Query psy16848
Match_columns 514
No_of_seqs 200 out of 2687
Neff 9.2
Searched_HMMs 46136
Date Fri Aug 16 23:36:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16848.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16848hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0156 BioF 7-keto-8-aminopel 100.0 7.4E-49 1.6E-53 388.9 36.0 345 16-477 37-387 (388)
2 KOG1360|consensus 100.0 1E-47 2.2E-52 362.9 31.8 368 18-497 171-542 (570)
3 PLN02955 8-amino-7-oxononanoat 100.0 5.9E-43 1.3E-47 354.4 35.9 345 17-483 101-464 (476)
4 TIGR01821 5aminolev_synth 5-am 100.0 5E-41 1.1E-45 345.7 37.7 353 17-483 44-399 (402)
5 PRK13393 5-aminolevulinate syn 100.0 2E-40 4.3E-45 341.5 38.5 353 17-483 44-399 (406)
6 PRK09064 5-aminolevulinate syn 100.0 4.2E-40 9.2E-45 339.5 38.6 353 17-483 45-400 (407)
7 KOG1359|consensus 100.0 8.9E-41 1.9E-45 304.5 26.8 344 18-482 67-414 (417)
8 PRK13392 5-aminolevulinate syn 100.0 6.4E-40 1.4E-44 338.3 36.1 353 17-483 45-400 (410)
9 PLN02822 serine palmitoyltrans 100.0 3.3E-39 7.1E-44 336.3 37.6 356 15-481 106-478 (481)
10 PRK07179 hypothetical protein; 100.0 1.6E-38 3.5E-43 327.5 38.4 351 14-485 50-403 (407)
11 PLN02483 serine palmitoyltrans 100.0 1.9E-38 4.2E-43 331.2 38.0 364 16-487 98-473 (489)
12 PLN03227 serine palmitoyltrans 100.0 5.7E-38 1.2E-42 320.1 35.4 352 21-481 1-383 (392)
13 TIGR01822 2am3keto_CoA 2-amino 100.0 1.8E-37 3.9E-42 318.8 37.9 352 16-482 36-391 (393)
14 TIGR01825 gly_Cac_T_rel pyrido 100.0 4.1E-35 9E-40 300.5 37.6 353 13-482 28-383 (385)
15 TIGR00858 bioF 8-amino-7-oxono 100.0 7.4E-35 1.6E-39 295.8 36.4 346 13-475 11-360 (360)
16 PRK06939 2-amino-3-ketobutyrat 100.0 1.4E-34 3E-39 297.9 37.0 352 16-482 40-395 (397)
17 cd06454 KBL_like KBL_like; thi 100.0 1.1E-34 2.3E-39 293.5 35.2 343 19-477 2-348 (349)
18 PRK05958 8-amino-7-oxononanoat 100.0 2.5E-34 5.4E-39 294.7 36.7 347 13-477 34-384 (385)
19 PRK05937 8-amino-7-oxononanoat 100.0 8.6E-34 1.9E-38 288.4 37.4 342 18-485 4-355 (370)
20 COG4992 ArgD Ornithine/acetylo 100.0 4.6E-34 9.9E-39 277.5 28.1 326 31-481 60-399 (404)
21 COG0436 Aspartate/tyrosine/aro 100.0 3E-32 6.6E-37 276.4 33.9 345 18-481 28-392 (393)
22 PRK07505 hypothetical protein; 100.0 4.2E-31 9.2E-36 271.8 35.7 344 15-480 43-399 (402)
23 TIGR03246 arg_catab_astC succi 100.0 6.1E-30 1.3E-34 262.2 32.2 337 16-481 33-396 (397)
24 COG0160 GabT 4-aminobutyrate a 100.0 2.4E-30 5.3E-35 259.2 28.4 344 31-481 74-446 (447)
25 KOG1357|consensus 100.0 1E-30 2.2E-35 252.2 24.2 355 19-480 137-502 (519)
26 PLN00175 aminotransferase fami 100.0 4.8E-29 1E-33 256.8 34.3 341 18-479 54-412 (413)
27 COG0520 csdA Selenocysteine ly 100.0 2.9E-29 6.3E-34 254.2 31.9 353 8-479 10-404 (405)
28 PRK03244 argD acetylornithine 100.0 3.7E-29 8E-34 257.3 32.0 337 15-482 40-396 (398)
29 PRK04073 rocD ornithine--oxo-a 100.0 2.6E-29 5.7E-34 257.9 30.6 332 16-478 38-395 (396)
30 COG0001 HemL Glutamate-1-semia 100.0 5.6E-29 1.2E-33 244.6 30.6 332 31-482 71-430 (432)
31 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1.2E-28 2.7E-33 250.6 30.6 319 33-481 19-369 (370)
32 PRK09082 methionine aminotrans 100.0 1.5E-28 3.2E-33 251.7 30.9 339 17-476 29-385 (386)
33 PRK07682 hypothetical protein; 100.0 3.5E-28 7.6E-33 248.4 33.5 342 19-481 21-377 (378)
34 TIGR03392 FeS_syn_CsdA cystein 100.0 3.5E-28 7.5E-33 250.2 32.6 346 17-481 16-396 (398)
35 PRK05093 argD bifunctional N-s 100.0 4E-28 8.7E-33 249.7 32.8 337 15-481 37-401 (403)
36 PRK01278 argD acetylornithine 100.0 3E-28 6.5E-33 249.7 31.7 334 15-480 28-388 (389)
37 PRK12414 putative aminotransfe 100.0 6.4E-28 1.4E-32 246.7 33.4 339 16-476 27-383 (384)
38 PRK07681 aspartate aminotransf 100.0 8.2E-28 1.8E-32 247.3 33.8 340 16-476 30-384 (399)
39 PRK06207 aspartate aminotransf 100.0 1.2E-27 2.5E-32 246.2 34.9 347 19-482 40-404 (405)
40 TIGR03576 pyridox_MJ0158 pyrid 100.0 2.8E-28 6E-33 244.2 29.2 304 26-478 27-345 (346)
41 PRK06108 aspartate aminotransf 100.0 6.2E-28 1.4E-32 247.1 32.4 341 19-479 25-381 (382)
42 PRK10874 cysteine sulfinate de 100.0 7.5E-28 1.6E-32 248.0 33.0 345 18-481 20-399 (401)
43 TIGR01885 Orn_aminotrans ornit 100.0 4.7E-28 1E-32 249.1 31.4 338 15-478 34-400 (401)
44 COG1167 ARO8 Transcriptional r 100.0 8.7E-28 1.9E-32 249.2 33.5 344 18-481 89-456 (459)
45 PRK07366 succinyldiaminopimela 100.0 9.4E-28 2E-32 246.1 32.7 342 16-477 28-387 (388)
46 PRK12381 bifunctional succinyl 100.0 5.4E-28 1.2E-32 248.6 31.0 338 15-482 36-401 (406)
47 TIGR03540 DapC_direct LL-diami 100.0 1.2E-27 2.7E-32 244.8 33.4 342 15-476 26-382 (383)
48 PRK09276 LL-diaminopimelate am 100.0 1.5E-27 3.3E-32 244.3 34.1 341 16-476 29-384 (385)
49 PRK00854 rocD ornithine--oxo-a 100.0 6.9E-28 1.5E-32 248.2 31.5 334 16-479 39-400 (401)
50 PRK08960 hypothetical protein; 100.0 1.9E-27 4E-32 243.7 34.5 342 16-479 30-386 (387)
51 PRK05957 aspartate aminotransf 100.0 1.7E-27 3.7E-32 243.9 34.0 342 19-481 28-386 (389)
52 PRK11522 putrescine--2-oxoglut 100.0 5.1E-28 1.1E-32 250.1 30.1 352 16-483 80-454 (459)
53 PRK08068 transaminase; Reviewe 100.0 1.5E-27 3.3E-32 244.5 33.4 341 16-476 30-385 (389)
54 TIGR03372 putres_am_tran putre 100.0 7E-28 1.5E-32 247.4 30.7 347 16-478 73-442 (442)
55 PRK09295 bifunctional cysteine 100.0 1.5E-27 3.2E-32 246.1 32.7 342 19-479 25-403 (406)
56 PLN00144 acetylornithine trans 100.0 7.5E-28 1.6E-32 244.9 30.0 352 15-481 12-381 (382)
57 PF00155 Aminotran_1_2: Aminot 100.0 9.6E-29 2.1E-33 251.3 23.2 331 19-474 2-363 (363)
58 PRK08912 hypothetical protein; 100.0 2.1E-27 4.6E-32 243.3 33.3 342 18-480 26-386 (387)
59 PRK02936 argD acetylornithine 100.0 9.9E-28 2.1E-32 245.0 30.7 331 15-477 26-376 (377)
60 PRK05942 aspartate aminotransf 100.0 2.8E-27 6.1E-32 242.9 34.2 341 16-476 33-388 (394)
61 PRK13034 serine hydroxymethylt 100.0 1.3E-27 2.9E-32 245.6 31.6 341 19-481 30-393 (416)
62 KOG1358|consensus 100.0 1.6E-28 3.4E-33 233.1 22.5 358 14-480 90-465 (467)
63 PRK07324 transaminase; Validat 100.0 2.3E-27 5.1E-32 241.4 31.6 321 30-481 40-371 (373)
64 PRK03715 argD acetylornithine 100.0 2.4E-27 5.3E-32 241.8 31.7 336 16-481 34-394 (395)
65 PRK06348 aspartate aminotransf 100.0 3.5E-27 7.6E-32 241.3 32.7 339 18-477 29-382 (384)
66 PRK07309 aromatic amino acid a 100.0 7.4E-27 1.6E-31 239.4 34.8 343 18-481 30-389 (391)
67 PRK05764 aspartate aminotransf 100.0 4.8E-27 1E-31 241.4 33.4 344 16-481 29-392 (393)
68 PTZ00125 ornithine aminotransf 100.0 2.3E-27 5E-32 244.3 31.0 338 16-482 29-397 (400)
69 PLN02760 4-aminobutyrate:pyruv 100.0 3.3E-27 7E-32 246.4 32.1 364 15-481 86-492 (504)
70 PRK09148 aminotransferase; Val 100.0 6.4E-27 1.4E-31 240.8 33.7 348 15-482 27-392 (405)
71 PRK07683 aminotransferase A; V 100.0 9.9E-27 2.1E-31 238.2 34.3 341 18-480 28-383 (387)
72 TIGR01979 sufS cysteine desulf 100.0 3.3E-27 7.1E-32 243.5 30.6 344 19-481 20-402 (403)
73 PRK06290 aspartate aminotransf 100.0 9E-27 2E-31 239.4 33.6 343 16-482 42-407 (410)
74 PRK08636 aspartate aminotransf 100.0 1E-26 2.2E-31 239.4 33.8 349 16-481 31-401 (403)
75 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 6.4E-27 1.4E-31 239.3 31.9 338 20-483 20-384 (387)
76 PRK02731 histidinol-phosphate 100.0 7.2E-27 1.6E-31 237.9 31.8 326 16-479 30-365 (367)
77 PTZ00433 tyrosine aminotransfe 100.0 1.5E-26 3.3E-31 238.6 34.5 344 16-482 31-410 (412)
78 PLN02624 ornithine-delta-amino 100.0 5.6E-27 1.2E-31 244.4 31.4 340 15-480 72-444 (474)
79 PRK07550 hypothetical protein; 100.0 9.3E-27 2E-31 238.5 32.6 343 16-477 27-384 (386)
80 PRK07337 aminotransferase; Val 100.0 1.4E-26 3.1E-31 237.4 33.3 341 16-478 28-387 (388)
81 PLN02855 Bifunctional selenocy 100.0 8.1E-27 1.7E-31 241.8 31.6 340 19-481 34-419 (424)
82 PRK06107 aspartate aminotransf 100.0 1.9E-26 4.1E-31 237.3 33.9 344 16-481 31-401 (402)
83 PRK07482 hypothetical protein; 100.0 1.5E-26 3.3E-31 240.1 33.2 371 16-481 48-455 (461)
84 cd00610 OAT_like Acetyl ornith 100.0 6.2E-27 1.3E-31 242.3 30.2 340 15-477 33-412 (413)
85 PRK03158 histidinol-phosphate 100.0 5.5E-27 1.2E-31 237.9 29.1 320 19-477 30-358 (359)
86 PRK08361 aspartate aminotransf 100.0 1.2E-26 2.5E-31 238.2 31.8 341 18-480 33-390 (391)
87 PRK09147 succinyldiaminopimela 100.0 1.7E-26 3.7E-31 237.3 32.8 340 16-479 27-395 (396)
88 TIGR03537 DapC succinyldiamino 100.0 1.4E-26 3E-31 234.0 31.6 331 20-476 2-349 (350)
89 COG1168 MalY Bifunctional PLP- 100.0 3.1E-26 6.8E-31 218.9 31.9 334 28-481 37-387 (388)
90 KOG0257|consensus 100.0 1.3E-27 2.8E-32 230.6 22.5 333 31-475 46-414 (420)
91 PRK06225 aspartate aminotransf 100.0 2E-26 4.4E-31 235.5 32.6 338 17-482 27-378 (380)
92 PRK08175 aminotransferase; Val 100.0 4.5E-26 9.8E-31 234.0 35.3 348 15-482 26-391 (395)
93 PRK05965 hypothetical protein; 100.0 1.3E-26 2.8E-31 240.5 31.3 218 246-481 202-448 (459)
94 PRK07495 4-aminobutyrate amino 100.0 1.6E-26 3.5E-31 237.7 31.7 220 245-482 183-423 (425)
95 PRK07678 aminotransferase; Val 100.0 1.3E-26 2.9E-31 240.1 31.4 223 248-481 202-450 (451)
96 PRK07777 aminotransferase; Val 100.0 2.6E-26 5.6E-31 235.4 33.2 342 18-478 24-384 (387)
97 PRK08117 4-aminobutyrate amino 100.0 1.8E-26 3.8E-31 239.2 32.2 361 15-481 40-430 (433)
98 PRK09792 4-aminobutyrate trans 100.0 1.2E-26 2.5E-31 239.0 30.6 344 16-479 38-420 (421)
99 PRK08360 4-aminobutyrate amino 100.0 3.4E-26 7.4E-31 236.3 33.8 218 245-482 189-428 (443)
100 TIGR02407 ectoine_ectB diamino 100.0 9.6E-27 2.1E-31 239.0 29.3 219 244-480 177-412 (412)
101 PLN00145 tyrosine/nicotianamin 100.0 4.2E-26 9E-31 235.9 34.1 344 17-483 51-427 (430)
102 PRK15481 transcriptional regul 100.0 1.5E-26 3.2E-31 240.3 30.9 292 63-479 124-430 (431)
103 PRK08363 alanine aminotransfer 100.0 2.8E-26 6E-31 235.9 32.3 346 15-480 27-394 (398)
104 PLN02187 rooty/superroot1 100.0 4.5E-26 9.7E-31 237.3 33.9 347 17-483 65-441 (462)
105 PRK06062 hypothetical protein; 100.0 1.7E-26 3.6E-31 239.1 30.1 220 245-482 200-447 (451)
106 COG0079 HisC Histidinol-phosph 100.0 1.9E-26 4.1E-31 230.0 29.3 268 195-480 75-354 (356)
107 COG1104 NifS Cysteine sulfinat 100.0 2.5E-26 5.3E-31 224.2 29.2 325 31-483 14-380 (386)
108 PRK06777 4-aminobutyrate amino 100.0 2.6E-26 5.6E-31 236.4 31.0 342 16-479 38-420 (421)
109 PRK02948 cysteine desulfurase; 100.0 2.7E-26 5.9E-31 234.8 30.7 336 20-481 3-375 (381)
110 PRK05964 adenosylmethionine--8 100.0 3E-26 6.6E-31 236.7 31.2 351 16-481 40-423 (423)
111 TIGR00700 GABAtrnsam 4-aminobu 100.0 2.8E-26 6E-31 236.7 30.6 355 16-479 31-419 (420)
112 PRK07590 L,L-diaminopimelate a 100.0 2.9E-26 6.3E-31 236.5 30.7 347 17-477 33-408 (409)
113 TIGR01264 tyr_amTase_E tyrosin 100.0 5.8E-26 1.3E-30 233.8 32.3 338 16-480 29-399 (401)
114 cd06451 AGAT_like Alanine-glyo 100.0 2.9E-26 6.3E-31 232.5 29.7 296 59-478 31-355 (356)
115 PRK01533 histidinol-phosphate 100.0 1.5E-26 3.3E-31 234.4 27.4 319 17-481 28-356 (366)
116 TIGR01976 am_tr_V_VC1184 cyste 100.0 3.5E-26 7.6E-31 235.3 30.5 337 19-474 19-397 (397)
117 PRK06541 hypothetical protein; 100.0 6.8E-26 1.5E-30 234.9 32.6 370 16-481 50-456 (460)
118 PRK02627 acetylornithine amino 100.0 5E-26 1.1E-30 234.1 31.4 336 15-481 36-395 (396)
119 TIGR00707 argD acetylornithine 100.0 4.4E-26 9.6E-31 233.1 30.7 333 15-477 24-378 (379)
120 PRK04612 argD acetylornithine 100.0 4.6E-26 1E-30 233.0 30.7 344 16-481 38-404 (408)
121 PRK09264 diaminobutyrate--2-ox 100.0 3.5E-26 7.6E-31 235.9 29.7 221 243-481 180-417 (425)
122 COG0161 BioA Adenosylmethionin 100.0 1.9E-26 4.1E-31 229.7 26.1 359 16-482 34-445 (449)
123 PRK13360 omega amino acid--pyr 100.0 8.5E-26 1.8E-30 233.2 31.9 366 16-481 44-441 (442)
124 PRK08593 4-aminobutyrate amino 100.0 9E-26 1.9E-30 233.5 32.0 207 257-482 205-431 (445)
125 TIGR03538 DapC_gpp succinyldia 100.0 8.7E-26 1.9E-30 231.8 31.4 338 16-477 26-392 (393)
126 PRK07865 N-succinyldiaminopime 100.0 1.6E-25 3.5E-30 227.5 32.6 322 16-475 25-363 (364)
127 TIGR01265 tyr_nico_aTase tyros 100.0 1.1E-25 2.4E-30 231.7 31.8 339 16-481 29-402 (403)
128 PRK07483 hypothetical protein; 100.0 1E-25 2.2E-30 232.7 31.5 375 16-481 28-438 (443)
129 PRK12403 putative aminotransfe 100.0 1.1E-25 2.4E-30 233.6 31.8 359 16-481 52-453 (460)
130 PRK06058 4-aminobutyrate amino 100.0 8.5E-26 1.8E-30 234.1 30.8 207 257-481 217-443 (443)
131 PLN02656 tyrosine transaminase 100.0 1.7E-25 3.7E-30 230.5 32.9 344 15-481 28-404 (409)
132 PTZ00377 alanine aminotransfer 100.0 1.7E-25 3.6E-30 235.0 33.2 337 33-481 92-476 (481)
133 PLN00143 tyrosine/nicotianamin 100.0 2.7E-25 5.9E-30 228.9 33.3 344 15-481 29-405 (409)
134 TIGR03539 DapC_actino succinyl 100.0 3.8E-25 8.3E-30 224.1 33.8 323 15-474 18-356 (357)
135 PRK08153 histidinol-phosphate 100.0 2E-25 4.3E-30 227.0 31.8 327 16-482 29-367 (369)
136 PRK06943 adenosylmethionine--8 100.0 2.2E-25 4.7E-30 230.7 32.5 365 16-481 52-447 (453)
137 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.4E-25 3.1E-30 229.1 30.7 335 21-476 3-375 (376)
138 TIGR03402 FeS_nifS cysteine de 99.9 1.2E-25 2.5E-30 230.0 29.9 335 21-482 3-374 (379)
139 cd06502 TA_like Low-specificit 99.9 2.5E-26 5.4E-31 231.2 24.5 323 22-476 1-337 (338)
140 PRK06918 4-aminobutyrate amino 99.9 1.8E-25 3.8E-30 232.5 31.5 207 257-481 217-444 (451)
141 PRK13355 bifunctional HTH-doma 99.9 2.7E-25 5.8E-30 235.4 33.2 343 15-481 143-515 (517)
142 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1.8E-25 3.8E-30 227.0 30.3 321 33-478 12-360 (361)
143 TIGR03403 nifS_epsilon cystein 99.9 1.6E-25 3.5E-30 229.1 30.1 218 252-482 133-377 (382)
144 PRK06173 adenosylmethionine--8 99.9 2.6E-25 5.6E-30 228.6 31.6 360 16-481 42-426 (429)
145 PRK06855 aminotransferase; Val 99.9 2.9E-25 6.3E-30 230.1 32.2 228 244-481 158-430 (433)
146 PRK06105 aminotransferase; Pro 99.9 2.5E-25 5.5E-30 230.9 31.6 218 246-481 205-450 (460)
147 PRK07480 putative aminotransfe 99.9 2.3E-25 4.9E-30 230.8 31.2 364 16-481 48-449 (456)
148 PRK05639 4-aminobutyrate amino 99.9 2.1E-25 4.5E-30 230.9 30.8 206 257-481 220-444 (457)
149 cd06453 SufS_like Cysteine des 99.9 1.3E-25 2.9E-30 229.1 28.9 322 31-474 12-373 (373)
150 PRK05839 hypothetical protein; 99.9 3.1E-25 6.8E-30 225.9 31.5 334 17-479 23-373 (374)
151 PRK09221 beta alanine--pyruvat 99.9 4E-25 8.8E-30 228.4 32.5 366 16-481 47-444 (445)
152 PRK00950 histidinol-phosphate 99.9 1.1E-25 2.3E-30 228.8 27.7 320 17-478 33-360 (361)
153 PLN02376 1-aminocyclopropane-1 99.9 1.6E-25 3.4E-30 234.4 29.7 314 55-481 93-439 (496)
154 PRK07046 aminotransferase; Val 99.9 2.7E-25 5.8E-30 229.8 30.9 340 16-481 73-451 (453)
155 PLN02409 serine--glyoxylate am 99.9 3.9E-25 8.5E-30 227.0 32.0 306 58-483 40-375 (401)
156 PLN02482 glutamate-1-semialdeh 99.9 3.3E-25 7.1E-30 229.4 31.2 343 16-480 97-473 (474)
157 TIGR01141 hisC histidinol-phos 99.9 1.4E-25 3.1E-30 226.5 28.0 318 18-475 19-346 (346)
158 PRK06917 hypothetical protein; 99.9 3.3E-25 7.1E-30 229.2 30.8 373 16-481 29-438 (447)
159 PRK09105 putative aminotransfe 99.9 5.4E-25 1.2E-29 223.6 31.7 315 20-478 45-368 (370)
160 PRK07036 hypothetical protein; 99.9 4.8E-25 1E-29 229.0 31.8 218 247-481 208-453 (466)
161 PRK06425 histidinol-phosphate 99.9 3.8E-25 8.3E-30 221.7 30.0 262 196-478 58-331 (332)
162 PRK06938 diaminobutyrate--2-ox 99.9 3.4E-25 7.3E-30 229.8 30.4 218 245-481 215-461 (464)
163 PRK07030 adenosylmethionine--8 99.9 4.3E-25 9.3E-30 229.1 31.2 364 16-481 45-447 (466)
164 PRK06082 4-aminobutyrate amino 99.9 3.5E-25 7.6E-30 229.5 30.3 350 16-483 70-454 (459)
165 PLN02450 1-aminocyclopropane-1 99.9 3.2E-25 6.9E-30 231.3 29.9 232 245-482 175-432 (468)
166 PRK04013 argD acetylornithine/ 99.9 4.4E-25 9.6E-30 221.6 29.4 327 15-481 21-361 (364)
167 PRK07986 adenosylmethionine--8 99.9 3E-25 6.4E-30 227.8 28.7 354 16-480 41-423 (428)
168 PRK06358 threonine-phosphate d 99.9 8E-25 1.7E-29 221.3 31.5 322 19-478 20-353 (354)
169 TIGR03542 DAPAT_plant LL-diami 99.9 6.4E-25 1.4E-29 226.0 31.0 214 258-477 172-401 (402)
170 PRK07481 hypothetical protein; 99.9 8.9E-25 1.9E-29 226.3 32.1 354 16-482 40-447 (449)
171 TIGR00709 dat 2,4-diaminobutyr 99.9 7.9E-25 1.7E-29 226.7 31.7 205 258-481 205-436 (442)
172 PRK07568 aspartate aminotransf 99.9 1.6E-24 3.4E-29 223.1 33.6 217 257-481 160-393 (397)
173 PRK05769 4-aminobutyrate amino 99.9 7.4E-25 1.6E-29 226.4 31.1 202 257-481 219-440 (441)
174 PLN03026 histidinol-phosphate 99.9 6.8E-25 1.5E-29 223.7 30.4 321 17-477 51-379 (380)
175 PRK13580 serine hydroxymethylt 99.9 6E-25 1.3E-29 223.5 29.6 228 244-481 208-446 (493)
176 PRK05387 histidinol-phosphate 99.9 5.1E-25 1.1E-29 223.1 29.2 321 18-479 24-352 (353)
177 PRK06931 diaminobutyrate--2-ox 99.9 6.2E-25 1.3E-29 227.7 30.0 205 258-481 224-455 (459)
178 PRK14807 histidinol-phosphate 99.9 1E-24 2.2E-29 220.5 30.7 320 19-478 23-350 (351)
179 PRK08742 adenosylmethionine--8 99.9 1.6E-24 3.6E-29 224.6 32.7 366 16-482 62-469 (472)
180 PRK06916 adenosylmethionine--8 99.9 1.1E-24 2.3E-29 226.2 30.9 364 16-481 54-456 (460)
181 PRK03317 histidinol-phosphate 99.9 1E-24 2.3E-29 221.9 30.2 322 20-480 28-364 (368)
182 PRK12389 glutamate-1-semialdeh 99.9 2.1E-24 4.5E-29 222.8 32.6 342 16-480 51-427 (428)
183 TIGR02006 IscS cysteine desulf 99.9 7.8E-25 1.7E-29 225.3 29.4 337 19-482 5-379 (402)
184 PRK05166 histidinol-phosphate 99.9 1.1E-24 2.5E-29 221.7 30.2 324 18-478 36-369 (371)
185 PRK00615 glutamate-1-semialdeh 99.9 6.1E-25 1.3E-29 225.6 28.2 344 16-481 51-429 (433)
186 KOG1402|consensus 99.9 4.3E-25 9.3E-30 205.3 24.1 344 16-479 49-426 (427)
187 PRK05630 adenosylmethionine--8 99.9 7.7E-25 1.7E-29 224.8 28.4 357 16-480 38-420 (422)
188 PLN03226 serine hydroxymethylt 99.9 2.4E-24 5.1E-29 223.3 31.7 340 20-480 36-419 (475)
189 PRK06149 hypothetical protein; 99.9 1.2E-24 2.6E-29 244.5 31.8 351 16-480 583-970 (972)
190 PRK07392 threonine-phosphate d 99.9 3.1E-24 6.8E-29 217.7 32.0 328 19-479 23-358 (360)
191 PRK04260 acetylornithine amino 99.9 1.3E-24 2.8E-29 221.7 29.1 334 15-477 26-374 (375)
192 PRK08297 L-lysine aminotransfe 99.9 6.5E-25 1.4E-29 226.8 27.2 218 244-481 211-442 (443)
193 PRK08056 threonine-phosphate d 99.9 2.9E-24 6.3E-29 217.5 31.4 207 257-479 140-354 (356)
194 PLN02607 1-aminocyclopropane-1 99.9 1.2E-24 2.6E-29 225.2 29.1 233 244-482 183-439 (447)
195 PRK04870 histidinol-phosphate 99.9 1.6E-24 3.4E-29 219.7 29.3 322 17-477 25-355 (356)
196 cd00609 AAT_like Aspartate ami 99.9 4.3E-24 9.3E-29 215.6 32.2 327 28-475 10-349 (350)
197 PLN02651 cysteine desulfurase 99.9 6.2E-25 1.3E-29 223.2 25.7 316 31-468 12-364 (364)
198 PRK06148 hypothetical protein; 99.9 1.3E-24 2.9E-29 244.1 30.6 348 16-481 622-1011(1013)
199 cd00378 SHMT Serine-glycine hy 99.9 2.2E-24 4.8E-29 222.3 29.8 345 19-482 20-387 (402)
200 PRK07908 hypothetical protein; 99.9 3.4E-24 7.4E-29 216.5 30.5 319 16-479 20-346 (349)
201 PLN02231 alanine transaminase 99.9 6.5E-24 1.4E-28 223.5 33.7 339 32-481 143-528 (534)
202 PLN02721 threonine aldolase 99.9 1.9E-24 4E-29 219.0 28.7 329 18-480 5-352 (353)
203 KOG1404|consensus 99.9 8.7E-25 1.9E-29 208.2 24.2 340 31-474 68-432 (442)
204 PRK09265 aminotransferase AlaT 99.9 7.8E-24 1.7E-28 218.1 33.4 340 14-481 29-402 (404)
205 PRK00062 glutamate-1-semialdeh 99.9 2.9E-24 6.4E-29 221.9 29.7 347 15-481 47-425 (426)
206 TIGR00508 bioA adenosylmethion 99.9 5.5E-24 1.2E-28 219.3 31.3 354 16-480 43-426 (427)
207 PRK03321 putative aminotransfe 99.9 2.8E-24 6.2E-29 217.5 28.7 319 19-479 23-350 (352)
208 PRK13238 tnaA tryptophanase/L- 99.9 2E-24 4.4E-29 223.5 28.0 377 15-502 33-455 (460)
209 PRK14809 histidinol-phosphate 99.9 4.9E-24 1.1E-28 216.1 30.2 320 16-479 28-356 (357)
210 TIGR01140 L_thr_O3P_dcar L-thr 99.9 4E-24 8.6E-29 214.2 28.8 273 62-474 49-329 (330)
211 KOG0259|consensus 99.9 1E-23 2.2E-28 200.1 29.4 321 31-481 80-434 (447)
212 PF00266 Aminotran_5: Aminotra 99.9 2.4E-24 5.3E-29 219.5 27.4 318 31-470 12-371 (371)
213 PRK02610 histidinol-phosphate 99.9 4.5E-24 9.8E-29 217.5 28.8 325 20-481 30-372 (374)
214 PRK13520 L-tyrosine decarboxyl 99.9 7.1E-24 1.5E-28 216.2 29.7 323 30-479 32-370 (371)
215 PRK05664 threonine-phosphate d 99.9 1.1E-23 2.5E-28 210.8 29.8 270 63-480 52-328 (330)
216 TIGR01814 kynureninase kynuren 99.9 2E-23 4.4E-28 215.1 32.0 330 19-478 29-405 (406)
217 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.8E-23 3.9E-28 211.9 30.8 219 244-477 112-354 (355)
218 TIGR02326 transamin_PhnW 2-ami 99.9 2.6E-23 5.5E-28 211.4 31.5 221 244-479 116-361 (363)
219 PRK10534 L-threonine aldolase; 99.9 2.2E-24 4.7E-29 216.7 23.3 322 20-479 1-332 (333)
220 PRK06836 aspartate aminotransf 99.9 4.8E-23 1E-27 211.4 33.7 335 18-481 33-392 (394)
221 TIGR00713 hemL glutamate-1-sem 99.9 1.9E-23 4E-28 216.5 30.7 228 236-481 173-423 (423)
222 PRK13479 2-aminoethylphosphona 99.9 3.9E-23 8.4E-28 210.5 32.4 224 244-482 118-365 (368)
223 PLN02672 methionine S-methyltr 99.9 2.7E-23 5.8E-28 228.3 33.2 338 16-479 695-1079(1082)
224 PRK08088 4-aminobutyrate amino 99.9 2.1E-23 4.6E-28 215.7 30.7 347 16-481 39-424 (425)
225 PRK14012 cysteine desulfurase; 99.9 1.1E-23 2.4E-28 217.0 28.3 339 19-482 5-381 (404)
226 PRK06959 putative threonine-ph 99.9 1.6E-23 3.4E-28 210.3 28.5 199 260-482 131-335 (339)
227 PRK00011 glyA serine hydroxyme 99.9 5.8E-23 1.3E-27 212.6 32.1 343 18-481 25-390 (416)
228 TIGR03812 tyr_de_CO2_Arch tyro 99.9 4.6E-23 9.9E-28 210.4 30.3 322 30-476 32-372 (373)
229 PRK04635 histidinol-phosphate 99.9 8.9E-24 1.9E-28 213.8 24.6 202 258-477 146-352 (354)
230 PRK04781 histidinol-phosphate 99.9 4.3E-23 9.3E-28 209.4 28.9 205 257-478 150-361 (364)
231 PRK08354 putative aminotransfe 99.9 1.4E-22 3.1E-27 201.2 31.5 293 19-477 9-309 (311)
232 cd00613 GDC-P Glycine cleavage 99.9 1.6E-23 3.5E-28 215.6 25.5 298 55-474 59-398 (398)
233 PRK14808 histidinol-phosphate 99.9 4.7E-23 1E-27 206.6 28.1 308 16-477 17-334 (335)
234 TIGR00699 GABAtrns_euk 4-amino 99.9 2.4E-23 5.2E-28 214.2 26.5 213 244-477 237-463 (464)
235 TIGR01437 selA_rel uncharacter 99.9 2.6E-23 5.5E-28 210.4 26.3 324 30-477 25-362 (363)
236 PRK01688 histidinol-phosphate 99.9 9.3E-24 2E-28 213.3 23.0 283 62-475 59-351 (351)
237 PRK09440 avtA valine--pyruvate 99.9 1.5E-22 3.2E-27 209.6 32.5 216 257-481 177-412 (416)
238 PLN02397 aspartate transaminas 99.9 3.7E-23 8E-28 213.6 27.7 215 244-479 180-420 (423)
239 PTZ00094 serine hydroxymethylt 99.9 6.8E-23 1.5E-27 213.3 29.7 347 19-480 35-408 (452)
240 PTZ00376 aspartate aminotransf 99.9 5.7E-23 1.2E-27 211.5 28.2 335 18-480 29-403 (404)
241 PRK09275 aspartate aminotransf 99.9 8.6E-23 1.9E-27 212.1 28.3 226 245-482 227-519 (527)
242 TIGR03251 LAT_fam L-lysine 6-t 99.9 8.2E-23 1.8E-27 211.0 27.2 344 31-476 56-430 (431)
243 COG2008 GLY1 Threonine aldolas 99.9 6.8E-23 1.5E-27 195.9 23.8 327 20-478 1-341 (342)
244 KOG1401|consensus 99.9 6.6E-23 1.4E-27 197.0 23.6 351 15-482 53-432 (433)
245 PRK09257 aromatic amino acid a 99.9 5.1E-23 1.1E-27 211.5 24.5 331 19-477 27-395 (396)
246 cd00614 CGS_like CGS_like: Cys 99.9 8.6E-23 1.9E-27 207.4 25.4 286 58-478 38-368 (369)
247 PLN02242 methionine gamma-lyas 99.9 9.9E-23 2.1E-27 208.8 25.9 293 59-482 75-417 (418)
248 TIGR03801 asp_4_decarbox aspar 99.9 2.5E-22 5.4E-27 208.4 28.5 223 245-481 226-517 (521)
249 PRK08637 hypothetical protein; 99.9 8E-22 1.7E-26 202.0 29.3 227 244-481 131-387 (388)
250 cd00617 Tnase_like Tryptophana 99.9 5.1E-22 1.1E-26 202.8 27.0 359 32-501 32-429 (431)
251 COG0399 WecE Predicted pyridox 99.9 2.3E-21 5.1E-26 191.4 30.7 311 32-480 15-373 (374)
252 PRK03967 histidinol-phosphate 99.9 9.3E-22 2E-26 197.6 28.5 313 17-482 17-336 (337)
253 KOG1368|consensus 99.9 1.5E-22 3.3E-27 186.0 20.5 335 19-485 22-374 (384)
254 TIGR03235 DNA_S_dndA cysteine 99.9 1.8E-22 3.9E-27 204.4 23.3 305 30-459 10-339 (353)
255 PRK06234 methionine gamma-lyas 99.9 7E-22 1.5E-26 202.2 26.8 288 59-479 63-396 (400)
256 PLN02724 Molybdenum cofactor s 99.9 9.1E-22 2E-26 217.5 29.6 359 17-481 34-489 (805)
257 cd00616 AHBA_syn 3-amino-5-hyd 99.9 2.3E-21 5E-26 196.3 29.9 290 59-475 17-352 (352)
258 PRK08133 O-succinylhomoserine 99.9 7.7E-22 1.7E-26 201.2 26.2 243 59-431 60-326 (390)
259 cd06450 DOPA_deC_like DOPA dec 99.9 7.3E-22 1.6E-26 199.3 24.7 282 57-476 35-344 (345)
260 KOG0634|consensus 99.9 4.1E-21 8.9E-26 185.6 28.2 291 78-481 127-467 (472)
261 PRK05968 hypothetical protein; 99.9 1.3E-21 2.8E-26 199.5 26.3 287 58-475 61-385 (389)
262 TIGR01328 met_gam_lyase methio 99.9 1.7E-21 3.6E-26 198.7 26.2 288 60-480 59-390 (391)
263 TIGR02379 ECA_wecE TDP-4-keto- 99.9 3.9E-21 8.6E-26 194.9 28.9 312 32-478 11-375 (376)
264 PRK06767 methionine gamma-lyas 99.9 1.2E-21 2.7E-26 199.7 25.2 285 60-479 61-384 (386)
265 PRK08249 cystathionine gamma-s 99.9 3.2E-21 7E-26 196.7 28.0 214 59-402 63-280 (398)
266 COG0075 Serine-pyruvate aminot 99.9 3.1E-20 6.8E-25 183.0 33.5 300 59-483 37-366 (383)
267 PRK08247 cystathionine gamma-s 99.9 2.1E-21 4.5E-26 196.8 25.5 287 59-480 51-364 (366)
268 PRK06460 hypothetical protein; 99.9 5.1E-21 1.1E-25 194.2 27.1 244 58-431 43-310 (376)
269 TIGR01324 cysta_beta_ly_B cyst 99.9 4.1E-21 8.8E-26 194.4 26.3 285 60-479 50-375 (377)
270 KOG1403|consensus 99.9 7.5E-22 1.6E-26 181.4 18.8 369 9-481 30-438 (452)
271 PF00202 Aminotran_3: Aminotra 99.9 4.3E-22 9.2E-27 199.3 18.8 296 15-419 13-338 (339)
272 TIGR01325 O_suc_HS_sulf O-succ 99.9 5.1E-21 1.1E-25 194.8 26.6 243 59-431 53-318 (380)
273 PRK06209 glutamate-1-semialdeh 99.9 6.8E-21 1.5E-25 196.7 27.3 220 237-481 166-406 (431)
274 PRK08574 cystathionine gamma-s 99.9 2.9E-21 6.3E-26 196.4 23.6 212 59-402 52-269 (385)
275 PRK07810 O-succinylhomoserine 99.9 4.5E-21 9.8E-26 196.0 24.7 213 60-402 70-287 (403)
276 PRK07504 O-succinylhomoserine 99.9 7.4E-21 1.6E-25 194.4 24.8 287 59-480 64-395 (398)
277 PRK02769 histidine decarboxyla 99.9 5.1E-20 1.1E-24 186.1 30.2 296 58-481 63-373 (380)
278 PRK11658 UDP-4-amino-4-deoxy-L 99.9 5.1E-20 1.1E-24 187.6 30.4 312 32-478 14-377 (379)
279 KOG1549|consensus 99.9 1.5E-20 3.3E-25 184.3 25.3 344 19-483 45-421 (428)
280 PRK07503 methionine gamma-lyas 99.9 4.7E-20 1E-24 188.8 30.2 216 59-402 64-283 (403)
281 PRK08064 cystathionine beta-ly 99.9 1.8E-20 3.8E-25 191.3 26.5 283 59-476 53-382 (390)
282 PF01041 DegT_DnrJ_EryC1: DegT 99.9 3.2E-20 7E-25 188.2 28.2 309 32-475 5-363 (363)
283 PLN02974 adenosylmethionine-8- 99.9 3.9E-20 8.4E-25 201.0 30.3 218 246-478 567-816 (817)
284 KOG0256|consensus 99.9 3.1E-20 6.6E-25 178.1 25.6 231 244-480 209-461 (471)
285 TIGR01788 Glu-decarb-GAD gluta 99.9 5.2E-20 1.1E-24 188.5 29.0 332 31-481 54-430 (431)
286 PRK09028 cystathionine beta-ly 99.9 1.7E-20 3.7E-25 189.9 25.1 242 60-431 61-327 (394)
287 TIGR01329 cysta_beta_ly_E cyst 99.9 1.9E-20 4.2E-25 190.2 25.5 286 60-481 47-376 (378)
288 PRK07050 cystathionine beta-ly 99.9 1.9E-20 4.1E-25 191.0 25.1 286 59-475 64-390 (394)
289 PRK07811 cystathionine gamma-s 99.9 2.1E-20 4.6E-25 190.5 25.1 243 59-431 60-327 (388)
290 TIGR03588 PseC UDP-4-keto-6-de 99.9 9.5E-20 2.1E-24 186.2 29.9 317 32-478 10-380 (380)
291 PRK04366 glycine dehydrogenase 99.9 6.4E-20 1.4E-24 192.0 29.1 331 30-482 82-450 (481)
292 PRK07049 methionine gamma-lyas 99.9 4.7E-20 1E-24 189.8 26.6 217 60-402 83-311 (427)
293 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 1.9E-19 4E-24 183.5 30.0 309 35-478 14-374 (375)
294 PLN02509 cystathionine beta-ly 99.9 4.3E-20 9.4E-25 190.2 25.2 284 60-479 133-460 (464)
295 PRK08861 cystathionine gamma-s 99.9 7.9E-20 1.7E-24 185.2 26.4 214 59-402 52-270 (388)
296 PRK08776 cystathionine gamma-s 99.9 1.5E-19 3.2E-24 184.8 28.3 214 59-402 59-277 (405)
297 PRK08114 cystathionine beta-ly 99.9 6.7E-20 1.5E-24 184.9 24.2 214 59-402 61-280 (395)
298 PLN02368 alanine transaminase 99.9 4.6E-20 1E-24 188.7 23.2 253 54-415 105-391 (407)
299 PRK08045 cystathionine gamma-s 99.9 1.9E-19 4.2E-24 182.9 27.3 287 59-480 51-382 (386)
300 PLN03032 serine decarboxylase; 99.9 3.9E-19 8.5E-24 178.3 29.0 318 32-476 37-372 (374)
301 PRK07269 cystathionine gamma-s 99.9 3.3E-20 7.2E-25 187.1 21.4 283 59-478 53-362 (364)
302 PLN02414 glycine dehydrogenase 99.9 1.2E-19 2.7E-24 199.3 26.7 308 55-483 563-910 (993)
303 PRK00451 glycine dehydrogenase 99.9 2.5E-19 5.5E-24 187.1 28.0 296 56-478 108-446 (447)
304 TIGR02080 O_succ_thio_ly O-suc 99.9 1.3E-19 2.9E-24 184.0 25.1 286 59-479 50-380 (382)
305 PRK05939 hypothetical protein; 99.9 2.1E-19 4.6E-24 183.2 25.9 243 59-431 46-332 (397)
306 PRK15407 lipopolysaccharide bi 99.9 1.2E-18 2.6E-23 179.8 31.6 294 60-479 63-435 (438)
307 PRK06176 cystathionine gamma-s 99.9 1.8E-19 4E-24 182.9 25.2 286 59-480 49-378 (380)
308 PRK05967 cystathionine beta-ly 99.9 2.2E-19 4.9E-24 181.4 25.4 288 58-480 62-391 (395)
309 PRK06084 O-acetylhomoserine am 99.8 2.3E-19 5.1E-24 184.3 25.0 287 59-480 57-422 (425)
310 PRK07812 O-acetylhomoserine am 99.8 2.2E-19 4.9E-24 184.3 24.7 289 59-482 68-433 (436)
311 COG0112 GlyA Glycine/serine hy 99.8 1.6E-18 3.5E-23 166.7 28.8 342 19-482 27-392 (413)
312 PLN02271 serine hydroxymethylt 99.8 9.9E-19 2.1E-23 178.7 28.6 331 31-479 161-539 (586)
313 cd00611 PSAT_like Phosphoserin 99.8 3.4E-19 7.3E-24 180.1 25.1 317 29-477 9-353 (355)
314 PRK06702 O-acetylhomoserine am 99.8 2.6E-19 5.6E-24 182.8 24.3 287 59-480 60-424 (432)
315 PRK08134 O-acetylhomoserine am 99.8 4E-19 8.8E-24 182.7 25.7 289 59-481 63-428 (433)
316 PRK07671 cystathionine beta-ly 99.8 3.6E-19 7.9E-24 180.7 24.9 242 59-431 49-314 (377)
317 PRK07582 cystathionine gamma-l 99.8 3.4E-19 7.3E-24 180.4 24.5 279 59-475 50-364 (366)
318 PRK03080 phosphoserine aminotr 99.8 4.8E-19 1.1E-23 180.4 24.8 207 260-482 137-375 (378)
319 PRK08248 O-acetylhomoserine am 99.8 8.5E-19 1.8E-23 180.3 26.2 287 59-480 63-427 (431)
320 PRK05613 O-acetylhomoserine am 99.8 8.7E-19 1.9E-23 180.0 25.7 287 58-479 67-435 (437)
321 TIGR01364 serC_1 phosphoserine 99.8 2.2E-18 4.8E-23 173.0 27.7 202 258-480 129-348 (349)
322 PRK05355 3-phosphoserine/phosp 99.8 1.9E-18 4.1E-23 174.4 26.9 201 258-480 140-358 (360)
323 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 1.7E-18 3.7E-23 174.4 26.0 285 59-478 54-385 (386)
324 PRK05994 O-acetylhomoserine am 99.8 1.6E-18 3.6E-23 178.5 26.2 215 60-402 63-312 (427)
325 COG1103 Archaea-specific pyrid 99.8 8.3E-18 1.8E-22 153.0 25.8 323 37-481 32-381 (382)
326 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 2.6E-18 5.7E-23 176.9 25.7 160 59-341 56-218 (418)
327 PRK13237 tyrosine phenol-lyase 99.8 1.6E-17 3.5E-22 167.4 28.3 339 60-503 78-456 (460)
328 TIGR02618 tyr_phenol_ly tyrosi 99.8 2.5E-17 5.3E-22 165.7 29.5 339 60-502 71-448 (450)
329 COG0626 MetC Cystathionine bet 99.8 1.3E-17 2.8E-22 165.9 25.7 288 59-480 62-394 (396)
330 PRK15029 arginine decarboxylas 99.8 1.1E-17 2.3E-22 179.5 26.9 309 59-481 204-605 (755)
331 PRK04311 selenocysteine syntha 99.8 5.4E-17 1.2E-21 167.3 30.6 325 31-479 99-463 (464)
332 TIGR01366 serC_3 phosphoserine 99.8 6E-18 1.3E-22 171.0 23.0 208 257-481 126-361 (361)
333 TIGR03531 selenium_SpcS O-phos 99.8 9.4E-18 2E-22 171.1 24.2 304 59-477 104-443 (444)
334 PRK06434 cystathionine gamma-l 99.8 7.9E-18 1.7E-22 170.1 23.4 240 59-431 63-320 (384)
335 COG2873 MET17 O-acetylhomoseri 99.8 1.6E-17 3.4E-22 158.2 22.9 307 40-479 42-424 (426)
336 cd00615 Orn_deC_like Ornithine 99.8 1.3E-18 2.9E-23 171.2 14.9 230 59-400 58-293 (294)
337 PRK12566 glycine dehydrogenase 99.8 4.7E-17 1E-21 175.8 25.5 308 55-482 538-878 (954)
338 PF00464 SHMT: Serine hydroxym 99.8 6.8E-17 1.5E-21 161.4 24.5 338 19-474 21-399 (399)
339 TIGR00474 selA seryl-tRNA(sec) 99.8 2.3E-16 5E-21 162.2 28.9 318 31-474 94-453 (454)
340 COG3977 Alanine-alpha-ketoisov 99.8 8.3E-16 1.8E-20 142.0 28.8 216 257-481 177-412 (417)
341 PRK05367 glycine dehydrogenase 99.8 1.6E-16 3.5E-21 175.8 26.5 308 56-483 538-878 (954)
342 KOG1405|consensus 99.7 1.1E-16 2.5E-21 150.6 20.0 374 16-480 66-483 (484)
343 PLN02263 serine decarboxylase 99.7 1.8E-15 3.9E-20 154.2 30.4 297 57-480 130-443 (470)
344 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 4.4E-17 9.6E-22 163.4 18.3 234 58-400 64-315 (417)
345 KOG0633|consensus 99.7 1.5E-16 3.3E-21 144.0 19.3 270 194-477 85-374 (375)
346 KOG2862|consensus 99.7 3.9E-15 8.4E-20 138.4 29.0 236 231-480 112-382 (385)
347 KOG0053|consensus 99.7 4.5E-16 9.8E-21 152.8 23.4 288 59-481 76-407 (409)
348 PLN02590 probable tyrosine dec 99.7 1.9E-15 4.2E-20 157.9 28.8 314 58-483 168-535 (539)
349 PRK13578 ornithine decarboxyla 99.7 1.3E-15 2.7E-20 162.0 27.7 310 59-482 173-567 (720)
350 TIGR00461 gcvP glycine dehydro 99.7 1.1E-15 2.5E-20 166.2 27.9 307 55-483 525-870 (939)
351 PLN02880 tyrosine decarboxylas 99.7 9.6E-16 2.1E-20 160.0 25.7 312 58-481 120-485 (490)
352 PRK15399 lysine decarboxylase 99.7 2.3E-15 5E-20 159.9 28.1 308 59-481 194-560 (713)
353 PRK15400 lysine decarboxylase 99.7 3.1E-15 6.8E-20 158.9 28.6 306 59-480 194-559 (714)
354 PF01212 Beta_elim_lyase: Beta 99.7 2.8E-18 6.1E-23 166.6 4.7 261 22-406 1-274 (290)
355 TIGR03799 NOD_PanD_pyr putativ 99.7 5E-15 1.1E-19 155.0 28.4 225 244-473 248-518 (522)
356 COG3844 Kynureninase [Amino ac 99.7 2.5E-14 5.4E-19 134.0 25.8 212 251-481 158-403 (407)
357 PRK05367 glycine dehydrogenase 99.7 1.4E-14 3E-19 160.6 28.1 326 10-475 67-437 (954)
358 PLN02414 glycine dehydrogenase 99.7 3.8E-14 8.3E-19 156.4 28.7 330 10-476 94-465 (993)
359 COG1448 TyrB Aspartate/tyrosin 99.7 1.4E-14 3.1E-19 139.4 21.5 329 19-477 27-395 (396)
360 cd01494 AAT_I Aspartate aminot 99.6 2E-15 4.3E-20 135.6 13.6 165 62-341 2-170 (170)
361 TIGR02617 tnaA_trp_ase tryptop 99.6 5E-14 1.1E-18 140.5 23.8 375 16-502 39-463 (467)
362 COG0076 GadB Glutamate decarbo 99.6 3.5E-14 7.6E-19 146.0 23.2 293 31-441 75-402 (460)
363 PLN02452 phosphoserine transam 99.6 5.5E-13 1.2E-17 134.1 28.3 201 258-480 144-363 (365)
364 TIGR01365 serC_2 phosphoserine 99.6 6.3E-13 1.4E-17 133.6 25.1 202 263-480 131-373 (374)
365 COG1982 LdcC Arginine/lysine/o 99.5 2.2E-12 4.8E-17 132.0 25.4 295 59-475 69-403 (557)
366 KOG0258|consensus 99.5 2E-12 4.4E-17 123.9 23.1 337 33-480 90-473 (475)
367 PF06838 Met_gamma_lyase: Meth 99.5 2.4E-12 5.2E-17 123.6 20.9 255 59-432 53-331 (403)
368 PRK12462 phosphoserine aminotr 99.5 3E-11 6.6E-16 120.3 26.2 201 259-480 143-362 (364)
369 COG1003 GcvP Glycine cleavage 99.5 2.1E-11 4.5E-16 119.0 22.9 246 229-484 173-451 (496)
370 PF12897 Aminotran_MocR: Alani 99.4 2.8E-11 6E-16 117.1 20.7 240 233-480 144-415 (425)
371 PF00282 Pyridoxal_deC: Pyrido 99.4 1.5E-11 3.2E-16 124.4 19.3 250 59-418 78-372 (373)
372 TIGR00461 gcvP glycine dehydro 99.4 1.3E-10 2.9E-15 127.1 26.9 329 10-475 55-426 (939)
373 PF02347 GDC-P: Glycine cleava 99.4 6.3E-11 1.4E-15 119.2 20.4 199 257-474 195-429 (429)
374 KOG2467|consensus 99.3 2.1E-09 4.5E-14 102.7 24.9 225 244-479 177-425 (477)
375 COG1921 SelA Selenocysteine sy 99.3 1.1E-10 2.3E-15 114.8 16.5 147 227-380 125-273 (395)
376 COG4100 Cystathionine beta-lya 99.3 6.2E-10 1.3E-14 103.5 18.7 257 59-431 64-341 (416)
377 TIGR03811 tyr_de_CO2_Ent tyros 99.2 1.1E-08 2.3E-13 108.6 30.5 173 244-418 261-501 (608)
378 COG0403 GcvP Glycine cleavage 99.2 4.2E-09 9.2E-14 103.2 24.6 334 11-477 67-447 (450)
379 PF03841 SelA: L-seryl-tRNA se 99.2 1.8E-11 3.9E-16 119.2 8.2 232 31-377 19-260 (367)
380 KOG1383|consensus 99.2 3.8E-09 8.3E-14 104.3 22.1 248 225-483 182-449 (491)
381 COG3033 TnaA Tryptophanase [Am 99.1 2E-08 4.4E-13 95.9 23.3 259 244-505 170-469 (471)
382 PF05889 SLA_LP_auto_ag: Solub 99.1 4.4E-09 9.5E-14 103.5 18.4 227 244-479 140-389 (389)
383 PRK12566 glycine dehydrogenase 99.0 9.4E-08 2E-12 104.5 26.2 195 259-475 208-439 (954)
384 KOG2040|consensus 98.9 6E-08 1.3E-12 98.9 18.3 237 231-481 648-919 (1001)
385 KOG1412|consensus 98.9 7.9E-08 1.7E-12 90.1 16.2 219 244-482 164-407 (410)
386 PF04864 Alliinase_C: Allinase 98.8 2.3E-08 5.1E-13 95.9 10.8 263 187-477 58-362 (363)
387 KOG3846|consensus 98.7 1.7E-06 3.7E-11 81.2 19.7 214 249-481 205-462 (465)
388 KOG1411|consensus 98.7 3.1E-07 6.6E-12 87.5 15.0 217 244-479 184-424 (427)
389 COG1932 SerC Phosphoserine ami 98.7 4.2E-06 9.1E-11 81.2 22.5 200 261-481 146-364 (365)
390 KOG0628|consensus 98.7 2.6E-06 5.7E-11 84.4 20.3 196 278-481 254-472 (511)
391 KOG0629|consensus 98.6 2.4E-06 5.2E-11 83.8 18.0 211 261-477 255-506 (510)
392 KOG1360|consensus 98.6 3.8E-07 8.3E-12 88.3 11.8 83 225-307 269-351 (570)
393 PLN02955 8-amino-7-oxononanoat 97.8 1.1E-05 2.3E-10 83.3 1.8 67 151-217 253-319 (476)
394 COG0079 HisC Histidinol-phosph 97.5 0.0044 9.5E-08 62.5 15.7 188 19-239 23-223 (356)
395 KOG1357|consensus 97.4 0.00013 2.8E-09 72.5 3.5 71 147-217 276-347 (519)
396 KOG2040|consensus 97.2 0.025 5.3E-07 59.1 17.6 196 260-475 248-478 (1001)
397 KOG2790|consensus 96.9 0.13 2.8E-06 48.7 17.8 176 288-480 174-368 (370)
398 KOG3843|consensus 96.6 0.027 5.8E-07 52.5 11.2 106 244-354 142-253 (432)
399 PRK06425 histidinol-phosphate 96.6 0.01 2.3E-07 59.4 9.5 119 61-187 41-165 (332)
400 PLN02822 serine palmitoyltrans 96.3 0.032 6.8E-07 58.9 11.4 53 148-200 246-298 (481)
401 PRK00615 glutamate-1-semialdeh 96.0 0.058 1.3E-06 56.0 11.3 64 125-190 180-247 (433)
402 KOG1358|consensus 95.8 0.0066 1.4E-07 59.6 2.8 69 148-216 234-303 (467)
403 TIGR03372 putres_am_tran putre 95.5 0.2 4.4E-06 52.1 13.0 118 63-195 147-274 (442)
404 PRK09064 5-aminolevulinate syn 95.5 0.0073 1.6E-07 62.4 2.1 50 148-197 179-228 (407)
405 TIGR03246 arg_catab_astC succi 95.4 0.12 2.6E-06 53.2 10.8 104 74-196 123-230 (397)
406 TIGR01821 5aminolev_synth 5-am 95.4 0.0093 2E-07 61.5 2.6 51 148-198 178-228 (402)
407 PLN03227 serine palmitoyltrans 95.3 0.023 5E-07 58.3 5.0 57 146-202 137-193 (392)
408 PRK13393 5-aminolevulinate syn 95.2 0.011 2.3E-07 61.2 2.2 51 148-198 178-228 (406)
409 PRK03244 argD acetylornithine 94.8 0.34 7.3E-06 49.8 12.1 102 69-187 122-227 (398)
410 PRK11522 putrescine--2-oxoglut 94.7 0.37 8E-06 50.5 12.2 69 126-196 208-282 (459)
411 PLN02483 serine palmitoyltrans 94.7 0.018 3.9E-07 60.9 2.4 53 148-200 241-293 (489)
412 PLN02994 1-aminocyclopropane-1 94.4 0.039 8.4E-07 48.4 3.3 56 55-112 91-152 (153)
413 PRK13392 5-aminolevulinate syn 94.2 0.025 5.5E-07 58.4 2.2 52 147-198 178-229 (410)
414 KOG1359|consensus 94.1 0.037 8.1E-07 52.4 2.8 32 186-217 232-263 (417)
415 PRK05093 argD bifunctional N-s 93.9 0.4 8.7E-06 49.4 10.4 99 74-190 128-230 (403)
416 cd00614 CGS_like CGS_like: Cys 93.7 0.12 2.6E-06 52.6 5.9 69 119-191 101-169 (369)
417 PLN02482 glutamate-1-semialdeh 93.6 0.67 1.4E-05 48.8 11.4 116 67-190 172-292 (474)
418 COG0156 BioF 7-keto-8-aminopel 93.4 0.53 1.1E-05 47.8 9.8 61 223-286 133-195 (388)
419 PRK13360 omega amino acid--pyr 93.3 1.2 2.6E-05 46.5 12.6 55 133-187 201-259 (442)
420 PRK09221 beta alanine--pyruvat 92.9 1.7 3.7E-05 45.4 13.1 55 133-187 204-262 (445)
421 PRK07810 O-succinylhomoserine 92.9 0.22 4.7E-06 51.3 6.3 74 115-192 127-200 (403)
422 PRK05937 8-amino-7-oxononanoat 92.8 0.11 2.5E-06 52.8 4.1 50 149-198 145-194 (370)
423 COG0520 csdA Selenocysteine ly 92.5 0.76 1.6E-05 47.3 9.6 132 34-191 67-206 (405)
424 TIGR00713 hemL glutamate-1-sem 92.4 1.6 3.5E-05 45.3 12.2 164 16-187 46-239 (423)
425 PRK00854 rocD ornithine--oxo-a 92.1 1.6 3.4E-05 44.9 11.5 60 124-187 168-231 (401)
426 PRK08117 4-aminobutyrate amino 91.8 1.9 4E-05 45.0 11.8 65 131-197 190-259 (433)
427 PRK05939 hypothetical protein; 91.4 0.41 8.9E-06 49.2 6.3 69 117-189 105-173 (397)
428 TIGR03235 DNA_S_dndA cysteine 91.2 0.38 8.1E-06 48.5 5.8 56 132-191 127-182 (353)
429 TIGR01328 met_gam_lyase methio 91.2 0.46 1E-05 48.7 6.4 70 119-192 120-189 (391)
430 PRK03715 argD acetylornithine 91.1 1.2 2.7E-05 45.6 9.5 63 129-197 165-231 (395)
431 PRK07179 hypothetical protein; 90.9 0.12 2.7E-06 53.2 1.9 47 151-197 185-231 (407)
432 TIGR01814 kynureninase kynuren 90.7 0.65 1.4E-05 47.9 7.1 59 132-191 157-215 (406)
433 PRK06234 methionine gamma-lyas 90.5 0.6 1.3E-05 48.1 6.5 72 117-192 123-196 (400)
434 PRK12389 glutamate-1-semialdeh 90.5 1.1 2.4E-05 46.6 8.5 116 64-187 123-244 (428)
435 PRK06209 glutamate-1-semialdeh 90.1 0.45 9.7E-06 49.5 5.2 166 16-190 46-229 (431)
436 PRK08133 O-succinylhomoserine 90.0 0.68 1.5E-05 47.5 6.5 70 118-191 121-190 (390)
437 TIGR01329 cysta_beta_ly_E cyst 90.0 0.58 1.3E-05 47.8 5.9 68 120-191 108-175 (378)
438 PRK07503 methionine gamma-lyas 89.7 0.66 1.4E-05 47.8 6.0 69 119-191 126-194 (403)
439 PRK06062 hypothetical protein; 89.6 3.6 7.8E-05 43.1 11.5 167 16-187 51-258 (451)
440 TIGR01822 2am3keto_CoA 2-amino 88.6 0.26 5.5E-06 50.6 2.1 50 148-197 171-220 (393)
441 TIGR01976 am_tr_V_VC1184 cyste 88.5 1 2.2E-05 46.1 6.5 54 132-189 145-198 (397)
442 PRK05964 adenosylmethionine--8 87.6 5.1 0.00011 41.6 11.0 101 74-186 133-243 (423)
443 PRK14012 cysteine desulfurase; 87.5 4.4 9.5E-05 41.7 10.5 56 132-191 133-188 (404)
444 TIGR01437 selA_rel uncharacter 87.5 1.6 3.5E-05 44.2 7.1 84 100-187 98-189 (363)
445 PRK02948 cysteine desulfurase; 87.4 0.91 2E-05 46.3 5.3 56 131-190 126-181 (381)
446 COG4992 ArgD Ornithine/acetylo 87.4 15 0.00033 37.2 13.5 107 63-187 113-228 (404)
447 PRK07812 O-acetylhomoserine am 87.3 1 2.2E-05 46.9 5.6 66 122-191 133-199 (436)
448 cd06451 AGAT_like Alanine-glyo 86.8 1.7 3.6E-05 43.8 6.8 57 131-190 111-167 (356)
449 TIGR01326 OAH_OAS_sulfhy OAH/O 86.7 1.2 2.6E-05 46.1 5.8 69 118-190 117-185 (418)
450 TIGR01325 O_suc_HS_sulf O-succ 86.6 1.4 3E-05 45.0 6.1 68 119-190 115-182 (380)
451 PLN02855 Bifunctional selenocy 86.6 1.5 3.3E-05 45.4 6.5 55 132-190 162-216 (424)
452 TIGR02006 IscS cysteine desulf 86.6 5.3 0.00012 41.0 10.5 56 132-191 131-186 (402)
453 TIGR03576 pyridox_MJ0158 pyrid 86.5 0.84 1.8E-05 46.0 4.3 47 148-195 137-186 (346)
454 COG0075 Serine-pyruvate aminot 86.3 11 0.00023 38.3 11.9 149 31-202 33-188 (383)
455 cd06453 SufS_like Cysteine des 86.2 1.7 3.6E-05 44.1 6.4 55 132-190 128-182 (373)
456 PF00266 Aminotran_5: Aminotra 86.0 4.1 8.9E-05 41.3 9.2 57 132-192 128-184 (371)
457 TIGR01977 am_tr_V_EF2568 cyste 86.0 1.9 4E-05 43.8 6.7 56 132-191 126-181 (376)
458 PRK06460 hypothetical protein; 85.7 2 4.2E-05 43.9 6.6 69 117-189 104-172 (376)
459 PRK10874 cysteine sulfinate de 85.6 2 4.4E-05 44.1 6.8 55 132-190 149-203 (401)
460 TIGR03392 FeS_syn_CsdA cystein 84.5 2.4 5.1E-05 43.5 6.7 55 132-190 146-200 (398)
461 TIGR01979 sufS cysteine desulf 84.3 2.3 5E-05 43.6 6.5 55 132-190 148-202 (403)
462 PRK06541 hypothetical protein; 84.0 16 0.00035 38.4 12.6 56 134-189 208-268 (460)
463 PRK08248 O-acetylhomoserine am 83.8 2.2 4.8E-05 44.3 6.1 67 119-189 125-191 (431)
464 PRK05769 4-aminobutyrate amino 83.7 11 0.00025 39.2 11.3 174 16-195 52-271 (441)
465 PRK09295 bifunctional cysteine 83.5 2.2 4.7E-05 44.0 5.9 55 132-190 153-207 (406)
466 PRK09264 diaminobutyrate--2-ox 83.4 6.5 0.00014 40.8 9.4 168 16-187 37-242 (425)
467 TIGR03402 FeS_nifS cysteine de 83.4 8.1 0.00017 39.2 10.0 55 132-190 125-179 (379)
468 TIGR03403 nifS_epsilon cystein 82.9 2.6 5.7E-05 42.9 6.2 165 20-190 2-183 (382)
469 PRK13580 serine hydroxymethylt 82.9 2.2 4.8E-05 44.7 5.5 157 31-192 62-263 (493)
470 PLN02651 cysteine desulfurase 81.7 3 6.4E-05 42.2 6.0 55 132-190 127-181 (364)
471 PRK08064 cystathionine beta-ly 81.2 3 6.6E-05 42.7 5.9 68 119-190 114-181 (390)
472 COG0399 WecE Predicted pyridox 80.9 4.9 0.00011 40.6 7.0 53 132-191 111-163 (374)
473 PRK08247 cystathionine gamma-s 80.7 3.7 8E-05 41.7 6.3 70 119-192 112-181 (366)
474 PLN02409 serine--glyoxylate am 80.0 16 0.00034 37.6 10.7 59 132-190 122-182 (401)
475 PRK06767 methionine gamma-lyas 79.1 4 8.7E-05 41.8 6.0 61 128-192 131-191 (386)
476 TIGR02539 SepCysS Sep-tRNA:Cys 78.9 2.4 5.2E-05 43.1 4.3 46 147-192 146-191 (370)
477 cd06452 SepCysS Sep-tRNA:Cys-t 78.4 3.4 7.3E-05 41.8 5.1 60 132-191 121-183 (361)
478 TIGR01825 gly_Cac_T_rel pyrido 77.7 3.3 7.2E-05 42.1 4.9 49 147-195 163-211 (385)
479 PRK06176 cystathionine gamma-s 77.4 4.7 0.0001 41.2 5.8 69 120-192 111-179 (380)
480 TIGR00707 argD acetylornithine 77.4 29 0.00062 35.1 11.7 60 124-187 151-214 (379)
481 PRK12403 putative aminotransfe 76.7 4.2 9E-05 42.7 5.4 54 133-186 208-265 (460)
482 PRK03317 histidinol-phosphate 76.6 13 0.00028 37.6 8.9 77 195-299 88-171 (368)
483 KOG2862|consensus 76.4 45 0.00098 32.6 11.4 123 60-187 50-183 (385)
484 COG0001 HemL Glutamate-1-semia 76.0 50 0.0011 34.0 12.4 113 68-187 128-244 (432)
485 PRK02769 histidine decarboxyla 75.8 36 0.00079 34.7 11.8 58 131-189 145-205 (380)
486 PRK04013 argD acetylornithine/ 75.6 33 0.00072 34.8 11.3 59 125-187 144-206 (364)
487 PRK07046 aminotransferase; Val 75.4 38 0.00081 35.5 12.0 109 68-187 148-262 (453)
488 PRK06105 aminotransferase; Pro 75.1 43 0.00093 35.2 12.4 172 16-190 46-266 (460)
489 PRK08776 cystathionine gamma-s 74.9 6.4 0.00014 40.6 6.1 65 122-190 124-188 (405)
490 PRK08861 cystathionine gamma-s 74.2 6.7 0.00015 40.2 6.0 64 124-191 119-182 (388)
491 PRK11706 TDP-4-oxo-6-deoxy-D-g 74.1 34 0.00073 34.8 11.1 52 132-190 108-159 (375)
492 PLN02760 4-aminobutyrate:pyruv 72.3 6.4 0.00014 41.8 5.4 60 134-193 247-311 (504)
493 PRK05613 O-acetylhomoserine am 71.8 8.3 0.00018 40.1 6.1 68 120-191 131-199 (437)
494 cd00609 AAT_like Aspartate ami 71.5 47 0.001 32.7 11.4 49 144-192 129-180 (350)
495 TIGR02080 O_succ_thio_ly O-suc 69.8 9.5 0.00021 39.0 5.9 56 131-190 124-179 (382)
496 cd00613 GDC-P Glycine cleavage 69.4 57 0.0012 33.2 11.7 53 132-189 148-201 (398)
497 TIGR01324 cysta_beta_ly_B cyst 69.1 5.3 0.00011 40.7 3.9 67 122-192 114-180 (377)
498 COG0160 GabT 4-aminobutyrate a 68.7 1E+02 0.0022 32.1 13.0 121 62-187 129-266 (447)
499 TIGR00858 bioF 8-amino-7-oxono 68.6 7.5 0.00016 38.9 4.9 47 147-193 146-192 (360)
500 PRK04870 histidinol-phosphate 68.2 20 0.00044 35.9 8.0 45 197-241 83-133 (356)
No 1
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=7.4e-49 Score=388.89 Aligned_cols=345 Identities=42% Similarity=0.624 Sum_probs=310.3
Q ss_pred CCceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccch
Q psy16848 16 SNRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTL 92 (514)
Q Consensus 16 ~g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l 92 (514)
+|+.++||+|||||+ ||++.+++.+++++||.+.++++...|+.+.+.++|+++|+++|.+.+++++||..||..++
T Consensus 37 ~~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i 116 (388)
T COG0156 37 DGRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEAALLFSSGFVANLGLL 116 (388)
T ss_pred CCceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHH
Confidence 568899999999997 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccC--CCcEEEeeccccccCCccchhHHh
Q psy16848 93 FTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVK--IPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 93 ~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
.++.+ ++|.|+.|...|.|+++++++.+++++.|+|+|+++||+.|.+.... ++++|++||+|+|+|++|
T Consensus 117 ~~l~~--~~dli~~D~lnHASiidG~rls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiA------ 188 (388)
T COG0156 117 SALLK--KGDLIFSDELNHASIIDGIRLSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIA------ 188 (388)
T ss_pred HHhcC--CCcEEEEechhhhhHHHHHHhCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcC------
Confidence 99987 99999999999999999999999999999999999999999985433 578999999998887777
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQ 250 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 250 (514)
T Consensus 189 -------------------------------------------------------------------------------- 188 (388)
T COG0156 189 -------------------------------------------------------------------------------- 188 (388)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCc-cCceEEEcCCcc
Q psy16848 251 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQL-HNMDIISGTLGK 329 (514)
Q Consensus 251 ~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~-~~~di~~~S~sK 329 (514)
||++|.+++++|+.++++||+|+.|.+|+.|+++.+..+.. .+.||+++||+|
T Consensus 189 --------------------------pL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsK 242 (388)
T COG0156 189 --------------------------PLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGK 242 (388)
T ss_pred --------------------------CHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchh
Confidence 46666667777777777777777777777777777666653 456999999999
Q ss_pred cccCCCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccC
Q psy16848 330 AFGNIGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHT 409 (514)
Q Consensus 330 ~lg~~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 409 (514)
++|..||++.++..+++.+.....++.|+++.||..++++.++++.+.+ ..+.+++++++..+++..+...++.+.++
T Consensus 243 AlGs~Gg~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~--~~~~r~~L~~~~~~~~~~~~~~~~~~~~s 320 (388)
T COG0156 243 ALGSSGGYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEE--GPERRERLQELAAFFRSLLKALGLVLLPS 320 (388)
T ss_pred hhcccCceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhcCCccCCC
Confidence 9999899999999999999999999999999999999999999998753 34688999999999998777778888788
Q ss_pred CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 410 PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 410 ~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
.++++++.+.++..+.++...|+ ++||++.+..+|+.|.+...+|++++..+|++||+++++.+.++
T Consensus 321 ~s~I~pv~~gd~~~a~~~s~~l~-~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 321 ESPIIPVILGDEERALEASRALL-EEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCeeeeEeCCHHHHHHHHHHHH-HCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 89999999998878889999997 66999999999999999999999999999999999999998864
No 2
>KOG1360|consensus
Probab=100.00 E-value=1e-47 Score=362.88 Aligned_cols=368 Identities=57% Similarity=0.945 Sum_probs=342.2
Q ss_pred ceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhh
Q psy16848 18 RVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFT 94 (514)
Q Consensus 18 ~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~ 94 (514)
..+.=++|+||++ ||+|.+|+.+.++++|.+.++++...|....+.++|+.+|++.+++.+++|+|+..||.+.|.+
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLft 250 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFT 250 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHH
Confidence 3455568999996 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhh
Q psy16848 95 LGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSH 174 (514)
Q Consensus 95 l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (514)
|.++-||=+|+.+...|.|++.+++..+.+-..|+|+|+++|+++|++.+...||+|.|+.+|+|+|.+||+.++|.+++
T Consensus 251 Lak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah 330 (570)
T KOG1360|consen 251 LAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAH 330 (570)
T ss_pred HHHHCCCcEEeccccchHHHHHHhhhcCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHH
Confidence 99888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhh
Q psy16848 175 QHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLEN 254 (514)
Q Consensus 175 ~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~ 254 (514)
++|+..++|+.|++|+||++|.||.+
T Consensus 331 ~yGAiTFlDEVHAVGlYG~rGaGvge------------------------------------------------------ 356 (570)
T KOG1360|consen 331 KYGAITFLDEVHAVGLYGPRGAGVGE------------------------------------------------------ 356 (570)
T ss_pred HhCceeeeehhhhhccccCCCCCccc------------------------------------------------------
Confidence 99999999999999999999988532
Q ss_pred ccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCC
Q psy16848 255 MDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI 334 (514)
Q Consensus 255 ~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~ 334 (514)
.+++....||+.++++|+||+-
T Consensus 357 ----------------------------------------------------------rdGvm~kvDiIsGTLgKafGcV 378 (570)
T KOG1360|consen 357 ----------------------------------------------------------RDGVMHKVDIISGTLGKAFGCV 378 (570)
T ss_pred ----------------------------------------------------------cCCcchhhhhcccchhhhcccc
Confidence 1223346899999999999999
Q ss_pred CeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCCcEE
Q psy16848 335 GGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPSHII 414 (514)
Q Consensus 335 GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 414 (514)
|||+.....+++.++.+..+|+|+++.||..++.++.+.+++..++....++..+....++++.|.+.|+++++.+++++
T Consensus 379 GGYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~~pSHIi 458 (570)
T KOG1360|consen 379 GGYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIPNPSHII 458 (570)
T ss_pred cceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccCCCccee
Confidence 99999999999999999999999999999999999999999887777778888899999999999999999999999999
Q ss_pred EEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCccCCcch-hhH
Q psy16848 415 PIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLDLPLSGLTC-AQV 493 (514)
Q Consensus 415 ~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~~~~~~~~~-~~~ 493 (514)
++.+++...+.++++.|+.++|||+....+|+.+.+...+|+.++..+|++-++.+++.+.+++.+++++....+. ..|
T Consensus 459 Pv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~l~~~~~~s~~~c 538 (570)
T KOG1360|consen 459 PVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVGLPRVRDWSSAGC 538 (570)
T ss_pred eeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcCCcccCCcccccc
Confidence 9999988888899999999999999999999999999999999999999999999999999999999987755555 578
Q ss_pred hHHH
Q psy16848 494 NILL 497 (514)
Q Consensus 494 ~~~~ 497 (514)
++++
T Consensus 539 ~fc~ 542 (570)
T KOG1360|consen 539 NFCV 542 (570)
T ss_pred cccc
Confidence 8874
No 3
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=5.9e-43 Score=354.40 Aligned_cols=345 Identities=29% Similarity=0.434 Sum_probs=304.1
Q ss_pred CceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchh
Q psy16848 17 NRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLF 93 (514)
Q Consensus 17 g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~ 93 (514)
++.++||+|++||+ ||++++++.+++++||.+.++++...|+...++++|+++++++|.+.+++++||..||+.++.
T Consensus 101 ~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~ 180 (476)
T PLN02955 101 FKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANMAAMV 180 (476)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHH
Confidence 46899999999997 999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hccc------------cCCCceEEecCccchhhhhhhhcC----CCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccc
Q psy16848 94 TLGK------------MIPGLHYISDAGNHASMIQGIRNS----SAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVH 157 (514)
Q Consensus 94 ~l~~------------~~~gd~v~~~~~~h~~~~~~~~~~----~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~ 157 (514)
++.. .+++|.|++|...|.|++.++++. +++++.|+|+|+++|+++|++... +
T Consensus 181 aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HND~~~Le~~L~~~~~-~---------- 249 (476)
T PLN02955 181 AIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLLSSCKM-K---------- 249 (476)
T ss_pred HHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCCCHHHHHHHHHhCCC-C----------
Confidence 8731 247889999999999999999987 578889999999999998876432 1
Q ss_pred cccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCE
Q psy16848 158 SMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPK 237 (514)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~ 237 (514)
T Consensus 250 -------------------------------------------------------------------------------- 249 (476)
T PLN02955 250 -------------------------------------------------------------------------------- 249 (476)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCc
Q psy16848 238 IIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQL 317 (514)
Q Consensus 238 ~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~ 317 (514)
.++|+++.+.++.|.+.|+++|.++|++||++||+||+|++|.+|+.|.+..+.+++.
T Consensus 250 ----------------------~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~ 307 (476)
T PLN02955 250 ----------------------RKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE 307 (476)
T ss_pred ----------------------ceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCC
Confidence 2456666667777888889999999999999999999999999999998888877766
Q ss_pred cCceEEEcCCcccccCCCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy16848 318 HNMDIISGTLGKAFGNIGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRN 397 (514)
Q Consensus 318 ~~~di~~~S~sK~lg~~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 397 (514)
.+.|++++||+|++|..||++++++++++.++.....+.|++..++..++++.++++.+..+ +..+++++++.+++++
T Consensus 308 ~di~ii~~TLsKA~G~~GGfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~ 385 (476)
T PLN02955 308 ADVDLCVGTLSKAAGCHGGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKA 385 (476)
T ss_pred CCCcEEEEeCccchhccCceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHH
Confidence 78899999999999998999999999999999888888899888889999999999877543 2477888888888887
Q ss_pred HHHhCCCccccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 398 ELIQIGFPVEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 398 ~L~~~g~~~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
. .|+++ .++++.+.+++.....++.++|+ ++||++.+..+|..|.+...+|++++..+|++|+++++++|.++
T Consensus 386 ~---~G~~~---~sPI~pI~ig~~~~a~~~~~~L~-~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~ 458 (476)
T PLN02955 386 L---SGVDI---SSPIISLVVGNQEKALKASRYLL-KSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSC 458 (476)
T ss_pred h---cCCCC---CCCEEEEEeCCHHHHHHHHHHHH-HCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHH
Confidence 4 36653 47899999988777888999996 99999999999999999999999999999999999999999998
Q ss_pred HHHcCC
Q psy16848 478 WKSLDL 483 (514)
Q Consensus 478 l~~~~~ 483 (514)
.+....
T Consensus 459 ~~~~~~ 464 (476)
T PLN02955 459 LDFDNT 464 (476)
T ss_pred Hhhhcc
Confidence 776554
No 4
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=5e-41 Score=345.75 Aligned_cols=353 Identities=54% Similarity=0.900 Sum_probs=296.4
Q ss_pred CceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchh
Q psy16848 17 NRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLF 93 (514)
Q Consensus 17 g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~ 93 (514)
|+.+++|+|++|++ ||++++++.+++++++.+.++++..+|+.+.+.++++++++++|.+++++++||++||..++.
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai~ 123 (402)
T TIGR01821 44 AKDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVANDATLA 123 (402)
T ss_pred CeeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHHH
Confidence 47899999999997 899999999999999988887888888888999999999999999999999999999999998
Q ss_pred hccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhh
Q psy16848 94 TLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVS 173 (514)
Q Consensus 94 ~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (514)
.+....+++.|+.+..+|.++..+++..+.++..++++|.+++++.+...
T Consensus 124 ~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~------------------------------ 173 (402)
T TIGR01821 124 TLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRHNDVAHLEKLLQSV------------------------------ 173 (402)
T ss_pred HhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECCCCHHHHHHHHHhc------------------------------
Confidence 77543478999999999999999888888877777777777666655432
Q ss_pred hhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHh
Q psy16848 174 HQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLE 253 (514)
Q Consensus 174 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~ 253 (514)
T Consensus 174 -------------------------------------------------------------------------------- 173 (402)
T TIGR01821 174 -------------------------------------------------------------------------------- 173 (402)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC
Q psy16848 254 NMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN 333 (514)
Q Consensus 254 ~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~ 333 (514)
..+++++|++++++||+|.+.|+++|.++|++||+++|+||+|++|.+|+.+.++....+...++|++++||+|++|.
T Consensus 174 --~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~ 251 (402)
T TIGR01821 174 --DPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGV 251 (402)
T ss_pred --cCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhcc
Confidence 112468999999999999999999999999999999999999998887776655544344334579999999999998
Q ss_pred CCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCCcE
Q psy16848 334 IGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPSHI 413 (514)
Q Consensus 334 ~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 413 (514)
.|||+++++++++.+......+.++++.++..++++.++++.+.+. ++.+++.+++.+++.+.|+++|+++..+.+++
T Consensus 252 ~GG~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~i 329 (402)
T TIGR01821 252 VGGYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGIPVIPNPSHI 329 (402)
T ss_pred CCceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCCCCCE
Confidence 8899999999999988766666667788899999999999987543 45667778999999999999988877777888
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Q psy16848 414 IPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 414 ~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~~ 483 (514)
+.+.++......++.+.|++++||.+.+..+|..+.+..++|++++..+|++|+++++++|++++++++.
T Consensus 330 ~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~~ 399 (402)
T TIGR01821 330 VPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRLGL 399 (402)
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 8887765334678888886467999998887776667789999999999999999999999999987654
No 5
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=2e-40 Score=341.49 Aligned_cols=353 Identities=51% Similarity=0.826 Sum_probs=295.8
Q ss_pred CceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchh
Q psy16848 17 NRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLF 93 (514)
Q Consensus 17 g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~ 93 (514)
++.+++|++++|++ ||++++++.+++++++.+.++++..++..+.+.++++++++++|.+++++++||++||+.++.
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai~ 123 (406)
T PRK13393 44 PREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEAALLFTSGYVSNWAALS 123 (406)
T ss_pred CccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHH
Confidence 46899999999997 899999999999999988777777777778899999999999999999999999999999998
Q ss_pred hccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhh
Q psy16848 94 TLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVS 173 (514)
Q Consensus 94 ~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (514)
.+....+||.|+++..+|.+++.+++..+.++..++++|++.+++.+...
T Consensus 124 ~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~------------------------------ 173 (406)
T PRK13393 124 TLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRHNDPADLERKLSDL------------------------------ 173 (406)
T ss_pred HhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHhc------------------------------
Confidence 77654478999999999999999998888887777777777776655432
Q ss_pred hhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHh
Q psy16848 174 HQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLE 253 (514)
Q Consensus 174 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~ 253 (514)
T Consensus 174 -------------------------------------------------------------------------------- 173 (406)
T PRK13393 174 -------------------------------------------------------------------------------- 173 (406)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC
Q psy16848 254 NMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN 333 (514)
Q Consensus 254 ~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~ 333 (514)
..+++++|++++++|++|.+.|+++|.++|+++|+++|+||+|+.|.+|+.|.++....+...++|++++||+|++|.
T Consensus 174 --~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~ 251 (406)
T PRK13393 174 --DPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGV 251 (406)
T ss_pred --cCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcc
Confidence 112467899999999999999999999999999999999999998888877766554444444578999999999998
Q ss_pred CCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCCcE
Q psy16848 334 IGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPSHI 413 (514)
Q Consensus 334 ~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 413 (514)
.|||+++++++++.+......+.++.+.++..++++.++++.+.... ..+++++++.+++.+.|++.++++..+.+++
T Consensus 252 ~GG~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~i 329 (406)
T PRK13393 252 MGGYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKAGIPHLPNPSHI 329 (406)
T ss_pred cCceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHcCCCcCCCCCCe
Confidence 88999999999998887766665666788888999999998774432 3356778899999999998888777777888
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Q psy16848 414 IPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 414 ~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~~ 483 (514)
+.+.+++.....++.+.|++++||.+.+..++..+.+...+|++++..+|++|+++++++|+++++++..
T Consensus 330 ~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~~~ 399 (406)
T PRK13393 330 VPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARLGL 399 (406)
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhcCc
Confidence 8887655344678888897346999998887776767789999999999999999999999999887643
No 6
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=4.2e-40 Score=339.53 Aligned_cols=353 Identities=53% Similarity=0.855 Sum_probs=294.7
Q ss_pred CceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchh
Q psy16848 17 NRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLF 93 (514)
Q Consensus 17 g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~ 93 (514)
|+.++||++++|++ ||++.+++.+++++++.+.++++..+|..+.+.++++++++++|.+.+++++||++||..++.
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~ 124 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDATLS 124 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHH
Confidence 47899999999997 899999999999999887777777777888999999999999999899999999999999888
Q ss_pred hccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhh
Q psy16848 94 TLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVS 173 (514)
Q Consensus 94 ~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (514)
.+....+++.|+.+...|.++..+++..+.++..++++|++++++.+...
T Consensus 125 ~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~~d~~~le~~l~~~------------------------------ 174 (407)
T PRK09064 125 TLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRHNDVAHLEELLAAA------------------------------ 174 (407)
T ss_pred HHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECCCCHHHHHHHHHhc------------------------------
Confidence 77544478999999999999998888888887777777777776655421
Q ss_pred hhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHh
Q psy16848 174 HQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLE 253 (514)
Q Consensus 174 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~ 253 (514)
T Consensus 175 -------------------------------------------------------------------------------- 174 (407)
T PRK09064 175 -------------------------------------------------------------------------------- 174 (407)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC
Q psy16848 254 NMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN 333 (514)
Q Consensus 254 ~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~ 333 (514)
..+++++|++++++|++|.+.|+++|.++|++||+++|+||+|++|.+|+.|.++....+...++|++++||||++|.
T Consensus 175 --~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~ 252 (407)
T PRK09064 175 --DPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGV 252 (407)
T ss_pred --cCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhc
Confidence 113468999999999999999999999999999999999999998877776655544444334679999999999998
Q ss_pred CCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCCcE
Q psy16848 334 IGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPSHI 413 (514)
Q Consensus 334 ~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 413 (514)
.|||+++++++++.+......+.++++.++..++++.++++.+... ...+++++++++++.+.|++.|+++..+.+++
T Consensus 253 ~GG~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~i 330 (407)
T PRK09064 253 MGGYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAAGIPVMPNESHI 330 (407)
T ss_pred cCceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCE
Confidence 8899999999999887766666556677888888899999887543 34578889999999999999988877777788
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Q psy16848 414 IPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 414 ~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~~ 483 (514)
+.+.+++.....++.+.|++++||.+.+..++..+.+..++|++++..+|++|+++++++|++++++++.
T Consensus 331 v~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~~ 400 (407)
T PRK09064 331 VPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARLGL 400 (407)
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 8887765445678888886456999998777665656678999999999999999999999999988754
No 7
>KOG1359|consensus
Probab=100.00 E-value=8.9e-41 Score=304.51 Aligned_cols=344 Identities=34% Similarity=0.546 Sum_probs=296.5
Q ss_pred ceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhh
Q psy16848 18 RVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFT 94 (514)
Q Consensus 18 ~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~ 94 (514)
..+++|++++|++ ||++.++-.++++.||.+..+.++.-|+...+..+|.++|++.+.+++++++|+..||..++-+
T Consensus 67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED~ilypscfdANag~fea 146 (417)
T KOG1359|consen 67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGREDTILYPSCFDANAGAFEA 146 (417)
T ss_pred cceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCceEEeccccccchHHHHH
Confidence 3589999999996 9999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhh
Q psy16848 95 LGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSH 174 (514)
Q Consensus 95 l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (514)
+.. |-|.|+.++..|.|++++++++. .|.|.|...+++.+.+...-+-++|.+||+|+||||++|+.++++|++
T Consensus 147 il~--pedAvfSDeLNhASIIdGirLck----ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei~~La~ 220 (417)
T KOG1359|consen 147 ILT--PEDAVFSDELNHASIIDGIRLCK----RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEISQLAK 220 (417)
T ss_pred hcC--hhhhhhccccccchhhhhhHHHh----hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHHHHHHH
Confidence 865 99999999999999999999997 788899999999998888778899999999999988886555555555
Q ss_pred hcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhh
Q psy16848 175 QHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLEN 254 (514)
Q Consensus 175 ~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~ 254 (514)
+||+.+++
T Consensus 221 kYgaLlfi------------------------------------------------------------------------ 228 (417)
T KOG1359|consen 221 KYGALLFI------------------------------------------------------------------------ 228 (417)
T ss_pred hcCcEEEE------------------------------------------------------------------------
Confidence 55555444
Q ss_pred ccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc-C
Q psy16848 255 MDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG-N 333 (514)
Q Consensus 255 ~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg-~ 333 (514)
||+|+.|++|..|++..+.++...++|++.++++|++| .
T Consensus 229 ----------------------------------------DecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga 268 (417)
T KOG1359|consen 229 ----------------------------------------DECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGA 268 (417)
T ss_pred ----------------------------------------eecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCC
Confidence 55554444444444444555545589999999999997 4
Q ss_pred CCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCCcE
Q psy16848 334 IGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPSHI 413 (514)
Q Consensus 334 ~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 413 (514)
.|||..+++++++.++...+++.|+.+.||.....+.++++.+.. -.+...+.+.+.+++++..+..|+.+.....++
T Consensus 269 ~GGyttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~--s~~~i~~~~a~~qrfr~~me~aGftIsg~~hPI 346 (417)
T KOG1359|consen 269 SGGYTTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMV--SSKEIQSRQANTQRFREFMEAAGFTISGASHPI 346 (417)
T ss_pred CCCCccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhcCceecCCCCCc
Confidence 679999999999999999999999999998888888888886642 234677788889999999888899887777788
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 414 IPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 414 ~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
.++.+++...+...++.|+ ++||+|...++|..|++...+|+.++..+|+||||++++++.++.+..+
T Consensus 347 ~pv~lGda~lA~~~ad~lL-k~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 347 CPVMLGDARLASKMADELL-KRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred cceecccHHHHHHHHHHHH-hcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 8888998888889999998 9999999999999999999999999999999999999999999877653
No 8
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=6.4e-40 Score=338.28 Aligned_cols=353 Identities=51% Similarity=0.853 Sum_probs=291.0
Q ss_pred CceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchh
Q psy16848 17 NRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLF 93 (514)
Q Consensus 17 g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~ 93 (514)
|+.+++|++++|++ ||++++++.+++++++.+.++++..++..+...++++++++++|.+++++++||++|+..++.
T Consensus 45 ~~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i~ 124 (410)
T PRK13392 45 PRRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSNDAALS 124 (410)
T ss_pred CceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHH
Confidence 46789999999996 899999999999999988777877888877889999999999999999999999999988888
Q ss_pred hccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhh
Q psy16848 94 TLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVS 173 (514)
Q Consensus 94 ~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (514)
.+....+||.|+++...|.++..+++..|+++..++++|.+.+++.
T Consensus 125 ~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~---------------------------------- 170 (410)
T PRK13392 125 TLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHNDLADLEEQ---------------------------------- 170 (410)
T ss_pred HHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCCCHHHHHHH----------------------------------
Confidence 7754448999999999999998888777777666655555444443
Q ss_pred hhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHh
Q psy16848 174 HQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLE 253 (514)
Q Consensus 174 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~ 253 (514)
++
T Consensus 171 ------------------------------------------------------------------------------l~ 172 (410)
T PRK13392 171 ------------------------------------------------------------------------------LA 172 (410)
T ss_pred ------------------------------------------------------------------------------HH
Confidence 33
Q ss_pred hccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC
Q psy16848 254 NMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN 333 (514)
Q Consensus 254 ~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~ 333 (514)
+...+++++|++++++||+|.+.|+++|.++|++||+++|+||+|+.|.+|..+.++....+...+.|++++||||++|.
T Consensus 173 ~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~ 252 (410)
T PRK13392 173 SVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGC 252 (410)
T ss_pred hccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhc
Confidence 33334688999999999999999999999999999999999999998877766555443333333578999999999998
Q ss_pred CCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCCcE
Q psy16848 334 IGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPSHI 413 (514)
Q Consensus 334 ~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 413 (514)
.|||+++++++++.++.....+.++.+.++..++++.++|+..... ...+++++++++++.+.|++.|+++.++.+++
T Consensus 253 ~GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 330 (410)
T PRK13392 253 LGGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTS--QTERDAHQDRVAALKAKLNANGIPVMPSPSHI 330 (410)
T ss_pred ccchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCE
Confidence 8899999999999888777666566677888889999999876432 34567788999999999999998877777888
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Q psy16848 414 IPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 414 ~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~~ 483 (514)
+.+.+++.....++++.|++++||.+.+..++..+.+..++|++++..+|++|+++++++|++++++++.
T Consensus 331 ~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~~~ 400 (410)
T PRK13392 331 VPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRLEL 400 (410)
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 7777765444678889886568999998877666666789999999999999999999999999988765
No 9
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=3.3e-39 Score=336.34 Aligned_cols=356 Identities=26% Similarity=0.382 Sum_probs=300.3
Q ss_pred cCCceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccc
Q psy16848 15 KSNRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDST 91 (514)
Q Consensus 15 ~~g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~ 91 (514)
.+|+.++||.+++|++ ||++++++.+++++||.++++++.++|+.+.+.+++++++++++.++++++++|..++..+
T Consensus 106 ~~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~sa 185 (481)
T PLN02822 106 INGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPDSILYSYGLSTIFSV 185 (481)
T ss_pred ECCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCCEEEECCHHHHHHHH
Confidence 4788999999999885 8999999999999999988888889999999999999999999998899999998889889
Q ss_pred hhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhh
Q psy16848 92 LFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCE 171 (514)
Q Consensus 92 l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (514)
+.++.+ +||.|++++..|.++..+++..+++++.++++|.++++..+.+.....
T Consensus 186 i~a~~~--~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~------------------------ 239 (481)
T PLN02822 186 IPAFCK--KGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAEN------------------------ 239 (481)
T ss_pred HHHhCC--CCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhh------------------------
Confidence 988876 999999999999999999999999999999999888887765432110
Q ss_pred hhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHH
Q psy16848 172 VSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQV 251 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~ 251 (514)
T Consensus 240 -------------------------------------------------------------------------------- 239 (481)
T PLN02822 240 -------------------------------------------------------------------------------- 239 (481)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhccCCCc-eEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCc-cCceEEEcCCcc
Q psy16848 252 LENMDVKIP-KLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQL-HNMDIISGTLGK 329 (514)
Q Consensus 252 l~~~~~~~~-~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~-~~~di~~~S~sK 329 (514)
..++++ ++|++++++|++|.+.|+++|+++|++||+++|+||+|++|.+|+.|++..+..++. .++|++++||+|
T Consensus 240 ---~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sK 316 (481)
T PLN02822 240 ---KRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGH 316 (481)
T ss_pred ---cccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchh
Confidence 001223 799999999999999999999999999999999999999998888887777666642 478999999999
Q ss_pred cccCCCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcccc
Q psy16848 330 AFGNIGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEH 408 (514)
Q Consensus 330 ~lg~~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 408 (514)
++|..|||+++++++++.++.....+.|+.+.|+..++++.++|+.+.. .++++++++++.+++.+.|++. |+++..
T Consensus 317 alg~~GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~ 394 (481)
T PLN02822 317 ALATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLED--NPSVLAKLKENIALLHKGLSDIPGLSIGS 394 (481)
T ss_pred hhhhCCeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9998899999999999998877777777777788889999899987643 2568899999999999999987 877754
Q ss_pred -CCCcEEEEEeCCC--------ccHHHHHHHHHHhCCeEEecccCCCCCC--CCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 409 -TPSHIIPIKIGNP--------ALNTKICDMLLKEKGHYVQPINYPTVPV--GEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 409 -~~~~~~~i~l~~~--------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~--~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
+.++++.+.+++. ....++++.|++++||.+.++.++.... .+..+|++++..+|++|+++++++|+++
T Consensus 395 ~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~ 474 (481)
T PLN02822 395 NTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRV 474 (481)
T ss_pred CCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4566777877542 1136789998768899999876543322 2457999999999999999999999998
Q ss_pred HHHc
Q psy16848 478 WKSL 481 (514)
Q Consensus 478 l~~~ 481 (514)
+.++
T Consensus 475 ~~~~ 478 (481)
T PLN02822 475 AASV 478 (481)
T ss_pred HHHH
Confidence 8764
No 10
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=327.54 Aligned_cols=351 Identities=25% Similarity=0.353 Sum_probs=281.4
Q ss_pred hcCCceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEecccccccc
Q psy16848 14 HKSNRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDS 90 (514)
Q Consensus 14 ~~~g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~ 90 (514)
+.+|..++||+|++||+ ||++++++.+++++++.+.+.+....+..+...++++++++++|.+++++++||++||..
T Consensus 50 ~~~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~ 129 (407)
T PRK07179 50 KTPGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFESCLLCQSGWAANVG 129 (407)
T ss_pred cCCCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCcEEEECCHHHHHHH
Confidence 34778899999999996 899999999999998766544444444456889999999999999999999999999999
Q ss_pred chhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHh
Q psy16848 91 TLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 91 ~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
++.++.. +||.|+++...|.++..+++..+.+++.+.++|+++|++.+.+.
T Consensus 130 ~l~~l~~--~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~--------------------------- 180 (407)
T PRK07179 130 LLQTIAD--PNTPVYIDFFAHMSLWEGVRAAGAQAHPFRHNDVDHLRRQIERH--------------------------- 180 (407)
T ss_pred HHHHhCC--CCCEEEEECCcCHHHHHHHHHCCCeEEEecCCCHHHHHHHHHhc---------------------------
Confidence 9999876 89999999999999998888888887777777777766655321
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQ 250 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 250 (514)
T Consensus 181 -------------------------------------------------------------------------------- 180 (407)
T PRK07179 181 -------------------------------------------------------------------------------- 180 (407)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccc
Q psy16848 251 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKA 330 (514)
Q Consensus 251 ~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~ 330 (514)
++++|++++++||+|.+.|+++|.++|+++|+++|+||+|++|..|..+.++....+....+|++++|+||+
T Consensus 181 --------~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~ 252 (407)
T PRK07179 181 --------GPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKA 252 (407)
T ss_pred --------CCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHh
Confidence 256889999999999999999999999999999999999998877776655443344333569999999999
Q ss_pred ccCCCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCC
Q psy16848 331 FGNIGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTP 410 (514)
Q Consensus 331 lg~~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 410 (514)
+|+.+|++++++++++.+........++.+.++..++++.++++.+... ++.+++++++++++.+.|+++|+.+. +.
