLI 497
P D+ F + + ++YL +VHRDL N+L+
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAW-QISQGMQYLAEMKLVHRDLAARNILV 183
Query: 498 TALGHIKLTDFGLSKMGLMSLATNLYE--CYVERDAKQFSDKQVYGTPEYIAPEVILRQG 555
+K++DFGLS+ ++YE V+R + K ++A E +
Sbjct: 184 AEGRKMKISDFGLSR--------DVYEEDSXVKRSQGRIPVK-------WMAIESLFDHI 228
Query: 556 YGKPVDWWSMGVILYEFL-VGCVPFFGETPEELF 588
Y D WS GV+L+E + +G P+ G PE LF
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF 262
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 125/301 (41%), Gaps = 46/301 (15%)
Query: 349 SYC-----SKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
+YC S + P +N T+I+ + +GA+G VY Q M +
Sbjct: 11 NYCFAGKTSSISDLKEVPRKN-ITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQV 63
Query: 404 LRNQMEQVFAERDIMSFTDNPFVVTMY-------CSFETKKHL--CLVMEYVEGGDCASL 454
+ +V +E+D + F +++ + C + + L ++ME + GGD S
Sbjct: 64 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSF 123
Query: 455 LKNTGPLPADMARFYFAETV-------LAVEYLHSYGIVHRDLKPDNLLITALGHIKLTD 507
L+ T P P+ + + + +YL +HRD+ N L+T G +
Sbjct: 124 LRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR--- 180
Query: 508 FGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMG 566
++K+G +A ++Y A + P +++ PE + + D WS G
Sbjct: 181 --VAKIGDFGMARDIYR------ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 232
Query: 567 VILYE-FLVGCVPFFGETPEELFAH-TVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRD 624
V+L+E F +G +P+ ++ +E+ T ++ P P+ I+T Q P D
Sbjct: 233 VLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIMTQCWQHQPED 288
Query: 625 R 625
R
Sbjct: 289 R 289
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 28/245 (11%)
Query: 357 FSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQR---FAMKKIIKNSLMLRNQMEQVFA 413
F++ + + K+I +G G V R + QR A+K + + Q +
Sbjct: 42 FTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL--KAGYTERQRRDFLS 99
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
E IM D+P ++ + + +V EY+E G + L+ M
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159
Query: 474 VLA-VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
V A + YL G VHRDL N+L+ + K++DFGLS++ +E D
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV-------------LEDDPD 206
Query: 533 QFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
P + APE I + + D WS GV+++E L +GE P + +
Sbjct: 207 AAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA-----YGERP---YWNM 258
Query: 592 VNDDI 596
N D+
Sbjct: 259 TNRDV 263
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 129/311 (41%), Gaps = 46/311 (14%)
Query: 339 TDTSIESNSDSYC-----SKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFA 393
T T + + +YC S + P +N T+I+ + +GA+G VY Q
Sbjct: 19 TSTIMTDYNPNYCFAGKTSSISDLKEVPRKN-ITLIRGLGHGAFGEVY------EGQVSG 71
Query: 394 MKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY-------CSFETKKHL--CLVME 444
M + + +V +E+D + F +++ + C + + L +++E
Sbjct: 72 MPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 131
Query: 445 YVEGGDCASLLKNTGPLPADMARFYFAETV-------LAVEYLHSYGIVHRDLKPDNLLI 497
+ GGD S L+ T P P+ + + + +YL +HRD+ N L+
Sbjct: 132 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 191
Query: 498 TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP-EYIAPEVILRQGY 556
T G ++ +K+G +A ++Y A + P +++ PE + +
Sbjct: 192 TCPGPGRV-----AKIGDFGMARDIYR------AGYYRKGGCAMLPVKWMPPEAFMEGIF 240
Query: 557 GKPVDWWSMGVILYE-FLVGCVPFFGETPEELFAH-TVNDDIEWPSEDDWPIQVEAKSII 614
D WS GV+L+E F +G +P+ ++ +E+ T ++ P P+ I+
Sbjct: 241 TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIM 296
Query: 615 TDLLQQNPRDR 625
T Q P DR
Sbjct: 297 TQCWQHQPEDR 307
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 28/245 (11%)
Query: 357 FSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQR---FAMKKIIKNSLMLRNQMEQVFA 413
F++ + + K+I +G G V R + QR A+K + + Q +
Sbjct: 42 FTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL--KAGYTERQRRDFLS 99
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAET 473
E IM D+P ++ + + +V EY+E G + L+ M
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159
Query: 474 VLA-VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
V A + YL G VHRDL N+L+ + K++DFGLS++ L + Y K
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV----LEDDPDAAYTTTGGK 215
Query: 533 QFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
P + APE I + + D WS GV+++E L +GE P + +
Sbjct: 216 ---------IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA-----YGERP---YWNM 258
Query: 592 VNDDI 596
N D+
Sbjct: 259 TNRDV 263
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 38/234 (16%)
Query: 362 NENDFTVIKLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E + +K++ +GA+G+VY V ET + KI+ + + +E E IM
Sbjct: 36 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIM 94
Query: 419 SFTDNPFVV---------TMYCSFETKKHLCLVMEYV-EGGDCASLLKNTGPLPADMARF 468
+ D+P +V T+ + H CL +EYV E D N G + +
Sbjct: 95 ASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCL-LEYVHEHKD------NIG---SQLLLN 144
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
+ + + YL +VHRDL N+L+ + H+K+TDFGL+++ +E
Sbjct: 145 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARL-------------LE 191
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFG 581
D K+++ +++A E I + + D WS GV ++E + G P+ G
Sbjct: 192 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 245
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 24/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 66
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETVLAVEYLH 481
P +V + + +++E++ G+ L+ N + A + + + A+EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T +F K
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTX-----TAHAGAKFPIK---- 175
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPS 600
+ APE + + D W+ GV+L+E G P+ G P +++ + D
Sbjct: 176 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY-ELLEKDYRMER 231
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 232 PEGCPEKV--YELMRACWQWNPSDR 254
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY+ K+ A+K + ++++ ++E+ E +M +
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 87
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETVLAVEYLH 481
P +V + + +V EY+ G+ L+ N + A + + + A+EYL
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE 147
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK---- 196
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFG 581
+ APE + + D W+ GV+L+E G P+ G
Sbjct: 197 ---WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 234
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 24/222 (10%)
Query: 365 DFTVIKLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT 421
D + +++ G +G VY HK + A+K K+ + + E+ +E IM
Sbjct: 25 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTL--DNKEKFMSEAVIMKNL 82
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAETVLAVEYL 480
D+P +V + E + ++ME G+ L +N L Y + A+ YL
Sbjct: 83 DHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 141
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
S VHRD+ N+L+ + +KL DFGLS+ Y+E + + V
Sbjct: 142 ESINCVHRDIAVRNILVASPECVKLGDFGLSR-------------YIEDE--DYYKASVT 186
Query: 541 GTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFL-VGCVPFF 580
P ++++PE I + + D W V ++E L G PFF
Sbjct: 187 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 129/311 (41%), Gaps = 46/311 (14%)
Query: 339 TDTSIESNSDSYC-----SKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFA 393
T T + + +YC S + P +N T+I+ + +GA+G VY Q
Sbjct: 42 TSTIMTDYNPNYCFAGKTSSISDLKEVPRKN-ITLIRGLGHGAFGEVY------EGQVSG 94
Query: 394 MKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY-------CSFETKKHL--CLVME 444
M + + +V +E+D + F +++ + C + + L +++E
Sbjct: 95 MPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 154
Query: 445 YVEGGDCASLLKNTGPLPADMARFYFAETV-------LAVEYLHSYGIVHRDLKPDNLLI 497
+ GGD S L+ T P P+ + + + +YL +HRD+ N L+
Sbjct: 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 214
Query: 498 TALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP-EYIAPEVILRQGY 556
T G ++ +K+G +A ++Y A + P +++ PE + +
Sbjct: 215 TCPGPGRV-----AKIGDFGMARDIYR------AGYYRKGGCAMLPVKWMPPEAFMEGIF 263
Query: 557 GKPVDWWSMGVILYE-FLVGCVPFFGETPEELFAH-TVNDDIEWPSEDDWPIQVEAKSII 614
D WS GV+L+E F +G +P+ ++ +E+ T ++ P P+ I+
Sbjct: 264 TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIM 319
Query: 615 TDLLQQNPRDR 625
T Q P DR
Sbjct: 320 TQCWQHQPEDR 330
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 129/314 (41%), Gaps = 60/314 (19%)
Query: 369 IKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV----FAERDIMSFTDNP 424
I + G YG VY T + A+K+I L ++ E V E ++ +
Sbjct: 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRI-----RLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYG 484
++ + L L+ EY E D + + + + + + + V + HS
Sbjct: 94 NIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR 152
Query: 485 IVHRDLKPDNLLITALGH-----IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
+HRDLKP NLL++ +K+ DFGL++ + + +QF+ + +
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI-------------RQFTHEII 199
Query: 540 YGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELF----AHTVN 593
T Y PE++L + Y VD WS+ I E L+ F G++ ++LF +
Sbjct: 200 --TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLP 257
Query: 594 DDIEWPSED---DWPI---QVEAKSI---------------ITDLLQQNPRDRLGTGGPH 632
DD WP DW + K++ +T +L+ +P R+
Sbjct: 258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISA---K 314
Query: 633 EVKEHPYFSNLDWN 646
EHPYFS+ D++
Sbjct: 315 NALEHPYFSHNDFD 328
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 24/222 (10%)
Query: 365 DFTVIKLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT 421
D + +++ G +G VY HK + A+K K+ + + E+ +E IM
Sbjct: 9 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTL--DNKEKFMSEAVIMKNL 66
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAETVLAVEYL 480
D+P +V + E + ++ME G+ L +N L Y + A+ YL
Sbjct: 67 DHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 125
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
S VHRD+ N+L+ + +KL DFGLS+ Y+E + + V
Sbjct: 126 ESINCVHRDIAVRNILVASPECVKLGDFGLSR-------------YIEDE--DYYKASVT 170
Query: 541 GTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFL-VGCVPFF 580
P ++++PE I + + D W V ++E L G PFF
Sbjct: 171 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 212
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 20/208 (9%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVF-AERDIMSFTDNPFVVTMY 430
+ G +G VY + A+KK+ + +++Q F E +M+ + +V +
Sbjct: 39 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 431 CSFETKKHLCLVMEYVEGG---DCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVH 487
LCLV Y+ G D S L T PL M + +LH +H
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156
Query: 488 RDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIA 547
RD+K N+L+ K++DFGL++ E+ A+ ++ GT Y+A
Sbjct: 157 RDIKSANILLDEAFTAKISDFGLARAS-------------EKFAQTVMXSRIVGTTAYMA 203
Query: 548 PEVILRQGYGKPVDWWSMGVILYEFLVG 575
PE LR D +S GV+L E + G
Sbjct: 204 PEA-LRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 20/208 (9%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVF-AERDIMSFTDNPFVVTMY 430
+ G +G VY + A+KK+ + +++Q F E +M+ + +V +
Sbjct: 39 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 431 CSFETKKHLCLVMEYVEGG---DCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVH 487
LCLV Y+ G D S L T PL M + +LH +H
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156
Query: 488 RDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIA 547
RD+K N+L+ K++DFGL++ E+ A+ ++ GT Y+A
Sbjct: 157 RDIKSANILLDEAFTAKISDFGLARAS-------------EKFAQTVMXXRIVGTTAYMA 203
Query: 548 PEVILRQGYGKPVDWWSMGVILYEFLVG 575
PE LR D +S GV+L E + G
Sbjct: 204 PEA-LRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 25/234 (10%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQR---FAMKKIIKNSLMLRNQMEQVF 412
+F+K + + + ++I G +G V R K +R A+K + Q
Sbjct: 35 QFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTL--KVGYTEKQRRDFL 92
Query: 413 AERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFA 471
E IM D+P VV + K + +V+E++E G + L K+ G
Sbjct: 93 CEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR 152
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+ YL G VHRDL N+L+ + K++DFGLS++ +E D
Sbjct: 153 GIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV-------------IEDDP 199
Query: 532 KQFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
+ P + APE I + + D WS G++++E + +GE P
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS-----YGERP 248
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 20/208 (9%)
Query: 372 ISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVF-AERDIMSFTDNPFVVTMY 430
+ G +G VY + A+KK+ + +++Q F E +M+ + +V +
Sbjct: 33 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 431 CSFETKKHLCLVMEYVEGG---DCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVH 487
LCLV Y+ G D S L T PL M + +LH +H
Sbjct: 91 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 150
Query: 488 RDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIA 547
RD+K N+L+ K++DFGL++ E+ A+ ++ GT Y+A
Sbjct: 151 RDIKSANILLDEAFTAKISDFGLARAS-------------EKFAQXVMXXRIVGTTAYMA 197
Query: 548 PEVILRQGYGKPVDWWSMGVILYEFLVG 575
PE LR D +S GV+L E + G
Sbjct: 198 PEA-LRGEITPKSDIYSFGVVLLEIITG 224
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 24/222 (10%)
Query: 365 DFTVIKLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFT 421
D + +++ G +G VY HK + A+K K+ + + E+ +E IM
Sbjct: 13 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTL--DNKEKFMSEAVIMKNL 70
Query: 422 DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLL-KNTGPLPADMARFYFAETVLAVEYL 480
D+P +V + E + ++ME G+ L +N L Y + A+ YL
Sbjct: 71 DHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 129
Query: 481 HSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVY 540
S VHRD+ N+L+ + +KL DFGLS+ Y+E + + V
Sbjct: 130 ESINCVHRDIAVRNILVASPECVKLGDFGLSR-------------YIEDE--DYYKASVT 174
Query: 541 GTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFL-VGCVPFF 580
P ++++PE I + + D W V ++E L G PFF
Sbjct: 175 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYL--VRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
+F+K + + + ++I G +G V ++ R+ F K +K+ Q +
Sbjct: 25 EFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT-EKQRRDFLS 83
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK-NTGPLPADMARFYFAE 472
E IM D+P V+ + + ++ E++E G S L+ N G
Sbjct: 84 EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRG 143
Query: 473 TVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
++YL VHRDL N+L+ + K++DFGLS+ ++E D
Sbjct: 144 IAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSR-------------FLEDDTS 190
Query: 533 QFSDKQVYGTP---EYIAPEVILRQGYGKPVDWWSMGVILYEFL-VGCVPFFGETPEELF 588
+ G + APE I + + D WS G++++E + G P++ T +++
Sbjct: 191 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI 250
Query: 589 AHTVNDDIEWPSEDDWP 605
+ + D P D P
Sbjct: 251 -NAIEQDYRLPPPMDCP 266
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 122/288 (42%), Gaps = 30/288 (10%)
Query: 341 TSIESNSDSYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKN 400
TS++ +S +Y DK+ D T+ + G YG VY K+ A+K + ++
Sbjct: 1 TSMDPSSPNY----DKWEM--ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 54
Query: 401 SLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP 460
++ ++E+ E +M +P +V + + +++E++ G+ L+
Sbjct: 55 TM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR 110
Query: 461 LPADMARFYFAETVL--AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSL 518
+ + T + A+EYL +HRDL N L+ +K+ DFGLS+ LM+
Sbjct: 111 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 168
Query: 519 ATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCV 577
T Y +F K + APE + + D W+ GV+L+E G
Sbjct: 169 DT-----YTAHAGAKFPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS 216
Query: 578 PFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
P+ G +++ + D + P +V ++ Q NP DR
Sbjct: 217 PYPGIDLSQVY-ELLEKDYRMERPEGCPEKV--YELMRACWQWNPSDR 261
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 97/244 (39%), Gaps = 55/244 (22%)
Query: 366 FTVIKLISNGAYGSVY-LVRHKETRQRFAMKKIIKNSLMLR-------NQMEQVFAERDI 417
+ ++ + G +G V + H + + A+K II+N R N ++++ E+D
Sbjct: 30 YEIVGNLGEGTFGKVVECLDHARGKSQVALK-IIRNVGKYREAARLEINVLKKI-KEKD- 86
Query: 418 MSFTDNPFV-VTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETV 474
+N F+ V M F H+C+ E + G + LK N P P R +
Sbjct: 87 ---KENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLC 142
Query: 475 LAVEYLHSYGIVHRDLKPDNLLIT-------------------ALGHIKLTDFGLSKMGL 515
A+ +LH + H DLKP+N+L I++ DFG +
Sbjct: 143 HALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH 202
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
T + T Y PEVIL G+ +P D WS+G IL+E+ G
Sbjct: 203 EHHTT------------------IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
Query: 576 CVPF 579
F
Sbjct: 245 FTLF 248
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 108/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+ ++ + + N+ ++ E +
Sbjct: 47 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANK--EILDEAYV 104
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 105 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 162
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFGL+K+ + + K++
Sbjct: 163 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------LGAEEKEYH 209
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 210 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 262
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 127/307 (41%), Gaps = 41/307 (13%)
Query: 338 LTDTSIESNSDSYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI 397
+TD + + S + P +N T+I+ + +GA+G VY Q M
Sbjct: 32 MTDYNPNYSFAGKTSSISDLKEVPRKN-ITLIRGLGHGAFGEVY------EGQVSGMPND 84
Query: 398 IKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY-------CSFETKKHL--CLVMEYVEG 448
+ + +V +E+D + F +++ + C + + L +++E + G
Sbjct: 85 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 144
Query: 449 GDCASLLKNTGPLPADMARFYFAETV-------LAVEYLHSYGIVHRDLKPDNLLITALG 501
GD S L+ T P P+ + + + +YL +HRD+ N L+T G
Sbjct: 145 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 204
Query: 502 HIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPV 560
++ +K+G +A ++Y A + P +++ PE + +
Sbjct: 205 PGRV-----AKIGDFGMARDIYR------ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKT 253
Query: 561 DWWSMGVILYE-FLVGCVPFFGETPEELFAH-TVNDDIEWPSEDDWPIQVEAKSIITDLL 618
D WS GV+L+E F +G +P+ ++ +E+ T ++ P P+ I+T
Sbjct: 254 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIMTQCW 309
Query: 619 QQNPRDR 625
Q P DR
Sbjct: 310 QHQPEDR 316
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 108/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 15 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 72
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFG +K+ + + K++
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL-------------LGAEEKEYH 177
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 97/244 (39%), Gaps = 55/244 (22%)
Query: 366 FTVIKLISNGAYGSVY-LVRHKETRQRFAMKKIIKNSLMLR-------NQMEQVFAERDI 417