T Consensus 253 ~g~~~G~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~--~~~~~~l~~~~~~l~~~L~~~g~~v~-~~ 329 (407)
T PRK07179 253 FAGRAGIITCPRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESA--DDRRARLHANARFLREGLSELGYNIR-SE 329 (407)
T ss_pred hhccCeEEEeCHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCC-CC
Confidence 9886799999999888776554444445555666667777778766332 45788999999999999999887765 56
Q ss_pred CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCcc
Q psy16848 411 SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLDLPL 485 (514)
Q Consensus 411 ~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~~~~ 485 (514)
++++.+.++.......+.+.|. ++||.+.....+..+.+.+.+|++++..+|++|+++++++|++++++.++.+
T Consensus 330 ~~i~~l~~~~~~~~~~~~~~L~-~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~~~~ 403 (407)
T PRK07179 330 SQIIALETGSERNTEVLRDALE-ERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEVDLWF 403 (407)
T ss_pred CCEEEEEeCCHHHHHHHHHHHH-HCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCc
Confidence 6788888765334567777884 8999865444433344568999999999999999999999999999877643
No 11
>PLN02483 serine palmitoyltransferase
Probab=100.00 E-value=1.9e-38 Score=331.20 Aligned_cols=364 Identities=28% Similarity=0.436 Sum_probs=298.1
Q ss_pred CCceeeecccCCCCC----ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccc
Q psy16848 16 SNRVTCRLSSVQYKV----PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDST 91 (514)
Q Consensus 16 ~g~~~~d~~~~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~ 91 (514)
.++.++||+|++||+ ++...+++.+++++++.+.++++..+|+.+.++++|+.+++++|.++++++++|+.++..+
T Consensus 98 ~~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~ 177 (489)
T PLN02483 98 KTRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFGMGYATNSTI 177 (489)
T ss_pred CCceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHH
Confidence 457899999999996 4678899999999999988889988999999999999999999999999999999999988
Q ss_pred hhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhccc-CCCcEEEeeccccccCCccchhHHh
Q psy16848 92 LFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDV-KIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 92 l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
+.++.. +||.|+++++.|.++..+++..|++++.++++|++++++.+++... .+|+.
T Consensus 178 i~al~~--~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t-------------------- 235 (489)
T PLN02483 178 IPALIG--KGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRT-------------------- 235 (489)
T ss_pred HHHhCC--CCCEEEEcchhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhhhhcccccc--------------------
Confidence 888866 9999999999999999999999999999999999999887764211 01100
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQ 250 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 250 (514)
T Consensus 236 -------------------------------------------------------------------------------- 235 (489)
T PLN02483 236 -------------------------------------------------------------------------------- 235 (489)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhccCCCce-EEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCc-cCceEEEcCCc
Q psy16848 251 VLENMDVKIPK-LVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQL-HNMDIISGTLG 328 (514)
Q Consensus 251 ~l~~~~~~~~~-~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~-~~~di~~~S~s 328 (514)
..+..+ +|+++++.|++|.+.++++|.++|++||+++|+||+|++|..|+.|.+..+..+.. .+.|++++|||
T Consensus 236 -----~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfS 310 (489)
T PLN02483 236 -----HRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFT 310 (489)
T ss_pred -----ccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecc
Confidence 001123 67778888999999999999999999999999999999888887776665554432 46799999999
Q ss_pred ccccCCCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhc----hHHHHHHHHHHHHHHHHHHHHhCCC
Q psy16848 329 KAFGNIGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQ----EGVELRAKHQDIVAYLRNELIQIGF 404 (514)
Q Consensus 329 K~lg~~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~ 404 (514)
|++|+.|||+++++++++.+........++.++++..++++.++++.+..+ ...+.+++++++++++.+.|+++|+
T Consensus 311 Ks~g~~GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~ 390 (489)
T PLN02483 311 KSFGSCGGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGF 390 (489)
T ss_pred hhcccCceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCC
Confidence 999988999999999999998765544445556777777777888765422 3456678899999999999999988
Q ss_pred ccccC-CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Q psy16848 405 PVEHT-PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 405 ~~~~~-~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~~ 483 (514)
.+..+ .++++++.+....+..++++.|+ ++||.+.+..++..+...+.+|++++..+|+||+++++++|+++++.+.+
T Consensus 391 ~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll-~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~~ 469 (489)
T PLN02483 391 EVLGDNDSPVMPIMLYNPAKIPAFSRECL-KQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVGI 469 (489)
T ss_pred cccCCCCCCEEEEEECCHHHHHHHHHHHH-HCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 76544 34676766655445678999997 88999998666555666689999999999999999999999999998876
Q ss_pred ccCC
Q psy16848 484 PLSG 487 (514)
Q Consensus 484 ~~~~ 487 (514)
.+..
T Consensus 470 ~~~~ 473 (489)
T PLN02483 470 KYFP 473 (489)
T ss_pred eecc
Confidence 5543
No 12
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=5.7e-38 Score=320.12 Aligned_cols=352 Identities=26% Similarity=0.386 Sum_probs=286.2
Q ss_pred eecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccc
Q psy16848 21 CRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGK 97 (514)
Q Consensus 21 ~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~ 97 (514)
+||+|++||+ ||++++++.+++++||.++++++..+|....+.++|+++++++|.+++++++||+.|+..++.++.+
T Consensus 1 ~~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~ 80 (392)
T PLN03227 1 LNFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAK 80 (392)
T ss_pred CCCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCC
Confidence 5899999997 8999999999999999999999999998889999999999999999999999999999999988866
Q ss_pred cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcC
Q psy16848 98 MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHG 177 (514)
Q Consensus 98 ~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (514)
+||+|+++++.|.+++.+++..+.++++++++|.+++++.+.......
T Consensus 81 --~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~~~l~~~~~~i~~~~------------------------------ 128 (392)
T PLN03227 81 --RGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDMKDLRRVLEQVRAQD------------------------------ 128 (392)
T ss_pred --CCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHHhhhhc------------------------------
Confidence 999999999999999999999899998899998888887665432110
Q ss_pred ceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccC
Q psy16848 178 ALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDV 257 (514)
Q Consensus 178 ~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~ 257 (514)
..++...+
T Consensus 129 ------------------------------------------------------------------------~a~~~~~~ 136 (392)
T PLN03227 129 ------------------------------------------------------------------------VALKRKPT 136 (392)
T ss_pred ------------------------------------------------------------------------cccccccC
Confidence 00001112
Q ss_pred CCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCC--ccCceEEEcCCcccccCCC
Q psy16848 258 KIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQ--LHNMDIISGTLGKAFGNIG 335 (514)
Q Consensus 258 ~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~--~~~~di~~~S~sK~lg~~G 335 (514)
+++++|++++++|++|.+.|+++|.++|++||+++|+||+|++|..|+.|.+..+.+++ ..++|+++.|++|++|+.|
T Consensus 137 ~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g 216 (392)
T PLN03227 137 DQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG 216 (392)
T ss_pred CCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC
Confidence 45789999999999999999999999999999999999999988888877777666654 2356999999999999888
Q ss_pred eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccc--------
Q psy16848 336 GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVE-------- 407 (514)
Q Consensus 336 G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-------- 407 (514)
|++++++++++.++.......|+.+.++..++++.+++....+ .++++++++++.+++.+.|++.+++.+
T Consensus 217 g~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~ 294 (392)
T PLN03227 217 GMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLV 294 (392)
T ss_pred cEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccccccccccc
Confidence 9999999988887765555556666678788888777765432 245888999999999999987544321
Q ss_pred ---cCCCcEEEEEeCCCcc---------HHHHHHHHHHhCCeEEeccc------CCCCCCCCcEEEEEeCCCCCHHHHHH
Q psy16848 408 ---HTPSHIIPIKIGNPAL---------NTKICDMLLKEKGHYVQPIN------YPTVPVGEEKIRLAPTPFHTREMIDK 469 (514)
Q Consensus 408 ---~~~~~~~~i~l~~~~~---------~~~~~~~Ll~~~GI~v~~~~------~~~~~~~~~~iRl~~~~~~t~e~id~ 469 (514)
.+.++++.+.+.+... ..++++.++ ++|+.+.+.. .+..| +..+|++++..+|+||+++
T Consensus 295 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gi~~~~~~~~~~~~~~~~P--~~~iR~~~~~~~t~eei~~ 371 (392)
T PLN03227 295 ITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSL-SEGVAVVSTGGHVKKFLQLVP--PPCLRVVANASHTREDIDK 371 (392)
T ss_pred cCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHH-HCCCEEEecccccCCcCCCCC--CceEEEEecCCCCHHHHHH
Confidence 2346688888865321 247888886 8999986421 12333 4689999999999999999
Q ss_pred HHHHHHHHHHHc
Q psy16848 470 FVTDLLAVWKSL 481 (514)
Q Consensus 470 ~~~~l~~~l~~~ 481 (514)
++++|+++++++
T Consensus 372 ~~~~l~~~~~~~ 383 (392)
T PLN03227 372 LLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHHH
Confidence 999999998775
No 13
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=1.8e-37 Score=318.77 Aligned_cols=352 Identities=32% Similarity=0.528 Sum_probs=284.6
Q ss_pred CCceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccch
Q psy16848 16 SNRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTL 92 (514)
Q Consensus 16 ~g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l 92 (514)
+|+.++||++++|++ +|++++++.+++++++.++++++...|..+.+.++++.+++++|.+++++++||++|+..++
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~ 115 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGTEDTILYASCFDANGGLF 115 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHH
Confidence 788899999999986 78999999999999887777778777888889999999999999999999999999988888
Q ss_pred hhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhh
Q psy16848 93 FTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEV 172 (514)
Q Consensus 93 ~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (514)
.++.+ +||+|++++++|.++..+++..+.+.+.+.+.|++++++.+.+...
T Consensus 116 ~~l~~--~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~--------------------------- 166 (393)
T TIGR01822 116 ETLLG--AEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEARA--------------------------- 166 (393)
T ss_pred HHhCC--CCCEEEEeccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhh---------------------------
Confidence 88865 9999999999999999988888887777777777777666643211
Q ss_pred hhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHH
Q psy16848 173 SHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVL 252 (514)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l 252 (514)
T Consensus 167 -------------------------------------------------------------------------------- 166 (393)
T TIGR01822 167 -------------------------------------------------------------------------------- 166 (393)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc
Q psy16848 253 ENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG 332 (514)
Q Consensus 253 ~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg 332 (514)
...++++|++++++|++|.+.|+++|.++|++||+++|+||+|++|..+..+.+..+..+...++|++++|+||+++
T Consensus 167 ---~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~ 243 (393)
T TIGR01822 167 ---AGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALG 243 (393)
T ss_pred ---cCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhh
Confidence 01247889999999999999999999999999999999999998887766554433333333468999999999996
Q ss_pred C-CCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCC
Q psy16848 333 N-IGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPS 411 (514)
Q Consensus 333 ~-~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 411 (514)
+ .|||+++++++++.+......+.++.+.++..++++.++++.+. ..++.+++++++.+++.+.|++.|+.+..+.+
T Consensus 244 g~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 321 (393)
T TIGR01822 244 GASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLE--ASNELRDRLWANTRYFRERMEAAGFDIKPADH 321 (393)
T ss_pred CCCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 4 45999999999998876544454555556666777788887653 34568889999999999999988877665566
Q ss_pred cEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 412 HIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 412 ~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
+++.+.+++.....++++.|+ ++||.+....++..+.+...+|++++..+|++|+++++++|++++++++
T Consensus 322 ~~~~i~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~~ 391 (393)
T TIGR01822 322 PIIPVMLYDAVLAQRFARRLL-EEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGRELG 391 (393)
T ss_pred CEEEEEeCCHHHHHHHHHHHH-HCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence 777777665455778999996 7899998544443344556799999999999999999999999987654
No 14
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=4.1e-35 Score=300.46 Aligned_cols=353 Identities=35% Similarity=0.554 Sum_probs=275.7
Q ss_pred hhcCCceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccc
Q psy16848 13 VHKSNRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAND 89 (514)
Q Consensus 13 ~~~~g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~ 89 (514)
+..+|+.++||.++++++ +|.+.+++.+++.+++...+.+....|..++.+++++++++++|.+..++++||+++++
T Consensus 28 ~~~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~ 107 (385)
T TIGR01825 28 VRVNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEAALVFQSGFNTNQ 107 (385)
T ss_pred EEECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHH
Confidence 336888999998877664 78999999999988766555566677888999999999999999888899999999999
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.++.++.. +||.|++++++|.+...+++..+.++..+++.|.+++++.
T Consensus 108 ~a~~~~~~--~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~------------------------------ 155 (385)
T TIGR01825 108 GVLSALLR--KGDIVLSDELNHASIIDGLRLTKATKKIYKHADMDDLDRV------------------------------ 155 (385)
T ss_pred HHHHHhCC--CCCEEEEEccccHHHHHHHHhcCCceEEeCCCCHHHHHHH------------------------------
Confidence 88888765 9999999999999998777777776665555555544443
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHH
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLT 249 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 249 (514)
T Consensus 156 -------------------------------------------------------------------------------- 155 (385)
T TIGR01825 156 -------------------------------------------------------------------------------- 155 (385)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcc
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGK 329 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK 329 (514)
+.+...++++++++++++|++|.+.++++|.++|++||+++|+||+|+.+.++..+.+.....+...+.|++++||||
T Consensus 156 --l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 233 (385)
T TIGR01825 156 --LRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSK 233 (385)
T ss_pred --HHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccH
Confidence 333333457899999999999999999999999999999999999998776554332222222333468899999999
Q ss_pred cccCCCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccC
Q psy16848 330 AFGNIGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHT 409 (514)
Q Consensus 330 ~lg~~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 409 (514)
+++..|||+++++++++.+......+.++...++..++++.++++.+.+. .+..++++++++++.+.|++.|+++..+
T Consensus 234 ~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 311 (385)
T TIGR01825 234 AIGVVGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRS--PELMERLWDNTRFFKAGLGKLGYDTGGS 311 (385)
T ss_pred HhhcCCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 99887899999999998887654434334445677778888888765332 2467778889999999999988887767
Q ss_pred CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 410 PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 410 ~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
.++++.+.++...+..++++.|+ ++||.+.+..++..+.+...+|++++..++++++++++++|++++++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~L~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 383 (385)
T TIGR01825 312 ETPITPVVIGDEKAAQEFSRRLF-DEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKELG 383 (385)
T ss_pred CCCEEEEEECCHHHHHHHHHHHH-HCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHhC
Confidence 67777776654334678999997 7799986555544444567999999989999999999999999987653
No 15
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=7.4e-35 Score=295.80 Aligned_cols=346 Identities=36% Similarity=0.536 Sum_probs=270.7
Q ss_pred hhcCCceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccc
Q psy16848 13 VHKSNRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAND 89 (514)
Q Consensus 13 ~~~~g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~ 89 (514)
+..+|+.++||.++++++ +|++++++.+++++++...+.+....|..+...++++.++++++.+..+++++|++++.
T Consensus 11 ~~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~ 90 (360)
T TIGR00858 11 VVRDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEAALLFSSGYLANV 90 (360)
T ss_pred EEECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCCEEEECchHHHHH
Confidence 346899999999888876 48999999999998776555555566777889999999999999888999999999988
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.++.++.. +||+|++++++|.+...+++..|.+++.++..|.+.+++
T Consensus 91 ~~l~~~~~--~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~------------------------------- 137 (360)
T TIGR00858 91 GVISALVG--KGDLILSDALNHASLIDGCRLSGARVRRYRHNDVEHLER------------------------------- 137 (360)
T ss_pred HHHHHhCC--CCCEEEEEccccHHHHHHHHhcCCceEEecCCCHHHHHH-------------------------------
Confidence 77777755 999999999999999887777777666555444444444
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHH
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLT 249 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 249 (514)
T Consensus 138 -------------------------------------------------------------------------------- 137 (360)
T TIGR00858 138 -------------------------------------------------------------------------------- 137 (360)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCC-ccCceEEEcCCc
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQ-LHNMDIISGTLG 328 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~-~~~~di~~~S~s 328 (514)
.+++...++++++++++++|++|...++++|.++|+++|+++|+||+|+.+.++..+.+.....+. ..+.|++++|+|
T Consensus 138 -~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 216 (360)
T TIGR00858 138 -LLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLS 216 (360)
T ss_pred -HHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEech
Confidence 443322234678999999999999999999999999999999999999977655433333222222 236789999999
Q ss_pred ccccCCCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCcccc
Q psy16848 329 KAFGNIGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEH 408 (514)
Q Consensus 329 K~lg~~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 408 (514)
|++++.|||+++++++++.+......+.++.+.++..++++.++++.... .++.+++++++++++.+.|+++++.+..
T Consensus 217 K~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 294 (360)
T TIGR00858 217 KALGSYGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQE--EPWRREKLLALIARLRAGLEALGFTLMP 294 (360)
T ss_pred hhhhccCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHcCCccCC
Confidence 99998889999999998888655444433445566767777888876532 2567899999999999999998877666
Q ss_pred CCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q psy16848 409 TPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLL 475 (514)
Q Consensus 409 ~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~ 475 (514)
+.++++++.++...+..++.+.|+ ++||.+.++..+..+.+.+++|++++..++++|+++++++|+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 295 SCTPIVPVIIGDNASALALAEELQ-QQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHH-HCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 677788888875445678999995 899999886654434455789999998899999999998874
No 16
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=1.4e-34 Score=297.89 Aligned_cols=352 Identities=34% Similarity=0.548 Sum_probs=274.3
Q ss_pred CCceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccch
Q psy16848 16 SNRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTL 92 (514)
Q Consensus 16 ~g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l 92 (514)
+|+.++|+.+++|++ +|++.+++.+++++++..++.++...|..++.+++++++++++|.+..+++++|++++..++
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~ 119 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTEDAILYSSCFDANGGLF 119 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHH
Confidence 778899998887764 68899999999988766555556667888999999999999999888899999999999888
Q ss_pred hhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhh
Q psy16848 93 FTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEV 172 (514)
Q Consensus 93 ~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (514)
.++.+ |||.|++++++|.+...+++..+++++.++..|++++++.+.+...
T Consensus 120 ~~l~~--~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~--------------------------- 170 (397)
T PRK06939 120 ETLLG--KEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEAKE--------------------------- 170 (397)
T ss_pred HHhCC--CCCEEEEEhhhhHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhc---------------------------
Confidence 88865 9999999999999999888888888777666666666655533211
Q ss_pred hhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHH
Q psy16848 173 SHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVL 252 (514)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l 252 (514)
T Consensus 171 -------------------------------------------------------------------------------- 170 (397)
T PRK06939 171 -------------------------------------------------------------------------------- 170 (397)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccc-
Q psy16848 253 ENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAF- 331 (514)
Q Consensus 253 ~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l- 331 (514)
...+++++++++++|++|...++++|.++|++||+++|+||+|+++..+..+.+..+..+...++|++++|+||++
T Consensus 171 ---~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 247 (397)
T PRK06939 171 ---AGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG 247 (397)
T ss_pred ---cCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC
Confidence 0124678888889999999999999999999999999999999866654433222222333336789999999999
Q ss_pred cCCCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCC
Q psy16848 332 GNIGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPS 411 (514)
Q Consensus 332 g~~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 411 (514)
|+.|||+++++++++.+......+.++.+.++..++++.++++.+.. ..+++++++++++++.+.|++.+++...+.+
T Consensus 248 g~r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 325 (397)
T PRK06939 248 GASGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEE--SDELRDRLWENARYFREGMTAAGFTLGPGEH 325 (397)
T ss_pred ccCceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCcCCCCC
Confidence 44569999999999988765444433444556666777777876632 3468889999999999999998877665666
Q ss_pred cEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 412 HIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 412 ~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
+++.+.++...+..++++.|+ ++||.+.+..++..+.+..++|++++..++++++++++++|+++++++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~~ 395 (397)
T PRK06939 326 PIIPVMLGDAKLAQEFADRLL-EEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKELG 395 (397)
T ss_pred CEEEEEECCHHHHHHHHHHHH-HCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence 777666655445678999996 7799998655533333457899999988999999999999999988753
No 17
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=100.00 E-value=1.1e-34 Score=293.49 Aligned_cols=343 Identities=48% Similarity=0.750 Sum_probs=268.7
Q ss_pred eeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhc
Q psy16848 19 VTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTL 95 (514)
Q Consensus 19 ~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l 95 (514)
.+++|+|++||| ||++.+++.+++++++.+.+++++..|..+..+++++.++++++.+..++++||++++..++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~~ 81 (349)
T cd06454 2 KVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLSTL 81 (349)
T ss_pred CceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHHh
Confidence 478999999997 78999999999999877666666666778999999999999999988999999999998888877
Q ss_pred cccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhh
Q psy16848 96 GKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQ 175 (514)
Q Consensus 96 ~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (514)
.. +||.|++++++|.+...+++..|++++.++..|.+++++.+.+..
T Consensus 82 ~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~------------------------------- 128 (349)
T cd06454 82 AG--KGDLIISDSLNHASIIDGIRLSGAKKRIFKHNDMEDLEKLLREAR------------------------------- 128 (349)
T ss_pred cC--CCCEEEEehhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHHhh-------------------------------
Confidence 65 999999999999999888877777777666555555555543321
Q ss_pred cCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhc
Q psy16848 176 HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENM 255 (514)
Q Consensus 176 ~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~ 255 (514)
T Consensus 129 -------------------------------------------------------------------------------- 128 (349)
T cd06454 129 -------------------------------------------------------------------------------- 128 (349)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC
Q psy16848 256 DVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG 335 (514)
Q Consensus 256 ~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G 335 (514)
..++++++++++++||+|...|+++|.++|+++|+++|+|++|++|..+..+...........++|++++|+||++++.|
T Consensus 129 ~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g 208 (349)
T cd06454 129 RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG 208 (349)
T ss_pred ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC
Confidence 01236789999999999999999999999999999999999998776543332221111113468999999999999888
Q ss_pred eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCCc-EE
Q psy16848 336 GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPSH-II 414 (514)
Q Consensus 336 G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~ 414 (514)
|+++.++++.+.+......+.++.+.++..++++.++++.... .++.+++++++++++.+.|.+.+++...+.++ ++
T Consensus 209 G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~ 286 (349)
T cd06454 209 GYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGGSPSHIIP 286 (349)
T ss_pred CEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEE
Confidence 9999999988887765544434446778888888888887643 45678899999999999999888776555444 34
Q ss_pred EEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 415 PIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 415 ~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
.+.+++..+..++.+.|+ ++||.+.++.++....+.+++|++++..++++++++++++|+++
T Consensus 287 ~~~~~~~~~~~~~~~~L~-~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 287 PLIGDDPAKAVAFSDALL-ERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEeCCChHHHHHHHHHHH-hCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 444443445678999996 78999987654332333579999999889999999999999864
No 18
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=2.5e-34 Score=294.74 Aligned_cols=347 Identities=36% Similarity=0.545 Sum_probs=270.4
Q ss_pred hhcCCceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccc
Q psy16848 13 VHKSNRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAND 89 (514)
Q Consensus 13 ~~~~g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~ 89 (514)
+..+|+.++|+.++++++ +|++++++.+++.+++.+.+.+....+..+..++++++++++++.+..+++++|++++.
T Consensus 34 ~~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~g~~~~~ 113 (385)
T PRK05958 34 LVVDGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAERALLFSSGYAANL 113 (385)
T ss_pred eEeCCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHH
Confidence 334789999999887654 58999999999998876555555666777889999999999999888899999999988
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.++..+.+ +||.|++++++|.+...+++..|.+++.++..|.+.+++.+.
T Consensus 114 ~~l~~~~~--~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~---------------------------- 163 (385)
T PRK05958 114 AVLTALAG--KGDLIVSDKLNHASLIDGARLSRARVRRYPHNDVDALEALLA---------------------------- 163 (385)
T ss_pred HHHHHhCC--CCCEEEEeCccCHHHHHHHHhcCCceEEeCCCCHHHHHHHHH----------------------------
Confidence 77777755 999999999999999888777777766655555555544442
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHH
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLT 249 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 249 (514)
T Consensus 164 -------------------------------------------------------------------------------- 163 (385)
T PRK05958 164 -------------------------------------------------------------------------------- 163 (385)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCc-cCceEEEcCCc
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQL-HNMDIISGTLG 328 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~-~~~di~~~S~s 328 (514)
.. .++++++++++++|++|...++++|.++|++||+++|+||+|+.|.++..+.+........ ...++++.|+|
T Consensus 164 ----~~-~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~s 238 (385)
T PRK05958 164 ----KW-RAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLG 238 (385)
T ss_pred ----hc-cCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEech
Confidence 21 1125678888999999999999999999999999999999998776654333222211221 24568899999
Q ss_pred ccccCCCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCcccc
Q psy16848 329 KAFGNIGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEH 408 (514)
Q Consensus 329 K~lg~~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 408 (514)
|++++.||++++++++.+.+......+.++.+.++..++++.++++.+... .+.++++.++++++.+.|++.++++..
T Consensus 239 K~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~ 316 (385)
T PRK05958 239 KALGSSGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRALGFQLMD 316 (385)
T ss_pred hhcccCCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCC
Confidence 999987899999998888776544344444456777778888888876433 467889999999999999998887777
Q ss_pred CCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 409 TPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 409 ~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
+.++++++.+++..+..++.+.|. ++||.+.++..+..+.+.+++|++++..++++++++++++|+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 317 SQSAIQPLIVGDNERALALAAALQ-EQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHH-HCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 778888888875445678999995 88999987654333334579999999889999999999999875
No 19
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=100.00 E-value=8.6e-34 Score=288.41 Aligned_cols=342 Identities=22% Similarity=0.331 Sum_probs=264.8
Q ss_pred ceeeecccCCCCC---ChhHHHHHHHHHHHh-------CCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccc
Q psy16848 18 RVTCRLSSVQYKV---PKGGRKCLGEALEKF-------GTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVA 87 (514)
Q Consensus 18 ~~~~d~~~~~~~~---~~~~~~a~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a 87 (514)
..++||+|++||+ +|.+.+++.+++.++ +.+.++++...|..+.++++|+.+++++|.+.+++++||+.|
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG~~a 83 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSGYMA 83 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECChHHH
Confidence 4689999999997 799999999999998 466778888889999999999999999999999999999999
Q ss_pred cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchh
Q psy16848 88 NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK 167 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (514)
+..++..+.+ +||.|+++..+|.+++.+++......+.|+++|+++|++.+......
T Consensus 84 ~~~~~~~~~~--~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~--------------------- 140 (370)
T PRK05937 84 NLGLCAHLSS--VTDYVLWDEQVHISVVYSLSVISGWHQSFRHNDLDHLESLLESCRQR--------------------- 140 (370)
T ss_pred HHHHHHHhCC--CCCEEEEEhhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHhhhcc---------------------
Confidence 8766655544 89999999999999999988776666778888888887777542110
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH 247 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~ 247 (514)
T Consensus 141 -------------------------------------------------------------------------------- 140 (370)
T PRK05937 141 -------------------------------------------------------------------------------- 140 (370)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCC
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTL 327 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~ 327 (514)
.++++++++++++|++|.+.|+++|.++|+++|+++++|++|+.|.++..+.++....+. .+.++++.||
T Consensus 141 ---------~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~-~~~~~~~~tl 210 (370)
T PRK05937 141 ---------SFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGY-ENFYAVLVTY 210 (370)
T ss_pred ---------CCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCC-CCCcEEEEec
Confidence 123567888999999999999999999999999999999999988877666444322221 1234566799
Q ss_pred cccccCCCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccc
Q psy16848 328 GKAFGNIGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVE 407 (514)
Q Consensus 328 sK~lg~~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 407 (514)
||.+|+.|+.++..++..+.+......+.++.+.++..++++.++++.+.+.. +..+++++++.+++.+.|...+
T Consensus 211 sK~~g~~G~~vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~---- 285 (370)
T PRK05937 211 SKALGSMGAALLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAA---- 285 (370)
T ss_pred hhhhhcCceEEEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCC----
Confidence 99999878556666666666554444555666778888888888898875443 4567778888888877765421
Q ss_pred cCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCcc
Q psy16848 408 HTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLDLPL 485 (514)
Q Consensus 408 ~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~~~~ 485 (514)
.+....+.++.. ...++.+.| .++||.+....++ ..+++|++++..+|++|++++++.|+++++++++..
T Consensus 286 --~~~~~~i~~~~~-~~~~~~~~L-~~~gi~v~~~~~~----~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~~~ 355 (370)
T PRK05937 286 --PGCVQPIFLPGI-SEQELYSKL-VETGIRVGVVCFP----TGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQKNV 355 (370)
T ss_pred --CCCEEEEEeCCh-hHHHHHHHH-HHCCeeEEeeCCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCCc
Confidence 122334555542 356777788 5899998754332 245899999999999999999999999999887543
No 20
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-34 Score=277.51 Aligned_cols=326 Identities=25% Similarity=0.295 Sum_probs=252.6
Q ss_pred ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC-CCcEEEEeccccccccchhhccccCCCceEEecCc
Q psy16848 31 PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ-KEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAG 109 (514)
Q Consensus 31 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~ 109 (514)
||.+++++.+|+++.-. .+..++ .+...++.+++++..+ .++++|+||||+||+.|+....+..
T Consensus 60 hP~iv~al~~Q~~kl~h---~sn~~~--~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~---------- 124 (404)
T COG4992 60 HPALVEALKEQAEKLWH---VSNLFY--NEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYT---------- 124 (404)
T ss_pred CHHHHHHHHHHHHHhhh---cccccC--ChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHc----------
Confidence 89999999999998533 222332 4778999999999996 8999999999999999996554311
Q ss_pred cchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccc
Q psy16848 110 NHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVG 189 (514)
Q Consensus 110 ~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (514)
. ...++++|.|++.|| ++..|
T Consensus 125 --------------------------------~-~~~k~~Iia~~nsFH--------------------------GRT~g 145 (404)
T COG4992 125 --------------------------------G-DPEKSKIIAFENSFH--------------------------GRTLG 145 (404)
T ss_pred --------------------------------C-CCCCcEEEEEcCCcC--------------------------Cccce
Confidence 0 234677888888886 11111
Q ss_pred ccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCC
Q psy16848 190 LYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVH 269 (514)
Q Consensus 190 ~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~ 269 (514)
....++.. -|...+...-..+..+|++|.+.+++.+.+ +|++|+++++|
T Consensus 146 alS~t~~~---------------------------ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~----~taAvivEPIQ 194 (404)
T COG4992 146 ALSATGQP---------------------------KYRKGFGPLLPGFRHVPFNDIEALEAAIDE----DTAAVIVEPIQ 194 (404)
T ss_pred eeeccCCh---------------------------hhccCCCCCCCCceecCCCCHHHHHHHhcc----CeEEEEEeccc
Confidence 11111100 122223222335788899999999999976 69999999999
Q ss_pred CCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCceEEEcCCcccccCCC---eEEEec
Q psy16848 270 SMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYIVGT 341 (514)
Q Consensus 270 nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~ 341 (514)
...|.+++ +++++++|++||+++|.||+|+ +|+.|+.. ..+++++ .|||+ ++.|++|+ | |+++++
T Consensus 195 GEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~f--A~e~~gV--~PDI~--tlaK~LgG-G~PigA~la~ 267 (404)
T COG4992 195 GEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLF--AYEHYGV--EPDIL--TLAKALGG-GFPIGAMLAT 267 (404)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHH--HHHHhCC--CCCEE--EeeccccC-CccceeeEEc
Confidence 99999988 8999999999999999999999 77776543 2345555 89999 99999997 6 777777
Q ss_pred HHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--CCcc---ccCCCcEEEE
Q psy16848 342 KNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI--GFPV---EHTPSHIIPI 416 (514)
Q Consensus 342 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~---~~~~~~~~~i 416 (514)
+.+.+.+....++. +++.||+.++++.++++.+.++. +.++.+++.+++.+.|+++ .+++ +...|.|+.+
T Consensus 268 ~~~~~~~~~G~HgS--TfGGNpLacAv~~a~l~~l~~e~---ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGi 342 (404)
T COG4992 268 EEIASAFTPGDHGS--TFGGNPLACAVALAVLEVLLEEG---LLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGI 342 (404)
T ss_pred hhhhhcCCCCcccC--CCCcCHHHHHHHHHHHHHHcchh---HHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEE
Confidence 76677777666665 55899999999999999987666 7888999999999999987 4332 3456778889
Q ss_pred EeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 417 KIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 417 ~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
++.......++++.+. ++|+.+.+ .+++.+|+.+++.+++|++++++++++++++..
T Consensus 343 el~~~~~a~~~~~~~~-~~gvL~~~-------a~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~ 399 (404)
T COG4992 343 ELKEPYRARDIVRALR-EEGVLVLP-------AGPNVIRFLPPLVITEEEIDEALDALERALAAA 399 (404)
T ss_pred EecCcccHHHHHHHHH-HCCeEEec-------CCCCeEEecCCccCCHHHHHHHHHHHHHHHHHh
Confidence 9877556789999995 99999863 345699999999999999999999999998865
No 21
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-32 Score=276.38 Aligned_cols=345 Identities=21% Similarity=0.226 Sum_probs=266.0
Q ss_pred ceeeecccC--CCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----Cc-EEEEecccccccc
Q psy16848 18 RVTCRLSSV--QYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EA-GLVFTSCYVANDS 90 (514)
Q Consensus 18 ~~~~d~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~-~i~~~sGt~a~~~ 90 (514)
...||++-. ++-.++.+.+++.+++...+. .+....|..++.+.+.+.+.+.+|. +. .++++++++|+..
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~---~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~ 104 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGT---HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFL 104 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccC---CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHH
Confidence 468888543 444577899999999987432 2225567888888888888888762 23 4555556678888
Q ss_pred chhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHh
Q psy16848 91 TLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 91 ~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
++.++.. |||+|+++.|.|.+....++.+|++++.++..
T Consensus 105 ~~~a~~~--pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~--------------------------------------- 143 (393)
T COG0436 105 AFLALLN--PGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLD--------------------------------------- 143 (393)
T ss_pred HHHHhcC--CCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCC---------------------------------------
Confidence 8888876 99999999999988776666555554433210
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-CChhHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-NDVNHLT 249 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~ 249 (514)
.. +++....
T Consensus 144 ----------------------------------------------------------------------~~~~~f~~d~ 153 (393)
T COG0436 144 ----------------------------------------------------------------------EEENGFKPDL 153 (393)
T ss_pred ----------------------------------------------------------------------cCccCCcCCH
Confidence 01 3566667
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCceEEEc
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMDIISG 325 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~di~~~ 325 (514)
+.+++..+++||++++++||||||.+++ +++|.++|++||+++|.||+|. +.+.+....++.+..+ ..+..+++.
T Consensus 154 ~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~-~~~~~i~i~ 232 (393)
T COG0436 154 EDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAG-ARDRTITIN 232 (393)
T ss_pred HHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCC-CcceEEEEe
Confidence 7777777788999999999999999999 8999999999999999999999 4443433334443333 136789999
Q ss_pred CCcccccCCC---eEEEec-HHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHH
Q psy16848 326 TLGKAFGNIG---GYIVGT-KNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSS-QEGVELRAKHQDIVAYLRNELI 400 (514)
Q Consensus 326 S~sK~lg~~G---G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~ 400 (514)
||||.++.+| ||++++ +++++.+.+..... +.+.+.+.+.++.++|+.... ...+..++.++++++.+.+.|.
T Consensus 233 s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~--~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~ 310 (393)
T COG0436 233 SFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYL--TSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALN 310 (393)
T ss_pred cccccccccccceeEeecChHHHHHHHHHHHHhc--ccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999989 999999 88888888666555 447889999999999986532 4567777899999999999999
Q ss_pred hC-CCcccc-CCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 401 QI-GFPVEH-TPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 401 ~~-g~~~~~-~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
+. |+.+.. +.|. +++..++...+..+|+.+|+++.||.+.||..+..+.+.+++|+++. .+.++++++++++.+.
T Consensus 311 ~~~g~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~--~~~~~l~~a~~rl~~~ 388 (393)
T COG0436 311 EIGGLSVVKPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLA--TSEETLEEALRRLARF 388 (393)
T ss_pred hcCCeeeccCCCeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEe--cCHHHHHHHHHHHHHH
Confidence 88 588776 5555 45566665567899999999899999999998665557899999998 4569999999999998
Q ss_pred HHHc
Q psy16848 478 WKSL 481 (514)
Q Consensus 478 l~~~ 481 (514)
++..
T Consensus 389 ~~~~ 392 (393)
T COG0436 389 LAEY 392 (393)
T ss_pred HHhc
Confidence 8754
No 22
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=4.2e-31 Score=271.80 Aligned_cols=344 Identities=26% Similarity=0.340 Sum_probs=245.2
Q ss_pred cCCceeeecccCCCCC---ChhHHHHHHHHHHHhC-CCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEecccccccc
Q psy16848 15 KSNRVTCRLSSVQYKV---PKGGRKCLGEALEKFG-TGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDS 90 (514)
Q Consensus 15 ~~g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~ 90 (514)
.+|+.++||.+++|++ ||++++++.+++++++ ..++++... ...+..++++++++++++. +.++++||++|+..
T Consensus 43 ~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~-~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ 120 (402)
T PRK07505 43 ADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTR-VRSQILKDLEEALSELFGA-SVLTFTSCSAAHLG 120 (402)
T ss_pred cCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchh-hhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHH
Confidence 3788899999999997 8999999999999887 233333222 2357889999999999988 88989999999988
Q ss_pred chhhccc---c-CCCceEEecCccchhhhh--hhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCcc
Q psy16848 91 TLFTLGK---M-IPGLHYISDAGNHASMIQ--GIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAIC 164 (514)
Q Consensus 91 ~l~~l~~---~-~~gd~v~~~~~~h~~~~~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (514)
++..+.. . ++++.|+.+...|.++.. .+...
T Consensus 121 ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~------------------------------------------- 157 (402)
T PRK07505 121 ILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICAD------------------------------------------- 157 (402)
T ss_pred HHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhc-------------------------------------------
Confidence 8865431 1 244577777788876531 11111
Q ss_pred chhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCC
Q psy16848 165 PLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHND 244 (514)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d 244 (514)
+.+++.++.+|
T Consensus 158 ---------------------------------------------------------------------~~~v~~~~~~d 168 (402)
T PRK07505 158 ---------------------------------------------------------------------ETEVETIDHND 168 (402)
T ss_pred ---------------------------------------------------------------------CCeEEEeCCCC
Confidence 22345555556
Q ss_pred hhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCcc-ccCCC-ccCceE
Q psy16848 245 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIG-ERDGQ-LHNMDI 322 (514)
Q Consensus 245 ~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~-~~~~~-~~~~di 322 (514)
++.+++.+.+ +++++++.+|+||+|.+.++++|.++|++||+++|+||+|+++.+|+.+.++. +..+. ..+.++
T Consensus 169 ~~~l~~~~~~----~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i 244 (402)
T PRK07505 169 LDALEDICKT----NKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTI 244 (402)
T ss_pred HHHHHHHHhc----CCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeE
Confidence 6666665532 35677778889999999999999999999999999999997655555543321 22332 235578
Q ss_pred EEcCCcccccCCCeEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy16848 323 ISGTLGKAFGNIGGYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQ 401 (514)
Q Consensus 323 ~~~S~sK~lg~~GG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 401 (514)
+++|++|.+++.||+++. ++++++.+......++++.+.++..++++.++++...++.+.+..++++++...+.+.+..
T Consensus 245 ~~~s~sK~~~~~Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 324 (402)
T PRK07505 245 IAASLGKAFGASGGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPT 324 (402)
T ss_pred EEEechhhhhccCeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh
Confidence 889999999987788764 7788888887776776666677888999999998665566555566665555544333211
Q ss_pred CCCccccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 402 IGFPVEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 402 ~g~~~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
. .......+..+.+++.....++.+.|+ ++||.+.+..++..+.+.+++|++++..+|++|+++++++|++++++
T Consensus 325 ~---~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 325 E---QSGSFLPIRLIYIGDEDTAIKAAKQLL-DRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred c---CCCCCCCEEEEEeCCHHHHHHHHHHHH-HCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 1 111122233344443234678899996 89999998766544445579999999999999999999999998764
No 23
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.98 E-value=6.1e-30 Score=262.22 Aligned_cols=337 Identities=19% Similarity=0.180 Sum_probs=245.9
Q ss_pred CCceeeeccc---CCCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEecccccccc
Q psy16848 16 SNRVTCRLSS---VQYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDS 90 (514)
Q Consensus 16 ~g~~~~d~~~---~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~ 90 (514)
+|++++||.+ +.++| ||+|.+++.+++++.... + .. ...+...+++++++++++.++++|++||++|++.
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~-~-~~---~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~ 107 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHI-G-NG---YTNEPVLRLAKKLVDATFADKVFFCNSGAEANEA 107 (397)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccc-c-Cc---cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHH
Confidence 7889999976 67786 799999999999973211 1 11 1246788999999999988899999999999999
Q ss_pred chhhccc-------cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCc
Q psy16848 91 TLFTLGK-------MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAI 163 (514)
Q Consensus 91 ~l~~l~~-------~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 163 (514)
+++.+.. .++.+.|..+..+|.++..+++..+.....
T Consensus 108 Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~------------------------------------ 151 (397)
T TIGR03246 108 ALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYS------------------------------------ 151 (397)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccc------------------------------------
Confidence 9986532 124455666666666665544443321100
Q ss_pred cchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCC
Q psy16848 164 CPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHN 243 (514)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~ 243 (514)
..+......+..++++
T Consensus 152 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 167 (397)
T TIGR03246 152 ----------------------------------------------------------------QGFAPLPGGIKHAPYN 167 (397)
T ss_pred ----------------------------------------------------------------cCCCCCCCceEEeCCC
Confidence 0000011234567788
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCc-cccCCCcc
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGI-GERDGQLH 318 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~-~~~~~~~~ 318 (514)
|++.+++.+. +++++|++++++++.|...+ +++|+++|++||+++|+||+|+ |+ |+.|..+ ...+++
T Consensus 168 d~~~l~~~l~----~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~-Gr~G~~~a~~~~gv-- 239 (397)
T TIGR03246 168 DLAAAKALIS----DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQT-GV-GRTGELYAYMHYGV-- 239 (397)
T ss_pred CHHHHHHHhc----cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-cC-CccccchhhhhcCC--
Confidence 8888888774 45899999999999897754 8999999999999999999996 33 3333322 223444
Q ss_pred CceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy16848 319 NMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYL 395 (514)
Q Consensus 319 ~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 395 (514)
.+|++ +++|.+++ | |++++++++.+.+....... +++.+++.++++.++|+.+.++ ++.++++++.+++
T Consensus 240 ~pDi~--t~~K~lgg-G~pigav~~~~~i~~~~~~~~~~~--t~~~~p~~~aaa~a~l~~~~~~---~l~~~~~~~~~~l 311 (397)
T TIGR03246 240 TPDIL--TSAKALGG-GFPIGAMLTTTEIAAHLKVGTHGT--TYGGNPLACAVAGKVLDLVNTP---ELLAGVKQRHDLF 311 (397)
T ss_pred CCCEE--EeehhhhC-CcceeEEEEcHHHHHhccCCCcCC--CCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHH
Confidence 78998 89999985 6 88888999988886543333 4467889999999999987543 4788899999999
Q ss_pred HHHHHhCC--Ccc---ccCCCcEEEEEeCCC--ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHH
Q psy16848 396 RNELIQIG--FPV---EHTPSHIIPIKIGNP--ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMID 468 (514)
Q Consensus 396 ~~~L~~~g--~~~---~~~~~~~~~i~l~~~--~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id 468 (514)
.+.|++++ +.+ +...+.++.+.+.+. .....++..|+ ++|+.+.+. +.+.+|++++..+|++|++
T Consensus 312 ~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~~lR~~p~~~~t~~~i~ 383 (397)
T TIGR03246 312 VDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAA-EEGVIALIA-------GPNVVRFAPSLVISDDDID 383 (397)
T ss_pred HHHHHHHHhcCCCeEeeecCceEEEEEEcCchhhHHHHHHHHHH-HCCeEEeec-------CCCEEEEeCCCCCCHHHHH
Confidence 99998863 222 234566777776542 34678888896 899998642 2468999999999999999
Q ss_pred HHHHHHHHHHHHc
Q psy16848 469 KFVTDLLAVWKSL 481 (514)
Q Consensus 469 ~~~~~l~~~l~~~ 481 (514)
+++++|+++++++
T Consensus 384 ~~~~~l~~~l~~~ 396 (397)
T TIGR03246 384 EGLARFERAIEQV 396 (397)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988753
No 24
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.98 E-value=2.4e-30 Score=259.24 Aligned_cols=344 Identities=19% Similarity=0.197 Sum_probs=235.6
Q ss_pred ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC---CCcEEEEeccccccccchhhccc-cCCCceEEe
Q psy16848 31 PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ---KEAGLVFTSCYVANDSTLFTLGK-MIPGLHYIS 106 (514)
Q Consensus 31 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~i~~~sGt~a~~~~l~~l~~-~~~gd~v~~ 106 (514)
||.|++++.+|++++...... ..+ .+...++.+++.+.+. .++++|.+|||+||++|++.... +++...|..
T Consensus 74 hP~Vv~Av~~q~~~~~h~~~~--~~~--~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf 149 (447)
T COG0160 74 HPRVVEAVKRQLAKLNHTHTR--DLY--YEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAF 149 (447)
T ss_pred CHHHHHHHHHHHHHhhcccCC--ccc--chhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEE
Confidence 899999999999986533222 222 2777888899998874 46689999999999999953322 223333444
Q ss_pred cCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccc
Q psy16848 107 DAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 186 (514)
Q Consensus 107 ~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (514)
...+|..+..++++++.....-
T Consensus 150 ~~afHG~T~galslT~~~~~~~---------------------------------------------------------- 171 (447)
T COG0160 150 DGAFHGRTLGALSLTGSKPPYK---------------------------------------------------------- 171 (447)
T ss_pred CCcccccchhhHHhccCccccc----------------------------------------------------------
Confidence 4444444443333333221100
Q ss_pred cccccccCCCceeeecCchhhHHHHHhhccCC--ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhc--cCCCceE
Q psy16848 187 AVGLYGEHGAGIGERDGQLHNMDIISGTLVNP--EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENM--DVKIPKL 262 (514)
Q Consensus 187 ~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~--~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~--~~~~~~~ 262 (514)
.| +..+..+ .++.|.+|...+...+ ........+.+++.+.+. ...++++
T Consensus 172 ---------~~--------------~~~~~~~v~~~Pyp~~yr~p~~~~~---~~~~~~~~~~~e~~i~~~~~~~~~vAa 225 (447)
T COG0160 172 ---------AG--------------FGPLPPGVYHVPYPNPYRCPFGIGG---EECGDDALEYIERALFDLEVGPEEVAA 225 (447)
T ss_pred ---------cC--------------CCCCCCCeEEecCCccccCcccCch---hhhhHHHHHHHHHHHHhhcCCCCceeE
Confidence 00 0001110 1122222211110000 000011234455544443 2356899
Q ss_pred EEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCceEEEcCCcccccCCC--
Q psy16848 263 VAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG-- 335 (514)
Q Consensus 263 vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G-- 335 (514)
++++++++..|.+.+ +++++++|++||+++|+||+|+ +|+.|+.+ ..+.+++ .+||+ +++|.+|. |
T Consensus 226 iI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~f--a~E~~gv--~PDiv--t~aK~ig~-G~P 298 (447)
T COG0160 226 IIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMF--AFEHFGV--EPDIV--TLAKSLGG-GLP 298 (447)
T ss_pred EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccch--hhhhcCC--CCCEE--EecccccC-CCc
Confidence 999999999999988 8999999999999999999999 77777432 3456666 89999 99999988 6
Q ss_pred -eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--CCccc---cC
Q psy16848 336 -GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI--GFPVE---HT 409 (514)
Q Consensus 336 -G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~---~~ 409 (514)
|.++.++++.+ .......+ ++..|++.++++.++|+.+.++. +.++..++.+++++.|.++ .++.+ ..
T Consensus 299 l~avv~r~ei~~-~~~g~~~~--Tf~GNpva~Aaa~AvL~vie~e~---L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG 372 (447)
T COG0160 299 LSAVVGRAEIMD-WPPGGHGG--TFGGNPVACAAALAVLDVIEEEN---LLERAAELGEYLRDRLEELQEKHPLIGDVRG 372 (447)
T ss_pred eeEEeccHHhcc-cCCcccCC--CCCcCHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHHHHHHHHHhhcCceecccc
Confidence 88999999888 54444444 56899999999999999886665 8899999999999999887 44443 34
Q ss_pred CCcEEEEEeCC--------CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 410 PSHIIPIKIGN--------PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 410 ~~~~~~i~l~~--------~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
.|.|+.+++.. ......+++.++ ++|+.+... ....+.+||.+++..+++++|+++++|++++++.
T Consensus 373 ~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~-~~Glil~~~-----G~~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 373 LGLMIGVELVKDRDTKEPDAELAAKIVARAF-ERGLLLLTC-----GPHGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred cceEEEEEEecCCCCCCCCHHHHHHHHHHHH-HcCCEEecc-----CCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 56788877642 134678889996 999987632 2236899999999999999999999999998764
No 25
>KOG1357|consensus
Probab=99.98 E-value=1e-30 Score=252.19 Aligned_cols=355 Identities=29% Similarity=0.426 Sum_probs=299.8
Q ss_pred eeeecccCCCCC----ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhh
Q psy16848 19 VTCRLSSVQYKV----PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFT 94 (514)
Q Consensus 19 ~~~d~~~~~~~~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~ 94 (514)
.+++++|-+|++ +-.-.+++.+.+++|+.+.++++...|+.+.+.++|+..|+++|.++++++.-|..+|.+.+.+
T Consensus 137 ~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~ 216 (519)
T KOG1357|consen 137 RCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPS 216 (519)
T ss_pred eeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCCcceEEEeccccccccCcce
Confidence 467888899996 3456677888899999988889888899999999999999999999999999999999999999
Q ss_pred ccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcc-cCCCcEEEeeccccccCCccchhHHhhhh
Q psy16848 95 LGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMD-VKIPKLVAFETVHSMTGAICPLKELCEVS 173 (514)
Q Consensus 95 l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (514)
+.. ||..|+.++..|.|++.++++.|+.+..|+|+|+++||++|++.- .++|+-
T Consensus 217 l~~--~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~T----------------------- 271 (519)
T KOG1357|consen 217 LLG--KGSLIISDELNHASLITGARLSGATTRVFRHNDMQGLERLLRDAIVYGQPKT----------------------- 271 (519)
T ss_pred eec--CCcceeeccccchheeccccccCceEEEEecCCHHHHHHHHHHHHhcCCCCc-----------------------
Confidence 976 999999999999999999999999999999999999999998643 222221
Q ss_pred hhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHh
Q psy16848 174 HQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLE 253 (514)
Q Consensus 174 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~ 253 (514)
T Consensus 272 -------------------------------------------------------------------------------- 271 (519)
T KOG1357|consen 272 -------------------------------------------------------------------------------- 271 (519)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCC-ccCceEEEcCCccccc
Q psy16848 254 NMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQ-LHNMDIISGTLGKAFG 332 (514)
Q Consensus 254 ~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~-~~~~di~~~S~sK~lg 332 (514)
+...+..+++++...++-|.+..++++.++++++..+++.||+|+.|..|+.|+++.++++. ..+.||.+++|.|.+|
T Consensus 272 -hrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfg 350 (519)
T KOG1357|consen 272 -HRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFG 350 (519)
T ss_pred -CCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcc
Confidence 00011246778888889999999999999999999999999999999999999999888876 4678999999999999
Q ss_pred CCCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhh----chHHHHHHHHHHHHHHHHHHHHhCCCcccc
Q psy16848 333 NIGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSS----QEGVELRAKHQDIVAYLRNELIQIGFPVEH 408 (514)
Q Consensus 333 ~~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 408 (514)
..||++.+++++++.++.......+.+.+|++.+.....+++.+.. ...++..+++.++..+++..|++.|+.+.+
T Consensus 351 a~GGyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG 430 (519)
T KOG1357|consen 351 AAGGYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYG 430 (519)
T ss_pred cccceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEec
Confidence 9899999999999999887777777888899988888888887753 335778888999999999999999988775
Q ss_pred C-CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 409 T-PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 409 ~-~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
. .++++++.+-.......+.+.|+ +++|.+....+|..+.-....|++.+..+|.|+++++++.+.++=+.
T Consensus 431 ~~dSpVvplll~~~~k~~~f~r~~l-~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~ 502 (519)
T KOG1357|consen 431 NNDSPVVPLLLYGPAKIVAFSREML-ERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGDE 502 (519)
T ss_pred CCCCCcceeeecCcccccHHHHHHH-hcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhchh
Confidence 5 45555554433344567888886 88988888888777767788999999999999999999998876533
No 26
>PLN00175 aminotransferase family protein; Provisional
Probab=99.97 E-value=4.8e-29 Score=256.79 Aligned_cols=341 Identities=18% Similarity=0.166 Sum_probs=244.0
Q ss_pred ceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----CcEEEEecc-cccccc
Q psy16848 18 RVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EAGLVFTSC-YVANDS 90 (514)
Q Consensus 18 ~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~i~~~sG-t~a~~~ 90 (514)
...+|+..+. +-.++.+.+++.+.+.. + ...+....|..++.+.+.+.+.+..|. +..+++|+| ++|+..
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~-~--~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~ 130 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRD-G--KNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAA 130 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhc-C--CCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHH
Confidence 4578885433 22366788888888775 2 122233345667777777777666553 223555554 667777
Q ss_pred chhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHh
Q psy16848 91 TLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 91 ~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
++.++.. |||.|+++++.|......++..|++++.++..
T Consensus 131 ~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--------------------------------------- 169 (413)
T PLN00175 131 TILGLIN--PGDEVILFAPFYDSYEATLSMAGAKIKTVTLR--------------------------------------- 169 (413)
T ss_pred HHHHhCC--CCCEEEEeCCCchhHHHHHHHcCCEEEEEECC---------------------------------------
Confidence 7777765 99999999999988877777666665544321
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQ 250 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 250 (514)
..++..+.+
T Consensus 170 -----------------------------------------------------------------------~~~~~~~~~ 178 (413)
T PLN00175 170 -----------------------------------------------------------------------PPDFAVPED 178 (413)
T ss_pred -----------------------------------------------------------------------cccCCCCHH
Confidence 011222223
Q ss_pred HHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCC
Q psy16848 251 VLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTL 327 (514)
Q Consensus 251 ~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~ 327 (514)
.+++...++++++++++|+||||.+++ +++|.++|++|++++|+||+|....++....++....+ ..+.+++++||
T Consensus 179 ~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~-~~~~vi~i~Sf 257 (413)
T PLN00175 179 ELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPG-MYERTVTMNSL 257 (413)
T ss_pred HHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCC-CcCcEEEEecc
Confidence 333333456899999999999999998 78899999999999999999995544332223333332 23678999999
Q ss_pred cccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCC
Q psy16848 328 GKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGF 404 (514)
Q Consensus 328 sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 404 (514)
||.++.+| ||+++++++++.+....... ..+.+.+.+.++.++|+.. +.++++.++.++++++.+.+.|++.|+
T Consensus 258 SK~~~~~G~RiG~~v~~~~l~~~l~~~~~~~--~~~~s~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~ 334 (413)
T PLN00175 258 GKTFSLTGWKIGWAIAPPHLTWGVRQAHSFL--TFATATPMQWAAVAALRAP-ESYYEELKRDYSAKKDILVEGLKEVGF 334 (413)
T ss_pred hhhccCcchheeeeEeCHHHHHHHHHHHhhc--cCCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 99999778 99999999999887765444 3367788888888888643 346778899999999999999999888
Q ss_pred ccccCCCc-EEEEEeCC-Cc-cHHHHHHHHHHhCCeEEecccCCCC--CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 405 PVEHTPSH-IIPIKIGN-PA-LNTKICDMLLKEKGHYVQPINYPTV--PVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 405 ~~~~~~~~-~~~i~l~~-~~-~~~~~~~~Ll~~~GI~v~~~~~~~~--~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
.+..+.++ +++++++. +. +..+++..|++++||.+.|+..+.. ..+.+++|++++ .+++++++++++|+++++
T Consensus 335 ~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~--~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 335 KVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC--KDEETLRAAVERMKTKLK 412 (413)
T ss_pred eecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc--CCHHHHHHHHHHHHHHHh
Confidence 87777665 46666632 22 4678999987678999999986543 234679999998 478999999999998875
No 27
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=2.9e-29 Score=254.19 Aligned_cols=353 Identities=21% Similarity=0.275 Sum_probs=260.8
Q ss_pred cchhhhhcC-Cc--eeeecccCCCCCChhHHHHHHHHHHHhCCCCCCc--CcccCcchHHHHHHHHHHhHcCCC--cEEE
Q psy16848 8 LNFKQVHKS-NR--VTCRLSSVQYKVPKGGRKCLGEALEKFGTGAGGT--RNISGNSLFHEKLEEDVAKLHQKE--AGLV 80 (514)
Q Consensus 8 ~~~~~~~~~-g~--~~~d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~--~~i~ 80 (514)
.+|+..... +. .|.|.+.... .+..+.+++.+.++.+..+.+.. .......+.+++.++.+++++|.+ +.|+
T Consensus 10 ~~fp~l~~~~~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIv 88 (405)
T COG0520 10 ADFPALKREVGKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIV 88 (405)
T ss_pred hhCHHHhhccCCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Confidence 344444433 23 3444443333 46789999999998766554422 222233568899999999999966 3455
Q ss_pred Ee-ccccccccchhhccc-cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccc
Q psy16848 81 FT-SCYVANDSTLFTLGK-MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHS 158 (514)
Q Consensus 81 ~~-sGt~a~~~~l~~l~~-~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~ 158 (514)
++ +.|+++..+..++.. ..+||+|++++.+|++....+
T Consensus 89 ft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw---------------------------------------- 128 (405)
T COG0520 89 FTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPW---------------------------------------- 128 (405)
T ss_pred EeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHH----------------------------------------
Confidence 55 556676666666642 348999999999999987322
Q ss_pred ccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEE
Q psy16848 159 MTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKI 238 (514)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~ 238 (514)
.......|++++
T Consensus 129 --------------------------------------------------------------------~~~~~~~Ga~v~ 140 (405)
T COG0520 129 --------------------------------------------------------------------QELAKRTGAKVR 140 (405)
T ss_pred --------------------------------------------------------------------HHHHHhcCcEEE
Confidence 222234466666
Q ss_pred EecC-CChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCc
Q psy16848 239 IYRH-NDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQL 317 (514)
Q Consensus 239 ~v~~-~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~ 317 (514)
.++. ++.....+.+++..+++|+++.+++++|.+|.+.|+++|.++|+++|+++++|.+|+.+.. +.+...
T Consensus 141 ~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~--------~idv~~ 212 (405)
T COG0520 141 VIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHL--------PIDVQE 212 (405)
T ss_pred EEecCCCCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCcc--------CCCchh
Confidence 6663 3445555666667788999999999999999999999999999999999999999997765 333335
Q ss_pred cCceEEEcCCcccc-cCCC-eEEEecHHHHHHHHhhcCceE-------------------ec-cCCcHHHHHHHHHHHHH
Q psy16848 318 HNMDIISGTLGKAF-GNIG-GYIVGTKNFIDTIRSYAAGFI-------------------FT-TSLPPTVLAGAREAIRI 375 (514)
Q Consensus 318 ~~~di~~~S~sK~l-g~~G-G~l~~~~~~~~~l~~~~~~~~-------------------~~-~~~~~~~~~a~~~~l~~ 375 (514)
.++|++++|.|||+ |+.| |++++++++++.+.+...+.. +. .+.+......+.+++++
T Consensus 213 l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~ 292 (405)
T COG0520 213 LGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDY 292 (405)
T ss_pred cCCCEEEEcccccccCCCceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHH
Confidence 58999999999955 6668 999999999998855432210 11 12344555666788888
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccC----CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCC-
Q psy16848 376 LSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHT----PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPV- 449 (514)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~----~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~- 449 (514)
+.+.+++++.++.+++.+++.+.|++. ++.+..+ ..+++.+.++. ....+++..| .++||.++.++.|..+.
T Consensus 293 ~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~-~~~~dv~~~L-~~~gI~vr~g~~ca~p~~ 370 (405)
T COG0520 293 LLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKG-IHPHDVATLL-DEKGIAVRAGHHCAQPLH 370 (405)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCC-CCHHHHHHHH-HhCCeEEEeccccccHHH
Confidence 877788899999999999999999998 6776654 46688888775 3578999999 58999999998876542
Q ss_pred ----CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 450 ----GEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 450 ----~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
-...+|+|++.++|+||||++++.|+++.+
T Consensus 371 ~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 371 RLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred HhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 134599999999999999999999998754
No 28
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=3.7e-29 Score=257.32 Aligned_cols=337 Identities=20% Similarity=0.240 Sum_probs=247.4
Q ss_pred cCCceeeeccc---CCCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC---CcEEEEecccc
Q psy16848 15 KSNRVTCRLSS---VQYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK---EAGLVFTSCYV 86 (514)
Q Consensus 15 ~~g~~~~d~~~---~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~---~~~i~~~sGt~ 86 (514)
.+|+.++||.+ +.+++ ||++.+++.+++++++.... . +. .+...+++++++++++. +++++++||++
T Consensus 40 ~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~--~--~~-~~~~~~la~~l~~~~~~~~~~~v~~~~sgse 114 (398)
T PRK03244 40 VDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSN--L--FA-TEPQIALAERLVELLGAPEGGRVFFCNSGAE 114 (398)
T ss_pred CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccC--c--cC-CHHHHHHHHHHHHhCCCCCCCEEEEeCchHH
Confidence 37888999976 55665 59999999999998664321 1 11 34557899999999874 36788899999
Q ss_pred ccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccch
Q psy16848 87 ANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPL 166 (514)
Q Consensus 87 a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (514)
|+..+++.+...++.+.|.+++.+|.....++...+......
T Consensus 115 a~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~-------------------------------------- 156 (398)
T PRK03244 115 ANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRA-------------------------------------- 156 (398)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCccccc--------------------------------------
Confidence 999999876553334666666777766665554433211100
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
.+...+.++..++.+|.+
T Consensus 157 --------------------------------------------------------------~~~~~~~~~~~~~~~d~~ 174 (398)
T PRK03244 157 --------------------------------------------------------------PFEPLPGGVEHVPYGDVD 174 (398)
T ss_pred --------------------------------------------------------------CCCCCCCCceEeCCCCHH
Confidence 000112345556666777
Q ss_pred HHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCc-cccCCCccCc
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGI-GERDGQLHNM 320 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~-~~~~~~~~~~ 320 (514)
.+++.+. +++++|++++++||+|.++| +++|.++|++||+++|+||+|+ +|.. +.++ .+..+. .+
T Consensus 175 ~l~~~~~----~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~---g~~~~~~~~~~--~p 245 (398)
T PRK03244 175 ALAAAVD----DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRT---GAWFAHQHDGV--TP 245 (398)
T ss_pred HHHHhhc----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccc---chHHhhhhhCC--CC
Confidence 7777663 46899999999999999998 8999999999999999999998 4443 3222 123333 68
Q ss_pred eEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy16848 321 DIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRN 397 (514)
Q Consensus 321 di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 397 (514)
|++ +|+|++++ | |++++++++++.+....... +.+.+++.++++.++|+.+.++. ..++++++.+++.+
T Consensus 246 Di~--t~sK~l~~-G~~ig~~~~~~~~~~~~~~~~~~~--t~~~~~~~~aaa~a~l~~~~~~~---~~~~~~~~~~~l~~ 317 (398)
T PRK03244 246 DVV--TLAKGLGG-GLPIGACLAFGPAADLLTPGLHGS--TFGGNPVACAAALAVLDTIASEG---LLENAERLGEQLRA 317 (398)
T ss_pred CEE--EEchhhhC-CcccEEEEEcHHHHhhccCCCCcC--CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHH
Confidence 887 88999985 5 88999998888776543333 44789999999999999775444 67888899999999
Q ss_pred HHHhCCCcc---ccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHH
Q psy16848 398 ELIQIGFPV---EHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDL 474 (514)
Q Consensus 398 ~L~~~g~~~---~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l 474 (514)
.|++++.+. +...+.++++.++.. ....+.+.|+ ++||.+.+. +.+.+|++++..++++|+++++++|
T Consensus 318 ~L~~~~~~~~~~v~g~g~~~~i~~~~~-~~~~~~~~l~-~~Gv~~~~~-------~~~~iR~~p~~~~t~~~i~~~~~~l 388 (398)
T PRK03244 318 GIEALGHPLVDHVRGRGLLLGIVLTAP-VAKAVEAAAR-EAGFLVNAV-------APDVIRLAPPLIITDAQVDAFVAAL 388 (398)
T ss_pred HHHhcCCCceeeEeeccEEEEEEEecc-HHHHHHHHHH-HCCeEEeec-------CCCEEEEECCCcCCHHHHHHHHHHH
Confidence 999875542 234567888888542 4677888996 899999752 2368999999989999999999999
Q ss_pred HHHHHHcC
Q psy16848 475 LAVWKSLD 482 (514)
Q Consensus 475 ~~~l~~~~ 482 (514)
++++++++
T Consensus 389 ~~~l~~~~ 396 (398)
T PRK03244 389 PAILDAAA 396 (398)
T ss_pred HHHHHhcc
Confidence 99998754
No 29
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.97 E-value=2.6e-29 Score=257.88 Aligned_cols=332 Identities=18% Similarity=0.195 Sum_probs=240.5
Q ss_pred CCceeeecccCC---CC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEecccccccc
Q psy16848 16 SNRVTCRLSSVQ---YK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDS 90 (514)
Q Consensus 16 ~g~~~~d~~~~~---~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~ 90 (514)
+|++++|+.+.- .+ .||++.+++.++++++..... .+ ..+...+++++++++.+.+++++++||++|++.
T Consensus 38 ~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~---~~--~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~ 112 (396)
T PRK04073 38 EGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSR---AF--HSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVET 112 (396)
T ss_pred CCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccccc---cc--CCHHHHHHHHHHHhcCCCCeEEEcCChHHHHHH
Confidence 566666664321 12 389999999999998654321 11 346778999999999888899999999999999
Q ss_pred chhhccc---------cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccC
Q psy16848 91 TLFTLGK---------MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTG 161 (514)
Q Consensus 91 ~l~~l~~---------~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 161 (514)
+++.+.. .++.+.|..+..+|..+..+++..+........ .|
T Consensus 113 Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~----------------~~------------- 163 (396)
T PRK04073 113 AIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGF----------------GP------------- 163 (396)
T ss_pred HHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCC----------------CC-------------
Confidence 9987632 123456667777888887666655421110000 00
Q ss_pred CccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec
Q psy16848 162 AICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR 241 (514)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~ 241 (514)
.-..+..++
T Consensus 164 -----------------------------------------------------------------------~~~~~~~~~ 172 (396)
T PRK04073 164 -----------------------------------------------------------------------MLPGIKKIP 172 (396)
T ss_pred -----------------------------------------------------------------------CCCCceEeC
Confidence 001134456
Q ss_pred CCChhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCcc-ccCC
Q psy16848 242 HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIG-ERDG 315 (514)
Q Consensus 242 ~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~-~~~~ 315 (514)
.+|.+.+++.+. ++++++++++++||+|.+.| +++|.++|++||+++|+||+|+ +|..|. .+. +..+
T Consensus 173 ~~d~~~l~~~i~----~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~---~~~~~~~~ 245 (396)
T PRK04073 173 YGDLEALKAAIT----PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGK---LFACDWDN 245 (396)
T ss_pred CCCHHHHHHhcc----cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcH---HHHhhhcC
Confidence 667777666653 46899999999999999987 8999999999999999999999 444332 111 2233
Q ss_pred CccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHH
Q psy16848 316 QLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIV 392 (514)
Q Consensus 316 ~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 392 (514)
..+|++ +++|.+|..| |++++++++.+.+....... +.+.+++.++++.++|+.+.++. +.++.++++
T Consensus 246 --~~pdi~--~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~--t~~~~~~~~aaa~aaL~~~~~~~---l~~~~~~~~ 316 (396)
T PRK04073 246 --VTPDMY--ILGKALGGGVFPISCVAANRDILGVFTPGSHGS--TFGGNPLACAVSIAALEVLEEEK---LPERSLELG 316 (396)
T ss_pred --CCCCEE--EecccccCCCCcceEEEEcHHHHhhhcCCCCCC--CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHH
Confidence 267888 7899998754 89999999998886543333 44678999999999999775444 667778889
Q ss_pred HHHHHHHHhCCC---ccccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHH
Q psy16848 393 AYLRNELIQIGF---PVEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDK 469 (514)
Q Consensus 393 ~~l~~~L~~~g~---~~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~ 469 (514)
+++.+.|++++. ....+.+.++.+.++. ...++.++|+ ++||.+.+. +.+++|++++..+|++++++
T Consensus 317 ~~l~~~L~~l~~~~i~~~~~~g~~~~~~~~~--~~~~~~~~l~-~~Gv~~~~~-------~~~~iRi~p~l~~t~e~i~~ 386 (396)
T PRK04073 317 EYFKEQLKEIDNPMIKEVRGRGLFIGVELNE--PARPYCEALK-EEGLLCKET-------HETVIRFAPPLVITKEELDW 386 (396)
T ss_pred HHHHHHHHhhcCCcccceecceEEEEEEecc--hHHHHHHHHH-HCCeEEecC-------CCCEEEEECCcccCHHHHHH
Confidence 999999988643 2234567788887764 3678889996 899998642 24689999999999999999
Q ss_pred HHHHHHHHH
Q psy16848 470 FVTDLLAVW 478 (514)
Q Consensus 470 ~~~~l~~~l 478 (514)
++++|++++
T Consensus 387 ~~~~l~~~l 395 (396)
T PRK04073 387 AFEKIKAVL 395 (396)
T ss_pred HHHHHHHHh
Confidence 999998864
No 30
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.97 E-value=5.6e-29 Score=244.55 Aligned_cols=332 Identities=22% Similarity=0.263 Sum_probs=241.2
Q ss_pred ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC-CcEEEEeccccccccchhhccccCCCceEEecCc
Q psy16848 31 PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK-EAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAG 109 (514)
Q Consensus 31 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~ 109 (514)
||.|++++.+++++ |.+++.+ .+...++.+.+.+.+.. +.+-|++|||+|++.++
T Consensus 71 ~p~V~~Av~~~l~~-G~~fg~P------te~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAi----------------- 126 (432)
T COG0001 71 HPAVVEAVQEQLER-GLSFGAP------TELEVELAELLIERVPSIEKVRFVNSGTEATMSAI----------------- 126 (432)
T ss_pred CHHHHHHHHHHHHh-cCCCCCC------CHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHH-----------------
Confidence 79999999999998 5555433 46778899999999876 89999999999999999
Q ss_pred cchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccc
Q psy16848 110 NHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVG 189 (514)
Q Consensus 110 ~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (514)
+|+|..++|+|++.|+|+||.-.|.. ++.-+-..+
T Consensus 127 -----------------------------RlARa~TgR~kIikF~G~YHG~~D~~----------------lv~agsg~~ 161 (432)
T COG0001 127 -----------------------------RLARAYTGRDKIIKFEGCYHGHSDSL----------------LVKAGSGAA 161 (432)
T ss_pred -----------------------------HHHHHhhCCCeEEEEcCCCCCCccHH----------------HhhcCcCcc
Confidence 56677889999999999997433222 111000000
Q ss_pred ccc-cCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecC
Q psy16848 190 LYG-EHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETV 268 (514)
Q Consensus 190 ~~~-~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~ 268 (514)
..| +...|+. ...-..+..+++||.+.+++.+++.. +..++|+++++
T Consensus 162 t~g~p~s~Gvp-------------------------------~~~a~~ti~~~yND~~al~~~~~~~g-~~IAaVIvEPv 209 (432)
T COG0001 162 TLGSPSSPGVP-------------------------------ADVAKHTLVLPYNDLEALEEAFEEYG-DDIAAVIVEPV 209 (432)
T ss_pred cCCCCCCCCCC-------------------------------hhhhccEEEecCCCHHHHHHHHHHcC-CcEEEEEeccc
Confidence 011 1111110 11223577888999999999999874 34899999999
Q ss_pred CCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC---eEEEec
Q psy16848 269 HSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYIVGT 341 (514)
Q Consensus 269 ~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~ 341 (514)
....|.+.| +++|+++|++||++||.||+.+..+.... +...++++ .+|+. +++|.+|+ | |++.++
T Consensus 210 ~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~g--Gaq~~~gi--~PDlt--tlGKiIGG-GlP~ga~gGr 282 (432)
T COG0001 210 AGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALG--GAQGYYGV--EPDLT--TLGKIIGG-GLPIGAFGGR 282 (432)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCc--ccccccCc--Ccchh--hhhhhhcC-CcceeeeccH
Confidence 999999988 89999999999999999999993333212 35567776 89999 99999997 6 889999
Q ss_pred HHHHHHHHhhcCceE-eccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH----hCCCccc-cCCCcEEE
Q psy16848 342 KNFIDTIRSYAAGFI-FTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELI----QIGFPVE-HTPSHIIP 415 (514)
Q Consensus 342 ~~~~~~l~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~g~~~~-~~~~~~~~ 415 (514)
.++.+.+.+....+. -+++.+++.++|+.++++.+.+.. ...+++.++.++|.+.|+ +.++++. ...+.++.
T Consensus 283 ~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~--~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~ 360 (432)
T COG0001 283 AEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEE--GVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFG 360 (432)
T ss_pred HHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEE
Confidence 999998876553321 245889999999999999886522 145555555555555554 4588764 34566777
Q ss_pred EEeCCC-------------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 416 IKIGNP-------------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 416 i~l~~~-------------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
+.+.+. .....+.+.++ ++||++.|..+. ..-+ +..+|+++|++.+++++++++++.
T Consensus 361 i~F~~~~~~n~~da~~sd~~~~~~~~~~~l-~~GV~l~ps~~e-------a~fl--S~ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 361 IFFTEEGVRNYADAKRSDVERFAKFFHHLL-NRGVYLAPSQFE-------AGFL--STAHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred EEecCCCCCCHHHHHhhchHHHHHHHHHHH-hCCcccCCcccc-------ceee--ecccCHHHHHHHHHHHHHHHHHhh
Confidence 766541 11345667786 999999876641 1223 445899999999999999988764
No 31
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.97 E-value=1.2e-28 Score=250.57 Aligned_cols=319 Identities=14% Similarity=0.123 Sum_probs=231.8
Q ss_pred hHHHHHHHHHHHhCCCCCCcCcccCc-----chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEec
Q psy16848 33 GGRKCLGEALEKFGTGAGGTRNISGN-----SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISD 107 (514)
Q Consensus 33 ~~~~a~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~ 107 (514)
.+.++..+++++|+.+++++++..|. .+...++++.+++++|.+.+++++||++++..++.++.. +||.|+++
T Consensus 19 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~--~gd~Vl~~ 96 (370)
T TIGR02539 19 VLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCK--EGDWVVLD 96 (370)
T ss_pred CCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhC--CCCEEEEC
Confidence 46677888888888877766655443 345678888899999999999999999999999988876 99999999
Q ss_pred CccchhhhhhhhcCCCCeeeccCC-------ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceE
Q psy16848 108 AGNHASMIQGIRNSSAPKIIYRHN-------DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALT 180 (514)
Q Consensus 108 ~~~h~~~~~~~~~~~~~~~~~~~~-------d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (514)
.+.|.+++.+++..|++++.++++ |++++++.+.+...
T Consensus 97 ~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~----------------------------------- 141 (370)
T TIGR02539 97 GLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVED----------------------------------- 141 (370)
T ss_pred CcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhh-----------------------------------
Confidence 999999999889899988887764 44444444322100
Q ss_pred EeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCc
Q psy16848 181 FVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIP 260 (514)
Q Consensus 181 ~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~ 260 (514)
...+++
T Consensus 142 --------------------------------------------------------------------------~~~~~~ 147 (370)
T TIGR02539 142 --------------------------------------------------------------------------ESGKPP 147 (370)
T ss_pred --------------------------------------------------------------------------ccCCCc
Confidence 001247
Q ss_pred eEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC--eEE
Q psy16848 261 KLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG--GYI 338 (514)
Q Consensus 261 ~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G--G~l 338 (514)
++|++++++||+|...|+++|.++|+++|+++|+|++|++|..+.. ....+.|++++|+||++++.| ||+
T Consensus 148 ~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~--------~~~~~~di~v~s~sK~~~~~g~~G~l 219 (370)
T TIGR02539 148 VLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVS--------AKEIGADFIVGSGHKSMAASGPCGVL 219 (370)
T ss_pred EEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCC--------HHHcCCCEEEeeCcccccCCCCEEEE
Confidence 8999999999999999999999999999999999999997643211 112357899999999998756 999
Q ss_pred EecHHHHHHHHhhcCceEecc------CCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccc---cC
Q psy16848 339 VGTKNFIDTIRSYAAGFIFTT------SLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVE---HT 409 (514)
Q Consensus 339 ~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~---~~ 409 (514)
++++++++.+.....++.++. +.....+.++.++++.. .+.+++..+.. ++.+++++.|+++|+.+. ++
T Consensus 220 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~l~~~~~~~-~~~~~l~~~L~~~g~~~~~~~~s 297 (370)
T TIGR02539 220 GMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHV-VERVKRWDEEV-KKTRWFVAELEDIGFIQLGQKPK 297 (370)
T ss_pred EECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHH-HHHHHHHHHHH-HHHHHHHHHHHhCCcEEEccCCC
Confidence 999999999887665443211 11112344445556532 22333333333 345689999999988753 45
Q ss_pred CCcEEEEEeCCC--------ccHHHHHHHHHHhCCeE-EecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 410 PSHIIPIKIGNP--------ALNTKICDMLLKEKGHY-VQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 410 ~~~~~~i~l~~~--------~~~~~~~~~Ll~~~GI~-v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
.++++.+.++.. .....+.+.|. ++||. +++ ..++++|+++. ..+++|+++++++|++++++
T Consensus 298 ~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~-e~GI~~ir~-------~~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 298 EHDLVKFETPGFHEIAQKHKRRGYFLYEELK-KRGIHGIRS-------GQTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred cCceEEEECCchhHHhhhhccccHHHHHHHH-hCCCccccC-------CcceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 667777776521 12346888885 89997 442 12458999984 57999999999999998765
Q ss_pred c
Q psy16848 481 L 481 (514)
Q Consensus 481 ~ 481 (514)
+
T Consensus 369 ~ 369 (370)
T TIGR02539 369 Y 369 (370)
T ss_pred c
Confidence 3
No 32
>PRK09082 methionine aminotransferase; Validated
Probab=99.97 E-value=1.5e-28 Score=251.65 Aligned_cols=339 Identities=16% Similarity=0.179 Sum_probs=245.3
Q ss_pred Cceeeeccc--CCCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-----cEEEEeccccccc
Q psy16848 17 NRVTCRLSS--VQYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-----AGLVFTSCYVAND 89 (514)
Q Consensus 17 g~~~~d~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~i~~~sGt~a~~ 89 (514)
+..++|+.. .++-.+|.+.+++.+.++... ..+....|..++.+++++++.++++.+ ..++++++++++.
T Consensus 29 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~ 105 (386)
T PRK09082 29 EHGAINLSQGFPDFDGPPYLVEALAYAMAAGH---NQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALF 105 (386)
T ss_pred hCCEEEecCCCCCCCCCHHHHHHHHHHHHcCC---CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHH
Confidence 345788865 333346788888888776421 222233466788888888888887752 2444455577888
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.++.++.. +||.|+++.+.|.+....++..|.+++.++... +.
T Consensus 106 ~~~~~~~~--~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~---------------------------------- 148 (386)
T PRK09082 106 AAILALVR--PGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PD---------------------------------- 148 (386)
T ss_pred HHHHHHcC--CCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-cc----------------------------------
Confidence 88888865 999999999999998888877777776654410 00
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHH
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLT 249 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 249 (514)
. ..|.+.++
T Consensus 149 --------------------------~---------------------------------------------~~d~~~l~ 157 (386)
T PRK09082 149 --------------------------F---------------------------------------------RVDWQRFA 157 (386)
T ss_pred --------------------------c---------------------------------------------cCCHHHHH
Confidence 0 01334444
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccC-CCCCCccccCCCccCceEEEc
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYG-EHGAGIGERDGQLHNMDIISG 325 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g-~~~~~~~~~~~~~~~~di~~~ 325 (514)
+.+ .++++++++++|+||||.+++ +++|.++|++|++++|+||+|.....+ ..+.++....+ ..+.+++++
T Consensus 158 ~~~----~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~-~~~~~i~~~ 232 (386)
T PRK09082 158 AAI----SPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPE-LRERAFVVS 232 (386)
T ss_pred Hhc----CccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcC-ccCcEEEEe
Confidence 443 346889999999999999987 789999999999999999999854432 22323333222 235789999
Q ss_pred CCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 326 TLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 326 S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
||||.+|.+| ||+++++++++.+....... ..+.+.+.+.++...++. ...+++++++.++++++.+.+.|++.
T Consensus 233 S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~ 309 (386)
T PRK09082 233 SFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYN--TFTVNTPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAALANS 309 (386)
T ss_pred echhhccchhhhhhhhhCCHHHHHHHHHHHhhh--cCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999998778 99999999999888765443 235677777777666653 24566778888999999999999998
Q ss_pred CCccccCCCc-EEEEEeCC--CccHHHHHHHHHHhCCeEEecccCCC-CCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 403 GFPVEHTPSH-IIPIKIGN--PALNTKICDMLLKEKGHYVQPINYPT-VPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 403 g~~~~~~~~~-~~~i~l~~--~~~~~~~~~~Ll~~~GI~v~~~~~~~-~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
++.+..+.++ ++++++++ ..+..++++.|++++||.+.|+..+. .+.+.+++|++++. +++++++.+++|++
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 310 RFKLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK--QEETLDAAAERLCQ 385 (386)
T ss_pred CCcccCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 8887766665 56677763 34678899987678899999998543 24456799999983 68889999988875
No 33
>PRK07682 hypothetical protein; Validated
Probab=99.97 E-value=3.5e-28 Score=248.41 Aligned_cols=342 Identities=15% Similarity=0.138 Sum_probs=239.8
Q ss_pred eeeecccCCC--CCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----C-cEEEEeccccccccc
Q psy16848 19 VTCRLSSVQY--KVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----E-AGLVFTSCYVANDST 91 (514)
Q Consensus 19 ~~~d~~~~~~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~-~~i~~~sGt~a~~~~ 91 (514)
..+++..+.. ...+.+.+++.+.+... ...+....|..++.+++.+++.+.+|. + +.++++++++|+..+
T Consensus 21 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 97 (378)
T PRK07682 21 GVISLGVGEPDFVTPWNVREASIRSLEQG---YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVA 97 (378)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcC---CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH
Confidence 5678864332 23456788888776531 111222345566667777777665443 2 345445557788888
Q ss_pred hhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhh
Q psy16848 92 LFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCE 171 (514)
Q Consensus 92 l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (514)
+.+++. |||.|+++.+.|......++..|.+++.++... +
T Consensus 98 ~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~------------------------------------- 137 (378)
T PRK07682 98 MRAIIN--PGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTL-E------------------------------------- 137 (378)
T ss_pred HHHhCC--CCCEEEEeCCCchhhHHHHHHcCCEEEEeecCC-c-------------------------------------
Confidence 888866 999999999999887766666666655433200 0
Q ss_pred hhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHH
Q psy16848 172 VSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQV 251 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~ 251 (514)
.+. .-|.+.+++.
T Consensus 138 ----------------------~~~---------------------------------------------~~d~~~l~~~ 150 (378)
T PRK07682 138 ----------------------NEF---------------------------------------------KVQPAQIEAA 150 (378)
T ss_pred ----------------------cCC---------------------------------------------CCCHHHHHhh
Confidence 000 0033444433
Q ss_pred HhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCc
Q psy16848 252 LENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLG 328 (514)
Q Consensus 252 l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~s 328 (514)
+ .++++++++++|+||||.+++ +++|.++|++|++++|+||+|.....+....++....+ ..+.+++++|||
T Consensus 151 ~----~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~S~S 225 (378)
T PRK07682 151 I----TAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKG-MRERTILISGFS 225 (378)
T ss_pred c----CcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhccc-ccCCEEEEecCc
Confidence 3 346889999999999999998 89999999999999999999995544332222222222 125689999999
Q ss_pred ccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCc
Q psy16848 329 KAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFP 405 (514)
Q Consensus 329 K~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 405 (514)
|.++.+| ||+++++++++.+....... ..+.+.+.+.++..+|+.. ..++++.++.++++++++.+.|++.++.
T Consensus 226 K~~~~~GlR~G~~~~~~~~i~~l~~~~~~~--~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 302 (378)
T PRK07682 226 KGFAMTGWRLGFIAAPVYFSEAMLKIHQYS--MMCAPTMAQFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEIGLT 302 (378)
T ss_pred ccccChhhhhhhhhcCHHHHHHHHHHHHhh--ccCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 9999768 99999999999887654322 2356777888888888643 2456778889999999999999999887
Q ss_pred cccCCCc-EEEEEeC-CCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 406 VEHTPSH-IIPIKIG-NPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 406 ~~~~~~~-~~~i~l~-~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+..+.++ ++++.++ ...+..++++.+++++||.+.|+..+. ..+++++|++++ .+++++++++++|+++++++
T Consensus 303 ~~~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~-~~~~~~iRis~~--~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 303 CHVPGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFG-ESGEGFIRCSYA--TSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred cCCCCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhC-cCCCCeEEEEeC--CCHHHHHHHHHHHHHHHhhc
Confidence 7667665 4445553 234578899888667899999988653 334689999998 36899999999999988764
No 34
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=3.5e-28 Score=250.19 Aligned_cols=346 Identities=15% Similarity=0.169 Sum_probs=241.7
Q ss_pred CceeeecccCCCCCChhHHHHHHHHHHHhCCCCCCcCcc--cCcchHHHHHHHHHHhHcCCC--c-EEEEeccccccccc
Q psy16848 17 NRVTCRLSSVQYKVPKGGRKCLGEALEKFGTGAGGTRNI--SGNSLFHEKLEEDVAKLHQKE--A-GLVFTSCYVANDST 91 (514)
Q Consensus 17 g~~~~d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~~~~--~-~i~~~sGt~a~~~~ 91 (514)
+..|.|-++... -++.+.+++.+.++.+......+... ....+..+++++.+++++|.+ + .++++|+|+++..+
T Consensus 16 ~~iyld~a~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~ 94 (398)
T TIGR03392 16 GTVYLDSAATAL-KPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLV 94 (398)
T ss_pred CeEEeeCccccC-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHH
Confidence 345666665553 35788999988887543222111111 112356788999999999963 3 45556667777777
Q ss_pred hhhcc--ccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 92 LFTLG--KMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 92 l~~l~--~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
+.++. ...+||.|++++++|.+.....
T Consensus 95 ~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~--------------------------------------------------- 123 (398)
T TIGR03392 95 AQSYARPRLQPGDEIIVSEAEHHANLIPW--------------------------------------------------- 123 (398)
T ss_pred HHHhhhccCCCCCEEEECCcchhHHHHHH---------------------------------------------------
Confidence 77763 1359999999999998854211
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-CChhHH
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-NDVNHL 248 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-~d~~~l 248 (514)
...+...|++++.++. .+....
T Consensus 124 ---------------------------------------------------------~~~~~~~g~~v~~v~~~~~~~~~ 146 (398)
T TIGR03392 124 ---------------------------------------------------------LMVAQQTGAKVVKLPIGADLLPD 146 (398)
T ss_pred ---------------------------------------------------------HHHHHHcCcEEEEEecCCCCCcC
Confidence 1112233444444442 122222
Q ss_pred HHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCc
Q psy16848 249 TQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLG 328 (514)
Q Consensus 249 ~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~s 328 (514)
.+.+++..+++++++++++++||||.+.|+++|.++|+++|+++++|++|+.+... + +.. ..++|++++|+|
T Consensus 147 ~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~-----~-~~~--~~~~d~~~~s~~ 218 (398)
T TIGR03392 147 IRQLPELLTPRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGP-----P-DVQ--ALDIDFYAFSGH 218 (398)
T ss_pred HHHHHHHhccCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCC-----C-Chh--hcCCCEEEEecc
Confidence 33344444557899999999999999999999999999999999999999866431 1 111 346899999999
Q ss_pred ccccCCC-eEEEecHHHHHHHHhhcCce------------------Ee-ccCCcHHHHHHHHHHHHHhhhchHHHHHHHH
Q psy16848 329 KAFGNIG-GYIVGTKNFIDTIRSYAAGF------------------IF-TTSLPPTVLAGAREAIRILSSQEGVELRAKH 388 (514)
Q Consensus 329 K~lg~~G-G~l~~~~~~~~~l~~~~~~~------------------~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 388 (514)
|.+|+.| |+++.++++++.+.....+. .+ ..+.+.....++.++++.+.+.+.+++.++.
T Consensus 219 K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~ 298 (398)
T TIGR03392 219 KLYGPTGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWS 298 (398)
T ss_pred cccCCCceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 9888878 99999998887765432110 11 1244556778888888887666777888999
Q ss_pred HHHHHHHHHHHHhC-CCcccc-CCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCC-----CCCcEEEEEeCCC
Q psy16848 389 QDIVAYLRNELIQI-GFPVEH-TPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVP-----VGEEKIRLAPTPF 461 (514)
Q Consensus 389 ~~~~~~l~~~L~~~-g~~~~~-~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~-----~~~~~iRl~~~~~ 461 (514)
.++.+++.+.|+++ ++.+.. +..+++.+.++. ....++.+.| +++||.++++..|..+ ..++++|++++.+
T Consensus 299 ~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~-~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~ 376 (398)
T TIGR03392 299 VSLADLAEERLAQLPGFRSFRCPGSSLLAFDFAG-VHHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASFAPY 376 (398)
T ss_pred HHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCC-cCHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEeecc
Confidence 99999999999887 776543 345577777654 3467888888 5899999988765421 1246999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHc
Q psy16848 462 HTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 462 ~t~e~id~~~~~l~~~l~~~ 481 (514)
+|++|++++++.|+++++++
T Consensus 377 ~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 377 NTQQDVDALVDAVGAALELL 396 (398)
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999988764
No 35
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.97 E-value=4e-28 Score=249.68 Aligned_cols=337 Identities=19% Similarity=0.170 Sum_probs=238.6
Q ss_pred cCCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccc
Q psy16848 15 KSNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAND 89 (514)
Q Consensus 15 ~~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~ 89 (514)
.+|+.++||.++ .++| ||++.+++.++++++... + .. ...+...+++++++++.+.++++|++||++|++
T Consensus 37 ~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~-~---~~-~~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e 111 (403)
T PRK05093 37 QQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHI-S---NV-FTNEPALRLAKKLIDATFAERVFFANSGAEANE 111 (403)
T ss_pred CCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcc-c---Cc-cCCHHHHHHHHHHHhhCCCCEEEEeCchHHHHH
Confidence 478889999764 7776 799999999999874321 1 11 234567899999999988889999999999999
Q ss_pred cchhhcccc-------CCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCC
Q psy16848 90 STLFTLGKM-------IPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGA 162 (514)
Q Consensus 90 ~~l~~l~~~-------~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (514)
.+++.+... ++...|.++..+|.+...+++..+..
T Consensus 112 ~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~-------------------------------------- 153 (403)
T PRK05093 112 AAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQP-------------------------------------- 153 (403)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCCh--------------------------------------
Confidence 999754221 12334444444444443332222110
Q ss_pred ccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC
Q psy16848 163 ICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH 242 (514)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~ 242 (514)
.+...+.....++..+++
T Consensus 154 --------------------------------------------------------------~~~~~~~~~~~~~~~~~~ 171 (403)
T PRK05093 154 --------------------------------------------------------------KYSDGFGPKPADITHVPF 171 (403)
T ss_pred --------------------------------------------------------------hhhhcCCCCCCCcEEeCC
Confidence 000011111234667788
Q ss_pred CChhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCcc-ccCCC
Q psy16848 243 NDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIG-ERDGQ 316 (514)
Q Consensus 243 ~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~-~~~~~ 316 (514)
+|++.+++.+. +++++|++++++++.|...+ +++|+++|++||+++|+||+|+ +++.|. ++. ...+.
T Consensus 172 ~d~~~l~~~l~----~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~---~~~~~~~~~ 244 (403)
T PRK05093 172 NDLAAVKAVID----DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGD---LFAYMHYGV 244 (403)
T ss_pred CCHHHHHHHhc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc---chhhhhcCC
Confidence 89988888774 45899999977666666544 8999999999999999999999 434332 221 12333
Q ss_pred ccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy16848 317 LHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVA 393 (514)
Q Consensus 317 ~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 393 (514)
.+|+. ||||.+++ | |++++++++.+.+....... +.+.+++.++++.++|+.+..+ +.+++++++++
T Consensus 245 --~pdi~--s~sK~l~~-G~rig~vv~~~~i~~~l~~~~~~~--t~~~~~~~~~aa~a~L~~~~~~---~~~~~~~~~~~ 314 (403)
T PRK05093 245 --TPDIL--TSAKALGG-GFPIGAMLTTAEIASHFKVGTHGS--TYGGNPLACAVAEAVFDIINTP---EVLEGVKARRQ 314 (403)
T ss_pred --CCCEE--EecccccC-CcceEEEEEcHHHHhhcCCCCCCC--CCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHH
Confidence 67876 99999985 6 99999999988886544333 4467899999999999877443 36788899999
Q ss_pred HHHHHHHhCC--Ccc---ccCCCcEEEEEeCCCc--cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHH
Q psy16848 394 YLRNELIQIG--FPV---EHTPSHIIPIKIGNPA--LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREM 466 (514)
Q Consensus 394 ~l~~~L~~~g--~~~---~~~~~~~~~i~l~~~~--~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~ 466 (514)
++.+.|++++ +.+ .+..+.++++.++... ...+++..|+ ++||.+.+. +.+++|++++..+++++
T Consensus 315 ~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~-~~Gv~v~~~-------g~~~lRl~~~~~~~~~~ 386 (403)
T PRK05093 315 RFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAA-EEGVMVLVA-------GPDVLRFAPSLVIEEAD 386 (403)
T ss_pred HHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHH-HCCeEEecC-------CCCEEEEeCCCCCCHHH
Confidence 9999998863 222 1234567778876432 4678999996 899998742 34689999998889999
Q ss_pred HHHHHHHHHHHHHHc
Q psy16848 467 IDKFVTDLLAVWKSL 481 (514)
Q Consensus 467 id~~~~~l~~~l~~~ 481 (514)
+++++++|+++++++
T Consensus 387 i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 387 IDEGLARFEKAVAKV 401 (403)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988754
No 36
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.97 E-value=3e-28 Score=249.72 Aligned_cols=334 Identities=19% Similarity=0.203 Sum_probs=233.7
Q ss_pred cCCceeeeccc---CCCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccc
Q psy16848 15 KSNRVTCRLSS---VQYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAND 89 (514)
Q Consensus 15 ~~g~~~~d~~~---~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~ 89 (514)
.+|++++||.+ +.+++ ||++.+++.+++++.... + . . ...+...+++++++++.+.+++++++||++|+.
T Consensus 28 ~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~-~-~-~--~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~ 102 (389)
T PRK01278 28 EDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHV-S-N-L--YRIPEQERLAERLVENSFADKVFFTNSGAEAVE 102 (389)
T ss_pred CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCcc-c-c-c--cCChHHHHHHHHHHhhCCCCEEEEcCCcHHHHH
Confidence 47888999966 45665 799999999999873322 1 1 1 235678899999999987788999999999999
Q ss_pred cchhhccc--cCCCc----eE-EecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCC
Q psy16848 90 STLFTLGK--MIPGL----HY-ISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGA 162 (514)
Q Consensus 90 ~~l~~l~~--~~~gd----~v-~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (514)
.+++++.. ..+|| .| ..+..+|.....++...+..... .. |
T Consensus 103 ~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~-~~--------------------------~----- 150 (389)
T PRK01278 103 CAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYL-EG--------------------------F----- 150 (389)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhc-cc--------------------------C-----
Confidence 99987632 12444 44 55555666655444433321100 00 0
Q ss_pred ccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC
Q psy16848 163 ICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH 242 (514)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~ 242 (514)
.........++.
T Consensus 151 --------------------------------------------------------------------~~~~~~~~~~~~ 162 (389)
T PRK01278 151 --------------------------------------------------------------------GPLVPGFDQVPF 162 (389)
T ss_pred --------------------------------------------------------------------CCCCCCceEeCC
Confidence 000001233456
Q ss_pred CChhHHHHHHhhccCCCceEEEEecCCCCCc-cccC---HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCcc-ccCCC
Q psy16848 243 NDVNHLTQVLENMDVKIPKLVAFETVHSMTG-AICP---LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIG-ERDGQ 316 (514)
Q Consensus 243 ~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG-~~~~---l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~-~~~~~ 316 (514)
+|.+.+++.+. +++++|++++++|++| .+++ +++|+++|++||+++|+||+|+ +|+.|. .+. +..+.
T Consensus 163 ~d~~~l~~~l~----~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~---~~~~~~~~~ 235 (389)
T PRK01278 163 GDIEALKAAIT----PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK---LFAHEWAGV 235 (389)
T ss_pred CCHHHHHHhhC----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc---ceeecccCC
Confidence 67777777764 3689999999999999 4445 8999999999999999999999 444332 221 23333
Q ss_pred ccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy16848 317 LHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVA 393 (514)
Q Consensus 317 ~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 393 (514)
.+|++ |++|.+++ | |++++++++.+.+....... +.+.+++.++++.++|+.+.++. ..++++++.+
T Consensus 236 --~pdi~--t~sK~l~~-G~~ig~~~~~~~~~~~~~~~~~~~--t~~~~~~~~aaa~a~l~~l~~~~---~~~~~~~~~~ 305 (389)
T PRK01278 236 --TPDIM--AVAKGIGG-GFPLGACLATEEAAKGMTPGTHGS--TYGGNPLAMAVGNAVLDVILAPG---FLDNVQRMGL 305 (389)
T ss_pred --CCCEE--EEehhccC-CcceEEEEEcHHHHhccCCCCCCC--CCCccHHHHHHHHHHHHHHhhhH---HHHHHHHHHH
Confidence 57876 89999985 5 89999999888776554444 44688999999999999874433 4556666666
Q ss_pred HHHHHHHhC--CCc----cccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHH
Q psy16848 394 YLRNELIQI--GFP----VEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMI 467 (514)
Q Consensus 394 ~l~~~L~~~--g~~----~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~i 467 (514)
++.+.|+++ ..+ .+.+.+.++.+++.. +..++++.|+ ++||.+.|+ +.+.+|++++..++++++
T Consensus 306 ~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~--~~~~~~~~l~-~~GV~~~p~-------~~~~lR~~p~~~~~~~~i 375 (389)
T PRK01278 306 YLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVV--PNRDLVQALR-DEGLLTVGA-------GDNVVRLLPPLIITEEEI 375 (389)
T ss_pred HHHHHHHHHHhhCCCceeeEecccEEEEEEEec--CHHHHHHHHH-HCCeEEeec-------CCCEEEEeCCcccCHHHH
Confidence 666666553 121 223455677777643 4678999997 789998764 246899999888999999
Q ss_pred HHHHHHHHHHHHH
Q psy16848 468 DKFVTDLLAVWKS 480 (514)
Q Consensus 468 d~~~~~l~~~l~~ 480 (514)
++++++|++++++
T Consensus 376 ~~~l~~l~~~l~~ 388 (389)
T PRK01278 376 DEALERLERAAES 388 (389)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998865
No 37
>PRK12414 putative aminotransferase; Provisional
Probab=99.97 E-value=6.4e-28 Score=246.67 Aligned_cols=339 Identities=15% Similarity=0.168 Sum_probs=237.5
Q ss_pred CCceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-----cEEEEecccccc
Q psy16848 16 SNRVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-----AGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~i~~~sGt~a~ 88 (514)
++..++|+..+. +..++.+.+++.+.+... ...+....|..++.+++++++++++|.+ ..+++++|++++
T Consensus 27 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al 103 (384)
T PRK12414 27 AQHDALNLSQGAPNFAPDPALVEGVARAMRDG---HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGL 103 (384)
T ss_pred HhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhC---CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHH
Confidence 344678886533 334778888888877642 1223334567788889999998888752 356566667777
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
..++.+++. +||.|+++.++|......++..|.+++.++..+ +.