+ ++ + G +G V + H + + A+K II+N R N ++++ E+D
Sbjct: 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALK-IIRNVGKYREAARLEINVLKKI-KEKD- 77
Query: 418 MSFTDNPFV-VTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETV 474
+N F+ V M F H+C+ E + G + LK N P P R +
Sbjct: 78 ---KENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLC 133
Query: 475 LAVEYLHSYGIVHRDLKPDNLLIT-------------------ALGHIKLTDFGLSKMGL 515
A+ +LH + H DLKP+N+L I++ DFG +
Sbjct: 134 HALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH 193
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
T + T Y PEVIL G+ +P D WS+G IL+E+ G
Sbjct: 194 EHHTT------------------IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
Query: 576 CVPF 579
F
Sbjct: 236 FTLF 239
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 127/307 (41%), Gaps = 41/307 (13%)
Query: 338 LTDTSIESNSDSYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI 397
+TD + + S + P +N T+I+ + +GA+G VY Q M
Sbjct: 6 MTDYNPNYSFAGKTSSISDLKEVPRKN-ITLIRGLGHGAFGEVY------EGQVSGMPND 58
Query: 398 IKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY-------CSFETKKHL--CLVMEYVEG 448
+ + +V +E+D + F +++ + C + + L +++E + G
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 449 GDCASLLKNTGPLPADMARFYFAETV-------LAVEYLHSYGIVHRDLKPDNLLITALG 501
GD S L+ T P P+ + + + +YL +HRD+ N L+T G
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 178
Query: 502 HIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPV 560
++ +K+G +A ++Y A + P +++ PE + +
Sbjct: 179 PGRV-----AKIGDFGMARDIYR------ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKT 227
Query: 561 DWWSMGVILYE-FLVGCVPFFGETPEELFAH-TVNDDIEWPSEDDWPIQVEAKSIITDLL 618
D WS GV+L+E F +G +P+ ++ +E+ T ++ P P+ I+T
Sbjct: 228 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIMTQCW 283
Query: 619 QQNPRDR 625
Q P DR
Sbjct: 284 QHQPEDR 290
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 127/307 (41%), Gaps = 41/307 (13%)
Query: 338 LTDTSIESNSDSYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI 397
+TD + + S + P +N T+I+ + +GA+G VY Q M
Sbjct: 6 MTDYNPNYSFAGKTSSISDLKEVPRKN-ITLIRGLGHGAFGEVY------EGQVSGMPND 58
Query: 398 IKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY-------CSFETKKHL--CLVMEYVEG 448
+ + +V +E+D + F +++ + C + + L +++E + G
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 449 GDCASLLKNTGPLPADMARFYFAETV-------LAVEYLHSYGIVHRDLKPDNLLITALG 501
GD S L+ T P P+ + + + +YL +HRD+ N L+T G
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 178
Query: 502 HIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPV 560
++ +K+G +A ++Y A + P +++ PE + +
Sbjct: 179 PGRV-----AKIGDFGMAQDIYR------ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKT 227
Query: 561 DWWSMGVILYE-FLVGCVPFFGETPEELFAH-TVNDDIEWPSEDDWPIQVEAKSIITDLL 618
D WS GV+L+E F +G +P+ ++ +E+ T ++ P P+ I+T
Sbjct: 228 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIMTQCW 283
Query: 619 QQNPRDR 625
Q P DR
Sbjct: 284 QHQPEDR 290
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 15 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 72
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLK----NTGPLPADMARFYFA 471
M+ DNP V + C T + L+M+ + G ++ N G + +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIG---SQYLLNWCV 126
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+ + YL +VHRDL N+L+ H+K+TDFG +K+ + +
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL-------------LGAEE 173
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
K++ + +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 23/160 (14%)
Query: 427 VTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFA----ETVLAVEYLHS 482
+ ++ + TK +L +V ++ EG +SL K+ F +T ++YLH+
Sbjct: 94 ILLFMGYMTKDNLAIVTQWCEG---SSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA 150
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
I+HRD+K +N+ + +K+ DFGL+ + R + +Q G+
Sbjct: 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK-------------SRWSGSQQVEQPTGS 197
Query: 543 PEYIAPEVILRQG---YGKPVDWWSMGVILYEFLVGCVPF 579
++APEVI Q + D +S G++LYE + G +P+
Sbjct: 198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 97/244 (39%), Gaps = 55/244 (22%)
Query: 366 FTVIKLISNGAYGSVY-LVRHKETRQRFAMKKIIKNSLMLR-------NQMEQVFAERDI 417
+ ++ + G +G V + H + + A+K II+N R N ++++ E+D
Sbjct: 53 YEIVGNLGEGTFGKVVECLDHARGKSQVALK-IIRNVGKYREAARLEINVLKKI-KEKD- 109
Query: 418 MSFTDNPFV-VTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETV 474
+N F+ V M F H+C+ E + G + LK N P P R +
Sbjct: 110 ---KENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLC 165
Query: 475 LAVEYLHSYGIVHRDLKPDNLLIT-------------------ALGHIKLTDFGLSKMGL 515
A+ +LH + H DLKP+N+L I++ DFG +
Sbjct: 166 HALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH 225
Query: 516 MSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVG 575
T + T Y PEVIL G+ +P D WS+G IL+E+ G
Sbjct: 226 EHHTT------------------IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
Query: 576 CVPF 579
F
Sbjct: 268 FTLF 271
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 125/301 (41%), Gaps = 46/301 (15%)
Query: 349 SYC-----SKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
+YC S + P +N T+I+ + +GA+G VY Q M +
Sbjct: 11 NYCFAGKTSSISDLKEVPRKN-ITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQV 63
Query: 404 LRNQMEQVFAERDIMSFTDNPFVVTMY-------CSFETKKHL--CLVMEYVEGGDCASL 454
+ +V +E+D + F +++ + C + + L +++E + GGD S
Sbjct: 64 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 123
Query: 455 LKNTGPLPADMARFYFAETV-------LAVEYLHSYGIVHRDLKPDNLLITALGHIKLTD 507
L+ T P P+ + + + +YL +HRD+ N L+T G ++
Sbjct: 124 LRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV-- 181
Query: 508 FGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMG 566
+K+G +A ++Y A + P +++ PE + + D WS G
Sbjct: 182 ---AKIGDFGMARDIYR------ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 232
Query: 567 VILYE-FLVGCVPFFGETPEELFAH-TVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRD 624
V+L+E F +G +P+ ++ +E+ T ++ P P+ I+T Q P D
Sbjct: 233 VLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIMTQCWQHQPED 288
Query: 625 R 625
R
Sbjct: 289 R 289
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 24/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 68
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETVLAVEYLH 481
P +V + + +++E++ G+ L+ N + A + + + A+EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK---- 177
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPS 600
+ APE + + D W+ GV+L+E G P+ G +++ + D
Sbjct: 178 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMER 233
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 234 PEGCPEKV--YELMRACWQWNPSDR 256
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 127/307 (41%), Gaps = 41/307 (13%)
Query: 338 LTDTSIESNSDSYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI 397
+TD + + S + P +N T+I+ + +GA+G VY Q M
Sbjct: 12 MTDYNPNYSFAGKTSSISDLKEVPRKN-ITLIRGLGHGAFGEVY------EGQVSGMPND 64
Query: 398 IKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMY-------CSFETKKHL--CLVMEYVEG 448
+ + +V +E+D + F +++ + C + + L +++E + G
Sbjct: 65 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 124
Query: 449 GDCASLLKNTGPLPADMARFYFAETV-------LAVEYLHSYGIVHRDLKPDNLLITALG 501
GD S L+ T P P+ + + + +YL +HRD+ N L+T G
Sbjct: 125 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 184
Query: 502 HIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPV 560
++ +K+G +A ++Y A + P +++ PE + +
Sbjct: 185 PGRV-----AKIGDFGMARDIYR------ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKT 233
Query: 561 DWWSMGVILYE-FLVGCVPFFGETPEELFAH-TVNDDIEWPSEDDWPIQVEAKSIITDLL 618
D WS GV+L+E F +G +P+ ++ +E+ T ++ P P+ I+T
Sbjct: 234 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIMTQCW 289
Query: 619 QQNPRDR 625
Q P DR
Sbjct: 290 QHQPEDR 296
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 108/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 70
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFG +K+ + + K++
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL-------------LGAEEKEYH 175
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 24/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 68
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETVLAVEYLH 481
P +V + + +++E++ G+ L+ N + A + + + A+EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK---- 177
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPS 600
+ APE + + D W+ GV+L+E G P+ G +++ + D
Sbjct: 178 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMER 233
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 234 PEGCPEKV--YELMRACWQWNPSDR 256
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 17 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 74
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLK----NTGPLPADMARFYFA 471
M+ DNP V + C T + L+M+ + G ++ N G + +
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIG---SQYLLNWCV 128
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+ + YL +VHRDL N+L+ H+K+TDFG +K+ + +
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL-------------LGAEE 175
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
K++ + +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 176 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 232
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 108/233 (46%), Gaps = 24/233 (10%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 20 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 77
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL 475
M+ DNP V + C T + + +M + G + ++ + + + +
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+ YL +VHRDL N+L+ H+K+TDFG +K+ + + K++
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL-------------LGAEEKEYH 182
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
+ +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 183 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 362 NENDFTVIKLISNGAYGSVY----LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E +F IK++ +GA+G+VY + ++ + A+K++ + + N+ ++ E +
Sbjct: 15 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYV 72
Query: 418 MSFTDNPFVVTMY--CSFETKKHLCLVMEYVEGGDCASLLK----NTGPLPADMARFYFA 471
M+ DNP V + C T + L+M+ + G ++ N G + +
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIG---SQYLLNWCV 126
Query: 472 ETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+ + YL +VHRDL N+L+ H+K+TDFG +K+ + +
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL-------------LGAEE 173
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
K++ + +++A E IL + Y D WS GV ++E + G P+ G E+
Sbjct: 174 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 125/301 (41%), Gaps = 46/301 (15%)
Query: 349 SYC-----SKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLM 403
+YC S + P +N T+I+ + +GA+G VY Q M +
Sbjct: 3 NYCFAGKTSSISDLKEVPRKN-ITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQV 55
Query: 404 LRNQMEQVFAERDIMSFTDNPFVVTMY-------CSFETKKHL--CLVMEYVEGGDCASL 454
+ +V +E+D + F +++ + C + + L +++E + GGD S
Sbjct: 56 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSF 115
Query: 455 LKNTGPLPADMARFYFAETV-------LAVEYLHSYGIVHRDLKPDNLLITALGHIKLTD 507
L+ T P P+ + + + +YL +HRD+ N L+T G ++
Sbjct: 116 LRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV-- 173
Query: 508 FGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMG 566
+K+G +A ++Y A + P +++ PE + + D WS G
Sbjct: 174 ---AKIGDFGMARDIYR------ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 224
Query: 567 VILYE-FLVGCVPFFGETPEELFAH-TVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRD 624
V+L+E F +G +P+ ++ +E+ T ++ P P+ I+T Q P D
Sbjct: 225 VLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIMTQCWQHQPED 280
Query: 625 R 625
R
Sbjct: 281 R 281
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 30/288 (10%)
Query: 341 TSIESNSDSYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKN 400
TS++ +S +Y DK+ D T+ + G YG VY K+ A+K + ++
Sbjct: 1 TSMDPSSPNY----DKWEM--ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 54
Query: 401 SLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP 460
++ ++E+ E +M +P +V + + ++ E++ G+ L+
Sbjct: 55 TM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 110
Query: 461 LPADMARFYFAETVL--AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSL 518
+ + T + A+EYL +HRDL N L+ +K+ DFGLS+ LM+
Sbjct: 111 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 168
Query: 519 ATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCV 577
T Y +F K + APE + + D W+ GV+L+E G
Sbjct: 169 DT-----YTAHAGAKFPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS 216
Query: 578 PFFGETPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDR 625
P+ G +++ + D + P +V ++ Q NP DR
Sbjct: 217 PYPGIDLSQVY-ELLEKDYRMERPEGCPEKV--YELMRACWQWNPSDR 261
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 46/306 (15%)
Query: 344 ESNSDSYC-----SKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKII 398
+ ++ +YC S + P +N T+I+ + +GA+G VY Q M
Sbjct: 21 QGSNPNYCFAGKTSSISDLKEVPRKN-ITLIRGLGHGAFGEVY------EGQVSGMPNDP 73
Query: 399 KNSLMLRNQMEQVFAERDIMSFTDNPFVVT-------MYCSFETKKHL--CLVMEYVEGG 449
+ + +V +E+D + F +++ + C + + L +++E + GG
Sbjct: 74 SPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGG 133
Query: 450 DCASLLKNTGPLPADMARFYFAETV-------LAVEYLHSYGIVHRDLKPDNLLITALGH 502
D S L+ T P P+ + + + +YL +HRD+ N L+T G
Sbjct: 134 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGP 193
Query: 503 IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPVD 561
++ +K+G +A ++Y A + P +++ PE + + D
Sbjct: 194 GRV-----AKIGDFGMARDIYR------ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 242
Query: 562 WWSMGVILYE-FLVGCVPFFGETPEELFAH-TVNDDIEWPSEDDWPIQVEAKSIITDLLQ 619
WS GV+L+E F +G +P+ ++ +E+ T ++ P P+ I+T Q
Sbjct: 243 TWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIMTQCWQ 298
Query: 620 QNPRDR 625
P DR
Sbjct: 299 HQPEDR 304
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 105/233 (45%), Gaps = 24/233 (10%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E +++ + G +G V++ + + A+K + + S+ + AE ++M
Sbjct: 19 EVPRET-LKLVERLGAGQFGEVWM-GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLM 72
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY--FAETVLA 476
+ +V +Y T++ + ++ EY+E G LK + + + A+
Sbjct: 73 KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 131
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ ++ +HRDL+ N+L++ K+ DFGL+++ + N Y R+ +F
Sbjct: 132 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL----IEDNEYTA---REGAKFPI 184
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
K + APE I + D WS G++L E + G +P+ G T E+
Sbjct: 185 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 230
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 24/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 73
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETVLAVEYLH 481
P +V + + ++ E++ G+ L+ N + A + + + A+EYL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK---- 182
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPS 600
+ APE + + D W+ GV+L+E G P+ G +++ + D
Sbjct: 183 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMER 238
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 239 PEGCPEKV--YELMRACWQWNPSDR 261
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 21/220 (9%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +P
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 276
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETVLAVEYLHS 482
+V + + ++ E++ G+ L+ N + A + + + A+EYL
Sbjct: 277 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 336
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
+HR+L N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 337 KNFIHRNLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK----- 384
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFG 581
+ APE + + D W+ GV+L+E G P+ G
Sbjct: 385 --WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 422
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 104/224 (46%), Gaps = 27/224 (12%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
K + G +G V++ + + + A+K + S+ +E AE ++M + +V +
Sbjct: 194 KKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKL 248
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKN----TGPLPADMARFYFAETVLAVEYLHSYGI 485
+ TK+ + ++ E++ G LK+ PLP + + A+ + ++
Sbjct: 249 HAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEGMAFIEQRNY 305
Query: 486 VHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
+HRDL+ N+L++A K+ DFGL+++ + N Y R+ +F K +
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARV----IEDNEYTA---REGAKFPIK-------W 351
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
APE I + D WS G++L E + G +P+ G + E+
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 24/264 (9%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +P
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 315
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL--AVEYLHS 482
+V + + ++ E++ G+ L+ + + T + A+EYL
Sbjct: 316 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 375
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
+HR+L N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 376 KNFIHRNLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK----- 423
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPSE 601
+ APE + + D W+ GV+L+E G P+ G +++ + D
Sbjct: 424 --WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMERP 480
Query: 602 DDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 481 EGCPEKV--YELMRACWQWNPSDR 502
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E +++ + G +G V++ + + A+K + + S+ + AE ++M
Sbjct: 15 EVPRET-LKLVERLGAGQFGEVWM-GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLM 68
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY--FAETVLA 476
+ +V +Y T++ + ++ EY+E G LK + + + A+
Sbjct: 69 KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 127
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ ++ +HRDL+ N+L++ K+ DFGL+++ + N Y R+ +F
Sbjct: 128 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL----IEDNEYTA---REGAKFPI 180
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAH 590
K + APE I + D WS G++L E + G +P+ G T E+ +
Sbjct: 181 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 228
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 104/224 (46%), Gaps = 27/224 (12%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
K + G +G V++ + + + A+K + S+ +E AE ++M + +V +
Sbjct: 21 KKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKL 75
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKN----TGPLPADMARFYFAETVLAVEYLHSYGI 485
+ TK+ + ++ E++ G LK+ PLP + + A+ + ++
Sbjct: 76 HAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEGMAFIEQRNY 132
Query: 486 VHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
+HRDL+ N+L++A K+ DFGL+++ + N Y R+ +F K +
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARV----IEDNEYTA---REGAKFPIK-------W 178
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
APE I + D WS G++L E + G +P+ G + E+
Sbjct: 179 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E +++ + G +G V++ + + A+K + + S+ + AE ++M