T Consensus 104 ~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~--------------------------------- 147 (384)
T PRK12414 104 YAAISALVH--PGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-ED--------------------------------- 147 (384)
T ss_pred HHHHHHhcC--CCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cc---------------------------------
Confidence 888888866 999999999999887766666666655443210 00
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
. .-|.+.+
T Consensus 148 ---------------------------~---------------------------------------------~~d~~~l 155 (384)
T PRK12414 148 ---------------------------F---------------------------------------------RVNWDEV 155 (384)
T ss_pred ---------------------------c---------------------------------------------ccCHHHH
Confidence 0 0133444
Q ss_pred HHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCccCceEEE
Q psy16848 249 TQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLHNMDIIS 324 (514)
Q Consensus 249 ~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~~di~~ 324 (514)
++.+ +++++++++++++||||.+++ +++|.++|++||+++|+||+|....+ +....++..... ..+..+++
T Consensus 156 ~~~l----~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~-~~~~~i~~ 230 (384)
T PRK12414 156 AAAI----TPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRE-LAERSVIV 230 (384)
T ss_pred Hhhc----CcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcC-ccCcEEEE
Confidence 4333 346889999999999999988 78889999999999999999995433 222212222221 12467999
Q ss_pred cCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy16848 325 GTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQ 401 (514)
Q Consensus 325 ~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 401 (514)
.||||.+|.+| ||+++++++++.+....... ..+.+.+.+.++...|+. .....+.++.++++++.+.+.|++
T Consensus 231 ~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~--~~~~s~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~ 306 (384)
T PRK12414 231 SSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFM--VFSADTPMQHAFAEALAE--PASYLGLGAFYQRKRDLLARELAG 306 (384)
T ss_pred ecccccccCccceEEEEecCHHHHHHHHHHHhhe--ecCCCcHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998778 99999999998887765443 235667777777777752 123345778889999999999999
Q ss_pred CCCccccCCCcE-EEEEeCC--CccHHHHHHHHHHhCCeEEecccCCCCC-CCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 402 IGFPVEHTPSHI-IPIKIGN--PALNTKICDMLLKEKGHYVQPINYPTVP-VGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 402 ~g~~~~~~~~~~-~~i~l~~--~~~~~~~~~~Ll~~~GI~v~~~~~~~~~-~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
.|+.+..+.+++ ++++++. .....+++..+++++||.+.|+..+... .+.+++|++++. +++++++++++|.+
T Consensus 307 ~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 307 SRFELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred CCCeecCCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 887777776664 4456653 2245677766656899999999865432 235799999993 68899999988864
No 38
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.97 E-value=8.2e-28 Score=247.27 Aligned_cols=340 Identities=15% Similarity=0.157 Sum_probs=237.3
Q ss_pred CCceeeecccCCC--CCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC---C-cEEEEeccc-ccc
Q psy16848 16 SNRVTCRLSSVQY--KVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK---E-AGLVFTSCY-VAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~~~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~---~-~~i~~~sGt-~a~ 88 (514)
.+..++|+..++. ..++.+.+++.+.+.... .+ ++. ..|..++.+.+.+.+.+..|. + ..+++++|+ +++
T Consensus 30 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~-~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al 106 (399)
T PRK07681 30 AGHKMIDLSIGNPDMPPADFVREEMVHTANQKE-SY-GYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGL 106 (399)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccc-cC-CCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHH
Confidence 3567899965543 346778888877765421 11 111 235556666666666655442 2 445566655 556
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
..++.+++. +||.|+++.++|......++..|.+++.++.++.+ .|
T Consensus 107 ~~~~~~~~~--~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~---------------------~~----------- 152 (399)
T PRK07681 107 VHLPMVYAN--PGDIILVPDPGYTAYETGIQMAGATSYYMPLKKEN---------------------DF----------- 152 (399)
T ss_pred HHHHHHhCC--CCCEEEECCCCccchHHHHHhcCCEEEEEecCCCC---------------------CC-----------
Confidence 666666765 99999999999988877777777766655431000 00
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
..|++.+
T Consensus 153 -------------------------------------------------------------------------~~d~~~l 159 (399)
T PRK07681 153 -------------------------------------------------------------------------LPDLELI 159 (399)
T ss_pred -------------------------------------------------------------------------cCCHHHH
Confidence 0023333
Q ss_pred HHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC-CCCCccccCCCccCceEEE
Q psy16848 249 TQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE-HGAGIGERDGQLHNMDIIS 324 (514)
Q Consensus 249 ~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~-~~~~~~~~~~~~~~~di~~ 324 (514)
++.+ .++++++++++||||||.+++ +++|.++|++||+++|+||+|....... ...++..... ..+.++++
T Consensus 160 ~~~~----~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~-~~~~~i~~ 234 (399)
T PRK07681 160 PEEI----ADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPG-AKEVGVEI 234 (399)
T ss_pred HHhc----cccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCC-CcccEEEE
Confidence 3333 345889999999999999999 7889999999999999999999544322 1112222221 22467999
Q ss_pred cCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy16848 325 GTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQ 401 (514)
Q Consensus 325 ~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 401 (514)
+||||.+|.+| ||+++++++++.+....... ..+.+.+.+.++.+.++.. ..++++.++.++++++.+.+.|++
T Consensus 235 ~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 311 (399)
T PRK07681 235 NSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSNT--DYGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRT 311 (399)
T ss_pred eecccccCCccceeEEEecCHHHHHHHHHHHhhc--ccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999778 99999999999887765433 2356777788888877643 245677888889999999999999
Q ss_pred CCCccccCC-CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 402 IGFPVEHTP-SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 402 ~g~~~~~~~-~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
.|+.+..+. +.++++.++...+..++++.+++++||.+.|+..+. ..+++++|++++ .+++++++++++|++
T Consensus 312 ~g~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~-~~~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 312 FGWNVDKPAGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFG-PHGEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred CCCcccCCCeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhC-cCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 888765454 557788887666678899999755999999988643 334579999998 468999999999987
No 39
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.2e-27 Score=246.18 Aligned_cols=347 Identities=14% Similarity=0.083 Sum_probs=242.8
Q ss_pred eeeecccC--C-CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC-----CcEEEEecccccccc
Q psy16848 19 VTCRLSSV--Q-YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK-----EAGLVFTSCYVANDS 90 (514)
Q Consensus 19 ~~~d~~~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-----~~~i~~~sGt~a~~~ 90 (514)
..+||... + +..+|.+.+++.+.+...+. .++....|..++.+.+++++++++|. ++.++++++++++..
T Consensus 40 ~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~ 117 (405)
T PRK06207 40 RPVDFSHGDVDAHEPTPGAFELFSAGVERGGV--QAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFL 117 (405)
T ss_pred CceecCCcCCCCCCCCHHHHHHHHHHHhcCCC--ccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHH
Confidence 35677532 2 22356788888887765221 22333456778888888888888773 334444445667778
Q ss_pred chhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHh
Q psy16848 91 TLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 91 ~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
++.++.. +||.|+++.+.|......++..|++++.++....+ .
T Consensus 118 ~~~~l~~--~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~-~---------------------------------- 160 (405)
T PRK06207 118 AVAATVA--RGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLS-A---------------------------------- 160 (405)
T ss_pred HHHHhcC--CCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccC-c----------------------------------
Confidence 8877766 99999999999998887777777776654321000 0
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQ 250 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 250 (514)
..+. ..|.+.+++
T Consensus 161 ----------------------~~~~---------------------------------------------~~d~~~l~~ 173 (405)
T PRK06207 161 ----------------------DKRA---------------------------------------------GLDLDQLEE 173 (405)
T ss_pred ----------------------ccCC---------------------------------------------CcCHHHHHH
Confidence 0000 013444444
Q ss_pred HHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCccCceEEEcC
Q psy16848 251 VLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLHNMDIISGT 326 (514)
Q Consensus 251 ~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~~di~~~S 326 (514)
.++ ++++++++++|+||||.+++ +++|.++|++||+++|+||+|....+ +....++... ....+..++++|
T Consensus 174 ~~~----~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~-~~~~~~vi~i~S 248 (405)
T PRK06207 174 AFK----AGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRAL-PIDPENVITIMG 248 (405)
T ss_pred hhh----hcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcC-CCCcCcEEEEec
Confidence 443 35789999999999999999 78899999999999999999995433 3222122211 112357799999
Q ss_pred CcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-
Q psy16848 327 LGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI- 402 (514)
Q Consensus 327 ~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 402 (514)
|||.++.+| ||+++++++++.+......+ +.+.+.+.+.++...++.. ..++++.++.++++++.+.+.|++.
T Consensus 249 fSK~~~lpGlRiG~ii~~~~l~~~~~~~~~~~--~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~ 325 (405)
T PRK06207 249 PSKTESLSGYRLGVAFGSPAIIDRMEKLQAIV--SLRAAGYSQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVE 325 (405)
T ss_pred chhhccCcccceEEEEcCHHHHHHHHHHHhHh--ccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999668 99999999999888766544 3345667777777777531 1345667777888888899999877
Q ss_pred CCccccCC-CcEEEEEeCC-CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 403 GFPVEHTP-SHIIPIKIGN-PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 403 g~~~~~~~-~~~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
++.+..+. +.+++++++. ..+..++++.|++++||.+.|+..+. ....+++|++++. +.+++++.+++|++++++
T Consensus 326 ~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~-~~~~~~~Ris~~~--~~~~l~~al~rl~~~l~~ 402 (405)
T PRK06207 326 GVFVRAPQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFS-PHTADSIRLNFSQ--DHAAAVAAAERIAQLIER 402 (405)
T ss_pred CceecCCCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhC-CCCCCeEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 77766565 4577888875 34577899998657899999998643 2346799999984 689999999999999876
Q ss_pred cC
Q psy16848 481 LD 482 (514)
Q Consensus 481 ~~ 482 (514)
++
T Consensus 403 ~~ 404 (405)
T PRK06207 403 YR 404 (405)
T ss_pred hh
Confidence 53
No 40
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.97 E-value=2.8e-28 Score=244.16 Aligned_cols=304 Identities=19% Similarity=0.187 Sum_probs=228.7
Q ss_pred CCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC--CcEEEEeccccccccchhhccccCC
Q psy16848 26 VQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK--EAGLVFTSCYVANDSTLFTLGKMIP 100 (514)
Q Consensus 26 ~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~i~~~sGt~a~~~~l~~l~~~~~ 100 (514)
++||+ ||.+.++..+++++|+ |..++++++++++++++|. +.+++++||++|+..++.++.. |
T Consensus 27 ~~ylgl~~~~~~~~~~~~~~~~~~----------g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~--~ 94 (346)
T TIGR03576 27 YDLTGLAGGFKIDEEDLELLETYV----------GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEP--P 94 (346)
T ss_pred cccccCCCChhHHHHHHHHHHHhc----------CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCC--C
Confidence 46786 9999999999999974 3458999999999999998 7889999999999999999976 9
Q ss_pred CceEEec---CccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcC
Q psy16848 101 GLHYISD---AGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHG 177 (514)
Q Consensus 101 gd~v~~~---~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (514)
||.|++. .+.|.+...+++..|++++.+ .+.++
T Consensus 95 gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~--~~l~~------------------------------------------ 130 (346)
T TIGR03576 95 GRKVVHYLPEKPAHPSIPRSCKLAGAEYFES--DELSE------------------------------------------ 130 (346)
T ss_pred CCEEEECCCCCCCchhHHHHHHHcCCEEecc--CCHHH------------------------------------------
Confidence 9999853 579999988888888765322 22221
Q ss_pred ceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccC
Q psy16848 178 ALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDV 257 (514)
Q Consensus 178 ~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~ 257 (514)
++. .
T Consensus 131 --------------------------------------------------------------------------l~~--~ 134 (346)
T TIGR03576 131 --------------------------------------------------------------------------LKK--I 134 (346)
T ss_pred --------------------------------------------------------------------------Hhh--C
Confidence 111 1
Q ss_pred CCceEEEEecCCCCCcccc---CHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccc-cC
Q psy16848 258 KIPKLVAFETVHSMTGAIC---PLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAF-GN 333 (514)
Q Consensus 258 ~~~~~vv~~~~~nptG~~~---~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l-g~ 333 (514)
+++++|+++. +|++|.++ ++++|.++|+++|+++++||+|+.+..+..+.+.. . ..+.|++++||||++ |.
T Consensus 135 ~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~--~--~~~~divv~s~SKalaG~ 209 (346)
T TIGR03576 135 DGTSLVVITG-STMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPA--L--DLGADLVVTSTDKLMDGP 209 (346)
T ss_pred cCceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCH--H--HcCCcEEEeccchhcccc
Confidence 2356677654 68899985 48999999999999999999999766443222111 1 124689999999988 56
Q ss_pred CCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCCcE
Q psy16848 334 IGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPSHI 413 (514)
Q Consensus 334 ~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 413 (514)
.|||+++++++++.+.+....+.+ +.+++.++++.++|+... .+..++.++++.+.+.+.+++ +.+.++.+++
T Consensus 210 r~G~v~~~~~li~~l~~~~~~~~~--s~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~--~~~~~~~~~f 282 (346)
T TIGR03576 210 RGGLLAGRKELVDKIKSVGEQFGL--EAQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDK--LNVERTPTGF 282 (346)
T ss_pred ceEEEEeCHHHHHHHHHhhcCccc--CccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHh--CCCCcCCCeE
Confidence 679999999999999988877755 467778888899987542 245678888888888888875 4444556667
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHH---HHHHHHHHHHHHH
Q psy16848 414 IPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTRE---MIDKFVTDLLAVW 478 (514)
Q Consensus 414 ~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e---~id~~~~~l~~~l 478 (514)
+++.++.. +..+++..+++++||.++|+..+ +..++++|++++. .++ +++.++++|++.+
T Consensus 283 ~~~~~~~~-~~~~~~~~ll~~~gV~v~~~~~f--~~~~~~vRis~~~--~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 283 VIKGVEEE-KLIEIGLDLLRNYGIITITAVGM--PGASKTLRFDLAA--KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred EEEeCCCC-CHHHHHHHHHHhCCEEEeCCccc--CCCCCeEEEEEec--ChHHhcCHHHHHHHHHhcc
Confidence 77777542 24466667777999999987653 2236799999982 333 7999999998753
No 41
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.97 E-value=6.2e-28 Score=247.08 Aligned_cols=341 Identities=17% Similarity=0.112 Sum_probs=243.4
Q ss_pred eeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC----CCcEEEEeccccccccch
Q psy16848 19 VTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ----KEAGLVFTSCYVANDSTL 92 (514)
Q Consensus 19 ~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~~~i~~~sGt~a~~~~l 92 (514)
..+++..++ +..++.+.+++.+.+.... ..+....|..++.+++.+++.+.+| .+..++++++++++..++
T Consensus 25 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 101 (382)
T PRK06108 25 GVLPLWFGESDLPTPDFIRDAAAAALADGE---TFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101 (382)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHH
Confidence 467775433 3346788888888776521 1222334667777888888777766 234555566677888888
Q ss_pred hhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhh
Q psy16848 93 FTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEV 172 (514)
Q Consensus 93 ~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (514)
.++.. +||.|+++.+.|......++..|.+++.++.++.+
T Consensus 102 ~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-------------------------------------- 141 (382)
T PRK06108 102 QALVG--PGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGG-------------------------------------- 141 (382)
T ss_pred HHhcC--CCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCC--------------------------------------
Confidence 77766 99999999999988877777777766655431000
Q ss_pred hhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHH
Q psy16848 173 SHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVL 252 (514)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l 252 (514)
.+. ..|.+.+++.+
T Consensus 142 ---------------------~~~---------------------------------------------~~d~~~l~~~~ 155 (382)
T PRK06108 142 ---------------------GGW---------------------------------------------TLDLDRLLAAI 155 (382)
T ss_pred ---------------------CCc---------------------------------------------cCCHHHHHHhc
Confidence 000 01334444333
Q ss_pred hhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC--CCCCccccCCCccCceEEEcCC
Q psy16848 253 ENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE--HGAGIGERDGQLHNMDIISGTL 327 (514)
Q Consensus 253 ~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~--~~~~~~~~~~~~~~~di~~~S~ 327 (514)
+++++++++++|+||||.+++ +++|.++|+++|+++|+||+|.....+. ....+..... ..+.+++++||
T Consensus 156 ----~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~ 230 (382)
T PRK06108 156 ----TPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAE-PDDRIIFVNSF 230 (382)
T ss_pred ----CccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCC-CcCCEEEEeec
Confidence 346889999999999999998 6889999999999999999999554431 1111111111 12568999999
Q ss_pred cccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-C
Q psy16848 328 GKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-G 403 (514)
Q Consensus 328 sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 403 (514)
||.+|.+| ||+++++++++.+....... ..+.+.+.+.++..+++.. ...+++.+++++++++++.+.|++. +
T Consensus 231 SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~ 307 (382)
T PRK06108 231 SKNWAMTGWRLGWLVAPPALGQVLEKLIEYN--TSCVAQFVQRAAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPG 307 (382)
T ss_pred hhhccCcccceeeeeCCHHHHHHHHHHHHhc--ccCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99998767 99999999998887654322 2356778888888888643 3456778889999999999999887 7
Q ss_pred CccccCCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 404 FPVEHTPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 404 ~~~~~~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
+.+..+.++ ++++.++...+..++++.|++++||.+.++..+. +.+.+++|++++. +++++++++++|+++++
T Consensus 308 ~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~-~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 308 VEVAKPDGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFG-PGGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred CcccCCCeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 777766655 5577887655677899998767899999988643 3456899999995 89999999999998764
No 42
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=7.5e-28 Score=247.95 Aligned_cols=345 Identities=14% Similarity=0.181 Sum_probs=242.3
Q ss_pred ceeeecccCCCCCChhHHHHHHHHHHHhCCCCCCcCc--ccCcchHHHHHHHHHHhHcCC-C-c-EEEEeccccccccch
Q psy16848 18 RVTCRLSSVQYKVPKGGRKCLGEALEKFGTGAGGTRN--ISGNSLFHEKLEEDVAKLHQK-E-A-GLVFTSCYVANDSTL 92 (514)
Q Consensus 18 ~~~~d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~~~-~-~-~i~~~sGt~a~~~~l 92 (514)
..|.|-++... .++.+.+++.+.++.+......... .....+..+++++.+++++|. + + .++++|+|+++..++
T Consensus 20 ~~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~ 98 (401)
T PRK10874 20 GVYLDSAATAL-KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVA 98 (401)
T ss_pred eEEEeCCcccC-CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHH
Confidence 45666655543 3568889998888764322221111 112356678899999999997 3 3 444555677777777
Q ss_pred hhcc--ccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHh
Q psy16848 93 FTLG--KMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 93 ~~l~--~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
.++. .+.+||+|++.+++|.+....+.
T Consensus 99 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~--------------------------------------------------- 127 (401)
T PRK10874 99 QSYARPRLQPGDEIIVSEAEHHANLVPWL--------------------------------------------------- 127 (401)
T ss_pred HHhhhccCCCcCEEEECCcchHHHHHHHH---------------------------------------------------
Confidence 7763 13599999999999988642211
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-CChhHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-NDVNHLT 249 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~ 249 (514)
......|++++.++. .+.....
T Consensus 128 ---------------------------------------------------------~~~~~~g~~v~~v~~~~~~~~d~ 150 (401)
T PRK10874 128 ---------------------------------------------------------MVAQQTGAKVVKLPLGADRLPDV 150 (401)
T ss_pred ---------------------------------------------------------HHHHHhCCEEEEEecCCCCcCCH
Confidence 111223444444441 1222223
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcc
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGK 329 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK 329 (514)
+.+++..+++++++++++++||||...|+++|.++|+++|+++++|++|+.+... + +.. ..++|++++|+||
T Consensus 151 ~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~-----~-~~~--~~~~d~~~~s~~K 222 (401)
T PRK10874 151 DLLPELITPRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFP-----A-DVQ--ALDIDFYAFSGHK 222 (401)
T ss_pred HHHHHhcCcCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCccccccc-----C-Cch--hcCCCEEEEeccc
Confidence 3344444567899999999999999999999999999999999999999866541 1 122 3368999999999
Q ss_pred cccCCC-eEEEecHHHHHHHHhhcCc------------------eEec-cCCcHHHHHHHHHHHHHhhhchHHHHHHHHH
Q psy16848 330 AFGNIG-GYIVGTKNFIDTIRSYAAG------------------FIFT-TSLPPTVLAGAREAIRILSSQEGVELRAKHQ 389 (514)
Q Consensus 330 ~lg~~G-G~l~~~~~~~~~l~~~~~~------------------~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 389 (514)
.+|+.| |+++.++++++.+.....+ ..+. .+.+.....++.++++.+.+.+..++.++.+
T Consensus 223 ~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~ 302 (401)
T PRK10874 223 LYGPTGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSR 302 (401)
T ss_pred ccCCCccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 889878 9999999988876533211 1111 1345567788888888776667777888899
Q ss_pred HHHHHHHHHHHhC-CCcccc-CCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCC-----CCCcEEEEEeCCCC
Q psy16848 390 DIVAYLRNELIQI-GFPVEH-TPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVP-----VGEEKIRLAPTPFH 462 (514)
Q Consensus 390 ~~~~~l~~~L~~~-g~~~~~-~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~-----~~~~~iRl~~~~~~ 462 (514)
++.+++.+.|+++ |+.+.. +..+++.+.++. ....++.+.| .++||.++++..|..+ ...+++|++++.++
T Consensus 303 ~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~-~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~n 380 (401)
T PRK10874 303 SLATLAEDALAKLPGFRSFRCQDSSLLAFDFAG-VHHSDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYN 380 (401)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECC-cCHHHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEecccC
Confidence 9999999999987 776654 345577777654 3457888888 5899999988765421 12468999999999
Q ss_pred CHHHHHHHHHHHHHHHHHc
Q psy16848 463 TREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 463 t~e~id~~~~~l~~~l~~~ 481 (514)
|++|+++++++|+++++.+
T Consensus 381 t~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 381 TQSDVDALVNAVDRALELL 399 (401)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988764
No 43
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.97 E-value=4.7e-28 Score=249.11 Aligned_cols=338 Identities=22% Similarity=0.243 Sum_probs=246.7
Q ss_pred cCCceeeecccCCCC------CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEecccccc
Q psy16848 15 KSNRVTCRLSSVQYK------VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAN 88 (514)
Q Consensus 15 ~~g~~~~d~~~~~~~------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~ 88 (514)
.+|++++||.++ |+ .||++.+++.+++++++.... .. ..+...+++++++++++.+++++++||++||
T Consensus 34 ~~g~~~lD~~s~-~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~---~~--~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~ 107 (401)
T TIGR01885 34 VEGKRYLDFLSA-YSAVNQGHCHPKIVKALTEQAQKLTLSSR---AF--YNDVFGEFAEYVTKLFGYDKVLPMNTGAEAV 107 (401)
T ss_pred CCCCEEEEcccC-HhhccCCCCCHHHHHHHHHHHHhcccccc---cc--CCHHHHHHHHHHHhhcCCCEEEEeCccHHHH
Confidence 478889999774 55 289999999999998653221 11 3577899999999999988999999999999
Q ss_pred ccchhhcccc--------CCCceEEecCcc-chhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccc
Q psy16848 89 DSTLFTLGKM--------IPGLHYISDAGN-HASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSM 159 (514)
Q Consensus 89 ~~~l~~l~~~--------~~gd~v~~~~~~-h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~ 159 (514)
+.++..+... ...+.|+..... |.+++.++...+........ .
T Consensus 108 e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~----------------~------------ 159 (401)
T TIGR01885 108 ETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNF----------------G------------ 159 (401)
T ss_pred HHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccccc----------------C------------
Confidence 9999875321 134566666555 65677776654421100000 0
Q ss_pred cCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEE
Q psy16848 160 TGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKII 239 (514)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~ 239 (514)
..-..+..
T Consensus 160 ------------------------------------------------------------------------~~~~~~~~ 167 (401)
T TIGR01885 160 ------------------------------------------------------------------------PYVPGFKK 167 (401)
T ss_pred ------------------------------------------------------------------------CCCCCceE
Confidence 00012355
Q ss_pred ecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCcc-ccC
Q psy16848 240 YRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIG-ERD 314 (514)
Q Consensus 240 v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~-~~~ 314 (514)
++++|.+.+++.+++.. +++++|+++++++++|...| +++|+++|++||+++|+||+|+ | +|+.|.++. +..
T Consensus 168 ~~~~d~~~le~~l~~~~-~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g-~g~~G~~~~~~~~ 244 (401)
T TIGR01885 168 IPYNNLEALEEALEDHG-PNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-G-LGRTGKLLCVDHE 244 (401)
T ss_pred eCCCCHHHHHHHHHhcC-CCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCccchhhHHhhc
Confidence 66778888888886543 56789999999999999998 8999999999999999999997 3 233333321 223
Q ss_pred CCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHH
Q psy16848 315 GQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDI 391 (514)
Q Consensus 315 ~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 391 (514)
+. .+|++ +++|.+++.+ |++++++++++.+....... +.+.+++.++++.++|+.+.++. +.++.+++
T Consensus 245 ~~--~~di~--~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~--t~~~~p~~~~aa~a~L~~i~~~~---l~~~~~~~ 315 (401)
T TIGR01885 245 NV--KPDIV--LLGKALSGGVYPVSAVLADDDVMLTIKPGEHGS--TYGGNPLACAVAVAALEVLEEEK---LAENAEKL 315 (401)
T ss_pred CC--CCCEE--EeeccccCCCCCcEEEEEcHHHHhhccCCCCCC--CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHH
Confidence 33 67888 6789997633 77889999888776533332 44668999999999999886544 56778888
Q ss_pred HHHHHHHHHhCCCccc---cCCCcEEEEEeCCCc---cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHH
Q psy16848 392 VAYLRNELIQIGFPVE---HTPSHIIPIKIGNPA---LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTRE 465 (514)
Q Consensus 392 ~~~l~~~L~~~g~~~~---~~~~~~~~i~l~~~~---~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e 465 (514)
.+++.+.|++++.+++ .+.+.++.+.++... ...++.+.|. ++||.+.+. +.+.+|++++..++++
T Consensus 316 ~~~~~~~L~~l~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~-------~~~~lRi~p~l~~t~~ 387 (401)
T TIGR01885 316 GEIFRDQLKKLPKPIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLK-EKGLLAKPT-------HGNIIRLAPPLVITEE 387 (401)
T ss_pred HHHHHHHHHhccCCceeEEeecCeeEEEEeccCcchhHHHHHHHHHH-hCCEEEEec-------CCCEEEEeCCccCCHH
Confidence 9999999998854432 346777777776532 5678999996 899999743 2468999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy16848 466 MIDKFVTDLLAVW 478 (514)
Q Consensus 466 ~id~~~~~l~~~l 478 (514)
++++++++|++++
T Consensus 388 ~i~~~l~~l~~~l 400 (401)
T TIGR01885 388 QLDEGLEIIKKVI 400 (401)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998875
No 44
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.97 E-value=8.7e-28 Score=249.19 Aligned_cols=344 Identities=17% Similarity=0.139 Sum_probs=251.4
Q ss_pred ceeeecccCC----CCCChhHHHHHHHHHHHhCCC-CCCcCcccCcchHHHHHHHHHHhHcCC---CcEEEEecccc-cc
Q psy16848 18 RVTCRLSSVQ----YKVPKGGRKCLGEALEKFGTG-AGGTRNISGNSLFHEKLEEDVAKLHQK---EAGLVFTSCYV-AN 88 (514)
Q Consensus 18 ~~~~d~~~~~----~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~~~---~~~i~~~sGt~-a~ 88 (514)
...+||.... ++....+.+++.+.++..... ...+....|..++.+.+.+++....|. +.-|++|+|++ |+
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence 4567885443 334567788887877765433 222233345666666666666644442 33577777776 46
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
.+++..+.. |||+|++++++|..+...++..|.+++.++.++
T Consensus 169 ~l~~~~l~~--pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~------------------------------------ 210 (459)
T COG1167 169 DLLLRLLLD--PGDTVLVEDPTYPGALQALEALGARVIPVPVDE------------------------------------ 210 (459)
T ss_pred HHHHHHhCC--CCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCC------------------------------------
Confidence 666666665 999999999999999999999999888766531
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
.| -|.+.+
T Consensus 211 ---------------------------~G---------------------------------------------~~~e~l 218 (459)
T COG1167 211 ---------------------------DG---------------------------------------------IDPEAL 218 (459)
T ss_pred ---------------------------CC---------------------------------------------CCHHHH
Confidence 00 033444
Q ss_pred HHHHhhccCCCce-EEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccC-CCCCCccccCCCccCceEE
Q psy16848 249 TQVLENMDVKIPK-LVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYG-EHGAGIGERDGQLHNMDII 323 (514)
Q Consensus 249 ~~~l~~~~~~~~~-~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g-~~~~~~~~~~~~~~~~di~ 323 (514)
++.+++. ++| ++++++.|||||.+++ -++|.++|++||+++|+||+|+...+. .+..++...+ ..+.+++
T Consensus 219 e~~~~~~---~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld--~~~rViy 293 (459)
T COG1167 219 EEALAQW---KPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALD--APGRVIY 293 (459)
T ss_pred HHHHhhc---CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhC--CCCCEEE
Confidence 4444332 234 4667789999999999 499999999999999999999955543 3332233222 2488999
Q ss_pred EcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHH-hhhchHHHHHHHHHHHHHHHHHHH
Q psy16848 324 SGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRI-LSSQEGVELRAKHQDIVAYLRNEL 399 (514)
Q Consensus 324 ~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L 399 (514)
++||||.+++ | ||+++++++++.+....... +...+.+.+.++...+.. .-..++.++++.++++++.+.+.|
T Consensus 294 ~gSFSK~l~P-glRlG~vv~p~~~~~~~~~~k~~~--~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L 370 (459)
T COG1167 294 LGSFSKTLAP-GLRLGYVVAPPELIEKLLRLKQAA--DLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEAL 370 (459)
T ss_pred Eeeehhhccc-ccceeeeeCCHHHHHHHHHHHHHh--cCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998 5 99999999999988776665 446777777777777762 125678899999999999999999
Q ss_pred HhC---CCccccCC-CcEEEEEeCCCccHHHHHHHHHHhCCeEEec-ccCCCCCC-CCcEEEEEeCCCCCHHHHHHHHHH
Q psy16848 400 IQI---GFPVEHTP-SHIIPIKIGNPALNTKICDMLLKEKGHYVQP-INYPTVPV-GEEKIRLAPTPFHTREMIDKFVTD 473 (514)
Q Consensus 400 ~~~---g~~~~~~~-~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~-~~~~~~~~-~~~~iRl~~~~~~t~e~id~~~~~ 473 (514)
++. ...+..+. |.++|+++++..+..++.+.++ ++|+.+.+ +..+.... ..+++|++++ ..+++++++.++.
T Consensus 371 ~~~~~~~~~~~~p~gG~flwl~l~~~~~~~~l~~~a~-~~gv~i~~~g~~f~~~~~~~~~~Rl~~s-~~~~e~i~~gi~~ 448 (459)
T COG1167 371 AEYLPELATWTRPEGGLFLWLELPEGIDARELLAAAL-EKGVVVTPLGSAFSADGDPRNGLRLSFS-SPSEEEIEEGIKR 448 (459)
T ss_pred HHhCCCCeeeecCCceEEEEEEcCCCCCHHHHHHHHH-HCCCEEEcCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHH
Confidence 997 24445555 4588899999888899999996 99999998 77544433 4679999998 5679999999999
Q ss_pred HHHHHHHc
Q psy16848 474 LLAVWKSL 481 (514)
Q Consensus 474 l~~~l~~~ 481 (514)
|.+++++.
T Consensus 449 l~~~~~~~ 456 (459)
T COG1167 449 LAALLREA 456 (459)
T ss_pred HHHHHHHH
Confidence 99988764
No 45
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.97 E-value=9.4e-28 Score=246.07 Aligned_cols=342 Identities=17% Similarity=0.161 Sum_probs=231.8
Q ss_pred CCceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC---Cc-EEEEeccc-ccc
Q psy16848 16 SNRVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK---EA-GLVFTSCY-VAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~---~~-~i~~~sGt-~a~ 88 (514)
.|..++|+..++ +..++.+.+++.+.+.... ..++....|..++.+++.+++.+..|. +. .+++|+|+ +++
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al 105 (388)
T PRK07366 28 AGKELIDLSLGSSDLPAPAHALEAIAQSLHDPS--THGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGT 105 (388)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcc--cCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHH
Confidence 567788995433 3347788888888765321 112222345555666666666554442 22 46666665 466
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
..++.+++. +||.|+++.++|......++..|.+++.++..... .|
T Consensus 106 ~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~---------------------~~----------- 151 (388)
T PRK07366 106 AHLPLAVLN--PGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAEN---------------------DF----------- 151 (388)
T ss_pred HHHHHHhCC--CCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCcc---------------------CC-----------
Confidence 777777766 99999999999988887777777776654331000 00
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
..|++.+
T Consensus 152 -------------------------------------------------------------------------~~d~~~l 158 (388)
T PRK07366 152 -------------------------------------------------------------------------LPVFADI 158 (388)
T ss_pred -------------------------------------------------------------------------CCCHHHH
Confidence 0022233
Q ss_pred HHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC-C-CCCccccCCCccCceEE
Q psy16848 249 TQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE-H-GAGIGERDGQLHNMDII 323 (514)
Q Consensus 249 ~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~-~-~~~~~~~~~~~~~~di~ 323 (514)
++.+ .++++++++++||||||.+++ +++|.++|++|++++|+||+|....... . ..++..... .....++
T Consensus 159 ~~~~----~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~-~~~~vi~ 233 (388)
T PRK07366 159 PTEV----LAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADP-EKSVSIE 233 (388)
T ss_pred HHhh----cccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCC-CcccEEE
Confidence 2222 235789999999999999999 6888889999999999999999544322 1 112222111 1235688
Q ss_pred EcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy16848 324 SGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELI 400 (514)
Q Consensus 324 ~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 400 (514)
++||||.+|.+| ||+++++++++.+......+. .+.+...+.++.+++.. ...++++.++.++++++.+.+.|+
T Consensus 234 ~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~~~~~--~~~~~~~~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~ 310 (388)
T PRK07366 234 FFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKAVVD--FNQYRGILNGAIAALTG-PQATVQQTVQIFRQRRDAFINALH 310 (388)
T ss_pred EeecccccCCcchhheehcCCHHHHHHHHHHHhhcc--cCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998778 999999999998887665442 23333334444555532 245677889999999999999999
Q ss_pred hCCCccccC-CCcEEEEEeCCC--ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 401 QIGFPVEHT-PSHIIPIKIGNP--ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 401 ~~g~~~~~~-~~~~~~i~l~~~--~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
+.++.+..+ .+.++++.++.. .+..++++.+++++||.+.|+..+. ..+.+++|++++ .+++++++++++|+++
T Consensus 311 ~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~-~~~~~~iRi~~~--~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 311 QIGWPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFG-KSGEGYVRFALV--HDPDILEEAVERIAAF 387 (388)
T ss_pred HCCCcccCCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhC-cCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 888765544 455778888753 2367788888667899999998643 233579999998 4689999999999875
No 46
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.97 E-value=5.4e-28 Score=248.56 Aligned_cols=338 Identities=19% Similarity=0.178 Sum_probs=243.1
Q ss_pred cCCceeeeccc---CCCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccc
Q psy16848 15 KSNRVTCRLSS---VQYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAND 89 (514)
Q Consensus 15 ~~g~~~~d~~~---~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~ 89 (514)
.+|+.++||.+ +.+++ ||++.+++.+++++.... + .. ...+...+++++++++++.++++|++||++|++
T Consensus 36 ~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~-~-~~---~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e 110 (406)
T PRK12381 36 QQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHT-G-NG---YTNEPVLRLAKKLIDATFADRVFFCNSGAEANE 110 (406)
T ss_pred CCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccc-c-Cc---cCCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHH
Confidence 36778888865 46776 799999999999874322 1 11 124667899999999988888999999999999
Q ss_pred cchhhcccc-------CCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCC
Q psy16848 90 STLFTLGKM-------IPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGA 162 (514)
Q Consensus 90 ~~l~~l~~~-------~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (514)
.+++..... ++...|..+..+|.....+++..+.+.... . |
T Consensus 111 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~-~--------------------------~----- 158 (406)
T PRK12381 111 AALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQ-D--------------------------F----- 158 (406)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCccccc-C--------------------------C-----
Confidence 999875321 234566677888888775555444221100 0 0
Q ss_pred ccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC
Q psy16848 163 ICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH 242 (514)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~ 242 (514)
...-..+..+++
T Consensus 159 --------------------------------------------------------------------~~~~~~~~~~~~ 170 (406)
T PRK12381 159 --------------------------------------------------------------------APLPPDIRHAAY 170 (406)
T ss_pred --------------------------------------------------------------------CCCCCCeeEeCC
Confidence 000012345667
Q ss_pred CChhHHHHHHhhccCCCceEEEEecCCCCCcccc-C---HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCcc-ccCCC
Q psy16848 243 NDVNHLTQVLENMDVKIPKLVAFETVHSMTGAIC-P---LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIG-ERDGQ 316 (514)
Q Consensus 243 ~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~-~---l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~-~~~~~ 316 (514)
+|++.+++.+. +++++|++++.+...|... | +++|+++|++||+++|+||+|+ +|+.|. .+. ...++
T Consensus 171 ~d~~~l~~~l~----~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~---~~~~~~~~v 243 (406)
T PRK12381 171 NDLNSASALID----DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGE---LYAYMHYGV 243 (406)
T ss_pred CCHHHHHHhcc----CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcc---hhhhHhhCC
Confidence 78888877774 4688999987766556544 2 8999999999999999999997 444432 221 23333
Q ss_pred ccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy16848 317 LHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVA 393 (514)
Q Consensus 317 ~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 393 (514)
.+|++ |++|++++ | |++++++++++.+....... +.+.+++.++++.++|+.+.++ +++++++++.+
T Consensus 244 --~pDi~--t~sK~l~g-G~~ig~~~~~~~~~~~~~~~~~~~--t~~~~pl~~aaa~a~l~~l~~~---~~~~~~~~~~~ 313 (406)
T PRK12381 244 --TPDVL--TTAKALGG-GFPIGAMLTTEKCASVMTVGTHGT--TYGGNPLASAVAGKVLELINTP---EMLNGVKQRHD 313 (406)
T ss_pred --CCCEE--EehhhhhC-CCceEEEEEcHHHHhhcCCCCCCC--CCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHH
Confidence 68886 99999985 6 88999999998886544333 4478999999999999987543 47888999999
Q ss_pred HHHHHHHhCC--Ccc---ccCCCcEEEEEeCCC--ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHH
Q psy16848 394 YLRNELIQIG--FPV---EHTPSHIIPIKIGNP--ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREM 466 (514)
Q Consensus 394 ~l~~~L~~~g--~~~---~~~~~~~~~i~l~~~--~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~ 466 (514)
++.+.|++++ +.+ +...+.++.+.+++. .....+.+.++ ++||.+.+. +.+.+|++++..+|+++
T Consensus 314 ~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~-~~Gv~v~~~-------g~~~lRl~p~~~~t~~~ 385 (406)
T PRK12381 314 WFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAA-KAGVMVLIA-------GPNVVRFAPALNISEEE 385 (406)
T ss_pred HHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHH-HCCcEEeeC-------CCCEEEEeCCccCCHHH
Confidence 9999998863 332 223456778877653 24567888885 999998632 23589999999899999
Q ss_pred HHHHHHHHHHHHHHcC
Q psy16848 467 IDKFVTDLLAVWKSLD 482 (514)
Q Consensus 467 id~~~~~l~~~l~~~~ 482 (514)
+++++++|+++++++.
T Consensus 386 i~~~~~~l~~~l~~~~ 401 (406)
T PRK12381 386 ITTGLDRFARACERFV 401 (406)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 47
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.97 E-value=1.2e-27 Score=244.81 Aligned_cols=342 Identities=18% Similarity=0.162 Sum_probs=238.4
Q ss_pred cCCceeeecccCCCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----CcEEEEecc-ccc
Q psy16848 15 KSNRVTCRLSSVQYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EAGLVFTSC-YVA 87 (514)
Q Consensus 15 ~~g~~~~d~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~i~~~sG-t~a 87 (514)
..|...+|+..++.. ..+.+.+++.+.+... ....+....|..++.+++++.+.+.+|. +..+++++| +++
T Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~ 103 (383)
T TIGR03540 26 AEGVDVISLGIGDPDLPTPKHIVEALCKAAENP--ENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEG 103 (383)
T ss_pred hcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHH
Confidence 356778999755432 3567888888776531 1122223345556666666666655443 224556555 566
Q ss_pred cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchh
Q psy16848 88 NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK 167 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (514)
+..++..+.. +||.|+++.++|......++..|.+++.++..+.+
T Consensus 104 l~~~~~~~~~--~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~--------------------------------- 148 (383)
T TIGR03540 104 IAHIPLAFVN--PGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEEN--------------------------------- 148 (383)
T ss_pred HHHHHHHhCC--CCCEEEEeCCCCcchHHHHHhcCCEEEEEecCccc---------------------------------
Confidence 7777777765 99999999999988877777777776655431000
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH 247 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~ 247 (514)
|. ..|++.
T Consensus 149 ---------------------------g~---------------------------------------------~~d~~~ 156 (383)
T TIGR03540 149 ---------------------------GF---------------------------------------------LPDFDA 156 (383)
T ss_pred ---------------------------CC---------------------------------------------ccCHHH
Confidence 00 003333
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC-CCCCccccCCCccCceEE
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE-HGAGIGERDGQLHNMDII 323 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~-~~~~~~~~~~~~~~~di~ 323 (514)
+++.+ .++++++++++|+||||.+++ +++|.++|++||+++|+||+|....... ...++..... ..+.+++
T Consensus 157 l~~~~----~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~-~~~~~i~ 231 (383)
T TIGR03540 157 IPEDI----AKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDG-AKDVGIE 231 (383)
T ss_pred HHhhc----cccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCC-cccCEEE
Confidence 33333 346889999999999999999 7999999999999999999998443322 2222222221 1246788
Q ss_pred EcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy16848 324 SGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELI 400 (514)
Q Consensus 324 ~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 400 (514)
++||||.+|.+| ||+++++++++.+....... ..+.+.+.+.++.++++.. ..++++.++.++++++.+.+.|+
T Consensus 232 ~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~ 308 (383)
T TIGR03540 232 FHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTNV--DSGVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALK 308 (383)
T ss_pred EEecccccCCccceeeEEeCCHHHHHHHHHHHHhc--ccCCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998778 99999999998887655433 2345667777777777643 45667788899999999999999
Q ss_pred hCCCccccCCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 401 QIGFPVEHTPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 401 ~~g~~~~~~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
+.++.+..+.++ ++++++++..+..++++.+++++||.+.++..+. ..+++++|++++ .+++++++++++|++
T Consensus 309 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~-~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 309 KIGIDVEKPKATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFG-EYGEGYIRISLT--VPDERLEEAVARIKK 382 (383)
T ss_pred hCCCEecCCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhC-ccCCCeEEEEec--CCHHHHHHHHHHHhh
Confidence 998877766655 5678887666678899998667899999988653 334679999997 567888888877764
No 48
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.97 E-value=1.5e-27 Score=244.33 Aligned_cols=341 Identities=16% Similarity=0.157 Sum_probs=234.8
Q ss_pred CCceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----CcEEEEeccc-ccc
Q psy16848 16 SNRVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EAGLVFTSCY-VAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~i~~~sGt-~a~ 88 (514)
.|...+|+..++ +...+.+.+++.+.+.... ...+....|..++.+++.+.+.+.+|. ++.+++++|+ +++
T Consensus 29 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i 106 (385)
T PRK09276 29 RGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPE--NHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGI 106 (385)
T ss_pred cCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCC--CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 456678886544 3346788888888776421 112222334455666666666555452 2335565554 667
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
..++.+++. +||.|+++.++|......++..|.+++.++..+.+
T Consensus 107 ~~~~~~~~~--~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~---------------------------------- 150 (385)
T PRK09276 107 AHIPLAFVN--PGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEEN---------------------------------- 150 (385)
T ss_pred HHHHHHhCC--CCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCC----------------------------------
Confidence 777777765 99999999999988777777667666654321000
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
|. ..|.+.+
T Consensus 151 --------------------------g~---------------------------------------------~~d~~~l 159 (385)
T PRK09276 151 --------------------------GF---------------------------------------------LPDLDAI 159 (385)
T ss_pred --------------------------CC---------------------------------------------cCCHHHH
Confidence 00 0022333
Q ss_pred HHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccC-CCCCCccccCCCccCceEEE
Q psy16848 249 TQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYG-EHGAGIGERDGQLHNMDIIS 324 (514)
Q Consensus 249 ~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g-~~~~~~~~~~~~~~~~di~~ 324 (514)
++.+ .++++++++++|+||||.+++ +++|.++|++|++++|+||+|.....+ ....++..... ..+.++++
T Consensus 160 ~~~~----~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~~i~~ 234 (385)
T PRK09276 160 PEDV----AKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPG-AKDVGIEF 234 (385)
T ss_pred HHhc----cccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCC-CcCCEEEE
Confidence 3322 346889999999999999999 689999999999999999999854332 12212222211 12467889
Q ss_pred cCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy16848 325 GTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQ 401 (514)
Q Consensus 325 ~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 401 (514)
+||||.+|.+| ||+++++++++.+....... +.+.+.+.+.++..+++.. ..++++.++.++++++++.+.|++
T Consensus 235 ~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 311 (385)
T PRK09276 235 HSLSKTYNMTGWRIGFAVGNADLIAGLGKVKSNV--DSGVFQAIQEAGIAALNGP-QEVVEELRKIYQERRDILVEGLRK 311 (385)
T ss_pred ecchhhcCCcchhheeeeCCHHHHHHHHHHHhhc--cCCCCHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998878 99999999999887765433 3345666777777777532 356677888999999999999999
Q ss_pred CCCccccCCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 402 IGFPVEHTPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 402 ~g~~~~~~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
.++.+..+.++ ++++.+++..+..++++.|++++||.+.++..+. ..+++++|++++ .+++++.+++++|.+
T Consensus 312 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~-~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 312 LGLEVEPPKATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFG-EYGEGYFRIALT--VPDERIEEAVERIKK 384 (385)
T ss_pred CCCcccCCCcceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhC-CCCCCeEEEEeC--CCHHHHHHHHHHHhh
Confidence 88877666655 4678887666678899998756899999988653 334579999998 467788888877754
No 49
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.97 E-value=6.9e-28 Score=248.16 Aligned_cols=334 Identities=17% Similarity=0.219 Sum_probs=237.6
Q ss_pred CCceeeecccCCCC------CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccc
Q psy16848 16 SNRVTCRLSSVQYK------VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAND 89 (514)
Q Consensus 16 ~g~~~~d~~~~~~~------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~ 89 (514)
+|++++|+.++ |. +||++.+++.+++++++.... .+ ..+...+++++++++++.+++++++|||+|++
T Consensus 39 ~g~~~lD~~~~-~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~---~~--~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e 112 (401)
T PRK00854 39 DGNRYLDCLSA-YSAVNQGHCHPKILAAMVEQAGRLTLTSR---AF--RNDQLAPLYEELAALTGSHKVLPMNSGAEAVE 112 (401)
T ss_pred CCCEEEEcCcc-hhhccCCCCCHHHHHHHHHHHhhcccccc---cc--CCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHH
Confidence 67778887543 33 289999999999998764322 11 13678899999999999999999999999999
Q ss_pred cchhhcccc---------CCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc
Q psy16848 90 STLFTLGKM---------IPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT 160 (514)
Q Consensus 90 ~~l~~l~~~---------~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 160 (514)
.+++.+... ++.+.|..+...|.++..++...+....
T Consensus 113 ~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~---------------------------------- 158 (401)
T PRK00854 113 TAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDA---------------------------------- 158 (401)
T ss_pred HHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccc----------------------------------
Confidence 999887421 1123455555555554433221110000
Q ss_pred CCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEe
Q psy16848 161 GAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIY 240 (514)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v 240 (514)
...+......+..+
T Consensus 159 ------------------------------------------------------------------~~~~~~~~~~~~~~ 172 (401)
T PRK00854 159 ------------------------------------------------------------------RGGFGPFTPGFRVV 172 (401)
T ss_pred ------------------------------------------------------------------cccCCCCCCCeEEe
Confidence 00000112345667
Q ss_pred cCCChhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCcc-ccC
Q psy16848 241 RHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIG-ERD 314 (514)
Q Consensus 241 ~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~-~~~ 314 (514)
+++|.+.+++.+. +++++|++++++||+|.+.| +++|+++|++||+++|+||+|+ +|+.|. ++. ...
T Consensus 173 ~~~d~~~le~~i~----~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~---~~~~~~~ 245 (401)
T PRK00854 173 PFGDAEALEAAIT----PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGK---LLAEEHE 245 (401)
T ss_pred CCCCHHHHHHHhC----CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCch---HhHHhhc
Confidence 7788888887764 46899999999999999997 9999999999999999999998 554432 111 123
Q ss_pred CCccCceEEEcCCcccccCC---CeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHH
Q psy16848 315 GQLHNMDIISGTLGKAFGNI---GGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDI 391 (514)
Q Consensus 315 ~~~~~~di~~~S~sK~lg~~---GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 391 (514)
+. .+|+++ ++|+++.. .|++++++++++.+....... +.+.++..++++.++|+.+.++. ..++++++
T Consensus 246 g~--~~D~~~--~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~--t~~~~~~~~aa~~a~L~~l~~~~---~~~~~~~~ 316 (401)
T PRK00854 246 GI--EADVTL--IGKALSGGFYPVSAVLSNSEVLGVLKPGQHGS--TFGGNPLACAVARAALKVLTEEG---MIENAAEM 316 (401)
T ss_pred CC--CCCEEE--ecccccCCccCeEEEEEcHHHHhcccCCCCCC--CCCcCHHHHHHHHHHHHHHHHcC---HHHHHHHH
Confidence 33 568874 57999652 288899999988776543333 33578999999999999875433 67888899
Q ss_pred HHHHHHHHHhCCCcc---ccCCCcEEEEEe-CCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHH
Q psy16848 392 VAYLRNELIQIGFPV---EHTPSHIIPIKI-GNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMI 467 (514)
Q Consensus 392 ~~~l~~~L~~~g~~~---~~~~~~~~~i~l-~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~i 467 (514)
.+++.+.|++++... ..+.+.++.+.+ ++.....++++.|+ ++||.+.+ .+.+.+|++++..++++++
T Consensus 317 ~~~l~~~L~~~~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~-~~GV~v~~-------~~~~~lR~~p~~~~t~e~i 388 (401)
T PRK00854 317 GAYFLEGLRSIRSNIVREVRGRGLMLAVELEPEAGGARQYCEALK-ERGLLAKD-------THDHTIRLAPPLVITREQV 388 (401)
T ss_pred HHHHHHHHHhhccCceEEEeccceEEEEEEecCchhHHHHHHHHH-HCCeEEec-------CCCCEEEEeCCcccCHHHH
Confidence 999999998875432 234566666655 33335678999996 88999863 1246899999989999999
Q ss_pred HHHHHHHHHHHH
Q psy16848 468 DKFVTDLLAVWK 479 (514)
Q Consensus 468 d~~~~~l~~~l~ 479 (514)
++++++|++++.
T Consensus 389 ~~~i~~l~~~l~ 400 (401)
T PRK00854 389 DWALEQIAKVLA 400 (401)
T ss_pred HHHHHHHHHHhh
Confidence 999999998763
No 50
>PRK08960 hypothetical protein; Provisional
Probab=99.97 E-value=1.9e-27 Score=243.72 Aligned_cols=342 Identities=15% Similarity=0.067 Sum_probs=233.4
Q ss_pred CCceeeecccCCC--CCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC----CCcEEEEeccccccc
Q psy16848 16 SNRVTCRLSSVQY--KVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ----KEAGLVFTSCYVAND 89 (514)
Q Consensus 16 ~g~~~~d~~~~~~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~~~i~~~sGt~a~~ 89 (514)
.+..+++++.+.. ..++.+.+++.+.+..... .+....|..++.+.+.+.+.+.+| .++.++++++++++.
T Consensus 30 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 106 (387)
T PRK08960 30 AGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHT---RYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALL 106 (387)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCC---ccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHH
Confidence 4556778765443 3467889988888764111 122233444555555555544333 234455555667777
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.++.++.. +||.|++++++|......++..|.+++.++... + +.|
T Consensus 107 ~~~~~~~~--~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~--------------------~~~------------ 151 (387)
T PRK08960 107 LASSLLVD--PGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGP-D--------------------SRY------------ 151 (387)
T ss_pred HHHHHhcC--CCCEEEEcCCCCcchHHHHHhcCCeEEEEecCc-c--------------------cCC------------
Confidence 77777765 999999999999988877766666554432210 0 000
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHH
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLT 249 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 249 (514)
..|.+.++
T Consensus 152 ------------------------------------------------------------------------~~d~~~l~ 159 (387)
T PRK08960 152 ------------------------------------------------------------------------QLTPALVE 159 (387)
T ss_pred ------------------------------------------------------------------------CCCHHHHH
Confidence 01233333
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcC
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGT 326 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S 326 (514)
+. .+++++++++++|+||||.+++ +++|+++|++||+++|+||+|.....+....++. .. .+..++++|
T Consensus 160 ~~----~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~---~~-~~~vi~~~S 231 (387)
T PRK08960 160 RH----WNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVL---EV-DDDAFVLNS 231 (387)
T ss_pred HH----hCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChh---hc-cCCEEEEee
Confidence 33 3455788999999999999999 5778888999999999999998433332221221 21 245789999
Q ss_pred CcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCC
Q psy16848 327 LGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIG 403 (514)
Q Consensus 327 ~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 403 (514)
|||.+|.+| ||+++++++++.+......+ +.+.+.+.+.++...++.....++.+.++.++++++.+.+.|++.+
T Consensus 232 ~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~--~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~ 309 (387)
T PRK08960 232 FSKYFGMTGWRLGWLVAPPAAVPELEKLAQNL--YISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELG 309 (387)
T ss_pred cccccCCcccEEEEEEcCHHHHHHHHHHHhhh--ccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999998778 99999999999887765544 3356778887777777532235667788889999999999999887
Q ss_pred Ccc-ccCCC-cEEEEEeCC-CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 404 FPV-EHTPS-HIIPIKIGN-PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 404 ~~~-~~~~~-~~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
+.+ ..+.+ .++++++++ ..+..++++.|++++||.+.|+..+......+++|++++. +.+++..++++|+++++
T Consensus 310 ~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~--~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 310 FGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ--SLPRLQEAVERIARGLR 386 (387)
T ss_pred CcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 764 23444 466777764 2456788888766789999999875543345799999994 67788888888877654
No 51
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.7e-27 Score=243.94 Aligned_cols=342 Identities=16% Similarity=0.171 Sum_probs=240.3
Q ss_pred eeeeccc--CCCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----CcEEEEeccc-cccccc
Q psy16848 19 VTCRLSS--VQYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EAGLVFTSCY-VANDST 91 (514)
Q Consensus 19 ~~~d~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~i~~~sGt-~a~~~~ 91 (514)
..+|++. .++..++.+.+++.+.+.... ...+....|..++.+++++.+++.+|. +..+++++|+ +++..+
T Consensus 28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~ 105 (389)
T PRK05957 28 GTISLGQGVVSYPPPPEAIEALNNFLANPE--NHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNA 105 (389)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHH
Confidence 3567754 334456788888888776422 223344557788899999999998874 3456666665 566666
Q ss_pred hhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhh
Q psy16848 92 LFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCE 171 (514)
Q Consensus 92 l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (514)
+.+++. +||.|+++.+.|......++..|.+++.++.++
T Consensus 106 ~~~~~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~--------------------------------------- 144 (389)
T PRK05957 106 ILAITD--PGDEIILNTPYYFNHEMAITMAGCQPILVPTDD--------------------------------------- 144 (389)
T ss_pred HHHhcC--CCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCC---------------------------------------
Confidence 666655 999999999888776655555555544332210
Q ss_pred hhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHH
Q psy16848 172 VSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQV 251 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~ 251 (514)
+. .-|.+.+++.
T Consensus 145 -----------------------~~---------------------------------------------~~d~~~l~~~ 156 (389)
T PRK05957 145 -----------------------NY---------------------------------------------QLQPEAIEQA 156 (389)
T ss_pred -----------------------CC---------------------------------------------CcCHHHHHHh
Confidence 00 0133444443
Q ss_pred HhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC-CCCCccccCCCccCceEEEcCC
Q psy16848 252 LENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE-HGAGIGERDGQLHNMDIISGTL 327 (514)
Q Consensus 252 l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~-~~~~~~~~~~~~~~~di~~~S~ 327 (514)
+ +++++++++++++||||.+++ +++|.++|+++|+++|+||+|.....+. ...+.....+ .....+++.||
T Consensus 157 i----~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~ 231 (389)
T PRK05957 157 I----TPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPG-SGNHTISLYSL 231 (389)
T ss_pred c----CcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCC-ccCcEEEEecc
Confidence 3 456899999999999999999 8999999999999999999999444332 1111111111 22467999999
Q ss_pred cccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-C
Q psy16848 328 GKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-G 403 (514)
Q Consensus 328 sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 403 (514)
||.+|.+| ||+++++++++.+....... ..+.+.+.+.++..+++.- ...+++.++.++++++.+.+.|++. +
T Consensus 232 SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~ 308 (389)
T PRK05957 232 SKAYGFASWRIGYMVIPIHLLEAIKKIQDTI--LICPPVVSQYAALGALQVG-KSYCQQHLPEIAQVRQILLKSLGQLQD 308 (389)
T ss_pred hhhccCccceeEEEecCHHHHHHHHHHHhhc--ccCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999778 99999999999988765443 3355667777777777521 2345667788899999999999887 4
Q ss_pred C-ccccCCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 404 F-PVEHTPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 404 ~-~~~~~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+ .+..+.++ +++++++...+..++++.|++++||.+.|+..+. ...++++|++++. .+++++++.+++|.+.++++
T Consensus 309 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~-~~~~~~iRis~~~-~~~~~l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 309 RCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFG-MKNGCYLRIAYGA-LQKATAKEGIERLVQGLKTI 386 (389)
T ss_pred CccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhC-CCCCCEEEEEEec-CCHHHHHHHHHHHHHHHHhh
Confidence 3 44455544 6678887666788999999767899999998753 2335799999973 57889999999998887764
No 52
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.97 E-value=5.1e-28 Score=250.12 Aligned_cols=352 Identities=15% Similarity=0.133 Sum_probs=241.2
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|++|+|+.++ ..++ ||+|.+++.+++++..... .. -..+...++.+++++++. .++++|++||++|+
T Consensus 80 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~---~~--~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAv 154 (459)
T PRK11522 80 QGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHS---QE--LLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESV 154 (459)
T ss_pred CCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccc---cc--cCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHH
Confidence 45556666432 1223 7999999999999753321 11 235777889999999864 45788899999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
+.|++....... ..++.++|.+++.||..
T Consensus 155 e~AlklAr~~t~-------------------------------------------~~gr~~ii~~~~~yHG~-------- 183 (459)
T PRK11522 155 EAALKLAKAYQS-------------------------------------------PRGKFTFIATSGAFHGK-------- 183 (459)
T ss_pred HHHHHHHHHHhc-------------------------------------------cCCCcEEEEecCCCCCC--------
Confidence 999964432100 00244566666666511
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
..|.....+.. .+...+......+..++++|.+.+
T Consensus 184 ------------------t~~~ls~~~~~---------------------------~~~~~~~~~~~~~~~~~~~d~~~l 218 (459)
T PRK11522 184 ------------------SLGALSATAKS---------------------------TFRKPFMPLLPGFRHVPFGNIEAM 218 (459)
T ss_pred ------------------cHHHhhhcCCc---------------------------ccccCCCCCCCCCcccCCCCHHHH
Confidence 00000000000 000000000112445677788888
Q ss_pred HHHHhhc--cCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCce
Q psy16848 249 TQVLENM--DVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMD 321 (514)
Q Consensus 249 ~~~l~~~--~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~d 321 (514)
++.+++. ..+++++++++++++..|.+.| +++++++|++||+++|+||+++ +|..|..+ ..+.+++ .+|
T Consensus 219 ~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~--a~e~~gv--~PD 294 (459)
T PRK11522 219 RTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMF--ACEHENV--QPD 294 (459)
T ss_pred HHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhh--hhhccCC--CCC
Confidence 8888653 2356889999999999999887 9999999999999999999997 44444311 2344555 789
Q ss_pred EEEcCCcccccCC---CeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q psy16848 322 IISGTLGKAFGNI---GGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNE 398 (514)
Q Consensus 322 i~~~S~sK~lg~~---GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 398 (514)
++ +++|.+|+. -|.+++++++.+.+......++.+++.+++.++++.++|+.+.++. ..++.+++.+++++.
T Consensus 295 iv--t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~---l~~~~~~~g~~l~~~ 369 (459)
T PRK11522 295 IL--CLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQN---LPAQAEQKGDYLLDG 369 (459)
T ss_pred EE--EechhhhCCCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcch---HHHHHHHHHHHHHHH
Confidence 98 999999862 2777778888776642211222345679999999999999986654 788899999999999
Q ss_pred HHhC--CCc-c---ccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHH
Q psy16848 399 LIQI--GFP-V---EHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVT 472 (514)
Q Consensus 399 L~~~--g~~-~---~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~ 472 (514)
|+++ +++ . +...|.++.+.+.+......+...|+ ++||.+.+.. .+.+.+|+.++..+|++|++++++
T Consensus 370 L~~l~~~~~~~i~~VrG~Gl~~giel~~~~~~~~i~~~l~-~~Gvl~~~~~-----~~~~~lr~~Ppl~~t~~~id~~l~ 443 (459)
T PRK11522 370 FRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMF-RQRVLVAGTL-----NNAKTIRIEPPLTLTIEQCEQVLK 443 (459)
T ss_pred HHHHHHhCCCceeeEEeceeEEEEEecCchHHHHHHHHHH-HCCeEEEecC-----CCCCEEEEECCccCCHHHHHHHHH
Confidence 8876 343 2 23467788898876544667888886 8999996431 235789999999999999999999
Q ss_pred HHHHHHHHcCC
Q psy16848 473 DLLAVWKSLDL 483 (514)
Q Consensus 473 ~l~~~l~~~~~ 483 (514)
+++++++++.+
T Consensus 444 ~l~~~l~~~~~ 454 (459)
T PRK11522 444 AARKALAAMRV 454 (459)
T ss_pred HHHHHHHHHHH
Confidence 99999987653
No 53
>PRK08068 transaminase; Reviewed
Probab=99.97 E-value=1.5e-27 Score=244.54 Aligned_cols=341 Identities=17% Similarity=0.146 Sum_probs=231.7
Q ss_pred CCceeeecccCCCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----CcEEEEecc-cccc
Q psy16848 16 SNRVTCRLSSVQYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EAGLVFTSC-YVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~i~~~sG-t~a~ 88 (514)
.+..++|+..++.. .+|.+.+++.+.+.... ...+....|..++.+++.+.+.+.+|. +..+++++| ++++
T Consensus 30 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l 107 (389)
T PRK08068 30 EGHDVINLGQGNPDQPTPEHIVEALQEAAENPA--NHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGL 107 (389)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHH
Confidence 34567888765543 25678888888776421 111212334555666666555544452 223445555 5666
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
..++.++.. +||.|+++.++|......++..|++++.++.++.+. |
T Consensus 108 ~~~~~~~~~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~---------------------~----------- 153 (389)
T PRK08068 108 VELPQCLMN--PGDTILVPDPGYPDYLSGVALARAQFETMPLIAENN---------------------F----------- 153 (389)
T ss_pred HHHHHHhCC--CCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccC---------------------C-----------
Confidence 677777765 999999999999888777777777666544310000 0
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
..|++.+
T Consensus 154 -------------------------------------------------------------------------~~d~~~l 160 (389)
T PRK08068 154 -------------------------------------------------------------------------LPDYTKI 160 (389)
T ss_pred -------------------------------------------------------------------------CCCHHHH
Confidence 0023333
Q ss_pred HHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccc-cccCCCCCCccccCCCccCceEEE
Q psy16848 249 TQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAV-GLYGEHGAGIGERDGQLHNMDIIS 324 (514)
Q Consensus 249 ~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~-g~~g~~~~~~~~~~~~~~~~di~~ 324 (514)
++.+ .++++++++++|+||||.+++ +++|.++|++|++++|+||+|.. .+.+....++....+ ..+..+++
T Consensus 161 ~~~~----~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~-~~~~~i~~ 235 (389)
T PRK08068 161 PEEV----AEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPG-AKDVGIEL 235 (389)
T ss_pred HHhc----cccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCC-ccCCEEEE
Confidence 3333 345789999999999999999 57888899999999999999983 332211112222111 12467899
Q ss_pred cCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy16848 325 GTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQ 401 (514)
Q Consensus 325 ~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 401 (514)
+||||.+|.+| ||+++++++++.+......+ ..+.++..+.++..++... ..++++.++.++++++.+.+.|++
T Consensus 236 ~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~~--~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~ 312 (389)
T PRK08068 236 YTLSKTFNMAGWRVAFAVGNESVIEAINLLQDHL--FVSLFGAIQDAAIEALLSD-QSCVAELVARYESRRNAFISACRE 312 (389)
T ss_pred ecchhccCCccceeEeEecCHHHHHHHHHHHhhc--cCCCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998778 99999999999988766554 3345555666666666422 355678899999999999999999
Q ss_pred CCCccccCCCcE-EEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 402 IGFPVEHTPSHI-IPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 402 ~g~~~~~~~~~~-~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
.|+.+..+.+++ +++.+++..+..++.+.|++++||.+.++..+. ..+++++|++++ .+++.+..++++|++
T Consensus 313 ~g~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~-~~~~~~iRi~~~--~~~~~l~~al~~l~~ 385 (389)
T PRK08068 313 IGWEVDAPKGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFG-EHGEGYVRVGLL--TDEERLREAVERIGK 385 (389)
T ss_pred CCCcccCCCeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHhC-ccCCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 888777777764 578887655678999999745799999988643 334679999997 456777777777654
No 54
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.97 E-value=7e-28 Score=247.40 Aligned_cols=347 Identities=15% Similarity=0.124 Sum_probs=236.9
Q ss_pred CCceeeecccC---CCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC--CcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK--EAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~i~~~sGt~a~ 88 (514)
+|+.|+||.++ ..+ .||+|.+++.+|+++..... .. -..+...++.+++++.+.. ++++|++||++|+
T Consensus 73 dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~---~~--~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~ 147 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHS---QE--LLDPLRALLAKTLAALTPGKLKYSFFCNSGTESV 147 (442)
T ss_pred CCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcc---cc--cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHH
Confidence 45556665332 112 38999999999999754321 11 2257778899999998743 5678889999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
+.|++..... ...++++++|.+++.||..
T Consensus 148 e~AlklAr~~-------------------------------------------t~~~gr~~ii~~~~~yHG~-------- 176 (442)
T TIGR03372 148 EAALKLAKAY-------------------------------------------QSPRGKFTFIAASGAFHGK-------- 176 (442)
T ss_pred HHHHHHHHHH-------------------------------------------HhhcCCcEEEEECCCccCC--------
Confidence 9999644320 0012345666666666511
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
..|....++.. .+...+......+..+|.+|.+.+
T Consensus 177 ------------------t~~~ls~t~~~---------------------------~~~~~~~p~~~~~~~~p~~d~~~~ 211 (442)
T TIGR03372 177 ------------------SLGALSATAKP---------------------------AFRKPFMPLLPGFHHVAFGDIEAM 211 (442)
T ss_pred ------------------CHHHhhccCCc---------------------------ccCCCCCCCCCCCEEeCCCCHHHH
Confidence 00000000000 000000001123466777888888
Q ss_pred HHHHhhc--cCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCce
Q psy16848 249 TQVLENM--DVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMD 321 (514)
Q Consensus 249 ~~~l~~~--~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~d 321 (514)
++.+++. ..+++++|+++++++..|...| +++++++|++||+++|+||+++ +|..|..+ ..+.+++ .+|
T Consensus 212 ~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~--a~e~~gv--~PD 287 (442)
T TIGR03372 212 LKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMF--ACEHEGV--QPD 287 (442)
T ss_pred HHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccch--hhhhcCC--CCC
Confidence 8887642 2356899999999999999888 9999999999999999999997 55554321 2334554 799
Q ss_pred EEEcCCcccccC---CCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q psy16848 322 IISGTLGKAFGN---IGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNE 398 (514)
Q Consensus 322 i~~~S~sK~lg~---~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 398 (514)
++ +++|.+|+ +.|.+++++++.+.+......+..+++.+++.++++.++|+.+.++. +.++.+++.+++++.
T Consensus 288 iv--t~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~ 362 (442)
T TIGR03372 288 IL--CLAKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKN---LPAQAAIKGDFLLDG 362 (442)
T ss_pred ee--eehhhhcCCcccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHH
Confidence 99 79999975 12777788888887743221222345779999999999999986655 677788888888888
Q ss_pred HHhC--CCc-c---ccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHH
Q psy16848 399 LIQI--GFP-V---EHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVT 472 (514)
Q Consensus 399 L~~~--g~~-~---~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~ 472 (514)
|+++ .++ . +...|.++.+++.+......+.+.|+ ++||++.+... +.+.+|+.++..+|++|+|++++
T Consensus 363 L~~l~~~~~~~i~~vRG~Gl~~giel~~~~~~~~i~~~l~-~~Gvl~~~~~~-----~~~~lr~~Ppl~~t~~~id~~~~ 436 (442)
T TIGR03372 363 FQQLAAEYPDLIIEARGKGLLMAIEFRDNEIGYAFAKELF-QQNILVAGTLN-----NAKSIRIEPPLTITIEQCALVIK 436 (442)
T ss_pred HHHHHHhCCCceEEEecceEEEEEEeCChHHHHHHHHHHH-HCCcEEeecCC-----CCCEEEEECCcccCHHHHHHHHH
Confidence 8775 232 1 24567788899876545678889996 89999964321 24689999999999999999999
Q ss_pred HHHHHH
Q psy16848 473 DLLAVW 478 (514)
Q Consensus 473 ~l~~~l 478 (514)
++++++
T Consensus 437 ~l~~~~ 442 (442)
T TIGR03372 437 AAKDAL 442 (442)
T ss_pred HHHHhC
Confidence 998753
No 55
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=1.5e-27 Score=246.07 Aligned_cols=342 Identities=16% Similarity=0.151 Sum_probs=239.2
Q ss_pred eeeecccCCCCCChhHHHHHHHHHHHhCCCCCCcCc--ccCcchHHHHHHHHHHhHcCC-C-cE-EEEeccccccccchh
Q psy16848 19 VTCRLSSVQYKVPKGGRKCLGEALEKFGTGAGGTRN--ISGNSLFHEKLEEDVAKLHQK-E-AG-LVFTSCYVANDSTLF 93 (514)
Q Consensus 19 ~~~d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~~~-~-~~-i~~~sGt~a~~~~l~ 93 (514)
.|.|.++... -++.+.+++.+.+..+..+...... .....+..+++++.+++++|. + +. ++++|+|+++..++.
T Consensus 25 iYld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~ 103 (406)
T PRK09295 25 AYLDSAASAQ-KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVAN 103 (406)
T ss_pred EEEeCccccc-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHH
Confidence 5566655443 3567889998888764322211111 111346678899999999986 2 34 444555677666666
Q ss_pred hcc--ccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhh
Q psy16848 94 TLG--KMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCE 171 (514)
Q Consensus 94 ~l~--~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (514)
++. ...+||.|++++.+|++....+.
T Consensus 104 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~---------------------------------------------------- 131 (406)
T PRK09295 104 SWGNSNVRAGDNIIISEMEHHANIVPWQ---------------------------------------------------- 131 (406)
T ss_pred HhhhhcCCCcCEEEECcchhhHHHHHHH----------------------------------------------------
Confidence 542 13499999999999988653211
Q ss_pred hhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-CChhHHHH
Q psy16848 172 VSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-NDVNHLTQ 250 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~ 250 (514)
......|++++.++. .+.....+
T Consensus 132 --------------------------------------------------------~~~~~~g~~v~~v~~~~~~~~d~~ 155 (406)
T PRK09295 132 --------------------------------------------------------MLCARVGAELRVIPLNPDGTLQLE 155 (406)
T ss_pred --------------------------------------------------------HHHHHcCcEEEEEecCCCCCCCHH
Confidence 111223444444441 11112233
Q ss_pred HHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccc
Q psy16848 251 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKA 330 (514)
Q Consensus 251 ~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~ 330 (514)
.+.+..+++++++++++++||||.++|+++|.++|+++|+++++|++|+.|.. +......++|++++|+||.
T Consensus 156 ~l~~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~--------~~~~~~~~~D~~~~s~~K~ 227 (406)
T PRK09295 156 TLPALFDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHH--------PVDVQALDCDFYVFSGHKL 227 (406)
T ss_pred HHHHhcCCCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCcc--------ccCchhcCCCEEEeehhhc
Confidence 33444455789999999999999999999999999999999999999987653 1111134789999999998
Q ss_pred ccCCC-eEEEecHHHHHHHHhhcCce-------------------Ee-ccCCcHHHHHHHHHHHHHhhhchHHHHHHHHH
Q psy16848 331 FGNIG-GYIVGTKNFIDTIRSYAAGF-------------------IF-TTSLPPTVLAGAREAIRILSSQEGVELRAKHQ 389 (514)
Q Consensus 331 lg~~G-G~l~~~~~~~~~l~~~~~~~-------------------~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 389 (514)
+|+.| |+++.++++++.+.....+. .+ ..+.+.....++.++++++.+.+++++.++.+
T Consensus 228 ~gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~ 307 (406)
T PRK09295 228 YGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQ 307 (406)
T ss_pred cCCCCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 89888 99999998877664321111 01 12456777888899999887667888999999
Q ss_pred HHHHHHHHHHHhC-CCccccC--CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCC-----CCCcEEEEEeCCC
Q psy16848 390 DIVAYLRNELIQI-GFPVEHT--PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVP-----VGEEKIRLAPTPF 461 (514)
Q Consensus 390 ~~~~~l~~~L~~~-g~~~~~~--~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~-----~~~~~iRl~~~~~ 461 (514)
++.+++.+.|++. ++.+..+ ..+++.+.++. ....++.+.| +++||.++.+..|..+ ..+..+|+|++.+
T Consensus 308 ~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~-~~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~y 385 (406)
T PRK09295 308 NLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGK-HHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMY 385 (406)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECC-cCHHHHHHHH-HhCCeEEeccccchHHHHHHHCCCCEEEEEccCC
Confidence 9999999999887 6666543 35677777764 3456787877 6999999988765422 1235899999999
Q ss_pred CCHHHHHHHHHHHHHHHH
Q psy16848 462 HTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 462 ~t~e~id~~~~~l~~~l~ 479 (514)
+|++|+|+++++|+++.+
T Consensus 386 nt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 386 NTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 999999999999998754
No 56
>PLN00144 acetylornithine transaminase
Probab=99.96 E-value=7.5e-28 Score=244.88 Aligned_cols=352 Identities=16% Similarity=0.146 Sum_probs=237.5
Q ss_pred cCCceeeecccCC---CCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccc
Q psy16848 15 KSNRVTCRLSSVQ---YKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAND 89 (514)
Q Consensus 15 ~~g~~~~d~~~~~---~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~ 89 (514)
.+|++|+||.+.- -++ ||++.+++.+++.+.... + . . ...+...++.+++++..+.++++|++||++|++
T Consensus 12 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~-~-~--~-~~~~~~~~la~~l~~~~~~~~v~f~~sGseA~e 86 (382)
T PLN00144 12 VEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHV-S-N--V-YHTIPQVELAKRLVASSFADRVFFCNSGTEANE 86 (382)
T ss_pred CCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCc-c-c--c-ccCHHHHHHHHHHHhcCCCCeEEEeCCcHHHHH
Confidence 4788889985432 233 899999999999974332 1 1 1 124667888999998877778899999999999
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.|++...... +.+-. .. . ......+++++.+++.||...
T Consensus 87 ~AlklAr~~~----------------------~~~~~--~~--~-------~~~~~~r~~ii~~~~~yHG~t-------- 125 (382)
T PLN00144 87 AAIKFARKYQ----------------------RVRAP--DK--K-------DPAASSATEFVSFSNSFHGRT-------- 125 (382)
T ss_pred HHHHHHHHHH----------------------hccCC--CC--c-------cccccccceEEEECCCccccc--------
Confidence 9996543200 00000 00 0 000011578999999997211
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHH
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLT 249 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 249 (514)
.|.....+. + .+...+...-..+..++++|.+.++
T Consensus 126 ------------------~~~~s~~~~---------------------~------~~~~~~~~~~~~~~~~~~~d~~~l~ 160 (382)
T PLN00144 126 ------------------LGALALTSK---------------------E------QYRTPFEPLMPGVTFVEYGNLEAAR 160 (382)
T ss_pred ------------------HHHHhcCCC---------------------c------cccccCCCCCCCeEEeCCCCHHHHH
Confidence 000000000 0 0000000011235677888888888
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCceEEE
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMDIIS 324 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~di~~ 324 (514)
+.+. ..++++|++++.+||.|...+ +++|+++|++||+++|+||+++ +|..|..+ ..+..++ .+|++
T Consensus 161 ~~~~---~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~--~~~~~~~--~PDi~- 232 (382)
T PLN00144 161 KLIQ---KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLW--AHEAYGV--EPDIM- 232 (382)
T ss_pred HhcC---CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHh--hhhhcCC--CCCEE-
Confidence 8774 246889999999999665544 8999999999999999999998 55554321 1123444 68877
Q ss_pred cCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy16848 325 GTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQ 401 (514)
Q Consensus 325 ~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 401 (514)
||+|.+++ | |++++++++.+.+....... +...+++.++++.++|+.+.+.. ..++++++.+++.+.|++
T Consensus 233 -t~sK~l~~-G~pig~v~~~~~~~~~~~~~~~~~--T~~~~pl~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~ 305 (382)
T PLN00144 233 -TLAKPLAG-GLPIGAVLVTEKVASAINPGDHGS--TFAGGPLVCNAALAVLDKISKPG---FLASVAKKGEYLRELLRR 305 (382)
T ss_pred -EecccccC-CcceEEEEEcHHHHhccCCCCCCC--CCCCCHHHHHHHHHHHHHHhhch---HHHHHHHHHHHHHHHHHH
Confidence 99999986 5 99999999998886544333 55789999999999999886555 555666666666665554
Q ss_pred C--CCc---cccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 402 I--GFP---VEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 402 ~--g~~---~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
+ +.+ -+...|.++++++.. ....+...++ ++||.+.++.. .+.+|++++..++++++++++++|++
T Consensus 306 ~~~~~~~~~~vrg~G~~~~l~l~~--~~~~~~~~~~-~~Gv~i~~~~~------~~~lrl~p~~~~~~~~i~~~~~~l~~ 376 (382)
T PLN00144 306 KLGGNPHVKEVRGVGLLVGIQLDV--PAGPLVDACR-DSGLLVLTAGK------GDVVRLVPPLVISEAELEQAVEILAD 376 (382)
T ss_pred HHhhCCCceeeecCceEEEEEecC--ccHHHHHHHH-HCCeEEeecCC------CCEEEEeCCCccCHHHHHHHHHHHHH
Confidence 3 222 123467788888842 3567888885 99999976421 36899999988999999999999999
Q ss_pred HHHHc
Q psy16848 477 VWKSL 481 (514)
Q Consensus 477 ~l~~~ 481 (514)
++.++
T Consensus 377 ~l~~~ 381 (382)
T PLN00144 377 CLPAL 381 (382)
T ss_pred HHHhc
Confidence 98764
No 57
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.96 E-value=9.6e-29 Score=251.35 Aligned_cols=331 Identities=24% Similarity=0.266 Sum_probs=237.2
Q ss_pred eeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--------CCcEEEEeccccc
Q psy16848 19 VTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--------KEAGLVFTSCYVA 87 (514)
Q Consensus 19 ~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--------~~~~i~~~sGt~a 87 (514)
.+||++++++.. +|.+.+++.+..+ +.........|+......++++.++++++ .+..+++++|+.+
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~ 79 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIR--GAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA 79 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHH--HHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHH--HhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence 468998888774 4555555555443 00011222334445567888888888887 3336888899887
Q ss_pred cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeecc-------CCChHHHHHHHHhcccCCCcEEEeecccccc
Q psy16848 88 NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYR-------HNDVNHLTQVLENMDVKIPKLVAFETVHSMT 160 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 160 (514)
...++..+.+..+||.|+++.+.|......++..|.+++.++ +.|+++|+
T Consensus 80 ~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~----------------------- 136 (363)
T PF00155_consen 80 ALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALE----------------------- 136 (363)
T ss_dssp HHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHH-----------------------
T ss_pred chhhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccc-----------------------
Confidence 655554443234899999999999999999999999888776 33444444
Q ss_pred CCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEe
Q psy16848 161 GAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIY 240 (514)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v 240 (514)
T Consensus 137 -------------------------------------------------------------------------------- 136 (363)
T PF00155_consen 137 -------------------------------------------------------------------------------- 136 (363)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCChhHHHHHHhhccCC--CceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCC--cccc
Q psy16848 241 RHNDVNHLTQVLENMDVK--IPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAG--IGER 313 (514)
Q Consensus 241 ~~~d~~~l~~~l~~~~~~--~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~--~~~~ 313 (514)
+.+++...+ +++++++++|+||||..++ +++|.++|++||+++|+||+|.....+..... ....
T Consensus 137 ---------~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 207 (363)
T PF00155_consen 137 ---------EALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLL 207 (363)
T ss_dssp ---------HHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHH
T ss_pred ---------cccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccc
Confidence 444443222 3578999999999999999 56666669999999999999997665533110 1111
Q ss_pred CCCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhh--chHHHHHHHH
Q psy16848 314 DGQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSS--QEGVELRAKH 388 (514)
Q Consensus 314 ~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~ 388 (514)
. ....++++.|+||.+|.+| ||+++++++++.++.....+ ..+...+.++...+..... .++++.++++
T Consensus 208 ~--~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l 281 (363)
T PF00155_consen 208 D--EDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIERLRRFQRSG----LSSSPMQAAAAAALSDPELVEKWLEELRERL 281 (363)
T ss_dssp T--TTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHHHHHHHHHHT----TSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c--ccccceeeeeccccccccccccccccchhhhhhhhhhccccc----cccchhhHHHHHhhhcccccccccccchhhH
Confidence 1 1123799999999999889 99999999999988766544 2366666666666664432 2778899999
Q ss_pred HHHHHHHHHHHHhCCCccccCCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHH
Q psy16848 389 QDIVAYLRNELIQIGFPVEHTPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMI 467 (514)
Q Consensus 389 ~~~~~~l~~~L~~~g~~~~~~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~i 467 (514)
+++++++.+.|++.++.+..+.++ ++++.++.. +..++.+.|+++.||.+.|+..+.. .+++|+++ ...+++++
T Consensus 282 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gi~v~pg~~~~~---~~~iRi~~-a~~~~e~~ 356 (363)
T PF00155_consen 282 RENRDLLREALEEIGITVLPPEAGFFLWVRLDPN-DAEELAQELLEEYGILVRPGSYFGV---PGYIRISL-ASHSEEDL 356 (363)
T ss_dssp HHHHHHHHHHHHHTTSEEEHHSBSSEEEEEESHH-HHHHHHHHHHHHHTEEEEEGGGGTS---TTEEEEEG-GCSCHHHH
T ss_pred HHHHHHHHHHHHHhhhheeeccCccEEEEEcccc-hHHHHHHHHHHhCCEEEEecCCCCC---CCEEEEEe-ccCCHHHH
Confidence 999999999999999988776665 444555432 5688999997444999999998665 67999999 46899999
Q ss_pred HHHHHHH
Q psy16848 468 DKFVTDL 474 (514)
Q Consensus 468 d~~~~~l 474 (514)
++++++|
T Consensus 357 ~~~~~~l 363 (363)
T PF00155_consen 357 EEALERL 363 (363)
T ss_dssp HHHHHHH
T ss_pred HHHHhhC
Confidence 9999876
No 58
>PRK08912 hypothetical protein; Provisional
Probab=99.96 E-value=2.1e-27 Score=243.33 Aligned_cols=342 Identities=18% Similarity=0.219 Sum_probs=237.1
Q ss_pred ceeeecccCCCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----C-cEEEEecccccccc
Q psy16848 18 RVTCRLSSVQYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----E-AGLVFTSCYVANDS 90 (514)
Q Consensus 18 ~~~~d~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~-~~i~~~sGt~a~~~ 90 (514)
...+|+..+..- .++.+.+++.+.+.. + ...+....|..++.+.+.+.+.+.+|. + ..++++++++++..
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~-~--~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 102 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADALLD-G--SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAA 102 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhc-C--CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHH
Confidence 356888653322 356777777776653 1 122333345566666777666665552 2 34555556677777
Q ss_pred chhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHh
Q psy16848 91 TLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 91 ~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
++.++.. +||.|+++.+.|......++..|.+++.++... +
T Consensus 103 ~~~~~~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~------------------------------------ 143 (387)
T PRK08912 103 ALLALVE--PGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-P------------------------------------ 143 (387)
T ss_pred HHHHhcC--CCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-c------------------------------------
Confidence 7777765 999999999999888877777776665443210 0
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQ 250 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 250 (514)
+. ..|.+.+++
T Consensus 144 ------------------------~~---------------------------------------------~~~~~~l~~ 154 (387)
T PRK08912 144 ------------------------HW---------------------------------------------RLPRAALAA 154 (387)
T ss_pred ------------------------cC---------------------------------------------cCCHHHHHH
Confidence 00 002333333
Q ss_pred HHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC-CCCCccccCCCccCceEEEcC
Q psy16848 251 VLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE-HGAGIGERDGQLHNMDIISGT 326 (514)
Q Consensus 251 ~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~-~~~~~~~~~~~~~~~di~~~S 326 (514)
.+ .++++++++++|+||||.+++ +++|.++|++|++++|+||+|.....+. ...++....+ ..+.+++++|
T Consensus 155 ~~----~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~~i~~~S 229 (387)
T PRK08912 155 AF----SPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPG-MRERTVKIGS 229 (387)
T ss_pred Hh----CccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCC-ccCceEEEee
Confidence 33 346789999999999999999 6789999999999999999998443322 2222222222 1357899999
Q ss_pred CcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCC
Q psy16848 327 LGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIG 403 (514)
Q Consensus 327 ~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 403 (514)
|||.+|.+| ||+++++++++.+........+ +.++..+.++...+... ..++++.+++++++++++.+.|++.|
T Consensus 230 ~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~--~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g 306 (387)
T PRK08912 230 AGKIFSLTGWKVGFVCAAPPLLRVLAKAHQFLTF--TTPPNLQAAVAYGLGKP-DDYFEGMRADLARSRDRLAAGLRRIG 306 (387)
T ss_pred chhhccCcCceeEEEecCHHHHHHHHHHHhhccc--cCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999768 9999999999988766544322 44555666666666422 34567788999999999999999988
Q ss_pred CccccCCCc-EEEEEeCC---CccHHHHHHHHHHhCCeEEecccCCCC-CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 404 FPVEHTPSH-IIPIKIGN---PALNTKICDMLLKEKGHYVQPINYPTV-PVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 404 ~~~~~~~~~-~~~i~l~~---~~~~~~~~~~Ll~~~GI~v~~~~~~~~-~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
+.+..+.++ ++++.++. ..+..++++.+++++||.+.|+..+.. ....+++|++++. .++++++++++|++++
T Consensus 307 ~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~--~~~~l~~~l~rl~~~l 384 (387)
T PRK08912 307 FPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK--RDATLDEAVERLAAAR 384 (387)
T ss_pred CcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC--CHHHHHHHHHHHHHHH
Confidence 887777655 56677764 245678999986678999999886532 2346799999994 5889999999999877
Q ss_pred HH
Q psy16848 479 KS 480 (514)
Q Consensus 479 ~~ 480 (514)
++
T Consensus 385 ~~ 386 (387)
T PRK08912 385 RR 386 (387)
T ss_pred hc
Confidence 54
No 59
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=9.9e-28 Score=245.01 Aligned_cols=331 Identities=21% Similarity=0.231 Sum_probs=238.6
Q ss_pred cCCceeeecccCC---CCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccc
Q psy16848 15 KSNRVTCRLSSVQ---YKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAND 89 (514)
Q Consensus 15 ~~g~~~~d~~~~~---~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~ 89 (514)
.+|++++||.++. |+| ||++.+++.+++++.... +. ....+...++++++.+..+.+.+++++||++|+.
T Consensus 26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~--~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~ 100 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHV---SN--LFTNSLQEEVASLLAENSAGDLVFFCNSGAEANE 100 (377)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcccc---cc--ccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHH
Confidence 4788999998776 776 799999999999975321 11 1235777888888888877778899999999999
Q ss_pred cchhhccc-cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 90 STLFTLGK-MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 90 ~~l~~l~~-~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
.++..... .++++.|..+..+|.++..+++..+........
T Consensus 101 ~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~-------------------------------------- 142 (377)
T PRK02936 101 AALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGF-------------------------------------- 142 (377)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccC--------------------------------------
Confidence 99985432 234456777788888887666554422110000
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
......+..++.+|.+.+
T Consensus 143 --------------------------------------------------------------~~~~~~~~~~~~~d~~~l 160 (377)
T PRK02936 143 --------------------------------------------------------------GPLLPGFTHVPFNDIKAL 160 (377)
T ss_pred --------------------------------------------------------------CCCCCCceEeCCCCHHHH
Confidence 000012344566677777
Q ss_pred HHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCcc-ccCCCccCceE
Q psy16848 249 TQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIG-ERDGQLHNMDI 322 (514)
Q Consensus 249 ~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~-~~~~~~~~~di 322 (514)
++.+. +++++++++++++++|...+ +++|+++|++||+++|+||+|+ +|..| .++. ...+. .+|+
T Consensus 161 ~~~~~----~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g---~~~~~~~~~~--~~di 231 (377)
T PRK02936 161 KEVMN----EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG---TLFAYEQFGL--DPDI 231 (377)
T ss_pred HHhcc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhHHHhhCC--CCcE
Confidence 76663 45899999999999988754 8999999999999999999997 43333 2221 22333 5677
Q ss_pred EEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy16848 323 ISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNEL 399 (514)
Q Consensus 323 ~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 399 (514)
+ ++||.+++ | |++++++++.+.+....... +.+.+++.++++.++++.+..+ +.+++++++.+++.+.|
T Consensus 232 ~--t~sK~l~~-G~~ig~v~~~~~~~~~~~~~~~~~--t~~~~~~~~aaa~a~l~~~~~~---~~~~~~~~~~~~l~~~L 303 (377)
T PRK02936 232 V--TVAKGLGN-GIPVGAMIGKKELGTAFGPGSHGS--TFGGNPLAMAAAKEVLQVIKQP---SFLEEVQEKGEYFLQKL 303 (377)
T ss_pred E--EEcccccC-CCccEEEEEcHHHHhhccCCCCCC--CCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHH
Confidence 6 89999985 5 99999999988886544333 4467999999999999977433 35677778888888887
Q ss_pred HhC--CCccc---cCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHH
Q psy16848 400 IQI--GFPVE---HTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDL 474 (514)
Q Consensus 400 ~~~--g~~~~---~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l 474 (514)
++. +++.. .+.+.++++.+++. ...+.+.|. ++||.+.+. +.+++|++++..++++++++++++|
T Consensus 304 ~~~~~~~~~~~~v~~~g~~~~i~~~~~--~~~~~~~l~-~~gv~v~~~-------g~~~lRi~p~~~~~~~~i~~~i~~l 373 (377)
T PRK02936 304 QEELEHLECVKNIRGKGLMIGIECTEE--VAPVIEQLR-EEGLLVLSA-------GPNVIRLLPPLVVTKEELDQAVYLL 373 (377)
T ss_pred HHHHhhCCcEEeEeecceEEEEEecch--HHHHHHHHH-HCCeEEecC-------CCCEEEEECCcccCHHHHHHHHHHH
Confidence 763 33322 34566888888653 667888884 899998752 3468999998889999999999999
Q ss_pred HHH
Q psy16848 475 LAV 477 (514)
Q Consensus 475 ~~~ 477 (514)
+++
T Consensus 374 ~~~ 376 (377)
T PRK02936 374 KKV 376 (377)
T ss_pred HHh
Confidence 875
No 60
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.8e-27 Score=242.86 Aligned_cols=341 Identities=14% Similarity=0.139 Sum_probs=229.6
Q ss_pred CCceeeecccCCCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----CcEEEEec-ccccc
Q psy16848 16 SNRVTCRLSSVQYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EAGLVFTS-CYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~i~~~s-Gt~a~ 88 (514)
.|...+|+..++... ++++.+++.+.+... ....+....|..++.+++.+.+.+.+|. +..+++++ +++++
T Consensus 33 ~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al 110 (394)
T PRK05942 33 QGLDLIDLGMGNPDGAAPQPVIEAAIAALADP--QNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGL 110 (394)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCC--CCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHH
Confidence 455688996544332 345777776666431 1112222334555666666666555452 23355554 45677
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
..++.+++. +||.|+++.++|......++..|.+++.++... + +
T Consensus 111 ~~~~~~~~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~-~--------------------~------------- 154 (394)
T PRK05942 111 THLALAYVN--PGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKP-E--------------------N------------- 154 (394)
T ss_pred HHHHHHhCC--CCCEEEEcCCCCcchHHHHHHcCCEEEEeecCC-c--------------------c-------------
Confidence 777777765 999999999999888766666666655443210 0 0
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
+. ..|.+.+
T Consensus 155 --------------------------~~---------------------------------------------~~d~~~l 163 (394)
T PRK05942 155 --------------------------DW---------------------------------------------LIDLSSI 163 (394)
T ss_pred --------------------------CC---------------------------------------------ccCHHHH
Confidence 00 0033333
Q ss_pred HHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCccCceEEE
Q psy16848 249 TQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLHNMDIIS 324 (514)
Q Consensus 249 ~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~~di~~ 324 (514)
++.+ .++++++++++|+||||.+++ +++|.++|+++|+++|+||+|..... +....++....+ ..+.++++
T Consensus 164 ~~~~----~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~-~~~~~i~~ 238 (394)
T PRK05942 164 PEEV----AQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPG-AKDIGVEF 238 (394)
T ss_pred HHhc----cccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCC-ccccEEEE
Confidence 3333 356899999999999999999 78999999999999999999984443 222212222221 12456888
Q ss_pred cCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy16848 325 GTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQ 401 (514)
Q Consensus 325 ~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 401 (514)
+||||.+|.+| ||+++++++++.+....... ..+.+...+.++..+++.. ..++++.+++++++++++.+.|++
T Consensus 239 ~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~~~~~--~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~ 315 (394)
T PRK05942 239 HTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKTNL--DYGIFSALQKAAETALQLP-DSYLQQVQERYRTRRDFLIQGLGE 315 (394)
T ss_pred ecchhccCChhhheeeeecCHHHHHHHHHHHhhc--ccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998778 99999999999988765433 2255667777777777643 456778899999999999999998
Q ss_pred CCCccccCCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 402 IGFPVEHTPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 402 ~g~~~~~~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
.++.+..+.++ ++++.++...+..++...+++++||.+.++..+. ..+.+++|++++ .+.+.+.+.++++.+
T Consensus 316 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~-~~~~~~iRis~~--~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 316 LGWNIPPTKATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFG-EGGEGYVRISLI--ADCDRLGEALDRLKQ 388 (394)
T ss_pred CCCeecCCCeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhC-cCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 88877667666 6778887655567788777678999999988643 234679999997 344555555555543
No 61
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.96 E-value=1.3e-27 Score=245.58 Aligned_cols=341 Identities=19% Similarity=0.204 Sum_probs=236.9
Q ss_pred eeeecccCCCCCChhHHHHHHHHH-HHhCCCCCCcCcccCcchHHHHHHH----HHHhHcCCCcEEE-Eeccccccccch
Q psy16848 19 VTCRLSSVQYKVPKGGRKCLGEAL-EKFGTGAGGTRNISGNSLFHEKLEE----DVAKLHQKEAGLV-FTSCYVANDSTL 92 (514)
Q Consensus 19 ~~~d~~~~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~la~~~~~~~~i~-~~sGt~a~~~~l 92 (514)
.+-.++|++|+ +|.+++++...+ .+|+.+++++++..| .+.+.++|+ ++++++|.+++++ ++||+.|+..++
T Consensus 30 ~~~l~~sen~~-~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l 107 (416)
T PRK13034 30 HLELIASENFT-SPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVY 107 (416)
T ss_pred CeeecccccCC-CHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHH
Confidence 34456888998 799999999995 899998899999888 578999998 9999999999955 589999999999
Q ss_pred hhccccCCCceEEecCccchhh-hhhhhcC--CCCe--eeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchh
Q psy16848 93 FTLGKMIPGLHYISDAGNHASM-IQGIRNS--SAPK--IIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK 167 (514)
Q Consensus 93 ~~l~~~~~gd~v~~~~~~h~~~-~~~~~~~--~~~~--~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (514)
.++.+ |||+|+++...|.+. ..+++.. +... ..+.++
T Consensus 108 ~al~~--~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------------------------------------ 149 (416)
T PRK13034 108 LALLK--PGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVD------------------------------------ 149 (416)
T ss_pred HHhcC--CCCEEEEcCccceeeeecCCcceeccceeeeEEcccc------------------------------------
Confidence 99976 999999999999873 3233221 1100 111110
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH 247 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~ 247 (514)
.+ ....|.+.