Sbjct: 14 EVPRET-LKLVERLGAGQFGEVWM-GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLM 67
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY--FAETVLA 476
+ +V +Y T++ + ++ EY+E G LK + + + A+
Sbjct: 68 KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 126
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ ++ +HRDL+ N+L++ K+ DFGL+++ + N Y R+ +F
Sbjct: 127 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL----IEDNEYTA---REGAKFPI 179
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAH 590
K + APE I + D WS G++L E + G +P+ G T E+ +
Sbjct: 180 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 227
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 127/307 (41%), Gaps = 41/307 (13%)
Query: 338 LTDTSIESNSDSYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI 397
+TD + + S + P +N T+I+ + +GA+G VY Q M
Sbjct: 6 MTDYNPNYSFAGKTSSISDLKEVPRKN-ITLIRGLGHGAFGEVY------EGQVSGMPND 58
Query: 398 IKNSLMLRNQMEQVFAERDIMSFTDNPFVVT-------MYCSFETKKHL--CLVMEYVEG 448
+ + +V +E+D + F +++ + C + + L +++E + G
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 449 GDCASLLKNTGPLPADMARFYFAETV-------LAVEYLHSYGIVHRDLKPDNLLITALG 501
GD S L+ T P P+ + + + +YL +HRD+ N L+T G
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 178
Query: 502 HIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP-EYIAPEVILRQGYGKPV 560
++ +K+G +A ++Y A + P +++ PE + +
Sbjct: 179 PGRV-----AKIGDFGMARDIYR------ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKT 227
Query: 561 DWWSMGVILYE-FLVGCVPFFGETPEELFAH-TVNDDIEWPSEDDWPIQVEAKSIITDLL 618
D WS GV+L+E F +G +P+ ++ +E+ T ++ P P+ I+T
Sbjct: 228 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIMTQCW 283
Query: 619 QQNPRDR 625
Q P DR
Sbjct: 284 QHQPEDR 290
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 24/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 68
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETVLAVEYLH 481
P +V + + ++ E++ G+ L+ N + A + + + A+EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK---- 177
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPS 600
+ APE + + D W+ GV+L+E G P+ G +++ + D
Sbjct: 178 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMER 233
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 234 PEGCPEKV--YELMRACWQWNPSDR 256
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 368 VIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVV 427
++K + G +G V++ + + + A+K + ++ ++ +E E ++M + +V
Sbjct: 17 LVKRLGAGQFGEVWMGYYNNS-TKVAVKTLKPGTMSVQAFLE----EANLMKTLQHDKLV 71
Query: 428 TMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF--YFAETVLAVEYLHSYGI 485
+Y ++ + ++ EY+ G LK+ + + + A+ + Y+
Sbjct: 72 RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 131
Query: 486 VHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
+HRDL+ N+L++ K+ DFGL+++ + N Y R+ +F K +
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARV----IEDNEYTA---REGAKFPIK-------W 177
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGET 583
APE I + D WS G++LYE + G +P+ G T
Sbjct: 178 TAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRT 216
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 24/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 72
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL--AVEYLH 481
P +V + + ++ E++ G+ L+ + + T + A+EYL
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK---- 181
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPS 600
+ APE + + D W+ GV+L+E G P+ G +++ + D
Sbjct: 182 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMER 237
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 238 PEGCPEKV--YELMRACWQWNPSDR 260
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 24/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 68
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETVLAVEYLH 481
P +V + + ++ E++ G+ L+ N + A + + + A+EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK---- 177
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPS 600
+ APE + + D W+ GV+L+E G P+ G +++ + D
Sbjct: 178 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMER 233
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 234 PEGCPEKV--YELMRACWQWNPSDR 256
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 21/221 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 73
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL--AVEYLH 481
P +V + + ++ E++ G+ L+ + + T + A+EYL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK---- 182
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFG 581
+ APE + + D W+ GV+L+E G P+ G
Sbjct: 183 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 98/235 (41%), Gaps = 25/235 (10%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHKE--TRQRFAMKKIIKNSLMLRNQMEQVFA 413
+F+K + + + ++I G +G V R K ++ K +K R Q + +
Sbjct: 8 EFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER-QRREFLS 66
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK-NTGPLPADMARFYFAE 472
E IM ++P ++ + + ++ E++E G S L+ N G
Sbjct: 67 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG 126
Query: 473 TVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
+ YL VHRDL N+L+ + K++DFGLS+ ++E ++
Sbjct: 127 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSR-------------FLEENSS 173
Query: 533 QFSDKQVYGTP---EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
++ G + APE I + + D WS G++++E + FGE P
Sbjct: 174 DPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS-----FGERP 223
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 28/235 (11%)
Query: 357 FSKTPN-------ENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQME 409
F +PN D T+ + G YG VY K+ A+K + ++++ ++E
Sbjct: 12 FQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVE 67
Query: 410 QVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY 469
+ E +M +P +V + + ++ E++ G+ L+ +
Sbjct: 68 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 127
Query: 470 FAETVL--AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
+ T + A+EYL +HRDL N L+ +K+ DFGLS+ LM+ T Y
Sbjct: 128 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YT 180
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFG 581
+F K + APE + + D W+ GV+L+E G P+ G
Sbjct: 181 AHAGAKFPIK-------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 228
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 24/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 70
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL--AVEYLH 481
P +V + + ++ E++ G+ L+ + + T + A+EYL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK---- 179
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPS 600
+ APE + + D W+ GV+L+E G P+ G +++ + D
Sbjct: 180 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMER 235
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 236 PEGCPEKV--YELMRACWQWNPSDR 258
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 105/233 (45%), Gaps = 24/233 (10%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E +++ + G +G V++ + + A+K + + S+ + AE ++M
Sbjct: 9 EVPRET-LKLVERLGAGQFGEVWM-GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLM 62
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY--FAETVLA 476
+ +V +Y T++ + ++ EY+E G LK + + + A+
Sbjct: 63 KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ ++ +HRDL+ N+L++ K+ DFGL+++ + N Y R+ +F
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL----IEDNEYTA---REGAKFPI 174
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
K + APE I + D WS G++L E + G +P+ G T E+
Sbjct: 175 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 24/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G +G VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 66
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETVLAVEYLH 481
P +V + + ++ E++ G+ L+ N + A + + + A+EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T +F K
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTX-----TAHAGAKFPIK---- 175
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPS 600
+ APE + + D W+ GV+L+E G P+ G P +++ + D
Sbjct: 176 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVY-ELLEKDYRMER 231
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 232 PEGCPEKV--YELMRACWQWNPSDR 254
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 105/233 (45%), Gaps = 24/233 (10%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E +++ + G +G V++ + + A+K + + S+ + AE ++M
Sbjct: 4 EVPRET-LKLVERLGAGQFGEVWM-GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLM 57
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY--FAETVLA 476
+ +V +Y T++ + ++ EY+E G LK + + + A+
Sbjct: 58 KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 116
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ ++ +HRDL+ N+L++ K+ DFGL+++ + N Y R+ +F
Sbjct: 117 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL----IEDNEYTA---REGAKFPI 169
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
K + APE I + D WS G++L E + G +P+ G T E+
Sbjct: 170 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 215
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 21/220 (9%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +P
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 273
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--NTGPLPADMARFYFAETVLAVEYLHS 482
+V + + ++ E++ G+ L+ N + A + + + A+EYL
Sbjct: 274 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 333
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
+HR+L N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 334 KNFIHRNLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK----- 381
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFG 581
+ APE + + D W+ GV+L+E G P+ G
Sbjct: 382 --WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 419
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
E+ E M D+P +V + T+ + ++ME G+ S L+ D+A
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ-VRKFSLDLASL 493
Query: 469 --YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECY 526
Y + A+ YL S VHRD+ N+L++A +KL DFGLS+ Y
Sbjct: 494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR-------------Y 540
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPE 585
+E D+ + + +++APE I + + D W GV ++E L+ G PF G
Sbjct: 541 ME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
Query: 586 ELFAHTVNDD 595
++ N +
Sbjct: 600 DVIGRIENGE 609
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 24/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 68
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL--AVEYLH 481
P +V + + ++ E++ G+ L+ + + T + A+EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK---- 177
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPS 600
+ APE + + D W+ GV+L+E G P+ G +++ + D
Sbjct: 178 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMER 233
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 234 PEGCPEKV--YELMRACWQWNPSDR 256
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 21/221 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 70
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL--AVEYLH 481
P +V + + ++ E++ G+ L+ + + T + A+EYL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK---- 179
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFG 581
+ APE + + D W+ GV+L+E G P+ G
Sbjct: 180 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 217
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 24/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 68
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL--AVEYLH 481
P +V + + ++ E++ G+ L+ + + T + A+EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAHAGAKFPIK---- 177
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPS 600
+ APE + + D W+ GV+L+E G P+ G +++ + D
Sbjct: 178 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMER 233
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 234 PEGCPEKV--YELMRACWQWNPSDR 256
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 24/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 70
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL--AVEYLH 481
P +V + + ++ E++ G+ L+ + + T + A+EYL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAPAGAKFPIK---- 179
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPS 600
+ APE + + D W+ GV+L+E G P+ G +++ + D
Sbjct: 180 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMER 235
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 236 PEGCPEKV--YELMRACWQWNPSDR 258
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
E+ E M D+P +V + T+ + ++ME G+ S L+ D+A
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQ-VRKFSLDLASL 113
Query: 469 --YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECY 526
Y + A+ YL S VHRD+ N+L++A +KL DFGLS+ Y
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR-------------Y 160
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPE 585
+E D+ + + +++APE I + + D W GV ++E L+ G PF G
Sbjct: 161 ME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
Query: 586 ELFAHTVNDD 595
++ N +
Sbjct: 220 DVIGRIENGE 229
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 21/221 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 69
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL--AVEYLH 481
P +V + + ++ E++ G+ L+ + + T + A+EYL
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T Y +F K
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT-----YTAPAGAKFPIK---- 178
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFG 581
+ APE + + D W+ GV+L+E G P+ G
Sbjct: 179 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 58/237 (24%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLIT- 498
LV EY+ D L + RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 111 ALVFEYINNTDFKQLYQILTDFDI---RFYMYELLKALDYCHSKGIMHRDVKPHNVMIDH 167
Query: 499 ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ + N+ R A ++ + PE+++ Q Y
Sbjct: 168 QQKKLRLIDWGLAEFYHPAQEYNV------RVASRY----------FKGPELLVDYQMYD 211
Query: 558 KPVDWWSMGVILYEFLVGCVPFF-GE-------------TPEELFAHT----------VN 593
+D WS+G +L + PFF G+ EEL+ + N
Sbjct: 212 YSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFN 271
Query: 594 DDIEWPSEDDWP----------IQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
D + S W + EA ++ LL+ + + RL E EHPYF
Sbjct: 272 DILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK---EAMEHPYF 325
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 65
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D + F
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEFFK 172
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 103/253 (40%), Gaps = 25/253 (9%)
Query: 363 ENDFTVIKL---ISNGAYGSVYL--VRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDI 417
E D + +K+ I G +G V ++ R+ F K +K+ Q +E I
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT-EKQRRDFLSEASI 61
Query: 418 MSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK-NTGPLPADMARFYFAETVLA 476
M D+P V+ + + ++ E++E G S L+ N G
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 121
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
++YL VHR L N+L+ + K++DFGLS+ ++E D +
Sbjct: 122 MKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSR-------------FLEDDTSDPTY 168
Query: 537 KQVYGTP---EYIAPEVILRQGYGKPVDWWSMGVILYEFL-VGCVPFFGETPEELFAHTV 592
G + APE I + + D WS G++++E + G P++ T +++ + +
Sbjct: 169 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI-NAI 227
Query: 593 NDDIEWPSEDDWP 605
D P D P
Sbjct: 228 EQDYRLPPPMDCP 240
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 101/245 (41%), Gaps = 38/245 (15%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRF--AMKKIIKNSLMLRNQMEQVFAERDIM-SF 420
ND +I G +G V R K+ R A+K++ ++ E +++
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCKL 72
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMA-------------- 466
+P ++ + + E + +L L +EY G+ L+ + L D A
Sbjct: 73 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 467 --RFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYE 524
+ A+ ++YL +HRDL N+L+ K+ DFGLS+ E
Sbjct: 133 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQ---------E 183
Query: 525 CYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFL-VGCVPFFGET 583
YV++ + + ++A E + Y D WS GV+L+E + +G P+ G T
Sbjct: 184 VYVKKTMGRLPVR-------WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 236
Query: 584 PEELF 588
EL+
Sbjct: 237 CAELY 241
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 21/221 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 69
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL--AVEYLH 481
P +V + + +++E++ G+ L+ + + T + A+EYL
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T +F K
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTX-----TAHAGAKFPIK---- 178
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFG 581
+ APE + + D W+ GV+L+E G P+ G
Sbjct: 179 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 31/261 (11%)
Query: 379 SVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVF-AERDIMSFTDNPFVVTMYCSFETKK 437
+V L R+K T + +++I N N+M E + ++P +V +F
Sbjct: 26 TVNLARYKPTGEYVTVRRI--NLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN 83
Query: 438 HLCLVMEYVEGGD-----CASLLKNTGPLPADMARFYFAETVL-AVEYLHSYGIVHRDLK 491
L +V ++ G C + ++A Y + VL A++Y+H G VHR +K
Sbjct: 84 ELWVVTSFMAYGSAKDLICTHFMDGMN----ELAIAYILQGVLKALDYIHHMGYVHRSVK 139
Query: 492 PDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI 551
++LI+ G + L+ GL S + + +R F V P +++PEV+
Sbjct: 140 ASHILISVDGKVYLS-------GLRSNLSMISHGQRQRVVHDFPKYSVKVLP-WLSPEVL 191
Query: 552 LR--QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVE 609
+ QGY D +S+G+ E G VPF ++ +N + P ++
Sbjct: 192 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTV--------PCLLD 243
Query: 610 AKSIITDLLQQNPRDRLGTGG 630
+I + L +P + G
Sbjct: 244 TSTIPAEELTMSPSRSVANSG 264
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 101/245 (41%), Gaps = 38/245 (15%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRF--AMKKIIKNSLMLRNQMEQVFAERDIM-SF 420
ND +I G +G V R K+ R A+K++ ++ E +++
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCKL 82
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMA-------------- 466
+P ++ + + E + +L L +EY G+ L+ + L D A
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 467 --RFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYE 524
+ A+ ++YL +HRDL N+L+ K+ DFGLS+ E
Sbjct: 143 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG---------QE 193
Query: 525 CYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFL-VGCVPFFGET 583
YV++ + + ++A E + Y D WS GV+L+E + +G P+ G T
Sbjct: 194 VYVKKTMGRLPVR-------WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 246
Query: 584 PEELF 588
EL+
Sbjct: 247 CAELY 251
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 105/233 (45%), Gaps = 24/233 (10%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E +++ + G +G V++ + + A+K + + S+ + AE ++M
Sbjct: 5 EVPRET-LKLVERLGAGQFGEVWM-GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLM 58
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY--FAETVLA 476
+ +V +Y T++ + ++ EY+E G LK + + + A+
Sbjct: 59 KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 117
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ ++ +HR+L+ N+L++ K+ DFGL+++ + N Y R+ +F
Sbjct: 118 MAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARL----IEDNEYTA---REGAKFPI 170
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
K + APE I + D WS G++L E + G +P+ G T E+
Sbjct: 171 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 216
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 34/267 (12%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+IK + NG +G V++ + A+K + ++ E E IM +
Sbjct: 11 LQLIKRLGNGQFGEVWMGTWN-GNTKVAIKTLKPGTM----SPESFLEEAQIMKKLKHDK 65
Query: 426 VVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG------PLPADMARFYFAETVLAVEY 479
+V +Y +++ + +V EY+ G LK+ P DMA A+ + Y
Sbjct: 66 LVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMA----AQVAAGMAY 120
Query: 480 LHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQV 539
+ +HRDL+ N+L+ K+ DFGL+++ + N E A+Q + +
Sbjct: 121 IERMNYIHRDLRSANILVGNGLICKIADFGLARL----IEDN------EXTARQGAKFPI 170
Query: 540 YGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEW 598
++ APE L + D WS G++L E + G VP+ G E+ V
Sbjct: 171 ----KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ-VERGYRM 225
Query: 599 PSEDDWPIQVEAKSIITDLLQQNPRDR 625
P D PI + ++ +++P +R
Sbjct: 226 PCPQDCPISLH--ELMIHCWKKDPEER 250
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 60/238 (25%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADM-ARFYFAETVLAVEYLHSYGIVHRDLKPDNLLIT 498
LV EY+ D L + + D RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 116 ALVFEYINNTDFKQLYQ----ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 171
Query: 499 -ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGY 556
++L D+GL++ + N+ R A ++ + PE+++ Q Y
Sbjct: 172 HQQKKLRLIDWGLAEFYHPAQEYNV------RVASRY----------FKGPELLVDYQMY 215
Query: 557 GKPVDWWSMGVILYEFLVGCVPFF-GE-------------TPEELFAHT----------V 592
+D WS+G +L + PFF G+ EEL+ +
Sbjct: 216 DYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHF 275
Query: 593 NDDIEWPSEDDWP----------IQVEAKSIITDLLQQNPRDRLGTGGPHEVKEHPYF 640
ND + S W + EA ++ LL+ + + RL E EHPYF
Sbjct: 276 NDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK---EAMEHPYF 330
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 104/259 (40%), Gaps = 27/259 (10%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQV--FA 413
KF+ + + T K+I G +G VY K + + + IK + ++V
Sbjct: 36 KFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLG 95
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNT-GPLPADMARFYFAE 472
E IM + ++ + K + ++ EY+E G L+ G
Sbjct: 96 EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRG 155
Query: 473 TVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
++YL + VHRDL N+L+ + K++DFGLS++ +E D +
Sbjct: 156 IAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV-------------LEDDPE 202
Query: 533 QFSDKQVYGTP-EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP-EELFAH 590
P + APE I + + D WS G++++E + +GE P EL H
Sbjct: 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT-----YGERPYWELSNH 257
Query: 591 ----TVNDDIEWPSEDDWP 605
+ND P+ D P
Sbjct: 258 EVMKAINDGFRLPTPMDCP 276
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E +++ + G +G V++ + + A+K + + S+ + AE ++M
Sbjct: 15 EVPRET-LKLVERLGAGQFGEVWM-GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLM 68
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY--FAETVLA 476
+ +V +Y T++ + ++ EY+E G LK + + + A+
Sbjct: 69 KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 127
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ ++ +HRDL+ N+L++ K+ DFGL+++ + T R+ +F
Sbjct: 128 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKFPI 180
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAH 590
K + APE I + D WS G++L E + G +P+ G T E+ +
Sbjct: 181 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 228
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 32/225 (14%)
Query: 362 NENDFTVIKLISNGAYGSVYLVRHKETRQRFAMK--KIIKNSLMLR--NQMEQVFAERDI 417
N++D+ +++ + G Y V+ + ++ +K K +K + + R +E + +I
Sbjct: 35 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNI 94
Query: 418 MSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAV 477
++ D + LV E+V D L + L RFY E + A+
Sbjct: 95 ITLAD-------IVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKAL 144
Query: 478 EYLHSYGIVHRDLKPDNLLIT-ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+Y HS GI+HRD+KP N++I ++L D+GL++ N+ R A ++
Sbjct: 145 DYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV------RVASRY-- 196
Query: 537 KQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFF 580
+ PE+++ Q Y +D WS+G +L + PFF
Sbjct: 197 --------FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E +++ + G +G V++ + + A+K + + S+ + AE ++M
Sbjct: 17 EVPRET-LKLVERLGAGQFGEVWM-GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLM 70
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY--FAETVLA 476
+ +V +Y T++ + ++ EY+E G LK + + + A+
Sbjct: 71 KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 129
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ ++ +HRDL+ N+L++ K+ DFGL+++ + T R+ +F
Sbjct: 130 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKFPI 182
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAH 590
K + APE I + D WS G++L E + G +P+ G T E+ +
Sbjct: 183 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 230
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 27/230 (11%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMK-KIIKNSLMLRNQMEQVFAERDIMSFTD 422
D T +K + G +G +V++ + R ++ + K+IK M ++ E +M
Sbjct: 24 KDLTFLKELGTGQFG---VVKYGKWRGQYDVAIKMIKEGSMSEDEF---IEEAKVMMNLS 77
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL-AVEYLH 481
+ +V +Y ++ + ++ EY+ G + L+ + V A+EYL
Sbjct: 78 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 137
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
S +HRDL N L+ G +K++DFGLS+ YV D + S +
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-------------YVLDDEETSSVGSKFP 184
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
+ PEV++ + D W+ GV+++E + G+ P E F ++
Sbjct: 185 V-RWSPPEVLMYSKFSSKSDIWAFGVLMWE-----IYSLGKMPYERFTNS 228
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 31/261 (11%)
Query: 379 SVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVF-AERDIMSFTDNPFVVTMYCSFETKK 437
+V L R+K T + +++I N N+M E + ++P +V +F
Sbjct: 42 TVNLARYKPTGEYVTVRRI--NLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN 99
Query: 438 HLCLVMEYVEGGD-----CASLLKNTGPLPADMARFYFAETVL-AVEYLHSYGIVHRDLK 491
L +V ++ G C + ++A Y + VL A++Y+H G VHR +K
Sbjct: 100 ELWVVTSFMAYGSAKDLICTHFMDGMN----ELAIAYILQGVLKALDYIHHMGYVHRSVK 155
Query: 492 PDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVI 551
++LI+ G + L+ GL S + + +R F V P +++PEV+
Sbjct: 156 ASHILISVDGKVYLS-------GLRSNLSMISHGQRQRVVHDFPKYSVKVLP-WLSPEVL 207
Query: 552 LR--QGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHTVNDDIEWPSEDDWPIQVE 609
+ QGY D +S+G+ E G VPF ++ +N + P ++
Sbjct: 208 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTV--------PCLLD 259
Query: 610 AKSIITDLLQQNPRDRLGTGG 630
+I + L +P + G
Sbjct: 260 TSTIPAEELTMSPSRSVANSG 280
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 27/230 (11%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMK-KIIKNSLMLRNQMEQVFAERDIMSFTD 422
D T +K + G +G +V++ + R ++ + K+IK M ++ E +M
Sbjct: 9 KDLTFLKELGTGQFG---VVKYGKWRGQYDVAIKMIKEGSMSEDEF---IEEAKVMMNLS 62
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL-AVEYLH 481
+ +V +Y ++ + ++ EY+ G + L+ + V A+EYL
Sbjct: 63 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 122
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
S +HRDL N L+ G +K++DFGLS+ L E + + S V
Sbjct: 123 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD----------EYTSSRGSKFPVRW 172
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
+P PEV++ + D W+ GV+++E + G+ P E F ++
Sbjct: 173 SP----PEVLMYSKFSSKSDIWAFGVLMWE-----IYSLGKMPYERFTNS 213
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
E+ E M D+P +V + T+ + ++ME G+ S L+ D+A
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ-VRKFSLDLASL 493
Query: 469 --YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECY 526
Y + A+ YL S VHRD+ N+L+++ +KL DFGLS+ Y
Sbjct: 494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-------------Y 540
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPE 585
+E D+ + + +++APE I + + D W GV ++E L+ G PF G
Sbjct: 541 ME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
Query: 586 ELFAHTVNDD 595
++ N +
Sbjct: 600 DVIGRIENGE 609
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E +++ + G +G V++ + + A+K + + S+ + AE ++M
Sbjct: 18 EVPRET-LKLVERLGAGQFGEVWM-GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLM 71
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY--FAETVLA 476
+ +V +Y T++ + ++ EY+E G LK + + + A+
Sbjct: 72 KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 130
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ ++ +HRDL+ N+L++ K+ DFGL+++ + T R+ +F
Sbjct: 131 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKFPI 183
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAH 590
K + APE I + D WS G++L E + G +P+ G T E+ +
Sbjct: 184 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 231
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E +++ + G +G V++ + + A+K + + S+ + AE ++M
Sbjct: 9 EVPRET-LKLVERLGAGQFGEVWM-GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLM 62
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY--FAETVLA 476
+ +V +Y T++ + ++ EY+E G LK + + + A+
Sbjct: 63 KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ ++ +HRDL+ N+L++ K+ DFGL+++ + T R+ +F
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKFPI 174
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAH 590
K + APE I + D WS G++L E + G +P+ G T E+ +
Sbjct: 175 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 104/248 (41%), Gaps = 36/248 (14%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ-----MEQVFAERDIM 418
+ T+ K + GA+G V + + + + ML++ + + +E ++M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 419 SFTD-NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP-----------LPADMA 466
+ ++T+ + L +++EY G+ L+ P +P +
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 467 RFY-----FAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATN 521
F + +EYL S +HRDL N+L+T +K+ DFGL++ N
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------DIN 208
Query: 522 LYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFF 580
+ Y + + K ++APE + + Y D WS GV+++E F +G P+
Sbjct: 209 NIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 581 GETPEELF 588
G EELF
Sbjct: 262 GIPVEELF 269
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E +++ + G +G V++ + + A+K + + S+ + AE ++M
Sbjct: 11 EVPRET-LKLVERLGAGQFGEVWM-GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLM 64
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY--FAETVLA 476
+ +V +Y T++ + ++ EY+E G LK + + + A+
Sbjct: 65 KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 123
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ ++ +HRDL+ N+L++ K+ DFGL+++ + T R+ +F
Sbjct: 124 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKFPI 176
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
K + APE I + D WS G++L E + G +P+ G T E+
Sbjct: 177 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 222
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 24/265 (9%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
D T+ + G YG VY K+ A+K + ++++ ++E+ E +M +
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKH 73
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL--AVEYLH 481
P +V + + ++ E++ G+ L+ + + T + A+EYL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
+HRDL N L+ +K+ DFGLS+ LM+ T +F K
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTX-----TAHAGAKFPIK---- 182
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELFAHTVNDDIEWPS 600
+ APE + + D W+ GV+L+E G P+ G +++ + D
Sbjct: 183 ---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMER 238
Query: 601 EDDWPIQVEAKSIITDLLQQNPRDR 625
+ P +V ++ Q NP DR
Sbjct: 239 PEGCPEKV--YELMRACWQWNPSDR 261
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 97/235 (41%), Gaps = 25/235 (10%)
Query: 356 KFSKTPNENDFTVIKLISNGAYGSVYLVRHKE--TRQRFAMKKIIKNSLMLRNQMEQVFA 413
+F+K + + + ++I G +G V R K ++ K +K R Q + +
Sbjct: 6 EFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER-QRREFLS 64
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK-NTGPLPADMARFYFAE 472
E IM ++P ++ + + ++ E++E G S L+ N G
Sbjct: 65 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG 124
Query: 473 TVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
+ YL VHRDL N+L+ + K++DFGLS+ ++E ++
Sbjct: 125 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSR-------------FLEENSS 171
Query: 533 QFSDKQVYGTP---EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETP 584
+ G + APE I + + D WS G++++E + FGE P
Sbjct: 172 DPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS-----FGERP 221
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E +++ + G +G V++ + + A+K + + S+ + AE ++M
Sbjct: 10 EVPRET-LKLVERLGAGQFGEVWM-GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLM 63
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY--FAETVLA 476
+ +V +Y T++ + ++ EY+E G LK + + + A+
Sbjct: 64 KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 122
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ ++ +HRDL+ N+L++ K+ DFGL+++ + T R+ +F
Sbjct: 123 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKFPI 175
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
K + APE I + D WS G++L E + G +P+ G T E+
Sbjct: 176 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 221
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 8 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 64
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 124
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D +
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEXXK 171
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 172 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E +++ + G +G V++ + + A+K + + S+ + AE ++M
Sbjct: 9 EVPRET-LKLVERLGAGQFGEVWM-GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLM 62
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY--FAETVLA 476
+ +V +Y T++ + ++ EY+E G LK + + + A+
Sbjct: 63 KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ ++ +HRDL+ N+L++ K+ DFGL+++ + T R+ +F
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-------AREGAKFPI 174
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
K + APE I + D WS G++L E + G +P+ G T E+
Sbjct: 175 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 12 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 68
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICK 128
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D +
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEXXK 175
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 12 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 68
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 128
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D +
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEXXK 175
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 14 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 70
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 71 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 130
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D +
Sbjct: 131 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEXXK 177
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 178 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 216
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 48/261 (18%)
Query: 372 ISNGAYGSVYLVRHKETRQR--FAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
+ G YG VY + K+ + +A+K+I + + E ++ +P V+++
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISM-----SACREIALLRELKHPNVISL 83
Query: 430 YCSF--ETKKHLCLVMEYVEGGDCASLLK-------NTGP--LPADMARFYFAETVLAVE 478
F + + L+ +Y E D ++K N P LP M + + + +
Sbjct: 84 QKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142
Query: 479 YLHSYGIVHRDLKPDNLLITA----LGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQF 534
YLH+ ++HRDLKP N+L+ G +K+ D G +++ L K
Sbjct: 143 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL-------------KPL 189
Query: 535 SD-KQVYGTPEYIAPEVIL-RQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEEL----- 587
+D V T Y APE++L + Y K +D W++G I E L P F E++
Sbjct: 190 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPIFHCRQEDIKTSNP 248
Query: 588 FAHTVNDDI----EWPSEDDW 604
+ H D I +P++ DW
Sbjct: 249 YHHDQLDRIFNVMGFPADKDW 269
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 37/224 (16%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
K + G +G V++ + + + A+K + S+ +E AE ++M + +V +
Sbjct: 188 KKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKL 242
Query: 430 YCSFETKKHLCLVMEYVEGGDCASLLKN----TGPLPADMARFYFAETVLAVEYLHSYGI 485
+ TK+ + ++ E++ G LK+ PLP + + A+ + ++
Sbjct: 243 HAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID--FSAQIAEGMAFIEQRNY 299
Query: 486 VHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
+HRDL+ N+L++A K+ DFGL+++G +F K +
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVG-----------------AKFPIK-------W 335
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
APE I + D WS G++L E + G +P+ G + E+
Sbjct: 336 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 13 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 69
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 70 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 129
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D +
Sbjct: 130 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEXXK 176
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 177 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 65
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D +
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEXXK 172
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 7 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 63
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D +
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEXXK 170
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 171 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 209
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 101/248 (40%), Gaps = 41/248 (16%)
Query: 355 DKFSKTPNENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQ 410
D F + ++ + + + GA+G V+L E + K +K++ N +
Sbjct: 4 DTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKD 61
Query: 411 VFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMAR--- 467
E ++++ + +V Y L +V EY++ GD L+ GP MA
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNP 121
Query: 468 ---------FYFAETVLA-VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMS 517
+ A+ + A + YL S VHRDL N L+ +K+ DFG+S
Sbjct: 122 PTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS------ 175
Query: 518 LATNLYECYVERDAKQFSDKQVYGTP----EYIAPEVILRQGYGKPVDWWSMGVILYE-F 572