T Consensus 150 ---------------------------------------------------------------------~~-~~~~d~~~ 159 (416)
T PRK13034 150 ---------------------------------------------------------------------RL-TGLIDYDE 159 (416)
T ss_pred ---------------------------------------------------------------------cc-cCCcCHHH
Confidence 00 00135666
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCC
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTL 327 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~ 327 (514)
+++.++.. ++++|+++.+. .|...|+++|.++|++||+++|+|++|++|..+.. . ..+....+|++++|+
T Consensus 160 le~~l~~~---~~klVi~~~~~--~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g---~--~~~~~~~~Di~~~s~ 229 (416)
T PRK13034 160 VEELAKEH---KPKLIIAGFSA--YPRELDFARFREIADEVGALLMVDMAHIAGLVAAG---E--HPNPFPHAHVVTTTT 229 (416)
T ss_pred HHHHHhhc---CCeEEEECCCc--cccccCHHHHHHHHHHcCCEEEEeCcccccCcccC---C--CCCCCCCceEEEEeC
Confidence 66666432 36788775432 57888999999999999999999999998877532 1 111113589999999
Q ss_pred cccc-cCCCeEEEecH-HHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCc
Q psy16848 328 GKAF-GNIGGYIVGTK-NFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFP 405 (514)
Q Consensus 328 sK~l-g~~GG~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 405 (514)
||++ |+.||++++++ .+.+.++........+...++..++++.+.++.. .....+.+++++++.+++++.|++.|++
T Consensus 230 ~K~l~g~~GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~-~~~~~~~~~~l~~~a~~l~~~L~~~G~~ 308 (416)
T PRK13034 230 HKTLRGPRGGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEAL-QPEFKTYAKQVIANAQALAEVLKERGYD 308 (416)
T ss_pred cccCCCCCCeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHh-ChhHHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 9999 55678877754 4445444322211011122333333333444333 2344567899999999999999999988
Q ss_pred ccc--CCCcEEEEEeCCCc-cHHHHHHHHHHhCCeEEecccCCC---CCCCCcEEEEEeCC----CCCHHHHHHHHHHHH
Q psy16848 406 VEH--TPSHIIPIKIGNPA-LNTKICDMLLKEKGHYVQPINYPT---VPVGEEKIRLAPTP----FHTREMIDKFVTDLL 475 (514)
Q Consensus 406 ~~~--~~~~~~~i~l~~~~-~~~~~~~~Ll~~~GI~v~~~~~~~---~~~~~~~iRl~~~~----~~t~e~id~~~~~l~ 475 (514)
+.. +.++++.+.+.+.. ....+.+.| +++||.+.....|. .+..+..+|++++. .++++|++++++.|+
T Consensus 309 ~~~~~~~t~i~~v~~~~~~~~~~~~~~~L-~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~ 387 (416)
T PRK13034 309 LVSGGTDNHLLLVDLRPKGLSGKDAEQAL-ERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWIL 387 (416)
T ss_pred eccCCCCCcEEEEEcCCCCCCHHHHHHHH-HhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHH
Confidence 764 46678888776543 345555777 58999997532211 12225689999886 778999999999999
Q ss_pred HHHHHc
Q psy16848 476 AVWKSL 481 (514)
Q Consensus 476 ~~l~~~ 481 (514)
+++...
T Consensus 388 ~~~~~~ 393 (416)
T PRK13034 388 DVLDDL 393 (416)
T ss_pred HHHhcC
Confidence 998854
No 62
>KOG1358|consensus
Probab=99.96 E-value=1.6e-28 Score=233.13 Aligned_cols=358 Identities=22% Similarity=0.340 Sum_probs=293.1
Q ss_pred hcCCceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEecccccccc
Q psy16848 14 HKSNRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDS 90 (514)
Q Consensus 14 ~~~g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~ 90 (514)
..+|+.+++|+|.+|++ ++++.+.+...+++||.+.+|++.+||+.+.+..+++++++++|.+++++.+-|-.++.+
T Consensus 90 ~i~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~aivYs~gF~ti~S 169 (467)
T KOG1358|consen 90 TIDGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTEDAIVYSYGFSTIES 169 (467)
T ss_pred EecCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCcceeeeccccchhhh
Confidence 35889999999999995 899999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHh
Q psy16848 91 TLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 91 ~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
++.++++ +||.+.+++..+..++.++++.+..++.|.|+|+++|++.+.+......|.
T Consensus 170 ~ipafsK--rGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhndm~~lerll~E~~~~~~K~-------------------- 227 (467)
T KOG1358|consen 170 AIPAFSK--RGDIIFVDEAVNFAIQKGLQLSRSTISYFKHNDMEDLERLLPEQEDEDQKN-------------------- 227 (467)
T ss_pred cchhhhc--cCcEEEEehhhhHHHHHHHhhhhheeEEecCCCHHHHHHhccCcchhhhhc--------------------
Confidence 9999988 999999999999999999999999999999999999998775533111110
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQ 250 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 250 (514)
T Consensus 228 -------------------------------------------------------------------------------- 227 (467)
T KOG1358|consen 228 -------------------------------------------------------------------------------- 227 (467)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhccCCC-ceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCc-cCceEEEcCCc
Q psy16848 251 VLENMDVKI-PKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQL-HNMDIISGTLG 328 (514)
Q Consensus 251 ~l~~~~~~~-~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~-~~~di~~~S~s 328 (514)
..... .+.++++...-++|.+.|+++|.++..+|-..+|.||.+++|.+|+.|++..++++.. .+.|++++|+.
T Consensus 228 ----~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~ 303 (467)
T KOG1358|consen 228 ----PKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASME 303 (467)
T ss_pred ----cccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccc
Confidence 00011 3578889999999999999999999999999999999999999999999999998874 67899999999
Q ss_pred ccccCCCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc
Q psy16848 329 KAFGNIGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE 407 (514)
Q Consensus 329 K~lg~~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 407 (514)
-+++..||+.+++.-+++.-+-...++.|+.+.|+....++..++.....+ +++.+.++.....+.+.|... ++.+.
T Consensus 304 ~alas~GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~--p~~~~~L~~k~~~~H~~l~~~s~~~v~ 381 (467)
T KOG1358|consen 304 TALASGGGFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWN--PEIVQPLRAKVAKFHAALSSNSGFIVS 381 (467)
T ss_pred ccccccCceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhC--cchhhhhhccccccchhhhcCCceEEe
Confidence 999887899888655555444445667788899999999999999876432 247777777777778888776 56665
Q ss_pred cC-CCcEEEEEeCCC--------ccHHHHHHHHHHhCCeEEecccCCCC-C--CCCcEEEEEeCCCCCHHHHHHHHHHHH
Q psy16848 408 HT-PSHIIPIKIGNP--------ALNTKICDMLLKEKGHYVQPINYPTV-P--VGEEKIRLAPTPFHTREMIDKFVTDLL 475 (514)
Q Consensus 408 ~~-~~~~~~i~l~~~--------~~~~~~~~~Ll~~~GI~v~~~~~~~~-~--~~~~~iRl~~~~~~t~e~id~~~~~l~ 475 (514)
.+ .++++.+.+... ...++++++++ .+++.+....+-.. . .-+..+|+++...+++||++++++.++
T Consensus 382 ~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i-~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik 460 (467)
T KOG1358|consen 382 GSPESPIIHLQLERSYGSREKEEKLLEEIVDKCI-AEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIK 460 (467)
T ss_pred cCcCCceeeeeecccccchHHHHHHHHHHHHHHH-hhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 43 577777777541 12457888887 45888864442100 0 124589999999999999999999999
Q ss_pred HHHHH
Q psy16848 476 AVWKS 480 (514)
Q Consensus 476 ~~l~~ 480 (514)
+....
T Consensus 461 ~~~~~ 465 (467)
T KOG1358|consen 461 EVASA 465 (467)
T ss_pred HHHHh
Confidence 87654
No 63
>PRK07324 transaminase; Validated
Probab=99.96 E-value=2.3e-27 Score=241.37 Aligned_cols=321 Identities=21% Similarity=0.169 Sum_probs=227.8
Q ss_pred CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC---CCcEEEEeccccccccchhhccccCCCceEEe
Q psy16848 30 VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ---KEAGLVFTSCYVANDSTLFTLGKMIPGLHYIS 106 (514)
Q Consensus 30 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~ 106 (514)
.++.+ +++.+++......++ ...|. .++++.++++++ .+..++++++++|+..++.+++. +||+|++
T Consensus 40 ~~~~~-~~~~~~~~~~~~~Y~---~~~G~----~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~--~gd~Vl~ 109 (373)
T PRK07324 40 AGKNP-EAFYQELGQKKLTYG---WIEGS----PEFKEAVASLYQNVKPENILQTNGATGANFLVLYALVE--PGDHVIS 109 (373)
T ss_pred cCcch-HHHHHHHhcCCccCC---CCCCC----HHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCC--CCCEEEE
Confidence 35566 777777765322222 22233 467777777764 24456556667888888888866 9999999
Q ss_pred cCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccc
Q psy16848 107 DAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 186 (514)
Q Consensus 107 ~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (514)
+.+.|......++..|.+++.++...
T Consensus 110 ~~P~y~~~~~~~~~~g~~v~~v~~~~------------------------------------------------------ 135 (373)
T PRK07324 110 VYPTYQQLYDIPESLGAEVDYWQLKE------------------------------------------------------ 135 (373)
T ss_pred cCCCchhHHHHHHHcCCEEEEEeccc------------------------------------------------------
Confidence 99999887766666666655443210
Q ss_pred cccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEe
Q psy16848 187 AVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFE 266 (514)
Q Consensus 187 ~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~ 266 (514)
.+++....+.+++..++++++++++
T Consensus 136 -------------------------------------------------------~~~~~~d~~~l~~~~~~~~kli~i~ 160 (373)
T PRK07324 136 -------------------------------------------------------ENGWLPDLDELRRLVRPNTKLICIN 160 (373)
T ss_pred -------------------------------------------------------ccCCCCCHHHHHHhCCCCCcEEEEe
Confidence 0111112223333345678999999
Q ss_pred cCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC---eEEEe
Q psy16848 267 TVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYIVG 340 (514)
Q Consensus 267 ~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~ 340 (514)
+|+||||.+++ +++|.++|++||+++|+||+|.....+....++. . ..+..++++||||.+|.+| ||+++
T Consensus 161 ~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~---~-~~~~~I~~~s~SK~~~~~G~RiG~i~~ 236 (373)
T PRK07324 161 NANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIA---D-LYEKGISTNSMSKTYSLPGIRVGWIAA 236 (373)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChh---h-ccCCEEEEecchhhcCCccceeEEEec
Confidence 99999999999 8999999999999999999998433222111111 1 1245789999999999778 99999
Q ss_pred cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccCCCc-EEEEEe
Q psy16848 341 TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHTPSH-IIPIKI 418 (514)
Q Consensus 341 ~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~i~l 418 (514)
++++++.+........ .+.+.+.+.++..+++.. +..+++.++.++++++.+.+.|++. ++.+..+.++ ++++.+
T Consensus 237 ~~~li~~~~~~~~~~~--~~~~~~~q~~a~~~l~~~-~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~ 313 (373)
T PRK07324 237 NEEVIDILRKYRDYTM--ICAGVFDDMLASLALEHR-DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKL 313 (373)
T ss_pred CHHHHHHHHHHhCcEE--ecCChHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEe
Confidence 9999999988765542 355667777777777632 3456677888888999999999876 6666566554 455666
Q ss_pred CCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 419 GNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 419 ~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+...+..+++++|++++||.+.|+..+.. ++++|++++ .+++.+++.+++|++++++.
T Consensus 314 ~~~~~~~~~~~~ll~~~gv~v~pg~~F~~---~~~iRis~~--~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 314 DVDMPSEDFCLKLLKETGVLLVPGNRFDL---EGHVRIGYC--CDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred CCCCCHHHHHHHHHHhcCEEEECccccCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHhc
Confidence 65456788999987788999999986542 469999998 46889999999999988764
No 64
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.96 E-value=2.4e-27 Score=241.82 Aligned_cols=336 Identities=20% Similarity=0.178 Sum_probs=238.4
Q ss_pred CCceeeeccc---CCCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEecccccccc
Q psy16848 16 SNRVTCRLSS---VQYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDS 90 (514)
Q Consensus 16 ~g~~~~d~~~---~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~ 90 (514)
+|++++||.+ +.+++ ||++.+++.+++++..... .. ...+...++.+++.+..+.++++|++||++|++.
T Consensus 34 dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~---~~--~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~ 108 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPS---PA--FYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEG 108 (395)
T ss_pred CCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhccccc---cc--ccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHH
Confidence 7888999964 66776 7999999999998743321 11 1246677888888877667789999999999999
Q ss_pred chhhccc------cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCcc
Q psy16848 91 TLFTLGK------MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAIC 164 (514)
Q Consensus 91 ~l~~l~~------~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (514)
+++.+.. .++.+.|..+..+|.++..+++..+........ .|.
T Consensus 109 Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~----------------~~~--------------- 157 (395)
T PRK03715 109 AIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIF----------------APQ--------------- 157 (395)
T ss_pred HHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCC----------------CCC---------------
Confidence 9987642 123456777777888777776655432110000 000
Q ss_pred chhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCC
Q psy16848 165 PLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHND 244 (514)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d 244 (514)
-..+...+.+|
T Consensus 158 ---------------------------------------------------------------------~~~~~~~~~~d 168 (395)
T PRK03715 158 ---------------------------------------------------------------------VPGFPKAELND 168 (395)
T ss_pred ---------------------------------------------------------------------CCCceeeCCch
Confidence 00011223456
Q ss_pred hhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCc-cccCCCccC
Q psy16848 245 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGI-GERDGQLHN 319 (514)
Q Consensus 245 ~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~-~~~~~~~~~ 319 (514)
++.+++.+. +++++|+++++++..|...+ +++|+++|++||+++|+||+++ | +|+.|.++ .+..++ .
T Consensus 169 ~~~l~~~l~----~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G-~GRtG~~~a~~~~gv--~ 240 (395)
T PRK03715 169 IASVEKLIT----DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-G-CGRTGTLFAYELSGI--E 240 (395)
T ss_pred HHHHHHHcC----CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCCCcchhhHhhcCC--C
Confidence 777776664 45899999999999999877 9999999999999999999999 4 35555443 244554 7
Q ss_pred ceEEEcCCcccccC--CCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy16848 320 MDIISGTLGKAFGN--IGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRN 397 (514)
Q Consensus 320 ~di~~~S~sK~lg~--~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 397 (514)
+|++ +++|.+++ +.|++++++++.. +.... ...+++.+++.++++.++|+.+.++. ++++.+++.+++++
T Consensus 241 PDi~--t~gK~lg~G~p~~av~~~~~i~~-~~~~~--~~~T~~g~pl~~aaala~L~~l~~~~---l~~~~~~~g~~l~~ 312 (395)
T PRK03715 241 PDIM--TLGKGIGGGVPLAALLAKAEVAV-FEAGD--QGGTYNGNPLMTAVGVAVISQLLAPG---FLEGVRARGEYLKE 312 (395)
T ss_pred Ccee--eehhhhhCCcceEEEEEcccccc-ccCCC--cCCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHH
Confidence 8988 88999986 2377788877752 22111 12244678999999999999886544 78888999999998
Q ss_pred HHHhC----CCccccCCCcEEEEEeCCCccHHHHHHHHHHhC---CeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHH
Q psy16848 398 ELIQI----GFPVEHTPSHIIPIKIGNPALNTKICDMLLKEK---GHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKF 470 (514)
Q Consensus 398 ~L~~~----g~~~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~---GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~ 470 (514)
.|+++ ++..+...+.++.+.+.+. ....+.+.+. +. ||++.+. ..+.+|++++..+|++|++++
T Consensus 313 ~L~~l~~~~~i~~vrG~Glm~~i~l~~~-~~~~~~~~~~-~~~~~Gi~~~~~-------~~~~lR~~p~l~~t~~ei~~~ 383 (395)
T PRK03715 313 KLLELSEERGLEGERGEGLLRALLLGKD-IGPQIVEKAR-DMQPDGLLLNAP-------RPNLLRFMPALNVTTEEIDQM 383 (395)
T ss_pred HHHHHhhcCCcCeEEcceeEEEEEecCc-hHHHHHHHHH-hccCCCEEEeec-------CCCEEEEeCCcccCHHHHHHH
Confidence 88765 4433455677888988653 2334444443 44 9998632 235899999999999999999
Q ss_pred HHHHHHHHHHc
Q psy16848 471 VTDLLAVWKSL 481 (514)
Q Consensus 471 ~~~l~~~l~~~ 481 (514)
+++|+++++++
T Consensus 384 ~~~l~~~l~~~ 394 (395)
T PRK03715 384 IAMLRSVLDKL 394 (395)
T ss_pred HHHHHHHHHhh
Confidence 99999998764
No 65
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.96 E-value=3.5e-27 Score=241.34 Aligned_cols=339 Identities=19% Similarity=0.195 Sum_probs=233.1
Q ss_pred ceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC----CCcEEEEeccccccccc
Q psy16848 18 RVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ----KEAGLVFTSCYVANDST 91 (514)
Q Consensus 18 ~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~~~i~~~sGt~a~~~~ 91 (514)
...+|+..++ +...+.+.+++.+.+.. ....+....|..++.+.+.+.+.+..| .+..++++++++++..+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~ 105 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAKK---GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLA 105 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHhc---CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHH
Confidence 3568885433 33345666655544432 122222333445555666666554433 23445455556677778
Q ss_pred hhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhh
Q psy16848 92 LFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCE 171 (514)
Q Consensus 92 l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (514)
+.++.. +||.|+++.++|......++..|++++.++..+.+
T Consensus 106 ~~~~~~--~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~------------------------------------- 146 (384)
T PRK06348 106 LQSILD--PGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEED------------------------------------- 146 (384)
T ss_pred HHHhcC--CCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCc-------------------------------------
Confidence 777765 99999999999998888777777766654321000
Q ss_pred hhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHH
Q psy16848 172 VSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQV 251 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~ 251 (514)
+. ..|++.+++.
T Consensus 147 -----------------------~~---------------------------------------------~~d~~~l~~~ 158 (384)
T PRK06348 147 -----------------------GF---------------------------------------------QINVKKLEAL 158 (384)
T ss_pred -----------------------CC---------------------------------------------cCCHHHHHHh
Confidence 00 0133444443
Q ss_pred HhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCc
Q psy16848 252 LENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLG 328 (514)
Q Consensus 252 l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~s 328 (514)
+ .++++++++++|+||||.+++ +++|.++|+++++++|+||+|.....+....++....+ ..+.+++++|||
T Consensus 159 ~----~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~SfS 233 (384)
T PRK06348 159 I----TSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAG-MPERTITFGSFS 233 (384)
T ss_pred h----CcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCC-CcCcEEEEecch
Confidence 3 345788999999999999999 78899999999999999999995443322222222222 135789999999
Q ss_pred ccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CC
Q psy16848 329 KAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GF 404 (514)
Q Consensus 329 K~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 404 (514)
|.++.+| ||+++++++++.+....... ..+.+.+.+.++..+++.. +.+.+++++.++++++++.+.|++. ++
T Consensus 234 K~~~l~GlRiG~~v~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~~~~~~L~~~~~~ 310 (384)
T PRK06348 234 KDFAMTGWRIGYVIAPDYIIETAKIINEGI--CFSAPTISQRAAIYALKHR-DTIVPLIKEEFQKRLEYAYKRIESIPNL 310 (384)
T ss_pred hccCCccccceeeecCHHHHHHHHHHHHhc--cCCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999668 99999999998887766544 2356788888888887643 3456778888899999999999887 66
Q ss_pred ccccCCCc-EEEEEeCC-CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 405 PVEHTPSH-IIPIKIGN-PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 405 ~~~~~~~~-~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
.+..+.++ ++++.++. ..+..++++.+++++||.+.|+..+. ..+.+++|++++ .+++++++++++|+++
T Consensus 311 ~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~-~~~~~~iRi~~~--~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 311 SLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFG-ESGEGYIRLACT--VGIEVLEEAFNRIEKM 382 (384)
T ss_pred eeccCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhc-cCCCCeEEEEec--CCHHHHHHHHHHHHhh
Confidence 66666666 45778763 45678899988657899999998754 334689999997 5788999999988753
No 66
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.96 E-value=7.4e-27 Score=239.43 Aligned_cols=343 Identities=17% Similarity=0.152 Sum_probs=237.9
Q ss_pred ceeeeccc--CCCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC-----CcEEEEecccccccc
Q psy16848 18 RVTCRLSS--VQYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK-----EAGLVFTSCYVANDS 90 (514)
Q Consensus 18 ~~~~d~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-----~~~i~~~sGt~a~~~ 90 (514)
..++|+.. .++...+.+.+++.+.+.... ..+....|..++.+.+.+.+...++. +..++++++++++..
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~ 106 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQ---SHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSA 106 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC---CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 45788854 334446678888887776421 11222334455555565555544442 235555556778888
Q ss_pred chhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHh
Q psy16848 91 TLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 91 ~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
++.++.. +||.|+++.+.|......++..|.+++.++... +
T Consensus 107 ~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~------------------------------------ 147 (391)
T PRK07309 107 SLTAILE--PGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-N------------------------------------ 147 (391)
T ss_pred HHHHhcC--CCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-c------------------------------------
Confidence 8887765 999999999999998877777777665543210 0
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQ 250 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 250 (514)
+. ..|.+.+++
T Consensus 148 ------------------------~~---------------------------------------------~~d~~~l~~ 158 (391)
T PRK07309 148 ------------------------DF---------------------------------------------VLTPEMLEK 158 (391)
T ss_pred ------------------------CC---------------------------------------------cCCHHHHHH
Confidence 00 013445555
Q ss_pred HHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCccCceEEEcC
Q psy16848 251 VLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLHNMDIISGT 326 (514)
Q Consensus 251 ~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~~di~~~S 326 (514)
.+++. .++++++++++|+||||.+++ +++|.++|++|++++|+|++|..... +....++... ..+..++++|
T Consensus 159 ~~~~~-~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~---~~~~~i~~~S 234 (391)
T PRK07309 159 AILEQ-GDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY---LPDQTILING 234 (391)
T ss_pred Hhhcc-CCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHh---ccCCEEEEec
Confidence 55432 235789999999999999998 79999999999999999999995443 3222222221 2356899999
Q ss_pred CcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCC
Q psy16848 327 LGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIG 403 (514)
Q Consensus 327 ~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 403 (514)
|||.+|.+| ||+++++++++.+....... ..+.+.+.+.++...++.. .......++.++++++++.+.|++.+
T Consensus 235 ~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 311 (391)
T PRK07309 235 LSKSHAMTGWRIGLIFAPAEFTAQLIKSHQYL--VTAATTMAQFAAVEALTNG-KDDALPMKKEYIKRRDYIIEKMTDLG 311 (391)
T ss_pred ChhhccCccceeEEEEeCHHHHHHHHHHHhhc--ccCCChHHHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998768 99999999999887654322 2356677777777777632 12234567788889999999999888
Q ss_pred CccccCCCc-EEEEEeCCCc--cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 404 FPVEHTPSH-IIPIKIGNPA--LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 404 ~~~~~~~~~-~~~i~l~~~~--~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
+.+..+.++ +++++++... +..++++.+++++||.+.|+..+. ..+++++|++++. +.+++++++++|++++++
T Consensus 312 ~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~-~~~~~~iRi~~~~--~~~~l~~~i~~l~~~~~~ 388 (391)
T PRK07309 312 FKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFG-PYGEGYVRLSYAA--SMETIKEAMKRLKEYMEE 388 (391)
T ss_pred CeecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCEEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 877767655 4567776532 457788877668899999998643 3356899999983 688999999999998876
Q ss_pred c
Q psy16848 481 L 481 (514)
Q Consensus 481 ~ 481 (514)
.
T Consensus 389 ~ 389 (391)
T PRK07309 389 H 389 (391)
T ss_pred h
Confidence 4
No 67
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.96 E-value=4.8e-27 Score=241.38 Aligned_cols=344 Identities=18% Similarity=0.196 Sum_probs=237.9
Q ss_pred CCceeeecccCCCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----CcEEEEeccccccc
Q psy16848 16 SNRVTCRLSSVQYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EAGLVFTSCYVAND 89 (514)
Q Consensus 16 ~g~~~~d~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~i~~~sGt~a~~ 89 (514)
.+..++|+..++.. .++++.+++.+.+...... +....|...+.+++.+.+.+.+|. +..++++++++++.
T Consensus 29 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 105 (393)
T PRK05764 29 QGRDVISLGAGEPDFDTPEHIKEAAIEALDDGKTK---YTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALY 105 (393)
T ss_pred ccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCC---cCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHH
Confidence 45667888654433 2578888888877642211 111223334444444444433342 23455555567888
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.++.++.. +||.|+++.+.|......++..|.+++.++....+. |
T Consensus 106 ~~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~---------------------~------------ 150 (393)
T PRK05764 106 NAFMALLD--PGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENG---------------------F------------ 150 (393)
T ss_pred HHHHHhcC--CCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccC---------------------C------------
Confidence 78877766 999999999999888777777777766554310000 0
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHH
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLT 249 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 249 (514)
..|.+.++
T Consensus 151 ------------------------------------------------------------------------~~d~~~l~ 158 (393)
T PRK05764 151 ------------------------------------------------------------------------KLTVEQLE 158 (393)
T ss_pred ------------------------------------------------------------------------cCCHHHHH
Confidence 00233444
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccC-CCCCCccccCCCccCceEEEc
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYG-EHGAGIGERDGQLHNMDIISG 325 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g-~~~~~~~~~~~~~~~~di~~~ 325 (514)
+.+ .++++++++++|+||||.+++ +++|.++|++||+++|+||+|.....+ ....++........+.+++++
T Consensus 159 ~~l----~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 234 (393)
T PRK05764 159 AAI----TPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVN 234 (393)
T ss_pred Hhh----CccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEe
Confidence 433 345789999999999999998 789999999999999999999844432 222222222111235789999
Q ss_pred CCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 326 TLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 326 S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
||||.++.+| ||+++++++++.+....... ..+.++..+.++...++. ...++++.+++++++++.+.+.|++.
T Consensus 235 s~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (393)
T PRK05764 235 GFSKAYAMTGWRLGYAAGPKELIKAMSKLQSHS--TSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEI 311 (393)
T ss_pred cCcccccCccceeEEEecCHHHHHHHHHHHhhc--ccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999768 99999999999887665443 336677888888877763 23556778888899999999999998
Q ss_pred -CCccccCCCc-EEEEEeCCCc-----cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q psy16848 403 -GFPVEHTPSH-IIPIKIGNPA-----LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLL 475 (514)
Q Consensus 403 -g~~~~~~~~~-~~~i~l~~~~-----~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~ 475 (514)
++.+..+.++ ++++.++... +..++.+.+++++||.+.++..+.. .+++|++++ .+++++++++++|.
T Consensus 312 ~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~---~~~vRis~~--~~~~~~~~~i~~l~ 386 (393)
T PRK05764 312 PGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGA---PGYVRLSYA--TSLEDLEEGLERIE 386 (393)
T ss_pred CCCcccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCC---CCEEEEEec--CCHHHHHHHHHHHH
Confidence 8887777665 5556665432 2478888887678999999876432 579999998 47999999999999
Q ss_pred HHHHHc
Q psy16848 476 AVWKSL 481 (514)
Q Consensus 476 ~~l~~~ 481 (514)
+++++.
T Consensus 387 ~~~~~~ 392 (393)
T PRK05764 387 RFLESL 392 (393)
T ss_pred HHHHhh
Confidence 988753
No 68
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.96 E-value=2.3e-27 Score=244.29 Aligned_cols=338 Identities=21% Similarity=0.231 Sum_probs=243.7
Q ss_pred CCceeeecccCCCC------CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccc
Q psy16848 16 SNRVTCRLSSVQYK------VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAND 89 (514)
Q Consensus 16 ~g~~~~d~~~~~~~------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~ 89 (514)
+|+.++||.++ |. .||+|.+++.++++.+.... +.+ ..+..+++++.++++++.++++|++|||+|++
T Consensus 29 dg~~~lD~~~~-~~~~~~Gh~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e 102 (400)
T PTZ00125 29 EGKKYYDFLSA-YSAVNQGHCHPKILAALINQAQKLTLTS---RAF--YNDVLGLAEKYITDLFGYDKVLPMNSGAEAGE 102 (400)
T ss_pred CCCEEEEcccC-HhhccCCcCCHHHHHHHHHHHHhccccc---ccc--cCHHHHHHHHHHHhCCCCCEEEEeCCcHHHHH
Confidence 67788888663 33 38999999999999865432 111 24678899999999998899999999999999
Q ss_pred cchhhcccc---------CCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc
Q psy16848 90 STLFTLGKM---------IPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT 160 (514)
Q Consensus 90 ~~l~~l~~~---------~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 160 (514)
.++..+... ++...|..+..+|..+..++...+........
T Consensus 103 ~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~------------------------------ 152 (400)
T PTZ00125 103 TALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNF------------------------------ 152 (400)
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccC------------------------------
Confidence 999876410 13446677778888877666554321100000
Q ss_pred CCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEe
Q psy16848 161 GAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIY 240 (514)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v 240 (514)
......+..+
T Consensus 153 ----------------------------------------------------------------------~~~~~~~~~~ 162 (400)
T PTZ00125 153 ----------------------------------------------------------------------GPFVPGFELV 162 (400)
T ss_pred ----------------------------------------------------------------------CCCCCCceEe
Confidence 0000123445
Q ss_pred cCCChhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCc-cccC
Q psy16848 241 RHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGI-GERD 314 (514)
Q Consensus 241 ~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~-~~~~ 314 (514)
+.+|.+.+++.++ .+++++|++++++||+|.+.| +++|.++|++||+++|+||+|+ +|..|. .+ ....
T Consensus 163 ~~~d~~~le~~l~---~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~---~~~~~~~ 236 (400)
T PTZ00125 163 DYNDVEALEKLLQ---DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGK---LLAHDHE 236 (400)
T ss_pred CCCCHHHHHHHhC---CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch---hhHHHhc
Confidence 6678888888885 246899999999999999998 9999999999999999999997 444432 22 1223
Q ss_pred CCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHH
Q psy16848 315 GQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDI 391 (514)
Q Consensus 315 ~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 391 (514)
+. .+|++ +++|++++.+ |++++++++.+.+....... +.+.++..++++.++++.+.+++ ..++.+++
T Consensus 237 ~~--~pd~~--~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~--t~~~~~~~~~aa~~~l~~i~~~~---~~~~~~~~ 307 (400)
T PTZ00125 237 GV--KPDIV--LLGKALSGGLYPISAVLANDDVMLVIKPGEHGS--TYGGNPLACAVAVEALEVLKEEK---LAENAQRL 307 (400)
T ss_pred CC--CCCEE--EEcccccCCCcCcEEEEEcHHHHhhccCCCCCC--CCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHH
Confidence 33 67888 6789997633 88999999998876543333 34678899999999998876544 45666677
Q ss_pred HHHHHHHHHhC----CC-ccccCCCcEEEEEeCC--CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCH
Q psy16848 392 VAYLRNELIQI----GF-PVEHTPSHIIPIKIGN--PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTR 464 (514)
Q Consensus 392 ~~~l~~~L~~~----g~-~~~~~~~~~~~i~l~~--~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~ 464 (514)
.+++++.|+++ +. ....+.+.++++.++. .....++++.|+ ++||.+.++ +.+++|++++..+++
T Consensus 308 ~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-------~~~~lRi~~~~~~~~ 379 (400)
T PTZ00125 308 GEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSDGVNAWDLCLKLK-ENGLLAKPT-------HDNIIRFAPPLVITK 379 (400)
T ss_pred HHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCcchHHHHHHHHHH-HCCeEEeec-------CCCEEEEECCccCCH
Confidence 77777777664 22 1124456677777763 345678899996 899999753 246899999988999
Q ss_pred HHHHHHHHHHHHHHHHcC
Q psy16848 465 EMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 465 e~id~~~~~l~~~l~~~~ 482 (514)
+++++++++|+++++++.
T Consensus 380 ~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 380 EQLDQALEIIKKVLKSFD 397 (400)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999988763
No 69
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.96 E-value=3.3e-27 Score=246.40 Aligned_cols=364 Identities=15% Similarity=0.118 Sum_probs=243.2
Q ss_pred cCCceeeeccc---CCCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC---CCcEEEEecccc
Q psy16848 15 KSNRVTCRLSS---VQYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ---KEAGLVFTSCYV 86 (514)
Q Consensus 15 ~~g~~~~d~~~---~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~i~~~sGt~ 86 (514)
.+|+.|+||.+ +.++| ||+|++++.+++++.....+ ......+...++++++.+.+. .++++|++||++
T Consensus 86 ~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~---~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsE 162 (504)
T PLN02760 86 INGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHS---FWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSE 162 (504)
T ss_pred CCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceec---ccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHH
Confidence 37788888865 56665 79999999999998554221 112345778899999988853 346788999999
Q ss_pred ccccchhhccc-------cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccc
Q psy16848 87 ANDSTLFTLGK-------MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSM 159 (514)
Q Consensus 87 a~~~~l~~l~~-------~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~ 159 (514)
|++.|++.... .++.+.|..+..+|.+++.+++..+.+...... ....+.+ .+
T Consensus 163 A~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~-------------~~~~~~~------~~- 222 (504)
T PLN02760 163 ANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKF-------------DLPAPFV------LH- 222 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCC-------------CCCCCCc------EE-
Confidence 99999986631 123456666777777776666655432210000 0000000 00
Q ss_pred cCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEE
Q psy16848 160 TGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKII 239 (514)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~ 239 (514)
+..|..+...+. ......
T Consensus 223 ------------------------------------------------------------~~~p~~~~~~~~--~~~~~~ 240 (504)
T PLN02760 223 ------------------------------------------------------------TDCPHYWRFHLP--GETEEE 240 (504)
T ss_pred ------------------------------------------------------------eCCCcccccCCC--CCcHHH
Confidence 000000000000 000000
Q ss_pred ecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccC
Q psy16848 240 YRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERD 314 (514)
Q Consensus 240 v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~ 314 (514)
+.....+.+++.+.+...+++++|++++++...|.+.| +++|+++|++||+++|+||+++ +|++|..+ ..+.+
T Consensus 241 ~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~--a~e~~ 318 (504)
T PLN02760 241 FSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMF--GCDKY 318 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhh--HHHhc
Confidence 00001234555554433456899999999999999988 9999999999999999999996 88887633 23455
Q ss_pred CCccCceEEEcCCcccccC---CCeEEEecHHHHHHHHhhc-----CceEeccCCcHHHHHHHHHHHHHhhhchHHHHHH
Q psy16848 315 GQLHNMDIISGTLGKAFGN---IGGYIVGTKNFIDTIRSYA-----AGFIFTTSLPPTVLAGAREAIRILSSQEGVELRA 386 (514)
Q Consensus 315 ~~~~~~di~~~S~sK~lg~---~GG~l~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 386 (514)
++ .||++ +++|++|+ +-|.+++++++.+.+.... ...+++++.+|+.++++.++|+.+.++. +.+
T Consensus 319 gv--~PDiv--tlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~---l~~ 391 (504)
T PLN02760 319 NI--KPDLV--SLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERN---IPE 391 (504)
T ss_pred CC--CCcEE--EecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCC---HHH
Confidence 55 79998 99999976 2377888999988875421 1123355789999999999999987655 788
Q ss_pred HHHHHHHHHHHHHHhC-CCcc---ccCCCcEEEEEeCCCc-----------cHHHHHHHHHHhCCeEEecccCCCCCCCC
Q psy16848 387 KHQDIVAYLRNELIQI-GFPV---EHTPSHIIPIKIGNPA-----------LNTKICDMLLKEKGHYVQPINYPTVPVGE 451 (514)
Q Consensus 387 ~~~~~~~~l~~~L~~~-g~~~---~~~~~~~~~i~l~~~~-----------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~ 451 (514)
+.+++.+++++.|+++ ..++ +...|.++.+++.+.. ....+.+.++ ++||.+.+. .
T Consensus 392 ~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~--------g 462 (504)
T PLN02760 392 HVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECK-KRGMLVRVA--------G 462 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHH-hCCcEEEec--------C
Confidence 8888888888888775 2222 2345667787774321 1345777885 899998631 2
Q ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 452 EKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 452 ~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+.+|++++..+|++|+|+++++++++++++
T Consensus 463 ~~lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 463 DNIMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999998776
No 70
>PRK09148 aminotransferase; Validated
Probab=99.96 E-value=6.4e-27 Score=240.82 Aligned_cols=348 Identities=12% Similarity=0.075 Sum_probs=239.9
Q ss_pred cCCceeeecccCCC--CCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----CcEEEEecc-ccc
Q psy16848 15 KSNRVTCRLSSVQY--KVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EAGLVFTSC-YVA 87 (514)
Q Consensus 15 ~~g~~~~d~~~~~~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~i~~~sG-t~a 87 (514)
..|..++|+..++. ...+.+.+++.+.+... ....+....|..++.+.+.+.+.+.+|. +..+++|+| +++
T Consensus 27 ~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 27 AAGADIIDLGMGNPDLPTPQHIVDKLCETAQDP--RTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred hcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCc--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 35677899965432 23567777777665421 1122223345556666666666555453 324555555 566
Q ss_pred cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchh
Q psy16848 88 NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK 167 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (514)
+..++.+++. +||.|+++.++|......++..|.+++.++..+-
T Consensus 105 l~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~---------------------------------- 148 (405)
T PRK09148 105 FANMAQAITA--PGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPD---------------------------------- 148 (405)
T ss_pred HHHHHHHhcC--CCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCC----------------------------------
Confidence 7777777765 9999999999998887666666666655443100
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH 247 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~ 247 (514)
....+.
T Consensus 149 --------------------------------------------------------------------------~~~~~~ 154 (405)
T PRK09148 149 --------------------------------------------------------------------------EEFFPA 154 (405)
T ss_pred --------------------------------------------------------------------------CCCccC
Confidence 001122
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC-CCCCccccCCCccCceEE
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE-HGAGIGERDGQLHNMDII 323 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~-~~~~~~~~~~~~~~~di~ 323 (514)
+++.++.. .++++++++++|+||||.+++ +++|.++|++||+++|+||+|.....+. ...++..... ..+..++
T Consensus 155 l~~~~~~~-~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~-~~~~~i~ 232 (405)
T PRK09148 155 LERAVRHS-IPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPG-AKDVTVE 232 (405)
T ss_pred HHHHHhhc-cccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCC-ccCcEEE
Confidence 33333322 246789999999999999999 5889999999999999999999543322 1111222111 1245678
Q ss_pred EcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy16848 324 SGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELI 400 (514)
Q Consensus 324 ~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 400 (514)
++||||.+|.+| ||+++++++++.+....... ..+.+.+.+.++...++.. +.++++.++.++++++.+.+.|+
T Consensus 233 ~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~~~--~~~~~~~~q~~~~~~L~~~-~~~~~~~~~~~~~~r~~l~~~L~ 309 (405)
T PRK09148 233 FTSMSKTFSMAGWRMGFAVGNERLIAALTRVKSYL--DYGAFTPIQVAATAALNGP-QDCIAEMRELYKKRRDVLVESFG 309 (405)
T ss_pred EeccccccCCcchheeeeeCCHHHHHHHHHHHHHh--ccCCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999778 99999999999888765443 2245677777777777632 35677888999999999999999
Q ss_pred hCCCccccCCC-cEEEEEeCCC---ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 401 QIGFPVEHTPS-HIIPIKIGNP---ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 401 ~~g~~~~~~~~-~~~~i~l~~~---~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
+.++.+..+.+ .+++++++.. ....++++.+++++||.+.|+..+. ..+.+++|++++ .+.+++++++++|.+
T Consensus 310 ~~~~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-~~~~~~~Ri~~~--~~~~~l~~al~~l~~ 386 (405)
T PRK09148 310 RAGWDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFG-EHGDGYVRIALV--ENEQRIRQAARNIKR 386 (405)
T ss_pred HcCCccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 98887655544 4777887653 2356888887667899999998643 334679999997 578999999999999
Q ss_pred HHHHcC
Q psy16848 477 VWKSLD 482 (514)
Q Consensus 477 ~l~~~~ 482 (514)
++.+.+
T Consensus 387 ~l~~~~ 392 (405)
T PRK09148 387 FLSSAD 392 (405)
T ss_pred HHHHHH
Confidence 887653
No 71
>PRK07683 aminotransferase A; Validated
Probab=99.96 E-value=9.9e-27 Score=238.17 Aligned_cols=341 Identities=18% Similarity=0.176 Sum_probs=233.4
Q ss_pred ceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----C-cEEEEecccccccc
Q psy16848 18 RVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----E-AGLVFTSCYVANDS 90 (514)
Q Consensus 18 ~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~-~~i~~~sGt~a~~~ 90 (514)
..++|+..+. +..++.+.+++.+.+..... .+....|..++.+++.+.+.+..|. + ..++++++++|+..
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~ 104 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAITENYT---SYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDI 104 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCC---CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 4578886543 22356788888888774221 1112234445555555555443342 2 34545555778887
Q ss_pred chhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHh
Q psy16848 91 TLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 91 ~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
++.++.. +||.|+++.+.|......++..|++++.++.+
T Consensus 105 ~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~--------------------------------------- 143 (387)
T PRK07683 105 AFRTILE--PGTEVILPAPIYPGYEPIIRLCGAKPVFIDTR--------------------------------------- 143 (387)
T ss_pred HHHHhCC--CCCEEEEcCCCccchHHHHHHcCCEEEEeecC---------------------------------------
Confidence 8777765 99999999999888776666666665544321
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQ 250 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 250 (514)
.+++....+
T Consensus 144 -----------------------------------------------------------------------~~~~~~~~~ 152 (387)
T PRK07683 144 -----------------------------------------------------------------------STGFRLTAE 152 (387)
T ss_pred -----------------------------------------------------------------------cccCCCCHH
Confidence 111211122
Q ss_pred HHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCC
Q psy16848 251 VLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTL 327 (514)
Q Consensus 251 ~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~ 327 (514)
.+.+...++++++++++|+||||.+++ +++|.++|+++|+++|+||+|.....+....++....+ ..+.+++++||
T Consensus 153 ~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~s~ 231 (387)
T PRK07683 153 ALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPE-MREKTIVINGL 231 (387)
T ss_pred HHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccC-CcCCeEEEeec
Confidence 233333346789999999999999998 78999999999999999999995543333223332211 23568999999
Q ss_pred cccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCC
Q psy16848 328 GKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGF 404 (514)
Q Consensus 328 sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 404 (514)
||.+|.+| ||+++++++++.+..... +. ..+.+.+.+.++...|+.. ..+.++.+++++++++.+.+.|.+.++
T Consensus 232 SK~~~~pGlRiG~i~~~~~l~~~~~~~~~-~~-~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~ 308 (387)
T PRK07683 232 SKSHSMTGWRIGFLFAPSYLAKHILKVHQ-YN-VTCASSISQYAALEALTAG-KDDAKMMRHQYKKRRDYVYNRLISMGL 308 (387)
T ss_pred cccccCccceeEEEEcCHHHHHHHHHHHH-hc-cCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999668 999999999988876542 21 1245566777777777532 245667788889999999999998887
Q ss_pred ccccCCCc-EEEEEeCC-CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 405 PVEHTPSH-IIPIKIGN-PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 405 ~~~~~~~~-~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
.+..+.++ ++++.++. ..+..+++..+++++||.+.|+..+. ..+++++|++++. +++++.+++++|.+++++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~-~~~~~~~Ri~~~~--~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 309 DVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFS-EYGEGYVRLSYAY--SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred cccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhC-CCCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 77667666 44455553 34466788776668999999988654 3346899999983 788999999999998764
No 72
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.96 E-value=3.3e-27 Score=243.46 Aligned_cols=344 Identities=20% Similarity=0.217 Sum_probs=235.7
Q ss_pred eeeecccCCCCCChhHHHHHHHHHHHhC-CCCCCcCc-ccCcchHHHHHHHHHHhHcCCC---cEEEEeccccccccchh
Q psy16848 19 VTCRLSSVQYKVPKGGRKCLGEALEKFG-TGAGGTRN-ISGNSLFHEKLEEDVAKLHQKE---AGLVFTSCYVANDSTLF 93 (514)
Q Consensus 19 ~~~d~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~---~~i~~~sGt~a~~~~l~ 93 (514)
.|.|.++... .++.+.+++.+.++... ....+... .....+..+++++.+++++|.+ ..++++|+|+++..++.
T Consensus 20 ~yld~~~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~ 98 (403)
T TIGR01979 20 VYLDSAATSQ-KPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAY 98 (403)
T ss_pred EEEeCccccC-CCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHH
Confidence 5566655442 35678888888776532 21111111 1112346778999999999965 34555556667666665
Q ss_pred hcc--ccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhh
Q psy16848 94 TLG--KMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCE 171 (514)
Q Consensus 94 ~l~--~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (514)
++. .+.+||.|++++++|.+....++
T Consensus 99 ~~~~~~~~~g~~vl~~~~~~~s~~~~~~---------------------------------------------------- 126 (403)
T TIGR01979 99 SWGDSNLKAGDEIVISEMEHHANIVPWQ---------------------------------------------------- 126 (403)
T ss_pred HhhhhcCCCCCEEEECcchhhHHHHHHH----------------------------------------------------
Confidence 542 13489999999999988653211
Q ss_pred hhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-CChhHHHH
Q psy16848 172 VSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-NDVNHLTQ 250 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~ 250 (514)
......|++++.++. .+.....+
T Consensus 127 --------------------------------------------------------~~~~~~g~~~~~v~~~~~~~~~~~ 150 (403)
T TIGR01979 127 --------------------------------------------------------LLAERTGATLKFIPLDDDGTLDLD 150 (403)
T ss_pred --------------------------------------------------------HHHHhcCcEEEEEecCCCCCCCHH
Confidence 111222334444431 11111223
Q ss_pred HHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccc
Q psy16848 251 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKA 330 (514)
Q Consensus 251 ~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~ 330 (514)
.+++..+++++++++++++|++|...|+++|.++|+++|+++|+|++|+.|.. +......++|++++|+||+
T Consensus 151 ~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~--------~~~~~~~~~d~~~~s~~K~ 222 (403)
T TIGR01979 151 DLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHM--------PVDVQALDCDFYVFSGHKM 222 (403)
T ss_pred HHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCcc--------ccCccccCCCEEEEecccc
Confidence 33333356789999999999999999999999999999999999999986643 1111134689999999999
Q ss_pred ccCCC-eEEEecHHHHHHHHhhcCc------------------eEec-cCCcHHHHHHHHHHHHHhhhchHHHHHHHHHH
Q psy16848 331 FGNIG-GYIVGTKNFIDTIRSYAAG------------------FIFT-TSLPPTVLAGAREAIRILSSQEGVELRAKHQD 390 (514)
Q Consensus 331 lg~~G-G~l~~~~~~~~~l~~~~~~------------------~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 390 (514)
+|+.| |+++.++++++.+.+...+ ..+. .+.+...+.++.++++++.+.+.++++++..+
T Consensus 223 ~gp~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~ 302 (403)
T TIGR01979 223 YGPTGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE 302 (403)
T ss_pred cCCCCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 99878 9999998887766432111 0011 23455667777888887766677888999999
Q ss_pred HHHHHHHHHHhC-CCccccCC-----CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCC-----CCCcEEEEEeC
Q psy16848 391 IVAYLRNELIQI-GFPVEHTP-----SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVP-----VGEEKIRLAPT 459 (514)
Q Consensus 391 ~~~~l~~~L~~~-g~~~~~~~-----~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~-----~~~~~iRl~~~ 459 (514)
+.+++.+.|+++ ++++..+. ++++.+.++. .+..++.+.| +++||.++++..|..+ ....++|++++
T Consensus 303 l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~ 380 (403)
T TIGR01979 303 LTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEG-VHPHDVGTIL-DEEGIAVRSGHHCAQPLMRRFGVPATCRASFY 380 (403)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCC-cCHHHHHHHH-hhCCEEEcchhhhhHHHHHHhCCCCEEEEEec
Confidence 999999999887 77765432 5677787764 3456788777 5999999876643211 12468999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHc
Q psy16848 460 PFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 460 ~~~t~e~id~~~~~l~~~l~~~ 481 (514)
.++|++|+++++++|+++++.+
T Consensus 381 ~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 381 IYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred cCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988765
No 73
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.96 E-value=9e-27 Score=239.36 Aligned_cols=343 Identities=13% Similarity=0.114 Sum_probs=236.4
Q ss_pred CCceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-----cEEEEecccc-c
Q psy16848 16 SNRVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-----AGLVFTSCYV-A 87 (514)
Q Consensus 16 ~g~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~i~~~sGt~-a 87 (514)
.|..++|+..+. +...|.+.+++.+.+.... ..++. ..|..++.+.+.+.+.+.+|.+ ..|++|+|++ +
T Consensus 42 ~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~--~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a 118 (410)
T PRK06290 42 PDMELIDMGVGEPDEMADESVVEVLCEEAKKPE--NRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA 118 (410)
T ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCC--CCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH
Confidence 355688986543 3346678888777664311 11121 2455666666666666554532 3577777764 5
Q ss_pred cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchh
Q psy16848 88 NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK 167 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (514)
+..++.++.. +||.|+++.+.|......++..|++++.++.... +.|
T Consensus 119 l~~~~~~~~~--~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~---------------------~~~---------- 165 (410)
T PRK06290 119 LAMLPSCFIN--PGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEE---------------------NNF---------- 165 (410)
T ss_pred HHHHHHHhCC--CCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCC---------------------cCC----------
Confidence 6666667765 9999999999998877777766766665443100 000
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH 247 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~ 247 (514)
..|++.
T Consensus 166 --------------------------------------------------------------------------~~d~~~ 171 (410)
T PRK06290 166 --------------------------------------------------------------------------LPDLDS 171 (410)
T ss_pred --------------------------------------------------------------------------cCCHHH
Confidence 003333
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEE
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIIS 324 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~ 324 (514)
+++.+ .++++++++++|+||||.+++ +++|.++|++||++||+||+|.....+....++..... ..+.++++
T Consensus 172 l~~~~----~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~-~~~~~I~i 246 (410)
T PRK06290 172 IPKDI----KEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPG-AKEVGVEI 246 (410)
T ss_pred HHHhh----cccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCC-ccccEEEE
Confidence 43333 335899999999999999999 68899999999999999999995443322222222221 23567999
Q ss_pred cCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy16848 325 GTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQ 401 (514)
Q Consensus 325 ~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 401 (514)
.||||.+|.+| ||+++++++++.+......+ ..+.+.+.+.++..+++. .+..++.++.++++++.+.+.|++
T Consensus 247 ~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~~~~~--~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~ 322 (410)
T PRK06290 247 HSLSKAYNMTGWRLAFVVGNELIVKAFATVKDNN--DSGQFIAIQKAGIYALDH--PEITEKIREKYSRRLDKLVKILNE 322 (410)
T ss_pred eechhhcCCchhheEeEEeCHHHHHHHHHHHhcc--ccCCcHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998778 99999999999888766444 334455677777777763 245677888999999999999999
Q ss_pred CCCccccCCCcE-EEEEeCCC-------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCC-CCCHHHHHHHHH
Q psy16848 402 IGFPVEHTPSHI-IPIKIGNP-------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTP-FHTREMIDKFVT 472 (514)
Q Consensus 402 ~g~~~~~~~~~~-~~i~l~~~-------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~-~~t~e~id~~~~ 472 (514)
.|+.+..+.+++ +++.+++. .+..++++.|+++.++.+.|+..+ .+++|++++. ..++++.+++++
T Consensus 323 ~g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~-----~~~lRi~~~~~~~~~~~~~~~~~ 397 (410)
T PRK06290 323 VGFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDA-----GHFLRFSVTFEAKDEEEEDRILE 397 (410)
T ss_pred CCCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccc-----cCeEEEEEEcccccccchhHHHH
Confidence 988777676664 45777653 256789999974445666665432 2589999973 346789999999
Q ss_pred HHHHHHHHcC
Q psy16848 473 DLLAVWKSLD 482 (514)
Q Consensus 473 ~l~~~l~~~~ 482 (514)
+|++.+.++.
T Consensus 398 ~l~~~~~~~~ 407 (410)
T PRK06290 398 EIKRRLSDVE 407 (410)
T ss_pred HHHHHHhhcc
Confidence 9999988764
No 74
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1e-26 Score=239.41 Aligned_cols=349 Identities=17% Similarity=0.126 Sum_probs=237.0
Q ss_pred CCceeeecccCCCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----CcEEEEeccc-ccc
Q psy16848 16 SNRVTCRLSSVQYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EAGLVFTSCY-VAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~i~~~sGt-~a~ 88 (514)
.+..++|+..++... .+.+.+++.+.+... ...++....|..++.+.+++++.+.+|. +..+++|+|+ +++
T Consensus 31 ~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al 108 (403)
T PRK08636 31 AGEDIIDFSMGNPDGPTPQHIIDKLCESAQKP--KTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGY 108 (403)
T ss_pred cCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCC--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHH
Confidence 456688886544332 344555555544321 1122223345566777777777665552 2246566665 567
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
..++.+++. +||.|+++.++|......++..|.+++.++.. .+.
T Consensus 109 ~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~~~--------------------------------- 152 (403)
T PRK08636 109 VHLVQAITN--PGDVAIVPDPAYPIHSQAFILAGGNVHKMPLE-YNE--------------------------------- 152 (403)
T ss_pred HHHHHHhCC--CCCEEEEcCCCCcchHHHHHhcCCEEEEEecc-ccc---------------------------------
Confidence 778788876 99999999999999888888888877665431 000
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH-
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH- 247 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~- 247 (514)
+.+ -|.+.
T Consensus 153 --------------------------~~~---------------------------------------------~d~~~l 161 (403)
T PRK08636 153 --------------------------DFE---------------------------------------------LDEDQF 161 (403)
T ss_pred --------------------------cCc---------------------------------------------cChhhh
Confidence 000 02222
Q ss_pred ---HHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccC-CCCCCccccCCCccCc
Q psy16848 248 ---LTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYG-EHGAGIGERDGQLHNM 320 (514)
Q Consensus 248 ---l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g-~~~~~~~~~~~~~~~~ 320 (514)
+++.+++. ..+++++++++||||||.+++ +++|.++|++|++++|+||+|...... ....++..... ..+.
T Consensus 162 ~~~l~~~~~~~-~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~-~~~~ 239 (403)
T PRK08636 162 FENLEKALRES-SPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEG-AKDV 239 (403)
T ss_pred hhHHHHHHhhc-cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCC-cccc
Confidence 23333322 245889999999999999999 689999999999999999999944332 22222222221 1245
Q ss_pred eEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy16848 321 DIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRN 397 (514)
Q Consensus 321 di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 397 (514)
.++++||||.+|.+| ||+++++++++.+....... ..+.+.+.+.++..+++.. ..+++++++.++++++.+.+
T Consensus 240 ~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~~~~~~~~--~~~~~~~~q~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 316 (403)
T PRK08636 240 AVESYTLSKSYNMAGWRVGFVVGNKKLVGALKKIKSWL--DYGMFTPIQVAATIALDGD-QSCVEEIRETYRKRRDVLIE 316 (403)
T ss_pred EEEEEecccccCCccceeeeeeCCHHHHHHHHHHHHHh--cccCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 677899999998768 99999999999887655432 2244555565555555422 34667788889999999999
Q ss_pred HHHhCCCccccCC-CcEEEEEeCCC---ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHH
Q psy16848 398 ELIQIGFPVEHTP-SHIIPIKIGNP---ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTD 473 (514)
Q Consensus 398 ~L~~~g~~~~~~~-~~~~~i~l~~~---~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~ 473 (514)
.|++.++.+..+. +.++++++++. .+..+++..+++++||.+.|+..+. ..+.+++|++++ .+++++++++++
T Consensus 317 ~L~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~-~~~~~~iRi~~~--~~~~~l~~~~~r 393 (403)
T PRK08636 317 SFANAGWELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFG-EYGDEYVRIALI--ENENRIRQAARN 393 (403)
T ss_pred HHHHCCCcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhC-cCCCCeEEEEec--CCHHHHHHHHHH
Confidence 9999887766554 45777888753 2357888887667899999998643 334679999997 578999999999
Q ss_pred HHHHHHHc
Q psy16848 474 LLAVWKSL 481 (514)
Q Consensus 474 l~~~l~~~ 481 (514)
|+++++..
T Consensus 394 l~~~l~~~ 401 (403)
T PRK08636 394 IKKFLKEL 401 (403)
T ss_pred HHHHHHhh
Confidence 99988763
No 75
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=6.4e-27 Score=239.34 Aligned_cols=338 Identities=15% Similarity=0.128 Sum_probs=235.3
Q ss_pred eeecccCCCCC--ChhHHHHHHHHHHHhCCCCC-CcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhcc
Q psy16848 20 TCRLSSVQYKV--PKGGRKCLGEALEKFGTGAG-GTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLG 96 (514)
Q Consensus 20 ~~d~~~~~~~~--~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~ 96 (514)
+|+++.-.-++ .+++.+++.+....++.+.. ..+...+..+..+++++.+++++|.+++++++|||+++..++.++.
T Consensus 20 ~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~ 99 (387)
T PRK09331 20 FINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLC 99 (387)
T ss_pred ccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhc
Confidence 44444333333 46777777777654332211 2234445567899999999999999999999999999999998886
Q ss_pred ccCCCceEEecCccchhhhhhhhcCCCCeeeccCC-ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhh
Q psy16848 97 KMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHN-DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQ 175 (514)
Q Consensus 97 ~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~-d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (514)
. +||.|+++.+.|.+...+++..|++++.++.. +.
T Consensus 100 ~--~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~------------------------------------------ 135 (387)
T PRK09331 100 K--KGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYP------------------------------------------ 135 (387)
T ss_pred C--CCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCc------------------------------------------
Confidence 6 99999999999999999888888888776541 00
Q ss_pred cCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhc
Q psy16848 176 HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENM 255 (514)
Q Consensus 176 ~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~ 255 (514)
+ ...|.+.+++.+++.
T Consensus 136 -------------------~---------------------------------------------~~~d~~~l~~~l~~~ 151 (387)
T PRK09331 136 -------------------E---------------------------------------------YKITPEAYAEKIEEV 151 (387)
T ss_pred -------------------C---------------------------------------------CCcCHHHHHHHHHHh
Confidence 0 001445555555432
Q ss_pred ---cCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc
Q psy16848 256 ---DVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG 332 (514)
Q Consensus 256 ---~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg 332 (514)
..+++++|++++++|++|...|+++|.++|+++|+++|+|++|+.|... ......+.|++++|+||+++
T Consensus 152 ~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~--------~~~~~~g~D~~~~s~~K~l~ 223 (387)
T PRK09331 152 KEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMP--------VDGKKLGADFIVGSGHKSMA 223 (387)
T ss_pred hhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcC--------CCHHHcCCCEEEeeCccccc
Confidence 1245889999999999999999999999999999999999999976541 22223468999999999997
Q ss_pred CC-C-eEEEecHHHHHHHHhhcCceE------eccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-C
Q psy16848 333 NI-G-GYIVGTKNFIDTIRSYAAGFI------FTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-G 403 (514)
Q Consensus 333 ~~-G-G~l~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 403 (514)
++ | |++++++++++.+......+. ++.+.++....++.++++...+ .. +..++..++.+++.+.|+++ |
T Consensus 224 ~~~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~-~~-~~~~~~~~~~~~l~~~L~~l~g 301 (387)
T PRK09331 224 ASAPSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVE-RV-KRWDEEVKKARWFVDELEKIEG 301 (387)
T ss_pred CCCCEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHhcCCC
Confidence 53 3 999999998888765433221 2223333344455555654422 22 24556677888999999999 8
Q ss_pred Ccccc---CCCcEEEEEeCC--------CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHH
Q psy16848 404 FPVEH---TPSHIIPIKIGN--------PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVT 472 (514)
Q Consensus 404 ~~~~~---~~~~~~~i~l~~--------~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~ 472 (514)
+++.. +..+++.+..+. .....++.+.|. ++||...+ +.....+|+.. ..+|++|++++++
T Consensus 302 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~gI~~~~------~~~~~i~ri~~-~g~t~~di~~l~~ 373 (387)
T PRK09331 302 FKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELK-KRGIHGIK------PGATKEFKLST-YGLTWEQVEYVAD 373 (387)
T ss_pred EEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHH-HcCceEEc------cCCceEEEEEe-ccCCHHHHHHHHH
Confidence 88762 334566565441 112356888885 88998432 11234455555 4589999999999
Q ss_pred HHHHHHHHcCC
Q psy16848 473 DLLAVWKSLDL 483 (514)
Q Consensus 473 ~l~~~l~~~~~ 483 (514)
+|++++++.+.
T Consensus 374 aL~~i~~~~~~ 384 (387)
T PRK09331 374 AFKEIAEKYGL 384 (387)
T ss_pred HHHHHHHhcCC
Confidence 99999887654
No 76
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=7.2e-27 Score=237.88 Aligned_cols=326 Identities=17% Similarity=0.165 Sum_probs=234.5
Q ss_pred CCceeeecccCC-CCC-ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-cEEEEeccccc-cccc
Q psy16848 16 SNRVTCRLSSVQ-YKV-PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-AGLVFTSCYVA-NDST 91 (514)
Q Consensus 16 ~g~~~~d~~~~~-~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~i~~~sGt~a-~~~~ 91 (514)
.+..++||.++. +++ +|.+.+++.+.+.... .+ +.. ...++++.++++++.+ +.+++++|++. +..+
T Consensus 30 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~y-------~~~-~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~ 100 (367)
T PRK02731 30 GIADIIKLASNENPLGPSPKAIEAIRAAADELH-RY-------PDG-SGFELKAALAEKFGVDPERIILGNGSDEILELL 100 (367)
T ss_pred CCCceEEecCCCCCCCCCHHHHHHHHHHHHhhc-CC-------CCC-cHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHH
Confidence 346689998763 554 6788888888776421 11 111 1368999999999864 45777777665 4455
Q ss_pred hhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhh
Q psy16848 92 LFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCE 171 (514)
Q Consensus 92 l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (514)
+.++.+ +||.|+++.+.|.......+..|.+++.++..+
T Consensus 101 ~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~--------------------------------------- 139 (367)
T PRK02731 101 ARAYLG--PGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAKD--------------------------------------- 139 (367)
T ss_pred HHHhcC--CCCEEEEecCCHHHHHHHHHHcCCeEEEecccC---------------------------------------
Confidence 566655 999999999988766555555555555433210
Q ss_pred hhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHH
Q psy16848 172 VSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQV 251 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~ 251 (514)
. ..|.+.+++.
T Consensus 140 ------------------------~---------------------------------------------~~~~~~l~~~ 150 (367)
T PRK02731 140 ------------------------Y---------------------------------------------GHDLDAMLAA 150 (367)
T ss_pred ------------------------C---------------------------------------------CCCHHHHHHH
Confidence 0 0133444444
Q ss_pred HhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHc--CCEEEEeccccccccCC-CCCCccccCCCccCceEEEcCCc
Q psy16848 252 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQH--GALTFVDEVHAVGLYGE-HGAGIGERDGQLHNMDIISGTLG 328 (514)
Q Consensus 252 l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~--gv~li~Dea~~~g~~g~-~~~~~~~~~~~~~~~di~~~S~s 328 (514)
+ .++++++++++++||||.+++.+++.++++.+ |+++|+||+|....... ...++ .... ..+..++++|||
T Consensus 151 ~----~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~-~~~~-~~~~~i~~~S~S 224 (367)
T PRK02731 151 V----TPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGL-ELVA-KFPNVVVTRTFS 224 (367)
T ss_pred h----CCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHH-HHHh-hcCCEEEEeeeh
Confidence 4 34688999999999999999999999998875 99999999998444322 11111 1111 124678999999
Q ss_pred ccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCc
Q psy16848 329 KAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFP 405 (514)
Q Consensus 329 K~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 405 (514)
|.+|.+| ||+++++++++.+......+ ..+.+.+.++.+.++. ...+++.++.++++++++.+.|++.|+.
T Consensus 225 K~~g~~G~RiG~l~~~~~~~~~l~~~~~~~----~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 298 (367)
T PRK02731 225 KAYGLAGLRVGYGIAPPEIIDALNRVRQPF----NVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAELGLE 298 (367)
T ss_pred HhhcCcccceeeeeCCHHHHHHHHHccCCC----CCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 9998767 99999999999888765443 4567777777777752 3456778888899999999999998877
Q ss_pred cccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 406 VEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 406 ~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
+.++.++++++.+++..+..++++.|. ++||.++++..+. .++++|++++ +.+++++++++|+++++
T Consensus 299 ~~~~~g~~~~i~~~~~~~~~~~~~~L~-~~gI~v~~~~~~~---~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 299 YIPSVGNFILVDFDDGKDAAEAYQALL-KRGVIVRPVAGYG---LPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred cCCCCceEEEEECCCCCCHHHHHHHHH-HCCEEEEeCCCCC---CCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 766677888898866567889999995 8999999876532 2468999997 78999999999998764
No 77
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.96 E-value=1.5e-26 Score=238.62 Aligned_cols=344 Identities=15% Similarity=0.127 Sum_probs=233.5
Q ss_pred CCceeeecccCC------CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC----------CCcEE
Q psy16848 16 SNRVTCRLSSVQ------YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ----------KEAGL 79 (514)
Q Consensus 16 ~g~~~~d~~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----------~~~~i 79 (514)
+|..++||.... +...+.+.+++.+.+... ....+....|..++.+.+.+.+.+.++ .+..+
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~ 108 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQ--ECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVV 108 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcC--CCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEE
Confidence 667889996433 345678888888877641 111222223444555555555443221 23345
Q ss_pred EEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccc
Q psy16848 80 VFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSM 159 (514)
Q Consensus 80 ~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~ 159 (514)
+++++++++..++.++.. +||.|+++.++|......++..|.+++.++... +
T Consensus 109 it~G~~~al~~~~~~~~~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~-~------------------------- 160 (412)
T PTZ00433 109 LCSGVSHAILMALTALCD--EGDNILVPAPGFPHYETVCKAYGIEMRFYNCRP-E------------------------- 160 (412)
T ss_pred EeCChHHHHHHHHHHhcC--CCCEEEEccCCcccHHHHHHHcCCEEEEEecCc-c-------------------------
Confidence 445556778888888865 999999999999888877777776665443210 0
Q ss_pred cCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEE
Q psy16848 160 TGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKII 239 (514)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~ 239 (514)
...
T Consensus 161 ----------------------------------~~~------------------------------------------- 163 (412)
T PTZ00433 161 ----------------------------------KDW------------------------------------------- 163 (412)
T ss_pred ----------------------------------ccC-------------------------------------------
Confidence 000
Q ss_pred ecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccC-CCCCCccccCC
Q psy16848 240 YRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYG-EHGAGIGERDG 315 (514)
Q Consensus 240 v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g-~~~~~~~~~~~ 315 (514)
..|.+.+++.+ .++++++++++|+||||.+++ +++|.++|+++|+++|+||+|.....+ ....++.....
T Consensus 164 --~~d~~~l~~~~----~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 237 (412)
T PTZ00433 164 --EADLDEIRRLV----DDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDT 237 (412)
T ss_pred --cCCHHHHHHHh----ccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccC
Confidence 00333443333 345889999999999999998 788899999999999999999844332 11112222211
Q ss_pred CccCceEEEcCCcccccCCC---eEEEe------cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHH
Q psy16848 316 QLHNMDIISGTLGKAFGNIG---GYIVG------TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRA 386 (514)
Q Consensus 316 ~~~~~di~~~S~sK~lg~~G---G~l~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 386 (514)
....++++||||.+|.+| ||+++ .+++++.+...... ..+.+.+.+.++...+....+.++++.++
T Consensus 238 --~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~q~a~~~~l~~~~~~~~~~~~~ 312 (412)
T PTZ00433 238 --TVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGML---VCGPCSVVQAALGEALLNTPQEHLEQIVA 312 (412)
T ss_pred --CCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhc---cCCCChHHHHHHHHHHhcCcHHHHHHHHH
Confidence 134689999999998778 99986 24566666554321 22567888888877776422456778889
Q ss_pred HHHHHHHHHHHHHHhC-CCccccCCC-cEEEEEeCCC-----ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeC
Q psy16848 387 KHQDIVAYLRNELIQI-GFPVEHTPS-HIIPIKIGNP-----ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPT 459 (514)
Q Consensus 387 ~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~~i~l~~~-----~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~ 459 (514)
.++++++.+.+.|++. ++.+..+.+ .+++++++.. .+..++++.|++++||.+.++..+.. .+++|++++
T Consensus 313 ~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~---~~~iRis~~ 389 (412)
T PTZ00433 313 KLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHM---PGFTRLTIS 389 (412)
T ss_pred HHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCC---CCeEEEEec
Confidence 9999999999999886 777666654 4677777641 24678999987568999999886532 469999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 460 PFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 460 ~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
. .++++++++++|.+++++.+
T Consensus 390 ~--~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 390 R--PVEVLREAVERIKAFCERHK 410 (412)
T ss_pred C--CHHHHHHHHHHHHHHHHHhc
Confidence 3 58889999999999988654
No 78
>PLN02624 ornithine-delta-aminotransferase
Probab=99.96 E-value=5.6e-27 Score=244.36 Aligned_cols=340 Identities=19% Similarity=0.236 Sum_probs=240.8
Q ss_pred cCCceeeecccCCCC------CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEecccccc
Q psy16848 15 KSNRVTCRLSSVQYK------VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAN 88 (514)
Q Consensus 15 ~~g~~~~d~~~~~~~------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~ 88 (514)
.+|+.++||.++ |. .||+|.+++.++++++..... .. ..+...+++++++++++.++++|++||++|+
T Consensus 72 ~dG~~ylD~~sg-~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~--~~---~~~~~~~la~~L~~~~~~~~~~f~~SGseA~ 145 (474)
T PLN02624 72 PEGKKYLDFLSA-YSAVNQGHCHPKIIKALTEQAEKLTLSSR--AF---YNDKFPEFAEYLTSMFGYDMVLPMNTGAEGV 145 (474)
T ss_pred CCCCEEEEcccc-hhcccCCCCCHHHHHHHHHHHHhcCCccc--cc---CCHHHHHHHHHHHhhcCCCeEEEeCChHHHH
Confidence 377788888653 22 289999999999998654321 21 2467788999999999988999999999999
Q ss_pred ccchhhcccc---C----CCc--eEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccc
Q psy16848 89 DSTLFTLGKM---I----PGL--HYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSM 159 (514)
Q Consensus 89 ~~~l~~l~~~---~----~gd--~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~ 159 (514)
+.|++..... + ++. .|.....+|.....++...+...... . |
T Consensus 146 e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~-~--------------------------~-- 196 (474)
T PLN02624 146 ETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATR-G--------------------------F-- 196 (474)
T ss_pred HHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccc-c--------------------------C--
Confidence 9999744321 0 123 34455566766665555433210000 0 0
Q ss_pred cCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEE
Q psy16848 160 TGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKII 239 (514)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~ 239 (514)
+ .....+..
T Consensus 197 --------------------------------~---------------------------------------~~~~~~~~ 205 (474)
T PLN02624 197 --------------------------------G---------------------------------------PLLPGHLK 205 (474)
T ss_pred --------------------------------C---------------------------------------CCCCCceE
Confidence 0 00012345
Q ss_pred ecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCcc-ccC
Q psy16848 240 YRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIG-ERD 314 (514)
Q Consensus 240 v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~-~~~ 314 (514)
++++|.+.+++.++.. .+++++|++++++|++|.++| +++|.++|++||+++|+||+|+ | +|+.|..+. ...
T Consensus 206 ~~~~d~~~l~~~l~~~-~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G-~GrtG~~~a~~~~ 282 (474)
T PLN02624 206 VDFGDLDALEKIFEED-GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-G-LARTGKMLACDWE 282 (474)
T ss_pred eCCCCHHHHHHHHHhC-CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-cCcCcchhhHHhc
Confidence 6677888888888743 356899999999999999988 9999999999999999999998 3 233333222 223
Q ss_pred CCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHH
Q psy16848 315 GQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDI 391 (514)
Q Consensus 315 ~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 391 (514)
+. .+|++ +++|.+|+.+ |+++.++++.+.+.+..... +.+.+++.++++.++|+.+.++. +.++..++
T Consensus 283 ~i--~pDiv--~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~--T~~g~pl~~aaa~aaLe~l~~~~---l~~~~~~~ 353 (474)
T PLN02624 283 EV--RPDVV--ILGKALGGGVIPVSAVLADKDVMLCIKPGEHGS--TFGGNPLASAVAMAALQVVQDEK---LAERSAKL 353 (474)
T ss_pred CC--CCCEE--EecccccCCCCcceeeeecHHHHhHhccCCcCC--CCCCCHHHHHHHHHHHHHHHhch---HHHHHHHH
Confidence 33 68888 6899998733 88888888887775443333 44688999999999999875444 56667777
Q ss_pred HHHHHHHHHhC--CCc----cccCCCcEEEEEeCCC----ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCC
Q psy16848 392 VAYLRNELIQI--GFP----VEHTPSHIIPIKIGNP----ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPF 461 (514)
Q Consensus 392 ~~~l~~~L~~~--g~~----~~~~~~~~~~i~l~~~----~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~ 461 (514)
.+++++.|+++ .++ .+.+.+.++.+.+... ....++++.|+ ++||.+.+. +.+.+||+++..
T Consensus 354 ~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~-e~GV~v~p~-------~~~~lR~~p~l~ 425 (474)
T PLN02624 354 GQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLK-ERGLLAKPT-------HDTIIRLAPPLS 425 (474)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHHH-hCCeEEecC-------CCCEEEEECCcc
Confidence 77777777664 222 2345666777777542 23567888885 899999753 356899999999
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy16848 462 HTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 462 ~t~e~id~~~~~l~~~l~~ 480 (514)
+|++++++++++|++++++
T Consensus 426 ~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 426 ISEDELQECSKALSDVLEH 444 (474)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998765
No 79
>PRK07550 hypothetical protein; Provisional
Probab=99.96 E-value=9.3e-27 Score=238.53 Aligned_cols=343 Identities=17% Similarity=0.127 Sum_probs=235.3
Q ss_pred CCceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC---CcEEEEecc-ccccc
Q psy16848 16 SNRVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK---EAGLVFTSC-YVAND 89 (514)
Q Consensus 16 ~g~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~---~~~i~~~sG-t~a~~ 89 (514)
.+...+|+..+. +...+.+.+++.+.+.. . ....+....|..++.+.+++++.+..|. +..+++++| ++++.
T Consensus 27 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 104 (386)
T PRK07550 27 ADGPLIDLSQAVPGYPPPPELLRALAEAAAD-P-AAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFW 104 (386)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhC-c-CCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 455688996544 33356788877776642 1 1122223346667777777777766552 234556666 55777
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.++.++.+ +||.|+++.+.|......++..|.+++.++....+
T Consensus 105 ~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~----------------------------------- 147 (386)
T PRK07550 105 AAMVTLAG--AGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGP----------------------------------- 147 (386)
T ss_pred HHHHHhcC--CCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCc-----------------------------------
Confidence 77777765 99999999999987776666666665544321000
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHH
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLT 249 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 249 (514)
+. ..|.+.++
T Consensus 148 -------------------------~~---------------------------------------------~~~~~~l~ 157 (386)
T PRK07550 148 -------------------------GL---------------------------------------------LPDPAAAE 157 (386)
T ss_pred -------------------------CC---------------------------------------------CCCHHHHH
Confidence 00 01334444
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC-CCCCccccCCCccCceEEEc
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE-HGAGIGERDGQLHNMDIISG 325 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~-~~~~~~~~~~~~~~~di~~~ 325 (514)
+.++ ++++++++++|+||||.+++ +++|.++|++||+++|+||+|.....+. ...+...... ..+..+++.
T Consensus 158 ~~~~----~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~-~~~~~i~~~ 232 (386)
T PRK07550 158 ALIT----PRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPD-WDDTLVHLY 232 (386)
T ss_pred HHhc----ccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCC-ccccEEEEe
Confidence 4443 45788888899999999998 7899999999999999999998433221 1111111111 124578899
Q ss_pred CCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 326 TLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 326 S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
||||.+|.+| ||+++++++++.+....... +.+.+...+.++...++.+ +.+.++.++.++++++.+.+.|++.
T Consensus 233 S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (386)
T PRK07550 233 SFSKSYALTGHRVGAVVASPARIAEIEKFMDTV--AICAPRIGQIAVAWGLPNL-ADWRAGNRAEIARRRDAFRAVFARL 309 (386)
T ss_pred cchhhccCcccceEeeecCHHHHHHHHHHHhhc--ccCCCcHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999998556 99999999988887665443 3356777777777777643 4566677888999999999999886
Q ss_pred -CCccccCCCcEEEEEeCC-CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 403 -GFPVEHTPSHIIPIKIGN-PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 403 -g~~~~~~~~~~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
++.+.+..+.++++.++. ..+..+++..|++++||.+.|+..+. ..+++++|++++ ..+++++++++++|.++
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~-~~~~~~iRis~~-~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 310 PGWELLASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFG-PGQEGYLRLAFA-NADVAGIGELVERLRAF 384 (386)
T ss_pred CCceeCCCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhC-CCCCCEEEEEee-cCCHHHHHHHHHHHHhh
Confidence 655444444567777775 55688999988667899999988653 334679999997 45689999999998864
No 80
>PRK07337 aminotransferase; Validated
Probab=99.96 E-value=1.4e-26 Score=237.35 Aligned_cols=341 Identities=14% Similarity=0.099 Sum_probs=230.2
Q ss_pred CCceeeecccC--CCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----CcEEEEeccccccc
Q psy16848 16 SNRVTCRLSSV--QYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EAGLVFTSCYVAND 89 (514)
Q Consensus 16 ~g~~~~d~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~i~~~sGt~a~~ 89 (514)
.+..++|+..+ ++...|.+.+++.+.+.... ..+....|..++.+.+.+.+.+.+|. ++.++++++++|+.
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~ 104 (388)
T PRK07337 28 AGRDIIHMGIGEPDFTAPEPVVEAAARALRRGV---TQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALL 104 (388)
T ss_pred cCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHH
Confidence 34567777543 34446788888888776311 11112234445555555555544442 34455555566777
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.++.++.. +||.|+++.++|......++..|++++.++.+.
T Consensus 105 ~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~------------------------------------- 145 (388)
T PRK07337 105 LACLALVE--RGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGP------------------------------------- 145 (388)
T ss_pred HHHHHhcC--CCCEEEEeCCCchhhHHHHHHcCCEEEEeecCC-------------------------------------
Confidence 77777765 999999999999988777666666655443210
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHH
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLT 249 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 249 (514)
.+++....
T Consensus 146 ------------------------------------------------------------------------~~~~~~~~ 153 (388)
T PRK07337 146 ------------------------------------------------------------------------AERFQLTA 153 (388)
T ss_pred ------------------------------------------------------------------------ccCCcCCH
Confidence 00111222
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcC
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGT 326 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S 326 (514)
+.+++...++++++++++|+||||.+++ +++|.++|+++++++|+||+|..........++. .. .+..+++.|
T Consensus 154 ~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~---~~-~~~vi~~~S 229 (388)
T PRK07337 154 ADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSAL---SL-GDDVITINS 229 (388)
T ss_pred HHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChh---hc-cCCEEEEEe
Confidence 3333333456899999999999999998 6888999999999999999998322221111111 11 234678899
Q ss_pred CcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCC
Q psy16848 327 LGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIG 403 (514)
Q Consensus 327 ~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 403 (514)
|||.+|.+| ||+++++++++.+......+ ..+.+.+.+.++..+++.-......+.++.++++++++.+.|++.+
T Consensus 230 ~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~ 307 (388)
T PRK07337 230 FSKYFNMTGWRLGWLVVPEALVGTFEKLAQNL--FICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLG 307 (388)
T ss_pred chhhcCCchhheeeeecCHHHHHHHHHHHHHh--ccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999998768 99999999998887765444 2355677777777766521113356678888999999999999987
Q ss_pred Ccc-ccC-CCcEEEEEeCCC-----ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 404 FPV-EHT-PSHIIPIKIGNP-----ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 404 ~~~-~~~-~~~~~~i~l~~~-----~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
+.+ ..+ .+.+++++++.. .+..++++.+++++||.+.|+..+....+.+++|++++. +++++++++++|.+
T Consensus 308 ~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~--~~~~l~~~l~rl~~ 385 (388)
T PRK07337 308 FKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT--SMSRLEEAVARLGK 385 (388)
T ss_pred CccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 664 234 455777887641 356788888767899999999876544456899999994 68889999988887
Q ss_pred HH
Q psy16848 477 VW 478 (514)
Q Consensus 477 ~l 478 (514)
++
T Consensus 386 ~l 387 (388)
T PRK07337 386 LF 387 (388)
T ss_pred Hh
Confidence 54
No 81
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=8.1e-27 Score=241.83 Aligned_cols=340 Identities=19% Similarity=0.234 Sum_probs=238.0
Q ss_pred eeeecccCCCCCChhHHHHHHHHHHHhCCCCCC-cCcc-cCcchHHHHHHHHHHhHcCCC---cEEEEeccccccccchh
Q psy16848 19 VTCRLSSVQYKVPKGGRKCLGEALEKFGTGAGG-TRNI-SGNSLFHEKLEEDVAKLHQKE---AGLVFTSCYVANDSTLF 93 (514)
Q Consensus 19 ~~~d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~la~~~~~~---~~i~~~sGt~a~~~~l~ 93 (514)
.|.|.++.. ..++.+.+++.+.+..+..+..+ .... ....+..+++++.+++++|.+ ..++++|+|+++..++.
T Consensus 34 iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~ 112 (424)
T PLN02855 34 VYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAY 112 (424)
T ss_pred EEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHH
Confidence 455554443 23567899998888765433222 1111 112345678999999999873 34555566777666665
Q ss_pred hcc--ccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhh
Q psy16848 94 TLG--KMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCE 171 (514)
Q Consensus 94 ~l~--~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (514)
.+. ...+||.|++..++|.+....++
T Consensus 113 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~---------------------------------------------------- 140 (424)
T PLN02855 113 TWGLANLKPGDEVILSVAEHHSNIVPWQ---------------------------------------------------- 140 (424)
T ss_pred HhhhhcCCCcCEEEECCCccHHHHHHHH----------------------------------------------------
Confidence 431 23489999999999988753321
Q ss_pred hhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-----CChh
Q psy16848 172 VSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-----NDVN 246 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-----~d~~ 246 (514)
......|++++.++. .+.+
T Consensus 141 --------------------------------------------------------~~a~~~g~~v~~v~~~~~~~~~~~ 164 (424)
T PLN02855 141 --------------------------------------------------------LVAQKTGAVLKFVGLTPDEVLDVE 164 (424)
T ss_pred --------------------------------------------------------HHHHHcCCEEEEEecCCCCCcCHH
Confidence 111222334444431 1333
Q ss_pred HHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcC
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGT 326 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S 326 (514)
.+++.+ ++++++|++++++|+||.++|+++|.++|+++|+++++|++|+.|.. +......++|++++|
T Consensus 165 ~l~~~i----~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~--------~~~~~~~~~d~~~~s 232 (424)
T PLN02855 165 QLKELL----SEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHM--------PVDVQTLGADFLVAS 232 (424)
T ss_pred HHHHHh----ccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCc--------CCCchhcCCCEEEee
Confidence 444443 45789999999999999999999999999999999999999986543 111113468999999
Q ss_pred CcccccCCC-eEEEecHHHHHHHHhhcCce------------------Eec-cCCcHHHHHHHHHHHHHhhhchHHHHHH
Q psy16848 327 LGKAFGNIG-GYIVGTKNFIDTIRSYAAGF------------------IFT-TSLPPTVLAGAREAIRILSSQEGVELRA 386 (514)
Q Consensus 327 ~sK~lg~~G-G~l~~~~~~~~~l~~~~~~~------------------~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 386 (514)
+||.+|+.| |+++.++++++.+.....+. .|. .+.+....+++.++++++.+.+++++++
T Consensus 233 ~~K~~gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~ 312 (424)
T PLN02855 233 SHKMCGPTGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHE 312 (424)
T ss_pred cccccCCCccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 999888877 99999998887765432110 011 1345566777888888887778899999
Q ss_pred HHHHHHHHHHHHHHhC-CCccccC-------CCcEEEEEeCCCccHHHHHHHHHHhC-CeEEecccCCCCC-----CCCc
Q psy16848 387 KHQDIVAYLRNELIQI-GFPVEHT-------PSHIIPIKIGNPALNTKICDMLLKEK-GHYVQPINYPTVP-----VGEE 452 (514)
Q Consensus 387 ~~~~~~~~l~~~L~~~-g~~~~~~-------~~~~~~i~l~~~~~~~~~~~~Ll~~~-GI~v~~~~~~~~~-----~~~~ 452 (514)
+..++.+++.+.|+++ ++.+..+ .++++.+.++. ....++.+.|. ++ ||.++.+..|..+ .-+.
T Consensus 313 ~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~-~~~~~v~~~L~-~~~gI~v~~g~~c~~~~~~~~g~~~ 390 (424)
T PLN02855 313 YEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEG-IHPTDLSTFLD-QQHGVAIRSGHHCAQPLHRYLGVNA 390 (424)
T ss_pred HHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECC-cCHHHHHHHhc-ccCCEEEechhhhhHHHHHHhCCCC
Confidence 9999999999999887 7766532 23577788764 34678888885 66 9999987765321 1146
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 453 KIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 453 ~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
++|+|++.++|++|++++++.|+++++.+
T Consensus 391 ~iRiS~~~ynt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 391 SARASLYFYNTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred eEEEEeccCCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999988764
No 82
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.9e-26 Score=237.31 Aligned_cols=344 Identities=15% Similarity=0.144 Sum_probs=238.7
Q ss_pred CCceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC---cEEEEecc-ccccc
Q psy16848 16 SNRVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE---AGLVFTSC-YVAND 89 (514)
Q Consensus 16 ~g~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~---~~i~~~sG-t~a~~ 89 (514)
+|...+|+..+. +..+|.+.+++.+.+... ...+....|..++.+++++.+++.+|.+ ..+++++| ++|+.
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 107 (402)
T PRK06107 31 AGRSIVDLTVGEPDFDTPDHIKQAAVAAIERG---ETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIF 107 (402)
T ss_pred ccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 455678885433 223678888888888642 1223334567788888888888887653 23556665 67777
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.++.++.. +||.|++++++|......+...+..++.++...
T Consensus 108 ~~~~~~~~--~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~------------------------------------- 148 (402)
T PRK06107 108 LALMATLE--AGDEVIIPAPYWVSYPDMVLANDGTPVIVACPE------------------------------------- 148 (402)
T ss_pred HHHHHhcC--CCCEEEEecCCCcCHHHHHHHcCCEEEEecCCc-------------------------------------
Confidence 77777755 999999999977665544444444333221100
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHH
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLT 249 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 249 (514)
.+++....
T Consensus 149 ------------------------------------------------------------------------~~~~~~~~ 156 (402)
T PRK06107 149 ------------------------------------------------------------------------EQGFKLTP 156 (402)
T ss_pred ------------------------------------------------------------------------ccCCCCCH
Confidence 01121222
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHc-CCEEEEecccccccc-CCCCCCccccCCCccCceEEE
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQH-GALTFVDEVHAVGLY-GEHGAGIGERDGQLHNMDIIS 324 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~-gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~~di~~ 324 (514)
+.+++...++++++++++|+||||.+++ +++|+++|+++ ++++|+||+|....+ +....++........+..+++
T Consensus 157 ~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~ 236 (402)
T PRK06107 157 EALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVT 236 (402)
T ss_pred HHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEE
Confidence 3333333456889999999999999998 68888889998 999999999984332 222222222111112578999
Q ss_pred cCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy16848 325 GTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQ 401 (514)
Q Consensus 325 ~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 401 (514)
+||||.++.+| ||+++++++++.+....... +.+.+.+.+.++...|+.. ..++++.++.++++++.+.+.|++
T Consensus 237 ~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~ 313 (402)
T PRK06107 237 NGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQS--SSCPSSISQAAAAAALNGD-QSFVTESVAVYKQRRDYALALLNA 313 (402)
T ss_pred eccchhhcCcccceeeeecCHHHHHHHHHHHHhc--ccCCChHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999998668 99999999999888766444 3367888888888888532 346677888899999999999988
Q ss_pred C-CCccccCCCc-EEEEEeC--------CC---ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHH
Q psy16848 402 I-GFPVEHTPSH-IIPIKIG--------NP---ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMID 468 (514)
Q Consensus 402 ~-g~~~~~~~~~-~~~i~l~--------~~---~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id 468 (514)
. |+.+..+.++ +++++++ .. .+..+++..+++++||.+.|+..+.. .+++|++++ .++++++
T Consensus 314 ~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~---~~~iRis~~--~~~e~l~ 388 (402)
T PRK06107 314 IPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL---SPYFRLSIA--TSLETLE 388 (402)
T ss_pred CCCCcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCC---CCeEEEEeC--CCHHHHH
Confidence 7 7777666665 4556652 11 13567787777789999999987542 469999999 4789999
Q ss_pred HHHHHHHHHHHHc
Q psy16848 469 KFVTDLLAVWKSL 481 (514)
Q Consensus 469 ~~~~~l~~~l~~~ 481 (514)
+++++|+++++++
T Consensus 389 ~~l~~l~~~l~~~ 401 (402)
T PRK06107 389 EACARIERAVAAL 401 (402)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988765
No 83
>PRK07482 hypothetical protein; Provisional
Probab=99.96 E-value=1.5e-26 Score=240.08 Aligned_cols=371 Identities=14% Similarity=0.082 Sum_probs=237.5
Q ss_pred CCceeeecccCCC---C--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSVQY---K--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~~~---~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|++|+||.+.-+ + +||+|.+++.+|+++....... .....+...++.+++++.+. .++++|++||++|+
T Consensus 48 dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~---~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAv 124 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTY---VGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDAN 124 (461)
T ss_pred CCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccc---cccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHH
Confidence 6677777754322 2 3899999999999984321111 11235778899999999873 56788999999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
+.|++.... | .-.+..++|+++|.+++.||...
T Consensus 125 e~AlKlAr~-------------~---------------------------~~~~g~~~r~~Ii~~~~~YHG~t------- 157 (461)
T PRK07482 125 ETQIKLVWY-------------Y---------------------------NNVLGRPEKKKIISRWRGYHGSG------- 157 (461)
T ss_pred HHHHHHHHH-------------H---------------------------HHhcCCCCCceEEEecCccCCcc-------
Confidence 999965432 0 00012245678888888887211
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
.|...-.+. .........+.....-++.++.......+.....+...+.+.+
T Consensus 158 -------------------~ga~s~~~~---------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 209 (461)
T PRK07482 158 -------------------VVTGSLTGL---------SLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADEL 209 (461)
T ss_pred -------------------HhhhhccCC---------chhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHH
Confidence 000000000 0000000000000000000100000000000000001134566
Q ss_pred HHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCceEE
Q psy16848 249 TQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMDII 323 (514)
Q Consensus 249 ~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~di~ 323 (514)
++.+.+...+++++|+++++++..|.+.+ +++|+++|++||+++|.||+++ +|+.|+.+ ..+.+++ .||++
T Consensus 210 ~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~--a~~~~gv--~PDiv 285 (461)
T PRK07482 210 EELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMF--GSDHYGI--EPDLI 285 (461)
T ss_pred HHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchh--hHHhcCC--CCCEE
Confidence 77775444467899999999999898876 8999999999999999999999 77776543 2244555 89999
Q ss_pred EcCCcccccCCC----eEEEecHHHHHHHHhhc-----CceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q psy16848 324 SGTLGKAFGNIG----GYIVGTKNFIDTIRSYA-----AGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAY 394 (514)
Q Consensus 324 ~~S~sK~lg~~G----G~l~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 394 (514)
+++|++++ | |.+++++++.+.+.... ...+.+++.+++.++++.++|+.+.++. +.++.+++.++
T Consensus 286 --~~gKgl~g-G~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~---l~~~~~~~g~~ 359 (461)
T PRK07482 286 --TVAKGLTS-AYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILEREN---LVGNAAEVGAY 359 (461)
T ss_pred --EEcccccc-CccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHH
Confidence 89999976 3 66778888877765321 1122356889999999999999987665 67778888888
Q ss_pred HHHHHHhC--CCcc---ccCCCcEEEEEeCCCc-----------cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEe
Q psy16848 395 LRNELIQI--GFPV---EHTPSHIIPIKIGNPA-----------LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAP 458 (514)
Q Consensus 395 l~~~L~~~--g~~~---~~~~~~~~~i~l~~~~-----------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~ 458 (514)
+.+.|+++ ..+. +...|.++.+++.... ....+...++ ++||++.+.. ..+.+|+.+
T Consensus 360 l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~~------~~~~i~~~P 432 (461)
T PRK07482 360 FRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAAL-ERGVIARAMP------HGDILGFAP 432 (461)
T ss_pred HHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHH-HCCcEEecCC------CCCEEEEeC
Confidence 88888764 3332 3446678888874211 1356778886 8999985321 135899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 459 TPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 459 ~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+..+|++|+++++++++++++++
T Consensus 433 pl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 433 PLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998764
No 84
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.96 E-value=6.2e-27 Score=242.25 Aligned_cols=340 Identities=23% Similarity=0.209 Sum_probs=236.3
Q ss_pred cCCceeeecccC-C--CCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEeccccc
Q psy16848 15 KSNRVTCRLSSV-Q--YKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVA 87 (514)
Q Consensus 15 ~~g~~~~d~~~~-~--~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a 87 (514)
.+|+.++||.++ . .++ ||++.+++.+++.+... ... ..+..+...+++++++++++ .+++++++||++|
T Consensus 33 ~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~---~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea 108 (413)
T cd00610 33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTH-FSL---GFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEA 108 (413)
T ss_pred CCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcC-ccC---cccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHH
Confidence 378899999763 2 343 89999999999976321 111 11356889999999999998 7788999999999
Q ss_pred cccchhhccccCCCceEEec-CccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccch
Q psy16848 88 NDSTLFTLGKMIPGLHYISD-AGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPL 166 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd~v~~~-~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (514)
+..++..+....+++.|++. ..+|.+...++...+..... . .+.
T Consensus 109 ~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~--~-------------------------~~~-------- 153 (413)
T cd00610 109 VEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYR--G-------------------------GFG-------- 153 (413)
T ss_pred HHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCcccc--c-------------------------cCC--------
Confidence 99999876433356666655 45666666555544332100 0 000
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCC---
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHN--- 243 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~--- 243 (514)
....+++.++.+
T Consensus 154 -----------------------------------------------------------------~~~~~~~~~~~~~~~ 168 (413)
T cd00610 154 -----------------------------------------------------------------PLLPGVLHVPYPYRY 168 (413)
T ss_pred -----------------------------------------------------------------CCCCCcEEeCCCccc
Confidence 001112223322
Q ss_pred --------ChhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCc
Q psy16848 244 --------DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGI 310 (514)
Q Consensus 244 --------d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~ 310 (514)
|.+.+++.+++. .++++++++++++|++|..++ +++|.++|++||+++|+||+|+ +|..+... .
T Consensus 169 ~~~~~~~~d~~~l~~~l~~~-~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~--~ 245 (413)
T cd00610 169 RPPAELADDLEALEEALEEH-PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMF--A 245 (413)
T ss_pred cchhhHHHHHHHHHHHHhcC-CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh--h
Confidence 556666666543 235789999999999999887 9999999999999999999998 33333211 1
Q ss_pred cccCCCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHH
Q psy16848 311 GERDGQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAK 387 (514)
Q Consensus 311 ~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 387 (514)
.+..+. .+|++ |++|++++ | |++++++++++.+.........+.+.+++.++++.++++.+.++ ++.++
T Consensus 246 ~~~~~~--~~d~~--t~sK~l~~-g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~---~~~~~ 317 (413)
T cd00610 246 FEHFGV--EPDIV--TLGKGLGG-GLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEE---GLLEN 317 (413)
T ss_pred HhhcCC--CCCeE--EEcccccC-ccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhc---cHHHH
Confidence 222332 56777 88999987 4 88899999988862111122224577888999999999887553 47788
Q ss_pred HHHHHHHHHHHHHhCCC--cc---ccCCCcEEEEEeCCC--------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEE
Q psy16848 388 HQDIVAYLRNELIQIGF--PV---EHTPSHIIPIKIGNP--------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKI 454 (514)
Q Consensus 388 ~~~~~~~l~~~L~~~g~--~~---~~~~~~~~~i~l~~~--------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~i 454 (514)
++++.+++.+.|+++.. +. ..+.++++++.+++. .....+.+.|+ ++||.+.++. .+.+
T Consensus 318 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~v~~~~-------~~~l 389 (413)
T cd00610 318 AAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAAL-ERGLLLRPSG-------GNVI 389 (413)
T ss_pred HHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHH-HCCeEEeecC-------CCEE
Confidence 88888888888877621 22 234567888887653 34677888886 8999998653 4589
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 455 RLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 455 Rl~~~~~~t~e~id~~~~~l~~~ 477 (514)
|++++..+|++++++++++++++
T Consensus 390 R~~~~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 390 RLLPPLIITEEEIDEGLDALDEA 412 (413)
T ss_pred EEECCCcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999875
No 85
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=5.5e-27 Score=237.93 Aligned_cols=320 Identities=16% Similarity=0.096 Sum_probs=229.2
Q ss_pred eeeecccCCCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-cEEEEecc-ccccccchhh
Q psy16848 19 VTCRLSSVQYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-AGLVFTSC-YVANDSTLFT 94 (514)
Q Consensus 19 ~~~d~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~i~~~sG-t~a~~~~l~~ 94 (514)
..+|+..+.+. .+|.+.+++.+.++..... ......++++.++++++.+ ..+++++| ++++..++.+
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~~---------p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~ 100 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDELALY---------PDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRA 100 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHHhhcC---------CCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHH
Confidence 57888765433 4788999988887653211 1123567888888888753 34555555 4556666666
Q ss_pred ccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhh
Q psy16848 95 LGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSH 174 (514)
Q Consensus 95 l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (514)
+.. +||.|+++.++|......+...|.+++.++..+.
T Consensus 101 ~~~--~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~----------------------------------------- 137 (359)
T PRK03158 101 LLN--PGTNTVMAEPTFSQYRHNAIIEGAEVREVPLKDG----------------------------------------- 137 (359)
T ss_pred HhC--CCCEEEEcCCCHHHHHHHHHHcCCeEEEEecCCC-----------------------------------------
Confidence 655 9999999999998877666655655544332100
Q ss_pred hcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhh
Q psy16848 175 QHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLEN 254 (514)
Q Consensus 175 ~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~ 254 (514)
..|.+.+++.
T Consensus 138 -------------------------------------------------------------------~~d~~~l~~~--- 147 (359)
T PRK03158 138 -------------------------------------------------------------------GHDLEAMLKA--- 147 (359)
T ss_pred -------------------------------------------------------------------CcCHHHHHHh---
Confidence 0133333333
Q ss_pred ccCCCceEEEEecCCCCCccccCHHHHHHHHHH--cCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc
Q psy16848 255 MDVKIPKLVAFETVHSMTGAICPLKELCEVSHQ--HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG 332 (514)
Q Consensus 255 ~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~--~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg 332 (514)
.+++++++++++|+||||.+++.++|.++++. +|+++|+||+|.....+........... ..+.+++++||||.+|
T Consensus 148 -~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~g 225 (359)
T PRK03158 148 -IDEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLE-KYENLIVLRTFSKAYG 225 (359)
T ss_pred -cCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHH-hcCCEEEEEechHhhc
Confidence 33468899999999999999999999998887 5999999999985443221111111111 2256899999999999
Q ss_pred CCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccC
Q psy16848 333 NIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHT 409 (514)
Q Consensus 333 ~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 409 (514)
.+| ||+++++++++.+......+ +.+.+.+.++.++++. ..+.++.++.++++++++.+.|++.++.+.++
T Consensus 226 ~~GlRiG~~v~~~~~~~~~~~~~~~~----~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 299 (359)
T PRK03158 226 LAALRVGYGIASEELIEKLNIARPPF----NTTRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEYGLFYYPS 299 (359)
T ss_pred CcchhhehhcCCHHHHHHHHHhcCCC----CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeeCCC
Confidence 778 99999999999887765432 5688888888888862 34556677778888888999998888777667
Q ss_pred CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 410 PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 410 ~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
.+.++++.++ .+..++++.|+ ++||.+.++..+. .++++|++++ +.+++++++++|+++
T Consensus 300 ~g~~i~~~~~--~~~~~~~~~l~-~~gv~v~~g~~f~---~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 300 QTNFIFVDTG--RDANELFEALL-KKGYIVRSGAALG---FPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred cCcEEEEECC--CCHHHHHHHHH-HCCeEEeeCCCCC---CCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 7778777774 24678999996 8999999988653 2579999998 899999999999875
No 86
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.2e-26 Score=238.17 Aligned_cols=341 Identities=16% Similarity=0.171 Sum_probs=236.3
Q ss_pred ceeeecccCCCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----CcEEEEeccccccccc
Q psy16848 18 RVTCRLSSVQYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EAGLVFTSCYVANDST 91 (514)
Q Consensus 18 ~~~~d~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~i~~~sGt~a~~~~ 91 (514)
..++|+..++.. .++.+.+++.+.+... ...+....|..++.+++++.+.+.+|. ++.++++++++++..+
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 109 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEG---WTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLA 109 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcC---CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHH
Confidence 346888654322 3567788877776541 111212234455555555555444442 3455556667788888
Q ss_pred hhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhh
Q psy16848 92 LFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCE 171 (514)
Q Consensus 92 l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (514)
+.++.. +||.|+++.++|......++..|.+++.++.+...