RD +V G ++ PE I+ + + D WS+GV+L+E F
Sbjct: 176 -----------RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 224
Query: 573 LVGCVPFF 580
G P++
Sbjct: 225 TYGKQPWY 232
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 16 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 72
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 73 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 132
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D +
Sbjct: 133 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEXXK 179
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 180 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 218
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 15 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 71
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 72 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 131
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D +
Sbjct: 132 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEXXK 178
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 179 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 65
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D +
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEXXK 172
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 27/230 (11%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMK-KIIKNSLMLRNQMEQVFAERDIMSFTD 422
D T +K + G +G +V++ + R ++ + K+IK M ++ E +M
Sbjct: 4 KDLTFLKELGTGQFG---VVKYGKWRGQYDVAIKMIKEGSMSEDEF---IEEAKVMMNLS 57
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL-AVEYLH 481
+ +V +Y ++ + ++ EY+ G + L+ + V A+EYL
Sbjct: 58 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 117
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
S +HRDL N L+ G +K++DFGLS+ L E + S V
Sbjct: 118 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD----------EYTSSVGSKFPVRW 167
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
+P PEV++ + D W+ GV+++E + G+ P E F ++
Sbjct: 168 SP----PEVLMYSKFSSKSDIWAFGVLMWE-----IYSLGKMPYERFTNS 208
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 96
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 97 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 156
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D +
Sbjct: 157 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEXXK 203
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 204 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 242
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 27/230 (11%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMK-KIIKNSLMLRNQMEQVFAERDIMSFTD 422
D T +K + G +G +V++ + R ++ + K+IK M ++ E +M
Sbjct: 8 KDLTFLKELGTGQFG---VVKYGKWRGQYDVAIKMIKEGSMSEDEF---IEEAKVMMNLS 61
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL-AVEYLH 481
+ +V +Y ++ + ++ EY+ G + L+ + V A+EYL
Sbjct: 62 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 121
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
S +HRDL N L+ G +K++DFGLS+ YV D S +
Sbjct: 122 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-------------YVLDDEYTSSVGSKFP 168
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
+ PEV++ + D W+ GV+++E + G+ P E F ++
Sbjct: 169 V-RWSPPEVLMYSKFSSKSDIWAFGVLMWE-----IYSLGKMPYERFTNS 212
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 27/230 (11%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMK-KIIKNSLMLRNQMEQVFAERDIMSFTD 422
D T +K + G +G +V++ + R ++ + K+IK M ++ E +M
Sbjct: 24 KDLTFLKELGTGQFG---VVKYGKWRGQYDVAIKMIKEGSMSEDEF---IEEAKVMMNLS 77
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL-AVEYLH 481
+ +V +Y ++ + ++ EY+ G + L+ + V A+EYL
Sbjct: 78 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 137
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
S +HRDL N L+ G +K++DFGLS+ YV D S +
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-------------YVLDDEYTSSVGSKFP 184
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
+ PEV++ + D W+ GV+++E + G+ P E F ++
Sbjct: 185 V-RWSPPEVLMYSKFSSKSDIWAFGVLMWE-----IYSLGKMPYERFTNS 228
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 111/263 (42%), Gaps = 46/263 (17%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDN 423
N F + + I +G++G +YL + +T + A+K ++N ++ + Q+ E I
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK--LEN---VKTKHPQLLYESKIYRILQG 61
Query: 424 PFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADM----ARFYFAETVLA--- 476
+ F VEG ++ GP D+ +R +TVL
Sbjct: 62 GTGIPNVRWFG-----------VEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAD 110
Query: 477 -----VEYLHSYGIVHRDLKPDNLLITALG----HIKLTDFGLSKMGLMSLATNLYECYV 527
VE++HS +HRD+KPDN L+ LG + + DFGL+K +T+ + Y
Sbjct: 111 QMINRVEFVHSKSFLHRDIKPDNFLM-GLGRRANQVYIIDFGLAKK-YRDTSTHQHIPYR 168
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEEL 587
E +K + GT Y + L + D S+G +L FL G +P+ G L
Sbjct: 169 E-------NKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG-----L 216
Query: 588 FAHTVNDDIEWPSEDDWPIQVEA 610
A T E SE +EA
Sbjct: 217 KAGTKKQKYEKISEKKVATSIEA 239
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 368 VIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVV 427
++K + G +G V++ + + + A+K + ++ ++ +E E ++M + +V
Sbjct: 16 LVKKLGAGQFGEVWMGYYNNS-TKVAVKTLKPGTMSVQAFLE----EANLMKTLQHDKLV 70
Query: 428 TMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF--YFAETVLAVEYLHSYGI 485
+Y ++ + ++ E++ G LK+ + + + A+ + Y+
Sbjct: 71 RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 130
Query: 486 VHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEY 545
+HRDL+ N+L++ K+ DFGL+++ + N Y R+ +F K +
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARV----IEDNEYTA---REGAKFPIK-------W 176
Query: 546 IAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGET 583
APE I + + WS G++LYE + G +P+ G T
Sbjct: 177 TAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 27 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 83
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D +
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEXXK 190
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 365 DFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNP 424
+ T++K + +G +G V L + K Q K+IK M ++ F E M +P
Sbjct: 9 EITLLKELGSGQFGVVKLGKWK--GQYDVAVKMIKEGSMSEDEF---FQEAQTMMKLSHP 63
Query: 425 FVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPL--PADMARFYFAETVLAVEYLHS 482
+V Y + + +V EY+ G + L++ G P+ + + + + +L S
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCY-DVCEGMAFLES 122
Query: 483 YGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGT 542
+ +HRDL N L+ +K++DFG+++ L + YV +F K
Sbjct: 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRY-------VLDDQYVSSVGTKFPVK----- 170
Query: 543 PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPF 579
+ APEV Y D W+ G++++E F +G +P+
Sbjct: 171 --WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 32/235 (13%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E+ +KL G +G V++ T R A+K + ++ E E +M
Sbjct: 265 PRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKK 318
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKN-TG-----PLPADMARFYFAETV 474
+ +V +Y +++ + +V EY+ G LK TG P DMA A+
Sbjct: 319 LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA----AQIA 373
Query: 475 LAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQF 534
+ Y+ VHRDL+ N+L+ K+ DFGL+++ + N Y R +F
Sbjct: 374 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----IEDNE---YTARQGAKF 426
Query: 535 SDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
K + APE L + D WS G++L E G VP+ G E+
Sbjct: 427 PIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 474
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 101/245 (41%), Gaps = 38/245 (15%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRF--AMKKIIKNSLMLRNQMEQVFAERDIM-SF 420
ND +I G +G V R K+ R A+K++ ++ E +++
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCKL 79
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMA-------------- 466
+P ++ + + E + +L L +EY G+ L+ + L D A
Sbjct: 80 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 467 --RFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYE 524
+ A+ ++YL +HR+L N+L+ K+ DFGLS+ E
Sbjct: 140 QLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRG---------QE 190
Query: 525 CYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFL-VGCVPFFGET 583
YV++ + + ++A E + Y D WS GV+L+E + +G P+ G T
Sbjct: 191 VYVKKTMGRLPVR-------WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 243
Query: 584 PEELF 588
EL+
Sbjct: 244 CAELY 248
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITA 499
LV E+V D L + L RFY E + A++Y HS GI+HRD+KP N+LI
Sbjct: 110 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDH 166
Query: 500 LGH-IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNV------RVASRY----------FKGPELLVDYQMYD 210
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G +L + PFF
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFF 233
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
E+ E M D+P +V + T+ + ++ME G+ S L+ D+A
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASL 115
Query: 469 --YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECY 526
Y + A+ YL S VHRD+ N+L+++ +KL DFGLS+ Y
Sbjct: 116 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-------------Y 162
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPE 585
+E D+ + + +++APE I + + D W GV ++E L+ G PF G
Sbjct: 163 ME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 221
Query: 586 ELFAHTVNDD 595
++ N +
Sbjct: 222 DVIGRIENGE 231
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 27 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 83
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D +
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEXXK 190
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ N + Y + +
Sbjct: 215 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDYYKKTTNGRLP 268
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+++E F +G P+ G EELF
Sbjct: 269 VK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 315
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
E+ E M D+P +V + T+ + ++ME G+ S L+ D+A
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASL 113
Query: 469 --YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECY 526
Y + A+ YL S VHRD+ N+L+++ +KL DFGLS+ Y
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-------------Y 160
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPE 585
+E D+ + + +++APE I + + D W GV ++E L+ G PF G
Sbjct: 161 ME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
Query: 586 ELFAHTVNDD 595
++ N +
Sbjct: 220 DVIGRIENGE 229
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
E+ E M D+P +V + T+ + ++ME G+ S L+ D+A
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASL 116
Query: 469 --YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECY 526
Y + A+ YL S VHRD+ N+L+++ +KL DFGLS+ Y
Sbjct: 117 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-------------Y 163
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPE 585
+E D+ + + +++APE I + + D W GV ++E L+ G PF G
Sbjct: 164 ME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 222
Query: 586 ELFAHTVNDD 595
++ N +
Sbjct: 223 DVIGRIENGE 232
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
E+ E M D+P +V + T+ + ++ME G+ S L+ D+A
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASL 113
Query: 469 --YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECY 526
Y + A+ YL S VHRD+ N+L+++ +KL DFGLS+ Y
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-------------Y 160
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPE 585
+E D+ + + +++APE I + + D W GV ++E L+ G PF G
Sbjct: 161 ME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
Query: 586 ELFAHTVNDD 595
++ N +
Sbjct: 220 DVIGRIENGE 229
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
E+ E M D+P +V + T+ + ++ME G+ S L+ D+A
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASL 110
Query: 469 --YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECY 526
Y + A+ YL S VHRD+ N+L+++ +KL DFGLS+ Y
Sbjct: 111 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-------------Y 157
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPE 585
+E D+ + + +++APE I + + D W GV ++E L+ G PF G
Sbjct: 158 ME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 216
Query: 586 ELFAHTVNDD 595
++ N +
Sbjct: 217 DVIGRIENGE 226
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
E+ E M D+P +V + T+ + ++ME G+ S L+ D+A
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASL 118
Query: 469 --YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECY 526
Y + A+ YL S VHRD+ N+L+++ +KL DFGLS+ Y
Sbjct: 119 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-------------Y 165
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPE 585
+E D+ + + +++APE I + + D W GV ++E L+ G PF G
Sbjct: 166 ME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 224
Query: 586 ELFAHTVNDD 595
++ N +
Sbjct: 225 DVIGRIENGE 234
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
E+ E M D+P +V + T+ + ++ME G+ S L+ D+A
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQ-VRKYSLDLASL 141
Query: 469 --YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECY 526
Y + A+ YL S VHRD+ N+L+++ +KL DFGLS+ Y
Sbjct: 142 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-------------Y 188
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPE 585
+E D+ + + +++APE I + + D W GV ++E L+ G PF G
Sbjct: 189 ME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 247
Query: 586 ELFAHTVNDD 595
++ N +
Sbjct: 248 DVIGRIENGE 257
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 10 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 66
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+MEY+ G L+ + Y ++
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 126
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HR+L N+L+ +K+ DFGL+K+ + +D + +
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKV-------------LPQDKEYYK 173
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 174 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 27/230 (11%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMK-KIIKNSLMLRNQMEQVFAERDIMSFTD 422
D T +K + G +G +V++ + R ++ + K+IK M ++ E +M
Sbjct: 9 KDLTFLKELGTGQFG---VVKYGKWRGQYDVAIKMIKEGSMSEDEF---IEEAKVMMNLS 62
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL-AVEYLH 481
+ +V +Y ++ + ++ EY+ G + L+ + V A+EYL
Sbjct: 63 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 122
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
S +HRDL N L+ G +K++DFGLS+ YV D S +
Sbjct: 123 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-------------YVLDDEYTSSVGSKFP 169
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
+ PEV++ + D W+ GV+++E + G+ P E F ++
Sbjct: 170 V-RWSPPEVLMYSKFSSKSDIWAFGVLMWE-----IYSLGKMPYERFTNS 213
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 28/248 (11%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHKETRQRFA--MKKIIKNSLMLRNQMEQVFAERDIMSF 420
E FT+ +++ G +GSV + K+ F K++K ++ + +E+ E M
Sbjct: 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKE 81
Query: 421 TDNPFV---VTMYCSFETKKHL---CLVMEYVEGGDCASLL------KNTGPLPADMARF 468
D+P V V + K L +++ +++ GD + L +N LP
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
+ + +EYL S +HRDL N ++ + + DFGLS+ + + Y Y +
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR----KIYSGDY--YRQ 195
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEEL 587
A + K ++A E + Y D W+ GV ++E + G P+ G E+
Sbjct: 196 GCASKLPVK-------WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI 248
Query: 588 FAHTVNDD 595
+ + + +
Sbjct: 249 YNYLIGGN 256
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 32/223 (14%)
Query: 366 FTVIKLISNGAYGSVYL-----VRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
T+++ + G++G VY + E R A+K + S LR ++E E +M
Sbjct: 19 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVK-TVNESASLRERIE-FLNEASVMKG 76
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--------NTGPLPADMARF--YF 470
VV + + +VME + GD S L+ N G P +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 471 AETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYE-CYVER 529
AE + YL++ VHRDL N ++ +K+ DFG+++ ++YE Y +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--------DIYETAYYRK 188
Query: 530 DAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEF 572
K + ++APE + + D WS GV+L+E
Sbjct: 189 GGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 27/230 (11%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMK-KIIKNSLMLRNQMEQVFAERDIMSFTD 422
D T +K + G +G +V++ + R ++ + K+IK M ++ E +M
Sbjct: 15 KDLTFLKELGTGQFG---VVKYGKWRGQYDVAIKMIKEGSMSEDEF---IEEAKVMMNLS 68
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL-AVEYLH 481
+ +V +Y ++ + ++ EY+ G + L+ + V A+EYL
Sbjct: 69 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 128
Query: 482 SYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYG 541
S +HRDL N L+ G +K++DFGLS+ YV D S +
Sbjct: 129 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-------------YVLDDEYTSSVGSKFP 175
Query: 542 TPEYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVPFFGETPEELFAHT 591
+ PEV++ + D W+ GV+++E + G+ P E F ++
Sbjct: 176 V-RWSPPEVLMYSKFSSKSDIWAFGVLMWE-----IYSLGKMPYERFTNS 219
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITA 499
LV E+V D L + L RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 110 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 500 LGH-IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNV------RVASRY----------FKGPELLVDYQMYD 210
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G +L + PFF
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFF 233
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 20/205 (9%)
Query: 375 GAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVF-AERDIMSFTDNPFVVTMYCSF 433
G +G VY + A+KK+ + +++Q F E + + + +V +
Sbjct: 33 GGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFS 90
Query: 434 ETKKHLCLVMEYVEGG---DCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDL 490
LCLV Y G D S L T PL + +LH +HRD+
Sbjct: 91 SDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDI 150
Query: 491 KPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEV 550
K N+L+ K++DFGL++ E+ A+ ++ GT Y APE
Sbjct: 151 KSANILLDEAFTAKISDFGLARAS-------------EKFAQXVXXSRIVGTTAYXAPEA 197
Query: 551 ILRQGYGKPVDWWSMGVILYEFLVG 575
LR D +S GV+L E + G
Sbjct: 198 -LRGEITPKSDIYSFGVVLLEIITG 221
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 32/235 (13%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E+ +KL G +G V++ T R A+K + ++ E E +M
Sbjct: 182 PRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKK 235
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKN-TG-----PLPADMARFYFAETV 474
+ +V +Y + +++ + +V EY+ G LK TG P DMA A+
Sbjct: 236 LRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA----AQIA 290
Query: 475 LAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQF 534
+ Y+ VHRDL+ N+L+ K+ DFGL+++ + N Y R +F
Sbjct: 291 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----IEDNE---YTARQGAKF 343
Query: 535 SDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
K + APE L + D WS G++L E G VP+ G E+
Sbjct: 344 PIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITA 499
LV E+V D L + L RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 109 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 165
Query: 500 LGH-IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 166 EHRKLRLIDWGLAEFYHPGQEYNV------RVASRY----------FKGPELLVDYQMYD 209
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G +L + PFF
Sbjct: 210 YSLDMWSLGCMLASMIFRKEPFF 232
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 19/190 (10%)
Query: 409 EQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF 468
E+ E M D+P +V + T+ + ++ME G+ S L+ D+A
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQ-VRKFSLDLASL 113
Query: 469 --YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECY 526
Y + A+ YL S VHRD+ N+L+++ +KL DFGLS+ Y
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-------------Y 160
Query: 527 VERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPE 585
+E + K +++APE I + + D W GV ++E L+ G PF G
Sbjct: 161 MEDSTXXKASKGKLPI-KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
Query: 586 ELFAHTVNDD 595
++ N +
Sbjct: 220 DVIGRIENGE 229
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITA 499
LV E+V D L + L RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 110 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 500 LGH-IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNV------RVASRY----------FKGPELLVDYQMYD 210
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G +L + PFF
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFF 233
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 363 ENDFTVIKLISNGAYGSVYLVRHK----ETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
E ++ + G +GSV + R+ T + A+KK+ ++ + E +I+
Sbjct: 12 ERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEIL 68
Query: 419 SFT--DNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARF-YFAETVL 475
DN C +++L L+ME++ G L+ + Y ++
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICK 128
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL + +HRDL N+L+ +K+ DFGL+K+ + +D +
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-------------LPQDKEXXK 175
Query: 536 DKQVYGTPEY-IAPEVILRQGYGKPVDWWSMGVILYEFL 573
K+ +P + APE + + D WS GV+LYE
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLIT- 498
LV E+V D L + L RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 110 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 499 ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNV------RVASRY----------FKGPELLVDYQMYD 210
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G +L + PFF
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFF 233
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITA 499
LV E+V D L + L RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 110 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 500 LGH-IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNV------RVASRY----------FKGPELLVDYQMYD 210
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G +L + PFF
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFF 233
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITA 499
LV E+V D L + L RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 110 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 500 LGH-IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNV------RVASRY----------FKGPELLVDYQMYD 210
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G +L + PFF
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFF 233
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITA 499
LV E+V D L + L RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 110 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 500 LGH-IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNV------RVASRY----------FKGPELLVDYQMYD 210
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G +L + PFF
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFF 233
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 32/223 (14%)
Query: 366 FTVIKLISNGAYGSVYL-----VRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
T+++ + G++G VY + E R A+K + S LR ++E E +M
Sbjct: 18 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVK-TVNESASLRERIE-FLNEASVMKG 75
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--------NTGPLPADMARF--YF 470
VV + + +VME + GD S L+ N G P +
Sbjct: 76 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 135
Query: 471 AETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYEC-YVER 529
AE + YL++ VHRDL N ++ +K+ DFG+++ ++YE Y +
Sbjct: 136 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--------DIYETDYYRK 187
Query: 530 DAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEF 572
K + ++APE + + D WS GV+L+E
Sbjct: 188 GGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 103/233 (44%), Gaps = 24/233 (10%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E +++ + G G V++ + + A+K + + S+ + AE ++M
Sbjct: 9 EVPRET-LKLVERLGAGQAGEVWM-GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLM 62
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFY--FAETVLA 476
+ +V +Y T++ + ++ EY+E G LK + + + A+
Sbjct: 63 KQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 477 VEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSD 536
+ ++ +HRDL+ N+L++ K+ DFGL+++ + T R+ +F
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXT-------AREGAKFPI 174
Query: 537 KQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
K + APE I + D WS G++L E + G +P+ G T E+
Sbjct: 175 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 32/223 (14%)
Query: 366 FTVIKLISNGAYGSVYL-----VRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
T+++ + G++G VY + E R A+K + S LR ++E E +M
Sbjct: 19 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVK-TVNESASLRERIE-FLNEASVMKG 76
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--------NTGPLPADMARF--YF 470
VV + + +VME + GD S L+ N G P +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 471 AETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYEC-YVER 529
AE + YL++ VHRDL N ++ +K+ DFG+++ ++YE Y +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--------DIYETDYYRK 188
Query: 530 DAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEF 572
K + ++APE + + D WS GV+L+E
Sbjct: 189 GGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 32/235 (13%)
Query: 361 PNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
P E+ +KL G +G V++ T R A+K + ++ E E +M
Sbjct: 182 PRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKK 235
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKN-TG-----PLPADMARFYFAETV 474
+ +V +Y + +++ + +V EY+ G LK TG P DMA A+
Sbjct: 236 LRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA----AQIA 290
Query: 475 LAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQF 534
+ Y+ VHRDL+ N+L+ K+ DFGL+++ + N Y R +F
Sbjct: 291 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----IEDNE---YTARQGAKF 343
Query: 535 SDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
K + APE L + D WS G++L E G VP+ G E+
Sbjct: 344 PIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITA 499
LV E+V D L + L RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 109 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 165
Query: 500 LGH-IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 166 EHRKLRLIDWGLAEFYHPGQEYNV------RVASRY----------FKGPELLVDYQMYD 209
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G +L + PFF
Sbjct: 210 YSLDMWSLGCMLASMIFRKEPFF 232
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITA 499
LV E+V D L + L RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 110 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 500 LGH-IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNV------RVASRY----------FKGPELLVDYQMYD 210
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G +L + PFF
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFF 233
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITA 499
LV E+V D L + L RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 108 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 164
Query: 500 LGH-IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 165 EHRKLRLIDWGLAEFYHPGQEYNV------RVASRY----------FKGPELLVDYQMYD 208
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G +L + PFF
Sbjct: 209 YSLDMWSLGCMLASMIFRKEPFF 231
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ N + Y + +
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDYYKKTTNGRLP 222
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+++E F +G P+ G EELF
Sbjct: 223 VK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ N + Y + +
Sbjct: 161 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDYYKKTTNGRLP 214
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+++E F +G P+ G EELF
Sbjct: 215 VK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 261
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITA 499
LV E+V D L + L RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 110 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 500 LGH-IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNV------RVASRY----------FKGPELLVDYQMYD 210
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G +L + PFF
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFF 233
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ N + Y + +
Sbjct: 158 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDYYKKTTNGRLP 211
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+++E F +G P+ G EELF
Sbjct: 212 VK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 258
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ N + Y + +
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDYYKKTTNGRLP 222
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+++E F +G P+ G EELF
Sbjct: 223 VK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ N + Y + +
Sbjct: 156 GMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLAR------DINNIDYYKKTTNGRLP 209
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+++E F +G P+ G EELF
Sbjct: 210 VK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 256
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ N + Y + +
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDYYKKTTNGRLP 222
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+++E F +G P+ G EELF
Sbjct: 223 VK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ N + Y + +
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDYYKKTTNGRLP 222
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+++E F +G P+ G EELF
Sbjct: 223 VK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 33/242 (13%)
Query: 354 KDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
KD + + P E+ +KL G +G V++ T R A+K + ++ E
Sbjct: 176 KDAW-EIPRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQ 228
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKN-TG-----PLPADMAR 467
E +M + +V +Y + +++ + +V EY+ G LK TG P DMA
Sbjct: 229 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMA- 286
Query: 468 FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
A+ + Y+ VHRDL+ N+L+ K+ DFGL+++ + N Y
Sbjct: 287 ---AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----IEDNE---YT 336
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEE 586
R +F K + APE L + D WS G++L E G VP+ G E
Sbjct: 337 ARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 389
Query: 587 LF 588
+
Sbjct: 390 VL 391
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 370 KLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFV 426
++I G +G VY L+ + + A+K + N + ++ Q E IM +P V
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 427 VTMY-CSFETKKHLCLVMEYVEGGDCASLLKNT--GPLPADMARFYFAETVLAVEYLHSY 483
+++ ++ +V+ Y++ GD + ++N P D+ F + ++YL S
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASK 151
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
VHRDL N ++ +K+ DFGL++ ++Y +++ +K P
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLAR--------DMY----DKEXXSVHNKTGAKLP 199
Query: 544 -EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
+++A E + Q + D WS GV+L+E + P
Sbjct: 200 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 46/245 (18%)
Query: 362 NENDFTVIKLISNGAYGSVYL-----VRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERD 416
D + + + GA+G V+L + + + A+K + +L R ++ E +
Sbjct: 13 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQR---EAE 69
Query: 417 IMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP---------------- 460
+++ + +V Y L +V EY++ GD L+ GP
Sbjct: 70 LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 461 LPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLAT 520
L ++ + YL S VHRDL N L+ A +K+ DFG+S
Sbjct: 130 LGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS--------- 180
Query: 521 NLYECYVERDAKQFSDKQVYGTP----EYIAPEVILRQGYGKPVDWWSMGVILYE-FLVG 575
RD +V G ++ PE I+ + + D WS GVIL+E F G
Sbjct: 181 --------RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYG 232
Query: 576 CVPFF 580
P+F
Sbjct: 233 KQPWF 237
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 36/248 (14%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ-----MEQVFAERDIM 418
+ T+ K + GA+G V + + + + ML++ + + +E ++M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 419 SFTD-NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP-----------LPADMA 466
+ ++ + + L +++EY G+ L+ P +P +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 467 RFY-----FAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATN 521
F + +EYL S +HRDL N+L+T +K+ DFGL++ N
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------DIN 208
Query: 522 LYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFF 580
+ Y + K ++APE + + Y D WS GV+++E F +G P+
Sbjct: 209 NIDYYKNTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261
Query: 581 GETPEELF 588
G EELF
Sbjct: 262 GIPVEELF 269
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITA 499
LV E+V D L + L RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 115 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 171
Query: 500 LGH-IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 172 EHRKLRLIDWGLAEFYHPGQEYNV------RVASRY----------FKGPELLVDYQMYD 215
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G +L + PFF
Sbjct: 216 YSLDMWSLGCMLASMIFRKEPFF 238
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 440 CLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITA 499
LV E+V D L + L RFY E + A++Y HS GI+HRD+KP N++I
Sbjct: 110 ALVFEHVNNTDFKQLRQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 500 LGH-IKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVIL-RQGYG 557
++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNV------RVASRY----------FKGPELLVDYQMYD 210
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G +L + PFF
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFF 233
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 33/209 (15%)
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPL-----------------PADM 465
+P VV + + L ++ Y GD L P P D
Sbjct: 88 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 147
Query: 466 ARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYEC 525
A+ +EYL S+ +VH+DL N+L+ ++K++D GL + E
Sbjct: 148 VHL-VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR-----------EV 195
Query: 526 YVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETP 584
Y K + + ++APE I+ + D WS GV+L+E F G P+ G +
Sbjct: 196 YAADYYKLLGNSLL--PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 253
Query: 585 EELFAHTVNDDIEWPSEDDWPIQVEAKSI 613
+++ N + P DD P V A I
Sbjct: 254 QDVVEMIRNRQV-LPCPDDCPAWVYALMI 281
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 33/242 (13%)
Query: 354 KDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
KD + + P E+ +KL G +G V++ T R A+K + ++ E
Sbjct: 3 KDAW-EIPRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQ 55
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKN-TG-----PLPADMAR 467
E +M + +V +Y + +++ + +V EY+ G LK TG P DMA
Sbjct: 56 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA- 113
Query: 468 FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
A+ + Y+ VHRDL+ N+L+ K+ DFGL+++ + N Y
Sbjct: 114 ---AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----IEDNE---YT 163
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEE 586
R +F K + APE L + D WS G++L E G VP+ G E
Sbjct: 164 ARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 216
Query: 587 LF 588
+
Sbjct: 217 VL 218
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ + + K+ +
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----------DIHHIDXXKKTT 210
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
+ ++ +++APE + + Y D WS GV+L+E F +G P+ G EELF
Sbjct: 211 NGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 366 FTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPF 425
+ I+ + G + V LV +A+K+I+ + R + ++ E D+ ++P
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQR---EADMHRLFNHPN 87
Query: 426 VVTM--YCSFE--TKKHLCLVMEYVEGGDCAS---LLKNTGP-LPADMARFYFAETVLAV 477
++ + YC E K L++ + + G + LK+ G L D + +
Sbjct: 88 ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGL 147
Query: 478 EYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDK 537
E +H+ G HRDLKP N+L+ G L D G + + + ++ A Q
Sbjct: 148 EAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC-- 205
Query: 538 QVYGTPEYIAPEVILRQGY---GKPVDWWSMGVILYEFLVGCVPF 579
T Y APE+ Q + + D WS+G +LY + G P+
Sbjct: 206 ----TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
Y + +E+L S +HRDL N+L++ +K+ DFGL++ + Y
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLAR-----------DIYKN 252
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEEL 587
D + D ++ +++APE I + Y D WS GV+L+E F +G P+ G +E
Sbjct: 253 PDYVRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDED 310
Query: 588 FAHTVNDDIEWPS-EDDWPIQVEAKSIITDLLQQNPRDR 625
F + + + + E P E I+ D ++P++R
Sbjct: 311 FCSRLREGMRMRAPEYSTP---EIYQIMLDCWHRDPKER 346
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
Y + +E+L S +HRDL N+L++ +K+ DFGL++ + Y +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----------DIYKD 201
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEEL 587
D + D ++ +++APE I + Y D WS GV+L+E F +G P+ G +E
Sbjct: 202 PDXVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
Query: 588 FAHTVND 594
F + +
Sbjct: 260 FCRRLKE 266
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +++ DFGL++ N + Y + +
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLAR------DINNIDYYKKTTNGRLP 222
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+++E F +G P+ G EELF
Sbjct: 223 VK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 33/209 (15%)
Query: 423 NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGPL-----------------PADM 465
+P VV + + L ++ Y GD L P P D
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 466 ARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYEC 525
A+ +EYL S+ +VH+DL N+L+ ++K++D GL + E
Sbjct: 131 VHL-VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR-----------EV 178
Query: 526 YVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETP 584