T Consensus 110 ~~~l~~--~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~------------------------------------- 150 (391)
T PRK08361 110 FESLLE--EGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREEN------------------------------------- 150 (391)
T ss_pred HHHhcC--CCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCcc-------------------------------------
Confidence 877765 99999999999999887777777776655431000
Q ss_pred hhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHH
Q psy16848 172 VSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQV 251 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~ 251 (514)
+. ..|.+.+++.
T Consensus 151 -----------------------~~---------------------------------------------~~d~~~l~~~ 162 (391)
T PRK08361 151 -----------------------EF---------------------------------------------QPDPDELLEL 162 (391)
T ss_pred -----------------------CC---------------------------------------------CCCHHHHHHh
Confidence 00 0133444443
Q ss_pred HhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCccCceEEEcCC
Q psy16848 252 LENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLHNMDIISGTL 327 (514)
Q Consensus 252 l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~~di~~~S~ 327 (514)
+ .++++++++++|+||||.++| +++|.++|+++++++|+||+|..... +....++. ....+.+++++||
T Consensus 163 i----~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~---~~~~~~~i~~~s~ 235 (391)
T PRK08361 163 I----TKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMI---KYAPDNTILANSF 235 (391)
T ss_pred c----ccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHh---hcCCCCEEEEecC
Confidence 3 345789999999999999999 89999999999999999999984432 22211221 1123578999999
Q ss_pred cccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHHhC-
Q psy16848 328 GKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSS-QEGVELRAKHQDIVAYLRNELIQI- 402 (514)
Q Consensus 328 sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~- 402 (514)
||.+|.+| ||+++++++++.+....... ..+.+...+.++..+++.... .++++.++.++++++.+.+.|++.
T Consensus 236 SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 313 (391)
T PRK08361 236 SKTFAMTGWRLGFVIAPEQVIKDMIKLHAYI--IGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMP 313 (391)
T ss_pred chhcCCcHhhhhhhccCHHHHHHHHHHHhhh--ccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999768 99999999988876654332 225567777777777753211 346788888999999999999987
Q ss_pred CCccccCCCc-EEEEEeCC-CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 403 GFPVEHTPSH-IIPIKIGN-PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 403 g~~~~~~~~~-~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
++.+..+.++ ++++.++. ..+..++++.|++++||.+.|+..+. ..+++++|++++ .+++++++++++|++++++
T Consensus 314 ~~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~-~~~~~~iRi~~~--~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 314 HIKVFEPKGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFG-KAGEGYIRISYA--TSKEKLIEAMERMEKALEE 390 (391)
T ss_pred CCeecCCCEEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhC-CCCCCEEEEEec--CCHHHHHHHHHHHHHHHhc
Confidence 7777677665 56677764 34678898888756899999988643 334679999998 4678999999999988764
No 87
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.96 E-value=1.7e-26 Score=237.33 Aligned_cols=340 Identities=15% Similarity=0.112 Sum_probs=233.0
Q ss_pred CCceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-----cEEEEecc-ccc
Q psy16848 16 SNRVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-----AGLVFTSC-YVA 87 (514)
Q Consensus 16 ~g~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~i~~~sG-t~a 87 (514)
.|..++|+..++ +..++.+.+++.+.+.. ...+....|..++.+.+.+++.+.+|.+ ..+++++| +++
T Consensus 27 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~----~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~a 102 (396)
T PRK09147 27 ADLPPISLSIGEPKHPTPAFIKDALAANLDG----LASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREA 102 (396)
T ss_pred cCCCeEecCCCCCCCCCCHHHHHHHHHHhhh----hcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHH
Confidence 467889986543 23356788887776542 1222223455667777777776665632 24555555 556
Q ss_pred cccchhhccccCC---CceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCcc
Q psy16848 88 NDSTLFTLGKMIP---GLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAIC 164 (514)
Q Consensus 88 ~~~~l~~l~~~~~---gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (514)
+..++.++.. + ||.|+++.+.|......++..|.+++.++... +
T Consensus 103 l~~~~~~l~~--~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~-~------------------------------ 149 (396)
T PRK09147 103 LFAFAQTVID--RDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDP-A------------------------------ 149 (396)
T ss_pred HHHHHHHHcC--CCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCc-c------------------------------
Confidence 7777777766 7 99999999999887766666666665543210 0
Q ss_pred chhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCC
Q psy16848 165 PLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHND 244 (514)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d 244 (514)
++.+ .|
T Consensus 150 -----------------------------~~~~---------------------------------------------~d 155 (396)
T PRK09147 150 -----------------------------NNFA---------------------------------------------PD 155 (396)
T ss_pred -----------------------------ccCc---------------------------------------------cC
Confidence 0000 13
Q ss_pred hhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCc--cc---cCCC
Q psy16848 245 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGI--GE---RDGQ 316 (514)
Q Consensus 245 ~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~--~~---~~~~ 316 (514)
.+.+++.+. ++++++++++||||||.+++ +++|.++|++|++++|+||+|....+....... .. ..+.
T Consensus 156 ~~~l~~~~~----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 231 (396)
T PRK09147 156 FDAVPAEVW----ARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGR 231 (396)
T ss_pred HHHHHHHHh----hccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCc
Confidence 344444332 35889999999999999999 788899999999999999999954332211111 10 0110
Q ss_pred -ccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHH
Q psy16848 317 -LHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIV 392 (514)
Q Consensus 317 -~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 392 (514)
..+..++++||||.++.+| ||+++++++++.+....... +.+.+...+.++.+.+. ...++.+.++.+++++
T Consensus 232 ~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~~~--~~~~~~~~q~a~~~~~~--~~~~~~~~~~~~~~~~ 307 (396)
T PRK09147 232 DDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLLYRTYH--GCAMPPAVQAASIAAWN--DEAHVRENRALYREKF 307 (396)
T ss_pred cccccEEEEeccccccCCccceeeeecCCHHHHHHHHHHhhhc--ccCCCHHHHHHHHHHhc--chhHHHHHHHHHHHHH
Confidence 1256799999999998878 99999999998887655333 33567777777666664 2456777888899999
Q ss_pred HHHHHHHHhCCCccccC-CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCC-----CCCCcEEEEEeCCCCCHHH
Q psy16848 393 AYLRNELIQIGFPVEHT-PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTV-----PVGEEKIRLAPTPFHTREM 466 (514)
Q Consensus 393 ~~l~~~L~~~g~~~~~~-~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~-----~~~~~~iRl~~~~~~t~e~ 466 (514)
+.+.+.|++. +.+..+ .+.+++++++ .+..++++.|++++||.+.|+..+.. ..+.+++|++++ .++++
T Consensus 308 ~~~~~~L~~~-~~~~~p~~g~f~~~~~~--~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~--~~~~~ 382 (396)
T PRK09147 308 DAVTPILAPV-LDVQLPDAGFYLWAKVP--GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV--APLAE 382 (396)
T ss_pred HHHHHHHHHh-cCCCCCCeeEEEEEECC--CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEec--CCHHH
Confidence 9999999885 554434 4557778877 34678888886678999999986432 234679999998 36888
Q ss_pred HHHHHHHHHHHHH
Q psy16848 467 IDKFVTDLLAVWK 479 (514)
Q Consensus 467 id~~~~~l~~~l~ 479 (514)
+++++++|+++++
T Consensus 383 l~~~l~rl~~~~~ 395 (396)
T PRK09147 383 CVEAAERIVDFCR 395 (396)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988763
No 88
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.96 E-value=1.4e-26 Score=233.99 Aligned_cols=331 Identities=18% Similarity=0.135 Sum_probs=231.3
Q ss_pred eeecccCCC-CC-ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--C-Cc-EEEEeccc-cccccch
Q psy16848 20 TCRLSSVQY-KV-PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--K-EA-GLVFTSCY-VANDSTL 92 (514)
Q Consensus 20 ~~d~~~~~~-~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~-~~-~i~~~sGt-~a~~~~l 92 (514)
++||...+. ++ .|++.+++.+.... ...+....|..++.+.+.+.+.+..| . +. .+++|+|+ +++..++
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~----~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~ 77 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVPE----VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFP 77 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHhc----cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHH
Confidence 567754332 22 56788887776532 11222233555666666666665545 2 22 46666665 5666666
Q ss_pred hhccccCCC---ceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 93 FTLGKMIPG---LHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 93 ~~l~~~~~g---d~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.+++. +| |.|+++.+.|......++..|.+++.++....+
T Consensus 78 ~~~~~--~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~----------------------------------- 120 (350)
T TIGR03537 78 LVFID--PEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKED----------------------------------- 120 (350)
T ss_pred HHHcC--CCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCccc-----------------------------------
Confidence 66665 65 799999999999888888888777765431000
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHH
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLT 249 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 249 (514)
+. .-|.+.++
T Consensus 121 -------------------------~~---------------------------------------------~~d~~~l~ 130 (350)
T TIGR03537 121 -------------------------GF---------------------------------------------LLRLEKVE 130 (350)
T ss_pred -------------------------CC---------------------------------------------ccCHHHHH
Confidence 00 00334444
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcC
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGT 326 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S 326 (514)
+.+. ++++++++++|+||||.+++ +++|.++|+++|+++|+||+|.....+....++. ....+.++++.|
T Consensus 131 ~~~~----~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~---~~~~~~~i~~~s 203 (350)
T TIGR03537 131 KSIL----EETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSAL---EVGIENVLAFHS 203 (350)
T ss_pred Hhhh----hccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchh---hcCcCCEEEEee
Confidence 4443 35789999999999999999 8999999999999999999998544433221111 112356899999
Q ss_pred CcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCC
Q psy16848 327 LGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIG 403 (514)
Q Consensus 327 ~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 403 (514)
|||.+|.+| ||+++++++++.+......+ +.+.+...+.++.+++. ...++.+.+++++++.+.+.+.|++.|
T Consensus 204 ~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~--~~~~~~~~r~~l~~~~~~~~~~l~~~g 279 (350)
T TIGR03537 204 LSKRSGMTGYRSGFVAGDEKLISFLRKLRANF--GVASPDFVQAAAKAAWS--DDNHVLERRKIFKRKRDLFIEFFNKVG 279 (350)
T ss_pred cccccCCccccceeeecCHHHHHHHHHHHHhh--ccCCCHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998777 99999999999888765554 33555566666666654 234567788889999999999999988
Q ss_pred CccccCCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 404 FPVEHTPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 404 ~~~~~~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
+.+..+.++ ++++.+++..+..++++.|. ++||.+.++..+. ....+++|+++. .++++++++++++++
T Consensus 280 ~~~~~~~g~~~~~~~~~~~~~~~~l~~~L~-~~gv~v~~g~~f~-~~~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 280 LEYLYPDATFYLWVKVPSGIDAKDYALRLL-ENGIVVAPGENFG-SGEEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred CcccCCCeEEEEEEECCCCCCHHHHHHHHH-HCCEEEcCchhhC-CCCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 877666655 56788876556789999996 7999999988653 233679999986 578899999988864
No 89
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.96 E-value=3.1e-26 Score=218.93 Aligned_cols=334 Identities=16% Similarity=0.151 Sum_probs=250.0
Q ss_pred CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC---CcEEEEecc-ccccccchhhccccCCCce
Q psy16848 28 YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK---EAGLVFTSC-YVANDSTLFTLGKMIPGLH 103 (514)
Q Consensus 28 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~---~~~i~~~sG-t~a~~~~l~~l~~~~~gd~ 103 (514)
+...|+|.+|+.+.+++--+++ .++..++.+++..+.++..+. +..++++.| -.++..++.++.+ +||.
T Consensus 37 f~~pp~i~~Al~~rvdhGvfGY-----~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~--~gd~ 109 (388)
T COG1168 37 FPTPPEIIEALRERVDHGVFGY-----PYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTK--PGDG 109 (388)
T ss_pred CCCCHHHHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCc--CCCe
Confidence 3347999999999999732332 245667888999999988762 345555544 5578888888866 9999
Q ss_pred EEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEee
Q psy16848 104 YISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVD 183 (514)
Q Consensus 104 v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (514)
|++..|.|......++..|.+++..+-. .-+|.|.
T Consensus 110 Vvi~tPvY~PF~~~i~~n~R~~i~~pL~--------------------~~~~~y~------------------------- 144 (388)
T COG1168 110 VVIQTPVYPPFYNAIKLNGRKVIENPLV--------------------EDDGRYE------------------------- 144 (388)
T ss_pred eEecCCCchHHHHHHhhcCcEEEecccc--------------------ccCCcEE-------------------------
Confidence 9999999999999999888877754321 0111111
Q ss_pred ccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEE
Q psy16848 184 EVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLV 263 (514)
Q Consensus 184 ~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v 263 (514)
-|++.+++.+... +++++
T Consensus 145 -----------------------------------------------------------iD~~~LE~~~~~~---~vkl~ 162 (388)
T COG1168 145 -----------------------------------------------------------IDFDALEKAFVDE---RVKLF 162 (388)
T ss_pred -----------------------------------------------------------ecHHHHHHHHhcC---CccEE
Confidence 1677777777653 46899
Q ss_pred EEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCccCceEEEcCCcccccCCC---e
Q psy16848 264 AFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---G 336 (514)
Q Consensus 264 v~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G 336 (514)
+++|||||+|.+++ |.+|.++|.+||+.||+||+|+...+ |....++.....-..+..+.+.|.||+|+..| +
T Consensus 163 iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a 242 (388)
T COG1168 163 ILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCA 242 (388)
T ss_pred EEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhhe
Confidence 99999999999999 89999999999999999999995443 43333332222222467788889999999877 5
Q ss_pred EEE-ecHHHHHHHH-hhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--CCccccCCCc
Q psy16848 337 YIV-GTKNFIDTIR-SYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI--GFPVEHTPSH 412 (514)
Q Consensus 337 ~l~-~~~~~~~~l~-~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~ 412 (514)
+++ .++++..+.. +..... ....|.+.+.|..++.+.- +++++++.+.++.+++++.+.|.+. ++.+..++|.
T Consensus 243 ~~Ii~n~~lr~~~~~~l~~~~--~~~~n~lg~~A~~aAY~~G-~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gT 319 (388)
T COG1168 243 YIIISNRELRAKFLKRLKRNG--LHGPSALGIIATEAAYNQG-EPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGT 319 (388)
T ss_pred eEEecCHHHHHHHHHHHHHhc--CCCCchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCc
Confidence 554 4455433332 222222 3367888888888888865 6889999999999999999999997 8888888876
Q ss_pred -EEEEEeCC-CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 413 -IIPIKIGN-PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 413 -~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
..++.+.. +.+..++.+.++++.+|.+.+|..++ ..+.+++|+++. ++++-+++++++|+..+++.
T Consensus 320 YL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG-~~g~gf~RlN~a--cpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 320 YLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFG-EEGSGFVRLNFA--CPRAILEEALERLKRALKKR 387 (388)
T ss_pred eeeeeeccccCCChHHHHHHHHHhhcEeccCCCccC-cCCCceEEEecC--CCHHHHHHHHHHHHHHHhcc
Confidence 45566653 23456888999889999999999844 667899999998 78999999999999887754
No 90
>KOG0257|consensus
Probab=99.96 E-value=1.3e-27 Score=230.58 Aligned_cols=333 Identities=21% Similarity=0.236 Sum_probs=239.2
Q ss_pred ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----CcEEEEecc-ccccccchhhccccCCCceEE
Q psy16848 31 PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EAGLVFTSC-YVANDSTLFTLGKMIPGLHYI 105 (514)
Q Consensus 31 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~i~~~sG-t~a~~~~l~~l~~~~~gd~v~ 105 (514)
++-+.+++.+.+..... ..+...+|.+++.+.|++++++++|. +.-+++|+| .+++..++.+++. +||+|+
T Consensus 46 P~fv~ea~~~~~~~~~~--~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~--~GDeVi 121 (420)
T KOG0257|consen 46 PKFVTEAAKNAAKEPST--NQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN--PGDEVI 121 (420)
T ss_pred cHHHHHHHHHHhccchh--ccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC--CCCEEE
Confidence 45678888887776422 22334567889999999999998763 333555555 5677778888877 999999
Q ss_pred ecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecc
Q psy16848 106 SDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEV 185 (514)
Q Consensus 106 ~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (514)
+-++.+.+....++.+|..++.++.. ++-
T Consensus 122 i~eP~fd~Y~~~~~maG~tpv~v~~~----------------~~~----------------------------------- 150 (420)
T KOG0257|consen 122 VFEPFFDCYIPQVVMAGGTPVFVPLK----------------PKE----------------------------------- 150 (420)
T ss_pred EecCcchhhhhHHhhcCCcceeeccc----------------ccc-----------------------------------
Confidence 99999999988888888877765441 000
Q ss_pred ccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEE
Q psy16848 186 HAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAF 265 (514)
Q Consensus 186 ~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~ 265 (514)
|. +..+++..+...++...+++||+|++
T Consensus 151 ------------------------------------------------g~----~~s~~~~~D~~~le~~~t~kTk~Ii~ 178 (420)
T KOG0257|consen 151 ------------------------------------------------GN----VSSSDWTLDPEELESKITEKTKAIIL 178 (420)
T ss_pred ------------------------------------------------cc----ccCccccCChHHHHhhccCCccEEEE
Confidence 00 01224444455566666788999999
Q ss_pred ecCCCCCccccC---HHHHHHHHHHcCCEEEEecccccc-ccCCCCCCccccCCCccCceEEEcCCcccccCCC---eEE
Q psy16848 266 ETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVG-LYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYI 338 (514)
Q Consensus 266 ~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g-~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l 338 (514)
++||||||.+.+ |++|+++|++||+++|.||+|... +.+.....+....+ ..+..+-++|++|++|..| ||+
T Consensus 179 ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPg-m~ertitvgS~gKtf~~TGWrlGW~ 257 (420)
T KOG0257|consen 179 NTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPG-MYERTITVGSFGKTFGVTGWRLGWA 257 (420)
T ss_pred eCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCc-hhheEEEeccccceeeeeeeeeeee
Confidence 999999999999 899999999999999999999943 33432323332333 3568899999999999999 999
Q ss_pred EecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhh-------hchHHHHHHHHHHHHHHHHHHHHhCCCccccCCC
Q psy16848 339 VGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILS-------SQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPS 411 (514)
Q Consensus 339 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 411 (514)
++++++...+........+ ..+.+.+.|..+++..-. ...+.++.+.++++++.+.+.|.++|+++..+.+
T Consensus 258 igp~~L~~~~~~vh~~~~~--~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p~g 335 (420)
T KOG0257|consen 258 IGPKHLYSALFPVHQNFVF--TCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGPEG 335 (420)
T ss_pred echHHhhhhHHHHhhcccc--ccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCC
Confidence 9999999999888877755 444455544444444322 1334568899999999999999999999988876
Q ss_pred c-EEEEEeCC------------CccHHHHHHHHHHhCCeEEecccCCCCCC----CCcEEEEEeCCCCCHHHHHHHHHHH
Q psy16848 412 H-IIPIKIGN------------PALNTKICDMLLKEKGHYVQPINYPTVPV----GEEKIRLAPTPFHTREMIDKFVTDL 474 (514)
Q Consensus 412 ~-~~~i~l~~------------~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~----~~~~iRl~~~~~~t~e~id~~~~~l 474 (514)
. +++..++. ..+...++.++.++.|+.+-|.+.+.... ..+.+|+++. -+++-++..++.+
T Consensus 336 ayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~--k~~~~L~~a~e~l 413 (420)
T KOG0257|consen 336 AYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFC--KADETLRKAIERL 413 (420)
T ss_pred ceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHH--hhHHHHHHHHHHH
Confidence 6 55566651 11344677888888899988887644332 2456777766 3566677777776
Q ss_pred H
Q psy16848 475 L 475 (514)
Q Consensus 475 ~ 475 (514)
+
T Consensus 414 ~ 414 (420)
T KOG0257|consen 414 K 414 (420)
T ss_pred h
Confidence 6
No 91
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2e-26 Score=235.53 Aligned_cols=338 Identities=14% Similarity=0.118 Sum_probs=236.9
Q ss_pred CceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC--cEEEEeccccccccch
Q psy16848 17 NRVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE--AGLVFTSCYVANDSTL 92 (514)
Q Consensus 17 g~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~~i~~~sGt~a~~~~l 92 (514)
+..+|+++.+. +..+|.+.+++.+++...... .++......++++.+++++|.+ ..++++++++++..++
T Consensus 27 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~------~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~ 100 (380)
T PRK06225 27 DKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYC------KYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVM 100 (380)
T ss_pred cCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCC------CCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHH
Confidence 45678886433 335789999999888742111 1223334678999999998754 4666777788888888
Q ss_pred hhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhh
Q psy16848 93 FTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEV 172 (514)
Q Consensus 93 ~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (514)
.+++. +||.|+++++.|......++..|++++.++..+
T Consensus 101 ~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---------------------------------------- 138 (380)
T PRK06225 101 RAFLS--PGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYS---------------------------------------- 138 (380)
T ss_pred HHhcC--CCCEEEEcCCCCcchHHHHHHhCceEEeecccc----------------------------------------
Confidence 88865 999999999988766655555666555433100
Q ss_pred hhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHH
Q psy16848 173 SHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVL 252 (514)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l 252 (514)
+.+++..+.+.+
T Consensus 139 --------------------------------------------------------------------~~~~~~~d~~~l 150 (380)
T PRK06225 139 --------------------------------------------------------------------EECNYKLTPELV 150 (380)
T ss_pred --------------------------------------------------------------------ccCCccCCHHHH
Confidence 000122222334
Q ss_pred hhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcc
Q psy16848 253 ENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGK 329 (514)
Q Consensus 253 ~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK 329 (514)
++..+++++++++++|+||||.+++ +++|.++|+++|+++|+||+|.....+.. .. .....+.++++.||||
T Consensus 151 ~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~---~~~~~~~~i~~~s~SK 225 (380)
T PRK06225 151 KENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHT--LA---AEYAPEHTVTSYSFSK 225 (380)
T ss_pred HhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCC--ch---hhcCCCCEEEEeechh
Confidence 4444456889998899999999998 89999999999999999999973222111 11 1112356788899999
Q ss_pred cccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCc
Q psy16848 330 AFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFP 405 (514)
Q Consensus 330 ~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 405 (514)
++|.+| ||+++++++++.+...... +.+.+.+.+.++.+.++.. ....+++++.++++.+.+.+.|+++ ++.
T Consensus 226 ~~g~~G~RiG~i~~~~~l~~~~~~~~~~---~~~~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 301 (380)
T PRK06225 226 IFGMAGLRIGAVVATPDLIEVVKSIVIN---DLGTNVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVF 301 (380)
T ss_pred hcCCccceeEEEecCHHHHHHHHHHHhc---ccCCCHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCc
Confidence 998767 9999999999888765421 2355677777777777643 3445566677777788888888875 532
Q ss_pred --cccCCCcEEEEEeCC-CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 406 --VEHTPSHIIPIKIGN-PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 406 --~~~~~~~~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
..++.+.++++.++. ..+..++++.|. ++||.+.++.++....+.+++|++++ .+++++++++++|++++++++
T Consensus 302 ~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~--~~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 302 LPVYPSHGNMMVIDISEAGIDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFS--IPREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred cccCCCCCeEEEEEcccccCCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 334556688887754 346788999996 89999999876443345679999998 478999999999999998765
No 92
>PRK08175 aminotransferase; Validated
Probab=99.96 E-value=4.5e-26 Score=234.02 Aligned_cols=348 Identities=15% Similarity=0.108 Sum_probs=237.8
Q ss_pred cCCceeeecccCCCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC---Cc-EEEEecccc-c
Q psy16848 15 KSNRVTCRLSSVQYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK---EA-GLVFTSCYV-A 87 (514)
Q Consensus 15 ~~g~~~~d~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~---~~-~i~~~sGt~-a 87 (514)
..|..++|+..+... ..+.+.+++.+.+... ....+....|..++.+.+.+.+.+.+|. +. .+++++|++ +
T Consensus 26 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~ 103 (395)
T PRK08175 26 RRGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRP--DTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEG 103 (395)
T ss_pred hcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCC--CcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence 356778998654433 2455777776665431 1122223345556666666666655442 23 466667664 5
Q ss_pred cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchh
Q psy16848 88 NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK 167 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (514)
+..++..+.. |||.|+++.+.|......++..|.+++.++....
T Consensus 104 l~~~~~~~~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---------------------------------- 147 (395)
T PRK08175 104 LAHLMLATLD--HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG---------------------------------- 147 (395)
T ss_pred HHHHHHHhCC--CCCEEEEcCCCCcchHHHHHHcCCeEEEEecccC----------------------------------
Confidence 5556666655 9999999999998877666666666554432100
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH 247 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~ 247 (514)
..+.+.
T Consensus 148 --------------------------------------------------------------------------~~~~~~ 153 (395)
T PRK08175 148 --------------------------------------------------------------------------VDFFNE 153 (395)
T ss_pred --------------------------------------------------------------------------CCcHHH
Confidence 002344
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccC-CCCCCccccCCCccCceEE
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYG-EHGAGIGERDGQLHNMDII 323 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g-~~~~~~~~~~~~~~~~di~ 323 (514)
+++.+++. .++++++++++|+||||.+++ +++|.++|++||+++|+||+|.....+ ....++..... ..+..++
T Consensus 154 l~~~l~~~-~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~-~~~~~i~ 231 (395)
T PRK08175 154 LERAIRES-YPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPG-AKDVAVE 231 (395)
T ss_pred HHHHHhhc-cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCC-cccCEEE
Confidence 44444432 235789999999999999999 489999999999999999999844332 11112221111 1245688
Q ss_pred EcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy16848 324 SGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELI 400 (514)
Q Consensus 324 ~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 400 (514)
++||||.+|.+| ||+++++++++.+....... ..+.+.+.+.++..+++.. ..+++++++.++++++++.+.|+
T Consensus 232 ~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~ 308 (395)
T PRK08175 232 FFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYH--DYGTFTPLQVAAIAALEGD-QQCVRDIAEQYKRRRDVLVKGLH 308 (395)
T ss_pred EeeccccccCcchhheeeeCCHHHHHHHHHHHhhc--ccCCCcHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999998768 99999999999887665443 2244555666666767532 34577788999999999999999
Q ss_pred hCCCccccC-CCcEEEEEeCCCc---cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 401 QIGFPVEHT-PSHIIPIKIGNPA---LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 401 ~~g~~~~~~-~~~~~~i~l~~~~---~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
+.++.+..+ .+.++++++++.. +..++++.+++++||.+.++..+. ..+++++|+++. .+++.+.+++++|.+
T Consensus 309 ~~~~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~-~~~~~~lRis~~--~~~~~~~~al~~l~~ 385 (395)
T PRK08175 309 EAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFG-DYGDTHVRFALI--ENRDRIRQAIRGIKA 385 (395)
T ss_pred HcCCcccCCCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhC-cCCCCeEEEEeC--CCHHHHHHHHHHHHH
Confidence 988776655 4557888887642 367888887667899999988643 334679999997 578999999999999
Q ss_pred HHHHcC
Q psy16848 477 VWKSLD 482 (514)
Q Consensus 477 ~l~~~~ 482 (514)
++++..
T Consensus 386 ~l~~~~ 391 (395)
T PRK08175 386 MFRADG 391 (395)
T ss_pred HHHhcC
Confidence 988654
No 93
>PRK05965 hypothetical protein; Provisional
Probab=99.96 E-value=1.3e-26 Score=240.51 Aligned_cols=218 Identities=20% Similarity=0.243 Sum_probs=168.0
Q ss_pred hHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCc
Q psy16848 246 NHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNM 320 (514)
Q Consensus 246 ~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~ 320 (514)
+.+++.+++...+++++|++++++...|.+.+ +++|+++|++||+++|.||+++ +|+.|..+ ..+.+++ .|
T Consensus 202 ~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~--a~~~~gv--~P 277 (459)
T PRK05965 202 AALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLF--ACEAEGV--VP 277 (459)
T ss_pred HHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhh--hHhhcCC--CC
Confidence 45666676544467999999999999998876 8999999999999999999999 77776532 2334554 89
Q ss_pred eEEEcCCcccccCCC----eEEEecHHHHHHHHhhc-----CceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHH
Q psy16848 321 DIISGTLGKAFGNIG----GYIVGTKNFIDTIRSYA-----AGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDI 391 (514)
Q Consensus 321 di~~~S~sK~lg~~G----G~l~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 391 (514)
|++ +++|.+++ | |.+++++++.+.+.... ...+.+++.+++.++++.++|+.+.++. +.++.+++
T Consensus 278 Div--~~gKgl~g-G~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~ 351 (459)
T PRK05965 278 DLM--TVAKGLTS-GYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGG---LLANGQKA 351 (459)
T ss_pred CeE--Eechhhcc-CCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHH
Confidence 999 99999976 4 78889999888775321 1123356889999999999999997666 77788899
Q ss_pred HHHHHHHHHhC-CCcc---ccCCCcEEEEEeCCCc-----------cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEE
Q psy16848 392 VAYLRNELIQI-GFPV---EHTPSHIIPIKIGNPA-----------LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRL 456 (514)
Q Consensus 392 ~~~l~~~L~~~-g~~~---~~~~~~~~~i~l~~~~-----------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl 456 (514)
.+++.+.|+++ ..+. +...|.++.+++.... ....+.+.++ ++|+.+.+ .+.+.+|+
T Consensus 352 g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gll~~~-------~g~~~i~~ 423 (459)
T PRK05965 352 GPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAY-ANGLVFRA-------FGDGVLGF 423 (459)
T ss_pred HHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHH-hCCeEEEe-------cCCcEEEE
Confidence 99999888876 2222 2345667777763210 1346777786 89999863 13468999
Q ss_pred EeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 457 APTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 457 ~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
.+++.+|++|++++++++.++++++
T Consensus 424 ~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 424 APALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred ECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999876
No 94
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.96 E-value=1.6e-26 Score=237.68 Aligned_cols=220 Identities=20% Similarity=0.261 Sum_probs=161.7
Q ss_pred hhHHHHHHhhc-cCCCceEEEEecCCCCCcccc-C---HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCcc
Q psy16848 245 VNHLTQVLENM-DVKIPKLVAFETVHSMTGAIC-P---LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLH 318 (514)
Q Consensus 245 ~~~l~~~l~~~-~~~~~~~vv~~~~~nptG~~~-~---l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~ 318 (514)
++.+++.+.+. ..+++++|++++++..+|... | +++|+++|++||+++|+||+++ +|..|... ..+..+.
T Consensus 183 ~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~--a~~~~gv-- 258 (425)
T PRK07495 183 LAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLF--AMEHHEV-- 258 (425)
T ss_pred HHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCce--eecccCC--
Confidence 34456666532 235689999999998888554 4 8999999999999999999998 44443211 1223333
Q ss_pred CceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy16848 319 NMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYL 395 (514)
Q Consensus 319 ~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 395 (514)
.+|++ +++|.+++ | |++++++++.+.+....... +++.+++.++++.++++.+.++. +.++.+++.+++
T Consensus 259 ~pDi~--tlsK~l~~-G~pigav~~~~~i~~~~~~~~~~~--T~~~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l 330 (425)
T PRK07495 259 AADLT--TMAKGLAG-GFPLAAVTGRAEIMDAPGPGGLGG--TYGGNPLGIAAAHAVLDVIEEED---LCERANQLGNRL 330 (425)
T ss_pred CCCEE--eehhhhcC-CccceEEEEcHHHHhccCCCCcCC--CCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHH
Confidence 78988 99999986 5 88999999988776543333 55789999999999999886554 677788888888
Q ss_pred HHHHHhC--CCcc---ccCCCcEEEEEeCCCc-------cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCC
Q psy16848 396 RNELIQI--GFPV---EHTPSHIIPIKIGNPA-------LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHT 463 (514)
Q Consensus 396 ~~~L~~~--g~~~---~~~~~~~~~i~l~~~~-------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t 463 (514)
++.|+++ .++. +...|.++++++.+.. ....+.+.++ ++|+.+.+.. ...+.+|+.++..+|
T Consensus 331 ~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~g-----~~~~~~r~~Ppl~it 404 (425)
T PRK07495 331 KQRLASLRETVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKAL-EKGLILLTCG-----VHGNVIRFLAPITIQ 404 (425)
T ss_pred HHHHHHHHhhCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHH-HCCeEEeecC-----CCCCEEEEeCCCccC
Confidence 8887765 2332 2345678888874321 1346777775 8999986321 124689999999999
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q psy16848 464 REMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 464 ~e~id~~~~~l~~~l~~~~ 482 (514)
++++++++++|+++++++.
T Consensus 405 ~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 405 DDVFAEALDILEASILEAS 423 (425)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998754
No 95
>PRK07678 aminotransferase; Validated
Probab=99.96 E-value=1.3e-26 Score=240.05 Aligned_cols=223 Identities=21% Similarity=0.233 Sum_probs=166.6
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCceE
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMDI 322 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~di 322 (514)
+++.++....+++++|++++++...|.+.+ +++|+++|++||+++|.||+++ +|+.|+.+ ++ +.+++ .||+
T Consensus 202 l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~-~~~gv--~PDi 277 (451)
T PRK07678 202 IDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAF-GF-MNYGV--KPDI 277 (451)
T ss_pred HHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhH-HH-HhcCC--CCCE
Confidence 455565333467999999999999898877 8999999999999999999997 77766432 12 34554 7999
Q ss_pred EEcCCcccccCCC---eEEEecHHHHHHHHhhcC----ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy16848 323 ISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAA----GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYL 395 (514)
Q Consensus 323 ~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 395 (514)
+ +++|++|+.. |.+++++++.+.+..... ....+++.+++.++++.++|+.+.++. +.++.+++.+++
T Consensus 278 v--t~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~---~~~~~~~~g~~l 352 (451)
T PRK07678 278 I--TMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENEN---LIERSAQLGELL 352 (451)
T ss_pred E--EeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHH
Confidence 9 8999998722 778889999887764211 123366889999999999999886655 677788888888
Q ss_pred HHHHHhC--CCcc---ccCCCcEEEEEeCCC---------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCC
Q psy16848 396 RNELIQI--GFPV---EHTPSHIIPIKIGNP---------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPF 461 (514)
Q Consensus 396 ~~~L~~~--g~~~---~~~~~~~~~i~l~~~---------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~ 461 (514)
.+.|++. ..++ +...|.++.+++... .....+...++ ++||++.+. .+..+...+.+|++++..
T Consensus 353 ~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~-~~Gv~~~~~-g~~v~~~~~~lrl~Ppl~ 430 (451)
T PRK07678 353 LEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACK-EKGLIIGKN-GDTVAGYNNVLTLSPPLV 430 (451)
T ss_pred HHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHH-HCCcEEeec-CccccCCCCEEEEECCCc
Confidence 8877653 2222 344677888777321 12456778886 899999642 222233357899999999
Q ss_pred CCHHHHHHHHHHHHHHHHHc
Q psy16848 462 HTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 462 ~t~e~id~~~~~l~~~l~~~ 481 (514)
+|++|+++++++++++++++
T Consensus 431 it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 431 ISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999998765
No 96
>PRK07777 aminotransferase; Validated
Probab=99.96 E-value=2.6e-26 Score=235.36 Aligned_cols=342 Identities=17% Similarity=0.161 Sum_probs=233.2
Q ss_pred ceeeecccCCC--CCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-----cEEEEecccccccc
Q psy16848 18 RVTCRLSSVQY--KVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-----AGLVFTSCYVANDS 90 (514)
Q Consensus 18 ~~~~d~~~~~~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~i~~~sGt~a~~~ 90 (514)
...+|+..+.. -.++.+.+++.+.+.. ....+....|..++.+.+.+.+.+.+|.+ +.+++++|++|+..
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 100 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAIAG---GVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAA 100 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhc---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHH
Confidence 35688854332 2345677777666653 11222223345566666666666666642 35555666778887
Q ss_pred chhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHh
Q psy16848 91 TLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 91 ~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
++.++.. +||.|+++.+.|......++..|.+++.++..+.+
T Consensus 101 ~~~~~~~--~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~------------------------------------ 142 (387)
T PRK07777 101 AVLGLVE--PGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDG------------------------------------ 142 (387)
T ss_pred HHHHhcC--CCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCcc------------------------------------
Confidence 7877765 99999999999988887777777766544321000
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQ 250 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 250 (514)
.+. ..|.+.+++
T Consensus 143 -----------------------~~~---------------------------------------------~~d~~~l~~ 154 (387)
T PRK07777 143 -----------------------RGF---------------------------------------------ALDLDALRA 154 (387)
T ss_pred -----------------------CCC---------------------------------------------cCCHHHHHH
Confidence 000 013344444
Q ss_pred HHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCccCceEEEcC
Q psy16848 251 VLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLHNMDIISGT 326 (514)
Q Consensus 251 ~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~~di~~~S 326 (514)
.+ .++++++++++|+||||.+++ +++|.++|+++++++|+||+|....+ +....++....+ ..+.++++.|
T Consensus 155 ~~----~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~-~~~~~i~~~S 229 (387)
T PRK07777 155 AV----TPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPG-MRERTVTISS 229 (387)
T ss_pred hc----CcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCC-CcCcEEEEee
Confidence 33 346889999999999999998 78999999999999999999984433 222222222222 1357899999
Q ss_pred CcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCC
Q psy16848 327 LGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIG 403 (514)
Q Consensus 327 ~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 403 (514)
|||.+|.+| ||+++++++++.+........+ ..+.+.+.++...+... +.+++++++.++++++.+.+.|++.+
T Consensus 230 ~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~ 306 (387)
T PRK07777 230 AAKTFNVTGWKIGWACGPAPLIAAVRAAKQYLTY--VGGAPFQPAVAHALDHE-DAWVAALRDSLQAKRDRLAAGLAEAG 306 (387)
T ss_pred chhhccCcCceeEEEecCHHHHHHHHHHHhhccc--CCCCHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999668 9999999999888765543322 34445555555556432 35667788999999999999999988
Q ss_pred CccccCCCc-EEEEEeCC--CccHHHHHHHHHHhCCeEEecccCCCC--CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 404 FPVEHTPSH-IIPIKIGN--PALNTKICDMLLKEKGHYVQPINYPTV--PVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 404 ~~~~~~~~~-~~~i~l~~--~~~~~~~~~~Ll~~~GI~v~~~~~~~~--~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
+.+..+.++ +++++++. ..+..++++.|++++||.+.|+..+.. +.+.+++|++++ .+++++++++++|+++.
T Consensus 307 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~--~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 307 FEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC--KRDDTLDEAIRRLRALR 384 (387)
T ss_pred CCccCCCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec--CCHHHHHHHHHHHHHHh
Confidence 877766655 45556542 235789999997578999999985432 234679999998 36899999999998754
No 97
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.96 E-value=1.8e-26 Score=239.23 Aligned_cols=361 Identities=20% Similarity=0.188 Sum_probs=238.5
Q ss_pred cCCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHc-C-CCcEEEEeccccc
Q psy16848 15 KSNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLH-Q-KEAGLVFTSCYVA 87 (514)
Q Consensus 15 ~~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-~-~~~~i~~~sGt~a 87 (514)
.+|+.|+|+.++ ..+| ||+|.+++.++++++....++.. ..+...++++++++++ + .++++|++||++|
T Consensus 40 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~----~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA 115 (433)
T PRK08117 40 VDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVI----YYESILKLAEELAEITPGGLDCFFFSNSGAEA 115 (433)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccccc----CCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHH
Confidence 367777777543 2344 79999999999998654332211 3477889999999998 3 4566777999999
Q ss_pred cccchhhccc-cCCCceEEecCccchhhhhhhhcCCCCee--eccCCChHHHHHHHHhcccCCCcEEEeeccccccCCcc
Q psy16848 88 NDSTLFTLGK-MIPGLHYISDAGNHASMIQGIRNSSAPKI--IYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAIC 164 (514)
Q Consensus 88 ~~~~l~~l~~-~~~gd~v~~~~~~h~~~~~~~~~~~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (514)
++.+++.... .++...|.++..+|..+..++...+.... ...+.. .+ ++.
T Consensus 116 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~--------------~~------~~~------- 168 (433)
T PRK08117 116 IEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPL--------------LG------SVY------- 168 (433)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCC--------------CC------CcE-------
Confidence 9999975332 23445556666666666655443321110 000000 00 000
Q ss_pred chhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCC
Q psy16848 165 PLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHND 244 (514)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d 244 (514)
.++.|..+. . ..+........++
T Consensus 169 ------------------------------------------------------~~~~~~~~~--~-~~~~~~~~~~~~~ 191 (433)
T PRK08117 169 ------------------------------------------------------QAPYPYCDR--C-PKGEDPEVCFLEC 191 (433)
T ss_pred ------------------------------------------------------EeCCCcccc--c-cccCchhHHHHHH
Confidence 000000000 0 0000000111235
Q ss_pred hhHHHHHHhhc-cCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCcc-ccCCCcc
Q psy16848 245 VNHLTQVLENM-DVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIG-ERDGQLH 318 (514)
Q Consensus 245 ~~~l~~~l~~~-~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~-~~~~~~~ 318 (514)
++.+++.+++. ..+++++|+++++++..|.+.+ +++|+++|++||+++|+||+|+ | +|+.|.++. +..+.
T Consensus 192 ~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G-~gr~G~~~~~~~~gv-- 267 (433)
T PRK08117 192 LRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-G-FGRTGEWFAAQTFGV-- 267 (433)
T ss_pred HHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-c-cCccccchhHhhcCC--
Confidence 66677777652 2356899999999999999988 9999999999999999999999 3 344443332 33443
Q ss_pred CceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy16848 319 NMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYL 395 (514)
Q Consensus 319 ~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 395 (514)
.+|++ |++|++++ | |++++++++.+.+....... +.+.+++.++++.++|+.+.++. +.++++++.+++
T Consensus 268 ~pDi~--t~sK~lg~-G~pigav~~~~~i~~~~~~~~~~~--T~~~np~~~aaa~a~L~~l~~~~---l~~~~~~~g~~l 339 (433)
T PRK08117 268 VPDIM--TIAKGIAS-GLPLSAVVASKELMEQWPLGSHGT--TFGGNPVACAAALATLEVIKEEK---LLDNANEMGAYA 339 (433)
T ss_pred CCCEe--ehhhhccC-CCcceeEEEcHHHHhhccCCCCCC--CCCcCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHH
Confidence 68887 99999986 5 88899999888775433333 45789999999999999885444 677788888888
Q ss_pred HHHHHhC--CCcc---ccCCCcEEEEEeCC------CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCH
Q psy16848 396 RNELIQI--GFPV---EHTPSHIIPIKIGN------PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTR 464 (514)
Q Consensus 396 ~~~L~~~--g~~~---~~~~~~~~~i~l~~------~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~ 464 (514)
++.|+++ .++. +...+.++.+++.+ ......+.+.++ ++||.+.+.. ...+.+|++++..+|+
T Consensus 340 ~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g-----~~~~~lRl~p~~~~t~ 413 (433)
T PRK08117 340 LERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCL-EKGLLFYLCG-----NAGNVLRMIPPLTVTK 413 (433)
T ss_pred HHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHH-HCCCEEeecC-----CCCCEEEEeCCccCCH
Confidence 8888775 2332 23345577777632 123456778885 8999886421 1246899999999999
Q ss_pred HHHHHHHHHHHHHHHHc
Q psy16848 465 EMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 465 e~id~~~~~l~~~l~~~ 481 (514)
+++++++++|.++++++
T Consensus 414 ~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 414 EEIDEGLDILDEALTEY 430 (433)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998765
No 98
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.96 E-value=1.2e-26 Score=238.99 Aligned_cols=344 Identities=17% Similarity=0.206 Sum_probs=227.9
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC---CCcEEEEeccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ---KEAGLVFTSCYVA 87 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~i~~~sGt~a 87 (514)
+|++|+|+.+. ..++ ||++.+++.+++++....... ....+...++.+++++++. .++++|++||++|
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~----~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA 113 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQ----IVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEA 113 (421)
T ss_pred CCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccC----ccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHH
Confidence 66677777432 2223 899999999999985322111 1124666788888988864 2578899999999
Q ss_pred cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccc
Q psy16848 88 NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICP 165 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~ 165 (514)
++.|++... ..+++++++.++|.||.. +.+.
T Consensus 114 ~e~AlklAr----------------------------------------------~~tgr~~ii~~~~~yHG~t~~~~s- 146 (421)
T PRK09792 114 VENAVKIAR----------------------------------------------AHTGRPGVIAFSGGFHGRTYMTMA- 146 (421)
T ss_pred HHHHHHHHH----------------------------------------------HhcCCCeEEEECCCcCCccHHHHh-
Confidence 999995432 234556677777777521 1100
Q ss_pred hhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec----
Q psy16848 166 LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR---- 241 (514)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~---- 241 (514)
.++. ..+ ....+.. + ..+...+++|
T Consensus 147 ---------------------------~~~~-------------------~~~---~~~~~~~-~-~~~~~~v~~p~~~~ 175 (421)
T PRK09792 147 ---------------------------LTGK-------------------VAP---YKIGFGP-F-PGSVYHVPYPSDLH 175 (421)
T ss_pred ---------------------------hcCC-------------------Ccc---cccCCCC-C-CCCcEEcCCCcccc
Confidence 0000 000 0000000 0 0011111111
Q ss_pred ----CCChhHHHHHHhhc-cCCCceEEEEecCCCCCcccc-C---HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCcc
Q psy16848 242 ----HNDVNHLTQVLENM-DVKIPKLVAFETVHSMTGAIC-P---LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIG 311 (514)
Q Consensus 242 ----~~d~~~l~~~l~~~-~~~~~~~vv~~~~~nptG~~~-~---l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~ 311 (514)
.++++.+++.+++. ..+++++|+++++++++|... | +++|+++|++||+++|+||+++ +|+.|..+ ..
T Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~--a~ 253 (421)
T PRK09792 176 GISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLF--AM 253 (421)
T ss_pred cccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchh--HH
Confidence 13456677777642 235689999999999999876 5 8999999999999999999999 55554321 11
Q ss_pred ccCCCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHH
Q psy16848 312 ERDGQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKH 388 (514)
Q Consensus 312 ~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 388 (514)
...+. .+|++ |++|++++ | |++++++++.+.+....... +.+.+++.++++.++++.+.++. ..+++
T Consensus 254 ~~~~~--~pDi~--t~gK~l~~-G~pigav~~~~~i~~~~~~~~~~~--T~~gnpl~~aaa~a~l~~l~~~~---~~~~~ 323 (421)
T PRK09792 254 DHYAD--KPDLM--TMAKSLAG-GMPLSGVVGNANIMDAPAPGGLGG--TYAGNPLAVAAAHAVLNIIDKES---LCERA 323 (421)
T ss_pred HhcCC--CCcEE--EeehhhcC-CCceEEEEEcHHHHhccCCCCcCC--CCCCCHHHHHHHHHHHHHHHhhh---HHHHH
Confidence 23333 68887 99999986 5 88999999988776443333 55789999999999999886543 56666
Q ss_pred HHHHHHHHHHHHhC--CCcc---ccCCCcEEEEEeCCC-------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEE
Q psy16848 389 QDIVAYLRNELIQI--GFPV---EHTPSHIIPIKIGNP-------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRL 456 (514)
Q Consensus 389 ~~~~~~l~~~L~~~--g~~~---~~~~~~~~~i~l~~~-------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl 456 (514)
+++.+++.+.|+++ .++. +...|.++++++++. .....+...++ ++||.+.+. ....+.+|+
T Consensus 324 ~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~-~~Gv~i~~~-----g~~~~~irl 397 (421)
T PRK09792 324 NQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRAL-AQGLLLLTC-----GAYGNVIRF 397 (421)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCccCCcchHHHHHHHHHHH-HCCcEEeec-----CCCCCEEEE
Confidence 67777777766654 2322 233467888888643 23567888886 899998521 112578999
Q ss_pred EeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 457 APTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 457 ~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
.++..++++|++++++++.++++
T Consensus 398 ~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 398 LYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred eCCCcCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999998874
No 99
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.96 E-value=3.4e-26 Score=236.26 Aligned_cols=218 Identities=23% Similarity=0.314 Sum_probs=165.4
Q ss_pred hhHHHHHHhhcc-CCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCcc
Q psy16848 245 VNHLTQVLENMD-VKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLH 318 (514)
Q Consensus 245 ~~~l~~~l~~~~-~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~ 318 (514)
.+.+++.+++.. .+++++|++++.+|++|.+++ +++|.++|++||+++|+||+|+ +|+.|... .....+.
T Consensus 189 ~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~--a~~~~~~-- 264 (443)
T PRK08360 189 VEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF--AIEHFGV-- 264 (443)
T ss_pred HHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch--hhhhcCC--
Confidence 445666665432 367999999999999999887 8999999999999999999999 55544311 1123343
Q ss_pred CceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy16848 319 NMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYL 395 (514)
Q Consensus 319 ~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 395 (514)
.+|++ +++|++++ | |++++++++.+.+...... ++.+.++..++++.++++.+.++. +.++++++.+++
T Consensus 265 ~pDii--tlsK~l~~-G~pigav~~~~~i~~~~~~~~~~--~T~~~~p~~~aaa~a~l~~l~~~~---l~~~~~~~g~~l 336 (443)
T PRK08360 265 EPDII--TLGKPLGG-GLPISATIGRAEIMDSLPPLAHA--FTLSGNPVASAAALAVIEEIEEKN---LLKRAEKLGNYT 336 (443)
T ss_pred CCCEE--EecccccC-CceeEEEEEcHHHHhhhcCCCCC--CCCCcCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHH
Confidence 67888 88999986 5 9999999999888644333 355788999999999999886554 678888888888
Q ss_pred HHHHHhC--CCcc---ccCCCcEEEEEeCCC--------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCC
Q psy16848 396 RNELIQI--GFPV---EHTPSHIIPIKIGNP--------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFH 462 (514)
Q Consensus 396 ~~~L~~~--g~~~---~~~~~~~~~i~l~~~--------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~ 462 (514)
++.|+++ ..++ +...|.++.+++.+. .....+...++ ++||.+.+. ..+.+|++++..+
T Consensus 337 ~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~~lr~~P~l~~ 408 (443)
T PRK08360 337 KKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAW-ELGLIVTFF-------SGNVLRIQPPLTI 408 (443)
T ss_pred HHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHH-HCCeEEeec-------CCCEEEEeCCCCC
Confidence 8888765 3332 234566888777421 12456778886 899998632 2368999999999
Q ss_pred CHHHHHHHHHHHHHHHHHcC
Q psy16848 463 TREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 463 t~e~id~~~~~l~~~l~~~~ 482 (514)
|++|+++++++++++++.+.
T Consensus 409 t~~~id~~~~~l~~~l~~~~ 428 (443)
T PRK08360 409 EKEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998764
No 100
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.96 E-value=9.6e-27 Score=238.97 Aligned_cols=219 Identities=21% Similarity=0.246 Sum_probs=161.3
Q ss_pred ChhHHHHHHhhcc--CCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCC
Q psy16848 244 DVNHLTQVLENMD--VKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQ 316 (514)
Q Consensus 244 d~~~l~~~l~~~~--~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~ 316 (514)
+++.+++.+.+.. .+++++|++++++++.|...+ +++|+++|++||+++|+||+++ +|+.|+.+ ..+..++
T Consensus 177 ~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~--a~~~~~v 254 (412)
T TIGR02407 177 TIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFF--SFEPAGI 254 (412)
T ss_pred HHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhH--HhcccCC
Confidence 4666777776432 246799999999999998654 8999999999999999999998 65554321 1223444
Q ss_pred ccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHH-hhhchHHHHHHHHHHHH
Q psy16848 317 LHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRI-LSSQEGVELRAKHQDIV 392 (514)
Q Consensus 317 ~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~ 392 (514)
.+|++ +++|++++.| |++++++++ +.+....... +++.+++.++++.++++. +.+.. +.++.+++.
T Consensus 255 --~PDi~--~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~~--T~~gnpl~~aaa~a~l~~~i~~~~---l~~~~~~~g 324 (412)
T TIGR02407 255 --EPDIV--CLSKSISGYGLPLALTLIKPEL-DVWKPGEHNG--TFRGNNLAFVTATAALEYYWSDDA---FEKAVQRKS 324 (412)
T ss_pred --CCCEE--EechhccCCccceeEEEEchhh-hccCCCccCC--CCCccHHHHHHHHHHHHHHhcccH---HHHHHHHHH
Confidence 78988 7899998745 888888775 5443322222 457889999999999995 54433 667777777
Q ss_pred HHHHHHHHhC----C-Ccc-ccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHH
Q psy16848 393 AYLRNELIQI----G-FPV-EHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREM 466 (514)
Q Consensus 393 ~~l~~~L~~~----g-~~~-~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~ 466 (514)
+++.+.|+++ + +.. +...|.++++++++......+...++ ++||.+.+.. ...+.+|++++..+|++|
T Consensus 325 ~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~-~~Gv~v~~~~-----~~~~~lr~~p~l~~t~~~ 398 (412)
T TIGR02407 325 EIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGDLAGKIAKAAF-ENGLIIETSG-----PNDEVIKLLPPLTIDEET 398 (412)
T ss_pred HHHHHHHHHHHhhCCCceEeeecceeEEEEEecChHHHHHHHHHHH-HCCCEEeccC-----CCCCEEEEECCCCCCHHH
Confidence 7777777653 2 211 23456788899876555678888886 8999997532 124689999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy16848 467 IDKFVTDLLAVWKS 480 (514)
Q Consensus 467 id~~~~~l~~~l~~ 480 (514)
++++++++++++++
T Consensus 399 i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 399 LQQGLDILEQAVEE 412 (412)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998753
No 101
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.96 E-value=4.2e-26 Score=235.89 Aligned_cols=344 Identities=13% Similarity=0.102 Sum_probs=232.5
Q ss_pred CceeeecccCC------CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC----CCcEEEEecccc
Q psy16848 17 NRVTCRLSSVQ------YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ----KEAGLVFTSCYV 86 (514)
Q Consensus 17 g~~~~d~~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~~~i~~~sGt~ 86 (514)
|..+|+++..+ +...+++.+++.++++.... .++....|..++.+.+.+.+.+..+ .+++++++++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~ 128 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKY--NSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQ 128 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcC--CCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHH
Confidence 66889996543 22357899999988875211 1122223444444444444433322 234565666678
Q ss_pred ccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccch
Q psy16848 87 ANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPL 166 (514)
Q Consensus 87 a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (514)
|+..++.++.. |||.|+++.+.|..........|.+++.++..
T Consensus 129 al~l~~~~l~~--~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~----------------------------------- 171 (430)
T PLN00145 129 AIEIIMSVLAQ--PGANILLPRPGYPLYEARAVFSGLEVRHFDLL----------------------------------- 171 (430)
T ss_pred HHHHHHHHhcC--CCCEEEEcCCCCccHHHHHHHcCCEEEEeeCC-----------------------------------
Confidence 88888888876 99999999999987665555555555433210
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
+.+++.
T Consensus 172 --------------------------------------------------------------------------~~~~~~ 177 (430)
T PLN00145 172 --------------------------------------------------------------------------PERGWE 177 (430)
T ss_pred --------------------------------------------------------------------------cccCCc
Confidence 011222
Q ss_pred HHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC-CCCCccccCCCccCceE
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE-HGAGIGERDGQLHNMDI 322 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~-~~~~~~~~~~~~~~~di 322 (514)
.+.+.+++..+++++++++++|+||||.+++ +++|.++|+++|+++|+||+|....++. ...++.... .....+
T Consensus 178 ~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~--~~~~vi 255 (430)
T PLN00145 178 VDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFG--EVAPVL 255 (430)
T ss_pred CCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhc--ccCcEE
Confidence 2223333334456899999999999999999 7899999999999999999998543322 222222122 235789
Q ss_pred EEcCCcccccCCC---eEEEe--cHHHHH------HHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHH
Q psy16848 323 ISGTLGKAFGNIG---GYIVG--TKNFID------TIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDI 391 (514)
Q Consensus 323 ~~~S~sK~lg~~G---G~l~~--~~~~~~------~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 391 (514)
+++||||.++.+| ||+++ ++.+++ .+.... .. ....+.+.+.++..+|+...+.++++.++.++++
T Consensus 256 ~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~ 332 (430)
T PLN00145 256 TLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYL-NI--STDPATFVQGAIPQIIANTKEEFFTKTLGLLKET 332 (430)
T ss_pred EEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHh-cc--cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 9999999998889 99986 334433 233222 11 2345678888888888743345677889999999
Q ss_pred HHHHHHHHHhC-CCccc-cCCC-cEEEEEeCC-----CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCC
Q psy16848 392 VAYLRNELIQI-GFPVE-HTPS-HIIPIKIGN-----PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHT 463 (514)
Q Consensus 392 ~~~l~~~L~~~-g~~~~-~~~~-~~~~i~l~~-----~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t 463 (514)
++.+.+.|++. ++.+. .+.+ .+++++++. ..+..+++..|++++||.+.|+..+.. ++++|++++ .+
T Consensus 333 ~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~---~~~lRis~~--~~ 407 (430)
T PLN00145 333 ADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGM---KNWLRITFA--ID 407 (430)
T ss_pred HHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCC---CCeEEEEeC--CC
Confidence 99999999987 76643 3544 466676652 124567888887788999999987542 579999998 47
Q ss_pred HHHHHHHHHHHHHHHHHcCC
Q psy16848 464 REMIDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 464 ~e~id~~~~~l~~~l~~~~~ 483 (514)
.+++++++++|++++++..+
T Consensus 408 ~~~l~~al~rl~~~~~~~~~ 427 (430)
T PLN00145 408 PPSLEDGLERLKSFCLRHAK 427 (430)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 88999999999999987653
No 102
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.96 E-value=1.5e-26 Score=240.30 Aligned_cols=292 Identities=13% Similarity=0.060 Sum_probs=212.8
Q ss_pred HHHHHHHHhHcC----CCcEEEEeccc-cccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHH
Q psy16848 63 EKLEEDVAKLHQ----KEAGLVFTSCY-VANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLT 137 (514)
Q Consensus 63 ~~~~~~la~~~~----~~~~i~~~sGt-~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~ 137 (514)
.++++.++++++ .+..|++++|+ +++..++.+++. |||.|+++.++|......++..|++++.++.++ +
T Consensus 124 ~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~--pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~-~--- 197 (431)
T PRK15481 124 PELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLL--PGDSVAVEDPCFLSSINMLRYAGFSASPVSVDA-E--- 197 (431)
T ss_pred HHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCC--CCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCC-C---
Confidence 445555666543 34355566654 567777777766 999999999999999888888887776554310 0
Q ss_pred HHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccC
Q psy16848 138 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVN 217 (514)
Q Consensus 138 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~ 217 (514)
T Consensus 198 -------------------------------------------------------------------------------- 197 (431)
T PRK15481 198 -------------------------------------------------------------------------------- 197 (431)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEe-cCCCCCccccCH---HHHHHHHHHc-CCEE
Q psy16848 218 PEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFE-TVHSMTGAICPL---KELCEVSHQH-GALT 292 (514)
Q Consensus 218 ~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~-~~~nptG~~~~l---~~l~~l~~~~-gv~l 292 (514)
.-|.+.+++.++. ++++++++ +||||||.+++. ++|.++|+++ ++++
T Consensus 198 ------------------------g~~~~~l~~~~~~----~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~i 249 (431)
T PRK15481 198 ------------------------GMQPEKLERALAQ----GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLV 249 (431)
T ss_pred ------------------------CCCHHHHHHHHhc----CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceE
Confidence 0134455555432 46777665 999999999995 6999999999 9999
Q ss_pred EEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHH
Q psy16848 293 FVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGA 369 (514)
Q Consensus 293 i~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~ 369 (514)
|+||+|....... ..+..+. ..+..++++||||.++ +| ||+++++++++.+....... ..+.|.+.+.++
T Consensus 250 i~De~Y~~~~~~~-~~~~~~~---~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~--~~~~s~~~q~a~ 322 (431)
T PRK15481 250 IIDDHFALLSSSP-YHSVIPQ---TTQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSG--TQWVSHLLQDLV 322 (431)
T ss_pred EecCchhhhccCC-CCCCCcC---CCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhcc--ccCCCHHHHHHH
Confidence 9999999443211 1111111 2357899999999999 58 99999999998887554333 235788888888
Q ss_pred HHHHHHhh-hchHHHHHHHHHHHHHHHHHHHHhCCCccccC-CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCC
Q psy16848 370 REAIRILS-SQEGVELRAKHQDIVAYLRNELIQIGFPVEHT-PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTV 447 (514)
Q Consensus 370 ~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~ 447 (514)
..+|+... ..++.+.++.++++++.+.+.|++.++.+..+ .+.++++.++. +..++++.|. ++||.+.|+..+..
T Consensus 323 ~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~--~~~~~~~~l~-~~gV~v~pg~~f~~ 399 (431)
T PRK15481 323 YACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDT--DSQATALTLA-KSGWLVREGEAFGV 399 (431)
T ss_pred HHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCC--CHHHHHHHHH-HCCcEEecCCcccc
Confidence 88886421 23467789999999999999999988876444 45577788874 3678888885 89999999886543
Q ss_pred CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 448 PVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 448 ~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
....+++|++++. .+++++++++++|++++.
T Consensus 400 ~~~~~~iRis~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 400 SAPSHGLRITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred CCCCCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence 3335689999984 568999999999998764
No 103
>PRK08363 alanine aminotransferase; Validated
Probab=99.96 E-value=2.8e-26 Score=235.91 Aligned_cols=346 Identities=14% Similarity=0.097 Sum_probs=230.9
Q ss_pred cCCceeeecccCC-----CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC----CCcEEEEeccc
Q psy16848 15 KSNRVTCRLSSVQ-----YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ----KEAGLVFTSCY 85 (514)
Q Consensus 15 ~~g~~~~d~~~~~-----~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~~~i~~~sGt 85 (514)
.+|..++|+..+. +..++.+.+++.+.+..... .+....|..++.+.+.+.+.+..| .+..+++++++
T Consensus 27 ~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 103 (398)
T PRK08363 27 KKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHN---YYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVT 103 (398)
T ss_pred hcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCC---CCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHH
Confidence 3567889996433 34577899988887764211 111122334444444444433333 12345455557
Q ss_pred cccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccc
Q psy16848 86 VANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP 165 (514)
Q Consensus 86 ~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (514)
+|+..++.+++. +||.|+++.++|......++..|..++.+...+
T Consensus 104 ~al~~~~~~~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~--------------------------------- 148 (398)
T PRK08363 104 EALQLIFGALLD--PGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIE--------------------------------- 148 (398)
T ss_pred HHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHHcCCEEEEecccc---------------------------------
Confidence 788888888865 999999999999988877777666655442110
Q ss_pred hhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCCh
Q psy16848 166 LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDV 245 (514)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~ 245 (514)
.+++
T Consensus 149 ----------------------------------------------------------------------------~~~~ 152 (398)
T PRK08363 149 ----------------------------------------------------------------------------EEGW 152 (398)
T ss_pred ----------------------------------------------------------------------------ccCC
Confidence 0011
Q ss_pred hHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceE
Q psy16848 246 NHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDI 322 (514)
Q Consensus 246 ~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di 322 (514)
....+.+++...++++++++++|+||||.+++ +++|.++|+++|+++|+||+|....+.....++.... .....+
T Consensus 153 ~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~--~~~~vi 230 (398)
T PRK08363 153 QPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLT--KDVPVI 230 (398)
T ss_pred cCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcC--cCCcEE
Confidence 11112233333446889999999999999999 8999999999999999999998443322111222111 124578
Q ss_pred EEcCCcccccCCC---eEEEe--cHHHHHHHHhhcCce-EeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q psy16848 323 ISGTLGKAFGNIG---GYIVG--TKNFIDTIRSYAAGF-IFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLR 396 (514)
Q Consensus 323 ~~~S~sK~lg~~G---G~l~~--~~~~~~~l~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 396 (514)
++.||||.++.+| ||+++ ++++++.+....... ....+.+.+.+.++.++|... .+++.+.+++++++++++.
T Consensus 231 ~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~l~~~~~~~~~~~~~l~ 309 (398)
T PRK08363 231 VMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGP-MDYLEEYMKKLKERRDYIY 309 (398)
T ss_pred EEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHH
Confidence 8999999987778 99987 666666654332111 012256777777777777532 4567788899999999999
Q ss_pred HHHHhC-CCccccCCCcEEE-EEeCCC--ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHH
Q psy16848 397 NELIQI-GFPVEHTPSHIIP-IKIGNP--ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVT 472 (514)
Q Consensus 397 ~~L~~~-g~~~~~~~~~~~~-i~l~~~--~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~ 472 (514)
+.|+++ ++.+..+.++++. +.++.. .+..+++..+++++||.+.++..+. ..+++++|++++ .++++++++++
T Consensus 310 ~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~-~~~~~~iRis~~--~~~~~l~~~l~ 386 (398)
T PRK08363 310 KRLNEIPGISTTKPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFG-EYGAGHFRLVFL--PPVEILEEAMD 386 (398)
T ss_pred HHHhcCCCCEecCCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCeEEEEec--CCHHHHHHHHH
Confidence 999887 7666666666544 466642 2356676666579999999998654 334679999997 56899999999
Q ss_pred HHHHHHHH
Q psy16848 473 DLLAVWKS 480 (514)
Q Consensus 473 ~l~~~l~~ 480 (514)
+|++++++
T Consensus 387 ~l~~~~~~ 394 (398)
T PRK08363 387 RFEEFMRE 394 (398)
T ss_pred HHHHHHHH
Confidence 99998765
No 104
>PLN02187 rooty/superroot1
Probab=99.96 E-value=4.5e-26 Score=237.28 Aligned_cols=347 Identities=12% Similarity=0.086 Sum_probs=230.0
Q ss_pred CceeeecccC--CCC----CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC----CCcEEEEecccc
Q psy16848 17 NRVTCRLSSV--QYK----VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ----KEAGLVFTSCYV 86 (514)
Q Consensus 17 g~~~~d~~~~--~~~----~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~~~i~~~sGt~ 86 (514)
+..++++... ++. ..+++.+++.+.++. +.. ..+....|..++.+.+.+.+.+.++ .++.++++++++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~-~~~-~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~ 142 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS-GKG-NSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQ 142 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhC-CCC-CCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHH
Confidence 4567888644 322 246788888887764 211 1111223333344444444433222 234444455567
Q ss_pred ccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccch
Q psy16848 87 ANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPL 166 (514)
Q Consensus 87 a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (514)
++..++.+++. |||.|+++.++|......++..|.+++.++..
T Consensus 143 al~~~~~~l~~--pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~----------------------------------- 185 (462)
T PLN02187 143 GIEIVFESLAR--PNANILLPRPGFPHYDARAAYSGLEVRKFDLL----------------------------------- 185 (462)
T ss_pred HHHHHHHHhcC--CCCEEEEeCCCCccHHHHHHHcCCEEEEEeCc-----------------------------------
Confidence 78888888876 99999999999988766666666655543220
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
+.+++.
T Consensus 186 --------------------------------------------------------------------------~~~~~~ 191 (462)
T PLN02187 186 --------------------------------------------------------------------------PEKEWE 191 (462)
T ss_pred --------------------------------------------------------------------------cccCCc
Confidence 011222
Q ss_pred HHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccC-CCCCCccccCCCccCceE
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYG-EHGAGIGERDGQLHNMDI 322 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g-~~~~~~~~~~~~~~~~di 322 (514)
.+.+.+++..+++++++++++|+||||.+++ +++|.++|++||+++|+||+|....++ ....++..... ..+.+
T Consensus 192 ~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~--~~~vi 269 (462)
T PLN02187 192 IDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFAS--IVPVL 269 (462)
T ss_pred cCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhcc--CCcEE
Confidence 2233333344456899999999999999999 789999999999999999999954432 22212222221 13589
Q ss_pred EEcCCcccccCCC---eEEEec-H-H---HHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q psy16848 323 ISGTLGKAFGNIG---GYIVGT-K-N---FIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAY 394 (514)
Q Consensus 323 ~~~S~sK~lg~~G---G~l~~~-~-~---~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 394 (514)
+++||||.++.+| ||++++ + . +++.+......+..+.+.+.+.+.++.++|+.....++++.++.++++++.
T Consensus 270 ~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~ 349 (462)
T PLN02187 270 TLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDL 349 (462)
T ss_pred EEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 9999999998888 999873 3 2 334555544444333345788888888888643345678889999999999
Q ss_pred HHHHHHhCCC-c-cccCCC-cEEEEEeCC----C-ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHH
Q psy16848 395 LRNELIQIGF-P-VEHTPS-HIIPIKIGN----P-ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREM 466 (514)
Q Consensus 395 l~~~L~~~g~-~-~~~~~~-~~~~i~l~~----~-~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~ 466 (514)
+.+.|++.+. . +..+.+ .+++++++. . .+..+++..+++++||.+.|+..+. ..+++|++++ ..++.
T Consensus 350 l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg---~~~~iRis~~--~~~e~ 424 (462)
T PLN02187 350 VCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALG---LKNWMRITIG--VEAHM 424 (462)
T ss_pred HHHHHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccC---CCCeEEEEeC--CCHHH
Confidence 9999998743 2 223444 566666542 1 1355777776679999999998653 3579999998 46889
Q ss_pred HHHHHHHHHHHHHHcCC
Q psy16848 467 IDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 467 id~~~~~l~~~l~~~~~ 483 (514)
+++++++|.+++++..+
T Consensus 425 l~~al~rL~~~l~~~~~ 441 (462)
T PLN02187 425 LEDALERLKGFCTRHAK 441 (462)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 99999999999987654
No 105
>PRK06062 hypothetical protein; Provisional
Probab=99.96 E-value=1.7e-26 Score=239.11 Aligned_cols=220 Identities=20% Similarity=0.174 Sum_probs=163.8
Q ss_pred hhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccC
Q psy16848 245 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHN 319 (514)
Q Consensus 245 ~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~ 319 (514)
++.+++.++....+++++|++++++...|.+.| +++|+++|++||+++|+||+++ +|..|..+ ..+.+++ .
T Consensus 200 ~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~--a~~~~gv--~ 275 (451)
T PRK06062 200 LAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWF--AIEHFGV--V 275 (451)
T ss_pred HHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHH--HHHhcCC--C
Confidence 566677775443467899999999999999988 9999999999999999999999 54444321 2344555 7
Q ss_pred ceEEEcCCcccccC---CCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHH-HHH
Q psy16848 320 MDIISGTLGKAFGN---IGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIV-AYL 395 (514)
Q Consensus 320 ~di~~~S~sK~lg~---~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~-~~l 395 (514)
+|++ +++|.+++ +-|.+++++++.+.+........++++.+++.++++.++|+.+.++. ..++.+++. +++
T Consensus 276 PDi~--t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l 350 (451)
T PRK06062 276 PDLI--TFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEG---IVENAARIGAEVL 350 (451)
T ss_pred CCee--eechhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHH
Confidence 9998 89999976 22677888888887753221222355789999999999999986655 677777776 477
Q ss_pred HHHHHhC--CCcc---ccCCCcEEEEEeCCCc--------------cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEE
Q psy16848 396 RNELIQI--GFPV---EHTPSHIIPIKIGNPA--------------LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRL 456 (514)
Q Consensus 396 ~~~L~~~--g~~~---~~~~~~~~~i~l~~~~--------------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl 456 (514)
.+.|+++ ..+. +...|.++.+++.... ....+.+.|+ ++||++.+. .+.+|+
T Consensus 351 ~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gvl~~~~--------~~~lrl 421 (451)
T PRK06062 351 GPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACK-ERGLLPFVN--------GNRIHV 421 (451)
T ss_pred HHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHH-HCCcEEeec--------CCEEEE
Confidence 7777665 2332 3446667777764210 2446788886 899997531 347999
Q ss_pred EeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 457 APTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 457 ~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
+++..+|++|+++++++++++++.++
T Consensus 422 ~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 422 VPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred ECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998764
No 106
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.9e-26 Score=230.03 Aligned_cols=268 Identities=20% Similarity=0.210 Sum_probs=218.9
Q ss_pred CCceeeecCchhhHHHHHhhccCC--ceeeec----chHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecC
Q psy16848 195 GAGIGERDGQLHNMDIISGTLVNP--EVAIHA----SMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETV 268 (514)
Q Consensus 195 ~~g~~~~~G~~~~i~~~~~~l~~~--~v~~~~----~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~ 268 (514)
...|+.++|+++.|+.+..++..+ .++++. .|...+...|++++.++..++..+.+.+.+...++++++++++|
T Consensus 75 ~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~~~~lv~i~nP 154 (356)
T COG0079 75 PENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIRDKTKLVFLCNP 154 (356)
T ss_pred cceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccccccCHHHHHHhhhcCCCEEEEeCC
Confidence 355778999999999999999998 666654 66788899999999999655666655555555557999999999
Q ss_pred CCCCccccCHHHHHHHHHHc--CCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC---eEEEecHH
Q psy16848 269 HSMTGAICPLKELCEVSHQH--GALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYIVGTKN 343 (514)
Q Consensus 269 ~nptG~~~~l~~l~~l~~~~--gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~ 343 (514)
|||||...+.++|.+++... +.+||+||+|..... ... .+... ..++.+++.||||.+|..| ||++++++
T Consensus 155 NNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~-~~~---~~l~~-~~~nlivlRTfSKa~gLAGlRlGy~ia~~~ 229 (356)
T COG0079 155 NNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSP-ESS---LELLK-YPPNLIVLRTFSKAFGLAGLRVGYAIANPE 229 (356)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCC-chh---hhhcc-CCCCEEEEEecHHhhhcchhceeeccCCHH
Confidence 99999999988888777765 889999999994332 111 11111 2355899999999999988 99999999
Q ss_pred HHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCc-cccCCCcEEEEEeCCCc
Q psy16848 344 FIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFP-VEHTPSHIIPIKIGNPA 422 (514)
Q Consensus 344 ~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~i~l~~~~ 422 (514)
+++.+.+.+.+| +.|.+.++++.++++.- +.+++.++.+.+.++++.+.|+.+++. +.++.++|+.+++++..
T Consensus 230 ~i~~l~~vr~p~----~v~~~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~aNFvlv~~~~~~ 303 (356)
T COG0079 230 LIAALNKVRPPF----NVSSPALAAAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVFPSQANFVLVRVPDAE 303 (356)
T ss_pred HHHHHHHhcCCC----CCCHHHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcEEEEECCCcc
Confidence 999999999888 78899999999988743 677889999999999999999999854 67788999999988644
Q ss_pred cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 423 LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 423 ~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
...+.+.|+ ++||.++.... .+..++++|++++ |+++.++++++|++++..
T Consensus 304 -~~~l~~~L~-~~giivR~~~~--~~~~~~~lRitvg---t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 304 -AAALAEALL-KKGILVRDCSS--VGLLPGYLRITVG---TPEENDRLLAALREVLKG 354 (356)
T ss_pred -HHHHHHHHH-HCCEEEEeCCC--CCCCCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 567888896 89999997654 2334679999999 899999999999998764
No 107
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.96 E-value=2.5e-26 Score=224.23 Aligned_cols=325 Identities=20% Similarity=0.177 Sum_probs=238.0
Q ss_pred ChhHHHHHHHHHHHh-CCCCCCcCcccC--cchHHHHHHHHHHhHcCCC--cEEEEeccccccccchhhcc--c--cCCC
Q psy16848 31 PKGGRKCLGEALEKF-GTGAGGTRNISG--NSLFHEKLEEDVAKLHQKE--AGLVFTSCYVANDSTLFTLG--K--MIPG 101 (514)
Q Consensus 31 ~~~~~~a~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~la~~~~~~--~~i~~~sGt~a~~~~l~~l~--~--~~~g 101 (514)
+|++.+++...+... |.. ++...+| .....++.++.+++++|.+ +.+|+++||+++..+|...+ . ..+|
T Consensus 14 ~~~v~~~m~~~~~~~fgNP--sS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~ 91 (386)
T COG1104 14 DPEVLEAMLPYLTEVFGNP--SSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKG 91 (386)
T ss_pred CHHHHHHHHHHHHhhcCCc--cchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCC
Confidence 689999999999875 443 3344445 3677889999999999865 35666667999888887732 2 2368
Q ss_pred ceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEE
Q psy16848 102 LHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTF 181 (514)
Q Consensus 102 d~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (514)
.+|+++..+|+++++.++..
T Consensus 92 ~HIIts~iEH~aVl~~~~~L------------------------------------------------------------ 111 (386)
T COG1104 92 KHIITSAIEHPAVLNTCRYL------------------------------------------------------------ 111 (386)
T ss_pred CeEEEcccccHHHHHHHHHH------------------------------------------------------------
Confidence 89999999999999776544
Q ss_pred eeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-C----ChhHHHHHHhhcc
Q psy16848 182 VDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-N----DVNHLTQVLENMD 256 (514)
Q Consensus 182 ~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-~----d~~~l~~~l~~~~ 256 (514)
...|.++.+++. . +.+++++.|
T Consensus 112 -------------------------------------------------e~~g~~Vtyl~V~~~G~v~~e~L~~al---- 138 (386)
T COG1104 112 -------------------------------------------------ERQGFEVTYLPVDSNGLVDLEQLEEAL---- 138 (386)
T ss_pred -------------------------------------------------HhcCCeEEEeCCCCCCeEcHHHHHHhc----
Confidence 111223333331 1 344444444
Q ss_pred CCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-
Q psy16848 257 VKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG- 335 (514)
Q Consensus 257 ~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G- 335 (514)
.++|.+|.+.+.||.+|.+.|+++|.++|+++|+++++|.++++|.. +.+....+.|++.+|-||..|+.|
T Consensus 139 ~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gki--------pi~~~~~~vD~ls~SaHK~~GpkGi 210 (386)
T COG1104 139 RPDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKI--------PIDLEELGVDLLSFSAHKFGGPKGI 210 (386)
T ss_pred CCCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCce--------eccccccCcceEEeehhhccCCCce
Confidence 46699999999999999999999999999999999999999998875 233223368999999999999988
Q ss_pred eEEEecHHHHHHHHhhcCce-----EeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--CCcccc
Q psy16848 336 GYIVGTKNFIDTIRSYAAGF-----IFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI--GFPVEH 408 (514)
Q Consensus 336 G~l~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~ 408 (514)
|+++.++...- .+...+. ..+.+.+.+..+++.++++.. .+.++....++..+++++.+.|.+. .+.+..
T Consensus 211 GaLyv~~~~~~--~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a-~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g 287 (386)
T COG1104 211 GALYVRPGVRL--EPLIHGGGQERGLRSGTENVPGIVGFGKAAEIA-VEELEEENARLRKLRDRLEDGLLEIIPDVYLNG 287 (386)
T ss_pred EEEEECCCCcc--CceeccCcCCCCCCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcC
Confidence 99987654321 1111111 113355677777777777765 4566778889999999999999976 333322
Q ss_pred C----CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCC----------------CCcEEEEEeCCCCCHHHHH
Q psy16848 409 T----PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPV----------------GEEKIRLAPTPFHTREMID 468 (514)
Q Consensus 409 ~----~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~----------------~~~~iRl~~~~~~t~e~id 468 (514)
. -.+.+.+.++. ...+.+...| +.+||+++.|+.|.... ....+||+++..+|++|++
T Consensus 288 ~~~~rlP~~~~~~f~g-v~gE~ll~~L-~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~ 365 (386)
T COG1104 288 DDEPRLPNILNFSFPG-VEGESLLLAL-DLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEID 365 (386)
T ss_pred CcccCCCCeEEEEeCC-CcHHHHHHhc-cccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHH
Confidence 2 12366677765 3466677777 68999999999887542 1379999999999999999
Q ss_pred HHHHHHHHHHHHcCC
Q psy16848 469 KFVTDLLAVWKSLDL 483 (514)
Q Consensus 469 ~~~~~l~~~l~~~~~ 483 (514)
++++.+.+++++++.
T Consensus 366 ~~~~~l~~~i~~lr~ 380 (386)
T COG1104 366 AAAEALKEIIKRLRE 380 (386)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998753
No 108
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.96 E-value=2.6e-26 Score=236.42 Aligned_cols=342 Identities=16% Similarity=0.146 Sum_probs=227.0
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC---CCcEEEEeccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ---KEAGLVFTSCYVA 87 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~i~~~sGt~a 87 (514)
+|++|+|+.+. ..++ ||++.+++.+++++...... .....+...++.+++++++. .++++|++|||+|
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~----~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA 113 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAY----QIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEA 113 (421)
T ss_pred CCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccc----cccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHH
Confidence 56667776432 1223 89999999999998532211 11124566788889998864 3578999999999
Q ss_pred cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccc
Q psy16848 88 NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICP 165 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~ 165 (514)
++.|++.. +..+++++++.+++.||.. +.+.
T Consensus 114 ~e~AlklA----------------------------------------------r~~tgr~~ii~~~~~yHG~t~~~~s- 146 (421)
T PRK06777 114 VENAVKIA----------------------------------------------RAYTGRPGVIAFGGAFHGRTLLTMA- 146 (421)
T ss_pred HHHHHHHH----------------------------------------------HHhhCCCeEEEEcCCcCCccHHHHh-
Confidence 99999533 2334566677777777521 1110
Q ss_pred hhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec----
Q psy16848 166 LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR---- 241 (514)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~---- 241 (514)
-++.. .+ +.......-..+..++
T Consensus 147 ---------------------------~t~~~-------------------~~-------~~~~~~~~~~~~~~~~~p~~ 173 (421)
T PRK06777 147 ---------------------------LTGKV-------------------AP-------YKVGFGPFPGSIFHALYPNE 173 (421)
T ss_pred ---------------------------hcCCC-------------------cc-------cccCCCCCCCCcEEcCCCcc
Confidence 00000 00 0000000000011111
Q ss_pred ------CCChhHHHHHHhhc-cCCCceEEEEecCCCCCccc-cC---HHHHHHHHHHcCCEEEEecccc-ccccCCCCCC
Q psy16848 242 ------HNDVNHLTQVLENM-DVKIPKLVAFETVHSMTGAI-CP---LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAG 309 (514)
Q Consensus 242 ------~~d~~~l~~~l~~~-~~~~~~~vv~~~~~nptG~~-~~---l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~ 309 (514)
..+++.+++.+.+. ..++++++++++++++.|.. .| +++|+++|++||+++|+||+|+ +|+.|...
T Consensus 174 ~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~-- 251 (421)
T PRK06777 174 LHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLF-- 251 (421)
T ss_pred ccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchh--
Confidence 11345566666542 34568999999999999965 44 8999999999999999999999 55544311
Q ss_pred ccccCCCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHH
Q psy16848 310 IGERDGQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRA 386 (514)
Q Consensus 310 ~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 386 (514)
.....+. .+|++ +++|.+++ | |++++++++.+.+....... +++.+++.++++.++|+.+.++ ++.+
T Consensus 252 ~~~~~~~--~pDiv--~~sK~l~~-G~pigav~~~~~i~~~~~~~~~~~--T~~~~p~~~aaa~a~L~~~~~~---~l~~ 321 (421)
T PRK06777 252 AMEYYDV--KPDLI--TMAKSLGG-GMPISAVVGRAEVMDAPAPGGLGG--TYAGNPLAVAAALAVLDVIAEE---KLCQ 321 (421)
T ss_pred hhhhcCC--CCCEE--eeehhhcC-CCceEEEEEcHHHHhccCCCCCCC--CCCcCHHHHHHHHHHHHHHHhc---cHHH
Confidence 1223333 68888 89999985 6 89999999988876544333 5578999999999999987554 4788
Q ss_pred HHHHHHHHHHHHHHhC--CC---ccccCCCcEEEEEeCCC-------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEE
Q psy16848 387 KHQDIVAYLRNELIQI--GF---PVEHTPSHIIPIKIGNP-------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKI 454 (514)
Q Consensus 387 ~~~~~~~~l~~~L~~~--g~---~~~~~~~~~~~i~l~~~-------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~i 454 (514)
+.+++.+++.+.|+++ .. ..+.+.|.++.+++... .....+...++ ++||.+.++..+ .+.+
T Consensus 322 ~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~i~~~~~~-----g~~l 395 (421)
T PRK06777 322 RALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQAL-EEGLLLLSCGVH-----GNVI 395 (421)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHH-hCCeEEeecCCC-----CCEE
Confidence 8899999999888875 12 22456677777666431 11344555565 899999875421 3589
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 455 RLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 455 Rl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
|+.+++..+++++++++++|++++.
T Consensus 396 r~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 396 RFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998763
No 109
>PRK02948 cysteine desulfurase; Provisional
Probab=99.96 E-value=2.7e-26 Score=234.79 Aligned_cols=336 Identities=16% Similarity=0.159 Sum_probs=230.8
Q ss_pred eeecccCCCCCChhHHHHHHHHHHHhCCCCCCcCcc-cCcchHHHHHHHHHHhHcCCC-cEEEEec-cccccccchhhcc
Q psy16848 20 TCRLSSVQYKVPKGGRKCLGEALEKFGTGAGGTRNI-SGNSLFHEKLEEDVAKLHQKE-AGLVFTS-CYVANDSTLFTLG 96 (514)
Q Consensus 20 ~~d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~-~~i~~~s-Gt~a~~~~l~~l~ 96 (514)
|.|-++... -++.+.+++.+.++.+..+.++.... .......+++++.+++++|.+ +.+++++ +|+++..++.++.
T Consensus 3 yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~ 81 (381)
T PRK02948 3 YLDYAATTP-MSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLL 81 (381)
T ss_pred eccCCCCCC-CCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHH
Confidence 344444443 36789999999888654433322211 112467889999999999843 4555554 5788877776664
Q ss_pred c--cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhh
Q psy16848 97 K--MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSH 174 (514)
Q Consensus 97 ~--~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (514)
. ..+||.|++++.+|+++....+.
T Consensus 82 ~~~~~~g~~vv~~~~~h~s~~~~~~~------------------------------------------------------ 107 (381)
T PRK02948 82 NALPQNKKHIITTPMEHASIHSYFQS------------------------------------------------------ 107 (381)
T ss_pred HhccCCCCEEEECCcccHHHHHHHHH------------------------------------------------------
Confidence 2 24789999999999887644321
Q ss_pred hcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-----CChhHHH
Q psy16848 175 QHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-----NDVNHLT 249 (514)
Q Consensus 175 ~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~ 249 (514)
+...|++++.++. .|.+.++
T Consensus 108 -------------------------------------------------------~~~~g~~v~~v~~~~~~~~d~~~l~ 132 (381)
T PRK02948 108 -------------------------------------------------------LESQGYTVTEIPVDKSGLIRLVDLE 132 (381)
T ss_pred -------------------------------------------------------HHhCCCEEEEEeeCCCCCCCHHHHH
Confidence 1112333333331 1344444
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcc
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGK 329 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK 329 (514)
+.+ .++++++++++++||||.+.|+++|.++|+++|+++++|+++.+|... ......+.|++++|+||
T Consensus 133 ~~l----~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~--------~~~~~~~~d~~~~s~~K 200 (381)
T PRK02948 133 RAI----TPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLP--------IDVFEMGIDSLSVSAHK 200 (381)
T ss_pred Hhc----CCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccc--------cCcccCCCCEEEecHHh
Confidence 444 346889999999999999999999999999999999999999876531 11113478999999999
Q ss_pred cccCCC-eEEEecHHH-HHHHHhh---cCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCC
Q psy16848 330 AFGNIG-GYIVGTKNF-IDTIRSY---AAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGF 404 (514)
Q Consensus 330 ~lg~~G-G~l~~~~~~-~~~l~~~---~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 404 (514)
++|+.| |+++.++++ ...+... ...+ ...+.+.+.+.++.++++... +..++.+++++++++++.+.|+++++
T Consensus 201 ~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~-~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~ 278 (381)
T PRK02948 201 IYGPKGVGAVYINPQVRWKPVFPGTTHEKGF-RPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLPL 278 (381)
T ss_pred cCCCCcEEEEEEcCCCCCCCcccCCCCCCCc-CCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999888 888877654 1111100 0011 123567788888888888763 46778899999999999999999876
Q ss_pred ccccC--C----CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCC----------------CCCcEEEEEeCCCC
Q psy16848 405 PVEHT--P----SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVP----------------VGEEKIRLAPTPFH 462 (514)
Q Consensus 405 ~~~~~--~----~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~----------------~~~~~iRl~~~~~~ 462 (514)
++... . ..++.+.++. ....++...| +++||.++.+..|..+ ...+++|++++.++
T Consensus 279 ~v~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~ 356 (381)
T PRK02948 279 PIEVEGHSTSCLPHIIGVTIKG-IEGQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQT 356 (381)
T ss_pred CEEEeCCCccCcCCEEEEEeCC-CCHHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCC
Confidence 54422 1 1244444443 3456777788 5899999987754321 12479999999999
Q ss_pred CHHHHHHHHHHHHHHHHHc
Q psy16848 463 TREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 463 t~e~id~~~~~l~~~l~~~ 481 (514)
|++|++++++.|+++++.+
T Consensus 357 t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 357 TKDQIDTTIHALETIGNQF 375 (381)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987654
No 110
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.96 E-value=3e-26 Score=236.74 Aligned_cols=351 Identities=17% Similarity=0.170 Sum_probs=236.2
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|++|+||.+. ..+| ||++.+++.+++++....... .-..+...++.+++++.+. .++++|++||++|+
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~----~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~ 115 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFA----GFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAV 115 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCcccc----ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHH
Confidence 56666666432 2223 799999999999985432110 1124667889999999873 56789999999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
+.|++..... .-.+..++|+++|.+++.||....
T Consensus 116 e~A~klar~~----------------------------------------~~~~~~~~r~~ii~~~~~yHG~t~------ 149 (423)
T PRK05964 116 EVALKMALQY----------------------------------------WRNRGEPGRSRFLSLRGGYHGDTI------ 149 (423)
T ss_pred HHHHHHHHHH----------------------------------------HHhcCCCCCcEEEEEcCCcCCccH------
Confidence 9999654320 000112457788888888862110
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCC----
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHND---- 244 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d---- 244 (514)
|... +.+... ....+.. + ..+...++++.+|
T Consensus 150 --------------------~~ls----------------------~~~~~~-~~~~~~~-~-~~~~~~~~~~~~d~~~~ 184 (423)
T PRK05964 150 --------------------GTMS----------------------VGDRGG-MHALYTP-L-LFEQVTAPFPPDGYEQA 184 (423)
T ss_pred --------------------HHHh----------------------cCCCcc-ccccccC-c-CCCCEEeCCCcchhHHH
Confidence 0000 000000 0000000 0 0122334444455
Q ss_pred -hhHHHHHHhhccCCCceEEEEec-CCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCc-cccCCC
Q psy16848 245 -VNHLTQVLENMDVKIPKLVAFET-VHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGI-GERDGQ 316 (514)
Q Consensus 245 -~~~l~~~l~~~~~~~~~~vv~~~-~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~-~~~~~~ 316 (514)
.+.+++.+++. .+++++|++++ +++.+|...+ +++|+++|++||+++|+||+++ +|..| ..+ .+..+.
T Consensus 185 ~~~~l~~~l~~~-~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G---~~~a~~~~~v 260 (423)
T PRK05964 185 TLDALEALLEKH-AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG---TLFACEQAGV 260 (423)
T ss_pred HHHHHHHHHHhC-CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---chhHHHhcCC
Confidence 66777777643 35688999999 6888898875 8999999999999999999997 55444 222 233444
Q ss_pred ccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhh--cCc--eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHH
Q psy16848 317 LHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSY--AAG--FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQ 389 (514)
Q Consensus 317 ~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~--~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 389 (514)
.+|++ +++|++++.+ |++++++++.+.+... ... .+.+++.+++.++++.++++.+.++. +.++..
T Consensus 261 --~pDi~--~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~---~~~~~~ 333 (423)
T PRK05964 261 --SPDIM--CLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEP---VLERVA 333 (423)
T ss_pred --CCCee--eeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcC---HHHHHH
Confidence 78988 8899996522 7789999999887532 111 12234689999999999999886554 678888
Q ss_pred HHHHHHHHHHHhC-CCccc---cCCCcEEEEEeCCCc---cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCC
Q psy16848 390 DIVAYLRNELIQI-GFPVE---HTPSHIIPIKIGNPA---LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFH 462 (514)
Q Consensus 390 ~~~~~l~~~L~~~-g~~~~---~~~~~~~~i~l~~~~---~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~ 462 (514)
++.+++++.|+++ +.+.+ ...+.++.+.+.+.. ....+.+.|+ ++||.+.+. .+.+|++++..+
T Consensus 334 ~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~-~~Gv~v~~~--------~~~lR~~p~l~~ 404 (423)
T PRK05964 334 ALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGPALRAFAL-ERGVLLRPL--------GNTIYLMPPYII 404 (423)
T ss_pred HHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcchhHHHHHHHHHH-HCCeEEEec--------CCEEEEeCCccc
Confidence 8899999888876 43332 345667778876532 3567888886 899999742 247999999999
Q ss_pred CHHHHHHHHHHHHHHHHHc
Q psy16848 463 TREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 463 t~e~id~~~~~l~~~l~~~ 481 (514)
|++|+|+++++++++++++
T Consensus 405 t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 405 TAEELDRITDAIVEVADEL 423 (423)
T ss_pred CHHHHHHHHHHHHHHHhhC
Confidence 9999999999999998763
No 111
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.96 E-value=2.8e-26 Score=236.68 Aligned_cols=355 Identities=16% Similarity=0.175 Sum_probs=226.2
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC---CCcEEEEeccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ---KEAGLVFTSCYVA 87 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~i~~~sGt~a 87 (514)
+|++|+||.+. ..+| ||++.+++.+++++...... .....+...++.+++++++. .++++|++||++|
T Consensus 31 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~----~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA 106 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCF----MVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEA 106 (420)
T ss_pred CCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccc----cccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHH
Confidence 66677777432 2223 89999999999998532211 11123556788888988873 3578899999999
Q ss_pred cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccc
Q psy16848 88 NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICP 165 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~ 165 (514)
++.|++.. +..+++++++.++++||.. +.+.
T Consensus 107 ~e~AlklA----------------------------------------------r~~tgr~~ii~~~~~yHG~t~~~~~- 139 (420)
T TIGR00700 107 VENAVKIA----------------------------------------------RSYTGRPGVVAFDHGFHGRTNMTMA- 139 (420)
T ss_pred HHHHHHHH----------------------------------------------HHhcCCCcEEEECCCcCCCcHHHHH-
Confidence 99999533 3334566777777777621 1110
Q ss_pred hhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC--ceeeecchHHHHhhCCCCEEEecCC
Q psy16848 166 LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP--EVAIHASMIQGIRNSSAPKIIYRHN 243 (514)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~--~v~~~~~~~~~~~~~g~~~~~v~~~ 243 (514)
+. |.......+ ...+... .++.|..+.... +.. ..+.+
T Consensus 140 ------~~---------------~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~ 179 (420)
T TIGR00700 140 ------LT---------------AKVMPYKSG--------------FGPFAPEVYRAPLPYPYRDGL---LDK--QLSTD 179 (420)
T ss_pred ------hc---------------CCCcccccC--------------CCCCCCCcEEeCCCccccccc---ccc--chhHH
Confidence 00 000000000 0000000 011111110000 000 00111
Q ss_pred -ChhHHHHHHh-hccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCC
Q psy16848 244 -DVNHLTQVLE-NMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQ 316 (514)
Q Consensus 244 -d~~~l~~~l~-~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~ 316 (514)
+++.+++.+. +...+++++|++++++..+|..++ +++|+++|++||+++|+||+|+ +++.|... .....+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~--a~~~~~~ 257 (420)
T TIGR00700 180 GELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMF--ACEHEGP 257 (420)
T ss_pred HHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhH--HHhhcCC
Confidence 2445566553 223467899999999999999887 8999999999999999999999 55554311 1122333
Q ss_pred ccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy16848 317 LHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVA 393 (514)
Q Consensus 317 ~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 393 (514)
.+|++ +++|.+++ | |++++++++.+.+....... +.+.+++.++++.++++.+.++. ..++.+++.+
T Consensus 258 --~pDi~--~lsK~l~~-G~pig~v~~~~~i~~~~~~~~~~~--T~~~~pl~~aaa~a~l~~l~~~~---~~~~~~~~g~ 327 (420)
T TIGR00700 258 --EPDLI--TTAKSLAD-GLPLSGVTGRAEIMDAPAPGGLGG--TYAGNPLACAAALAVLAIIESEG---LIERARQIGR 327 (420)
T ss_pred --CCCEE--EeeccccC-CcceEEEEecHHHHhhcCCCCcCC--CCCcCHHHHHHHHHHHHHHHhcc---HHHHHHHHHH
Confidence 78888 79999985 6 99999999988876543333 55788999999999999876555 5556666666
Q ss_pred HHHHHHHhC----C-CccccCCCcEEEEEeCCC-------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCC
Q psy16848 394 YLRNELIQI----G-FPVEHTPSHIIPIKIGNP-------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPF 461 (514)
Q Consensus 394 ~l~~~L~~~----g-~~~~~~~~~~~~i~l~~~-------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~ 461 (514)
++++.|+++ + +..+.+.|.++.+++.+. .....+...++ ++||.+.|+..+ .+.+|++++..
T Consensus 328 ~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~i~p~~~f-----~~~lRl~p~l~ 401 (420)
T TIGR00700 328 LVTDRLTTLKAVDPRIGDVRGLGAMIAVELVDPGTTEPDAGLAERIATAAH-AAGLLLLTCGMF-----GNIIRFLPPLT 401 (420)
T ss_pred HHHHHHHHHHhhCCCEEEeeccceEEEEEEecCCCCCccHHHHHHHHHHHH-HCCeEEeccCCC-----CCEEEEECCCC
Confidence 666666554 2 223345677888876321 22455666674 899999876432 36899999888
Q ss_pred CCHHHHHHHHHHHHHHHH
Q psy16848 462 HTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 462 ~t~e~id~~~~~l~~~l~ 479 (514)
++++++++++++|++++.
T Consensus 402 ~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 402 IGDELLSEGLDILCAILA 419 (420)
T ss_pred cCHHHHHHHHHHHHHHhh
Confidence 899999999999998874
No 112
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.95 E-value=2.9e-26 Score=236.47 Aligned_cols=347 Identities=16% Similarity=0.124 Sum_probs=226.8
Q ss_pred CceeeecccCC--CCCChhHHHHHHHHHHHhCC--CCCCcCcccCcchHHHHHHHHHHhHcCC---CcEEEEeccccccc
Q psy16848 17 NRVTCRLSSVQ--YKVPKGGRKCLGEALEKFGT--GAGGTRNISGNSLFHEKLEEDVAKLHQK---EAGLVFTSCYVAND 89 (514)
Q Consensus 17 g~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~la~~~~~---~~~i~~~sGt~a~~ 89 (514)
+..++|+..++ +..+|.+.+++.+.+..... ...++....|..++.+.+.+.+.+..|. +..|++|+|++..+
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al 112 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDT 112 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHH
Confidence 45678886543 33467889999888876321 1112222334455555555554443332 34566777766543
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.++..+.. +||.|+++.++|......++..|.+.+..+. |.|
T Consensus 113 ~~l~~~~~--~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~------------------------~~~------------ 154 (409)
T PRK07590 113 GNILDIFG--PDNTIAVTDPVYPVYVDTNVMAGRTGEANED------------------------GRY------------ 154 (409)
T ss_pred HHHHHhcC--CCCEEEEeCCCCcchHHHHHHcCCccccccc------------------------ccc------------
Confidence 34445544 9999999999999998888877765221000 000
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC---CChh
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH---NDVN 246 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~---~d~~ 246 (514)
.+++.++. +++.