Y K + + ++APE I+ + D WS GV+L+E F G P+ G +
Sbjct: 179 YAADYYKLLGNSLL--PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 236
Query: 585 EELFAHTVNDDIEWPSEDDWPIQVEAKSI 613
+++ N + P DD P V A I
Sbjct: 237 QDVVEMIRNRQVL-PCPDDCPAWVYALMI 264
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 103/242 (42%), Gaps = 33/242 (13%)
Query: 354 KDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
KD + + P E+ +KL G +G V++ T R A+K + ++ E
Sbjct: 10 KDAW-EIPRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQ 62
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG------PLPADMAR 467
E +M + +V +Y + +++ + +VMEY+ G LK P DMA
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMA- 120
Query: 468 FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
A+ + Y+ VHRDL+ N+L+ K+ DFGL+++ + N Y
Sbjct: 121 ---AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----IEDNE---YT 170
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEE 586
R +F K + APE L + D WS G++L E G VP+ G E
Sbjct: 171 ARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 587 LF 588
+
Sbjct: 224 VL 225
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 431 CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL-AVEYLHSYGIVHRD 489
C + +K L LVMEYV G L A + FA+ + + YLHS +HR+
Sbjct: 85 CEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL--LLFAQQICEGMAYLHSQHYIHRN 142
Query: 490 LKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPE 549
L N+L+ +K+ DFGL+K +E Y R+ D V+ + APE
Sbjct: 143 LAARNVLLDNDRLVKIGDFGLAKA-----VPEGHEYYRVRED---GDSPVF----WYAPE 190
Query: 550 VILRQGYGKPVDWWSMGVILYEFLVGC 576
+ + D WS GV LYE L C
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHC 217
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 441 LVMEYVEGGDCASLLKNTGPLPADM-ARFYFAETVLAVEYLHSYGIVHRDLKPDNLLIT- 498
L+ EYV D L P D R+Y E + A++Y HS GI+HRD+KP N++I
Sbjct: 107 LIFEYVNNTDFKVLY----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 162
Query: 499 ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILR-QGYG 557
L ++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 163 ELRKLRLIDWGLAEFYHPGKEYNV------RVASRY----------FKGPELLVDLQDYD 206
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G + + PFF
Sbjct: 207 YSLDMWSLGCMFAGMIFRKEPFF 229
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 441 LVMEYVEGGDCASLLKNTGPLPADM-ARFYFAETVLAVEYLHSYGIVHRDLKPDNLLIT- 498
L+ EYV D L P D R+Y E + A++Y HS GI+HRD+KP N++I
Sbjct: 105 LIFEYVNNTDFKVLY----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 160
Query: 499 ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILR-QGYG 557
L ++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 161 ELRKLRLIDWGLAEFYHPGKEYNV------RVASRY----------FKGPELLVDLQDYD 204
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G + + PFF
Sbjct: 205 YSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 441 LVMEYVEGGDCASLLKNTGPLPADM-ARFYFAETVLAVEYLHSYGIVHRDLKPDNLLIT- 498
L+ EYV D L P D R+Y E + A++Y HS GI+HRD+KP N++I
Sbjct: 105 LIFEYVNNTDFKVLY----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 160
Query: 499 ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILR-QGYG 557
L ++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 161 ELRKLRLIDWGLAEFYHPGKEYNV------RVASRY----------FKGPELLVDLQDYD 204
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G + + PFF
Sbjct: 205 YSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 441 LVMEYVEGGDCASLLKNTGPLPADM-ARFYFAETVLAVEYLHSYGIVHRDLKPDNLLIT- 498
L+ EYV D L P D R+Y E + A++Y HS GI+HRD+KP N++I
Sbjct: 106 LIFEYVNNTDFKVLY----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 161
Query: 499 ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILR-QGYG 557
L ++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 162 ELRKLRLIDWGLAEFYHPGKEYNV------RVASRY----------FKGPELLVDLQDYD 205
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G + + PFF
Sbjct: 206 YSLDMWSLGCMFAGMIFRKEPFF 228
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 441 LVMEYVEGGDCASLLKNTGPLPADM-ARFYFAETVLAVEYLHSYGIVHRDLKPDNLLIT- 498
L+ EYV D L P D R+Y E + A++Y HS GI+HRD+KP N++I
Sbjct: 106 LIFEYVNNTDFKVLY----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 161
Query: 499 ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILR-QGYG 557
L ++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 162 ELRKLRLIDWGLAEFYHPGKEYNV------RVASRY----------FKGPELLVDLQDYD 205
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G + + PFF
Sbjct: 206 YSLDMWSLGCMFAGMIFRKEPFF 228
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 441 LVMEYVEGGDCASLLKNTGPLPADM-ARFYFAETVLAVEYLHSYGIVHRDLKPDNLLIT- 498
L+ EYV D L P D R+Y E + A++Y HS GI+HRD+KP N++I
Sbjct: 105 LIFEYVNNTDFKVLY----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 160
Query: 499 ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILR-QGYG 557
L ++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 161 ELRKLRLIDWGLAEFYHPGKEYNV------RVASRY----------FKGPELLVDLQDYD 204
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G + + PFF
Sbjct: 205 YSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ + + Y + +
Sbjct: 147 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDYYKKTTNGRLP 200
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+L+E F +G P+ G EELF
Sbjct: 201 VK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 247
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 441 LVMEYVEGGDCASLLKNTGPLPADM-ARFYFAETVLAVEYLHSYGIVHRDLKPDNLLIT- 498
L+ EYV D L P D R+Y E + A++Y HS GI+HRD+KP N++I
Sbjct: 105 LIFEYVNNTDFKVLY----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 160
Query: 499 ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILR-QGYG 557
L ++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 161 ELRKLRLIDWGLAEFYHPGKEYNV------RVASRY----------FKGPELLVDLQDYD 204
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G + + PFF
Sbjct: 205 YSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ + + Y + +
Sbjct: 155 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDYYKKTTNGRLP 208
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+L+E F +G P+ G EELF
Sbjct: 209 VK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 255
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 441 LVMEYVEGGDCASLLKNTGPLPADM-ARFYFAETVLAVEYLHSYGIVHRDLKPDNLLIT- 498
L+ EYV D L P D R+Y E + A++Y HS GI+HRD+KP N++I
Sbjct: 105 LIFEYVNNTDFKVLY----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 160
Query: 499 ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILR-QGYG 557
L ++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 161 ELRKLRLIDWGLAEFYHPGKEYNV------RVASRY----------FKGPELLVDLQDYD 204
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G + + PFF
Sbjct: 205 YSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ + + Y + +
Sbjct: 151 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDYYKKTTNGRLP 204
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+L+E F +G P+ G EELF
Sbjct: 205 VK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 251
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
Y + +E+L S +HRDL N+L++ +K+ DFGL++ + Y +
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----------DIYKD 251
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEEL 587
D + D ++ +++APE I + Y D WS GV+L+E F +G P+ G +E
Sbjct: 252 PDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 309
Query: 588 FAHTVND 594
F + +
Sbjct: 310 FCRRLKE 316
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 33/258 (12%)
Query: 338 LTDTSIESNSDSYCSKKDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKI 397
LT+ S + KD + + P E+ +KL G +G V++ T R A+K +
Sbjct: 161 LTNVCPTSKPQTQGLAKDAW-EIPRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTL 217
Query: 398 IKNSLMLRNQMEQVFAERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKN 457
++ E E +M + +V +Y + +++ + +V EY+ G LK
Sbjct: 218 KPGNM----SPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKG 272
Query: 458 TG------PLPADMARFYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLS 511
P DMA A+ + Y+ VHRDL+ N+L+ K+ DFGL
Sbjct: 273 EMGKYLRLPQLVDMA----AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLG 328
Query: 512 KMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE 571
++ + N Y R +F K + APE L + D WS G++L E
Sbjct: 329 RL----IEDNE---YTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLTE 374
Query: 572 FLV-GCVPFFGETPEELF 588
G VP+ G E+
Sbjct: 375 LTTKGRVPYPGMVNREVL 392
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
Y + +E+L S +HRDL N+L++ +K+ DFGL++ + Y +
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----------DIYKD 253
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEEL 587
D + D ++ +++APE I + Y D WS GV+L+E F +G P+ G +E
Sbjct: 254 PDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 311
Query: 588 FAHTVND 594
F + +
Sbjct: 312 FCRRLKE 318
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ + + Y + +
Sbjct: 154 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDYYKKTTNGRLP 207
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+L+E F +G P+ G EELF
Sbjct: 208 VK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 254
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ + + Y + +
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDYYKKTTNGRLP 215
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+L+E F +G P+ G EELF
Sbjct: 216 VK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 441 LVMEYVEGGDCASLLKNTGPLPADM-ARFYFAETVLAVEYLHSYGIVHRDLKPDNLLIT- 498
L+ EYV D L P D R+Y E + A++Y HS GI+HRD+KP N++I
Sbjct: 105 LIFEYVNNTDFKVLY----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 160
Query: 499 ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILR-QGYG 557
L ++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 161 ELRKLRLIDWGLAEFYHPGKEYNV------RVASRY----------FKGPELLVDLQDYD 204
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G + + PFF
Sbjct: 205 YSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
Y + +E+L S +HRDL N+L++ +K+ DFGL++ + Y +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----------DIYKD 192
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEEL 587
D + D ++ +++APE I + Y D WS GV+L+E F +G P+ G +E
Sbjct: 193 PDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 250
Query: 588 FAHTVND 594
F + +
Sbjct: 251 FCRRLKE 257
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
Y + +E+L S +HRDL N+L++ +K+ DFGL++ + Y +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----------DIYKD 201
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEEL 587
D + D ++ +++APE I + Y D WS GV+L+E F +G P+ G +E
Sbjct: 202 PDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
Query: 588 FAHTVND 594
F + +
Sbjct: 260 FCRRLKE 266
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ + + Y + +
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDYYKKTTNGRLP 215
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+L+E F +G P+ G EELF
Sbjct: 216 VK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
Y + +E+L S +HRDL N+L++ +K+ DFGL++ + Y +
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----------DIYKD 203
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEEL 587
D + D ++ +++APE I + Y D WS GV+L+E F +G P+ G +E
Sbjct: 204 PDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 261
Query: 588 FAHTVND 594
F + +
Sbjct: 262 FCRRLKE 268
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
Y + +E+L S +HRDL N+L++ +K+ DFGL++ + Y +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----------DIYKD 192
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEEL 587
D + D ++ +++APE I + Y D WS GV+L+E F +G P+ G +E
Sbjct: 193 PDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 250
Query: 588 FAHTVND 594
F + +
Sbjct: 251 FCRRLKE 257
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 370 KLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFV 426
++I G +G VY L+ + + A+K + N + ++ Q E IM +P V
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 427 VTMY-CSFETKKHLCLVMEYVEGGDCASLLKNT--GPLPADMARFYFAETVLAVEYLHSY 483
+++ ++ +V+ Y++ GD + ++N P D+ F + ++YL S
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASK 170
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
VHRDL N ++ +K+ DFGL++ ++Y +++ +K P
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLAR--------DMY----DKEYYSVHNKTGAKLP 218
Query: 544 -EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
+++A E + Q + D WS GV+L+E + P
Sbjct: 219 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 441 LVMEYVEGGDCASLLKNTGPLPADM-ARFYFAETVLAVEYLHSYGIVHRDLKPDNLLIT- 498
L+ EYV D L P D R+Y E + A++Y HS GI+HRD+KP N++I
Sbjct: 126 LIFEYVNNTDFKVLY----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 181
Query: 499 ALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPEVILR-QGYG 557
L ++L D+GL++ N+ R A ++ + PE+++ Q Y
Sbjct: 182 ELRKLRLIDWGLAEFYHPGKEYNV------RVASRY----------FKGPELLVDLQDYD 225
Query: 558 KPVDWWSMGVILYEFLVGCVPFF 580
+D WS+G + + PFF
Sbjct: 226 YSLDMWSLGCMFAGMIFRKEPFF 248
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
Y + +E+L S +HRDL N+L++ +K+ DFGL++ + Y +
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----------DIYKD 244
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEEL 587
D + D ++ +++APE I + Y D WS GV+L+E F +G P+ G +E
Sbjct: 245 PDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 302
Query: 588 FAHTVND 594
F + +
Sbjct: 303 FCRRLKE 309
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 33/242 (13%)
Query: 354 KDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
KD + + P E+ +KL G +G V++ T R A+K + ++ E
Sbjct: 10 KDAW-EIPRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQ 62
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG------PLPADMAR 467
E +M + +V +Y + +++ + +V+EY+ G LK P DMA
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMA- 120
Query: 468 FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
A+ + Y+ VHRDL+ N+L+ K+ DFGL+++ + N Y
Sbjct: 121 ---AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----IEDNE---YT 170
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEE 586
R +F K + APE L + D WS G++L E G VP+ G E
Sbjct: 171 ARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 587 LF 588
+
Sbjct: 224 VL 225
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ + + Y + +
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDYYKKTTNGRLP 215
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+L+E F +G P+ G EELF
Sbjct: 216 VK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
Y + +E+L S +HRDL N+L++ +K+ DFGL++ + Y +
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----------DIYKD 246
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEEL 587
D + D ++ +++APE I + Y D WS GV+L+E F +G P+ G +E
Sbjct: 247 PDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 304
Query: 588 FAHTVND 594
F + +
Sbjct: 305 FCRRLKE 311
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 370 KLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFV 426
++I G +G VY L+ + + A+K + N + ++ Q E IM +P V
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 427 VTMY-CSFETKKHLCLVMEYVEGGDCASLLKNT--GPLPADMARFYFAETVLAVEYLHSY 483
+++ ++ +V+ Y++ GD + ++N P D+ F + ++YL S
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASK 152
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
VHRDL N ++ +K+ DFGL++ ++Y +++ +K P
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLAR--------DMY----DKEYYSVHNKTGAKLP 200
Query: 544 -EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
+++A E + Q + D WS GV+L+E + P
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 37/230 (16%)
Query: 372 ISNGAYGSVYLVRH-----KETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFV 426
+ GA+G V+L ++ + A+K + + S R ++ E ++++ + +
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHI 105
Query: 427 VTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP-------------LPADMARFYFAET 473
V + + L +V EY+ GD L++ GP P + + +
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 474 VLAVE--YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+A YL VHRDL N L+ +K+ DFG+S+ ++Y D
Sbjct: 166 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--------DIYST----DY 213
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFF 580
+ + + ++ PE IL + + D WS GV+L+E F G P++
Sbjct: 214 YRVGGRTMLPI-RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 32/223 (14%)
Query: 366 FTVIKLISNGAYGSVYL-----VRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
T+++ + G++G VY + E R A+K + S LR ++E E +M
Sbjct: 19 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVK-TVNESASLRERIE-FLNEASVMKG 76
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--------NTGPLPADMARF--YF 470
VV + + +VME + GD S L+ N G P +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 471 AETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYEC-YVER 529
AE + YL++ VHR+L N ++ +K+ DFG+++ ++YE Y +
Sbjct: 137 AEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--------DIYETDYYRK 188
Query: 530 DAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEF 572
K + ++APE + + D WS GV+L+E
Sbjct: 189 GGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 476 AVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFS 535
+EYL S +HRDL N+L+T +K+ DFGL++ + + Y + +
Sbjct: 203 GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR------DIHHIDYYKKTTNGRLP 256
Query: 536 DKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEELF 588
K ++APE + + Y D WS GV+L+E F +G P+ G EELF
Sbjct: 257 VK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
Y + +E+L S +HRDL N+L++ +K+ DFGL++ + Y +
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-----------DIYKD 238
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEEL 587
D + D ++ +++APE I + Y D WS GV+L+E F +G P+ G +E
Sbjct: 239 PDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 296
Query: 588 FAHTVND 594
F + +
Sbjct: 297 FCRRLKE 303
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 370 KLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFV 426
++I G +G VY L+ + + A+K + N + ++ Q E IM +P V
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 427 VTMY-CSFETKKHLCLVMEYVEGGDCASLLKNT--GPLPADMARFYFAETVLAVEYLHSY 483
+++ ++ +V+ Y++ GD + ++N P D+ F + ++YL S
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASK 147
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
VHRDL N ++ +K+ DFGL++ ++Y +++ +K P
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLAR--------DMY----DKEYYSVHNKTGAKLP 195
Query: 544 -EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
+++A E + Q + D WS GV+L+E + P
Sbjct: 196 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 30/222 (13%)
Query: 366 FTVIKLISNGAYGSVYL-----VRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
T+++ + G++G VY + E R A+K + S LR ++E E +M
Sbjct: 16 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVK-TVNESASLRERIE-FLNEASVMKG 73
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--------NTGPLPADMARF--YF 470
VV + + +VME + GD S L+ N G P +
Sbjct: 74 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 133
Query: 471 AETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
AE + YL++ VHRDL N ++ +K+ DFG+++ E D
Sbjct: 134 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR------------DIXETD 181
Query: 531 AKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEF 572
+ K + ++APE + + D WS GV+L+E
Sbjct: 182 XXRKGGKGLLPV-RWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 370 KLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFV 426
++I G +G VY L+ + + A+K + N + ++ Q E IM +P V
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 427 VTMY-CSFETKKHLCLVMEYVEGGDCASLLKNT--GPLPADMARFYFAETVLAVEYLHSY 483
+++ ++ +V+ Y++ GD + ++N P D+ F + ++YL S
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASK 150
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
VHRDL N ++ +K+ DFGL++ ++Y +++ +K P
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLAR--------DMY----DKEYYSVHNKTGAKLP 198
Query: 544 -EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
+++A E + Q + D WS GV+L+E + P
Sbjct: 199 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 370 KLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFV 426
++I G +G VY L+ + + A+K + N + ++ Q E IM +P V
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 427 VTMY-CSFETKKHLCLVMEYVEGGDCASLLKNT--GPLPADMARFYFAETVLAVEYLHSY 483
+++ ++ +V+ Y++ GD + ++N P D+ F + ++YL S
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASK 151
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
VHRDL N ++ +K+ DFGL++ ++Y +++ +K P
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLAR--------DMY----DKEYYSVHNKTGAKLP 199
Query: 544 -EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
+++A E + Q + D WS GV+L+E + P
Sbjct: 200 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
Y + +E+L S +HRDL N+L++ +K+ DFGL++ + Y +
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR-----------DIYKD 197
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEEL 587
D + D ++ +++APE I + Y D WS GV+L+E F +G P+ G +E
Sbjct: 198 PDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 255
Query: 588 FAHTVND 594
F + +
Sbjct: 256 FXRRLKE 262
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 370 KLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFV 426
++I G +G VY L+ + + A+K + N + ++ Q E IM +P V
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 427 VTMY-CSFETKKHLCLVMEYVEGGDCASLLKNT--GPLPADMARFYFAETVLAVEYLHSY 483
+++ ++ +V+ Y++ GD + ++N P D+ F + ++YL S
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASK 171
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
VHRDL N ++ +K+ DFGL++ ++Y +++ +K P
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLAR--------DMY----DKEYYSVHNKTGAKLP 219
Query: 544 -EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
+++A E + Q + D WS GV+L+E + P
Sbjct: 220 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 30/222 (13%)
Query: 366 FTVIKLISNGAYGSVYL-----VRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
T+++ + G++G VY + E R A+K + S LR ++E E +M
Sbjct: 19 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVK-TVNESASLRERIE-FLNEASVMKG 76
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--------NTGPLPADMARF--YF 470
VV + + +VME + GD S L+ N G P +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 471 AETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
AE + YL++ VHRDL N ++ +K+ DFG+++ E D
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR------------DIXETD 184
Query: 531 AKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEF 572
+ K + ++APE + + D WS GV+L+E
Sbjct: 185 XXRKGGKGLLPV-RWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 469 YFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVE 528
Y + +E+L S +HRDL N+L++ +K+ DFGL++ + Y +
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR-----------DIYKD 197
Query: 529 RDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFFGETPEEL 587
D + D ++ +++APE I + Y D WS GV+L+E F +G P+ G +E
Sbjct: 198 PDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 255
Query: 588 FAHTVND 594
F + +
Sbjct: 256 FCRRLKE 262
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 32/223 (14%)
Query: 366 FTVIKLISNGAYGSVYL-----VRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
T+++ + G++G VY + E R A+K + S LR ++E E +M
Sbjct: 20 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVK-TVNESASLRERIE-FLNEASVMKG 77
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--------NTGPLPADMARF--YF 470
VV + + +VME + GD S L+ N G P +
Sbjct: 78 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 137
Query: 471 AETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYEC-YVER 529
AE + YL++ VHR+L N ++ +K+ DFG+++ ++YE Y +
Sbjct: 138 AEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--------DIYETDYYRK 189
Query: 530 DAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEF 572
K + ++APE + + D WS GV+L+E
Sbjct: 190 GGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 30/222 (13%)
Query: 366 FTVIKLISNGAYGSVYL-----VRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSF 420
T+++ + G++G VY + E R A+K + S LR ++E E +M
Sbjct: 19 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVK-TVNESASLRERIE-FLNEASVMKG 76
Query: 421 TDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLK--------NTGPLPADMARF--YF 470
VV + + +VME + GD S L+ N G P +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 471 AETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERD 530
AE + YL++ VHRDL N ++ +K+ DFG+++ E D
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR------------DIXETD 184
Query: 531 AKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEF 572
+ K + ++APE + + D WS GV+L+E
Sbjct: 185 XXRKGGKGLLPV-RWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 370 KLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFV 426
++I G +G VY L+ + + A+K + N + ++ Q E IM +P V
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 427 VTMY-CSFETKKHLCLVMEYVEGGDCASLLKNT--GPLPADMARFYFAETVLAVEYLHSY 483
+++ ++ +V+ Y++ GD + ++N P D+ F + ++YL S
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASK 152
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
VHRDL N ++ +K+ DFGL++ ++Y +++ +K P
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLAR--------DMY----DKEYYSVHNKTGAKLP 200
Query: 544 -EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
+++A E + Q + D WS GV+L+E + P
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 37/230 (16%)
Query: 372 ISNGAYGSVYLVRH-----KETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFV 426
+ GA+G V+L ++ + A+K + + S R ++ E ++++ + +
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHI 76
Query: 427 VTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP-------------LPADMARFYFAET 473
V + + L +V EY+ GD L++ GP P + + +
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 474 VLAVE--YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+A YL VHRDL N L+ +K+ DFG+S+ ++Y D
Sbjct: 137 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--------DIYST----DY 184
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFF 580
+ + + ++ PE IL + + D WS GV+L+E F G P++
Sbjct: 185 YRVGGRTMLPI-RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 233
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 33/242 (13%)
Query: 354 KDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
KD + + P E+ +KL G +G V++ T R A+K + ++ E
Sbjct: 7 KDAW-EIPRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQ 59
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKN-TG-----PLPADMAR 467
E +M + +V +Y + +++ + +V EY+ G LK TG P DM+
Sbjct: 60 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS- 117
Query: 468 FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
A+ + Y+ VHRDL+ N+L+ K+ DFGL+++ + N Y
Sbjct: 118 ---AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----IEDNE---YT 167
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEE 586
R +F K + APE L + D WS G++L E G VP+ G E
Sbjct: 168 ARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 220
Query: 587 LF 588
+
Sbjct: 221 VL 222
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 370 KLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFV 426
++I G +G VY L+ + + A+K + N + ++ Q E IM +P V
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 427 VTMY-CSFETKKHLCLVMEYVEGGDCASLLKNT--GPLPADMARFYFAETVLAVEYLHSY 483
+++ ++ +V+ Y++ GD + ++N P D+ F + ++YL S
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASK 149
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
VHRDL N ++ +K+ DFGL++ ++Y +++ +K P
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLAR--------DMY----DKEYYSVHNKTGAKLP 197
Query: 544 -EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
+++A E + Q + D WS GV+L+E + P
Sbjct: 198 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 37/230 (16%)
Query: 372 ISNGAYGSVYLVRH-----KETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFV 426
+ GA+G V+L ++ + A+K + + S R ++ E ++++ + +
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHI 82
Query: 427 VTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP-------------LPADMARFYFAET 473
V + + L +V EY+ GD L++ GP P + + +
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 474 VLAVE--YLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDA 531
+A YL VHRDL N L+ +K+ DFG+S+ ++Y D
Sbjct: 143 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR--------DIYST----DY 190
Query: 532 KQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGCVPFF 580
+ + + ++ PE IL + + D WS GV+L+E F G P++
Sbjct: 191 YRVGGRTMLPI-RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 239
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 370 KLISNGAYGSVY---LVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFV 426
++I G +G VY L+ + + A+K + N + ++ Q E IM +P V
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 427 VTMY-CSFETKKHLCLVMEYVEGGDCASLLKNT--GPLPADMARFYFAETVLAVEYLHSY 483
+++ ++ +V+ Y++ GD + ++N P D+ F + ++YL S
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASK 144
Query: 484 GIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTP 543
VHRDL N ++ +K+ DFGL++ ++Y +++ +K P
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLAR--------DMY----DKEYYSVHNKTGAKLP 192
Query: 544 -EYIAPEVILRQGYGKPVDWWSMGVILYEFLVGCVP 578
+++A E + Q + D WS GV+L+E + P
Sbjct: 193 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 431 CSFETKKHLCLVMEYVEGGDCASLLKNTGPLPADMARFYFAETVL-AVEYLHSYGIVHRD 489
C + +K L LVMEYV G L A + FA+ + + YLH+ +HR+
Sbjct: 85 CEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL--LLFAQQICEGMAYLHAQHYIHRN 142
Query: 490 LKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAKQFSDKQVYGTPEYIAPE 549
L N+L+ +K+ DFGL+K +E Y R+ D V+ + APE
Sbjct: 143 LAARNVLLDNDRLVKIGDFGLAKA-----VPEGHEYYRVRED---GDSPVF----WYAPE 190
Query: 550 VILRQGYGKPVDWWSMGVILYEFLVGC 576
+ + D WS GV LYE L C
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHC 217
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 44/252 (17%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ-----MEQVFAERDIM 418
+ T+ K + GA+G V + + + + ML++ + + +E ++M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 419 SFTD-NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP-----------LPADMA 466
+ ++ + + L +++EY G+ L+ P +P +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 467 RFY-----FAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATN 521
F + +EYL S +HRDL N+L+T +K+ DFGL+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---------- 204
Query: 522 LYECYVERDAKQFS--DKQVYGT--PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGC 576
RD K G +++APE + + Y D WS GV+++E F +G
Sbjct: 205 -------RDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
Query: 577 VPFFGETPEELF 588
P+ G EELF
Sbjct: 258 SPYPGIPVEELF 269
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 33/242 (13%)
Query: 354 KDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
KD + + P E+ +KL G +G V++ T R A+K + ++ E
Sbjct: 10 KDAW-EIPRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQ 62
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG------PLPADMAR 467
E +M + +V +Y + +++ + +V EY+ G LK P DMA
Sbjct: 63 EAQVMKKIRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA- 120
Query: 468 FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
A+ + Y+ VHRDL+ N+L+ K+ DFGL+++ + N Y
Sbjct: 121 ---AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----IEDNE---YT 170
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEE 586
R +F K + APE L + D WS G++L E G VP+ G E
Sbjct: 171 ARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 587 LF 588
+
Sbjct: 224 VL 225
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 32/237 (13%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E+ +KL G +G V++ T R A+K + ++ E E +M
Sbjct: 4 EIPRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVM 57
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKN-TG-----PLPADMARFYFAE 472
+ +V +Y + +++ + +V EY+ G LK TG P DMA A+
Sbjct: 58 KKLRHEKLVQLY-AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA----AQ 112
Query: 473 TVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
+ Y+ VHRDL+ N+L+ K+ DFGL+++ + N E A+
Sbjct: 113 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----IEDN------EXTAR 162
Query: 533 QFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
Q + + ++ APE L + D WS G++L E G VP+ G E+
Sbjct: 163 QGAKFPI----KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 33/242 (13%)
Query: 354 KDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
KD + + P E+ +KL G +G V++ T R A+K + ++ E
Sbjct: 1 KDAW-EIPRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQ 53
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG------PLPADMAR 467
E +M + +V +Y + +++ + +V EY+ G LK P DMA
Sbjct: 54 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA- 111
Query: 468 FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
A+ + Y+ VHRDL+ N+L+ K+ DFGL+++ + N Y
Sbjct: 112 ---AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----IEDNE---YT 161
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEE 586
R +F K + APE L + D WS G++L E G VP+ G E
Sbjct: 162 ARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 214
Query: 587 LF 588
+
Sbjct: 215 VL 216
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 101/252 (40%), Gaps = 44/252 (17%)
Query: 364 NDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQ-----MEQVFAERDIM 418
+ T+ K + GA+G V + + + + ML++ + + +E ++M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 419 SFTD-NPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTGP-----------LPADMA 466
+ ++ + + L +++EY G+ L+ P +P +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 467 RFY-----FAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATN 521
F + +EYL S +HRDL N+L+T +K+ DFGL+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---------- 204
Query: 522 LYECYVERDAKQFS--DKQVYGT--PEYIAPEVILRQGYGKPVDWWSMGVILYE-FLVGC 576
RD K G +++APE + + Y D WS GV+++E F +G
Sbjct: 205 -------RDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
Query: 577 VPFFGETPEELF 588
P+ G EELF
Sbjct: 258 SPYPGIPVEELF 269
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 33/242 (13%)
Query: 354 KDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
KD + + P E+ +KL G +G V++ T R A+K + ++ E
Sbjct: 10 KDAW-EIPRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQ 62
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG------PLPADMAR 467
E +M + +V +Y + +++ + +V EY+ G LK P DMA
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA- 120
Query: 468 FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
A+ + Y+ VHRDL+ N+L+ K+ DFGL+++ + N Y
Sbjct: 121 ---AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----IEDNE---YT 170
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEE 586
R +F K + APE L + D WS G++L E G VP+ G E
Sbjct: 171 ARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 587 LF 588
+
Sbjct: 224 VL 225
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 32/237 (13%)
Query: 359 KTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIM 418
+ P E+ +KL G +G V++ T R A+K + ++ E E +M
Sbjct: 3 EIPRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVM 56
Query: 419 SFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG------PLPADMARFYFAE 472
+ +V +Y + +++ + +V EY+ G LK P DMA A+
Sbjct: 57 KKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA----AQ 111
Query: 473 TVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYVERDAK 532
+ Y+ VHRDL+ N+L+ K+ DFGL+++ + N Y R
Sbjct: 112 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----IEDNE---YTARQGA 164
Query: 533 QFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEELF 588
+F K + APE L + D WS G++L E G VP+ G E+
Sbjct: 165 KFPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 214
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 128/329 (38%), Gaps = 72/329 (21%)
Query: 370 KLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFAERDIMSFTDNPFVVTM 429
K++ G+ G+V + R A+K+++ + + ++ E D D+P V+
Sbjct: 21 KILGYGSSGTVVFQGSFQGRP-VAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRY 74
Query: 430 YCSFETKKHLCLVMEY--------VEGGDCA----SLLKNTGPLPADMARFYFAETVLAV 477
YCS T + L + +E VE + + L K P+ + V
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISL------LRQIASGV 128
Query: 478 EYLHSYGIVHRDLKPDNLLITALG-------------HIKLTDFGLSKM---GLMSLATN 521
+LHS I+HRDLKP N+L++ I ++DFGL K G S TN
Sbjct: 129 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN 188
Query: 522 LYECYVERDAKQFSDKQVYGTPEYIAPEVI-------LRQGYGKPVDWWSMGVILYEFLV 574
L GT + APE++ ++ + +D +SMG + Y L
Sbjct: 189 L--------------NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 575 GCVPFFGE--TPEELFAHTVNDDIEWPSEDDWPIQVEAKSIITDLLQQNPRDRLGTGGPH 632
FG+ + E + E D + EA +I+ ++ +P R
Sbjct: 235 KGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKR---PTAM 291
Query: 633 EVKEHPYFSNLDWNSLLRHKAEFIPQLDD 661
+V HP F W K EF+ ++ D
Sbjct: 292 KVLRHPLF----WPK--SKKLEFLLKVSD 314
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 33/242 (13%)
Query: 354 KDKFSKTPNENDFTVIKLISNGAYGSVYLVRHKETRQRFAMKKIIKNSLMLRNQMEQVFA 413
KD + + P E+ +KL G +G V++ T R A+K + ++ E
Sbjct: 10 KDAW-EIPRESLRLEVKL-GQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQ 62
Query: 414 ERDIMSFTDNPFVVTMYCSFETKKHLCLVMEYVEGGDCASLLKNTG------PLPADMAR 467
E +M + +V +Y + +++ + +V EY+ G LK P DMA
Sbjct: 63 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMA- 120
Query: 468 FYFAETVLAVEYLHSYGIVHRDLKPDNLLITALGHIKLTDFGLSKMGLMSLATNLYECYV 527
A+ + Y+ VHRDL+ N+L+ K+ DFGL+++ + N Y
Sbjct: 121 ---AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----IEDNE---YT 170
Query: 528 ERDAKQFSDKQVYGTPEYIAPEVILRQGYGKPVDWWSMGVILYEFLV-GCVPFFGETPEE 586
R +F K + APE L + D WS G++L E G VP+ G E
Sbjct: 171 ARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 223
Query: 587 LF 588
+
Sbjct: 224 VL 225
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,734,154
Number of Sequences: 62578
Number of extensions: 856326
Number of successful extensions: 4709
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 1720
Number of HSP's gapped (non-prelim): 1151
length of query: 810
length of database: 14,973,337
effective HSP length: 107
effective length of query: 703
effective length of database: 8,277,491
effective search space: 5819076173
effective search space used: 5819076173
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)