T Consensus 155 -----------------------------------------------------------------~~~~~v~~~~~~~~~ 169 (409)
T PRK07590 155 -----------------------------------------------------------------SGIVYLPCTAENNFV 169 (409)
T ss_pred -----------------------------------------------------------------cceeEeecccccCCc
Confidence 01112211 0111
Q ss_pred HHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC-CCCCccccCCCccCceE
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE-HGAGIGERDGQLHNMDI 322 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~-~~~~~~~~~~~~~~~di 322 (514)
.. + ..++++++++++||||||.+++ +++|.++|++|++++|+||+|....... ...++..... ..+..+
T Consensus 170 ~d---~---~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~-~~~~vi 242 (409)
T PRK07590 170 PE---L---PEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEG-ARECAI 242 (409)
T ss_pred cc---C---cccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCC-cccceE
Confidence 00 1 1246889999999999999999 6888899999999999999999433221 1112222211 124578
Q ss_pred EEcCCcccccCCC---eEEEecHHHHHHH-----------HhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHH
Q psy16848 323 ISGTLGKAFGNIG---GYIVGTKNFIDTI-----------RSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKH 388 (514)
Q Consensus 323 ~~~S~sK~lg~~G---G~l~~~~~~~~~l-----------~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 388 (514)
+++||||.+|.+| ||+++++++++.+ ........+ .+.+.+.+.++..+++.....++++.++.+
T Consensus 243 ~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~ 321 (409)
T PRK07590 243 EFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKF-NGVSYIVQRAAEAVYSPEGKAQIKELIDYY 321 (409)
T ss_pred EEecCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcc-cCcCHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 8999999998768 9999999988732 111111111 145677777777777532234667788899
Q ss_pred HHHHHHHHHHHHhCCCccccC-CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHH
Q psy16848 389 QDIVAYLRNELIQIGFPVEHT-PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMI 467 (514)
Q Consensus 389 ~~~~~~l~~~L~~~g~~~~~~-~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~i 467 (514)
+++++.+.+.|++.++.+..+ .+.+++++++...+..++++.+++++||.+.|+..+. ..+.+++|+++. .+++++
T Consensus 322 ~~~r~~l~~~L~~~~~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~-~~~~~~iRi~~~--~~~~~l 398 (409)
T PRK07590 322 MENAKIIREGLESAGFEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFG-PSGEGYFRLSAF--GSRENV 398 (409)
T ss_pred HHHHHHHHHHHHhcCCceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhC-CCCCCEEEEEcc--CCHHHH
Confidence 999999999999988776655 4558889988655677888888767899999998653 334679999964 478999
Q ss_pred HHHHHHHHHH
Q psy16848 468 DKFVTDLLAV 477 (514)
Q Consensus 468 d~~~~~l~~~ 477 (514)
++++++|.++
T Consensus 399 ~~~l~rl~~~ 408 (409)
T PRK07590 399 LEAMERIKKA 408 (409)
T ss_pred HHHHHHHHhh
Confidence 9999999865
No 113
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.95 E-value=5.8e-26 Score=233.79 Aligned_cols=338 Identities=11% Similarity=0.083 Sum_probs=228.9
Q ss_pred CCceeeecccCCC------CCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC-------CCcEEEEe
Q psy16848 16 SNRVTCRLSSVQY------KVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ-------KEAGLVFT 82 (514)
Q Consensus 16 ~g~~~~d~~~~~~------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-------~~~~i~~~ 82 (514)
.|+.++++..+.. ...+.+.+++.+.+.... ..++....|. .++++.++++++ .+..++++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~----~~lr~aia~~~~~~~~~~~~~~i~~t~ 102 (401)
T TIGR01264 29 PEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGK--YNGYAPTVGA----LSAREAIASYYHNPDGPIEADDVVLCS 102 (401)
T ss_pred cCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccC--CCCCCCCCCC----HHHHHHHHHHHhhcCCCCCHHHEEECc
Confidence 4567788865443 346788888888776421 1111122233 445555555554 23455555
Q ss_pred ccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCC
Q psy16848 83 SCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGA 162 (514)
Q Consensus 83 sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (514)
++++++..++.++.. +||.|+++.++|......++..|.+++.++....
T Consensus 103 G~~~al~~~~~~l~~--~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~----------------------------- 151 (401)
T TIGR01264 103 GCSHAIEMCIAALAN--AGQNILVPRPGFPLYETLAESMGIEVKLYNLLPD----------------------------- 151 (401)
T ss_pred ChHHHHHHHHHHhCC--CCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCc-----------------------------
Confidence 667788888888866 9999999999998877777766766554432100
Q ss_pred ccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC
Q psy16848 163 ICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH 242 (514)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~ 242 (514)
++. .
T Consensus 152 -------------------------------~~~---------------------------------------------~ 155 (401)
T TIGR01264 152 -------------------------------KSW---------------------------------------------E 155 (401)
T ss_pred -------------------------------cCC---------------------------------------------C
Confidence 000 0
Q ss_pred CChhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCcc
Q psy16848 243 NDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLH 318 (514)
Q Consensus 243 ~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~ 318 (514)
-|.+.+++.+ .++++++++++|+||||.+++ +++|.++|+++|+++|+||+|..... +....++..... .
T Consensus 156 ~d~~~l~~~~----~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~ 229 (401)
T TIGR01264 156 IDLKQLESLI----DEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSS--T 229 (401)
T ss_pred CCHHHHHHHh----ccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCC--C
Confidence 1334444433 335789999999999999998 78999999999999999999994433 222212222221 1
Q ss_pred CceEEEcCCcccccCCC---eEEEecH------HHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHH
Q psy16848 319 NMDIISGTLGKAFGNIG---GYIVGTK------NFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQ 389 (514)
Q Consensus 319 ~~di~~~S~sK~lg~~G---G~l~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 389 (514)
...++++||||.++.+| ||+++++ ++++.+...... ..+.+.+.+.++...++...+.++++.++.++
T Consensus 230 ~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~ 306 (401)
T TIGR01264 230 VPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQR---ILGPCTIVQGALPSILLRTPQEYFDGTLSVLE 306 (401)
T ss_pred CcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhc---cCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 24789999999988878 9999863 344444443221 12456777888777776432456778889999
Q ss_pred HHHHHHHHHHHhC-CCccccC-CCcEEEEEeCC-----CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCC
Q psy16848 390 DIVAYLRNELIQI-GFPVEHT-PSHIIPIKIGN-----PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFH 462 (514)
Q Consensus 390 ~~~~~l~~~L~~~-g~~~~~~-~~~~~~i~l~~-----~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~ 462 (514)
++++.+.+.|+++ ++.+..+ .+.++++.++. ..+..++++.+++++||.+.|+..+. ..+++|++++ .
T Consensus 307 ~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~---~~~~iRis~~--~ 381 (401)
T TIGR01264 307 SNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFE---YPGFFRVVLT--V 381 (401)
T ss_pred HHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcC---CCCeEEEEEc--C
Confidence 9999999999988 7665444 45577777642 22467788888667899999988643 2579999998 3
Q ss_pred CHHHHHHHHHHHHHHHHH
Q psy16848 463 TREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 463 t~e~id~~~~~l~~~l~~ 480 (514)
.++++++++++|.+++++
T Consensus 382 ~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 382 PVVMMEEACSRIQEFCER 399 (401)
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 688999999999998865
No 114
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.95 E-value=2.9e-26 Score=232.49 Aligned_cols=296 Identities=20% Similarity=0.216 Sum_probs=215.5
Q ss_pred chHHHHHHHHHHhHcCCC--c-EEEEeccccccccchhhccccCCCceEEecCccchhh--hhhhhcCCCCeeeccCCCh
Q psy16848 59 SLFHEKLEEDVAKLHQKE--A-GLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASM--IQGIRNSSAPKIIYRHNDV 133 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~--~-~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~--~~~~~~~~~~~~~~~~~d~ 133 (514)
.+..+++++.+++++|.+ + .+++.|||+++..++.++.. +||.|+++.+.|.+. ...++..|++++.++.+..
T Consensus 31 ~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~--~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 108 (356)
T cd06451 31 LALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLE--PGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWG 108 (356)
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCC--CCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCC
Confidence 466889999999999973 3 45667779999888888865 999999988877663 3334444544443321000
Q ss_pred HHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHh
Q psy16848 134 NHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISG 213 (514)
Q Consensus 134 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~ 213 (514)
T Consensus 109 -------------------------------------------------------------------------------- 108 (356)
T cd06451 109 -------------------------------------------------------------------------------- 108 (356)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEE
Q psy16848 214 TLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTF 293 (514)
Q Consensus 214 ~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li 293 (514)
...|.+.+++.+++ .+++++++++++||+|.+.|+++|.++|+++|++++
T Consensus 109 ---------------------------~~~~~~~l~~~i~~---~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li 158 (356)
T cd06451 109 ---------------------------EAVSPEEIAEALEQ---HDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLI 158 (356)
T ss_pred ---------------------------CCCCHHHHHHHHhc---cCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEE
Confidence 01144555555532 257899999999999999999999999999999999
Q ss_pred EeccccccccCCCCCCccccCCCccCceEEEcCCcccccC-CC-eEEEecHHHHHHHHh--hcCce--------------
Q psy16848 294 VDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN-IG-GYIVGTKNFIDTIRS--YAAGF-------------- 355 (514)
Q Consensus 294 ~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~-~G-G~l~~~~~~~~~l~~--~~~~~-------------- 355 (514)
+|++|++|... + +.. ..+.|++++|+||+++. .| |+++.++++++.+.. ....+
T Consensus 159 ~D~~~~~g~~~-----~-~~~--~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (356)
T cd06451 159 VDAVSSLGGEP-----F-RMD--EWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEG 230 (356)
T ss_pred EeeehhccCcc-----c-ccc--ccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhccc
Confidence 99999866431 1 111 23678999999999975 35 999999998887763 11111
Q ss_pred -EeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCC---Cc-EEEEEeCCCccHHHHHHH
Q psy16848 356 -IFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTP---SH-IIPIKIGNPALNTKICDM 430 (514)
Q Consensus 356 -~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~-~~~i~l~~~~~~~~~~~~ 430 (514)
..+.+.+...+.++.++++.+...+++++.++.+++.+++.+.|++.|+.+..+. .+ ++++.++...+..++++.
T Consensus 231 ~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (356)
T cd06451 231 YSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEGVDGDEVVRR 310 (356)
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCCCCHHHHHHH
Confidence 1122345566677788888876667788899999999999999998887665321 23 345666655567889999
Q ss_pred HHHhC-CeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 431 LLKEK-GHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 431 Ll~~~-GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
|. ++ ||.++++..+. ..+++|++++..+|++|+++++++|++++
T Consensus 311 L~-~~~gI~~~~g~~~~---~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 311 LM-KRYNIEIAGGLGPT---AGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred HH-HhCCEEEecccccc---cCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 95 77 99999876432 24599999999999999999999999875
No 115
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.5e-26 Score=234.37 Aligned_cols=319 Identities=13% Similarity=0.103 Sum_probs=226.5
Q ss_pred Cceeeeccc--CCCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-cEEEEecc-ccccccch
Q psy16848 17 NRVTCRLSS--VQYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-AGLVFTSC-YVANDSTL 92 (514)
Q Consensus 17 g~~~~d~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~i~~~sG-t~a~~~~l 92 (514)
+...+|++. +.+..+|.+.+++.+.+.... .+ . .....++++.++++++.+ ..+++++| ++++..++
T Consensus 28 ~~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~------~Y--p-~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~ 98 (366)
T PRK01533 28 DHSFVKLASNENPFGCSPRVLDELQKSWLDHA------LY--P-DGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIIS 98 (366)
T ss_pred CCceEEeCCCCCCCCCCHHHHHHHHHHHHhcC------cC--C-CCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHH
Confidence 345678854 344457889998888765421 11 1 122467888888888754 34555555 55677777
Q ss_pred hhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhh
Q psy16848 93 FTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEV 172 (514)
Q Consensus 93 ~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (514)
.++.. +||.|+++.++|......++..|.+++.++.++.
T Consensus 99 ~~l~~--~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~--------------------------------------- 137 (366)
T PRK01533 99 RAVLK--AGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNG--------------------------------------- 137 (366)
T ss_pred HHhcC--CCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCC---------------------------------------
Confidence 77766 9999999999998888777766666654432100
Q ss_pred hhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHH
Q psy16848 173 SHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVL 252 (514)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l 252 (514)
.-|.+.+++.+
T Consensus 138 ---------------------------------------------------------------------~~d~~~l~~~~ 148 (366)
T PRK01533 138 ---------------------------------------------------------------------VYDLDEISSVV 148 (366)
T ss_pred ---------------------------------------------------------------------CcCHHHHHHHh
Confidence 01334444433
Q ss_pred hhccCCCceEEEEecCCCCCccccCHHHHHHH---HHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcc
Q psy16848 253 ENMDVKIPKLVAFETVHSMTGAICPLKELCEV---SHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGK 329 (514)
Q Consensus 253 ~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l---~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK 329 (514)
+++++++++++||||||.+++.+++.++ |++++ ++|+||+|..........+...... ..+..+++.||||
T Consensus 149 ----~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~-~~~~vi~~~SfSK 222 (366)
T PRK01533 149 ----DNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLE-KHKNILVLRTFSK 222 (366)
T ss_pred ----CcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhc-cCCCEEEEeCchH
Confidence 3457899999999999999996555554 44555 6778999983322211111111111 2357899999999
Q ss_pred cccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCcc
Q psy16848 330 AFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPV 406 (514)
Q Consensus 330 ~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 406 (514)
.+|.+| ||+++++++++.+...... .+.+.+.+.++.++|+ ..+..++.++..+++++++.+.++.+|+++
T Consensus 223 ~~~l~GlRiG~~i~~~~~~~~l~~~~~~----~~~~~~~q~aa~~~l~--~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~ 296 (366)
T PRK01533 223 AYGLASFRVGYAVGHEELIEKLNVVRLP----FNVSSLAQKAATIAFG--DDEFIEEIVRVNTEGLRQYESFCKENEIPF 296 (366)
T ss_pred HhcChHHHHhHHhCCHHHHHHHHHhcCC----CCcCHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 999778 9999999999998776533 3678888988888886 234556677788888888889998889888
Q ss_pred ccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 407 EHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 407 ~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
..+.++|+++.+++ ..++.+.|+ ++||.|++. .+++|++++ +.+++++++++|+++++..
T Consensus 297 ~~~~~nf~~~~~~~---~~~~~~~l~-~~GI~Vr~~--------~~~iRis~~---~~~~~~~l~~al~~~~~~~ 356 (366)
T PRK01533 297 YQSQTNFIFLPVEN---GGEIYEACA-HAGFIIRPF--------PNGVRITVG---TREQNEGVISVLQQHFENK 356 (366)
T ss_pred CCCcCcEEEEeCCC---HHHHHHHHH-HCCcEEccC--------CCceEEeCC---CHHHHHHHHHHHHHHHHhc
Confidence 88888899988753 568888896 999999862 358999999 8999999999999987654
No 116
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=3.5e-26 Score=235.33 Aligned_cols=337 Identities=18% Similarity=0.199 Sum_probs=226.3
Q ss_pred eeeecccCCCCCChhHHHHHHHHHHHhCCCCCCc-CcccCcchHHHHHHHHHHhHcCCCc--EEEEeccccccccchhhc
Q psy16848 19 VTCRLSSVQYKVPKGGRKCLGEALEKFGTGAGGT-RNISGNSLFHEKLEEDVAKLHQKEA--GLVFTSCYVANDSTLFTL 95 (514)
Q Consensus 19 ~~~d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~--~i~~~sGt~a~~~~l~~l 95 (514)
.+.|.++... .++.+.+++.+.+..+....++. ....+..+..+++++.+++++|.+. .++++++|+++..++.++
T Consensus 19 ~yl~~~~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~ 97 (397)
T TIGR01976 19 VFFDNPAGTQ-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAI 97 (397)
T ss_pred EEecCCccCC-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHH
Confidence 4555544332 36789999999988754332222 1122334678899999999998653 454555666655555444
Q ss_pred cc-cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhh
Q psy16848 96 GK-MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSH 174 (514)
Q Consensus 96 ~~-~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (514)
.. .+|||+|++.++.|.++...+.
T Consensus 98 ~~~~~~gd~vl~~~~~~~s~~~~~~------------------------------------------------------- 122 (397)
T TIGR01976 98 SRRWGPGDEVIVTRLDHEANISPWL------------------------------------------------------- 122 (397)
T ss_pred HhcCCCCCEEEEcCCchHhHHHHHH-------------------------------------------------------
Confidence 21 3499999999999988753220
Q ss_pred hcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCC--ChhHHHHHH
Q psy16848 175 QHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHN--DVNHLTQVL 252 (514)
Q Consensus 175 ~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~--d~~~l~~~l 252 (514)
..+...|++++.++.+ +.....+.+
T Consensus 123 -----------------------------------------------------~~~~~~g~~~~~~~~~~~~~~~~~~~l 149 (397)
T TIGR01976 123 -----------------------------------------------------QAAERAGAKVKWARVDEATGELHPDDL 149 (397)
T ss_pred -----------------------------------------------------HHHHhcCCEEEEEeccccCCCcCHHHH
Confidence 1111223333333311 111222333
Q ss_pred hhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc
Q psy16848 253 ENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG 332 (514)
Q Consensus 253 ~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg 332 (514)
++..+++++++++++++||+|...|+++|.++|+++|+++++|+++..+.. ..+.. ..++|++++|+||++|
T Consensus 150 ~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~------~~~~~--~~~~d~~~~s~~K~~g 221 (397)
T TIGR01976 150 ASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHG------LIDVQ--ATGADFLTCSAYKFFG 221 (397)
T ss_pred HHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhcccc------CCCHH--HcCCCEEEEechhhcC
Confidence 333345689999999999999999999999999999999999999975431 11111 3478999999999998
Q ss_pred CCCeEEEecHHHHHHHHhhcCceEec--------cCCcHHHHHHHHHHHHHhhhch--------------HHHHHHHHHH
Q psy16848 333 NIGGYIVGTKNFIDTIRSYAAGFIFT--------TSLPPTVLAGAREAIRILSSQE--------------GVELRAKHQD 390 (514)
Q Consensus 333 ~~GG~l~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~a~~~~l~~~~~~~--------------~~~~~~~~~~ 390 (514)
+..|++++++++++.+.+....+.+. .+.+....+++.++++.+.+.+ +++++++..+
T Consensus 222 ~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 301 (397)
T TIGR01976 222 PHMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENR 301 (397)
T ss_pred CceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHH
Confidence 75599999999888776543322111 1334455666667777664332 5667788888
Q ss_pred HHHHHHHHHHhC-CCccccC-----CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCC--------CCCCCcEEEE
Q psy16848 391 IVAYLRNELIQI-GFPVEHT-----PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPT--------VPVGEEKIRL 456 (514)
Q Consensus 391 ~~~~l~~~L~~~-g~~~~~~-----~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~--------~~~~~~~iRl 456 (514)
+.+++.+.|+++ ++.+..+ .++++.+.++. .+..++.++| +++||.++.+..|. .+...+++|+
T Consensus 302 l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRi 379 (397)
T TIGR01976 302 LAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHG-LPPQRVVRRL-ADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRV 379 (397)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCC-cCHHHHHHHH-HHCCeEEEeCccchHHHHHHhCCCCCCCeEEE
Confidence 999999999887 4766543 45677777653 3467899999 48999999775432 2223568999
Q ss_pred EeCCCCCHHHHHHHHHHH
Q psy16848 457 APTPFHTREMIDKFVTDL 474 (514)
Q Consensus 457 ~~~~~~t~e~id~~~~~l 474 (514)
+++.++|++|+++++++|
T Consensus 380 s~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 380 GLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred EeeccCCHHHHHHHHHhC
Confidence 999999999999999864
No 117
>PRK06541 hypothetical protein; Provisional
Probab=99.95 E-value=6.8e-26 Score=234.89 Aligned_cols=370 Identities=16% Similarity=0.095 Sum_probs=234.6
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|+.|+||.+. ..+| ||++.+++.+++++...... . ....+...++.+++++.+. .++++|++||++|+
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~-~---~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAv 125 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPL-W---SYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAV 125 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccc-c---ccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHH
Confidence 56667776432 2233 79999999999998543221 1 1124677889999999864 45788899999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccch
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICPL 166 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~ 166 (514)
+.|++..... + . .....++.+++.+++.||.. +.+..
T Consensus 126 e~AlklAr~~------------~---------------------------~-~~g~~~r~~ii~~~~~yHG~t~~a~s~- 164 (460)
T PRK06541 126 ESAWKLAKQY------------F---------------------------K-LTGKPGKHKVISRAIAYHGTTQGALAI- 164 (460)
T ss_pred HHHHHHHHHH------------H---------------------------H-hcCCCCccEEEEEcCcccCcchhhhcC-
Confidence 9999644310 0 0 00112356778888888621 21110
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
.+.. ........+.....-+|.++.......+-..........+
T Consensus 165 ---------------------------~~~~---------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (460)
T PRK06541 165 ---------------------------TGLP---------AFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAAD 208 (460)
T ss_pred ---------------------------cCCh---------hhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHH
Confidence 0000 0000000000000000000000000000000000000124
Q ss_pred HHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCce
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMD 321 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~d 321 (514)
.+++.+++...+++++|+++++++++|.+.+ +++|+++|++||+++|+||+++ +|..|..+ ..+.+++ .+|
T Consensus 209 ~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~--a~~~~gv--~PD 284 (460)
T PRK06541 209 RIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF--GCERFGY--VPD 284 (460)
T ss_pred HHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhh--hhhhcCC--CCC
Confidence 5666665433456899999999999999988 9999999999999999999996 77665432 1233444 789
Q ss_pred EEEcCCcccccC---CCeEEEecHHHHHHHHhhcCc--eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q psy16848 322 IISGTLGKAFGN---IGGYIVGTKNFIDTIRSYAAG--FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLR 396 (514)
Q Consensus 322 i~~~S~sK~lg~---~GG~l~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 396 (514)
++ +++|++++ +-|++++++++.+.+...... ...+++.+++.++++.++++.+.++. ..++++++.+++.
T Consensus 285 iv--t~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~---~~~~~~~~g~~l~ 359 (460)
T PRK06541 285 II--TCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREG---LLDHVRDNEPAFR 359 (460)
T ss_pred EE--EecccccCCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHH
Confidence 98 79999985 127888898888877543222 22356789999999999999886554 6788999999999
Q ss_pred HHHHhC-CCcc---ccCCCcEEEEEeCCCc---------c-----HHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEe
Q psy16848 397 NELIQI-GFPV---EHTPSHIIPIKIGNPA---------L-----NTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAP 458 (514)
Q Consensus 397 ~~L~~~-g~~~---~~~~~~~~~i~l~~~~---------~-----~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~ 458 (514)
+.|+++ ..++ +...|.++.+++.+.. . ...+...|+ ++||.+.+. +.+.+.+|+++
T Consensus 360 ~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-----~~g~~~lrl~P 433 (460)
T PRK06541 360 ATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALF-EAGLYCRAD-----DRGDPVVQLAP 433 (460)
T ss_pred HHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHH-hCCeEEEec-----CCCCCEEEEEC
Confidence 999886 3333 3456778888773210 0 124667786 899999752 22346899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 459 TPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 459 ~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+..+|++|+++++++++++++++
T Consensus 434 pl~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 434 PLISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998764
No 118
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=5e-26 Score=234.10 Aligned_cols=336 Identities=21% Similarity=0.248 Sum_probs=231.5
Q ss_pred cCCceeeeccc---CCCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccc
Q psy16848 15 KSNRVTCRLSS---VQYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAND 89 (514)
Q Consensus 15 ~~g~~~~d~~~---~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~ 89 (514)
.+|+.++|+.+ +.+++ ||++.+++.+++++..... . ....+...+++++++++.+.+++++++||++|+.
T Consensus 36 ~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~---~~~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~ 110 (396)
T PRK02627 36 DDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTS--N---LYYIEPQEELAEKLVELSGMDKVFFCNSGAEANE 110 (396)
T ss_pred CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccc--c---ccCCHHHHHHHHHHHhhcCCCEEEECCCcHHHHH
Confidence 37788888865 44555 5999999999998743211 1 1235788999999999999999999999999999
Q ss_pred cchhhccccC-C----CceEE-ecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCc
Q psy16848 90 STLFTLGKMI-P----GLHYI-SDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAI 163 (514)
Q Consensus 90 ~~l~~l~~~~-~----gd~v~-~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 163 (514)
.+++.+...+ + .+.|+ .+..+|.....++...+....... |
T Consensus 111 ~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~---------------------------~------ 157 (396)
T PRK02627 111 AAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEG---------------------------F------ 157 (396)
T ss_pred HHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCcccccc---------------------------C------
Confidence 9998664311 1 14454 445555444443333222110000 0
Q ss_pred cchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCC
Q psy16848 164 CPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHN 243 (514)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~ 243 (514)
......+..++.+
T Consensus 158 -------------------------------------------------------------------~~~~~~~~~~~~~ 170 (396)
T PRK02627 158 -------------------------------------------------------------------EPLVEGFIYVPFN 170 (396)
T ss_pred -------------------------------------------------------------------CCCCCCceEeCCC
Confidence 0000113345566
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCcc-ccC---HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCcc
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGA-ICP---LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLH 318 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~-~~~---l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~ 318 (514)
|.+.+++.+ ++++++|++++++||+|. .++ +++|.++|++||+++|+||+|+ ++..|... .....+.
T Consensus 171 d~~~l~~~i----~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~--~~~~~~~-- 242 (396)
T PRK02627 171 DIEALKAAI----TDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLF--AYQHYGI-- 242 (396)
T ss_pred CHHHHHHhc----CCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCcee--eehhcCC--
Confidence 777777766 356899999999999994 555 8999999999999999999999 54443211 1122332
Q ss_pred CceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy16848 319 NMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYL 395 (514)
Q Consensus 319 ~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 395 (514)
.+|++ ||||.+++ | |++++++++++.+....... +.+.+++.++++.++++.+..+. ..++++++.+++
T Consensus 243 ~pdi~--t~sK~~~~-G~rig~~~~~~~~~~~~~~~~~~~--t~~~~~~~~~aa~~~l~~~~~~~---~~~~~~~~~~~~ 314 (396)
T PRK02627 243 EPDIM--TLAKGLGG-GVPIGAVLAKEKVADVFTPGDHGS--TFGGNPLACAAALAVIEIIEEEG---LLENAAEVGEYL 314 (396)
T ss_pred CCCEE--EEcchhhC-CcccEEEEEcHHHHhccCCCCCCC--CCCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHH
Confidence 56777 89999995 6 99999999888776543333 44678999999999998775433 556666666666
Q ss_pred HHHHHhC--CC---ccccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHH
Q psy16848 396 RNELIQI--GF---PVEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKF 470 (514)
Q Consensus 396 ~~~L~~~--g~---~~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~ 470 (514)
.+.|.+. .+ ....+.+.++++.++ .+..++++.|+ ++||.+.++. .+++|++++..+++++++++
T Consensus 315 ~~~l~~~~~~~~~~~~~~~~g~~~~i~~~--~~~~~~~~~l~-~~Gv~v~~~~-------~~~lRi~~~~~~~~~~i~~~ 384 (396)
T PRK02627 315 RAKLRELLEKYPGIKEVRGLGLMIGIELD--RPAAEIVKKAL-EKGLLINVTG-------DNVLRLLPPLIISKEEIDEA 384 (396)
T ss_pred HHHHHHHHHhCCCeeeeccCcEEEEEEec--CcHHHHHHHHH-HCCeEEeecC-------CCEEEEECCcccCHHHHHHH
Confidence 6666554 12 122345667788773 24678999996 7899998642 35799999888999999999
Q ss_pred HHHHHHHHHHc
Q psy16848 471 VTDLLAVWKSL 481 (514)
Q Consensus 471 ~~~l~~~l~~~ 481 (514)
+++|+++++++
T Consensus 385 ~~~l~~~l~~~ 395 (396)
T PRK02627 385 VDRLEEVLKEL 395 (396)
T ss_pred HHHHHHHHHhh
Confidence 99999988653
No 119
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.95 E-value=4.4e-26 Score=233.13 Aligned_cols=333 Identities=21% Similarity=0.228 Sum_probs=231.7
Q ss_pred cCCceeeeccc---CCCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccc
Q psy16848 15 KSNRVTCRLSS---VQYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAND 89 (514)
Q Consensus 15 ~~g~~~~d~~~---~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~ 89 (514)
.+|+.++||.+ ++|++ +|.+.+++.+++.++... ... ...+...++++++++++|.+++++++||++|+.
T Consensus 24 ~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~---~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~ 98 (379)
T TIGR00707 24 VNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHV--SNL---YYTEPQEELAEKLVEHSGADRVFFCNSGAEANE 98 (379)
T ss_pred CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccc--ccc---cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHH
Confidence 47889999987 67887 589999999999986432 111 135778999999999999999999999999999
Q ss_pred cchhhccc-cC----CCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCcc
Q psy16848 90 STLFTLGK-MI----PGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAIC 164 (514)
Q Consensus 90 ~~l~~l~~-~~----~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (514)
.++..+.. .. ++|.|++.++.|+.........+.......
T Consensus 99 ~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~----------------------------------- 143 (379)
T TIGR00707 99 AALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQK----------------------------------- 143 (379)
T ss_pred HHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhc-----------------------------------
Confidence 98876532 11 268877766655433222221111110000
Q ss_pred chhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCC
Q psy16848 165 PLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHND 244 (514)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d 244 (514)
...........++.+|
T Consensus 144 ----------------------------------------------------------------~~~~~~~~~~~~~~~d 159 (379)
T TIGR00707 144 ----------------------------------------------------------------GFEPLVPGFSYAPYND 159 (379)
T ss_pred ----------------------------------------------------------------cCCCCCCCceeeCCCC
Confidence 0000011233445557
Q ss_pred hhHHHHHHhhccCCCceEEEEecCCCCCccc-cC---HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccC
Q psy16848 245 VNHLTQVLENMDVKIPKLVAFETVHSMTGAI-CP---LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHN 319 (514)
Q Consensus 245 ~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~-~~---l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~ 319 (514)
.+.+++.+. ++++++++++++|++|.. ++ +++|.++|+++|+++|+||+|+ ++..+. +.. ....+. .
T Consensus 160 ~~~l~~~~~----~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~-~~~-~~~~~~--~ 231 (379)
T TIGR00707 160 IESLKKAID----DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGK-FFA-YEHYGI--E 231 (379)
T ss_pred HHHHHHHhh----hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch-hhh-HHhcCC--C
Confidence 777776664 357899999888888875 34 8999999999999999999998 433322 101 112222 4
Q ss_pred ceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q psy16848 320 MDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLR 396 (514)
Q Consensus 320 ~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 396 (514)
+|++ +|||.+++ | |++++++++++.+....... ..+.+++.++++.++|+.+... +.++++++++++++
T Consensus 232 ~d~~--t~sK~~~~-G~riG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~aa~aaL~~~~~~---~~~~~~~~~~~~~~ 303 (379)
T TIGR00707 232 PDII--TLAKGLGG-GVPIGATLAKEEVAEAFTPGDHGS--TFGGNPLACAAALAVLEVIEKE---RLLENVKEKGDYFK 303 (379)
T ss_pred CCEE--EEcccccC-CcccEEEEEcHHHHhhhcCCCCCC--CCCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHH
Confidence 5766 79999984 5 99999999998887644333 3357889999999999876432 46777888888888
Q ss_pred HHHHhCC----CccccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHH
Q psy16848 397 NELIQIG----FPVEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVT 472 (514)
Q Consensus 397 ~~L~~~g----~~~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~ 472 (514)
+.|++.+ +....+.+.++++.+++. ..++.+.|. ++||.+.+. +.+++|++++..+++++++++++
T Consensus 304 ~~l~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~l~-~~Gv~v~~~-------~~~~lRi~~~~~~t~~~i~~~~~ 373 (379)
T TIGR00707 304 ERLEELGKNYPNKEVRGKGLMLGIELEAP--CKDIVKKAL-EKGLLVNCA-------GPKVLRFLPPLIITKEEIDEAVS 373 (379)
T ss_pred HHHHHHHhhCCCCccccCceEEEEEecCc--HHHHHHHHH-HCCcEEeeC-------CCCEEEEECCCcCCHHHHHHHHH
Confidence 8877652 222234566778877643 578888885 999999863 23689999988899999999999
Q ss_pred HHHHH
Q psy16848 473 DLLAV 477 (514)
Q Consensus 473 ~l~~~ 477 (514)
+|+++
T Consensus 374 ~l~~~ 378 (379)
T TIGR00707 374 ALEEA 378 (379)
T ss_pred HHHHh
Confidence 99875
No 120
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.95 E-value=4.6e-26 Score=233.02 Aligned_cols=344 Identities=21% Similarity=0.183 Sum_probs=233.6
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC-CCcEEEEeccccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ-KEAGLVFTSCYVAND 89 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~i~~~sGt~a~~ 89 (514)
+|++|+||.+. ..+| ||++.+++.+++++.... + . .+ ..+...++.+++.+... .++++|++||++|++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~-~-~-~~--~~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e 112 (408)
T PRK04612 38 QGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHT-S-N-VF--YSAPPLKLAEELVTASRFAEKVFLCNSGTEANE 112 (408)
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccc-c-c-cc--CCHHHHHHHHHHHhhCCCCCEEEEcCchHHHHH
Confidence 66777777432 2223 899999999999974322 1 1 11 23567788888888763 467888999999999
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHH-hc-ccCCCcEEEeeccccccCCccchh
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLE-NM-DVKIPKLVAFETVHSMTGAICPLK 167 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 167 (514)
.|++..... -. +. ..++++++.++++||....
T Consensus 113 ~AlklAr~~-----------------------------------------~~~~g~~~~r~~ii~~~~~yHG~t~----- 146 (408)
T PRK04612 113 AAIKLVRKW-----------------------------------------ASSQGRPADKRVIVTFRGSFHGRTL----- 146 (408)
T ss_pred HHHHHHHHH-----------------------------------------HHhhCCCCCCcEEEEECCCcCCccH-----
Confidence 999654320 00 00 1235567888888862100
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH 247 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~ 247 (514)
|.....+ .+ .+...+......+..++.+|.+.
T Consensus 147 ---------------------~~~s~~~---------------------~~------~~~~~~~~~~~~~~~~~~~d~~~ 178 (408)
T PRK04612 147 ---------------------AAVTATA---------------------QP------KYQEGYEPLPGGFRYVDFNDVEA 178 (408)
T ss_pred ---------------------HHHHhcC---------------------Cc------ccccCCCCCCCCceEcCCCCHHH
Confidence 0000000 00 00000000011245567778888
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCceE
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMDI 322 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~di 322 (514)
+++.++ ..+++++++++.+...|...+ +++|+++|++||+++|+||+|+ +|..|. .+. .......+|+
T Consensus 179 l~~~~~---~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~---~~a-~~~~~~~pdi 251 (408)
T PRK04612 179 LEAAMA---GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGT---LFA-HWQEQVTPDI 251 (408)
T ss_pred HHHhhC---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc---hhh-hhhcCCCCCE
Confidence 888774 245788899988776666654 8999999999999999999998 444332 121 1111236788
Q ss_pred EEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy16848 323 ISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNEL 399 (514)
Q Consensus 323 ~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 399 (514)
. ||+|++++ | |++++++++.+.+....... +.+.+++.++++.++|+.+.++. +.++++++.+++.+.|
T Consensus 252 ~--t~~K~l~~-G~piga~~~~~~~~~~~~~~~~~~--t~~~~p~~~aaa~a~L~~~~~~~---l~~~~~~~g~~l~~~l 323 (408)
T PRK04612 252 V--TLAKALGG-GFPIGAMLAGPKVAETMQFGAHGT--TFGGNPLAAAVARVALRKLASPQ---IAANVARQSAALRAGL 323 (408)
T ss_pred E--EEcchhcC-CCceEEEEECHHHHhhhcCCCcCC--CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHH
Confidence 7 99999986 5 88888888888776544333 44688999999999999886544 7888899999999888
Q ss_pred HhC--CCcc---ccCCCcEEEEEeCC--CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHH
Q psy16848 400 IQI--GFPV---EHTPSHIIPIKIGN--PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVT 472 (514)
Q Consensus 400 ~~~--g~~~---~~~~~~~~~i~l~~--~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~ 472 (514)
+++ .+++ +...|.++.+.+.. .....++++.++ ++|+.+.+ .+.+.+|+.++..++++|++++++
T Consensus 324 ~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~-~~Gvlv~~-------~g~~~lRl~Ppl~it~eeid~~l~ 395 (408)
T PRK04612 324 EALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAA-EHGLLLLQ-------AGPDVLRFVPALNLTDAELADGLA 395 (408)
T ss_pred HHHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHH-HCCeEEee-------CCCCEEEEcCCccCCHHHHHHHHH
Confidence 876 2332 34567788888753 233567888885 99999863 234789999999999999999999
Q ss_pred HHHHHHHHc
Q psy16848 473 DLLAVWKSL 481 (514)
Q Consensus 473 ~l~~~l~~~ 481 (514)
++++++.++
T Consensus 396 ~l~~~l~~~ 404 (408)
T PRK04612 396 RLRLALADY 404 (408)
T ss_pred HHHHHHHHH
Confidence 999998765
No 121
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.95 E-value=3.5e-26 Score=235.94 Aligned_cols=221 Identities=22% Similarity=0.286 Sum_probs=161.5
Q ss_pred CChhHHHHHHhhcc--CCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCC
Q psy16848 243 NDVNHLTQVLENMD--VKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDG 315 (514)
Q Consensus 243 ~d~~~l~~~l~~~~--~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~ 315 (514)
+|++.+++.+++.. .+++++|+++++++..|...+ +++|+++|++||+++|+||+++ +|..|... ..+..+
T Consensus 180 ~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~--~~~~~~ 257 (425)
T PRK09264 180 DTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF--SFERAG 257 (425)
T ss_pred hHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH--HHhhcC
Confidence 46777888886542 246899999999999897654 8999999999999999999998 54443211 112333
Q ss_pred CccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH-HHhhhchHHHHHHHHHHH
Q psy16848 316 QLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI-RILSSQEGVELRAKHQDI 391 (514)
Q Consensus 316 ~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l-~~~~~~~~~~~~~~~~~~ 391 (514)
+ .+|++ +++|.+++.| |++++++++ ..+....... +.+.+++.++++.+++ +.+.++ ++.++++++
T Consensus 258 v--~PDi~--t~~K~l~~~G~pigav~~~~~i-~~~~~~~~~~--T~~gnp~~~aaa~a~l~~~~~~~---~l~~~~~~~ 327 (425)
T PRK09264 258 I--TPDIV--TLSKSISGYGLPMALVLIKPEL-DVWKPGEHNG--TFRGNNLAFVTATAALEEYWSDD---AFEKEVKAK 327 (425)
T ss_pred C--CCCEE--EeccccCCCccceEEEEEchhh-hccCCCccCC--CCCCCHHHHHHHHHHHHHHHhhh---HHHHHHHHH
Confidence 3 78988 8899998755 888888776 3333222222 4467888888888998 444332 367778888
Q ss_pred HHHHHHHHHhC--CCcc----ccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHH
Q psy16848 392 VAYLRNELIQI--GFPV----EHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTRE 465 (514)
Q Consensus 392 ~~~l~~~L~~~--g~~~----~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e 465 (514)
.+++.+.|+++ ..+. +...+.++++.+++......+.+.++ ++||.+.+... ....+|++++..+|++
T Consensus 328 g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~-~~Gv~~~~~~~-----~~~~lr~~p~l~~t~~ 401 (425)
T PRK09264 328 GELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGELAGKIAAEAF-ENGLIIETSGP-----EDEVVKLLPPLTIDEE 401 (425)
T ss_pred HHHHHHHHHHHHHhCCCceecceecccEEEEEecChHHHHHHHHHHH-HCCCEEeccCC-----CCCEEEEeCCCCCCHH
Confidence 88888877664 2321 23356688888876555678888886 89999975321 2468999999999999
Q ss_pred HHHHHHHHHHHHHHHc
Q psy16848 466 MIDKFVTDLLAVWKSL 481 (514)
Q Consensus 466 ~id~~~~~l~~~l~~~ 481 (514)
++++++++|+++++++
T Consensus 402 ei~~~~~~l~~~l~~~ 417 (425)
T PRK09264 402 ELEEGLDILEEAVAEV 417 (425)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998775
No 122
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.95 E-value=1.9e-26 Score=229.67 Aligned_cols=359 Identities=19% Similarity=0.203 Sum_probs=244.0
Q ss_pred CCceeeecccCCCC-------------CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC---CCcEE
Q psy16848 16 SNRVTCRLSSVQYK-------------VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ---KEAGL 79 (514)
Q Consensus 16 ~g~~~~d~~~~~~~-------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~i 79 (514)
+|.+++|..++.|+ +||++.+++.+|+++..+.... ..+.+...+|.++|+++.. .++++
T Consensus 34 eG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~----~~t~~Pa~~LA~~L~~~aP~~~l~~vF 109 (449)
T COG0161 34 EGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFG----GFTHEPAIELAEKLAELAPEGGLDHVF 109 (449)
T ss_pred ceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhc----ccCCchHHHHHHHHHHhCCCCCccEEE
Confidence 55555555555555 3799999999999986654221 1223448999999999986 67889
Q ss_pred EEeccccccccchhhccc----cC-C--CceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEE
Q psy16848 80 VFTSCYVANDSTLFTLGK----MI-P--GLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVA 152 (514)
Q Consensus 80 ~~~sGt~a~~~~l~~l~~----~~-~--gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 152 (514)
|++||++|++.+++.... .+ | ...|-....+|..++.+++.+|..-
T Consensus 110 f~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~--------------------------- 162 (449)
T COG0161 110 FTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVA--------------------------- 162 (449)
T ss_pred EeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchh---------------------------
Confidence 999999999999976543 00 1 1123333344444444433333210
Q ss_pred eeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHH-HHHhhccCC--ceeeecchHHH
Q psy16848 153 FETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMD-IISGTLVNP--EVAIHASMIQG 229 (514)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~-~~~~~l~~~--~v~~~~~~~~~ 229 (514)
.. .....++.. .++.|..|...
T Consensus 163 -------------------------------------------------------~~~~~~~~ll~~~~~~~~P~~y~~~ 187 (449)
T COG0161 163 -------------------------------------------------------LRHAFYDPLLPEVLHLPAPYAYRRG 187 (449)
T ss_pred -------------------------------------------------------hhhhhccccccCceecCCCcccccC
Confidence 00 000001000 11111111000
Q ss_pred HhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCC-CccccC----HHHHHHHHHHcCCEEEEecccc-cccc
Q psy16848 230 IRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSM-TGAICP----LKELCEVSHQHGALTFVDEVHA-VGLY 303 (514)
Q Consensus 230 ~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~np-tG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~ 303 (514)
..+.....+ ....+.+++.+.+...++++++++|++..- +|..+| +++++++|++||+++|.||+-+ +|++
T Consensus 188 --~~~~~~~~~-~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRT 264 (449)
T COG0161 188 --FFGEGDEEF-AEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRT 264 (449)
T ss_pred --CCCCChHHH-HHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcC
Confidence 000000000 123577888888877788999999998877 888877 8999999999999999999999 7777
Q ss_pred CCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHHHHHHHhh-cCc--eEeccCCcHHHHHHHHHHHHHh
Q psy16848 304 GEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNFIDTIRSY-AAG--FIFTTSLPPTVLAGAREAIRIL 376 (514)
Q Consensus 304 g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~~~l~~~-~~~--~~~~~~~~~~~~~a~~~~l~~~ 376 (514)
|+.. ..+..++ .||++ +++|.+++ | |.+++++++.+.+... ... .+++++.+|+.|+++++.|+.+
T Consensus 265 G~~F--A~e~~gi--~PDi~--~~aKGLT~-GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~ 337 (449)
T COG0161 265 GKMF--ACEHAGI--VPDIL--CLAKGLTG-GYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDIL 337 (449)
T ss_pred chhh--hhhhcCC--CCCee--eecccccc-cchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHH
Confidence 6543 2345555 89999 99999976 4 7778888888888764 222 2346689999999999999999
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHh-C-CCccc---cCCCcEEEEEeCCCcc---------HHHHHHHHHHhCCeEEecc
Q psy16848 377 SSQEGVELRAKHQDIVAYLRNELIQ-I-GFPVE---HTPSHIIPIKIGNPAL---------NTKICDMLLKEKGHYVQPI 442 (514)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~---~~~~~~~~i~l~~~~~---------~~~~~~~Ll~~~GI~v~~~ 442 (514)
+++. +.++.++...++.+.|++ + +.+.+ ...|.+..+++..... ...+.+.++ ++|+.++|.
T Consensus 338 e~e~---l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~-e~Gl~iRp~ 413 (449)
T COG0161 338 EEED---LLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAAL-ERGLLIRPL 413 (449)
T ss_pred HhcC---HHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHH-HCCeEEeec
Confidence 8777 788888999999999987 3 33333 3456676777643322 456777775 999999964
Q ss_pred cCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 443 NYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 443 ~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
.+.+-++++...|++|++++++++++.+++..
T Consensus 414 --------g~~i~~~PPliit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 414 --------GDVIYLMPPLIITREEIDELVDALREALDETL 445 (449)
T ss_pred --------CCEEEEcCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 23788999999999999999999999998753
No 123
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.95 E-value=8.5e-26 Score=233.24 Aligned_cols=366 Identities=16% Similarity=0.105 Sum_probs=231.8
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|++|+||.+. ..++ ||++.+++.+++++...... . ....+...++.+++++++. .++++|++||++|+
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~---~-~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~ 119 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPA---F-QMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESV 119 (442)
T ss_pred CCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCccc---C-CcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHH
Confidence 56666666432 2223 89999999999997543221 1 1124667889999999873 56789999999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccch
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICPL 166 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~ 166 (514)
+.|++...... . .+...+|+++|.+++.||.. |.+.
T Consensus 120 e~AlklAr~~~---------------------------------------~-~~g~~~r~~ii~~~~~yHG~t~gals-- 157 (442)
T PRK13360 120 DTALKIALAYH---------------------------------------R-ARGEGSRTRLIGRERGYHGVGFGGIS-- 157 (442)
T ss_pred HHHHHHHHHHH---------------------------------------H-hcCCCCCcEEEEEcCCcCCccHhhhh--
Confidence 99996543200 0 00112356778888888621 1110
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchH-HHHhhCCCCEEEecCCCh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMI-QGIRNSSAPKIIYRHNDV 245 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~-~~~~~~g~~~~~v~~~d~ 245 (514)
-.+.. ........+.....-+|..+. .... .+...........
T Consensus 158 --------------------------~tg~~---------~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~ 201 (442)
T PRK13360 158 --------------------------VGGIV---------PNRKAFGALLPGVDHLPHTLDLARNA-FSKGQPEHGAELA 201 (442)
T ss_pred --------------------------ccCCh---------hhhhccCCCCCCCEEeCCCchhhccc-cCCChHHHHHHHH
Confidence 00000 000000000000000111100 0000 0000000000123
Q ss_pred hHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCc
Q psy16848 246 NHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNM 320 (514)
Q Consensus 246 ~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~ 320 (514)
+.+++.++....+++++|++++++...|...+ +++|+++|++||+++|+||+++ +|..|+.+ ..+..++ .+
T Consensus 202 ~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~--a~~~~gv--~P 277 (442)
T PRK13360 202 DELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPF--AAQYFGV--TP 277 (442)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch--hhhhcCC--CC
Confidence 56667776544467899999999999999988 9999999999999999999996 66665432 2344554 78
Q ss_pred eEEEcCCcccccCC---CeEEEecHHHHHHHHhhcC-----ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHH
Q psy16848 321 DIISGTLGKAFGNI---GGYIVGTKNFIDTIRSYAA-----GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIV 392 (514)
Q Consensus 321 di~~~S~sK~lg~~---GG~l~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 392 (514)
|++ +++|++++. -|.+++++++.+.+..... ...++++.+++.++++.++|+.+.++. +.++.+++.
T Consensus 278 Div--t~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~---l~~~~~~~g 352 (442)
T PRK13360 278 DLL--TCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREG---LLTRAARLA 352 (442)
T ss_pred cee--eeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHH
Confidence 998 999999752 2667888888887653211 122355789999999999999886655 778888889
Q ss_pred HHHHHHHHhC-CCccc---cCCCcEEEEEeCC-----CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCC
Q psy16848 393 AYLRNELIQI-GFPVE---HTPSHIIPIKIGN-----PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHT 463 (514)
Q Consensus 393 ~~l~~~L~~~-g~~~~---~~~~~~~~i~l~~-----~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t 463 (514)
+++.+.|+++ ..+.+ ...|.+..+.+.. .....++.+.++ ++||++.+. .+.+|++++..+|
T Consensus 353 ~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~-~~Gvl~~~~--------~~~lr~~Ppl~~t 423 (442)
T PRK13360 353 PYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCF-EKGLMIRYT--------GDILALSPPLIIE 423 (442)
T ss_pred HHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHH-HCCcEEEec--------CCEEEEeCCCccC
Confidence 9999888876 23222 2344455555532 123457778886 899998631 2479999999999
Q ss_pred HHHHHHHHHHHHHHHHHc
Q psy16848 464 REMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 464 ~e~id~~~~~l~~~l~~~ 481 (514)
++|+|+++++|+++++++
T Consensus 424 ~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 424 EAQIDELFDILAQALKET 441 (442)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998764
No 124
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=9e-26 Score=233.49 Aligned_cols=207 Identities=22% Similarity=0.346 Sum_probs=158.9
Q ss_pred CCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCceEEEcCCcccc
Q psy16848 257 VKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 257 ~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l 331 (514)
.+++++|+++++++..|...+ +++|+++|++||+++|+||+++ +|..|..+ ..+..++ .+|++ +++|++
T Consensus 205 ~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~--a~~~~gv--~pDi~--t~gK~l 278 (445)
T PRK08593 205 ADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS--SISHFNI--TPDLM--SFGKSL 278 (445)
T ss_pred CCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH--HHHhcCC--CCCEe--eecccc
Confidence 357899999999999999866 9999999999999999999997 65554321 1234444 78988 999999
Q ss_pred cC--CCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--CCcc-
Q psy16848 332 GN--IGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI--GFPV- 406 (514)
Q Consensus 332 g~--~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~- 406 (514)
++ +.|++++++++.+.+.... ..++++.++..++++.++|+.+.++. +.++.+++.+++++.|+++ ..++
T Consensus 279 ~~G~p~gav~~~~~i~~~~~~~~--~~~T~~~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v 353 (445)
T PRK08593 279 AGGMPMSAIVGRKEIMESLEAPA--HLFTTGANPVSCAAALATIDMIEDES---LLQRSAEKGEYARKRFDQWVSKYNFV 353 (445)
T ss_pred cCCcccEEEEEcHHHHhhhccCC--CCCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 75 2388999999988875332 33366889999999999999886554 7788888888888888765 2332
Q ss_pred --ccCCCcEEEEEeCC--------CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 407 --EHTPSHIIPIKIGN--------PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 407 --~~~~~~~~~i~l~~--------~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
+...|.++.+.+.. ......+...++ ++||.+.+. +.+.+|+.++..+|++|++++++++++
T Consensus 354 ~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~-------~~~~lr~~p~l~~t~~~id~~~~~l~~ 425 (445)
T PRK08593 354 GDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCF-EHGVVIIAV-------AGNVLRFQPPLVITYEQLDTALNTIEQ 425 (445)
T ss_pred EEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHH-HCCeEEecc-------CCCEEEEECCCccCHHHHHHHHHHHHH
Confidence 23456676666632 112456888886 899998642 235899999999999999999999999
Q ss_pred HHHHcC
Q psy16848 477 VWKSLD 482 (514)
Q Consensus 477 ~l~~~~ 482 (514)
+++++.
T Consensus 426 ~l~~~~ 431 (445)
T PRK08593 426 AFTALE 431 (445)
T ss_pred HHHHHh
Confidence 998764
No 125
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=8.7e-26 Score=231.84 Aligned_cols=338 Identities=16% Similarity=0.121 Sum_probs=228.5
Q ss_pred CCceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----C--cEEEEecc-cc
Q psy16848 16 SNRVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----E--AGLVFTSC-YV 86 (514)
Q Consensus 16 ~g~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~--~~i~~~sG-t~ 86 (514)
+|..++|+..+. +..++.+.+++.+.+.. ...+....|..++.+++.+.+.+.+|. + ..+++++| ++
T Consensus 26 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~----~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~ 101 (393)
T TIGR03538 26 ASKPPIALSIGEPKHPTPAFVLEALRENLHG----LSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTRE 101 (393)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHhhc----cCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHH
Confidence 567788886433 33456788887776542 122223345566666666666665432 2 34666665 45
Q ss_pred ccccchhhccccCCCce--EEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCcc
Q psy16848 87 ANDSTLFTLGKMIPGLH--YISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAIC 164 (514)
Q Consensus 87 a~~~~l~~l~~~~~gd~--v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (514)
++..++.+++. |||. |+++.+.|......++..|.+++.++..+-
T Consensus 102 al~~~~~~l~~--~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~------------------------------- 148 (393)
T TIGR03538 102 ALFAFAQAVIN--PGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAE------------------------------- 148 (393)
T ss_pred HHHHHHHHHcC--CCCcceEEecCCCCcchHHHHHhcCCeEEEeecccc-------------------------------
Confidence 67777777766 8986 999999987776666666666554432100
Q ss_pred chhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCC
Q psy16848 165 PLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHND 244 (514)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d 244 (514)
++. ..|
T Consensus 149 -----------------------------~~~---------------------------------------------~~d 154 (393)
T TIGR03538 149 -----------------------------NGF---------------------------------------------LPD 154 (393)
T ss_pred -----------------------------CCC---------------------------------------------CCC
Confidence 000 013
Q ss_pred hhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC--CCCCcccc---CCC
Q psy16848 245 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE--HGAGIGER---DGQ 316 (514)
Q Consensus 245 ~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~--~~~~~~~~---~~~ 316 (514)
.+.+++.+. ++++++++++||||||.+++ +++|.++|++|++++|+||+|....... ...+.... .+.
T Consensus 155 ~~~l~~~~~----~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 230 (393)
T TIGR03538 155 FDAVPESVW----RRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGR 230 (393)
T ss_pred HHHHHHHHh----hcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccc
Confidence 344444443 35789999999999999999 7999999999999999999998443321 11111100 110
Q ss_pred -ccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHH
Q psy16848 317 -LHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIV 392 (514)
Q Consensus 317 -~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 392 (514)
..+..+++.||||.++.+| ||+++++++++.+....... +.+.+.+.+.++.+.+. ....+.+.++.+++++
T Consensus 231 ~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~~~~~~~--~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~ 306 (393)
T TIGR03538 231 DDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYH--GCAMPIPTQLASIAAWN--DEQHVRENRALYREKF 306 (393)
T ss_pred cccccEEEEecchhhcCCcccceEEEecCHHHHHHHHHHHHhh--ccCcCHHHHHHHHHHhc--ChHHHHHHHHHHHHHH
Confidence 1246799999999988778 99999999998887655433 33567777777777664 2356777888899999
Q ss_pred HHHHHHHHhCCCccccC-CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCC-----CCCCcEEEEEeCCCCCHHH
Q psy16848 393 AYLRNELIQIGFPVEHT-PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTV-----PVGEEKIRLAPTPFHTREM 466 (514)
Q Consensus 393 ~~l~~~L~~~g~~~~~~-~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~-----~~~~~~iRl~~~~~~t~e~ 466 (514)
+.+.+.|++. +.+..+ .+.++++.++ .+..++++.+++++||.+.|+..+.. ..+.+++|++++. ++++
T Consensus 307 ~~~~~~L~~~-~~~~~p~gg~f~~~~~~--~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~~~~ 381 (393)
T TIGR03538 307 AAVLEILGQV-LDLELPDAGFYLWPKVP--GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--PLEE 381 (393)
T ss_pred HHHHHHHHhh-CcccCCCeeEEEEEECC--CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--CHHH
Confidence 9999999875 444344 4457778887 23678888887678999999996532 2346799999983 6899
Q ss_pred HHHHHHHHHHH
Q psy16848 467 IDKFVTDLLAV 477 (514)
Q Consensus 467 id~~~~~l~~~ 477 (514)
+++++++|+++
T Consensus 382 l~~~l~~l~~~ 392 (393)
T TIGR03538 382 CVEAAERIRSF 392 (393)
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 126
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.95 E-value=1.6e-25 Score=227.52 Aligned_cols=322 Identities=20% Similarity=0.165 Sum_probs=224.5
Q ss_pred CCceeeecccCCCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----CcEEEEeccccc-c
Q psy16848 16 SNRVTCRLSSVQYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EAGLVFTSCYVA-N 88 (514)
Q Consensus 16 ~g~~~~d~~~~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~i~~~sGt~a-~ 88 (514)
.+..++|+..++... +|.+.+++.+..... ++....|..++.+.+++++.+..|. +..+++++|++. +
T Consensus 25 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~-----~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i 99 (364)
T PRK07865 25 HPDGIVDLSVGTPVDPVPPVIQEALAAAADAP-----GYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELV 99 (364)
T ss_pred cCCCEEEcCCCCCCCCCCHHHHHHHHHHHhhC-----CCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHH
Confidence 445689997665332 466777776654321 2223345567777777777766553 245777777665 4
Q ss_pred ccchhhc-cccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchh
Q psy16848 89 DSTLFTL-GKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK 167 (514)
Q Consensus 89 ~~~l~~l-~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (514)
..++..+ ++ +||.|+++.++|.....+++..|++++.++. .+
T Consensus 100 ~~~~~~l~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~--------------------------------- 142 (364)
T PRK07865 100 AWLPTLLGLG--PGDVVVIPELAYPTYEVGARLAGATVVRADS--LT--------------------------------- 142 (364)
T ss_pred HHHHHHHcCC--CCCEEEECCCCcccHHHHHHhcCCEEEecCC--hh---------------------------------
Confidence 4444444 34 9999999999999888777777776654421 00
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH 247 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~ 247 (514)
T Consensus 143 -------------------------------------------------------------------------------- 142 (364)
T PRK07865 143 -------------------------------------------------------------------------------- 142 (364)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccC--CCccCceE
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERD--GQLHNMDI 322 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~--~~~~~~di 322 (514)
.+. .++++++++++++||||.+++ +++|.++|+++|+++|+||+|..........+..... +...+..+
T Consensus 143 ---~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i 216 (364)
T PRK07865 143 ---ELG---PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLL 216 (364)
T ss_pred ---hCC---cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEE
Confidence 011 134789999999999999999 6888999999999999999999433221111111110 11224679
Q ss_pred EEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy16848 323 ISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNEL 399 (514)
Q Consensus 323 ~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 399 (514)
+++||||.++.+| ||+++++++++.+....... +...+.+.+.++.++++. ..+.++.++.++++++.+.+.|
T Consensus 217 ~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L 292 (364)
T PRK07865 217 AVHSLSKQSNLAGYRAGFVAGDPALVAELLEVRKHA--GMMVPAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPAL 292 (364)
T ss_pred EEeechhccCCCceeeEEEecCHHHHHHHHHHHHhc--CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998767 99999999999887655443 235677777777777753 3456678888899999999999
Q ss_pred HhCCCccccCCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q psy16848 400 IQIGFPVEHTPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLL 475 (514)
Q Consensus 400 ~~~g~~~~~~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~ 475 (514)
++.|+.+..+.++ ++++.++ .+..++.+.| .++||.+.++..+. +...+++|++++. +++++++++++|+
T Consensus 293 ~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~l-~~~gv~v~pg~~f~-~~~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 293 EAAGFRVDHSEAGLYLWATRG--EDCWDTVAWL-AERGILVAPGDFYG-PAGAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred HHcCCcccCCCccEEEEEeCC--CCHHHHHHHH-HHCCEEEeCccccC-cCCCCEEEEEecC--CHHHHHHHHHHhh
Confidence 9988877666666 4556553 2356788888 49999999988643 3346799999983 6899999998875
No 127
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.95 E-value=1.1e-25 Score=231.66 Aligned_cols=339 Identities=13% Similarity=0.122 Sum_probs=231.2
Q ss_pred CCceeeecccCC------CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC--------CcEEEE
Q psy16848 16 SNRVTCRLSSVQ------YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK--------EAGLVF 81 (514)
Q Consensus 16 ~g~~~~d~~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--------~~~i~~ 81 (514)
.|..++|+...+ +..++++.+++.+.+..... .. ++......++++.++++++. ++.+++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~--~~----Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t 102 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKF--NG----YAPSVGALAAREAVAEYLSSDLPGKLTADDVVLT 102 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCC--CC----CCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEe
Confidence 567889996543 44578888888887764211 11 11222345566677777653 345666
Q ss_pred eccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccC
Q psy16848 82 TSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTG 161 (514)
Q Consensus 82 ~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 161 (514)
+++|+|+..++.++.. +||.|+++.++|......++..|.+++.++....+
T Consensus 103 ~G~t~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~--------------------------- 153 (403)
T TIGR01265 103 SGCSQAIEICIEALAN--PGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEK--------------------------- 153 (403)
T ss_pred cChHHHHHHHHHHhCC--CCCEEEEeCCCchhHHHHHHHcCCEEEEecCCccc---------------------------
Confidence 6678888888888865 99999999999887665555555554433210000
Q ss_pred CccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec
Q psy16848 162 AICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR 241 (514)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~ 241 (514)
+.
T Consensus 154 ---------------------------------~~--------------------------------------------- 155 (403)
T TIGR01265 154 ---------------------------------DW--------------------------------------------- 155 (403)
T ss_pred ---------------------------------CC---------------------------------------------
Confidence 00
Q ss_pred CCChhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC-CCCCccccCCCc
Q psy16848 242 HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE-HGAGIGERDGQL 317 (514)
Q Consensus 242 ~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~-~~~~~~~~~~~~ 317 (514)
..|.+.+++.+ .++++++++++|+||||.+++ +++|.++|+++|+++|+|++|.....+. ...++.....
T Consensus 156 ~~d~~~l~~~~----~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-- 229 (403)
T TIGR01265 156 EIDLDGLEALA----DEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFAS-- 229 (403)
T ss_pred ccCHHHHHHHh----CcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhcc--
Confidence 01333443333 446789999999999999998 7999999999999999999999443322 2112222221
Q ss_pred cCceEEEcCCcccccCCC---eEEEec-H-H-----HHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHH
Q psy16848 318 HNMDIISGTLGKAFGNIG---GYIVGT-K-N-----FIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAK 387 (514)
Q Consensus 318 ~~~di~~~S~sK~lg~~G---G~l~~~-~-~-----~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 387 (514)
....++++||||.++.+| ||++++ + + +++.+...... ....+.+.+.++.++++......+++.++.
T Consensus 230 ~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 306 (403)
T TIGR01265 230 IVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQR---ILGPATIVQGALPDILENTPQEFFDGKISV 306 (403)
T ss_pred CCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhhh---hcCCChHHHHHHHHHHHhChHHHHHHHHHH
Confidence 235799999999988778 999874 2 2 34444333211 224577888888888864334567778888
Q ss_pred HHHHHHHHHHHHHhC-CCccccC-CCcEEEEEeCCC-----ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCC
Q psy16848 388 HQDIVAYLRNELIQI-GFPVEHT-PSHIIPIKIGNP-----ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTP 460 (514)
Q Consensus 388 ~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~i~l~~~-----~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~ 460 (514)
++++++.+.+.|+.. ++.+..+ .+.+++++++.. .+..++++.+++++||.+.|+..+. .++++|++++
T Consensus 307 ~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~---~~~~iRis~~- 382 (403)
T TIGR01265 307 LKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFG---LPNWVRITIT- 382 (403)
T ss_pred HHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccC---CCCeEEEEec-
Confidence 999999999999887 7765444 456778887643 2467888887668899999998753 2579999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHc
Q psy16848 461 FHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 461 ~~t~e~id~~~~~l~~~l~~~ 481 (514)
..++.+++++++|++++++.
T Consensus 383 -~~~~~l~~~l~~l~~~~~~~ 402 (403)
T TIGR01265 383 -VPESMLEEACSRIKEFCERH 402 (403)
T ss_pred -CCHHHHHHHHHHHHHHHHhc
Confidence 35788999999999888653
No 128
>PRK07483 hypothetical protein; Provisional
Probab=99.95 E-value=1e-25 Score=232.70 Aligned_cols=375 Identities=17% Similarity=0.139 Sum_probs=234.4
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|++|+||.+. ..++ ||+|.+++.+++++....... . -..+...++.+++++++. .++++|++||++|+
T Consensus 28 dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~--~--~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAv 103 (443)
T PRK07483 28 TGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTS--F--FTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAV 103 (443)
T ss_pred CCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCcccc--c--cCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHH
Confidence 67777777542 2223 899999999999974321111 1 124677889999999863 46789999999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccch
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICPL 166 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~ 166 (514)
+.|++..... .-.+..+++++++.+++.||-. +.+.
T Consensus 104 e~AlklAr~~----------------------------------------~~~~g~~~r~~Ii~~~~~YHG~t~~a~s-- 141 (443)
T PRK07483 104 EAALKLARQY----------------------------------------FVEIGQPQRRHFIARRQSYHGNTLGALA-- 141 (443)
T ss_pred HHHHHHHHHH----------------------------------------HHhcCCCCCcEEEEECCCcCCcCHHHhh--
Confidence 9999644320 0001124567788888888621 1110
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
..+.. ........+..+..-++.++.......+.....+.....+
T Consensus 142 --------------------------~s~~~---------~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (443)
T PRK07483 142 --------------------------IGGNA---------WRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLAD 186 (443)
T ss_pred --------------------------hcCCc---------ccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHH
Confidence 00000 0000000000000000000000000000000000000023
Q ss_pred HHHHHHhhccCCCceEEEEecCCC-CCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCc
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHS-MTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNM 320 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~n-ptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~ 320 (514)
.+++.+.+...+++++|++++++. ..|...+ +++|+++|++||+++|.||+++ +|+.|..+ ..+.+++ .|
T Consensus 187 ~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~--a~~~~gv--~P 262 (443)
T PRK07483 187 ELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLF--ACEEDGV--AP 262 (443)
T ss_pred HHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHH--HHhhcCC--CC
Confidence 445545443346789999999996 4577665 8999999999999999999999 66655322 1234454 79
Q ss_pred eEEEcCCcccccCC---CeEEEecHHHHHHHHhhcC--ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy16848 321 DIISGTLGKAFGNI---GGYIVGTKNFIDTIRSYAA--GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYL 395 (514)
Q Consensus 321 di~~~S~sK~lg~~---GG~l~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 395 (514)
|++ +++|.+++. -|.+++++++.+.+..... ..+.+++.+++.++++.++|+.+.++. +.++.+++.+++
T Consensus 263 Div--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~---l~~~~~~~g~~l 337 (443)
T PRK07483 263 DLV--TIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDG---LLANVRARGEQL 337 (443)
T ss_pred Cee--eehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHH
Confidence 999 899999761 2778889998887754321 122355789999999999999987665 778888888888
Q ss_pred HHHHHhC--CCcc---ccCCCcEEEEEeCCC-----------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeC
Q psy16848 396 RNELIQI--GFPV---EHTPSHIIPIKIGNP-----------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPT 459 (514)
Q Consensus 396 ~~~L~~~--g~~~---~~~~~~~~~i~l~~~-----------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~ 459 (514)
++.|+++ ..+. +...|.++.+++... .....+.+.++ ++|+.+.+..........+.+|+.++
T Consensus 338 ~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~~~~~~~~~~~~l~~~Pp 416 (443)
T PRK07483 338 RARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAM-ARGLMVYPMGGTIDGVRGDHVLLAPP 416 (443)
T ss_pred HHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHH-HCCcEEEecCccccCCCCCEEEEECC
Confidence 8888764 3332 244667777776321 12356778886 89999975422111112468999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHc
Q psy16848 460 PFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 460 ~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+.+|++|+|+++++|+++++++
T Consensus 417 L~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 417 FIITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999765
No 129
>PRK12403 putative aminotransferase; Provisional
Probab=99.95 E-value=1.1e-25 Score=233.61 Aligned_cols=359 Identities=16% Similarity=0.117 Sum_probs=233.9
Q ss_pred CCceeeecccC---CCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|++|+||.+. ..+ +||+|.+++.+++++++... ....+..+...+++++++++++ .++++|++||++|+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~---~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~ 128 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYN---MFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEAN 128 (460)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCee---cccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHH
Confidence 56667776332 123 38999999999999865421 2223456788999999999986 56889999999999
Q ss_pred ccchhhcccc----C-CCceEE--ecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccC
Q psy16848 89 DSTLFTLGKM----I-PGLHYI--SDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTG 161 (514)
Q Consensus 89 ~~~l~~l~~~----~-~gd~v~--~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 161 (514)
+.|++..... + ++..++ ....+|.+++.+++..+........ ...|.+
T Consensus 129 e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~--------------~~~~~~----------- 183 (460)
T PRK12403 129 EVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMG--------------GLIPDV----------- 183 (460)
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccC--------------CCCCCC-----------
Confidence 9999876421 1 333333 3455688877777666543210000 000000
Q ss_pred CccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec
Q psy16848 162 AICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR 241 (514)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~ 241 (514)
.-+|.++... .+......+
T Consensus 184 ----------------------------------------------------------~~~~~p~~~~---~~~~~~~~~ 202 (460)
T PRK12403 184 ----------------------------------------------------------AHIDEPYWYA---NGGELTPAE 202 (460)
T ss_pred ----------------------------------------------------------EEeCCCcccc---cccCCChHH
Confidence 0000000000 000000000
Q ss_pred CC--ChhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccC
Q psy16848 242 HN--DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERD 314 (514)
Q Consensus 242 ~~--d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~ 314 (514)
.+ +.+.+++.+.+...+++++|+++++++..|.+.+ +++|+++|++||+++|.||+++ +|..|+.+ ..+.+
T Consensus 203 ~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~--a~e~~ 280 (460)
T PRK12403 203 FGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWF--AHEHF 280 (460)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh--hhhhc
Confidence 01 1244555554433456899999999999999887 9999999999999999999997 66655422 12445
Q ss_pred CCccCceEEEcCCcccccCC---CeEEEecHHHHHHHHhhcCc--eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHH
Q psy16848 315 GQLHNMDIISGTLGKAFGNI---GGYIVGTKNFIDTIRSYAAG--FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQ 389 (514)
Q Consensus 315 ~~~~~~di~~~S~sK~lg~~---GG~l~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 389 (514)
++ .+|++ +++|++++. -|.+++++++.+.+...... ++.+++.+++.++++.++|+.+.++. ..++.+
T Consensus 281 gv--~PDiv--~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~---l~~~~~ 353 (460)
T PRK12403 281 GF--EPDTL--SIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEG---VVTRVK 353 (460)
T ss_pred CC--CCCeE--EEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHH
Confidence 55 78999 799999851 26667888888877532222 22355789999999999999987655 677775
Q ss_pred -HHHHHHHHHHHhC--CCcc---ccCCCcEEEEEeCCCc-----------cHHHHHHHHHHhCCeEEecccCCCCCCCCc
Q psy16848 390 -DIVAYLRNELIQI--GFPV---EHTPSHIIPIKIGNPA-----------LNTKICDMLLKEKGHYVQPINYPTVPVGEE 452 (514)
Q Consensus 390 -~~~~~l~~~L~~~--g~~~---~~~~~~~~~i~l~~~~-----------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~ 452 (514)
++.+++++.|+++ ..++ +...|.++.+++.... ....+...++ ++|+.+.+. .+
T Consensus 354 ~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~--------~~ 424 (460)
T PRK12403 354 DDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGF-EEGVIIRST--------LG 424 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHH-hCCEEEEec--------CC
Confidence 7788888877654 3332 3446778777774210 0123445565 899998631 13
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 453 KIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 453 ~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
.+|++++...|++|+++++++++++++++
T Consensus 425 ~~~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 425 RMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999875
No 130
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=8.5e-26 Score=234.13 Aligned_cols=207 Identities=23% Similarity=0.264 Sum_probs=160.2
Q ss_pred CCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCceEEEcCCcccc
Q psy16848 257 VKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 257 ~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l 331 (514)
.+++++|++++++...|...+ +++|+++|++||+++|.||+++ +|+.|..+ ..+.+++ .+|++ +++|.+
T Consensus 217 ~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f--a~~~~gv--~PDiv--~~gK~l 290 (443)
T PRK06058 217 ADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF--ACEHEGI--VPDLI--TTAKGI 290 (443)
T ss_pred CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh--HHHhcCC--CCCEE--EEcccc
Confidence 357899999999988888876 8999999999999999999998 55554322 1234444 78999 789999
Q ss_pred cCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--CCcc
Q psy16848 332 GNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI--GFPV 406 (514)
Q Consensus 332 g~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~ 406 (514)
++ | |++++++++.+.+....... +++.+++.++++.++|+.+.++. +.++.+++.+++.+.|+++ ..++
T Consensus 291 ~~-G~Pi~av~~~~~i~~~~~~~~~~~--T~~gnpl~~aaa~a~L~~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~ 364 (443)
T PRK06058 291 AG-GLPLSAVTGRAEIMDAPHPGGLGG--TYGGNPVACAAALAAIETIEEDD---LVARARQIEALMTDRLRALAAEDDR 364 (443)
T ss_pred cC-CCccEEEEEcHHHHhhccCCCCCC--CCCCCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 86 6 88999999888776543333 55889999999999999886555 7788888889999888775 2333
Q ss_pred ---ccCCCcEEEEEeCCC-------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 407 ---EHTPSHIIPIKIGNP-------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 407 ---~~~~~~~~~i~l~~~-------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
+...|.++.+.+... .....+.+.++ ++||.+.++.. ..+++|+.++..+|+++++++++++++
T Consensus 365 i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~~~~~~~-----~~~~lr~~Ppl~~t~~~i~~~~~~l~~ 438 (443)
T PRK06058 365 IGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAH-AAGVIVLTCGT-----YGNVIRLLPPLVIGDELLREGLDVLEA 438 (443)
T ss_pred EEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHH-HCCeEEeccCC-----CCCEEEEECCCccCHHHHHHHHHHHHH
Confidence 355677887777321 12456777775 89999975422 135899999999999999999999999
Q ss_pred HHHHc
Q psy16848 477 VWKSL 481 (514)
Q Consensus 477 ~l~~~ 481 (514)
+++++
T Consensus 439 ~l~~~ 443 (443)
T PRK06058 439 ALADL 443 (443)
T ss_pred HHHhC
Confidence 98753
No 131
>PLN02656 tyrosine transaminase
Probab=99.95 E-value=1.7e-25 Score=230.55 Aligned_cols=344 Identities=12% Similarity=0.109 Sum_probs=230.2
Q ss_pred cCCceeeecccCC------CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC----CCcEEEEecc
Q psy16848 15 KSNRVTCRLSSVQ------YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ----KEAGLVFTSC 84 (514)
Q Consensus 15 ~~g~~~~d~~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~~~i~~~sG 84 (514)
.+|..++++.-.+ +..++.+.+++.+.+..... .++....|..++.+++.+.+.+..| .+.+++++++
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~ 105 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKF--NGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGC 105 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCCh
Confidence 3677889996433 33467888888887775211 1122223444555555555544433 2345656666
Q ss_pred ccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCcc
Q psy16848 85 YVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAIC 164 (514)
Q Consensus 85 t~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (514)
++++..++.++.. +||.|++++++|.......+..|.+++.++....+
T Consensus 106 ~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~------------------------------ 153 (409)
T PLN02656 106 TQAIDVALSMLAR--PGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEK------------------------------ 153 (409)
T ss_pred HHHHHHHHHHHhC--CCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcC------------------------------
Confidence 7778778877765 99999999999977665555555555443220000
Q ss_pred chhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCC
Q psy16848 165 PLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHND 244 (514)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d 244 (514)
+. ..|
T Consensus 154 ------------------------------~~---------------------------------------------~~d 158 (409)
T PLN02656 154 ------------------------------GW---------------------------------------------EVD 158 (409)
T ss_pred ------------------------------CC---------------------------------------------CCC
Confidence 00 013
Q ss_pred hhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccC-CCCCCccccCCCccCc
Q psy16848 245 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYG-EHGAGIGERDGQLHNM 320 (514)
Q Consensus 245 ~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g-~~~~~~~~~~~~~~~~ 320 (514)
.+.+++.+ +++++++++++|+||||.+++ +++|.++|+++|+++|+||+|....+. +...++.... ...+
T Consensus 159 ~~~l~~~~----~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~ 232 (409)
T PLN02656 159 LDAVEALA----DQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFG--SIVP 232 (409)
T ss_pred HHHHHHHh----ccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhc--ccCc
Confidence 33443333 446889999999999999987 789999999999999999999943332 2211221111 1246
Q ss_pred eEEEcCCcccccCCC---eEEEec--------HHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHH
Q psy16848 321 DIISGTLGKAFGNIG---GYIVGT--------KNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQ 389 (514)
Q Consensus 321 di~~~S~sK~lg~~G---G~l~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 389 (514)
.++++||||.++.+| ||++++ +++++.+....... .+.+.+.+.++..+++...+..+++.++.++
T Consensus 233 vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~ 309 (409)
T PLN02656 233 VLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDIL---GGPATFIQAAVPTILEQTDESFFKKTINILK 309 (409)
T ss_pred EEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhhh---cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 899999999988878 999984 57777776554321 2457788888888886422346778888999
Q ss_pred HHHHHHHHHHHhC-CCc-cccCCC-cEEEEEeCCC-----ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCC
Q psy16848 390 DIVAYLRNELIQI-GFP-VEHTPS-HIIPIKIGNP-----ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPF 461 (514)
Q Consensus 390 ~~~~~l~~~L~~~-g~~-~~~~~~-~~~~i~l~~~-----~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~ 461 (514)
++++.+.+.|++. ++. +..+.+ .+++++++.. .+..+++..+++++||.+.|+..+. ..+++|++++.
T Consensus 310 ~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg---~~~~iRi~~~~- 385 (409)
T PLN02656 310 QSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVG---LKNWLRITFAA- 385 (409)
T ss_pred HHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcC---CCCeEEEEeCC-
Confidence 9999999999887 333 234544 4667777521 1244555555568999999998753 25799999993
Q ss_pred CCHHHHHHHHHHHHHHHHHc
Q psy16848 462 HTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 462 ~t~e~id~~~~~l~~~l~~~ 481 (514)
+++++++.+++|++++.+.
T Consensus 386 -~~e~l~eal~rl~~~~~~~ 404 (409)
T PLN02656 386 -DPSSLEEALGRIKSFYLRH 404 (409)
T ss_pred -CHHHHHHHHHHHHHHHHHh
Confidence 7899999999999988764
No 132
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.95 E-value=1.7e-25 Score=235.01 Aligned_cols=337 Identities=16% Similarity=0.131 Sum_probs=224.1
Q ss_pred hHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC---CcEEEEecc-ccccccchhhcc-ccCCCceEEec
Q psy16848 33 GGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK---EAGLVFTSC-YVANDSTLFTLG-KMIPGLHYISD 107 (514)
Q Consensus 33 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~---~~~i~~~sG-t~a~~~~l~~l~-~~~~gd~v~~~ 107 (514)
.+.+++.+.++..+.....+....|..++.+.+.+++.+..|. +..|++|+| ++++..++.++. . +||.|+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~--~gD~Vlv~ 169 (481)
T PTZ00377 92 DVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGD--PSDGVMIP 169 (481)
T ss_pred HHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccC--CCCEEEEC
Confidence 5666666666653322233334445566666666666554342 233555555 566777777775 4 99999999
Q ss_pred CccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccc
Q psy16848 108 AGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 108 ~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
.++|......++..|.+++.++....
T Consensus 170 ~P~y~~y~~~~~~~g~~~v~v~~~~~------------------------------------------------------ 195 (481)
T PTZ00377 170 IPQYPLYSAAITLLGGKQVPYYLDEE------------------------------------------------------ 195 (481)
T ss_pred CCCchhHHHHHHHcCCEEEEEEeccc------------------------------------------------------
Confidence 99999988888888877765542100
Q ss_pred ccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccC--CCceEEEE
Q psy16848 188 VGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDV--KIPKLVAF 265 (514)
Q Consensus 188 ~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~--~~~~~vv~ 265 (514)
++++ -|.+.+++.+.+... ++++++++
T Consensus 196 ------~~~~---------------------------------------------~d~~~l~~~l~~~~~~~~~~k~l~l 224 (481)
T PTZ00377 196 ------KGWS---------------------------------------------LDQEELEEAYEQAVRNGITPRALVV 224 (481)
T ss_pred ------cCCC---------------------------------------------CCHHHHHHHHHHHHhcCCCeeEEEE
Confidence 0000 145566666654221 26888888
Q ss_pred ecCCCCCccccC---HHHHHHHHHHcCCEEEEecccccccc-CC-CCCCcccc-CCCcc-----CceEEEcCCcccc-cC
Q psy16848 266 ETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY-GE-HGAGIGER-DGQLH-----NMDIISGTLGKAF-GN 333 (514)
Q Consensus 266 ~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~-g~-~~~~~~~~-~~~~~-----~~di~~~S~sK~l-g~ 333 (514)
++|+||||.+++ +++|+++|++|++++|+||+|....+ +. ...++... ..... ...++++||||.+ +.
T Consensus 225 ~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~ 304 (481)
T PTZ00377 225 INPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGE 304 (481)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccC
Confidence 899999999999 89999999999999999999994433 21 11121111 01111 1468899999985 65
Q ss_pred CC---eEEEe---cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHh---------hhchHHHHHHHHHHHHHHHHHH
Q psy16848 334 IG---GYIVG---TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRIL---------SSQEGVELRAKHQDIVAYLRNE 398 (514)
Q Consensus 334 ~G---G~l~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~---------~~~~~~~~~~~~~~~~~~l~~~ 398 (514)
+| ||+++ ++++++.+...... ..+.+.+.+.++..+++.. ......+.++.++++++.+.+.
T Consensus 305 ~GlRiG~~~~~~~p~~li~~l~~~~~~---~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~ 381 (481)
T PTZ00377 305 CGRRGGYFELTNIPPEVREQIYKLASI---NLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDE 381 (481)
T ss_pred CcCceEEEEEeCCCHHHHHHHHHHhhe---ecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67 99986 88999888775532 2256777888888877421 0112334445678899999999
Q ss_pred HHhC-CCccccCCCc-EEEEEeC--CCc----------cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCH
Q psy16848 399 LIQI-GFPVEHTPSH-IIPIKIG--NPA----------LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTR 464 (514)
Q Consensus 399 L~~~-g~~~~~~~~~-~~~i~l~--~~~----------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~ 464 (514)
|+++ |+.+..+.++ +++++++ ... ...+++..+++++||.+.|+..+....+.+++|++++ .++
T Consensus 382 L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~--~~~ 459 (481)
T PTZ00377 382 LNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL--PPE 459 (481)
T ss_pred HhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC--CCH
Confidence 9987 8887777765 4444442 211 1334566666789999999997654345679999998 678
Q ss_pred HHHHHHHHHHHHHHHHc
Q psy16848 465 EMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 465 e~id~~~~~l~~~l~~~ 481 (514)
+++++++++|++++++.
T Consensus 460 e~l~~~l~rl~~~~~~~ 476 (481)
T PTZ00377 460 EQIEEMVKKIKEFHESF 476 (481)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999988764
No 133
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=2.7e-25 Score=228.92 Aligned_cols=344 Identities=12% Similarity=0.099 Sum_probs=227.4
Q ss_pred cCCceeeecccCCC------CCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC----CCcEEEEecc
Q psy16848 15 KSNRVTCRLSSVQY------KVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ----KEAGLVFTSC 84 (514)
Q Consensus 15 ~~g~~~~d~~~~~~------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~~~i~~~sG 84 (514)
..+...|++.-.++ -.+|.+.+++.+.+..... ..+....|..++.+.+.+.+.+..| .+..++++++
T Consensus 29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~ 106 (409)
T PLN00143 29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKF--NSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGC 106 (409)
T ss_pred CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCC--CCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecCh
Confidence 36678899865444 3466788888888775211 1122233555666666665555433 2334544555
Q ss_pred ccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCcc
Q psy16848 85 YVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAIC 164 (514)
Q Consensus 85 t~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (514)
++++..++.++.. +||.|+++.++|......++..|.+++.++..+.+
T Consensus 107 ~~al~~~~~~l~~--~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~------------------------------ 154 (409)
T PLN00143 107 KHAAEIIIKVLAR--PEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEK------------------------------ 154 (409)
T ss_pred HHHHHHHHHHHcC--CCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCC------------------------------
Confidence 6677888888866 99999999999988877766666665544321000
Q ss_pred chhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCC
Q psy16848 165 PLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHND 244 (514)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d 244 (514)
+. .-|
T Consensus 155 ------------------------------~~---------------------------------------------~~d 159 (409)
T PLN00143 155 ------------------------------GW---------------------------------------------EVD 159 (409)
T ss_pred ------------------------------CC---------------------------------------------cCC
Confidence 00 003
Q ss_pred hhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccC-CCCCCccccCCCccCc
Q psy16848 245 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYG-EHGAGIGERDGQLHNM 320 (514)
Q Consensus 245 ~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g-~~~~~~~~~~~~~~~~ 320 (514)
++.+++. ..++++++++++||||||.+++ +++|.++|++|++++|+||+|.....+ ....++.... ....
T Consensus 160 ~~~l~~~----~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~--~~~~ 233 (409)
T PLN00143 160 LDAVEAI----ADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFA--SIVP 233 (409)
T ss_pred HHHHHHh----cccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhc--ccCc
Confidence 3444333 3345789999999999999999 788999999999999999999944332 2111111111 1246
Q ss_pred eEEEcCCcccccCCC---eEEEec-H-HHH------HHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHH
Q psy16848 321 DIISGTLGKAFGNIG---GYIVGT-K-NFI------DTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQ 389 (514)
Q Consensus 321 di~~~S~sK~lg~~G---G~l~~~-~-~~~------~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 389 (514)
.++++||||.++.+| ||++++ + .++ +.+....... ...+.+.+.++.++|+......+++.+++++
T Consensus 234 vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 310 (409)
T PLN00143 234 VITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPA---PFPPTFIQAAIPEILEKTTEDFFSKTINILR 310 (409)
T ss_pred EEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhcc---CCCCchHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 899999999998878 999883 3 333 3333222111 1235677777777776322345677888888
Q ss_pred HHHHHHHHHHHhCCCcc-c-cCC-CcEEEEEeCC----C-ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCC
Q psy16848 390 DIVAYLRNELIQIGFPV-E-HTP-SHIIPIKIGN----P-ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPF 461 (514)
Q Consensus 390 ~~~~~l~~~L~~~g~~~-~-~~~-~~~~~i~l~~----~-~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~ 461 (514)
++++.+.+.|++++... . .+. +.+++++++. . .+..+++..+++++||.+.|+..+. .++++|++++
T Consensus 311 ~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~---~~~~iRi~~~-- 385 (409)
T PLN00143 311 AALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVG---LKNWLRITFA-- 385 (409)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccC---CCCeEEEEEc--
Confidence 88899999998874322 2 343 4577788763 1 2356777666568999999998653 3579999998
Q ss_pred CCHHHHHHHHHHHHHHHHHc
Q psy16848 462 HTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 462 ~t~e~id~~~~~l~~~l~~~ 481 (514)
.+++++++.+++|++++++.
T Consensus 386 ~~~~~l~~al~rl~~~l~~~ 405 (409)
T PLN00143 386 VEQSSLEDGLGRLKSFCGRH 405 (409)
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 46899999999999988765
No 134
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=3.8e-25 Score=224.06 Aligned_cols=323 Identities=20% Similarity=0.173 Sum_probs=223.9
Q ss_pred cCCceeeecccCCC-CC-ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC----cEEEEeccc-cc
Q psy16848 15 KSNRVTCRLSSVQY-KV-PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE----AGLVFTSCY-VA 87 (514)
Q Consensus 15 ~~g~~~~d~~~~~~-~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~----~~i~~~sGt-~a 87 (514)
+.+...+|+..++. .. .|.+.+++.+..... .+....|..++.+++++++.+.+|.+ ..+++++|+ ++
T Consensus 18 ~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~-----~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~ 92 (357)
T TIGR03539 18 SHPDGIVDLSVGTPVDPVPPLIRAALAAAADAP-----GYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKEL 92 (357)
T ss_pred hCCCCeEEccCCCCCCCCCHHHHHHHHHHHhhC-----CCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHH
Confidence 45667899976542 22 567777776655432 12223456677777877777765532 346666665 45
Q ss_pred cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchh
Q psy16848 88 NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK 167 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (514)
+..++..+. ..+||.|+++.+.|......++..|++++.++ +.+.
T Consensus 93 i~~~~~~l~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~-------------------------------- 137 (357)
T TIGR03539 93 VAWLPTLLG-LGPGDTVVIPELAYPTYEVGALLAGATPVAAD--DPTE-------------------------------- 137 (357)
T ss_pred HHHHHHHHc-CCCCCEEEECCCCcHHHHHHHHhcCCEEeccC--Chhh--------------------------------
Confidence 555555552 23999999999999988877777776665431 1110
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH 247 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~ 247 (514)
T Consensus 138 -------------------------------------------------------------------------------- 137 (357)
T TIGR03539 138 -------------------------------------------------------------------------------- 137 (357)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCcccc--CCCccCceE
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGER--DGQLHNMDI 322 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~--~~~~~~~di 322 (514)
...++++++++++++||||.+++ +++|.++|++||+++|+||+|.....+......... .+...+..+
T Consensus 138 -------l~~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi 210 (357)
T TIGR03539 138 -------LDPVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLL 210 (357)
T ss_pred -------cCccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEE
Confidence 11135789999999999999998 678999999999999999999832222211111111 011224579
Q ss_pred EEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy16848 323 ISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNEL 399 (514)
Q Consensus 323 ~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 399 (514)
+++||||.++.+| ||+++++++++.+....... +.+.+.+.+.++.++++. ..++.+.++.++++++++.+.|
T Consensus 211 ~~~S~SK~~~~~G~R~G~~i~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L 286 (357)
T TIGR03539 211 AVHSLSKRSNLAGYRAGFVAGDPALVAELLTVRKHA--GLMVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPAL 286 (357)
T ss_pred EEeccccccCCCceeEEEEecCHHHHHHHHHHHhhc--ccCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999997767 99999999998887655433 235677777777777752 3456678888899999999999
Q ss_pred HhCCCccccCCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHH
Q psy16848 400 IQIGFPVEHTPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDL 474 (514)
Q Consensus 400 ~~~g~~~~~~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l 474 (514)
++.|+.+..+.++ ++++.++. +..++.+.| .++||.+.|+.++ ...+++++|++++. +++++++++++|
T Consensus 287 ~~~g~~~~~p~~~~~~~~~~~~--~~~~~~~~l-~~~gV~v~pg~~f-~~~~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 287 EKAGFRIDHSEAGLYLWATRGE--DAWDTVDRL-AELGILVAPGDFY-GPAGSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred HHcCCCCcCCCccEEEEEECCC--CHHHHHHHH-HhCCEEECCcccc-CCCCCCeEEEEecC--CHHHHHHHHHhh
Confidence 9888877767666 45555543 466788888 5999999998864 33456899999984 678899988876
No 135
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=2e-25 Score=226.96 Aligned_cols=327 Identities=16% Similarity=0.155 Sum_probs=230.1
Q ss_pred CCce-eeecccCC-CC-CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-cEEEEeccccc-ccc
Q psy16848 16 SNRV-TCRLSSVQ-YK-VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-AGLVFTSCYVA-NDS 90 (514)
Q Consensus 16 ~g~~-~~d~~~~~-~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~i~~~sGt~a-~~~ 90 (514)
.|+. +++++.++ .+ .+|.+.+++.+.+... ..+ +.. ...++++.++++++.+ +.+++++|++. +..
T Consensus 29 ~g~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~-~~Y-------~~~-~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~ 99 (369)
T PRK08153 29 RGRPFRARIGANESGFGPSPSVIAAMREAAAEI-WKY-------GDP-ENHDLRHALAAHHGVAPENIMVGEGIDGLLGL 99 (369)
T ss_pred cCCcceeEecCCCCCCCCCHHHHHHHHHHHHHh-hcC-------CCC-ccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHH
Confidence 5554 45786543 33 4788999888776531 111 111 1468999999998853 45777777765 445
Q ss_pred chhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHh
Q psy16848 91 TLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 91 ~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
++.+++. +||.|+++.++|......++..|.+++.++.
T Consensus 100 ~~~~~~~--~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~---------------------------------------- 137 (369)
T PRK08153 100 IVRLYVE--PGDPVVTSLGAYPTFNYHVAGFGGRLVTVPY---------------------------------------- 137 (369)
T ss_pred HHHHhcC--CCCEEEECCCcchHHHHHHHHcCCeEEEeeC----------------------------------------
Confidence 5555555 9999999999998877666666665554332
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQ 250 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 250 (514)
.++...+++
T Consensus 138 -----------------------------------------------------------------------~~~~~~~~~ 146 (369)
T PRK08153 138 -----------------------------------------------------------------------RDDREDLDA 146 (369)
T ss_pred -----------------------------------------------------------------------CCCCCCHHH
Confidence 111122223
Q ss_pred HHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHc--CCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCc
Q psy16848 251 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQH--GALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLG 328 (514)
Q Consensus 251 ~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~--gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~s 328 (514)
.++.....+++++++++|+||||.+++.+++.++++.+ ++++|+||+|.....+.. ...... ..+..++++|||
T Consensus 147 l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~---~~~~~~-~~~~~i~~~SfS 222 (369)
T PRK08153 147 LLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGA---APPIDT-DDPNVIRMRTFS 222 (369)
T ss_pred HHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCccc---chhhhh-cCCCEEEEecch
Confidence 33333344678999999999999999977777776654 899999999983322111 111111 224679999999
Q ss_pred ccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCc
Q psy16848 329 KAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFP 405 (514)
Q Consensus 329 K~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 405 (514)
|.+|.+| ||+++++++++.+......+ +.+++.+.++.++++ ..+..++.++.++++++++.+.|++.|+.
T Consensus 223 K~~g~~GlRiG~~v~~~~~~~~l~~~~~~~----~~s~~~q~~~~~~l~--~~~~~~~~~~~~~~~r~~~~~~L~~~g~~ 296 (369)
T PRK08153 223 KAYGLAGARVGYAIGAPGTIKAFDKVRNHF----GMNRIAQAAALAALK--DQAYLAEVVGKIAAARDRIAAIARANGLT 296 (369)
T ss_pred HhccCcchheeeeecCHHHHHHHHHhhcCC----CCCHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 9999778 99999999999887765433 578888888888886 33456778888899999999999988876
Q ss_pred cccCCCcEEEEEeCC-CccHHHHHHHHHHhCCeEEe-cccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 406 VEHTPSHIIPIKIGN-PALNTKICDMLLKEKGHYVQ-PINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 406 ~~~~~~~~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~-~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
+.++.+.++++.++. .....++.+.|+ ++||.++ ++. ...++++|++++ ++++++++++++++++...+
T Consensus 297 ~~p~~~~f~~~~~~~~~~~a~~l~~~l~-~~Gi~v~~p~~----~~~~~~iRis~~---~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 297 PLPSATNFVAIDCGRDGAFARAVLDGLI-ARDIFVRMPGV----APLDRCIRVSCG---PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred cCCCcCcEEEEECCCCcccHHHHHHHHH-HCCeEEeeCCC----CCCCCeEEEecC---CHHHHHHHHHHHHHHHHHhh
Confidence 656667777777752 345678888886 8999995 432 123569999998 79999999999999887653
No 136
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.95 E-value=2.2e-25 Score=230.69 Aligned_cols=365 Identities=13% Similarity=0.100 Sum_probs=233.6
Q ss_pred CCceeeecccC---CCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC--CcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK--EAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~i~~~sGt~a~ 88 (514)
+|++|+||.+. .-+ +||++.+++.+|+++....... .-..+...++.+++++.++. ++++|++|||+|+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~----~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAv 127 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLA----GCTHEPAIELAERLAALTGGTLGHAFFASDGASAV 127 (453)
T ss_pred CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCcccc----ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHH
Confidence 45555555332 112 3899999999999985432221 11246778899999998763 5788899999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccch
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICPL 166 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~ 166 (514)
+.|++...+. .-.+..++++++|.++++||.. |.++-
T Consensus 128 e~AlKlA~~~----------------------------------------~~~rg~~~r~~Ii~~~~~yHG~t~gals~- 166 (453)
T PRK06943 128 EIALKMSFHA----------------------------------------WRNRGRGDKREFVCLANGYHGETIGALGV- 166 (453)
T ss_pred HHHHHHHHHH----------------------------------------HHHhCCCCCCEEEEECCCcCCCcHHhhcc-
Confidence 9999655320 0011223566788888888621 11110
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
++.. ........+......++.++..... .+.....+..++++
T Consensus 167 ---------------------------~~~~---------~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~ 209 (453)
T PRK06943 167 ---------------------------TDVA---------LFKDAYDPLIRHAHVVASPDARGAR-PGETAADVAARALA 209 (453)
T ss_pred ---------------------------cCCh---------hhhcccccCCCCCEEECCCCccccc-cCCCHHHHHHHHHH
Confidence 0000 0000000000000000100000000 00000000012456
Q ss_pred HHHHHHhhccCCCceEEEEec-CCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCc
Q psy16848 247 HLTQVLENMDVKIPKLVAFET-VHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNM 320 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~-~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~ 320 (514)
.+++.+++. .+++++|++++ +++..|...+ +++|+++|++||+++|.||+++ +|+.|..+ ..+.+++ .|
T Consensus 210 ~l~~~l~~~-~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~f--a~~~~gv--~P 284 (453)
T PRK06943 210 DVRRLFAER-AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFF--ACEQAGV--WP 284 (453)
T ss_pred HHHHHHHhC-CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchh--HHHhCCC--CC
Confidence 667777643 35799999999 5998898766 8999999999999999999998 76665432 1234555 79
Q ss_pred eEEEcCCcccccCC---CeEEEecHHHHHHHHhhc--C--ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy16848 321 DIISGTLGKAFGNI---GGYIVGTKNFIDTIRSYA--A--GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVA 393 (514)
Q Consensus 321 di~~~S~sK~lg~~---GG~l~~~~~~~~~l~~~~--~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 393 (514)
|++ +++|++++. -|.+++++++.+.+.... . ....+++.+++.++++.++|+.+.++. +.++.+++.+
T Consensus 285 Div--t~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~---l~~~~~~~G~ 359 (453)
T PRK06943 285 DFL--CLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDD---VLARNARKSA 359 (453)
T ss_pred CeE--eeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHH
Confidence 999 899999761 277888999888775321 0 122255789999999999999987665 6778888888
Q ss_pred HHHHHHHhC-C---CccccCCCcEEEEEeCCCc-----cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCH
Q psy16848 394 YLRNELIQI-G---FPVEHTPSHIIPIKIGNPA-----LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTR 464 (514)
Q Consensus 394 ~l~~~L~~~-g---~~~~~~~~~~~~i~l~~~~-----~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~ 464 (514)
++.+.|+++ . +.-+...|.++.+++.... ....+.+.++ ++||.+.+. .+.+|++++..+|+
T Consensus 360 ~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~-~~Gll~~~~--------g~~l~~~Ppl~it~ 430 (453)
T PRK06943 360 RLRAALAPLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEAAL-ERELLLRPI--------GTTVYLMPPYVLDD 430 (453)
T ss_pred HHHHHHHHHhcCCCEEeEeccccEEEEEEccCCCcchHHHHHHHHHHH-HCCcEEEec--------CCEEEEeCCCcCCH
Confidence 888888775 2 2223456678888775211 2456778886 899998632 13699999999999
Q ss_pred HHHHHHHHHHHHHHHHc
Q psy16848 465 EMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 465 e~id~~~~~l~~~l~~~ 481 (514)
+|+++++++++++++++
T Consensus 431 ~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 431 DEIAWLAERTRATLDAT 447 (453)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999875
No 137
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.95 E-value=1.4e-25 Score=229.13 Aligned_cols=335 Identities=19% Similarity=0.198 Sum_probs=228.5
Q ss_pred eecccCCCCCChhHHHHHHHHHHHhCCCCCC--cCcccCcchHHHHHHHHHHhHcCCC---cEEEEeccccccccchhhc
Q psy16848 21 CRLSSVQYKVPKGGRKCLGEALEKFGTGAGG--TRNISGNSLFHEKLEEDVAKLHQKE---AGLVFTSCYVANDSTLFTL 95 (514)
Q Consensus 21 ~d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~la~~~~~~---~~i~~~sGt~a~~~~l~~l 95 (514)
.|-++..+..++.+.+++.+.++.++...+. +....+..+..+++++.+++++|.+ ..++++|+|+++..++.++
T Consensus 3 ld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~ 82 (376)
T TIGR01977 3 FDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGL 82 (376)
T ss_pred ccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhc
Confidence 3444444445678999999988876422211 1111122467789999999999865 3455667788888888887
Q ss_pred cccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhh
Q psy16848 96 GKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQ 175 (514)
Q Consensus 96 ~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (514)
.. +||.|+++..+|.++...+..
T Consensus 83 ~~--~gd~vl~~~~~~~~~~~~~~~------------------------------------------------------- 105 (376)
T TIGR01977 83 LK--EGDHVITTPMEHNSVARPLEC------------------------------------------------------- 105 (376)
T ss_pred cC--CCCEEEECcchhhHHHHHHHH-------------------------------------------------------
Confidence 55 999999999999887533211
Q ss_pred cCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-CChhHHHHHHhh
Q psy16848 176 HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-NDVNHLTQVLEN 254 (514)
Q Consensus 176 ~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~l~~ 254 (514)
.....|.+++.++. .+...+.+.+++
T Consensus 106 -----------------------------------------------------~~~~~g~~~~~v~~~~~~~~d~~~l~~ 132 (376)
T TIGR01977 106 -----------------------------------------------------LKEQIGVEITIVKCDNEGLISPERIKR 132 (376)
T ss_pred -----------------------------------------------------HHHHcCcEEEEEecCCCCCcCHHHHHH
Confidence 01112333333331 111112223333
Q ss_pred ccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc-C
Q psy16848 255 MDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG-N 333 (514)
Q Consensus 255 ~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg-~ 333 (514)
..+++++++++++++||||.+.|+++|.++|+++|+++|+|+++++|.. +......++|++++|+||+++ +
T Consensus 133 ~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~--------~~~~~~~~~D~~~~s~~K~l~~p 204 (376)
T TIGR01977 133 AIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVI--------PIDMTELAIDMLAFTGHKGLLGP 204 (376)
T ss_pred hcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCcc--------CCCchhcCCCEEEecccccccCC
Confidence 3345689999999999999999999999999999999999999997764 111113478999999999985 4
Q ss_pred CC-eEEEecHHH-HHHHHhhcC---------------ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q psy16848 334 IG-GYIVGTKNF-IDTIRSYAA---------------GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLR 396 (514)
Q Consensus 334 ~G-G~l~~~~~~-~~~l~~~~~---------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 396 (514)
.| |+++.+++. +..+..... .+. ..+.+.....+..++++.+.+.+.+.++++.+++.+++.
T Consensus 205 ~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~ 283 (376)
T TIGR01977 205 QGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFE-SGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLL 283 (376)
T ss_pred CCceEEEEcCCcCcCceecCCCccccccccccccchhhcc-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 45 666555443 111111000 010 123456667788888988877788889999999999999
Q ss_pred HHHHhC-CCccccC-----CCcEEEEEeCCCccHHHHHHHHHHhC-CeEEecccCCCC-------CCCCcEEEEEeCCCC
Q psy16848 397 NELIQI-GFPVEHT-----PSHIIPIKIGNPALNTKICDMLLKEK-GHYVQPINYPTV-------PVGEEKIRLAPTPFH 462 (514)
Q Consensus 397 ~~L~~~-g~~~~~~-----~~~~~~i~l~~~~~~~~~~~~Ll~~~-GI~v~~~~~~~~-------~~~~~~iRl~~~~~~ 462 (514)
+.|.+. ++.+..+ ..+++.+.++. .+..++.+.|. ++ ||.++.+..+.. ....+.+|++++..+
T Consensus 284 ~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~L~-~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~ 361 (376)
T TIGR01977 284 NGLREINKVKIYGPADPANRVGVVSFTVEG-IDSEEVADILD-EKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFN 361 (376)
T ss_pred HHHhcCCCeEEeCCCCccccCCeEEEEECC-CCHHHHHHHHh-ccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCC
Confidence 999876 6655432 24577777754 45678889995 66 999988765432 123568999999999
Q ss_pred CHHHHHHHHHHHHH
Q psy16848 463 TREMIDKFVTDLLA 476 (514)
Q Consensus 463 t~e~id~~~~~l~~ 476 (514)
|++|+++++++|++
T Consensus 362 t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 362 TEEEIEKLLEALSE 375 (376)
T ss_pred CHHHHHHHHHHHhh
Confidence 99999999999976
No 138
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.95 E-value=1.2e-25 Score=229.97 Aligned_cols=335 Identities=18% Similarity=0.162 Sum_probs=228.2
Q ss_pred eecccCCCCCChhHHHHHHHHHHHhCCCCCCcC-cccCcchHHHHHHHHHHhHcCCC--cEEEEeccccccccchhhccc
Q psy16848 21 CRLSSVQYKVPKGGRKCLGEALEKFGTGAGGTR-NISGNSLFHEKLEEDVAKLHQKE--AGLVFTSCYVANDSTLFTLGK 97 (514)
Q Consensus 21 ~d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~~--~~i~~~sGt~a~~~~l~~l~~ 97 (514)
.|.++... .++.+.+++.+.++......+... ......+..+++++.+++++|.+ ..++++|||+++..++..+..
T Consensus 3 ld~aa~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~ 81 (379)
T TIGR03402 3 LDNNATTR-VDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALA 81 (379)
T ss_pred CCCcCCCC-CCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence 44444333 257889998888775321111111 10112456788999999999965 356667788888888876532
Q ss_pred -cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhc
Q psy16848 98 -MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQH 176 (514)
Q Consensus 98 -~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (514)
..++|+|+++..+|+++...++.
T Consensus 82 ~~~~~~~vv~~~~~~~s~~~~~~~-------------------------------------------------------- 105 (379)
T TIGR03402 82 AQPEKRHIITTAVEHPAVLSLCQH-------------------------------------------------------- 105 (379)
T ss_pred hcCCCCeEEEcccccHHHHHHHHH--------------------------------------------------------
Confidence 23678999999999887633221
Q ss_pred CceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-----CChhHHHHH
Q psy16848 177 GALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-----NDVNHLTQV 251 (514)
Q Consensus 177 ~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~ 251 (514)
+...|.+++.++. .|.+.+++.
T Consensus 106 -----------------------------------------------------~~~~G~~v~~v~~~~~g~~~~~~l~~~ 132 (379)
T TIGR03402 106 -----------------------------------------------------LEKQGYKVTYLPVDEEGRLDLEELRAA 132 (379)
T ss_pred -----------------------------------------------------HHHcCCEEEEEccCCCCcCCHHHHHHh
Confidence 1112333333331 133444444
Q ss_pred HhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccc
Q psy16848 252 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 252 l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l 331 (514)
+ +++++++++++++|++|..+|+++|.++|+++|+++++|++|+.|.. +.+....++|++++|.||.+
T Consensus 133 i----~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~--------~~~~~~~~~D~~~~s~~K~~ 200 (379)
T TIGR03402 133 I----TDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKI--------PIDLKEMNIDMLSLSGHKLH 200 (379)
T ss_pred c----CCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECccccccc--------ccCcccCCCCEEEEcHHHcC
Confidence 3 45689999999999999999999999999999999999999997643 12211347899999999977
Q ss_pred cCCC-eEEEecHHHHHHHHhhcCc-e----EeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh-C-C
Q psy16848 332 GNIG-GYIVGTKNFIDTIRSYAAG-F----IFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQ-I-G 403 (514)
Q Consensus 332 g~~G-G~l~~~~~~~~~l~~~~~~-~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g 403 (514)
|+.| |+++.+++.. +.+...+ . ....+.+.....++.+++++.. +.++++.++.+++.+++.+.|++ + +
T Consensus 201 gp~G~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~~ 277 (379)
T TIGR03402 201 GPKGVGALYIRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELAT-EHLEEENTRVRALRDRLEAGLLARIPD 277 (379)
T ss_pred CCCceEEEEECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 8877 8888776531 2111110 0 0122456666777788888764 46777888999999999999985 4 5
Q ss_pred CccccCC----CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCC----------------CCcEEEEEeCCCCC
Q psy16848 404 FPVEHTP----SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPV----------------GEEKIRLAPTPFHT 463 (514)
Q Consensus 404 ~~~~~~~----~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~----------------~~~~iRl~~~~~~t 463 (514)
+.+..+. .+++.+.++. .+..++...| +++||.++++..|.... ..+.+|+|++.++|
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t 355 (379)
T TIGR03402 278 ARLNGDPTKRLPNTVNISFEY-IEGEAILLLL-DMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNT 355 (379)
T ss_pred EEEeCCCccCCCCEEEEEecC-CCHHHHHHhh-ccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCC
Confidence 5554332 2355555543 3467888888 58999999888765431 13689999999999
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q psy16848 464 REMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 464 ~e~id~~~~~l~~~l~~~~ 482 (514)
++|||++++.|+++++++.
T Consensus 356 ~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 356 EEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887653
No 139
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.95 E-value=2.5e-26 Score=231.23 Aligned_cols=323 Identities=19% Similarity=0.171 Sum_probs=221.3
Q ss_pred ecccCCCCC-ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCC
Q psy16848 22 RLSSVQYKV-PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIP 100 (514)
Q Consensus 22 d~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~ 100 (514)
||++.++.+ +|.+.+++.+.+... . .++..+..+++++.+++++|.+..+++++||+++..++.++.. +
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~~----~----~~~~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~--~ 70 (338)
T cd06502 1 DFRSDTVTGPTPEMLEAMAAANVGD----D----VYGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQ--P 70 (338)
T ss_pred CcccccCCCCCHHHHHHHHhcccCC----c----ccCCCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcC--C
Confidence 688888776 678888887755321 1 2234567899999999999966788889999999999888865 9
Q ss_pred CceEEecCccchhhhhh---hhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcC
Q psy16848 101 GLHYISDAGNHASMIQG---IRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHG 177 (514)
Q Consensus 101 gd~v~~~~~~h~~~~~~---~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (514)
||.|+++++.|.++..+ .+..|.+++.++..+
T Consensus 71 gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--------------------------------------------- 105 (338)
T cd06502 71 GGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN--------------------------------------------- 105 (338)
T ss_pred CCeEEEecCcceeeecCCcHHHHcCceEEeecCCC---------------------------------------------
Confidence 99999999999776532 223444444332210
Q ss_pred ceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhcc-
Q psy16848 178 ALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMD- 256 (514)
Q Consensus 178 ~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~- 256 (514)
...|.+.+++.+.+..
T Consensus 106 ---------------------------------------------------------------~~~d~~~l~~~i~~~~~ 122 (338)
T cd06502 106 ---------------------------------------------------------------GKLTPEDLEAAIRPRDD 122 (338)
T ss_pred ---------------------------------------------------------------CcCCHHHHHHHhhccCC
Confidence 0124555555554321
Q ss_pred --CCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccc
Q psy16848 257 --VKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 257 --~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l 331 (514)
.++++++++++++|+ |.+++ +++|.++|+++|+++|+||+|..+.....+.... ....++|+++.|+||++
T Consensus 123 ~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~---~~~~~~d~~~~s~sK~~ 198 (338)
T cd06502 123 IHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALK---TYKSGVDSVSFCLSKGG 198 (338)
T ss_pred CcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHH---HHHhcCCEEEEeccccC
Confidence 136899999999998 54445 7889999999999999999986443221121111 11236788899999999
Q ss_pred cCCCe-EEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCC
Q psy16848 332 GNIGG-YIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTP 410 (514)
Q Consensus 332 g~~GG-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 410 (514)
+.+|| +++.++++++.+......+..+.+.++..++++..+|+. ....+..+++.++++++.+.|+++++.+.++.
T Consensus 199 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 275 (338)
T cd06502 199 GAPVGAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALEN---DLWLRRLRHDHEMARRLAEALEELGGLESEVQ 275 (338)
T ss_pred CCccceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcC---chHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 87664 456788898888765433322334555666666666652 23345667888888999999999877666667
Q ss_pred CcEEEEEeCCC-ccHHHHHHHHH--HhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 411 SHIIPIKIGNP-ALNTKICDMLL--KEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 411 ~~~~~i~l~~~-~~~~~~~~~Ll--~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
++++.+.++.. .....+.+.+. .++|+.+.+.. .+++|++++..++++|++++++++++
T Consensus 276 ~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~~~-------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 276 TNIVLLDPVEANAVFVELSKEAIERRGEGVLFYAWG-------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred CCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEecC-------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 77877776532 22233433332 15799986532 26899999999999999999999865
No 140
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.95 E-value=1.8e-25 Score=232.49 Aligned_cols=207 Identities=20% Similarity=0.265 Sum_probs=153.7
Q ss_pred CCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCceEEEcCCcccc
Q psy16848 257 VKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 257 ~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l 331 (514)
.+++++|++++++...|.+++ +++|+++|++||+++|+||+|+ +++.|... ++ ...+. .+|++ |++|.+
T Consensus 217 ~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~-a~-~~~~v--~pDi~--t~sK~l 290 (451)
T PRK06918 217 PETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYF-AI-EHFDV--VPDLI--TVSKSL 290 (451)
T ss_pred CCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCcee-hh-HhcCC--CCCEE--eeehhh
Confidence 356899999999988898766 8999999999999999999998 55554321 11 22232 58877 999999
Q ss_pred cCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--CCcc
Q psy16848 332 GNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI--GFPV 406 (514)
Q Consensus 332 g~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~ 406 (514)
++ | |++++++++.+.+....... +.+.+++.++++.++++.+.++. ..++.+++.+++.+.|+++ +.+.
T Consensus 291 ~~-G~pig~v~~~~~i~~~~~~~~~~~--T~~g~~l~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~~~ 364 (451)
T PRK06918 291 GA-GVPISGVIGRKEIMDESAPGELGG--TYAGSPLGCAAALAVLDIIEKEN---LNDRAIELGKVVMNRFEEMKNKYNC 364 (451)
T ss_pred cC-CCccEEEEEcHHHHhccCCCCcCc--CCCcCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 86 6 99999999988876544333 55789999999999999886555 5556666667777766654 2322
Q ss_pred ---ccCCCcEEEEEeC--------CCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q psy16848 407 ---EHTPSHIIPIKIG--------NPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLL 475 (514)
Q Consensus 407 ---~~~~~~~~~i~l~--------~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~ 475 (514)
+...|.++.+.+. +......+.+.++ ++||.+.++..+ .+.+|++++..++++++++++++|+
T Consensus 365 ~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~Gvlv~~~~~~-----~~~lrl~p~l~~t~~~id~~l~~l~ 438 (451)
T PRK06918 365 IGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEAN-KRGLLLLSAGTY-----GNVIRVLMPLVITDEQLEEGLTIIE 438 (451)
T ss_pred ceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHH-HCCeEEeecCCC-----CCEEEEECCCccCHHHHHHHHHHHH
Confidence 3445666665552 1122456777775 899999875321 3689999998899999999999999
Q ss_pred HHHHHc
Q psy16848 476 AVWKSL 481 (514)
Q Consensus 476 ~~l~~~ 481 (514)
++++++
T Consensus 439 ~~l~~~ 444 (451)
T PRK06918 439 ESLQAC 444 (451)
T ss_pred HHHHHH
Confidence 998765
No 141
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.95 E-value=2.7e-25 Score=235.42 Aligned_cols=343 Identities=12% Similarity=0.080 Sum_probs=223.1
Q ss_pred cCCceeeecccCCC-----CCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--C-CcEEEEecc-c
Q psy16848 15 KSNRVTCRLSSVQY-----KVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--K-EAGLVFTSC-Y 85 (514)
Q Consensus 15 ~~g~~~~d~~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~-~~~i~~~sG-t 85 (514)
.+|..+++++.++. -.++++.+++.+.+.. .. ++....|..++.+++.+.+.+..+ . +..|++++| +
T Consensus 143 ~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~-~~---~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~ 218 (517)
T PRK13355 143 AAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD-TE---GYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVS 218 (517)
T ss_pred HcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc-CC---CCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHH
Confidence 46778899865332 2256788888887753 11 222233444444444444433222 1 233556655 5
Q ss_pred cccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccc
Q psy16848 86 VANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP 165 (514)
Q Consensus 86 ~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (514)
+++..++.++.. +||.|+++.++|......++..|.+++.++...
T Consensus 219 eal~~~~~~l~~--~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~--------------------------------- 263 (517)
T PRK13355 219 ELINLSMSALLD--DGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDE--------------------------------- 263 (517)
T ss_pred HHHHHHHHHhCC--CCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCc---------------------------------
Confidence 567777777765 999999999999887776666666655443210
Q ss_pred hhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCCh
Q psy16848 166 LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDV 245 (514)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~ 245 (514)
.+++
T Consensus 264 ----------------------------------------------------------------------------~~~~ 267 (517)
T PRK13355 264 ----------------------------------------------------------------------------QSEW 267 (517)
T ss_pred ----------------------------------------------------------------------------ccCC
Confidence 1122
Q ss_pred hHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCccCce
Q psy16848 246 NHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLHNMD 321 (514)
Q Consensus 246 ~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~~d 321 (514)
..+.+.+++..+++++++++++|+||||.+++ +++|.++|++|++++|+||+|....+ +....++..... ....
T Consensus 268 ~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~--~~~v 345 (517)
T PRK13355 268 YPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAP--DLFC 345 (517)
T ss_pred CCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCC--CCeE
Confidence 22333444444567899999999999999999 89999999999999999999994433 222222222211 1235
Q ss_pred EEEcCCcccccCCC---eEEEec--HHH----HHHHHhhcCceEeccCCcHHHHHHHHHHHHHhh--hchHHHHHHHHHH
Q psy16848 322 IISGTLGKAFGNIG---GYIVGT--KNF----IDTIRSYAAGFIFTTSLPPTVLAGAREAIRILS--SQEGVELRAKHQD 390 (514)
Q Consensus 322 i~~~S~sK~lg~~G---G~l~~~--~~~----~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~ 390 (514)
++++||||.++.+| ||++.+ +++ ++.+.... .. ..+.+.+.+.++.++|+... ...+.+. .++.+
T Consensus 346 i~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~-~~--~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~ 421 (517)
T PRK13355 346 VTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLA-NM--RLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYE 421 (517)
T ss_pred EEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHh-cC--cCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHH
Confidence 66799999998878 999853 433 33343222 11 22466777778877775211 1223332 34455
Q ss_pred HHHHHHHHHHhC-CCccccCCCcEEE-EEeCCC----ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCH
Q psy16848 391 IVAYLRNELIQI-GFPVEHTPSHIIP-IKIGNP----ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTR 464 (514)
Q Consensus 391 ~~~~l~~~L~~~-g~~~~~~~~~~~~-i~l~~~----~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~ 464 (514)
+++++.+.|+++ |+.+..+.++|+. ++++.. .+..+++..+++++||.+.|+..|. ..+++++|+++. .++
T Consensus 422 ~r~~l~~~L~~~~g~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~-~~~~~~~Ris~~--~~~ 498 (517)
T PRK13355 422 QRELVYNALNAIPGISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFN-WDKPDHFRVVYL--PRL 498 (517)
T ss_pred HHHHHHHHHhcCCCcccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhC-CCCcCEEEEEeC--CCH
Confidence 678899999888 8888788877544 466532 2355677666679999999998754 235789999996 688
Q ss_pred HHHHHHHHHHHHHHHHc
Q psy16848 465 EMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 465 e~id~~~~~l~~~l~~~ 481 (514)
+++++++++|+++++..
T Consensus 499 ~~l~~a~~rl~~~~~~~ 515 (517)
T PRK13355 499 EDLEDAMDRLADFFSYY 515 (517)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998754
No 142
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.95 E-value=1.8e-25 Score=227.01 Aligned_cols=321 Identities=15% Similarity=0.119 Sum_probs=220.5
Q ss_pred hHHHHHHHHHHHhCCCCCCcCccc-----CcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEec
Q psy16848 33 GGRKCLGEALEKFGTGAGGTRNIS-----GNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISD 107 (514)
Q Consensus 33 ~~~~a~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~ 107 (514)
.+.+++.+++..|+.+++++.... ...+...++++.+++++|.+++++++++++++..++.++.. +||.|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~--~gd~Vl~~ 89 (361)
T cd06452 12 RLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCE--KGDWVVVD 89 (361)
T ss_pred CCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcC--CCCEEEEc
Confidence 455667777777775555443322 22467889999999999998888888888899989988866 99999999
Q ss_pred CccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccc
Q psy16848 108 AGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 108 ~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
.+.|.+...+++..|++++.++.+... .|
T Consensus 90 ~~~~~~~~~~~~~~g~~~~~v~~~~~~---------------------~~------------------------------ 118 (361)
T cd06452 90 GLAHYTSYVAAERAGLNVREVPNTGHP---------------------EY------------------------------ 118 (361)
T ss_pred CCcchHHHHHHHhcCCEEEEEecCCCC---------------------Cc------------------------------
Confidence 999999887777777776655431000 00
Q ss_pred ccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhcc---CCCceEEE
Q psy16848 188 VGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMD---VKIPKLVA 264 (514)
Q Consensus 188 ~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~---~~~~~~vv 264 (514)
..|.+.+++.+++.. .+++++++
T Consensus 119 ------------------------------------------------------~~d~~~l~~~l~~~~~~~~~~~~lv~ 144 (361)
T cd06452 119 ------------------------------------------------------HITPEGYAEVIEEVKDEFGKPPALAL 144 (361)
T ss_pred ------------------------------------------------------ccCHHHHHHHHHHHhhccCCCceEEE
Confidence 014455555554322 13588999
Q ss_pred EecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC--eEEEecH
Q psy16848 265 FETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG--GYIVGTK 342 (514)
Q Consensus 265 ~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G--G~l~~~~ 342 (514)
+++++||+|...++++|.++|+++|+++|+|++|+.|.. +......+.|++++|+||++++++ |++++++
T Consensus 145 l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~--------~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~ 216 (361)
T cd06452 145 LTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRM--------PVSGKELGADFIVGSGHKSMAASAPIGVLATTE 216 (361)
T ss_pred EECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCc--------CCCHHHcCCCEEEecCCccccCCCCeEEEEECH
Confidence 999999999999999999999999999999999986543 112223367999999999997533 9999999
Q ss_pred HHHHHHHhhcCceE------eccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc---cCCCc
Q psy16848 343 NFIDTIRSYAAGFI------FTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE---HTPSH 412 (514)
Q Consensus 343 ~~~~~l~~~~~~~~------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~~~ 412 (514)
++++.+......+. ...+.+...+.++.++++... +.++ ...+..++.+++.+.|+++ |+.+. .+..+
T Consensus 217 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~~~-~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n 294 (361)
T cd06452 217 EWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVK-ERVK-RWDEEVEKARWFVAELEKIEGIKQLGEKPKNHD 294 (361)
T ss_pred HHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCc
Confidence 99998866543321 111222233444455555432 2222 2333345568899999998 88765 23445
Q ss_pred EEEEEeCC--------CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 413 IIPIKIGN--------PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 413 ~~~i~l~~--------~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
++.+..+. .....++.+.|+ ++||.+.. +...+++|++.. ..++++++.++++|+++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~gI~~~~------~~~~~~~ri~~~-g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 295 LMFFETPSFDEIAKKHKRRGYFLYSELK-KRGIHGIK------PGLTRYFKLSTY-GLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred eEEEEcCCcchhhhhccccchhHHHHHH-HcCceEEc------CCCceEEEEEec-CCCHHHHHHHHHHHHHHh
Confidence 66666541 111236888995 88999531 122458899883 469999999999998764
No 143
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.95 E-value=1.6e-25 Score=229.08 Aligned_cols=218 Identities=21% Similarity=0.194 Sum_probs=160.7
Q ss_pred HhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccc
Q psy16848 252 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 252 l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l 331 (514)
+++..+++++++++++++||||.+.|+++|.++|+++|+++++|++++.|.. +......++|++++|+||++
T Consensus 133 l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~--------~~~~~~~~~D~~~~s~~K~~ 204 (382)
T TIGR03403 133 VREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKI--------PVDVQKAGVDFLSFSAHKFH 204 (382)
T ss_pred HHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCC--------ccCccccCCCEEEEcchhhC
Confidence 3333345689999999999999999999999999999999999999986643 12222347899999999998
Q ss_pred cCCC-eEEEecHHHHHHHHhhcCce-----EeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CC
Q psy16848 332 GNIG-GYIVGTKNFIDTIRSYAAGF-----IFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GF 404 (514)
Q Consensus 332 g~~G-G~l~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 404 (514)
|++| |+++.++... +.+...+. ....+.+...+.++..+++... +.++...++.+++++++.+.|+++ ++
T Consensus 205 gp~G~g~l~vr~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~~ 281 (382)
T TIGR03403 205 GPKGVGGLYIRKGVE--LTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLAN-EYLDFEKSHVRRLRDRLEDALLELPDV 281 (382)
T ss_pred CCCceEEEEECCCCC--CCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 9888 8887665431 11111000 0123466677777778887653 356778889999999999999886 67
Q ss_pred ccccCC----CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCC----------------CCcEEEEEeCCCCCH
Q psy16848 405 PVEHTP----SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPV----------------GEEKIRLAPTPFHTR 464 (514)
Q Consensus 405 ~~~~~~----~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~----------------~~~~iRl~~~~~~t~ 464 (514)
.+..+. .+++.+.++. .+..++...| .++||.++.|..|.... ..+.+|++++..+|+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~ 359 (382)
T TIGR03403 282 FVVGDREHRVPNTILISIKG-VEGEAMLWDL-NKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTE 359 (382)
T ss_pred EEECCCCCCcCCEEEEEeCC-CCHHHHHHhh-ccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCH
Confidence 666542 3366666653 3467788887 59999999876553110 136899999999999
Q ss_pred HHHHHHHHHHHHHHHHcC
Q psy16848 465 EMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 465 e~id~~~~~l~~~l~~~~ 482 (514)
+|+|+++++|++++++++
T Consensus 360 ~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 360 EEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999987764
No 144
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.95 E-value=2.6e-25 Score=228.57 Aligned_cols=360 Identities=19% Similarity=0.153 Sum_probs=237.7
Q ss_pred CCceeeeccc---CCCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSS---VQYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~---~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|++|+|+.+ +..+ +||++.+++.+|+++....... .-..+...++.+++++.+. .++++|++||++|+
T Consensus 42 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~----~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAv 117 (429)
T PRK06173 42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFG----GFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAV 117 (429)
T ss_pred CCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCcccc----ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHH
Confidence 5667777743 2233 3899999999999985432111 1124677889999999873 56789999999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccch
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICPL 166 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~ 166 (514)
+.|++..... .-.+..+++++++.+++.||.. +.+.
T Consensus 118 e~AlklAr~~----------------------------------------~~~~g~~~r~~ii~~~~~yHG~t~~a~s-- 155 (429)
T PRK06173 118 EVAMKMALQY----------------------------------------QQAKGEVQRTKFATIRSGYHGDTWHAMS-- 155 (429)
T ss_pred HHHHHHHHHH----------------------------------------HHHhCCCCCcEEEEECCCcCCcchhhhc--
Confidence 9999654320 0001124567788888888621 1111
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
.++ ..................+|.++.. .+ ..+...+++
T Consensus 156 --------------------------~~~--------~~~~~~~~~~~~~~~~~~~~~p~~~----~~---~~~~~~~l~ 194 (429)
T PRK06173 156 --------------------------VCD--------PVTGMHGLFNHSLPVQYFLPQPSIK----FG---EEWNDEAIE 194 (429)
T ss_pred --------------------------cCC--------CchhhhhcccccCCCCeEeCCCCcc----cc---hhHHHHHHH
Confidence 000 0000000000000000001111000 00 000112355
Q ss_pred HHHHHHhhccCCCceEEEEecC-CCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCc-cccCCCccCc
Q psy16848 247 HLTQVLENMDVKIPKLVAFETV-HSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGI-GERDGQLHNM 320 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~-~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~-~~~~~~~~~~ 320 (514)
.+++.+++. .+++++|++++. ++..|...+ +++|+++|++||+++|+||+++ | +|+.|.++ .+..++ .+
T Consensus 195 ~l~~~i~~~-~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~t-G-~GrtG~~~a~~~~gv--~P 269 (429)
T PRK06173 195 PLQDLLEQK-GDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIAT-G-FGRTGKLFALEHAGV--VP 269 (429)
T ss_pred HHHHHHHhC-CCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhc-C-CCcCCcchHHHhcCC--CC
Confidence 566777543 357999999996 999898865 8999999999999999999995 5 36655554 344554 78
Q ss_pred eEEEcCCcccccC---CCeEEEecHHHHHHHHhhc-C--ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q psy16848 321 DIISGTLGKAFGN---IGGYIVGTKNFIDTIRSYA-A--GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAY 394 (514)
Q Consensus 321 di~~~S~sK~lg~---~GG~l~~~~~~~~~l~~~~-~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 394 (514)
|++ +++|++++ +.+.++.++++.+.+.... . .++.++..+++.++++.++|+.+.++. .+++++++.++
T Consensus 270 Div--~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~---~~~~~~~~g~~ 344 (429)
T PRK06173 270 DIM--CIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESP---WQQNIQRIEAQ 344 (429)
T ss_pred CEE--EeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHH
Confidence 999 69999964 1266778888888775321 1 122234688999999999999886655 68888999999
Q ss_pred HHHHHHhC-CCccc---cCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHH
Q psy16848 395 LRNELIQI-GFPVE---HTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKF 470 (514)
Q Consensus 395 l~~~L~~~-g~~~~---~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~ 470 (514)
+.+.|+++ +++.+ ...|.++.+.+.+......+.+.|+ ++||.+.+. .+.+|+.++..+|++|++++
T Consensus 345 l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~-e~Gi~v~~~--------g~~l~~~Ppl~it~~ei~~~ 415 (429)
T PRK06173 345 LKQELAPAAEFDSVAEVRVLGAIGVVEMKEPVNMATLQPRFV-EHGIWVRPF--------GKLVYIMPPFIISPDELSQL 415 (429)
T ss_pred HHHHHHHhhcCCCeeeeeccceEEEEEeCCcccHHHHHHHHH-HCCeEEEec--------CCEEEEeCCccCCHHHHHHH
Confidence 99988865 44433 3467788888876545678888886 899998642 24899999999999999999
Q ss_pred HHHHHHHHHHc
Q psy16848 471 VTDLLAVWKSL 481 (514)
Q Consensus 471 ~~~l~~~l~~~ 481 (514)
+++|++++.+.
T Consensus 416 ~~~l~~~l~~~ 426 (429)
T PRK06173 416 TSGLLRVLKQE 426 (429)
T ss_pred HHHHHHHHHHH
Confidence 99999998763
No 145
>PRK06855 aminotransferase; Validated
Probab=99.95 E-value=2.9e-25 Score=230.12 Aligned_cols=228 Identities=15% Similarity=0.173 Sum_probs=161.0
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCccC
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLHN 319 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~ 319 (514)
|++.+++.+++ .++++++++++||||||.+++ +++|.++|++||+++|+||+|....+ +....++..... ..
T Consensus 158 d~~~l~~~~~~--~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~--~~ 233 (433)
T PRK06855 158 DLDDLENKVKY--NPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIG--DV 233 (433)
T ss_pred CHHHHHHHHhc--CCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcC--cC
Confidence 44555555542 134788999999999999999 78889999999999999999994433 222222222211 12
Q ss_pred ceEEEcCCcccccCCC---eEEEec-----HH---HHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhh-hchHHHHHHH
Q psy16848 320 MDIISGTLGKAFGNIG---GYIVGT-----KN---FIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILS-SQEGVELRAK 387 (514)
Q Consensus 320 ~di~~~S~sK~lg~~G---G~l~~~-----~~---~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~ 387 (514)
..++++||||.++.+| ||++++ +. +++.+..... . ....+.+.+.++..+++... +.++++.++.
T Consensus 234 ~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~ 310 (433)
T PRK06855 234 PGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKM-I--EVCSTTLPQMAIPRIMSHPEYKNYLKERNKR 310 (433)
T ss_pred CeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhc-c--ccCCChHHHHHHHHhhcCCcHHHHHHHHHHH
Confidence 4699999999998668 999873 22 2333322221 1 22456778888877775321 3467788899
Q ss_pred HHHHHHHHHHHHHhC-CCccccCCCc-EEEEEeCCCc---------------------------cHHHHHHHHHHhCCeE
Q psy16848 388 HQDIVAYLRNELIQI-GFPVEHTPSH-IIPIKIGNPA---------------------------LNTKICDMLLKEKGHY 438 (514)
Q Consensus 388 ~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~i~l~~~~---------------------------~~~~~~~~Ll~~~GI~ 438 (514)
++++++.+.+.|++. ++.+..+.++ ++++.+++.. +..+++..+++++||.
T Consensus 311 ~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~ 390 (433)
T PRK06855 311 YEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGIC 390 (433)
T ss_pred HHHHHHHHHHHHhcCCCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEE
Confidence 999999999999886 7666667665 6677776531 2456777766789999
Q ss_pred EecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 439 VQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 439 v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+.|+..+.. . ...+|++++. .+++++++.+++|++++++.
T Consensus 391 v~PG~~F~~-~-~~~~Rls~~~-~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 391 VVPLSSFCT-E-LNGFRVTLLE-RDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred EecCCcCCC-C-CCceEEEECC-CcHHHHHHHHHHHHHHHHHH
Confidence 999997542 2 3469999984 57899999999999998753
No 146
>PRK06105 aminotransferase; Provisional
Probab=99.95 E-value=2.5e-25 Score=230.88 Aligned_cols=218 Identities=20% Similarity=0.235 Sum_probs=166.5
Q ss_pred hHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCc
Q psy16848 246 NHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNM 320 (514)
Q Consensus 246 ~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~ 320 (514)
+.+++.+.+...+++++|+++++++..|...+ +++|+++|++||+++|+||+++ +|..|+.+ + .+.+++ .|
T Consensus 205 ~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f-~-~~~~~v--~P 280 (460)
T PRK06105 205 NELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMF-G-CETFGI--KP 280 (460)
T ss_pred HHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhh-h-HHhcCC--CC
Confidence 45566665443457899999999999998877 8999999999999999999996 77776532 1 234554 79
Q ss_pred eEEEcCCcccccC---CCeEEEecHHHHHHHHhhcC-----ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHH
Q psy16848 321 DIISGTLGKAFGN---IGGYIVGTKNFIDTIRSYAA-----GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIV 392 (514)
Q Consensus 321 di~~~S~sK~lg~---~GG~l~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 392 (514)
|++ +++|.+++ +.|++++++++.+.+..... .+.++++.+++.++++.++|+.+.+++ ..++.+++.
T Consensus 281 Di~--~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~---l~~~v~~~g 355 (460)
T PRK06105 281 DIL--VMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERD---LVGNAAERG 355 (460)
T ss_pred Cee--eeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHH
Confidence 999 99999975 24888899998887764211 123466899999999999999997655 788888888
Q ss_pred HHHHHHHHhC-CCcc---ccCCCcEEEEEeCCCc-----------cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEE
Q psy16848 393 AYLRNELIQI-GFPV---EHTPSHIIPIKIGNPA-----------LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLA 457 (514)
Q Consensus 393 ~~l~~~L~~~-g~~~---~~~~~~~~~i~l~~~~-----------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~ 457 (514)
+++++.|+++ ..++ +...|.++.+++.... ....+...++ ++||.+.+. .+.+|++
T Consensus 356 ~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~-~~Gvl~~~~--------g~~i~l~ 426 (460)
T PRK06105 356 ARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAH-EHGVISRAM--------GDTLAFC 426 (460)
T ss_pred HHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHH-HCCeEEEec--------CCEEEEE
Confidence 9988888776 2322 2345667777763210 1346777785 899999642 2489999
Q ss_pred eCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 458 PTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 458 ~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
++..+|++|++++++++.++++++
T Consensus 427 Ppl~it~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 427 PPLIITAAQVDEMVDRFGRALDDV 450 (460)
T ss_pred CCCccCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999875
No 147
>PRK07480 putative aminotransferase; Validated
Probab=99.95 E-value=2.3e-25 Score=230.76 Aligned_cols=364 Identities=15% Similarity=0.098 Sum_probs=228.5
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|++|+||.+. .-++ ||++.+++.+|+++...... ......+...++.+++++.+. .++++|++||++|+
T Consensus 48 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~---~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~ 124 (456)
T PRK07480 48 EGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNT---FFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEAN 124 (456)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc---ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHH
Confidence 55566666432 1223 79999999999998543211 111235778899999999884 46789999999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHH-hcccCCCcEEEeecccccc--CCccc
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLE-NMDVKIPKLVAFETVHSMT--GAICP 165 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~~~~~~~~~~~~~~~--~~~~~ 165 (514)
+.|++..... .. +..+++++++.+++.||.. +.+..
T Consensus 125 e~AlklAr~~-----------------------------------------~~~~g~~~r~~ii~~~~~yHG~tl~a~s~ 163 (456)
T PRK07480 125 DTVLRMVRHY-----------------------------------------WALKGKPQKKVIISRKNGYHGSTVAGASL 163 (456)
T ss_pred HHHHHHHHHH-----------------------------------------HHhcCCCCCcEEEEECCCcCCcchhhhhc
Confidence 9999654320 00 0113456777777777621 10000
Q ss_pred hhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCC-
Q psy16848 166 LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHND- 244 (514)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d- 244 (514)
++.. ........+.....-++.++..... .+.. ..+.++
T Consensus 164 ----------------------------~g~~---------~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~--~~~~~~~ 203 (456)
T PRK07480 164 ----------------------------GGMK---------YMHEQGDLPIPGIVHIDQPYWFGEG-GDMT--PEEFGLA 203 (456)
T ss_pred ----------------------------cCCh---------hhhcccCCCCCCCeecCCCcccccc-cCCC--hHHHHHH
Confidence 0000 0000000000000000000000000 0000 000111
Q ss_pred -hhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCcc
Q psy16848 245 -VNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLH 318 (514)
Q Consensus 245 -~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~ 318 (514)
.+.+++.+.+...+++++|++++++...|...+ +++|+++|++||+++|+||+++ +|..|+.+ ..+.+++
T Consensus 204 ~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~--a~~~~gv-- 279 (456)
T PRK07480 204 AARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWF--GSQHFGI-- 279 (456)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh--hhhhcCC--
Confidence 244555555444567999999999999999877 8999999999999999999997 66665432 2234554
Q ss_pred CceEEEcCCcccccC---CCeEEEecHHHHHHHHh--hcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHH-HHHH
Q psy16848 319 NMDIISGTLGKAFGN---IGGYIVGTKNFIDTIRS--YAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKH-QDIV 392 (514)
Q Consensus 319 ~~di~~~S~sK~lg~---~GG~l~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~-~~~~ 392 (514)
.||++ +++|.+++ +-|.+++++++.+.+.. .....+.+++.+++.++++.++|+.+.++. +.++. +++.
T Consensus 280 ~PDiv--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~~g 354 (456)
T PRK07480 280 KPDLM--TIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEG---IVERVRDDTG 354 (456)
T ss_pred CCCee--eeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH
Confidence 79999 99999976 12778888888887732 111122355889999999999999987655 66677 4777
Q ss_pred HHHHHHHHhC-CCcc---ccCCCcEEEEEeCCCc-------c----HHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEE
Q psy16848 393 AYLRNELIQI-GFPV---EHTPSHIIPIKIGNPA-------L----NTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLA 457 (514)
Q Consensus 393 ~~l~~~L~~~-g~~~---~~~~~~~~~i~l~~~~-------~----~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~ 457 (514)
+++.+.|+++ ..++ +...|.++.+++.... . ...+.+.++ ++||.+.+. .+.+|++
T Consensus 355 ~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~--------~~~l~~~ 425 (456)
T PRK07480 355 PYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCF-ANGLIMRAV--------GDRMIIS 425 (456)
T ss_pred HHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHH-HCCcEEeec--------CCEEEEE
Confidence 7777777664 2222 2345668788773210 0 235666775 899998631 2479999
Q ss_pred eCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 458 PTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 458 ~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
++..+|++|+|+++++++++++++
T Consensus 426 Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 426 PPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998875
No 148
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=2.1e-25 Score=230.91 Aligned_cols=206 Identities=24% Similarity=0.383 Sum_probs=158.0
Q ss_pred CCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCc-cccCCCccCceEEEcCCcccc
Q psy16848 257 VKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGI-GERDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 257 ~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~-~~~~~~~~~~di~~~S~sK~l 331 (514)
.+++++|++++++...|.+.| +++|+++|++||+++|+||+++ | +|+.|..+ .+..++ .+|++ +++|++
T Consensus 220 ~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G-~GrtG~~~a~~~~gv--~PDiv--~~gK~l 293 (457)
T PRK05639 220 PDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-G-IGRTGKWFASEWFEV--KPDLI--IFGKGV 293 (457)
T ss_pred CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-c-cCcCchHHHHHhcCC--CCCEE--Eechhh
Confidence 467999999999999998776 8999999999999999999999 4 34444332 244555 79999 699999
Q ss_pred cCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--CCcc
Q psy16848 332 GNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI--GFPV 406 (514)
Q Consensus 332 g~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~ 406 (514)
++ | |++++++++.+ ... ....++++.++..++++.++|+.+.++. ..++.+++.+++++.|+++ +.++
T Consensus 294 ~g-G~pi~av~~~~~i~~-~~~--~~~~~T~~g~p~~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~ 366 (457)
T PRK05639 294 AS-GMGLSGVIGRKELMD-LTS--GSALLTPAANPVISAAAEATLEIIEEEN---LLKNALKVGEFIKKRLLEMKESFEV 366 (457)
T ss_pred cC-CCcceeEEehHHHHh-hcC--CCcccCCCcCHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 75 3 88889998887 322 1223466789999999999999886655 6777788888888888774 3333
Q ss_pred ---ccCCCcEEEEEeCCC------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 407 ---EHTPSHIIPIKIGNP------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 407 ---~~~~~~~~~i~l~~~------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
+...|.++.+.+... .....+.+.++ ++|+.+.+. ....+.+|+.++..+|++|+|+++++++++
T Consensus 367 ~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~-----g~~~~~lr~~Ppl~it~~~id~~~~~l~~~ 440 (457)
T PRK05639 367 IGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAF-ELGLILPSY-----GMFGNVIRITPPLVITKEIAEKGLEIMERA 440 (457)
T ss_pred EEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHH-hCCeEEeec-----CCCCCEEEEeCCCccCHHHHHHHHHHHHHH
Confidence 344666777776321 12456778886 899999643 122468999999999999999999999999
Q ss_pred HHHc
Q psy16848 478 WKSL 481 (514)
Q Consensus 478 l~~~ 481 (514)
++++
T Consensus 441 l~~~ 444 (457)
T PRK05639 441 IKDA 444 (457)
T ss_pred HHHH
Confidence 8765
No 149
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.95 E-value=1.3e-25 Score=229.10 Aligned_cols=322 Identities=20% Similarity=0.256 Sum_probs=227.9
Q ss_pred ChhHHHHHHHHHHHhCCCCCCc--CcccCcchHHHHHHHHHHhHcCCC---cEEEEeccccccccchhhccc-cCCCceE
Q psy16848 31 PKGGRKCLGEALEKFGTGAGGT--RNISGNSLFHEKLEEDVAKLHQKE---AGLVFTSCYVANDSTLFTLGK-MIPGLHY 104 (514)
Q Consensus 31 ~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~---~~i~~~sGt~a~~~~l~~l~~-~~~gd~v 104 (514)
.+.+.+++.+.++.+...+.+. ...........++++.+++++|.+ +.++++|+|+++..++.++.. ..+||.|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~v 91 (373)
T cd06453 12 PQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEI 91 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEE
Confidence 4678888888887654322211 112223566778999999999866 456677778888888877753 1279999
Q ss_pred EecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeec
Q psy16848 105 ISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDE 184 (514)
Q Consensus 105 ~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (514)
+++.+.|.+....+..
T Consensus 92 l~~~~~~~~~~~~~~~---------------------------------------------------------------- 107 (373)
T cd06453 92 VTSVMEHHSNIVPWQQ---------------------------------------------------------------- 107 (373)
T ss_pred EECcchhHHHHHHHHH----------------------------------------------------------------
Confidence 9999999886532110
Q ss_pred cccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCC-----ChhHHHHHHhhccCCC
Q psy16848 185 VHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHN-----DVNHLTQVLENMDVKI 259 (514)
Q Consensus 185 ~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~l~~~~~~~ 259 (514)
.....|++++.++.+ |.+.+++.+ .++
T Consensus 108 --------------------------------------------~~~~~g~~~~~v~~~~~~~~d~~~l~~~l----~~~ 139 (373)
T cd06453 108 --------------------------------------------LAERTGAKLKVVPVDDDGQLDLEALEKLL----TER 139 (373)
T ss_pred --------------------------------------------HHhhcCcEEEEeecCCCCCcCHHHHHHHh----cCC
Confidence 011123333333311 344444444 346
Q ss_pred ceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-eEE
Q psy16848 260 PKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG-GYI 338 (514)
Q Consensus 260 ~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G-G~l 338 (514)
++++++++++||+|...|+++|.++|+++|+++++|++|+.+... + +.. ..++|++++|++|++++.| |++
T Consensus 140 ~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~-----~-~~~--~~~~d~~~~s~~K~~~~~g~g~~ 211 (373)
T cd06453 140 TKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMP-----V-DVQ--DLGCDFLAFSGHKMLGPTGIGVL 211 (373)
T ss_pred ceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCcee-----e-ecc--ccCCCEEEeccccccCCCCcEEE
Confidence 899999999999999999999999999999999999999865431 1 111 2368999999999998766 999
Q ss_pred EecHHHHHHHHhhcCce------------------Eec-cCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy16848 339 VGTKNFIDTIRSYAAGF------------------IFT-TSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNEL 399 (514)
Q Consensus 339 ~~~~~~~~~l~~~~~~~------------------~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 399 (514)
++++++++.+.....+. .+. .+.+.....++.++++.+.+.+.++++++.+++++++.+.|
T Consensus 212 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l 291 (373)
T cd06453 212 YGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERL 291 (373)
T ss_pred EEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 99999888776543211 011 13445556677777887776777888999999999999999
Q ss_pred HhC-CCccccC---CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCC-----CCCcEEEEEeCCCCCHHHHHHH
Q psy16848 400 IQI-GFPVEHT---PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVP-----VGEEKIRLAPTPFHTREMIDKF 470 (514)
Q Consensus 400 ~~~-g~~~~~~---~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~-----~~~~~iRl~~~~~~t~e~id~~ 470 (514)
+++ ++.+..+ .++++.+.++. .+..++.+.|. ++||.+.++..|..+ ...+++|++++..+|++|+|++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~l~-~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~ 369 (373)
T cd06453 292 SEIPGVRVYGDAEDRAGVVSFNLEG-IHPHDVATILD-QYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDAL 369 (373)
T ss_pred hcCCCeEEeCCccccCCeEEEEECC-cCHHHHHHHHH-HCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHH
Confidence 988 6666532 35577888764 35678889985 899999877654321 1256999999999999999999
Q ss_pred HHHH
Q psy16848 471 VTDL 474 (514)
Q Consensus 471 ~~~l 474 (514)
+++|
T Consensus 370 ~~~l 373 (373)
T cd06453 370 VEAL 373 (373)
T ss_pred HhhC
Confidence 9864
No 150
>PRK05839 hypothetical protein; Provisional
Probab=99.95 E-value=3.1e-25 Score=225.94 Aligned_cols=334 Identities=13% Similarity=0.079 Sum_probs=222.9
Q ss_pred CceeeecccCCC--CCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC---CCcEEEEeccccc-ccc
Q psy16848 17 NRVTCRLSSVQY--KVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ---KEAGLVFTSCYVA-NDS 90 (514)
Q Consensus 17 g~~~~d~~~~~~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~i~~~sGt~a-~~~ 90 (514)
|..++||..+.. -..+.+.+++.+.... ...+....|..++.+.+++.+.+.+| .++.|++++|++. +..
T Consensus 23 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~----~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~ 98 (374)
T PRK05839 23 EYKGLDLTIGEPQFETPKFIQDALKNNAHL----LNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFN 98 (374)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHhhc----cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 668999975442 2345666666554432 12223334556777777777777766 2345777777664 444
Q ss_pred chhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHh
Q psy16848 91 TLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 91 ~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
++.++..-.+||.|+++.++|......++..|++++.++.... +.|
T Consensus 99 ~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~---------------------~~~------------- 144 (374)
T PRK05839 99 FPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKE---------------------NDF------------- 144 (374)
T ss_pred HHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccc---------------------cCC-------------
Confidence 4454431137999999999998888777777776665443100 000
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQ 250 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 250 (514)
+.+..+.
T Consensus 145 -------------------------------------------------------------------------~~d~~~~ 151 (374)
T PRK05839 145 -------------------------------------------------------------------------TPSLNEK 151 (374)
T ss_pred -------------------------------------------------------------------------cCCcchh
Confidence 0111111
Q ss_pred HHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccC----CCccCceEE
Q psy16848 251 VLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERD----GQLHNMDII 323 (514)
Q Consensus 251 ~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~----~~~~~~di~ 323 (514)
.+ ++++++++++||||||.+++ +++|.++|+++|+++|+||+|.....+....++.... ....+..++
T Consensus 152 ~~-----~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~ 226 (374)
T PRK05839 152 EL-----QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLV 226 (374)
T ss_pred hh-----ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEE
Confidence 11 34789999999999999999 7888889999999999999999533222211111110 011257899
Q ss_pred EcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy16848 324 SGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELI 400 (514)
Q Consensus 324 ~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 400 (514)
++||||.++.+| ||+++++++++.+....... +...+.+.+.++..++. .+.++++.++.++++++.+.+.|
T Consensus 227 ~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~l- 301 (374)
T PRK05839 227 INSISKRSSAPGLRSGFIAGDASILKKYKAYRTYL--GCASPLPLQKAAAVAWL--DDEHAEFFRNIYAKNLKLAREIL- 301 (374)
T ss_pred EeccccccCCccceeEEEecCHHHHHHHHHHHhhc--CCCCChHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHhc-
Confidence 999999998878 99999999999887664433 22456666766666664 24566777888888888777655
Q ss_pred hCCCccccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCC-CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 401 QIGFPVEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVP-VGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 401 ~~g~~~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~-~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
++. .++.+.++++++++ ..++++.|++++||.+.|+..+..+ .+.+++|++++ .+++++++++++|+++++
T Consensus 302 --~~~-~p~gg~fi~~~~~~---~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 302 --GIT-IPPATFYVWLPVDN---DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALV--YDTPKLEKALEIIKTYLE 373 (374)
T ss_pred --CCC-CCCeeEEEEEeCCC---hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHhh
Confidence 333 33445577788763 5688888875699999998764432 23689999997 468999999999998864
No 151
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.95 E-value=4e-25 Score=228.42 Aligned_cols=366 Identities=18% Similarity=0.175 Sum_probs=232.1
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|++|+||.+. ..+| ||++.+++.+++++...... .. -..+...++.+++++++. .++++|++||++|+
T Consensus 47 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~---~~-~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAv 122 (445)
T PRK09221 47 DGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPA---FQ-MGHPLAFELAERLAELAPGGLDHVFFTNSGSESV 122 (445)
T ss_pred CCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccc---cc-cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHH
Confidence 56677777432 2233 79999999999998543221 11 124667889999999873 46789999999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccch
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICPL 166 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~ 166 (514)
+.|++...... -.+....++++|.+++.||.. |.+.
T Consensus 123 e~AlklAr~~~----------------------------------------~~~g~~~r~~ii~~~~~yHG~t~gals-- 160 (445)
T PRK09221 123 DTALKIALAYH----------------------------------------RARGQGTRTRLIGRERGYHGVGFGGIS-- 160 (445)
T ss_pred HHHHHHHHHHH----------------------------------------HhcCCCCCcEEEEECCCcCccchhhhc--
Confidence 99996543200 000112356778888888621 1111
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecch-HHHHhhCCCCEEEecCCCh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASM-IQGIRNSSAPKIIYRHNDV 245 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~-~~~~~~~g~~~~~v~~~d~ 245 (514)
..+. ..-......+.....-+|.++ .... ..+...........
T Consensus 161 --------------------------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 204 (445)
T PRK09221 161 --------------------------VGGI---------VNNRKMFGGLLPGVDHLPHTLDLPEN-AFSKGQPEHGAELA 204 (445)
T ss_pred --------------------------cCCC---------hhhhhccCCCCCCCeEeCCCcccccc-ccCCChHHHHHHHH
Confidence 0000 000000000000000000000 0000 00000000000013
Q ss_pred hHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCc
Q psy16848 246 NHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNM 320 (514)
Q Consensus 246 ~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~ 320 (514)
+.+++.++....+++++|+++++++..|...+ +++|+++|++||+++|+||+++ +|..|..+ ..+.+++ .+
T Consensus 205 ~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~--~~~~~gv--~P 280 (445)
T PRK09221 205 DDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAF--AAERFGV--TP 280 (445)
T ss_pred HHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhh--HHHhcCC--CC
Confidence 45666666544467899999999999999988 9999999999999999999997 55554321 1234444 78
Q ss_pred eEEEcCCcccccCC---CeEEEecHHHHHHHHhhcC-----ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHH
Q psy16848 321 DIISGTLGKAFGNI---GGYIVGTKNFIDTIRSYAA-----GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIV 392 (514)
Q Consensus 321 di~~~S~sK~lg~~---GG~l~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 392 (514)
|++ +++|.+++. .|.+++++++.+.+..... ...++++.+++.++++.++|+.+.++. +.++.+++.
T Consensus 281 Di~--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~---l~~~~~~~g 355 (445)
T PRK09221 281 DII--TFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREED---LFERAAELA 355 (445)
T ss_pred CEE--EeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhcc---HHHHHHHHH
Confidence 998 999999752 2778888888887753110 122355789999999999999886554 678899999
Q ss_pred HHHHHHHHhC-CCcc---ccCCCcEEEEEeCCC-----ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCC
Q psy16848 393 AYLRNELIQI-GFPV---EHTPSHIIPIKIGNP-----ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHT 463 (514)
Q Consensus 393 ~~l~~~L~~~-g~~~---~~~~~~~~~i~l~~~-----~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t 463 (514)
+++++.|+++ +.+. +...|.+..+.+... .....+.+.++ ++||.+.+. .+.+|++++..+|
T Consensus 356 ~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~--------~~~lr~~Ppl~~t 426 (445)
T PRK09221 356 PYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCF-EKGLLVRYT--------GDTIALSPPLIIE 426 (445)
T ss_pred HHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHH-HCCeEEeec--------CCEEEEECCccCC
Confidence 9999988876 4332 233455666665321 12457788886 899998631 2589999999999
Q ss_pred HHHHHHHHHHHHHHHHHc
Q psy16848 464 REMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 464 ~e~id~~~~~l~~~l~~~ 481 (514)
++|+++++++|+++++++
T Consensus 427 ~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 427 KAQIDELVDALGDALRAV 444 (445)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998764
No 152
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.1e-25 Score=228.78 Aligned_cols=320 Identities=20% Similarity=0.175 Sum_probs=222.9
Q ss_pred CceeeecccC-CCCC-ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC--cEEEEeccccc-cccc
Q psy16848 17 NRVTCRLSSV-QYKV-PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE--AGLVFTSCYVA-NDST 91 (514)
Q Consensus 17 g~~~~d~~~~-~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~~i~~~sGt~a-~~~~ 91 (514)
+..++|++.+ .+++ .|.+.+++.+.+.... .+ +. ....++++.++++++.+ ..+++++|+++ +..+
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~y-------~~-~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~ 103 (361)
T PRK00950 33 PESIIKLGSNENPLGPSPKAVEAIEKELSKIH-RY-------PE-PDAPELREALSKYTGVPVENIIVGGDGMDEVIDTL 103 (361)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHHHHHhhc-CC-------CC-CCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHH
Confidence 4478999765 3444 6788888887766421 11 11 12378999999999864 34443777654 5556
Q ss_pred hhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhh
Q psy16848 92 LFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCE 171 (514)
Q Consensus 92 l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (514)
+.++.. +||.|+++.+.|......++..|.+++.++..+
T Consensus 104 ~~~~~~--~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~--------------------------------------- 142 (361)
T PRK00950 104 MRTFID--PGDEVIIPTPTFSYYEISAKAHGAKPVYAKREE--------------------------------------- 142 (361)
T ss_pred HHHhcC--CCCEEEEcCCChHHHHHHHHHcCCEEEEeecCC---------------------------------------
Confidence 666655 999999999988776666666666555433100
Q ss_pred hhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHH
Q psy16848 172 VSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQV 251 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~ 251 (514)
+. ..+.+.+++.
T Consensus 143 -----------------------~~---------------------------------------------~~~~~~l~~~ 154 (361)
T PRK00950 143 -----------------------DF---------------------------------------------SLDVDSVLNA 154 (361)
T ss_pred -----------------------CC---------------------------------------------CcCHHHHHHH
Confidence 00 0133444443
Q ss_pred HhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccc
Q psy16848 252 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 252 l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l 331 (514)
+ +++++++++++|+||||.++|.+++.++|+++|+++|+||+|.... +... ..... ..+..++++||||.+
T Consensus 155 ~----~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~-~~~~---~~~~~-~~~~vi~~~S~SK~~ 225 (361)
T PRK00950 155 I----TEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFA-EYDY---TPLAL-EYDNLIIGRTFSKVF 225 (361)
T ss_pred h----ccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhC-ccch---HHHHH-hcCCEEEEEeehHhh
Confidence 3 3457899999999999999999999999999999999999998332 2111 11111 124578999999999
Q ss_pred cCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCcccc
Q psy16848 332 GNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEH 408 (514)
Q Consensus 332 g~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 408 (514)
|.+| ||+++++++++.+......+ ..+.+.+.++..+++. .+.+++.+++++++++++.+.|. +.+.+
T Consensus 226 g~~GlRiG~~~~~~~~~~~~~~~~~~~----~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~---~~~~~ 296 (361)
T PRK00950 226 GLAGLRIGYGFVPEWLIDYYMRAKTPF----SLTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP---FKVYP 296 (361)
T ss_pred cCchhhcchhcCCHHHHHHHHHhcCCC----CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC---eeECC
Confidence 9778 99999999998887765443 3567777777777752 23456667777777777776665 44445
Q ss_pred CCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 409 TPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 409 ~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
+.++++++.++ ..+..++++.|. ++||.+.++..+. ..+++++|++++ +.+++++++++|++++
T Consensus 297 ~~~~~i~~~~~-~~~~~~~~~~l~-~~gv~v~~~~~f~-~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 297 SEANFVLVDVT-PMTAKEFCEELL-KRGVIVRDCTSFR-GLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred CcceEEEEECC-CCCHHHHHHHHH-HCCEEEeeCCccC-CCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 56677888873 346789999996 8899999876532 234679999998 7889999999999875
No 153
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=1.6e-25 Score=234.39 Aligned_cols=314 Identities=12% Similarity=0.092 Sum_probs=214.1
Q ss_pred ccCcchHHHHHHHHHHhHcC------CCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhh-cCCCCeee
Q psy16848 55 ISGNSLFHEKLEEDVAKLHQ------KEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIR-NSSAPKII 127 (514)
Q Consensus 55 ~~~~~~~~~~~~~~la~~~~------~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~-~~~~~~~~ 127 (514)
..|..++.+++.+.+.+.+| .++.++++++++|+..++.+++. |||.|+++.++|......++ ..|.+++.
T Consensus 93 ~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~--pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~ 170 (496)
T PLN02376 93 YHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLAD--PGDVFLIPSPYYAAFDRDLRWRTGVEIIP 170 (496)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCC--CCCEEEECCCCccchHHHHHhhCCCEEEE
Confidence 34555666666666665544 22344444455678888888876 99999999999998876665 35666665
Q ss_pred ccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhh
Q psy16848 128 YRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHN 207 (514)
Q Consensus 128 ~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~ 207 (514)
++....+ +.
T Consensus 171 v~~~~~~------------------------------------------------------------~~----------- 179 (496)
T PLN02376 171 VPCSSSD------------------------------------------------------------NF----------- 179 (496)
T ss_pred EeCCCCc------------------------------------------------------------cC-----------
Confidence 4431000 00
Q ss_pred HHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhcc--CCCceEEEEecCCCCCccccC---HHHHH
Q psy16848 208 MDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMD--VKIPKLVAFETVHSMTGAICP---LKELC 282 (514)
Q Consensus 208 i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~--~~~~~~vv~~~~~nptG~~~~---l~~l~ 282 (514)
.-+.+.+++.+++.. +.+++++++++|+||||.+++ +++|.
T Consensus 180 ----------------------------------~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~ 225 (496)
T PLN02376 180 ----------------------------------KLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLV 225 (496)
T ss_pred ----------------------------------cCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHH
Confidence 013455555444322 346899999999999999999 78899
Q ss_pred HHHHHcCCEEEEecccccccc-CCCCCCccccCC------CccCceEEEcCCcccccCCC---eEEEec-HHHHHHHHhh
Q psy16848 283 EVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDG------QLHNMDIISGTLGKAFGNIG---GYIVGT-KNFIDTIRSY 351 (514)
Q Consensus 283 ~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~------~~~~~di~~~S~sK~lg~~G---G~l~~~-~~~~~~l~~~ 351 (514)
++|++|++++|+||+|....+ +....++..... ...+..+++.||||.+|.+| ||++++ +.+.+.++..
T Consensus 226 ~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~ 305 (496)
T PLN02376 226 RFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKM 305 (496)
T ss_pred HHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHH
Confidence 999999999999999994433 322222221110 01123466889999999778 999985 5555555443
Q ss_pred cCceEeccCCcHHHHHHHHHHHHHh--hhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCC-cEEEEEeCCCc------
Q psy16848 352 AAGFIFTTSLPPTVLAGAREAIRIL--SSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPS-HIIPIKIGNPA------ 422 (514)
Q Consensus 352 ~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~i~l~~~~------ 422 (514)
. .+ . ..+.+.+.++...|+.. .+..+.+.+++++++++.+.+.|++.++.+..+.+ .++++.++...
T Consensus 306 ~-~~--~-~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~~~~ 381 (496)
T PLN02376 306 S-SF--G-LVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSF 381 (496)
T ss_pred h-hc--C-CCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhccCCch
Confidence 3 22 2 35777777777777522 13345667888899999999999998888776665 57778876421
Q ss_pred -cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 423 -LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 423 -~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
...++.+.++++.||.+.||..+.. ..++++|++++ ..++++++.++++|++++++.
T Consensus 382 ~~e~~l~~~ll~~~gV~v~pGs~F~~-~~~g~~Ri~fa-~~~~~~l~~al~rl~~~l~~~ 439 (496)
T PLN02376 382 ESEIELWHIIIDKVKLNVSPGSSFRC-TEPGWFRICFA-NMDDDTLHVALGRIQDFVSKN 439 (496)
T ss_pred hHHHHHHHHHHHcCCEEEeCccccCC-CCCCEEEEEee-CCCHHHHHHHHHHHHHHHHHh
Confidence 2357888887567999999987543 24679999998 356799999999999998754
No 154
>PRK07046 aminotransferase; Validated
Probab=99.95 E-value=2.7e-25 Score=229.81 Aligned_cols=340 Identities=19% Similarity=0.200 Sum_probs=231.7
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEecccccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDS 90 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~ 90 (514)
+|+.|+||.+. ..++ ||++.+++.+++++ +...+ ...+...++.+++++.++.+++.|++|||+|++.
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~-~~~~~------~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~ 145 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARR-GLTTM------LPSEDAAWVGEELARRFGLPYWQVATTATDANRF 145 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHHh-CCCCC------CCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHH
Confidence 56666666322 1223 79999999999997 22211 2347778899999999888889999999999999
Q ss_pred chhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHh
Q psy16848 91 TLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 91 ~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
|++. ++..++|++++.|+|+||.-.+.
T Consensus 146 Alrl----------------------------------------------AR~~TGr~~ii~~~g~YHG~~d~------- 172 (453)
T PRK07046 146 VLRW----------------------------------------------ARAVTGRPKILVFNGCYHGTVDD------- 172 (453)
T ss_pred HHHH----------------------------------------------HHHhhCCCEEEEECCCCCCCcHH-------
Confidence 9943 33445678888888888621100
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCc-eeeecchHHHHhhCCCCEEEecCCChhHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPE-VAIHASMIQGIRNSSAPKIIYRHNDVNHLT 249 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~-v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 249 (514)
... .+.... ...+. +..........+..++++|.+.++
T Consensus 173 -------------------~l~---------------------~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~nd~~~l~ 211 (453)
T PRK07046 173 -------------------VFV---------------------DLVDGRPVQRPG-LLGQVHDLTATTRVVEFNDLAALE 211 (453)
T ss_pred -------------------hHh---------------------hccCCCCCCCCC-CCCCCccccCceEeeCCCCHHHHH
Confidence 000 000000 00000 000000001234567788999999
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEc
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISG 325 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~ 325 (514)
+.+. .+++++|++++.+...|.+.+ +++|+++|++||+++|.||++++ ..|..+ ....+++ .+|++
T Consensus 212 ~~l~---~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tf-r~g~Gg--~~~~~gv--~PDi~-- 281 (453)
T PRK07046 212 AALA---DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTI-SSGPGG--YTRAHGL--EPDFL-- 281 (453)
T ss_pred HHhC---CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccC-ccCCcc--hhHHhCC--Cccce--
Confidence 8884 256899999999999898877 89999999999999999999983 233222 3344555 79999
Q ss_pred CCcccccCCC---eEEEecHHHHHHHHhhc-----C--ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy16848 326 TLGKAFGNIG---GYIVGTKNFIDTIRSYA-----A--GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYL 395 (514)
Q Consensus 326 S~sK~lg~~G---G~l~~~~~~~~~l~~~~-----~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 395 (514)
+++|.+|+ | |++++++++.+.+.... . ....+++.+++.++++.++|+.+.++. ..++..++.+++
T Consensus 282 t~gK~lgg-G~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~---~~~~~~~~g~~l 357 (453)
T PRK07046 282 VVGKPIAG-GVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEA---AYAHMLALAARL 357 (453)
T ss_pred eehhhhcC-CCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHH
Confidence 89999986 5 88899999988876321 1 122355789999999999999886554 677777788888
Q ss_pred HHHHHhC----CCcc-ccCCCcEEEEEeCCC--------------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEE
Q psy16848 396 RNELIQI----GFPV-EHTPSHIIPIKIGNP--------------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRL 456 (514)
Q Consensus 396 ~~~L~~~----g~~~-~~~~~~~~~i~l~~~--------------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl 456 (514)
.+.|+++ ++.. +...+.++.+.+... .....+...++ ++||++.+. .+.+++
T Consensus 358 ~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~--------~~~~~~ 428 (453)
T PRK07046 358 AAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLL-NRGVLITPF--------HNMMLV 428 (453)
T ss_pred HHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHH-HCCCEEecc--------cCcEEE
Confidence 7777653 4433 234556666665221 11235666775 899998642 135778
Q ss_pred EeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 457 APTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 457 ~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
++. +|++|+++++++++++++++
T Consensus 429 ~p~--~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 429 CPA--TTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred eCC--CCHHHHHHHHHHHHHHHHHH
Confidence 775 89999999999999998765
No 155
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.95 E-value=3.9e-25 Score=227.02 Aligned_cols=306 Identities=16% Similarity=0.130 Sum_probs=228.6
Q ss_pred cchHHHHHHHHHHhHcCCCc---EEEEeccccccccchhhccccCCCceEEecCccchhhh--hhhhcCCCCeeeccCCC
Q psy16848 58 NSLFHEKLEEDVAKLHQKEA---GLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMI--QGIRNSSAPKIIYRHND 132 (514)
Q Consensus 58 ~~~~~~~~~~~la~~~~~~~---~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~--~~~~~~~~~~~~~~~~d 132 (514)
..+.++++++++++++|.+. .++.+|||.++..++..+.+ +||.|++..+.|.+.. ..++..|.+++.++.++
T Consensus 40 ~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~--~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~ 117 (401)
T PLN02409 40 FPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLS--PGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPW 117 (401)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCC--CCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCC
Confidence 35788899999999998642 46667788888888877765 9999999998886653 22333344433322110
Q ss_pred hHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHH
Q psy16848 133 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIIS 212 (514)
Q Consensus 133 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~ 212 (514)
+.
T Consensus 118 --------------------------------------------------------------~~---------------- 119 (401)
T PLN02409 118 --------------------------------------------------------------GQ---------------- 119 (401)
T ss_pred --------------------------------------------------------------CC----------------
Confidence 00
Q ss_pred hhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHH--HHHcCC
Q psy16848 213 GTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEV--SHQHGA 290 (514)
Q Consensus 213 ~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l--~~~~gv 290 (514)
..+.+.+++.+++...++++++++++++|+||.++|+++|.++ |+++|+
T Consensus 120 -----------------------------~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~ 170 (401)
T PLN02409 120 -----------------------------GADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPA 170 (401)
T ss_pred -----------------------------CCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCc
Confidence 0145566666654211368999999999999999999999999 999999
Q ss_pred EEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc-CCC-eEEEecHHHHHHHHhhcCc-eE-----------
Q psy16848 291 LTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG-NIG-GYIVGTKNFIDTIRSYAAG-FI----------- 356 (514)
Q Consensus 291 ~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg-~~G-G~l~~~~~~~~~l~~~~~~-~~----------- 356 (514)
++|+|+++++|.. +.....++.|++++|.+|+++ +.| |+++.+++.++.+.+.... ..
T Consensus 171 ~~vvD~v~s~g~~--------~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (401)
T PLN02409 171 LLLVDGVSSIGAL--------DFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYK 242 (401)
T ss_pred EEEEEcccccCCc--------cccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHh
Confidence 9999999986643 222213478999999999994 467 9999999988887653211 00
Q ss_pred ---e-ccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCC----C-cEEEEEeCCCccHHHH
Q psy16848 357 ---F-TTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTP----S-HIIPIKIGNPALNTKI 427 (514)
Q Consensus 357 ---~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~-~~~~i~l~~~~~~~~~ 427 (514)
+ ..+.+...+.++.++++++.+.+.++++++.+++.+++.+.|+++|+.+..+. . .+.++.++...+..++
T Consensus 243 ~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~~~~~~l 322 (401)
T PLN02409 243 LGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEGIDSAEI 322 (401)
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCCCCHHHH
Confidence 0 12455667888899999887778899999999999999999998887765431 2 2455777766677889
Q ss_pred HHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Q psy16848 428 CDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 428 ~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~~ 483 (514)
.+.|++++||.+..+..+ .....+|++...+++.+++.+++++|++++++++.
T Consensus 323 ~~~l~~~~~i~i~~G~~~---~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g~ 375 (401)
T PLN02409 323 VKNAWKKYNLSLGLGLNK---VAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVGY 375 (401)
T ss_pred HHHHHHhCCEEEEcCCCc---ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 888877889999877652 23568999999999999999999999999998874
No 156
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.95 E-value=3.3e-25 Score=229.42 Aligned_cols=343 Identities=22% Similarity=0.219 Sum_probs=232.9
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHc-CCCcEEEEeccccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLH-QKEAGLVFTSCYVAND 89 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-~~~~~i~~~sGt~a~~ 89 (514)
+|+.|+|+.+. ..++ ||+|.+++.+++++. ...+ ...+...++.+++++.+ +.+++.|++|||+|++
T Consensus 97 dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~-~~~~------~~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e 169 (474)
T PLN02482 97 DGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKG-TSFG------APCLLENVLAEMVIDAVPSVEMVRFVNSGTEACM 169 (474)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHhhC-CCCC------CCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHH
Confidence 56666666432 2223 799999999999973 2211 13466778889998887 4678899999999999
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.|++ +++..++|++++.|+|+||.-.+..
T Consensus 170 ~Alk----------------------------------------------lAR~~tgr~~Ii~~~g~YHG~~~~~----- 198 (474)
T PLN02482 170 GVLR----------------------------------------------LARAYTGREKIIKFEGCYHGHADSF----- 198 (474)
T ss_pred HHHH----------------------------------------------HHHHhcCCCEEEEECCccCCCcchh-----
Confidence 9984 3344466788888888887311100
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC-ceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP-EVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~-~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
....+.+.. .+-.+ ...+|. .....+..++++|.+.+
T Consensus 199 ---------------------~~~~~~~~~--------------~~~~~~~~g~~~-------~~~~~~~~~~~nd~~~l 236 (474)
T PLN02482 199 ---------------------LVKAGSGVA--------------TLGLPDSPGVPK-------AATSATLTAPYNDLEAV 236 (474)
T ss_pred ---------------------hhhcCCCcc--------------ccCCCCCCCCCC-------CCCCCeEEecCCChHHH
Confidence 000000000 00000 000000 00124566788999999
Q ss_pred HHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEeccccccc-cCCCCCCccccCCCccCceEE
Q psy16848 249 TQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGL-YGEHGAGIGERDGQLHNMDII 323 (514)
Q Consensus 249 ~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~-~g~~~~~~~~~~~~~~~~di~ 323 (514)
++.+++. .+++++|+++++++..|.+.| +++|+++|++||+++|+||+++ |+ .+. + +..+.+++ .+|++
T Consensus 237 ~~~l~~~-~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-GfR~g~-~-ga~~~~gv--~PDi~ 310 (474)
T PLN02482 237 KKLFEAN-KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT-GFRIAY-G-GAQEYFGI--TPDLT 310 (474)
T ss_pred HHHHHhC-CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CeecCc-c-hHhHHhCC--CCCEE
Confidence 9998754 356899999999999998877 7899999999999999999997 43 332 1 23345555 78998
Q ss_pred EcCCcccccCCC---eEEEecHHHHHHHHhhcC-ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy16848 324 SGTLGKAFGNIG---GYIVGTKNFIDTIRSYAA-GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNEL 399 (514)
Q Consensus 324 ~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 399 (514)
+++|++|+ | |.+++++++.+.+..... ....+++.+++.++++.++|+.+.++. ..+++.++.+++++.|
T Consensus 311 --t~gK~lgg-G~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~---~~~~~~~~g~~l~~~L 384 (474)
T PLN02482 311 --TLGKVIGG-GLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPG---TYEYLDKITKKLIQGI 384 (474)
T ss_pred --EecchhhC-CCceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHH
Confidence 89999986 4 777899999988863221 122244689999999999999886544 7788888888888888
Q ss_pred HhC----CCccc-cCCCcEEEEEeCCC-------------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCC
Q psy16848 400 IQI----GFPVE-HTPSHIIPIKIGNP-------------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPF 461 (514)
Q Consensus 400 ~~~----g~~~~-~~~~~~~~i~l~~~-------------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~ 461 (514)
+++ ++++. ...++++.+.+... .....+.+.|+ ++||++.+..++. + .++..
T Consensus 385 ~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~-~~Gv~~~~~~~~~--------~-~psl~ 454 (474)
T PLN02482 385 LEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGML-EEGVYLAPSQFEA--------G-FTSLA 454 (474)
T ss_pred HHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHH-HCCeEEeccCCCC--------C-cCCCC
Confidence 765 44543 23344666555321 12346778886 8999997643311 1 26677
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy16848 462 HTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 462 ~t~e~id~~~~~l~~~l~~ 480 (514)
+|++|+|++++++++++++
T Consensus 455 ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 455 HTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999875
No 157
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.95 E-value=1.4e-25 Score=226.47 Aligned_cols=318 Identities=19% Similarity=0.183 Sum_probs=224.6
Q ss_pred ceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-cEEEEecc-ccccccchh
Q psy16848 18 RVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-AGLVFTSC-YVANDSTLF 93 (514)
Q Consensus 18 ~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~i~~~sG-t~a~~~~l~ 93 (514)
..+|||..++ +..+|++.+++.+++... ..+ +... ..++++.++++++.+ +.+++++| ++++..++.
T Consensus 19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~-~~y-------~~~~-~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~ 89 (346)
T TIGR01141 19 KEVIKLNSNENPFGPPPKAKEALRAEADKL-HRY-------PDPD-PAELKQALADYYGVDPEQILLGNGSDEIIELLIR 89 (346)
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHhHHHh-hcC-------CCCC-HHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHH
Confidence 4689997544 334788999999876532 111 1112 268999999999853 33445554 566767777
Q ss_pred hccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhh
Q psy16848 94 TLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVS 173 (514)
Q Consensus 94 ~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (514)
++.. +||.|+++.+.|......++..|.+++.++..+ +
T Consensus 90 ~l~~--~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~-~--------------------------------------- 127 (346)
T TIGR01141 90 AFLE--PGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDE-D--------------------------------------- 127 (346)
T ss_pred HhcC--CCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCC-C---------------------------------------
Confidence 7765 999999999988765544555555544332210 0
Q ss_pred hhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHh
Q psy16848 174 HQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLE 253 (514)
Q Consensus 174 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~ 253 (514)
...|.+.+++.
T Consensus 128 -------------------------------------------------------------------~~~d~~~l~~~-- 138 (346)
T TIGR01141 128 -------------------------------------------------------------------GQLDLEDILVA-- 138 (346)
T ss_pred -------------------------------------------------------------------CCCCHHHHHHh--
Confidence 00133444443
Q ss_pred hccCCCceEEEEecCCCCCccccCHHHHHHHHHHc--CCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccc
Q psy16848 254 NMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQH--GALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 254 ~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~--gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l 331 (514)
.+++++++++++++||||.+++++++.++|+.+ ++++|+|++|+....... ..+... ....+++++|+||++
T Consensus 139 --~~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~---~~~~~~-~~~~~i~~~S~sK~~ 212 (346)
T TIGR01141 139 --IDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPS---TLPLLA-EYPNLIVLRTLSKAF 212 (346)
T ss_pred --cCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCcc---HHHHHh-hCCCEEEEehhhHhh
Confidence 345689999999999999999999999999887 999999999982221111 111111 123578899999999
Q ss_pred cCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc
Q psy16848 332 GNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE 407 (514)
Q Consensus 332 g~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 407 (514)
|.+| ||+++++++++.++.....+ +.+++.+.++.+.++.. .+..+.+++++++++++.+.|++. |+.+.
T Consensus 213 g~~G~r~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 286 (346)
T TIGR01141 213 GLAGLRIGYAIANAEIIDALNKVRAPF----NLSRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVY 286 (346)
T ss_pred hchhhhceeeecCHHHHHHHHhccCCC----CCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEEC
Confidence 7767 99999999999887654333 45777777777777543 256778889999999999999988 87765
Q ss_pred cCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q psy16848 408 HTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLL 475 (514)
Q Consensus 408 ~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~ 475 (514)
++.+.++++.++. +..++.+.|. ++||.+.++..+... ++++|++++ ++++++++++.|+
T Consensus 287 ~~~g~~~~~~~~~--~~~~~~~~L~-~~gI~v~~g~~f~~~--~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 287 PSDANFVLIRFPR--DADALFEALL-EKGIIVRDLNSYPGL--PNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred CCcCCEEEEecCC--CHHHHHHHHH-HCCeEEEeCCCcCCC--CCeEEEecC---CHHHHHHHHHHhC
Confidence 5567788888775 5788999996 899999998754322 679999987 7999999998763
No 158
>PRK06917 hypothetical protein; Provisional
Probab=99.95 E-value=3.3e-25 Score=229.23 Aligned_cols=373 Identities=17% Similarity=0.103 Sum_probs=237.1
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|+.|+||.+. .-++ ||+|.+++.+|+++...... +.. ..+...++.+++++.+. .++++|++|||+|+
T Consensus 29 dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~-~~~---~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAv 104 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYR-SQF---TSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEAN 104 (447)
T ss_pred CCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccc-ccc---CCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHH
Confidence 56667776433 1223 89999999999998533211 111 24677889999999874 34678889999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccch
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICPL 166 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~ 166 (514)
+.|++.... | .-.+..++|++++.++|.||.. +.+.
T Consensus 105 e~AlklAr~-------------~---------------------------~~~rg~t~r~~ii~~~~~yHG~t~~als-- 142 (447)
T PRK06917 105 ETAMKIAIQ-------------H---------------------------FQERGIQGKHKILSRWMSYHGITMGALS-- 142 (447)
T ss_pred HHHHHHHHH-------------H---------------------------HHhcCCCCCCEEEEECCCcCCccHHHHH--
Confidence 999965432 0 0012234567888888888621 1110
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
..+.. ........+......++.++.... ..+.....+..++.+
T Consensus 143 --------------------------~~~~~---------~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~ 186 (447)
T PRK06917 143 --------------------------MSGHP---------LRRQRFVSLLEDYPTISAPYCYRC-PVQKVYPTCQLACAT 186 (447)
T ss_pred --------------------------hcCCc---------cccccCCCCCCCCeEeCCCccccc-ccCCChHHHHHHHHH
Confidence 00000 000000000000000000000000 000111111123455
Q ss_pred HHHHHHhhccCCCceEEEEecCCCC-CccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCc-cccCCCccC
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHSM-TGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGI-GERDGQLHN 319 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~np-tG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~-~~~~~~~~~ 319 (514)
.+++.+++...+++++|++++++.. .|.+.+ +++|+++|++||+++|.||+++ +|..|. .+ .+.+++ .
T Consensus 187 ~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~---~~a~~~~gv--~ 261 (447)
T PRK06917 187 ELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGA---MFAMEHWGV--E 261 (447)
T ss_pred HHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccc---hhhHHhcCC--C
Confidence 6677776554567999999999875 456555 8999999999999999999998 444443 22 234454 7
Q ss_pred ceEEEcCCcccccC---CCeEEEecHHHHHHHHhhcCc--eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q psy16848 320 MDIISGTLGKAFGN---IGGYIVGTKNFIDTIRSYAAG--FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAY 394 (514)
Q Consensus 320 ~di~~~S~sK~lg~---~GG~l~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 394 (514)
+|++ +++|++++ +.|++++++++.+.+...... ...+++.+++.++++.++|+.+.++. +.++++++.++
T Consensus 262 PDi~--~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~---l~~~~~~~g~~ 336 (447)
T PRK06917 262 PDIM--TLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHN---LPEKAAEKGEY 336 (447)
T ss_pred CCEE--EeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHH
Confidence 9998 89999975 237888899988877643221 12255789999999999999886555 77888888888
Q ss_pred HHHHHHhC--CCcc---ccCCCcEEEEEeCCC-----------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEe
Q psy16848 395 LRNELIQI--GFPV---EHTPSHIIPIKIGNP-----------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAP 458 (514)
Q Consensus 395 l~~~L~~~--g~~~---~~~~~~~~~i~l~~~-----------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~ 458 (514)
+++.|+++ ..+. +...|.++.+++... .....+...++ ++||.+.+..........+.+|+++
T Consensus 337 l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~~~~g~~~~~i~l~P 415 (447)
T PRK06917 337 LIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAA-KNGLLLYPAVAGQDGKEGDAVIIAP 415 (447)
T ss_pred HHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHH-hCCcEEEecccccCCCCCCEEEEEC
Confidence 88888775 2332 234566777776311 12456778886 8999997642211112246899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 459 TPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 459 ~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+..+|++|+++++++++++++++
T Consensus 416 pl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 416 PMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999875
No 159
>PRK09105 putative aminotransferase; Provisional
Probab=99.95 E-value=5.4e-25 Score=223.56 Aligned_cols=315 Identities=13% Similarity=0.152 Sum_probs=223.2
Q ss_pred eeeccc--CCCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC--cEEEEeccccccccchhhc
Q psy16848 20 TCRLSS--VQYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE--AGLVFTSCYVANDSTLFTL 95 (514)
Q Consensus 20 ~~d~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~~i~~~sGt~a~~~~l~~l 95 (514)
+++++. +.+..+|.+.+++.+.+...+ . |+... ..++++.+++++|.+ +.++++++++++..++.++
T Consensus 45 ~i~l~~~~~~~~~~~~~~~a~~~~~~~~~------~--Y~~~~-~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l 115 (370)
T PRK09105 45 AVFLNANECPLGPSPAARDAAARSAALSG------R--YDLEL-EDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAF 115 (370)
T ss_pred cEEecCCCCCCCCCHHHHHHHHHHHHHhc------C--CCCch-HHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHH
Confidence 556643 334457889999888765421 1 22222 678889999998743 3444445566777888777
Q ss_pred cccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhh
Q psy16848 96 GKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQ 175 (514)
Q Consensus 96 ~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (514)
.. +||.|+++.++|......++..|.+++.++..
T Consensus 116 ~~--~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~-------------------------------------------- 149 (370)
T PRK09105 116 TS--PTAGLVTADPTYEAGWRAADAQGAPVAKVPLR-------------------------------------------- 149 (370)
T ss_pred cC--CCCEEEEeCCChHHHHHHHHHcCCeEEEecCC--------------------------------------------
Confidence 65 99999999999998887777777766654331
Q ss_pred cCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhc
Q psy16848 176 HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENM 255 (514)
Q Consensus 176 ~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~ 255 (514)
.++..+.+.+.+.
T Consensus 150 -------------------------------------------------------------------~~~~~d~~~l~~~ 162 (370)
T PRK09105 150 -------------------------------------------------------------------ADGAHDVKAMLAA 162 (370)
T ss_pred -------------------------------------------------------------------CCCCCCHHHHHhc
Confidence 0111111222222
Q ss_pred cCCCceEEEEecCCCCCccccCHHHHHHHHHH--cCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC
Q psy16848 256 DVKIPKLVAFETVHSMTGAICPLKELCEVSHQ--HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN 333 (514)
Q Consensus 256 ~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~--~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~ 333 (514)
.++++++++++|+||||.+++.+++.++++. +++++|+||+|...... .+...... ..+..+++.||||.+|.
T Consensus 163 -~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~---~s~~~~~~-~~~~vi~~~SfSK~~g~ 237 (370)
T PRK09105 163 -DPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDA---PSVVDLVA-QRKDLIVLRTFSKLYGM 237 (370)
T ss_pred -CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccC---cchHHHHh-hCCCEEEEecccHhhcC
Confidence 2457899999999999999998777777654 48999999999732111 11111111 12467889999999998
Q ss_pred CC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCC
Q psy16848 334 IG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTP 410 (514)
Q Consensus 334 ~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 410 (514)
+| ||+++++++++.+... . ....+...+.++.++++. ..++++.+++++++++++.+.|++.|+.+..+.
T Consensus 238 ~GlRiG~~v~~~~~i~~l~~~-~----~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~ 310 (370)
T PRK09105 238 AGMRLGLAAARPDLLAKLARF-G----HNPLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCTPSQ 310 (370)
T ss_pred CccceeeeecCHHHHHHHHhc-C----CCCcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCC
Confidence 78 9999999999988765 2 224667777777777763 356677888999999999999999888877777
Q ss_pred CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 411 SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 411 ~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
++++.+.++ .+..++++.|. ++||.+.. .+ +..++++|++++ +++++++++++|++++
T Consensus 311 ~~f~~~~~~--~~~~~l~~~L~-~~gI~v~~--~~--~~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 311 ANCFMVDVK--RPAKAVADAMA-KQGVFIGR--SW--PIWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred CcEEEEeCC--CCHHHHHHHHH-HCCcEEec--CC--CCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 887777664 34678999996 78999832 21 223679999998 7899999999998865
No 160
>PRK07036 hypothetical protein; Provisional
Probab=99.95 E-value=4.8e-25 Score=228.97 Aligned_cols=218 Identities=22% Similarity=0.260 Sum_probs=162.8
Q ss_pred HHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCce
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMD 321 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~d 321 (514)
.+++.+.....+++++|+++++++..|...+ +++|+++|++||+++|+||+++ +|+.|+.+ ++...+++ .||
T Consensus 208 ~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~~gv--~PD 284 (466)
T PRK07036 208 EFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFF-ASEAVFGI--QPD 284 (466)
T ss_pred HHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhh-hhhhhcCC--CCC
Confidence 3445555444567999999999999999887 8999999999999999999997 77765422 12123454 799
Q ss_pred EEEcCCcccccCC---CeEEEecHHHHHHHHhh---c--CceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy16848 322 IISGTLGKAFGNI---GGYIVGTKNFIDTIRSY---A--AGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVA 393 (514)
Q Consensus 322 i~~~S~sK~lg~~---GG~l~~~~~~~~~l~~~---~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 393 (514)
++ +++|++++. -|.+++++++.+.+... . ...+.+++.+++.++++.++|+.+.++. +.++.+++.+
T Consensus 285 iv--t~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~---l~~~~~~~g~ 359 (466)
T PRK07036 285 II--TFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREG---LCEHVREVGP 359 (466)
T ss_pred EE--EEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH
Confidence 99 899999761 27788899998877532 1 1122255789999999999999986555 7888888888
Q ss_pred HHHHHHHhC-CCcc---ccCCCcEEEEEeCCCc-----------cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEe
Q psy16848 394 YLRNELIQI-GFPV---EHTPSHIIPIKIGNPA-----------LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAP 458 (514)
Q Consensus 394 ~l~~~L~~~-g~~~---~~~~~~~~~i~l~~~~-----------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~ 458 (514)
++++.|+++ ..+. +...|.++.+++.+.. ....+...++ ++||.+.+. .+.+|+++
T Consensus 360 ~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~--------~~~~~l~P 430 (466)
T PRK07036 360 YFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQ-ERGLLVRPL--------EHLCVLSP 430 (466)
T ss_pred HHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHH-HCCcEEeec--------CCEEEEeC
Confidence 888888765 3332 2345668888774211 1346777785 899998632 14689999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 459 TPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 459 ~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+..+|++|+++++++++++++++
T Consensus 431 pl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 431 PLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988765
No 161
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=3.8e-25 Score=221.69 Aligned_cols=262 Identities=19% Similarity=0.172 Sum_probs=194.0
Q ss_pred CceeeecCchhhHHHHHhhccCC-ceeeec----chHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCC
Q psy16848 196 AGIGERDGQLHNMDIISGTLVNP-EVAIHA----SMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHS 270 (514)
Q Consensus 196 ~g~~~~~G~~~~i~~~~~~l~~~-~v~~~~----~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~n 270 (514)
..|+.++|++++++.++. ++++ +++++. .|...+...|++++.++.++.+.+.+.+++ .+++++++++|||
T Consensus 58 ~~I~it~Gs~~~l~~~~~-~~~~~~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~~~~~~~~l~~---~~~k~v~l~nP~N 133 (332)
T PRK06425 58 IKVLIGPGLTHFIYRLLS-YINVGNIIIVEPNFNEYKGYAFTHGIRISALPFNLINNNPEILNN---YNFDLIFIVSPDN 133 (332)
T ss_pred ceEEECCCHHHHHHHHHH-HhCCCcEEEeCCChHHHHHHHHHcCCeEEEEeCCcccCcHHHHhh---cCCCEEEEeCCCC
Confidence 347778899999999997 4666 566655 557778899999999996444444555543 3678999999999
Q ss_pred CCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC---eEEEecHHH
Q psy16848 271 MTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYIVGTKNF 344 (514)
Q Consensus 271 ptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~ 344 (514)
|||.+++ +++|.++|+++++++|+||+|....... ..+...... ..+..++++||||.+|.+| ||+++++++
T Consensus 134 PTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~-~~~~~~~~~-~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~l 211 (332)
T PRK06425 134 PLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR-AEEDVLLNR-SYGNVIIGRSLTKILGIPSLRIGYIATDDYN 211 (332)
T ss_pred CcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc-chhHHHHhc-cCCCEEEEeecHHhcCCchhhheeeecCHHH
Confidence 9999999 6888888999999999999999443221 111111111 2257899999999999768 999999999
Q ss_pred HHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccc-cCCCcEEEEEeCCCcc
Q psy16848 345 IDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVE-HTPSHIIPIKIGNPAL 423 (514)
Q Consensus 345 ~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~i~l~~~~~ 423 (514)
++.+......+ +.+...+.++ .... .....++.++.++++++++.+.|++.|+.+. ++.++++++.++ +
T Consensus 212 i~~l~~~~~~~----~~~~~~~~~l-~~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~g~f~~~~~~---~ 281 (332)
T PRK06425 212 MKISRKITEPW----SVCDPAIDFI-RSID--LDYVAKHSLDIMENERSYLINNLEAMGFRAAGDPSANFITFMIP---D 281 (332)
T ss_pred HHHHHHcCCCC----ccCHHHHHHH-HHhh--hHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCceEEEEEcC---C
Confidence 99888755433 2333332221 1111 1233456788899999999999999887765 466778888876 3
Q ss_pred HHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 424 NTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 424 ~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
..++.+.|+ ++||.+.++..+. ..+++++|++++ +.+++++++++|++++
T Consensus 282 ~~~~~~~l~-~~gi~v~~~~~f~-~~~~~~iRis~~---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 282 AHDFYSYLL-KNGILVRLLDDYE-CLGEQYIRIAIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred HHHHHHHHH-HCCeEEEECCCCC-CCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 678999996 7999999987643 233579999999 8999999999999764
No 162
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.95 E-value=3.4e-25 Score=229.76 Aligned_cols=218 Identities=22% Similarity=0.292 Sum_probs=162.3
Q ss_pred hhHHHHHHhhcc--CCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCc
Q psy16848 245 VNHLTQVLENMD--VKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQL 317 (514)
Q Consensus 245 ~~~l~~~l~~~~--~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~ 317 (514)
.+.+++.+++.. .+++++|++++++...|.+.+ +++|+++|++||+++|.||+++ +|+.|..+ ..+.+++
T Consensus 215 ~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~--a~e~~gv- 291 (464)
T PRK06938 215 LHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMF--AFEHAGI- 291 (464)
T ss_pred HHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHH--HHHhcCC-
Confidence 456667775432 246899999999999898876 8999999999999999999999 66665422 2234555
Q ss_pred cCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q psy16848 318 HNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAY 394 (514)
Q Consensus 318 ~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 394 (514)
.||++ +++|.+|+ | |++++++++ +.+.... ...+++.+++.++++.++|+.+.++. +.++.+++.++
T Consensus 292 -~PDiv--~~gKglgg-G~PlsAv~~~~~~-~~~~~~~--~~~T~~gnpla~Aaa~a~L~~l~~~~---l~~~~~~~G~~ 361 (464)
T PRK06938 292 -IPDVV--VLSKAIGG-SLPLAVVVYREWL-DTWQPGA--HAGTFRGNQMAMAAGSATLRYIKEHR---LAEHAAAMGER 361 (464)
T ss_pred -CCCEE--EeeccccC-CCceEEEeehhHh-hccCCCC--CCCCCCcCHHHHHHHHHHHHHHHHhH---HHHHHHHHHHH
Confidence 79999 89999986 5 777777764 5443222 22355789999999999999886554 67788888888
Q ss_pred HHHHHHhC--CCcc---ccCCCcEEEEEeCCC--------------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEE
Q psy16848 395 LRNELIQI--GFPV---EHTPSHIIPIKIGNP--------------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIR 455 (514)
Q Consensus 395 l~~~L~~~--g~~~---~~~~~~~~~i~l~~~--------------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iR 455 (514)
+.+.|+++ ..++ +...|.++.+++... .....+...++ ++|+.+.+.. ...+.+|
T Consensus 362 l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~g-----~~~~~l~ 435 (464)
T PRK06938 362 LREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECL-RRGLILELGG-----RHGSVVR 435 (464)
T ss_pred HHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHH-HCCeEEeecC-----CCCCEEE
Confidence 88888775 2332 344677888877421 11345777886 8999986421 1246899
Q ss_pred EEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 456 LAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 456 l~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+.++..+|++|+++++++++++++++
T Consensus 436 ~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 436 FLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred EECCCccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998764
No 163
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.95 E-value=4.3e-25 Score=229.07 Aligned_cols=364 Identities=13% Similarity=0.077 Sum_probs=234.0
Q ss_pred CCceeeecccC---CCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|+.|+||.+. ..+ +||+|.+++.+|+++....... .-..+...++.+++++++. .++++|++||++|+
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~----~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAv 120 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILA----GFSHEPVIELSERLVKITPPGLSRCFYADNGSSAI 120 (466)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcccc----ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHH
Confidence 45555665332 112 3899999999999985432211 1124777889999999863 46788899999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccch
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICPL 166 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~ 166 (514)
+.|++..... .-.+..++++++|.+++.||.. +.+.
T Consensus 121 e~AlKlAr~~----------------------------------------~~~~g~t~r~~ii~~~~~yHG~t~ga~s-- 158 (466)
T PRK07030 121 EVALKMSFHY----------------------------------------WRNRGKPRKKRFVTLTNSYHGETLAAMS-- 158 (466)
T ss_pred HHHHHHHHHH----------------------------------------HHHhCCCCCcEEEEECCCcCcccHHHHh--
Confidence 9999654320 0001223466777787777621 1110
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
.++.. ........+......+|.+..... ..|........++++
T Consensus 159 --------------------------~~~~~---------~~~~~~~p~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~l~ 202 (466)
T PRK07030 159 --------------------------VGDVA---------LFTETYKPLLLDTIKVPSPDCYLR-PEGMSWEEHSRRMFA 202 (466)
T ss_pred --------------------------ccCCc---------cccccCCccCCCCEEcCCCCcccc-ccCCCHHHHHHHHHH
Confidence 00000 000000000000000110000000 001100001123455
Q ss_pred HHHHHHhhccCCCceEEEEec-CCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCc
Q psy16848 247 HLTQVLENMDVKIPKLVAFET-VHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNM 320 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~-~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~ 320 (514)
.+++.+.+ ..+++++|++++ ++...|...+ +++|+++|++||+++|.||+++ +|+.|..+ ..+.+++ .|
T Consensus 203 ~le~~~~~-~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~--a~~~~gv--~P 277 (466)
T PRK07030 203 HMEQTLAE-HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMF--ACEQAGI--RP 277 (466)
T ss_pred HHHHHHHh-CCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccch--HHHhcCC--CC
Confidence 66777763 345789999999 6888898776 8999999999999999999998 77766432 2244555 89
Q ss_pred eEEEcCCcccccCCC----eEEEecHHHHHHHHhhc-----CceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHH
Q psy16848 321 DIISGTLGKAFGNIG----GYIVGTKNFIDTIRSYA-----AGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDI 391 (514)
Q Consensus 321 di~~~S~sK~lg~~G----G~l~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 391 (514)
|++ +++|++++ | |.+++++++.+.+.... .....+++.+++.++++.++|+.+.++. +.++.+++
T Consensus 278 Div--~~gKgl~g-G~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~---l~~~~~~~ 351 (466)
T PRK07030 278 DFL--CLSKALTG-GYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDN---VIENNRAL 351 (466)
T ss_pred CEE--eeehhccC-CcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHH
Confidence 999 89999976 4 77888999888774311 1122355789999999999999987665 77888888
Q ss_pred HHHHHHHHHhC-CCcc---ccCCCcEEEEEeCCCc-----------cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEE
Q psy16848 392 VAYLRNELIQI-GFPV---EHTPSHIIPIKIGNPA-----------LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRL 456 (514)
Q Consensus 392 ~~~l~~~L~~~-g~~~---~~~~~~~~~i~l~~~~-----------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl 456 (514)
.+++++.|+++ ..+. +...|.++.+++.... ....+.+.++ ++|+.+.+. .+.+|+
T Consensus 352 G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~--------g~~i~~ 422 (466)
T PRK07030 352 ARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHAL-ERGALLRPL--------GSVVYF 422 (466)
T ss_pred HHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHH-HCCeEEEec--------CCEEEE
Confidence 99998888776 2222 2345667777774211 1246777886 899998642 247999
Q ss_pred EeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 457 APTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 457 ~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
.++..+|++|+++++++++++++++
T Consensus 423 ~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 423 LPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred ECCccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887
No 164
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=3.5e-25 Score=229.54 Aligned_cols=350 Identities=14% Similarity=0.106 Sum_probs=238.6
Q ss_pred CCceeeecccCCC--C--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEeccccccc
Q psy16848 16 SNRVTCRLSSVQY--K--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAND 89 (514)
Q Consensus 16 ~g~~~~d~~~~~~--~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~~ 89 (514)
+|+.|+||.+..+ + +||+|.+++.+|+++..+.. +.+ ..+...+++++++++++ .++++|++||++|++
T Consensus 70 dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~--~~~---~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve 144 (459)
T PRK06082 70 DGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSP--RRF---TNETAIECAEKLTEIAGGELNRVLFAPGGTSAIG 144 (459)
T ss_pred CCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCcc--Ccc---CCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHH
Confidence 6788888865433 2 38999999999999865432 111 24778899999999985 357888899999999
Q ss_pred cchhhccc-cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 90 STLFTLGK-MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 90 ~~l~~l~~-~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
.|++.... .++...|.....+|.....++...+.....-.. ....|.+ ...+
T Consensus 145 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~-------------~~~~~~~------~~~~-------- 197 (459)
T PRK06082 145 MALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGM-------------GPLMAGV------ERIP-------- 197 (459)
T ss_pred HHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCC-------------CCCCCCC------EEeC--------
Confidence 99976543 335567777888899888777766543211000 0000000 0000
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCC-----
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHN----- 243 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~----- 243 (514)
.++ ....+.+
T Consensus 198 -------------------------------------------------------~~~----------~~~~~~~~~~~~ 212 (459)
T PRK06082 198 -------------------------------------------------------PAV----------SYRGAFPDADGS 212 (459)
T ss_pred -------------------------------------------------------CCc----------ccccccCChhHH
Confidence 000 0000011
Q ss_pred ---ChhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCC
Q psy16848 244 ---DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQ 316 (514)
Q Consensus 244 ---d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~ 316 (514)
..+.+++.+++. +++++|+++++++..+...| +++|+++|++||+++|.||+++ +|+.|..+ ..+.+++
T Consensus 213 ~~~~~~~l~~~i~~~--~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~f--a~e~~gv 288 (459)
T PRK06082 213 DVHYADYLEYVIEKE--GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWF--THQAYGI 288 (459)
T ss_pred HHHHHHHHHHHHhcC--CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh--HhHhhCC
Confidence 124455666532 36899999999987544555 8999999999999999999999 44444321 1244555
Q ss_pred ccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy16848 317 LHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVA 393 (514)
Q Consensus 317 ~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 393 (514)
.+|++ +++|++++.. |.+++++++.+.... .... ++++.+++.++++.++|+.+.++. ..++.+++.+
T Consensus 289 --~PDiv--~~gKgl~gG~~P~~av~~~~~i~~~~~~-~~~~-~T~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~ 359 (459)
T PRK06082 289 --EPDIL--CIGKGLGGGLVPIAAMITKDKYNTAAQI-SLGH-YTHEKSPLGCAAALATIEVIEQEG---LLEKVKADSQ 359 (459)
T ss_pred --CCCEE--EecccccCCCCcceEEEEcHHHHhhccC-CCCC-CCCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHH
Confidence 79999 7999998622 777778776643321 1111 366889999999999999886554 7888899999
Q ss_pred HHHHHHHhC--CCcc---ccCCCcEEEEEeCCC--------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCC
Q psy16848 394 YLRNELIQI--GFPV---EHTPSHIIPIKIGNP--------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTP 460 (514)
Q Consensus 394 ~l~~~L~~~--g~~~---~~~~~~~~~i~l~~~--------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~ 460 (514)
++.+.|+++ ..++ +...|.++.+++... .....+...++ ++|+.+.+. +.+.+|++++.
T Consensus 360 ~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~-------~~~~i~~~Ppl 431 (459)
T PRK06082 360 FMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCL-NNGLSFKVS-------QGNVIQLSPPL 431 (459)
T ss_pred HHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHH-hCCCEEEec-------CCCEEEEeCCC
Confidence 999888775 3333 344677888877421 11346777786 899998642 24689999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCC
Q psy16848 461 FHTREMIDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 461 ~~t~e~id~~~~~l~~~l~~~~~ 483 (514)
.+|++|++++++++++++.++.+
T Consensus 432 ~it~~eid~~~~~l~~~l~~~~~ 454 (459)
T PRK06082 432 IITREELTQALAILEEAIAKICQ 454 (459)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999987643
No 165
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=3.2e-25 Score=231.25 Aligned_cols=232 Identities=13% Similarity=0.052 Sum_probs=167.6
Q ss_pred hhHHHHHHhhc--cCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccC----
Q psy16848 245 VNHLTQVLENM--DVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERD---- 314 (514)
Q Consensus 245 ~~~l~~~l~~~--~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~---- 314 (514)
.+.+++.+++. ...+++++++++|+||||.+++ +++|.++|++|++++|+||+|....+ +....++....
T Consensus 175 ~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~ 254 (468)
T PLN02450 175 ESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRK 254 (468)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcc
Confidence 34455555432 2346889999999999999999 78899999999999999999994332 22221221111
Q ss_pred --CC-ccCceEEEcCCcccccCCC---eEEEecHH-HHHHHHhhcCceEeccCCcHHHHHHHHHHHHHh--hhchHHHHH
Q psy16848 315 --GQ-LHNMDIISGTLGKAFGNIG---GYIVGTKN-FIDTIRSYAAGFIFTTSLPPTVLAGAREAIRIL--SSQEGVELR 385 (514)
Q Consensus 315 --~~-~~~~di~~~S~sK~lg~~G---G~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~ 385 (514)
+. ..+..+++.||||.++.+| ||++++++ +++.+.... .+ . ..+.+.+.++...|+.. ....+++.+
T Consensus 255 ~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~-~~--~-~~s~~~Q~a~~~~L~~~~~~~~~l~~~~ 330 (468)
T PLN02450 255 LENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMS-SF--G-LVSSQTQYLLSALLSDKKFTKNYLEENQ 330 (468)
T ss_pred cccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHh-hc--C-CCCHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 00 2357899999999999778 99999855 556555442 21 1 35777888888877632 123567788
Q ss_pred HHHHHHHHHHHHHHHhCCCccccCCCc-EEEEEeCCCc------cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEe
Q psy16848 386 AKHQDIVAYLRNELIQIGFPVEHTPSH-IIPIKIGNPA------LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAP 458 (514)
Q Consensus 386 ~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~i~l~~~~------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~ 458 (514)
++++++++.+.+.|++.|+++..+.++ ++++.++... ...++...+++++||.+.||..+.. ...+++|+++
T Consensus 331 ~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~-~~~g~~Rl~f 409 (468)
T PLN02450 331 KRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHC-TEPGWFRVCF 409 (468)
T ss_pred HHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCC-CCCCEEEEEe
Confidence 999999999999999999887777666 7778876321 1245777777678999999987543 3467999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 459 TPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 459 ~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
+. .+++++++++++|++++++..
T Consensus 410 ~~-~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 410 AN-MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred cC-CCHHHHHHHHHHHHHHHHhcc
Confidence 83 568999999999999987653
No 166
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.95 E-value=4.4e-25 Score=221.59 Aligned_cols=327 Identities=20% Similarity=0.180 Sum_probs=217.6
Q ss_pred cCCceeeecccC---CCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccc
Q psy16848 15 KSNRVTCRLSSV---QYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVAND 89 (514)
Q Consensus 15 ~~g~~~~d~~~~---~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~ 89 (514)
.+|++++||.+. .-+ +||++.+++.+|+++.... ++.+ ..+...+++++++++.+.++++|++|||+|++
T Consensus 21 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~--~~~~---~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e 95 (364)
T PRK04013 21 SQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVA--GPMF---EHEEKEEMLEELSKWVNYEYVYMGNSGTEAVE 95 (364)
T ss_pred CCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCc--cCCc---CCHHHHHHHHHHHhhcCCCEEEEeCchHHHHH
Confidence 367777777543 222 3799999999999984322 1111 24677899999999988889999999999999
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccchh
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICPLK 167 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 167 (514)
.+++..... ++++++|.+++.||.. +.+.
T Consensus 96 ~Alklar~~----------------------------------------------~gr~~Ii~~~~syHG~t~~~ls--- 126 (364)
T PRK04013 96 AALKFARLY----------------------------------------------TGRKEIIAMTNAFHGRTMGALS--- 126 (364)
T ss_pred HHHHHHHHH----------------------------------------------hCCCEEEEECCccccCchhhcc---
Confidence 999765431 1233444444444311 0000
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH 247 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~ 247 (514)
..+. ..+...+...-..+..++.+|.+.
T Consensus 127 -------------------------~~~~---------------------------~~~~~~~~p~~~~~~~~~~~d~~~ 154 (364)
T PRK04013 127 -------------------------ATWK---------------------------PKYREDFEPLVPGFKHIPFNDVEA 154 (364)
T ss_pred -------------------------CCCC---------------------------cccccCCCCCCCCcEEecCCCHHH
Confidence 0000 000000000011245566677777
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEE
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDII 323 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~ 323 (514)
+++.+. +++++|++++.+...|...+ +++|+++|++||+++|+||+++-...|..+ ....+++ .+|++
T Consensus 155 l~~~i~----~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~--a~~~~gv--~PDiv 226 (364)
T PRK04013 155 AKEAIT----KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFL--AIEHYKV--EPDIV 226 (364)
T ss_pred HHHHhc----CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchh--HHHhcCC--CCCEE
Confidence 776664 46899999999998888765 899999999999999999999921444322 1233444 79999
Q ss_pred EcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy16848 324 SGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELI 400 (514)
Q Consensus 324 ~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 400 (514)
+++|.+++ | |.++.++++ .... ...+++.+++.++++.++|+.+.+++ +.++.++. +. .+.
T Consensus 227 --~~gK~lgg-G~P~~a~~~~~~~----~~~~--~~~T~~gnp~~~aaa~a~l~~i~~~~---l~~~~~~~---l~-~l~ 290 (364)
T PRK04013 227 --TMGKGIGN-GVPVSLTLTNFDV----ERGK--HGSTFGGNPLACKAVAVTLRILRRER---LVEKAGEK---FI-EIK 290 (364)
T ss_pred --EecccccC-CceeEEEEecccc----cCCC--cCCCCCcCHHHHHHHHHHHHHHHhcc---HHHHHHHH---HH-Hhc
Confidence 89999987 5 666666554 1222 22356889999999999999997666 33444332 21 222
Q ss_pred hCCCccccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 401 QIGFPVEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 401 ~~g~~~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
.--+.-+...|.++.+++... ...+.+.++ ++|+.+.+ .+.+.+|+.++..+|++|++++++++++++++
T Consensus 291 ~~~v~~vRG~Gl~~gve~~~~--~~~i~~~~~-~~Gll~~~-------~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 291 GERVVTTRGRGLMIGIVLKKP--VGKYVEELQ-NRGYLVHT-------AGQRVIRLLPPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred cCcceeeeeCcEEEEEEeCCc--HHHHHHHHH-hCCcEEee-------CCCCEEEEeCCcccCHHHHHHHHHHHHHHHHH
Confidence 111122345677888888643 567888886 89999863 23468999999999999999999999999876
Q ss_pred c
Q psy16848 481 L 481 (514)
Q Consensus 481 ~ 481 (514)
+
T Consensus 361 ~ 361 (364)
T PRK04013 361 I 361 (364)
T ss_pred H
Confidence 3
No 167
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.94 E-value=3e-25 Score=227.85 Aligned_cols=354 Identities=17% Similarity=0.157 Sum_probs=239.1
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|+.|+|+.+. ..++ ||++.+++.+|+++....... .-..+...++.+++++++. .++++|++||++|+
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~----~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAv 116 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFG----GITHPPAIELCRKLVAMTPQPLECVFLADSGSVAV 116 (428)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcccc----ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHH
Confidence 56667777432 2333 799999999999985432111 1134677889999999874 35788899999999
Q ss_pred ccchhhccc------cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCC
Q psy16848 89 DSTLFTLGK------MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGA 162 (514)
Q Consensus 89 ~~~l~~l~~------~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (514)
+.|++.... .++...|.....+|..+..++..++.....-.. .....+..+.
T Consensus 117 e~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~------------~~~~~~~~~~---------- 174 (428)
T PRK07986 117 EVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSL------------YKGYLPENLF---------- 174 (428)
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhc------------cCCCCCCCEE----------
Confidence 999986542 123456777777888777666554421100000 0000000000
Q ss_pred ccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC
Q psy16848 163 ICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH 242 (514)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~ 242 (514)
++.++.. .+ ..++.
T Consensus 175 -----------------------------------------------------------~~~p~~~----~~---~~~~~ 188 (428)
T PRK07986 175 -----------------------------------------------------------APAPQSR----FD---GEWDE 188 (428)
T ss_pred -----------------------------------------------------------ECCCCcc----cc---hhhHH
Confidence 0000000 00 00123
Q ss_pred CChhHHHHHHhhccCCCceEEEEecC-CCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCc-cccCCC
Q psy16848 243 NDVNHLTQVLENMDVKIPKLVAFETV-HSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGI-GERDGQ 316 (514)
Q Consensus 243 ~d~~~l~~~l~~~~~~~~~~vv~~~~-~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~-~~~~~~ 316 (514)
+|++.+++.+++. .+++.+|+++++ +...|...+ +++|+++|++||+++|+||+++ |+ |+.|.++ .+..++
T Consensus 189 ~d~~~l~~~l~~~-~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~t-G~-GrtG~~fa~~~~gv 265 (428)
T PRK07986 189 RDIAPFARLMAAH-RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIAT-GF-GRTGKLFACEHAGI 265 (428)
T ss_pred HHHHHHHHHHHhC-CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-CC-ccCCCeeeecccCC
Confidence 4667777777643 346889999996 777787554 8999999999999999999996 43 5555443 244554
Q ss_pred ccCceEEEcCCcccccC---CCeEEEecHHHHHHHHhhcC---ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHH
Q psy16848 317 LHNMDIISGTLGKAFGN---IGGYIVGTKNFIDTIRSYAA---GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQD 390 (514)
Q Consensus 317 ~~~~di~~~S~sK~lg~---~GG~l~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 390 (514)
.+|++ +++|++++ +.|.+++++++.+.+..... ....+++.+++.++++.++|+.+.++. .+++.++
T Consensus 266 --~PDi~--t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~---~~~~~~~ 338 (428)
T PRK07986 266 --APDIL--CLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGD---WQQQVAA 338 (428)
T ss_pred --CCCEE--EechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHH
Confidence 78999 79999964 11566788898888865321 122355789999999999999886655 6888888
Q ss_pred HHHHHHHHHHhC-CCcc---ccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHH
Q psy16848 391 IVAYLRNELIQI-GFPV---EHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREM 466 (514)
Q Consensus 391 ~~~~l~~~L~~~-g~~~---~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~ 466 (514)
+.+++.+.|+++ ..+. +...|.++.+.+.+......+.+.++ ++|+++.+. .+.+|+.++..+|++|
T Consensus 339 ~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~~~~~~~~~l~-~~Gl~~~~~--------g~~i~~~Ppl~it~~e 409 (428)
T PRK07986 339 IEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPVNMAALQRFFV-EQGVWIRPF--------GKLIYLMPPYIILPEQ 409 (428)
T ss_pred HHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcccHHHHHHHHH-HCCcEEEec--------CCEEEEeCCCCCCHHH
Confidence 899998888875 3332 23456788888865444667888886 999998642 2489999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy16848 467 IDKFVTDLLAVWKS 480 (514)
Q Consensus 467 id~~~~~l~~~l~~ 480 (514)
++++++++++++++
T Consensus 410 i~~~~~~l~~~l~~ 423 (428)
T PRK07986 410 LQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999865
No 168
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=8e-25 Score=221.29 Aligned_cols=322 Identities=16% Similarity=0.152 Sum_probs=223.1
Q ss_pred eeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-cEEEEeccc-cccccchhh
Q psy16848 19 VTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-AGLVFTSCY-VANDSTLFT 94 (514)
Q Consensus 19 ~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~i~~~sGt-~a~~~~l~~ 94 (514)
..+||..+. +..++.+.+++.+.+... .. |.... ..++++.++++++.+ +.+++++|+ +++..++.+
T Consensus 20 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~-~~-------Y~~~~-~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~ 90 (354)
T PRK06358 20 MILDFSANINPLGVPESLKQAITENLDKL-VE-------YPDPD-YLELRKRIASFEQLDLENVILGNGATELIFNIVKV 90 (354)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHhh-hc-------CCCcc-HHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH
Confidence 468886543 223678888888776431 11 11122 468889999998753 345555555 555556555
Q ss_pred ccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhh
Q psy16848 95 LGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSH 174 (514)
Q Consensus 95 l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (514)
+ . + +.|+++.+.|......++..|.+++.++...
T Consensus 91 ~-~--~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~------------------------------------------ 124 (354)
T PRK06358 91 T-K--P-KKVLILAPTFAEYERALKAFDAEIEYAELTE------------------------------------------ 124 (354)
T ss_pred h-C--C-CcEEEecCChHHHHHHHHHcCCeeEEEeCcc------------------------------------------
Confidence 4 2 4 5788899988887766666666655443210
Q ss_pred hcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhh
Q psy16848 175 QHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLEN 254 (514)
Q Consensus 175 ~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~ 254 (514)
..++..+++.++.
T Consensus 125 -------------------------------------------------------------------~~~~~~d~~~~~~ 137 (354)
T PRK06358 125 -------------------------------------------------------------------ETNFAANEIVLEE 137 (354)
T ss_pred -------------------------------------------------------------------ccCCCccHHHHHh
Confidence 0011111122222
Q ss_pred ccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccc
Q psy16848 255 MDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 255 ~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l 331 (514)
. .++++++++++|+||||.+++ +++|.++|+++++++|+||+|..........+...... ..+..++++||||.+
T Consensus 138 ~-~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~ 215 (354)
T PRK06358 138 I-KEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLE-NFKNLIIIRAFTKFF 215 (354)
T ss_pred h-ccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhcc-CCCCEEEEEechhhc
Confidence 2 335788889999999999999 78999999999999999999984433221111111111 235689999999999
Q ss_pred cCCC---eEEEec-HHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcc
Q psy16848 332 GNIG---GYIVGT-KNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPV 406 (514)
Q Consensus 332 g~~G---G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 406 (514)
|.+| ||++++ +.+++.+......+ +.+.+.+.++..+++. ...+.+.++.++++++++.+.|++. ++.+
T Consensus 216 gl~G~RiG~lv~~~~~~~~~~~~~~~~~----~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 289 (354)
T PRK06358 216 AIPGLRLGYGLTSNKNLAEKLLQMREPW----SINTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIKV 289 (354)
T ss_pred cCcchhheeeecCCHHHHHHHHHhCCCC----cchHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9768 999874 67888887665433 5677777787777752 2345677888899999999999887 7766
Q ss_pred ccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 407 EHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 407 ~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
..+.++++++++++ ..++++.|+ ++||.+.++..+. ..+.+++|++++ ++++.++++++|++++
T Consensus 290 ~~~~g~f~~~~~~~---~~~~~~~l~-~~gI~v~~~~~f~-~~~~~~iRls~~---~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 290 YKPSVNFIFFKLEK---PIDLRKELL-KKGILIRSCSNYR-GLDENYYRVAVK---SREDNKKLLKALEVIL 353 (354)
T ss_pred cCCcceEEEEEcCc---hHHHHHHHH-HCCeEEEECCCCC-CCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 67778888888875 368999996 8999999998642 234679999998 8999999999998864
No 169
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.94 E-value=6.4e-25 Score=225.96 Aligned_cols=214 Identities=20% Similarity=0.156 Sum_probs=154.5
Q ss_pred CCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCC-CCCccccCCCccCceEEEcCCcccccC
Q psy16848 258 KIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEH-GAGIGERDGQLHNMDIISGTLGKAFGN 333 (514)
Q Consensus 258 ~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~-~~~~~~~~~~~~~~di~~~S~sK~lg~ 333 (514)
++++++++++||||||.+++ +++|.++|++|++++|+||+|.....+.. ..++..... ..+..++++||||.+|.
T Consensus 172 ~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~-~~~~vi~~~SfSK~~g~ 250 (402)
T TIGR03542 172 PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPG-AKECAIEFRSFSKTAGF 250 (402)
T ss_pred CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCC-CcccEEEEecCccccCC
Confidence 45789999999999999999 79999999999999999999995433221 111111111 12457889999999987
Q ss_pred CC---eEEEecHHHH--------HHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 334 IG---GYIVGTKNFI--------DTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 334 ~G---G~l~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
+| ||++++++++ +.+....... ..+.+.+.+.++...++........+.++.++++++.+.+.|++.
T Consensus 251 pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 328 (402)
T TIGR03542 251 TGVRLGWTVVPKELTYADGHSVIQDWERRQCTK--FNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA 328 (402)
T ss_pred CCcceEEEEecHHHhhcchhhHHHHHHHHhhhc--ccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78 9999998876 2221111111 114566777776666652211234556777888999999999988
Q ss_pred CCccccC-CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 403 GFPVEHT-PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 403 g~~~~~~-~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
++.+..+ .+.+++++++...+..++.+.++++.||.+.++..+. ..+.+++|+++. .+++++++++++|+++
T Consensus 329 ~~~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~-~~~~~~iRis~~--~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 329 GFKVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFG-PSGEGFVRFSAF--GKRENIVEACERIKEA 401 (402)
T ss_pred CceecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCEEEEEec--CCHHHHHHHHHHHHhh
Confidence 8776655 4558889988755677899998767899999988643 334679999976 3789999999999875
No 170
>PRK07481 hypothetical protein; Provisional
Probab=99.94 E-value=8.9e-25 Score=226.34 Aligned_cols=354 Identities=17% Similarity=0.145 Sum_probs=234.9
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC---CCcEEEEeccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ---KEAGLVFTSCYVA 87 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~i~~~sGt~a 87 (514)
+|++|+||.+. ..++ ||++.+++.+++++...... ......+...++.++++++++ .++++|++||++|
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~---~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEA 116 (449)
T PRK07481 40 DGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYST---FDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDS 116 (449)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceec---ccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHH
Confidence 56666666432 2233 79999999999998443211 111134777889999999873 4678889999999
Q ss_pred cccchhhcccc-------CCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc
Q psy16848 88 NDSTLFTLGKM-------IPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT 160 (514)
Q Consensus 88 ~~~~l~~l~~~-------~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 160 (514)
++.|++..... ++...|.....+|.....++...+..... .. .....+.+ .+
T Consensus 117 ve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~--~~-----------~~~~~~g~------~~-- 175 (449)
T PRK07481 117 VETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFR--RN-----------YEPLLPGC------FH-- 175 (449)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccc--cc-----------cCCCCCCC------EE--
Confidence 99999865421 23446677777888777666554432110 00 00000000 00
Q ss_pred CCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEe
Q psy16848 161 GAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIY 240 (514)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v 240 (514)
++.++ ...+
T Consensus 176 -------------------------------------------------------------~~~~~----------~~~~ 184 (449)
T PRK07481 176 -------------------------------------------------------------VETPW----------LYRN 184 (449)
T ss_pred -------------------------------------------------------------eCCCc----------cccc
Confidence 00000 0001
Q ss_pred cCC--Chh--------HHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCC
Q psy16848 241 RHN--DVN--------HLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGE 305 (514)
Q Consensus 241 ~~~--d~~--------~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~ 305 (514)
+.+ |.+ .+++.+.....+++++|++++++...|...+ +++|+++|++||+++|.||+++ +|+.|.
T Consensus 185 ~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~ 264 (449)
T PRK07481 185 PFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGS 264 (449)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCch
Confidence 111 222 2333343223467999999999999998776 8999999999999999999999 666554
Q ss_pred CCCCccccCCCccCceEEEcCCcccccCC---CeEEEecHHHHHHHHhhcC-----ceEeccCCcHHHHHHHHHHHHHhh
Q psy16848 306 HGAGIGERDGQLHNMDIISGTLGKAFGNI---GGYIVGTKNFIDTIRSYAA-----GFIFTTSLPPTVLAGAREAIRILS 377 (514)
Q Consensus 306 ~~~~~~~~~~~~~~~di~~~S~sK~lg~~---GG~l~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~a~~~~l~~~~ 377 (514)
.+ ..+.+++ .||++ +++|++++. -|.+++++++.+.+..... ....+.+.+++.++++.++|+.+.
T Consensus 265 ~~--a~~~~gv--~PDiv--~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~ 338 (449)
T PRK07481 265 WF--GSRGWGV--KPDIM--CLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVV 338 (449)
T ss_pred hh--HhhhcCC--CCCEE--EEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 22 1234444 79999 899999761 2778889888887754211 122355789999999999999886
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHhC--CCcc---ccCCCcEEEEEeCCC-----------ccHHHHHHHHHHhCCeEEec
Q psy16848 378 SQEGVELRAKHQDIVAYLRNELIQI--GFPV---EHTPSHIIPIKIGNP-----------ALNTKICDMLLKEKGHYVQP 441 (514)
Q Consensus 378 ~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~---~~~~~~~~~i~l~~~-----------~~~~~~~~~Ll~~~GI~v~~ 441 (514)
++. ..++.+++.+++.+.|+++ ..++ +...|.++.+++... .....+...++ ++||++.+
T Consensus 339 ~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~ 414 (449)
T PRK07481 339 RED---LPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVAR-ENGVLVRP 414 (449)
T ss_pred hhh---HHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHH-hCCeEEEe
Confidence 554 7778888888888888775 3333 344667888877321 12346777785 89999864
Q ss_pred ccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 442 INYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 442 ~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
. .+.+|++++..+|++|+|+++++++++++++.
T Consensus 415 ~--------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 415 S--------GTKIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred c--------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 2 13589999999999999999999999998753
No 171
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.94 E-value=7.9e-25 Score=226.68 Aligned_cols=205 Identities=19% Similarity=0.207 Sum_probs=154.6
Q ss_pred CCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCceEEEcCCccccc
Q psy16848 258 KIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG 332 (514)
Q Consensus 258 ~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg 332 (514)
+++++++++++++..|.+.+ +++|+++|++||+++|.||+++ +|+.|..+ ..+..++ .+|++ +++|+++
T Consensus 205 ~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~--a~~~~gv--~PDiv--~~gK~l~ 278 (442)
T TIGR00709 205 DKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMF--AFEHAGI--EPDFV--VMSKAVG 278 (442)
T ss_pred CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchh--HHHHcCC--CCcEE--EEccccc
Confidence 46899999999998888755 8999999999999999999999 66665422 1223444 78999 6999998
Q ss_pred CCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--CCcc-
Q psy16848 333 NIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI--GFPV- 406 (514)
Q Consensus 333 ~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~- 406 (514)
+ | |+++++++ .+.+.... ...+++.+++.++++.++|+.+.++. +.++.+++.+++.+.|+++ ..+.
T Consensus 279 ~-G~Pigav~~~~~-~~~~~~~~--~~~T~~gnpla~aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v 351 (442)
T TIGR00709 279 G-GLPLAVLLIAPE-FDAWQPAG--HTGTFRGNQLAMVTGTEALNYWKDDN---LAQNAQERGERITSFLDDMIKEHPCI 351 (442)
T ss_pred C-CcccEEEEEchH-HhccCCCc--CCCCCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 7 6 88888877 44443222 22355789999999999999886655 6778888888888888765 3332
Q ss_pred --ccCCCcEEEEEeCCCc--------------cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHH
Q psy16848 407 --EHTPSHIIPIKIGNPA--------------LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKF 470 (514)
Q Consensus 407 --~~~~~~~~~i~l~~~~--------------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~ 470 (514)
+...|.++.+++.+.. ....+...++ ++|+.+.+.. ...+.+|+.++..+|++|++++
T Consensus 352 ~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~-----~~~~~l~~~Ppl~it~~ei~~~ 425 (442)
T TIGR00709 352 GNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACF-ENGLLLETGG-----REGEVFRLLCPITIDQEECEEG 425 (442)
T ss_pred eeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHH-HCCeEEeecC-----CCCCEEEEECCCCCCHHHHHHH
Confidence 2446778888774321 1345677775 8999986421 1246899999999999999999
Q ss_pred HHHHHHHHHHc
Q psy16848 471 VTDLLAVWKSL 481 (514)
Q Consensus 471 ~~~l~~~l~~~ 481 (514)
+++++++++++
T Consensus 426 ~~~l~~~l~~~ 436 (442)
T TIGR00709 426 ISRFKQAVEEA 436 (442)
T ss_pred HHHHHHHHHHH
Confidence 99999988764
No 172
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.6e-24 Score=223.05 Aligned_cols=217 Identities=21% Similarity=0.238 Sum_probs=161.2
Q ss_pred CCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCccCceEEEcCCccccc
Q psy16848 257 VKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLHNMDIISGTLGKAFG 332 (514)
Q Consensus 257 ~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~~di~~~S~sK~lg 332 (514)
+++++++++++|+||||.+++ +++|.++|+++|+++|+|++|..... +....++....+ ..+..+++.||||.+|
T Consensus 160 ~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~-~~~~~i~~~S~SK~~~ 238 (397)
T PRK07568 160 TPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEG-LEDRVIIIDSVSKRYS 238 (397)
T ss_pred CccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCC-CcCCEEEEecchhhcc
Confidence 456889999999999999998 78999999999999999999984332 222222222221 1356799999999998
Q ss_pred CCC---eEEEec-HHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc
Q psy16848 333 NIG---GYIVGT-KNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE 407 (514)
Q Consensus 333 ~~G---G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 407 (514)
.+| ||++++ +++++.+...... ..+.+.+.+.++..+++.. +.+++++++.++++++.+.+.|++. ++.+.
T Consensus 239 ~~G~R~G~~~~~~~~~~~~~~~~~~~---~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (397)
T PRK07568 239 ACGARIGCLISKNKELIAAAMKLCQA---RLSPPTLEQIGAAALLDTP-ESYFDEVREEYKKRRDILYEELNKIPGVVCE 314 (397)
T ss_pred CCCcceEEEecCCHHHHHHHHHHhhc---cCCCCcHHHHHHHHHhhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 767 999874 6788776554322 2256777777777777642 4567778889999999999999887 66666
Q ss_pred cCCCc-EEEEEeCCCccHHHHHHHHHHh-----CCeEEecccCCCCC--CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 408 HTPSH-IIPIKIGNPALNTKICDMLLKE-----KGHYVQPINYPTVP--VGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 408 ~~~~~-~~~i~l~~~~~~~~~~~~Ll~~-----~GI~v~~~~~~~~~--~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
.+.++ +++++++.. +..++++.++++ +||.+.|+..+... .+.+++|++++ .+++++++++++|+++++
T Consensus 315 ~p~g~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~~~~~~~~~~~l~~~l~ 391 (397)
T PRK07568 315 KPKGAFYIIAKLPVD-DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LNEEDLKRAMEILKEALE 391 (397)
T ss_pred CCCcceEEEEecCCC-CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CCHHHHHHHHHHHHHHHH
Confidence 66665 456777653 467888888643 69999998864322 23579999997 468999999999999887
Q ss_pred Hc
Q psy16848 480 SL 481 (514)
Q Consensus 480 ~~ 481 (514)
+.
T Consensus 392 ~~ 393 (397)
T PRK07568 392 KY 393 (397)
T ss_pred Hh
Confidence 65
No 173
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.94 E-value=7.4e-25 Score=226.43 Aligned_cols=202 Identities=25% Similarity=0.308 Sum_probs=153.9
Q ss_pred CCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCc-cccCCCccCceEEEcCCccc
Q psy16848 257 VKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGI-GERDGQLHNMDIISGTLGKA 330 (514)
Q Consensus 257 ~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~-~~~~~~~~~~di~~~S~sK~ 330 (514)
.+++++|+++++++..|...+ +++|.++|++||+++|+||+++ +|..| ..+ ...+++ .+|++ +++|.
T Consensus 219 ~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G---~~~a~~~~gv--~pDiv--t~~K~ 291 (441)
T PRK05769 219 PEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTG---KMFAIEHFGV--EPDII--TLAKA 291 (441)
T ss_pred CCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---ceehhhccCC--CCCEE--EEccc
Confidence 457899999999999999888 9999999999999999999999 44443 222 233444 68998 78999
Q ss_pred ccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--CCc
Q psy16848 331 FGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI--GFP 405 (514)
Q Consensus 331 lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~ 405 (514)
++. | |++++++++.+.. ..... .+++.+++.++++.++|+.+.+ +..++.+++.+++++.|+++ ..+
T Consensus 292 l~~-G~p~gav~~~~~i~~~~-~~~~~--~T~~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~ 363 (441)
T PRK05769 292 IAG-GLPLGAVIGRAELMFLP-PGSHA--NTFGGNPVAAAAALATLEELEE----GLLENAQKLGEYLRKELKELKEKYE 363 (441)
T ss_pred ccC-CcccEEEEEehhhhhcC-CCCCC--CCCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 985 4 8888888877533 22222 2446789999999999998854 47888889999999888775 233
Q ss_pred cc---cCCCcEEEEEeCCC------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 406 VE---HTPSHIIPIKIGNP------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 406 ~~---~~~~~~~~i~l~~~------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
++ ...|.++.+.+.+. .....+.+.++ ++||.+.+ .+.+.+|++++..+|++|++++++++++
T Consensus 364 ~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~Gil~~~-------~~~~~lr~~p~l~~t~~~id~~~~~l~~ 435 (441)
T PRK05769 364 FIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAF-KRGLLLLG-------AGKSAIRIIPPLIITEEEADIGLEILEE 435 (441)
T ss_pred CeeeeecceEEEEEEeccCCccccHHHHHHHHHHHH-hCCcEEec-------CCCCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 32 33566777777432 23456777886 89999863 2346899999999999999999999999
Q ss_pred HHHHc
Q psy16848 477 VWKSL 481 (514)
Q Consensus 477 ~l~~~ 481 (514)
+++++
T Consensus 436 ~l~~~ 440 (441)
T PRK05769 436 AIKEL 440 (441)
T ss_pred HHHHh
Confidence 98753
No 174
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=6.8e-25 Score=223.74 Aligned_cols=321 Identities=16% Similarity=0.093 Sum_probs=224.8
Q ss_pred CceeeecccC--CCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-cEEEEeccc-cccccch
Q psy16848 17 NRVTCRLSSV--QYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-AGLVFTSCY-VANDSTL 92 (514)
Q Consensus 17 g~~~~d~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~i~~~sGt-~a~~~~l 92 (514)
+..++|+..+ .+..+|.+.+++.+. .. .. . |+. ....++++.++++++.+ +.+++++|+ +++..++
T Consensus 51 ~~~~i~l~~n~~p~~~~~~v~~a~~~~-~~----~~--~--Yp~-~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~ 120 (380)
T PLN03026 51 PEDIVKLDANENPYGPPPEVLEALGNM-KF----PY--V--YPD-PESRRLRAALAEDSGLESENILVGCGADELIDLLM 120 (380)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHhh-Hh----hc--c--CCC-CCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHH
Confidence 4567888654 344567777776542 11 00 1 111 12578999999999854 346666665 4666666
Q ss_pred hhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhh
Q psy16848 93 FTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEV 172 (514)
Q Consensus 93 ~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (514)
.++.. +||.|+++.+.|......++..|.+++.++..+.
T Consensus 121 ~~~~~--~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~--------------------------------------- 159 (380)
T PLN03026 121 RCVLD--PGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPD--------------------------------------- 159 (380)
T ss_pred HHhcC--CCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCC---------------------------------------
Confidence 66655 9999999999887655555555555544322100
Q ss_pred hhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHH
Q psy16848 173 SHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVL 252 (514)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l 252 (514)
. ..|.+.+++.+
T Consensus 160 -----------------------~---------------------------------------------~~d~~~l~~~~ 171 (380)
T PLN03026 160 -----------------------F---------------------------------------------SLDVPRIVEAV 171 (380)
T ss_pred -----------------------C---------------------------------------------CcCHHHHHHHH
Confidence 0 01333343333
Q ss_pred hhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc
Q psy16848 253 ENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG 332 (514)
Q Consensus 253 ~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg 332 (514)
+ +++++++++++|+||||.+++.+++.++++.. +++|+||+|........ ...... ..+.+++++||||.+|
T Consensus 172 ~---~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~---~~~~~~-~~~~viv~~SfSK~~g 243 (380)
T PLN03026 172 E---THKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQES---RMKWVK-KYDNLIVLRTFSKRAG 243 (380)
T ss_pred h---ccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcc---hHHHHH-hCCCEEEEecchHhhc
Confidence 2 34689999999999999999999999999865 99999999983322111 111111 2357899999999999
Q ss_pred CCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCC-Ccccc
Q psy16848 333 NIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIG-FPVEH 408 (514)
Q Consensus 333 ~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~ 408 (514)
.+| ||+++++++++.+......+ +.+.+.+.++.++|+. .+.+++.++.++++++++.+.|++++ +.+.+
T Consensus 244 laGlRiGy~~~~~~~i~~l~~~~~~~----~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p 317 (380)
T PLN03026 244 LAGLRVGYGAFPLSIIEYLWRAKQPY----NVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEPYP 317 (380)
T ss_pred CccccceeeecCHHHHHHHHHhcCCC----CCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECC
Confidence 878 99999999999887766543 5677778888888863 34567788889999999999999885 44445
Q ss_pred CCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 409 TPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 409 ~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
+.++++++.++...+..++.+.|+ ++||.++++.. ...++++|++++ +.+++++++++|+++
T Consensus 318 ~~~~f~~~~~~~~~~~~~~~~~l~-~~gI~v~~~~~---~~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 318 SDANFILCRVTSGRDAKKLKEDLA-KMGVMVRHYNS---KELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHH-HCCeEEEECCC---CCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 667788888875455788999996 89999987643 234579999998 788999999998764
No 175
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=6e-25 Score=223.49 Aligned_cols=228 Identities=19% Similarity=0.271 Sum_probs=174.8
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEE
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDII 323 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~ 323 (514)
|++.+++.+.+ +++.+++.+.+|. |...|+++|+++|+++|+++++|++|+.|..+... .........++|++
T Consensus 208 D~d~l~~~~~~----~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~--~~~~~~~~~~~D~v 280 (493)
T PRK13580 208 DYDEIAALARE----FKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKV--FTGDEDPVPHADIV 280 (493)
T ss_pred CHHHHHHHHhh----cCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceecccc--chhhcCCCCCCcEE
Confidence 55666666543 4677888888877 55789999999999999999999999998876221 11111112368999
Q ss_pred EcCCcccc-cCCCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 324 SGTLGKAF-GNIGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 324 ~~S~sK~l-g~~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
++|+||++ |+.||++++++++++.+... .++.+++..++..++++. ++.....+...+.++++.++.++|.+.|.+.
T Consensus 281 tgT~hKaL~GP~GG~I~~~~~l~~~L~~a-~P~i~gg~l~p~iAA~av-Al~e~~~~ef~~y~~~l~~Na~~La~~L~~~ 358 (493)
T PRK13580 281 TTTTHKTLRGPRGGLVLAKKEYADAVDKG-CPLVLGGPLPHVMAAKAV-ALAEARTPEFQKYAQQVVDNARALAEGFLKR 358 (493)
T ss_pred EeCChhhccCCCeEEEEecHHHHHHHhhC-CCcccCCCccHHHHHHHH-HHHHHhCccHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999 77789999999999888544 356666666665555555 4554444445678999999999999999999
Q ss_pred CCccc--cCCCcEEEEEeCCCccHH-HHHHHHHHhCCeEEecccCCCCCCC---CcEEEEEeCC----CCCHHHHHHHHH
Q psy16848 403 GFPVE--HTPSHIIPIKIGNPALNT-KICDMLLKEKGHYVQPINYPTVPVG---EEKIRLAPTP----FHTREMIDKFVT 472 (514)
Q Consensus 403 g~~~~--~~~~~~~~i~l~~~~~~~-~~~~~Ll~~~GI~v~~~~~~~~~~~---~~~iRl~~~~----~~t~e~id~~~~ 472 (514)
|+++. .+.++++.+.+++..... .+.+.| .+.||.+.+...|+.+.+ ...||++++. .++++|++++++
T Consensus 359 G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L-~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad 437 (493)
T PRK13580 359 GARLVTGGTDNHLVLIDVTSFGLTGRQAESAL-LDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAE 437 (493)
T ss_pred CCCccCCCCCCCEEEEEeCCHHHHHHHHHHHH-HHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHH
Confidence 99876 356789999887654333 555577 599999999888888877 7899999886 567999999999
Q ss_pred HHHHHHHHc
Q psy16848 473 DLLAVWKSL 481 (514)
Q Consensus 473 ~l~~~l~~~ 481 (514)
.|.++++..
T Consensus 438 ~l~~~l~~~ 446 (493)
T PRK13580 438 LIVKVLSNT 446 (493)
T ss_pred HHHHHHHhh
Confidence 999988754
No 176
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=5.1e-25 Score=223.10 Aligned_cols=321 Identities=16% Similarity=0.089 Sum_probs=224.1
Q ss_pred ceeeecccCC-CC-CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC--cEEEEeccccccccchh
Q psy16848 18 RVTCRLSSVQ-YK-VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE--AGLVFTSCYVANDSTLF 93 (514)
Q Consensus 18 ~~~~d~~~~~-~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~~i~~~sGt~a~~~~l~ 93 (514)
...+|++.+. .+ .+|.+.+++.+.+...-.. |+.. ...++++.++++++.+ +.++++++++++..++.
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~-------y~~~-~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~ 95 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDLRL-------YPDP-NADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFL 95 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhhhc-------CCCC-cHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHH
Confidence 4568886533 23 4678888888877641111 1111 2368999999998753 34444445567777887
Q ss_pred hccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhh
Q psy16848 94 TLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVS 173 (514)
Q Consensus 94 ~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (514)
++.. +||.|+++.++|......++..|.+++.++..
T Consensus 96 ~l~~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~------------------------------------------ 131 (353)
T PRK05387 96 AFFN--HDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD------------------------------------------ 131 (353)
T ss_pred HhcC--CCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC------------------------------------------
Confidence 7766 99999999999977665555555554433221
Q ss_pred hhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHh
Q psy16848 174 HQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLE 253 (514)
Q Consensus 174 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~ 253 (514)
+++..+.+.+.
T Consensus 132 ---------------------------------------------------------------------~~~~~d~~~l~ 142 (353)
T PRK05387 132 ---------------------------------------------------------------------DDFSIDVEDYL 142 (353)
T ss_pred ---------------------------------------------------------------------CCCCCCHHHHH
Confidence 11111112222
Q ss_pred hccCCCceEEEEecCCCCCccccCHHHHHHHHHHc-CCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc
Q psy16848 254 NMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQH-GALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG 332 (514)
Q Consensus 254 ~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~-gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg 332 (514)
+ +++++++++||||||.+++.+++.++++.+ ++++|+||+|... .+.. ...... ..+.+++++||||.+|
T Consensus 143 ~----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~-~~~~---~~~~~~-~~~~~i~~~S~SK~~~ 213 (353)
T PRK05387 143 R----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDF-GGES---AIPLID-RYPNLLVVQTFSKSRS 213 (353)
T ss_pred h----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCccccc-CCcc---hHHHHh-hCCCEEEEEehhHhhc
Confidence 1 246889999999999999999999999886 9999999999731 1111 111111 1246899999999999
Q ss_pred CCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccC
Q psy16848 333 NIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHT 409 (514)
Q Consensus 333 ~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 409 (514)
.+| ||+++++++++.+......+ ...+.+...+.++.++++. .+..++.+++++++++++.+.|++.|+.+.++
T Consensus 214 ~~GlR~G~~~~~~~~~~~l~~~~~~~-~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 290 (353)
T PRK05387 214 LAGLRVGFAIGHPELIEALNRVKNSF-NSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVLPS 290 (353)
T ss_pred chhhhceeeecCHHHHHHHHHhhccC-CCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeECCC
Confidence 768 99999999999887765332 1235677788777777752 34566788889999999999999988876555
Q ss_pred CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 410 PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 410 ~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
.++++++.++. .+..++++.|. ++||.+..... +...+++|++++ +.+++++++++|++++.
T Consensus 291 ~~~~~~~~~~~-~~~~~~~~~l~-~~gi~v~~~~~---~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 291 KANFVFARHPS-HDAAELAAKLR-ERGIIVRHFNK---PRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred cCcEEEEECCC-CCHHHHHHHHH-HCCEEEEECCC---CCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 66777777663 45778999995 89999974322 234679999998 67999999999998764
No 177
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.94 E-value=6.2e-25 Score=227.72 Aligned_cols=205 Identities=23% Similarity=0.319 Sum_probs=155.4
Q ss_pred CCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCceEEEcCCccccc
Q psy16848 258 KIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG 332 (514)
Q Consensus 258 ~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg 332 (514)
+++++|++++++...|...+ +++|+++|++||+++|.||+++ +|+.|..+ ..+.+++ .||++ +++|.++
T Consensus 224 ~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~--a~~~~gv--~PDiv--t~gK~l~ 297 (459)
T PRK06931 224 RKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMF--AFEHAGI--EPDII--VMSKAVG 297 (459)
T ss_pred CceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHH--HhhhcCC--CCCEE--Eeccccc
Confidence 56899999999999998876 8999999999999999999999 76666432 2234554 89999 8999998
Q ss_pred CCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--CCcc-
Q psy16848 333 NIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI--GFPV- 406 (514)
Q Consensus 333 ~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~- 406 (514)
+ | |.++.++++ +.+.... ...+++.+++.++++.++|+.+.++. ..++.+++.+++.+.|+++ ..++
T Consensus 298 g-G~Pi~av~~~~~~-~~~~~~~--~~~T~~gnpla~aaala~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i 370 (459)
T PRK06931 298 G-GLPLAVLGIKKEF-DAWQPGG--HTGTFRGNQLAMATGLTTLKILKEEN---LAQNAAERGEWLKAQLAELQKRYPCI 370 (459)
T ss_pred C-CcceeeeeeHHHH-hhccCCC--CCCCCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 7 5 667777664 5553322 22355789999999999999887665 6778888888888888765 2332
Q ss_pred --ccCCCcEEEEEeCCC--------------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHH
Q psy16848 407 --EHTPSHIIPIKIGNP--------------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKF 470 (514)
Q Consensus 407 --~~~~~~~~~i~l~~~--------------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~ 470 (514)
+...|.++.+++... .....+...++ ++|+.+.+.. ...+.+|+.++..+|++|++++
T Consensus 371 ~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~-----~~~~~l~~~Ppl~it~~eid~~ 444 (459)
T PRK06931 371 GNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACF-ENGLLLERGG-----RNGNVVRLLPPLLITQAECEEF 444 (459)
T ss_pred EeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHH-HCCcEEeecC-----CCCCEEEEECCCCcCHHHHHHH
Confidence 244667888877421 11345777776 8999986421 1246899999999999999999
Q ss_pred HHHHHHHHHHc
Q psy16848 471 VTDLLAVWKSL 481 (514)
Q Consensus 471 ~~~l~~~l~~~ 481 (514)
++++++++.++
T Consensus 445 ~~~l~~~l~~~ 455 (459)
T PRK06931 445 IDRFEQALLAA 455 (459)
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 178
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1e-24 Score=220.45 Aligned_cols=320 Identities=19% Similarity=0.190 Sum_probs=225.6
Q ss_pred eeeeccc--CCCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-cEEEEecccc-ccccchhh
Q psy16848 19 VTCRLSS--VQYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-AGLVFTSCYV-ANDSTLFT 94 (514)
Q Consensus 19 ~~~d~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~i~~~sGt~-a~~~~l~~ 94 (514)
..+|++. +++..++.+.+++.+.+..... .. ++. +...++++.++++++.+ +.+++++|++ ++..++.+
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~--~~----y~~-~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~ 95 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKSSQV--NI----YPD-PTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLA 95 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhcCcc--cC----CCC-ccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHH
Confidence 4566643 4444578899888887753211 11 111 22578999999998854 4566777765 46666667
Q ss_pred ccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhh
Q psy16848 95 LGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSH 174 (514)
Q Consensus 95 l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (514)
+.. +||.|+++.++|......++..|++++.++.++.
T Consensus 96 l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~----------------------------------------- 132 (351)
T PRK14807 96 FIN--KGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKED----------------------------------------- 132 (351)
T ss_pred hcC--CCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCC-----------------------------------------
Confidence 755 9999999999998776666666666654432100
Q ss_pred hcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhh
Q psy16848 175 QHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLEN 254 (514)
Q Consensus 175 ~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~ 254 (514)
. ..|.+.+++.++.
T Consensus 133 ---------------------~---------------------------------------------~~d~~~l~~~~~~ 146 (351)
T PRK14807 133 ---------------------Y---------------------------------------------TYDVGSFIKVIEK 146 (351)
T ss_pred ---------------------C---------------------------------------------CCCHHHHHHHhhc
Confidence 0 0134444444432
Q ss_pred ccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCC
Q psy16848 255 MDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI 334 (514)
Q Consensus 255 ~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~ 334 (514)
.+++++++++|+||||.+++.+++.++|++++.++|+||+|... .+... .+... ..+..++++||||.+|.+
T Consensus 147 ---~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~-~~~~~---~~~~~-~~~~vi~~~S~SK~~~~~ 218 (351)
T PRK14807 147 ---YQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEF-YGNTI---VDVIN-EFENLIVLRTLSKAFGLA 218 (351)
T ss_pred ---cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhh-cccch---HHHhh-hCCCEEEEecchHhcccc
Confidence 35789999999999999999999999999999999999999732 22211 11111 225689999999999976
Q ss_pred C---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccCC
Q psy16848 335 G---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHTP 410 (514)
Q Consensus 335 G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 410 (514)
| ||+++++++++.+......+ ..+.+.+.++...++. ..+++..+.++++++++.+.|++. |+.+.++.
T Consensus 219 GlRiG~~v~~~~~~~~~~~~~~~~----~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~ 291 (351)
T PRK14807 219 GLRVGYAVANENILKYLNLVKSPY----NINSLSQVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIKVYPSK 291 (351)
T ss_pred hhceeeeecCHHHHHHHHHccCCC----CcCHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEECcCC
Confidence 8 99999999999887655433 4567777777777753 345566677888888899999876 77766667
Q ss_pred CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 411 SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 411 ~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
+.++++.+++ ..++++.|+ ++||.+.++... ....+++|++++ +.++.+++++.|++++
T Consensus 292 ~~~~~i~~~~---~~~~~~~l~-~~gV~v~~~~~~--~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 292 TNFILVKFKD---ADYVYQGLL-ERGILVRDFSKV--EGLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred ccEEEEEcCC---HHHHHHHHH-HCCEEEEECCCC--CCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 7788888763 577888885 889999865421 123579999998 7888999999998753
No 179
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.94 E-value=1.6e-24 Score=224.61 Aligned_cols=366 Identities=12% Similarity=0.089 Sum_probs=228.7
Q ss_pred CCceeeecccC---CCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC-------CCcEEEEec
Q psy16848 16 SNRVTCRLSSV---QYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ-------KEAGLVFTS 83 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-------~~~~i~~~s 83 (514)
+|+.|+||.+. ..+ .||+|.+++.++++++...... .+ ..+...++.+++++.+. .++++|++|
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~-~~---~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~s 137 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLA-GF---THEPAVQLAEQLLAIAPRQDGRAPLSKVFYADN 137 (472)
T ss_pred CCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCcccc-cc---CCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCC
Confidence 55566666332 122 3899999999999875432211 11 24667889999998874 357888999
Q ss_pred cccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--C
Q psy16848 84 CYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--G 161 (514)
Q Consensus 84 Gt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~ 161 (514)
|++|++.|++..... ...+..++++++|.+++.||.. |
T Consensus 138 GSEAvE~AlKlAr~~----------------------------------------~~~~g~~~r~~ii~~~~syHG~t~g 177 (472)
T PRK08742 138 GSAGVEVALKMAFHY----------------------------------------FHNRGEHRRTRFIALENGYHGETIG 177 (472)
T ss_pred chHHHHHHHHHHHHH----------------------------------------HHhcCCCCCcEEEEECCCcCCCchh
Confidence 999999999654320 0001123467788888888621 2
Q ss_pred CccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec
Q psy16848 162 AICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR 241 (514)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~ 241 (514)
.+. .++.. ........+.....-+|.++.... ..+.......
T Consensus 178 als----------------------------~~~~~---------~~~~~~~p~~~~~~~~~~p~~~~~-~~~~~~~~~~ 219 (472)
T PRK08742 178 ALA----------------------------VGDIP---------LYRRVYAPLLLESLFAPSPDAYLA-EPGQSAEDYA 219 (472)
T ss_pred hhh----------------------------ccCCc---------ccccccCCCCCCCEEeCCCCcccc-ccCCCHHHHH
Confidence 111 00000 000000000000000010000000 0000000000
Q ss_pred CCChhHHHHHHhhccCCCceEEEEec-CCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCC
Q psy16848 242 HNDVNHLTQVLENMDVKIPKLVAFET-VHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDG 315 (514)
Q Consensus 242 ~~d~~~l~~~l~~~~~~~~~~vv~~~-~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~ 315 (514)
..+.+.+++.+.+ ..+++++|++++ .++..|...+ +++|+++|++||+++|.||+++ +|+.|..+ ..+.++
T Consensus 220 ~~~~~~l~~~~~~-~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~--a~e~~g 296 (472)
T PRK08742 220 LQAADALQALFEQ-SPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLF--ACEQAG 296 (472)
T ss_pred HHHHHHHHHHHHh-CCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch--HHHhcC
Confidence 1124555566653 235789999999 6888898766 8999999999999999999999 77766432 123455
Q ss_pred CccCceEEEcCCcccccCC---CeEEEecHHHHHHHHhhc--C--ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHH
Q psy16848 316 QLHNMDIISGTLGKAFGNI---GGYIVGTKNFIDTIRSYA--A--GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKH 388 (514)
Q Consensus 316 ~~~~~di~~~S~sK~lg~~---GG~l~~~~~~~~~l~~~~--~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 388 (514)
+ .||++ +++|.+++. -|.+++++++.+.+.... . ..+.+++.+++.++++.++|+.+.++. +.++.
T Consensus 297 v--~PDiv--~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~---l~~~~ 369 (472)
T PRK08742 297 V--MPDLL--CLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDD---VIARN 369 (472)
T ss_pred C--CCCEE--EEcccccCCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCC---HHHHH
Confidence 5 79999 899999761 277888888887764211 1 122355789999999999999987666 56666
Q ss_pred HHHHHHHHHHHHhC-CCcc---ccCCCcEEEEEeCCCc-----------cHHHHHHHHHHhCCeEEecccCCCCCCCCcE
Q psy16848 389 QDIVAYLRNELIQI-GFPV---EHTPSHIIPIKIGNPA-----------LNTKICDMLLKEKGHYVQPINYPTVPVGEEK 453 (514)
Q Consensus 389 ~~~~~~l~~~L~~~-g~~~---~~~~~~~~~i~l~~~~-----------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~ 453 (514)
+++.+++.+.++.. ..+. +...|.++.+++.... ....+.+.++ ++||.+.+. .+.
T Consensus 370 ~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~--------g~v 440 (472)
T PRK08742 370 QPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAAL-ARGVVLRPL--------GDV 440 (472)
T ss_pred HHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHH-HCCeEEEec--------CCE
Confidence 66677776655543 2222 3446678888774211 1245677786 899998641 258
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 454 IRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 454 iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
+|+.+++.+|++|+++++++|+++++++.
T Consensus 441 i~~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 441 LYWMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998754
No 180
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.94 E-value=1.1e-24 Score=226.21 Aligned_cols=364 Identities=15% Similarity=0.119 Sum_probs=231.6
Q ss_pred CCceeeecccCC---CC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSVQ---YK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~~---~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|++|+|+.+.- -+ +||+|.+++.+|+++...... . .-..+...++.+++++++. .++++|++||++|+
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~---~-~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAv 129 (460)
T PRK06916 54 NGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTL---L-GLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAV 129 (460)
T ss_pred CCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccc---c-ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHH
Confidence 555666664321 12 389999999999998543211 1 1124667889999999874 36789999999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccch
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICPL 166 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~ 166 (514)
+.|++..... .-.+..++|++++.++++||.. +.+.
T Consensus 130 e~AlklAr~~----------------------------------------~~~~g~tgr~~ii~~~~~YHG~t~~als-- 167 (460)
T PRK06916 130 EIAIKMAFQY----------------------------------------WQNKGKPKKQRFVTLKNAYHGDTIGAVS-- 167 (460)
T ss_pred HHHHHHHHHH----------------------------------------HHhcCCCCCcEEEEECCcCCcccHHhHh--
Confidence 9999644320 0001124567788888888621 1110
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
..+.. ........+.....-+|.++..... .+.....+...+++
T Consensus 168 --------------------------~s~~~---------~~~~~~~~~~~~~~~~p~p~~~~~~-~~~~~~~~~~~~~~ 211 (460)
T PRK06916 168 --------------------------VGAID---------LFHQVYSSLLFEAIKMPYPYTYRSP-YGNDKAEIVKKHLE 211 (460)
T ss_pred --------------------------ccCCc---------ccccccCCCCCCCEEeCCCcccccc-cCCChHHHHHHHHH
Confidence 00000 0000000000000011111000000 00000000112345
Q ss_pred HHHHHHhhccCCCceEEEEec-CCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCc
Q psy16848 247 HLTQVLENMDVKIPKLVAFET-VHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNM 320 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~-~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~ 320 (514)
.+++.+++. .+++++|++++ +++..|.+.+ +++|+++|++||+++|.||+++ +|+.|..+ ..+.+++ .+
T Consensus 212 ~l~~~l~~~-~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~--a~~~~gv--~P 286 (460)
T PRK06916 212 ELEELLKEK-HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF--ACEHENV--TP 286 (460)
T ss_pred HHHHHHHhC-CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhh--HHHhcCC--CC
Confidence 566666633 35689999999 6998898865 8999999999999999999998 55554322 2234554 79
Q ss_pred eEEEcCCcccccCCC----eEEEecHHHHHHHHhhc-----CceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHH
Q psy16848 321 DIISGTLGKAFGNIG----GYIVGTKNFIDTIRSYA-----AGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDI 391 (514)
Q Consensus 321 di~~~S~sK~lg~~G----G~l~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 391 (514)
|++ +++|.+++ | |.+++++++.+.+.... .....+++.+++.++++.++|+.+.++. +.++.+++
T Consensus 287 Div--~~gK~l~g-G~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~---l~~~~~~~ 360 (460)
T PRK06916 287 DIM--TAGKGLTG-GYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTN---LIEQVARK 360 (460)
T ss_pred Cee--eeehhhhc-CccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHH
Confidence 999 89999976 3 77888988887764311 1122255789999999999999886655 77888888
Q ss_pred HHHHHHHHHhC-CCcc---ccCCCcEEEEEeCCCc-----------cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEE
Q psy16848 392 VAYLRNELIQI-GFPV---EHTPSHIIPIKIGNPA-----------LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRL 456 (514)
Q Consensus 392 ~~~l~~~L~~~-g~~~---~~~~~~~~~i~l~~~~-----------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl 456 (514)
.+++.+.|+++ ..+. +...|.++.+++.+.. ....+...++ ++||.+.+. .+.+|+
T Consensus 361 g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~--------g~~l~~ 431 (460)
T PRK06916 361 TEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSR-ELGMLTRPL--------GNTIVF 431 (460)
T ss_pred HHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHH-HCCeEEEec--------CCEEEE
Confidence 99999888876 2222 2345667777764211 1246778886 899998642 248999
Q ss_pred EeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 457 APTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 457 ~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
.++..+|++|+++++++++++++++
T Consensus 432 ~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 432 MPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred eCCcccCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999865
No 181
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1e-24 Score=221.91 Aligned_cols=322 Identities=18% Similarity=0.173 Sum_probs=221.5
Q ss_pred eeecccC--CCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHc----CC---CcEEEEeccc-cccc
Q psy16848 20 TCRLSSV--QYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLH----QK---EAGLVFTSCY-VAND 89 (514)
Q Consensus 20 ~~d~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~---~~~i~~~sGt-~a~~ 89 (514)
.+|+..+ .+..+|.+.+++.+++.........+. ..| ..++++.+++++ |. +..|++++|+ +++.
T Consensus 28 ~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~-~~g----~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~ 102 (368)
T PRK03317 28 PVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYP-DRD----AVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQ 102 (368)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCC-CCc----hHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHH
Confidence 4677543 344578899999988764221111111 112 345555555555 42 2346666665 5677
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.++.++.. +||.|+++.++|......++..|.+++.++..+
T Consensus 103 ~~~~~~~~--~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~------------------------------------- 143 (368)
T PRK03317 103 QLLQAFGG--PGRTALGFVPSYSMHPIIARGTHTEWVEGPRAA------------------------------------- 143 (368)
T ss_pred HHHHHhcC--CCCEEEEeCCChHHHHHHHHhcCCeeEEcccCC-------------------------------------
Confidence 77777766 999999999999888776666666555432110
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHH
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLT 249 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 249 (514)
+. .-|.+.++
T Consensus 144 -------------------------~~---------------------------------------------~~d~~~l~ 153 (368)
T PRK03317 144 -------------------------DF---------------------------------------------TLDVDAAV 153 (368)
T ss_pred -------------------------CC---------------------------------------------CCCHHHHH
Confidence 00 01344555
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccc-cCCCCCCccccCCCccCceEEEcCCc
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL-YGEHGAGIGERDGQLHNMDIISGTLG 328 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~-~g~~~~~~~~~~~~~~~~di~~~S~s 328 (514)
+.+++ .+++++++++|+||||.+++.+++.++++.+++++|+||+|+... .+.. +...... .....++++|||
T Consensus 154 ~~~~~---~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~--~~~~~~~-~~~~~i~~~SfS 227 (368)
T PRK03317 154 AAIAE---HRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTP--SALTLLP-EYPRLVVSRTMS 227 (368)
T ss_pred HHHhc---cCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCc--CHHHHHH-hCCCEEEEEech
Confidence 55442 246788899999999999999999999999999999999999332 2211 1111211 123568899999
Q ss_pred ccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCc
Q psy16848 329 KAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFP 405 (514)
Q Consensus 329 K~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 405 (514)
|.+|.+| ||+++++++++.+......+ ..+++.++++.++++.. +...+.+++++++++.+.+.|++.|+.
T Consensus 228 K~~g~~GlRiG~~~~~~~~~~~l~~~~~~~----~~s~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~ 301 (368)
T PRK03317 228 KAFAFAGGRLGYLAAAPAVVDALRLVRLPY----HLSAVTQAAARAALRHA--DELLASVAALRAERDRVVAWLRELGLR 301 (368)
T ss_pred hhhccchhhhhhhhCCHHHHHHHHhcCCCC----CCCHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCE
Confidence 9999768 99999999999887655332 56788888888888743 234455667788888899999988887
Q ss_pred cccCCCcEEEE-EeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 406 VEHTPSHIIPI-KIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 406 ~~~~~~~~~~i-~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
+..+.++++.+ .++ +..++.+.|+ ++||.+.+... ++++|++++ +.+++++++++++++++.
T Consensus 302 ~~~~~~~~~~~~~~~---~~~~~~~~l~-~~Gv~v~~~~~------~~~iRi~~~---~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 302 VAPSDANFVLFGRFA---DRHAVWQGLL-DRGVLIRDVGI------PGWLRVTIG---TPEENDAFLAALAEVLAT 364 (368)
T ss_pred eCCCCCcEEEEeccC---CHHHHHHHHH-HCCEEEEeCCC------CCeEEEecC---CHHHHHHHHHHHHHHHHH
Confidence 77777776544 332 3678888885 89999985321 469999987 789999999999998754
No 182
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.94 E-value=2.1e-24 Score=222.80 Aligned_cols=342 Identities=18% Similarity=0.198 Sum_probs=227.5
Q ss_pred CCceeeecccCC---CCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHc-CCCcEEEEeccccccc
Q psy16848 16 SNRVTCRLSSVQ---YKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLH-QKEAGLVFTSCYVAND 89 (514)
Q Consensus 16 ~g~~~~d~~~~~---~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-~~~~~i~~~sGt~a~~ 89 (514)
+|++|+|+.+.- .++ ||+|.+++.+|+++... .+ -..+...++.+++.+.+ +.++++|++||++|++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~------~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e 123 (428)
T PRK12389 51 DGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVL-YG------TPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVM 123 (428)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCc-cC------CCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHH
Confidence 566677764322 223 79999999999997321 11 12466788888988876 4567899999999999
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccchh
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICPLK 167 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 167 (514)
.|++... ..+++++++.+++.||-. +.+.
T Consensus 124 ~AlklAr----------------------------------------------~~tgr~~ii~~~~~yHG~t~~~~~--- 154 (428)
T PRK12389 124 TTIRVAR----------------------------------------------AYTGRTKIIKFAGCYHGHSDLVLV--- 154 (428)
T ss_pred HHHHHHH----------------------------------------------HhhCCCEEEEECCCcCCChHHHHH---
Confidence 9995433 223456666666666521 1000
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHh-hCCCCEEEecCCChh
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIR-NSSAPKIIYRHNDVN 246 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~-~~g~~~~~v~~~d~~ 246 (514)
..+.. .. ... .+....+. .....+..++++|.+
T Consensus 155 -------------------------~~~~~-----------------~~--~~~--~~~~~~~~~~~~~~~~~~~~~d~~ 188 (428)
T PRK12389 155 -------------------------AAGSG-----------------PS--TLG--TPDSAGVPKSIAQEVITVPFNDIE 188 (428)
T ss_pred -------------------------hcCCc-----------------cc--ccC--CCCCCCCCCcccCceEEcCCCCHH
Confidence 00000 00 000 00000000 011245667788999
Q ss_pred HHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceE
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDI 322 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di 322 (514)
.+++.+++.. +++++|+++++++..|.+.| +++|+++|++||+++|.||+++-+..+.. +..+.+++ .+|+
T Consensus 189 ~l~~~l~~~~-~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~--~a~~~~gv--~PDi 263 (428)
T PRK12389 189 ALKEALDKWG-DEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYG--GAQDLLGV--EPDL 263 (428)
T ss_pred HHHHHHHhcC-CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcc--hhhHHhCC--CCCe
Confidence 9999887543 56899999999999999888 99999999999999999999992233211 12334454 7999
Q ss_pred EEcCCcccccCCC---eEEEecHHHHHHHHhhcC-ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q psy16848 323 ISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAA-GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNE 398 (514)
Q Consensus 323 ~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 398 (514)
+ +++|++++ | |.+++++++.+.+..... ....+++.+++.++++.++|+.+.++. +.++++++.+++++.
T Consensus 264 v--t~gK~lgg-G~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~---l~~~~~~~g~~l~~~ 337 (428)
T PRK12389 264 T--ALGKIIGG-GLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEG---VYEKLDRLGAMLEEG 337 (428)
T ss_pred e--eechhhcC-CCceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHH
Confidence 8 99999986 4 777889999888753221 122255789999999999999986554 778888889998888
Q ss_pred HHhC----CCcccc-CCCcEEEEEeCCC-------------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCC
Q psy16848 399 LIQI----GFPVEH-TPSHIIPIKIGNP-------------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTP 460 (514)
Q Consensus 399 L~~~----g~~~~~-~~~~~~~i~l~~~-------------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~ 460 (514)
|+++ ++.... ...+++.+.+... .....+.+.++ ++||++.+... +.+ .++.
T Consensus 338 L~~l~~~~~~~~~v~r~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~-------~~~--~~~l 407 (428)
T PRK12389 338 ILEAAEKHGITITINRLKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLML-NQGINLAPSKY-------EAW--FLTT 407 (428)
T ss_pred HHHHHHhCCCCEEEEecCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHH-HCCcEeecCCC-------CCe--eecC
Confidence 8764 322211 2223666655321 11356778886 89999975421 122 3566
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy16848 461 FHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 461 ~~t~e~id~~~~~l~~~l~~ 480 (514)
.+|++|++++++++++++++
T Consensus 408 ~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 408 AHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 78999999999999998865
No 183
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.94 E-value=7.8e-25 Score=225.31 Aligned_cols=337 Identities=17% Similarity=0.123 Sum_probs=226.3
Q ss_pred eeeecccCCCCCChhHHHHHHHHHHHhCCCCCC-cC-cccCcchHHHHHHHHHHhHcCCC--cEEEEeccccccccchhh
Q psy16848 19 VTCRLSSVQYKVPKGGRKCLGEALEKFGTGAGG-TR-NISGNSLFHEKLEEDVAKLHQKE--AGLVFTSCYVANDSTLFT 94 (514)
Q Consensus 19 ~~~d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~la~~~~~~--~~i~~~sGt~a~~~~l~~ 94 (514)
.|.|.++... -++.+.+++.+.++....+... .. ......+..+++++.+++++|.+ ..+|++|||+++..++.+
T Consensus 5 ~yld~aa~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~ 83 (402)
T TIGR02006 5 IYLDYAATTP-VDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKG 83 (402)
T ss_pred EEeeCCcCCC-CCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHH
Confidence 5677765543 3688999998888653222211 11 11112356788999999999965 456667778888877766
Q ss_pred ccc--cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhh
Q psy16848 95 LGK--MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEV 172 (514)
Q Consensus 95 l~~--~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (514)
+.. ..+||+|+++..+|.++...++..
T Consensus 84 l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~--------------------------------------------------- 112 (402)
T TIGR02006 84 IAHFYKSKGNHIITSKTEHKAVLDTCRYL--------------------------------------------------- 112 (402)
T ss_pred HHHhhcCCCCEEEECCCccHHHHHHHHHH---------------------------------------------------
Confidence 531 248999999999999987543211
Q ss_pred hhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-----CChhH
Q psy16848 173 SHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-----NDVNH 247 (514)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-----~d~~~ 247 (514)
...|.+++.++. .|.+.
T Consensus 113 ----------------------------------------------------------~~~g~~v~~v~~~~~~~~d~~~ 134 (402)
T TIGR02006 113 ----------------------------------------------------------EREGFEVTYLPPKSNGLIDLEE 134 (402)
T ss_pred ----------------------------------------------------------HhcCCEEEEEccCCCCcCCHHH
Confidence 111223333331 13333
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCC
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTL 327 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~ 327 (514)
+++. .+++++++++++++|++|...|+++|.++|+++|+++++|++++.|.. +......++|++++|+
T Consensus 135 l~~~----l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~--------~~~~~~~~~D~~~~s~ 202 (402)
T TIGR02006 135 LKAA----IRDDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKI--------PINVNELKVDLMSISG 202 (402)
T ss_pred HHHh----cCCCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCc--------ccCccccCCCEEEEeh
Confidence 4333 345689999999999999999999999999999999999999997654 1111134789999999
Q ss_pred cccccCCC-eEEEecHHHHHHHHhhcCce-----EeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy16848 328 GKAFGNIG-GYIVGTKNFIDTIRSYAAGF-----IFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQ 401 (514)
Q Consensus 328 sK~lg~~G-G~l~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 401 (514)
||.+|+.| |+++.+++....+.....+. ....+.+.....++..+++.+. ++++.+.++.+++.+++.+.|++
T Consensus 203 ~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~ 281 (402)
T TIGR02006 203 HKIYGPKGIGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKS 281 (402)
T ss_pred hhhcCCCceEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhc
Confidence 99988877 88877765443333221110 0123456667777778888764 46778889999999999999987
Q ss_pred C-CCccccC---CC-cEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCC----------------CCcEEEEEeCC
Q psy16848 402 I-GFPVEHT---PS-HIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPV----------------GEEKIRLAPTP 460 (514)
Q Consensus 402 ~-g~~~~~~---~~-~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~----------------~~~~iRl~~~~ 460 (514)
+ ++.+..+ .. +.+.+.++. ...+++...+ +++.++.|..|.... ..+++|+|++.
T Consensus 282 ~~~v~~~~~~~~~~p~~~~v~f~~-~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~ 357 (402)
T TIGR02006 282 IEEVYLNGDLEHRVPGNLNVSFNY-VEGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGR 357 (402)
T ss_pred CCCEEEeCCccccCCCeEEEEEeC-cCHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecC
Confidence 6 5544322 11 222333332 2244554443 588888777654211 13799999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHcC
Q psy16848 461 FHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 461 ~~t~e~id~~~~~l~~~l~~~~ 482 (514)
.+|++|+|++++.|+++++.++
T Consensus 358 ~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 358 FTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887653
No 184
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.1e-24 Score=221.75 Aligned_cols=324 Identities=17% Similarity=0.130 Sum_probs=221.0
Q ss_pred ceeeecccC--CCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-cEEEEeccc-cccccchh
Q psy16848 18 RVTCRLSSV--QYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-AGLVFTSCY-VANDSTLF 93 (514)
Q Consensus 18 ~~~~d~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~i~~~sGt-~a~~~~l~ 93 (514)
..++|+..+ .+...|.+.+++.+..... .. |+.... .++++.++++++.+ ..+++++|+ +++..++.
T Consensus 36 ~~~i~l~~~~~~~~~~~~~~~al~~~~~~~-~~-------Y~~~~g-~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~ 106 (371)
T PRK05166 36 PRIAKLGSNENPLGPSPAVRRAFADIAELL-RL-------YPDPQG-RALREAIAARTGVPADRIILGNGSEDLIAVICR 106 (371)
T ss_pred cceEEcCCCCCCCCCCHHHHHHHHHHHHHh-hc-------CCCCcH-HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHH
Confidence 357888653 3444677888877644321 11 122222 37888899998754 345566665 55666666
Q ss_pred hccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhh
Q psy16848 94 TLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVS 173 (514)
Q Consensus 94 ~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (514)
++.+ +||.|+++.++|......++..|.+++.++....
T Consensus 107 ~~~~--~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~---------------------------------------- 144 (371)
T PRK05166 107 AVLR--PGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPD---------------------------------------- 144 (371)
T ss_pred HhcC--CCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCC----------------------------------------
Confidence 6655 9999999999998877666666665554432100
Q ss_pred hhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHh
Q psy16848 174 HQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLE 253 (514)
Q Consensus 174 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~ 253 (514)
. .-|.+.+++.+
T Consensus 145 ----------------------~---------------------------------------------~~~~~~l~~~~- 156 (371)
T PRK05166 145 ----------------------L---------------------------------------------GFDLDALCAAV- 156 (371)
T ss_pred ----------------------C---------------------------------------------CCCHHHHHHhh-
Confidence 0 00334444433
Q ss_pred hccCCCceEEEEecCCCCCccccCHHHHHHHHHH--cCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccc
Q psy16848 254 NMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQ--HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 254 ~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~--~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l 331 (514)
+++++++++++++||||.+++.+++.++++. .++++|+||+|.....+....+.........+..++++||||.+
T Consensus 157 ---~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~ 233 (371)
T PRK05166 157 ---ARAPRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAY 233 (371)
T ss_pred ---hcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhh
Confidence 3457899999999999999997666666654 48899999999854433222121111110123579999999999
Q ss_pred cCCC---eEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccc
Q psy16848 332 GNIG---GYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVE 407 (514)
Q Consensus 332 g~~G---G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 407 (514)
|.+| ||+++ ++++++.+......+ +.+.+.+.++.+++.. .+++++.++.++++++++.+.|++.|+.+.
T Consensus 234 ~l~GlRiG~~i~~~~~l~~~~~~~~~~~----~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~ 307 (371)
T PRK05166 234 GLAGLRVGYGLVSDPELVGLLDRVRTPF----NVNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEMGYRIA 307 (371)
T ss_pred hcchhheeeeecCCHHHHHHHHHhccCC----CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCcCeeC
Confidence 9768 99765 678888887654332 4677777777777752 346677788889999999999999888766
Q ss_pred cCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 408 HTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 408 ~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
++.+.++++.++. +..++++.|+ ++||.+.++..+ ...+++|++++ +.++.+++.+.|+.++
T Consensus 308 p~~g~fl~~~~~~--~~~~l~~~l~-~~gi~v~p~~~~---~~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 308 PSRANFLFFDARR--PASAVAEALL-RQGVIVKPWKQP---GFETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred CCcCCEEEEeCCC--CHHHHHHHHH-HCCeEEecCCCC---CCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 6677787777653 3678999996 789999987642 23679999999 7888999999988764
No 185
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.94 E-value=6.1e-25 Score=225.63 Aligned_cols=344 Identities=14% Similarity=0.137 Sum_probs=231.6
Q ss_pred CCceeeecccCC---CCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC--CcEEEEecccccc
Q psy16848 16 SNRVTCRLSSVQ---YKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK--EAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~~---~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~i~~~sGt~a~ 88 (514)
+|++|+|+.+.- .+| ||++.+++.+++++. ... .-..+...++.+++.+.++. +++.|++||++|+
T Consensus 51 dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~-~~~------~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~ 123 (433)
T PRK00615 51 LGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERG-TSY------GLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEAT 123 (433)
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhC-CCC------CCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHH
Confidence 677777774422 223 899999999999873 211 11246678889999988753 4789999999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccc--cCCccch
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSM--TGAICPL 166 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~ 166 (514)
+.|++.. +..++|++++.++++||. +..+..
T Consensus 124 e~AiklA----------------------------------------------r~~tgr~~ii~~~~~yHG~td~~~~~- 156 (433)
T PRK00615 124 MTAVRLA----------------------------------------------RGITGRSIIIKFLGCYHGHADTLLQG- 156 (433)
T ss_pred HHHHHHH----------------------------------------------HHhhCCCEEEEEcCccCCCCcccCcc-
Confidence 9999533 233456778888888862 110000
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
....+. ..++ .+..+ ...........++++|.+
T Consensus 157 ------------------------~~~~~~------------------~~~~---~~~~~--~~~~~~~~~~~~~~~d~~ 189 (433)
T PRK00615 157 ------------------------ISFSET------------------SLDT---LTHLV--DTDLAHPLTLSLPYNDFQ 189 (433)
T ss_pred ------------------------cccCCC------------------CcCc---CCCCC--CCCCCCCCeEeCCCCCHH
Confidence 000000 0000 00000 000011223456778899
Q ss_pred HHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEeccccccc-cCCCCCCccccCCCccCce
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGL-YGEHGAGIGERDGQLHNMD 321 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~-~g~~~~~~~~~~~~~~~~d 321 (514)
.+++.+.+.. +++++|+++++++..|...| +++|+++|++||+++|+||+++ |+ .|.. +..+.+++ .+|
T Consensus 190 ~l~~~l~~~~-~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~R~G~~--ga~~~~gv--~PD 263 (433)
T PRK00615 190 IFQTVMNSLG-HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GFRVAQG--GAAAIYHV--KPD 263 (433)
T ss_pred HHHHHHHhcC-CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-cccccHh--HHHHhcCC--CCC
Confidence 9999987543 56889999999999999887 6799999999999999999996 43 4422 23344554 789
Q ss_pred EEEcCCcccccC--CCeEEEecHHHHHHHHhhcCc-eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q psy16848 322 IISGTLGKAFGN--IGGYIVGTKNFIDTIRSYAAG-FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNE 398 (514)
Q Consensus 322 i~~~S~sK~lg~--~GG~l~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 398 (514)
++ +++|++|+ ++|++++++++.+.+...... ...+++.+++.++++.++|+.+.++. .+++++++.+++.+.
T Consensus 264 i~--~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~---~~~~~~~~g~~l~~~ 338 (433)
T PRK00615 264 IT--VYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQG---FYTQLSTLEQNFLSP 338 (433)
T ss_pred eE--EEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHH
Confidence 98 79999975 358899999999888543221 12244689999999999999886554 677777788888666
Q ss_pred HHhC----CCcccc-CCCcEEEEEeCCC-------------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCC
Q psy16848 399 LIQI----GFPVEH-TPSHIIPIKIGNP-------------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTP 460 (514)
Q Consensus 399 L~~~----g~~~~~-~~~~~~~i~l~~~-------------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~ 460 (514)
|++. ++++.. ..+.++.+.+.+. .....+...|+ ++||++.+..++. ..++.
T Consensus 339 l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~---------~~ls~ 408 (433)
T PRK00615 339 IEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAF-SKGVYLSPSPFEA---------SFLSS 408 (433)
T ss_pred HHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHH-HCCeeecCccccc---------cceec
Confidence 6553 555321 2566777777432 11346888886 8999997655422 13455
Q ss_pred CCCHHHHHHHHHHHHHHHHHc
Q psy16848 461 FHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 461 ~~t~e~id~~~~~l~~~l~~~ 481 (514)
.+|++|+|+++++++++++++
T Consensus 409 ~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 409 AHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 689999999999999998874
No 186
>KOG1402|consensus
Probab=99.94 E-value=4.3e-25 Score=205.28 Aligned_cols=344 Identities=19% Similarity=0.169 Sum_probs=249.3
Q ss_pred CCceeeecccCCCC-------------CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEe
Q psy16848 16 SNRVTCRLSSVQYK-------------VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFT 82 (514)
Q Consensus 16 ~g~~~~d~~~~~~~-------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~ 82 (514)
+|.+++|..+..|+ .||.+.+++.+|.++.-. +++.+| .....++++.+++++|.+..+=.+
T Consensus 49 ~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtl---ssrafY--nd~~~~f~~~vt~lf~~~kvlpmn 123 (427)
T KOG1402|consen 49 KGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTL---SSRAFY--NDVLGEFAEYVTKLFGYDKVLPMN 123 (427)
T ss_pred CCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhh---hhHHHh--hhhHHHHHHHHHHhcCcceeeecc
Confidence 56666666666665 289999999999997432 334444 467789999999999999998899
Q ss_pred ccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccc--cc
Q psy16848 83 SCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHS--MT 160 (514)
Q Consensus 83 sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~--~~ 160 (514)
+|.+|++.++.-..+++ ..-+..+..+.+++.+.+.|| +.
T Consensus 124 TGaEa~Eta~KLaR~wg--------------------------------------y~~K~ip~nka~il~~~~nFhGrT~ 165 (427)
T KOG1402|consen 124 TGAEAVETACKLARKWG--------------------------------------YRKKNIPKNKAKILSAENNFHGRTL 165 (427)
T ss_pred cchhHHHHHHHHHHHHH--------------------------------------HhhccCCccceeEEEecccccCcee
Confidence 99999999986544210 000111223344555555553 11
Q ss_pred CCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEe
Q psy16848 161 GAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIY 240 (514)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v 240 (514)
|.+.. .+ =|+++...-.........+
T Consensus 166 ~ais~-------------------------s~-----------------------------d~ds~~~fgp~~P~~~~~v 191 (427)
T KOG1402|consen 166 GAISL-------------------------ST-----------------------------DPDSWDGFGPFLPGVVDKV 191 (427)
T ss_pred eeEEe-------------------------cC-----------------------------CcchhhccCCCCCCcceee
Confidence 11100 00 0011111112222336677
Q ss_pred cCCChhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCC
Q psy16848 241 RHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDG 315 (514)
Q Consensus 241 ~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~ 315 (514)
|++|.++++.+|++ ++.+++++++.|...|++.| +++++++|++|++++|.||+|+ +++.|+.. ..++..
T Consensus 192 ~Y~d~eale~~l~~---~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~l--a~d~en 266 (427)
T KOG1402|consen 192 PYGDAEALEVALKS---PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLL--ACDYEN 266 (427)
T ss_pred ccCCHHHHHHHhcC---CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEE--Eeehhh
Confidence 88999999999987 67899999999999999988 8999999999999999999999 55555422 233433
Q ss_pred CccCceEEEcCCcccccCCC----eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHH
Q psy16848 316 QLHNMDIISGTLGKAFGNIG----GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDI 391 (514)
Q Consensus 316 ~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 391 (514)
..+|++ -++|++++ | +.+++++++.-.+++..++- +++.+++.++++.++|+.+.++. +.++...+
T Consensus 267 --v~PDiv--ilgKalSG-G~~Pvsavl~~~~im~~~~pgeHgs--TyggNpLg~~vaiAalevi~eek---L~era~~l 336 (427)
T KOG1402|consen 267 --VRPDIV--ILGKALSG-GVYPVSAVLADDDIMLNIKPGEHGS--TYGGNPLGCAVAIAALEVIVEEK---LVERAAKL 336 (427)
T ss_pred --cCCCeE--EEeccccC-CeeeeEEEEecHHHHhccCCCcccc--ccCCChHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 478999 79999987 5 66788888888887777665 45889999999999999997665 88889999
Q ss_pred HHHHHHHHHhC--CC----ccccCCCcEEEEEeC----CCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCC
Q psy16848 392 VAYLRNELIQI--GF----PVEHTPSHIIPIKIG----NPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPF 461 (514)
Q Consensus 392 ~~~l~~~L~~~--g~----~~~~~~~~~~~i~l~----~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~ 461 (514)
.+.++..|.++ .+ ..+...|.+..+.+. ...++.++|-.+ +++|+...|.+ .+.+|+++++.
T Consensus 337 G~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~l-k~~g~LAkptH-------~~IiRfaPPL~ 408 (427)
T KOG1402|consen 337 GEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLAL-KENGLLAKPTH-------GNIIRFAPPLV 408 (427)
T ss_pred HHHHHHHHHhccccccchhheeeccceEEEEEeccccccchhHHHHHHcc-cccccccCCCC-------CCeEEecCCcc
Confidence 99999999988 33 223456666666654 224567788888 59999987544 45999999999
Q ss_pred CCHHHHHHHHHHHHHHHH
Q psy16848 462 HTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 462 ~t~e~id~~~~~l~~~l~ 479 (514)
++++|+++.++++.+.+.
T Consensus 409 I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 409 ISEEDLREGIEAIEKTIA 426 (427)
T ss_pred cCHHHHHHHHHHHHHHhc
Confidence 999999999999988753
No 187
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.94 E-value=7.7e-25 Score=224.82 Aligned_cols=357 Identities=15% Similarity=0.121 Sum_probs=228.6
Q ss_pred CCceeeecccC---CCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|+.|+||.+. ..+ +||++.+++.+++++....... .-..+...++.+++++.+. .++++|++||++|+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~----~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~ 113 (422)
T PRK05630 38 DGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFG----GLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSV 113 (422)
T ss_pred CCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccC----CcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHH
Confidence 55666666432 222 3799999999999985432111 1124667889999999873 56789999999999
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccch
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICPL 166 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~ 166 (514)
+.|++...... -.+...+|++++.+++.||-. +.+.
T Consensus 114 e~AlklAr~~~----------------------------------------~~~g~~~r~~ii~~~~~yHG~t~~als-- 151 (422)
T PRK05630 114 EVAIKMALQYS----------------------------------------KGQGHPERTRLLTWRSGYHGDTFAAMS-- 151 (422)
T ss_pred HHHHHHHHHHH----------------------------------------HhcCCCCCcEEEEECCCcCCccHHHhc--
Confidence 99996543200 001112456788888888621 1110
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
..+.. .........+......+|.+... ..+.++.+
T Consensus 152 --------------------------~~~~~--------~~~~~~~~~~~~~~~~~p~~~~~----------~~~~~~~~ 187 (422)
T PRK05630 152 --------------------------VCDPE--------GGMHSLWKGTLPEQIFAPAPPVR----------GSSPQEIS 187 (422)
T ss_pred --------------------------cCCCc--------ccccccccccCCCCeEcCCCccc----------CCChHHHH
Confidence 00000 00000000000000000000000 00111222
Q ss_pred HHHHHHhhccCCCceEEEEecC-CCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCc-cccCCCccCc
Q psy16848 247 HLTQVLENMDVKIPKLVAFETV-HSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGI-GERDGQLHNM 320 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~-~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~-~~~~~~~~~~ 320 (514)
...+.+++...+++++|++++. ++..|...+ +++|+++|++||+++|+||+++ |+ |+.|..+ .+.+++ .|
T Consensus 188 ~~~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~t-G~-GrtG~~~a~~~~gv--~P 263 (422)
T PRK05630 188 EYLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIAT-GF-GRTGELFATLAAGV--TP 263 (422)
T ss_pred HHHHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccee-CC-CcCchhhHHHhcCC--CC
Confidence 2233333333356899999996 888888766 8999999999999999999997 33 3444332 234444 79
Q ss_pred eEEEcCCcccccC---CCeEEEecHHHHHHHHhhc--C--ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy16848 321 DIISGTLGKAFGN---IGGYIVGTKNFIDTIRSYA--A--GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVA 393 (514)
Q Consensus 321 di~~~S~sK~lg~---~GG~l~~~~~~~~~l~~~~--~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 393 (514)
|++ +++|++++ ++|++++++++.+.+.... . ....++..++..++++.++|+.+.++. .+++++++.+
T Consensus 264 Di~--t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~---~~~~~~~~g~ 338 (422)
T PRK05630 264 DIM--CVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGM---WRKQVKRIEA 338 (422)
T ss_pred Cee--eeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCc---HHHHHHHHHH
Confidence 999 99999954 3488889999988875321 1 122355789999999999999986554 5678888888
Q ss_pred HHHHHHHhC-CCcc---ccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHH
Q psy16848 394 YLRNELIQI-GFPV---EHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDK 469 (514)
Q Consensus 394 ~l~~~L~~~-g~~~---~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~ 469 (514)
++++.|+++ ..+. +...|.++.+++.+......+.+.++ ++|+++.+. .+.+|+.++..+|++|+|+
T Consensus 339 ~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~~~~~~~~~~~-~~Gl~~~~~--------g~~l~~~PpL~it~~~i~~ 409 (422)
T PRK05630 339 ELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPVDMEEATQAAV-DHGVWLRPF--------GRLVYVMPPYITTSEQIAQ 409 (422)
T ss_pred HHHHHHHHhhcCCCeeeeeccccEEEEEECCcccHHHHHHHHH-HCCeEEEec--------CCEEEEECCccCCHHHHHH
Confidence 888877764 2222 33457788888865444567888886 899998631 2589999999999999999
Q ss_pred HHHHHHHHHHH
Q psy16848 470 FVTDLLAVWKS 480 (514)
Q Consensus 470 ~~~~l~~~l~~ 480 (514)
++++++++++.
T Consensus 410 ~~~~l~~al~~ 420 (422)
T PRK05630 410 ICAALAAAVKA 420 (422)
T ss_pred HHHHHHHHHhc
Confidence 99999998864
No 188
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=2.4e-24 Score=223.34 Aligned_cols=340 Identities=18% Similarity=0.182 Sum_probs=238.5
Q ss_pred eeec-ccCCCCCChhHHHHHHHHH-HHhCCCCCCcCcccCcchHHHHHHH----HHHhHcCCCc-EEEE----ecccccc
Q psy16848 20 TCRL-SSVQYKVPKGGRKCLGEAL-EKFGTGAGGTRNISGNSLFHEKLEE----DVAKLHQKEA-GLVF----TSCYVAN 88 (514)
Q Consensus 20 ~~d~-~~~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~la~~~~~~~-~i~~----~sGt~a~ 88 (514)
.+.+ +|.+|. .|.+.+++...+ .+|+.+++++++..|+. .++++|+ +..+.|+.++ .+.+ +||+.||
T Consensus 36 ~l~liasen~~-s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~-~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN 113 (475)
T PLN03226 36 GLELIASENFT-SRAVMEALGSCLTNKYSEGLPGARYYGGNE-YIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPAN 113 (475)
T ss_pred CeeEecCCccC-CHHHHHHHhhHHhccccCCCCCCcCcCCCh-hHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHH
Confidence 3444 344443 588999999999 78999999999988875 7777775 4566667554 3334 8999999
Q ss_pred ccchhhccccCCCceEEecC------ccchhhhhhhhcCCCCee----eccCCChHHHHHHHHhcccCCCcEEEeecccc
Q psy16848 89 DSTLFTLGKMIPGLHYISDA------GNHASMIQGIRNSSAPKI----IYRHNDVNHLTQVLENMDVKIPKLVAFETVHS 158 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~------~~h~~~~~~~~~~~~~~~----~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~ 158 (514)
+.++.++++ |||.|+..+ ..|.+...+.+....... .|.++.
T Consensus 114 ~av~~aL~~--pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-------------------------- 165 (475)
T PLN03226 114 FAVYTALLQ--PHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-------------------------- 165 (475)
T ss_pred HHHHHHhCC--CCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC--------------------------
Confidence 999999977 999999855 556665555544443322 333330
Q ss_pred ccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEE
Q psy16848 159 MTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKI 238 (514)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~ 238 (514)
..|
T Consensus 166 ------------------------------------~~g----------------------------------------- 168 (475)
T PLN03226 166 ------------------------------------STG----------------------------------------- 168 (475)
T ss_pred ------------------------------------CCC-----------------------------------------
Confidence 000
Q ss_pred EecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCcc
Q psy16848 239 IYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLH 318 (514)
Q Consensus 239 ~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~ 318 (514)
.-|++.+++.+++. ++++|++. . +.+|...|+++|.++|+++|+++++|++|..|..+..+.+. . ..
T Consensus 169 ---~iD~d~Le~~l~~~---~pklIv~~-~-S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~--p---~~ 235 (475)
T PLN03226 169 ---LIDYDKLEKKAMLF---RPKLIIAG-A-SAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAAS--P---FE 235 (475)
T ss_pred ---CcCHHHHHHHHhhc---CCeEEEEe-c-CcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCC--C---CC
Confidence 01455555555432 24555442 2 23678888999999999999999999999988876544211 1 12
Q ss_pred CceEEEcCCcccc-cCCCeEEEecHHHH-----------HH--HHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHH
Q psy16848 319 NMDIISGTLGKAF-GNIGGYIVGTKNFI-----------DT--IRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVEL 384 (514)
Q Consensus 319 ~~di~~~S~sK~l-g~~GG~l~~~~~~~-----------~~--l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 384 (514)
.+|++++|+||++ |+.||+++++++.. +. .........++++.++...++..++++.+...+.+++
T Consensus 236 ~~Div~~t~hK~L~GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~ 315 (475)
T PLN03226 236 YCDVVTTTTHKSLRGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAY 315 (475)
T ss_pred CCeEEEecCcccccCCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHH
Confidence 6899999999999 78889888887544 22 1121222234556677778888889998877777888
Q ss_pred HHHHHHHHHHHHHHHHhCCCccccC--CCcEEEEEe-CCCccHHHHHHHHHHhCCeEEecccCCCC--CCCCcEEEE---
Q psy16848 385 RAKHQDIVAYLRNELIQIGFPVEHT--PSHIIPIKI-GNPALNTKICDMLLKEKGHYVQPINYPTV--PVGEEKIRL--- 456 (514)
Q Consensus 385 ~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~i~l-~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~--~~~~~~iRl--- 456 (514)
++++.++.+++.+.|.+.|+.+..+ ..+++.+.+ +.+.+..++.+.| ++.||.+.....|.. +...+.+|+
T Consensus 316 ~~~~~~na~~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L-~~~~I~~nk~~~p~~~~~~~~~giRiGt~ 394 (475)
T PLN03226 316 QKQVKANAAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVL-DLAHITLNKNAVPGDSSALVPGGVRIGTP 394 (475)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCCHHHHHHHH-HHCCCEECCCCCCCCcccCCCCCcccCcH
Confidence 9999999999999999999988753 356776766 3344566777777 699999976543221 123467888
Q ss_pred -EeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 457 -APTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 457 -~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
..+..++++|++++++.|.++++.
T Consensus 395 ~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 395 AMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 455688999999999999999874
No 189
>PRK06149 hypothetical protein; Provisional
Probab=99.94 E-value=1.2e-24 Score=244.50 Aligned_cols=351 Identities=19% Similarity=0.187 Sum_probs=232.9
Q ss_pred CCceeeecccCCC-C--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHc--CCCcEEEEecccccccc
Q psy16848 16 SNRVTCRLSSVQY-K--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLH--QKEAGLVFTSCYVANDS 90 (514)
Q Consensus 16 ~g~~~~d~~~~~~-~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~--~~~~~i~~~sGt~a~~~ 90 (514)
+|+.|+||.++.. + +||+|.+++.+++.+..+. ++. ..+...++++++++++ +.++++|++||++|++.
T Consensus 583 dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~---~~~---~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~ 656 (972)
T PRK06149 583 AGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTN---SRF---HYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDL 656 (972)
T ss_pred CCCEEEECCCCccccCCCCHHHHHHHHHHHHhcccc---ccc---cCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHH
Confidence 6788888865421 2 3899999999999974332 122 2367789999999998 46788999999999999
Q ss_pred chhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc--CCccchhH
Q psy16848 91 TLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT--GAICPLKE 168 (514)
Q Consensus 91 ~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 168 (514)
|++... ..++++++|.+++.||.. |...
T Consensus 657 AlklAr----------------------------------------------~~tgr~~ii~~~~~yHG~t~ga~~---- 686 (972)
T PRK06149 657 AIRLAW----------------------------------------------AASGRRDVVSVLEAYHGWTVATDA---- 686 (972)
T ss_pred HHHHHH----------------------------------------------HhcCCCeEEEEeCCCCCcChhHhh----
Confidence 996332 122344555555555410 1000
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC--ceeeecchHHHHhhCCCCEEEecCCC--
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP--EVAIHASMIQGIRNSSAPKIIYRHND-- 244 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~--~v~~~~~~~~~~~~~g~~~~~v~~~d-- 244 (514)
+.+....+. + ....+.+. .++.|..+. ..++.++
T Consensus 687 ---------------------~s~~~~~~~----~-------~~~~~~~~v~~~~~p~~~~----------~~~~~~~~~ 724 (972)
T PRK06149 687 ---------------------VSTSIADNP----Q-------ALETRPDWVHPVESPNTYR----------GRFRGADSA 724 (972)
T ss_pred ---------------------hcCCccccc----c-------ccCCCCCCeEEeCCCcccC----------CcCCCcccH
Confidence 000000000 0 00000000 000011000 0011111
Q ss_pred ---hhHHHHHHhhc--cCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccC
Q psy16848 245 ---VNHLTQVLENM--DVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERD 314 (514)
Q Consensus 245 ---~~~l~~~l~~~--~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~ 314 (514)
.+.+++.++.. ..+++++|++++++...|.+.+ +++|+++|++||+++|+||+++ +|..|+.+.++ +.+
T Consensus 725 ~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~-e~~ 803 (972)
T PRK06149 725 ADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGF-EQQ 803 (972)
T ss_pred HHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhh-hhc
Confidence 23444444432 2356899999999999998888 9999999999999999999996 77776533222 345
Q ss_pred CCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHH
Q psy16848 315 GQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDI 391 (514)
Q Consensus 315 ~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 391 (514)
++ .+|++ +++|++|+ | |++++++++.+.+.... .+..+++.+++.++++.++|+.+.++. +.++.+++
T Consensus 804 gv--~PDiv--t~gK~lg~-G~Pl~av~~~~~i~~~~~~~~-~~~sT~~gnP~~~aaala~L~~i~~e~---l~~~~~~~ 874 (972)
T PRK06149 804 GV--VPDII--TMAKGMGN-GHPLGAVITRREIAEALEAEG-YFFSSTGGSPVSCRIGMAVLDVLREEK---LQENARRV 874 (972)
T ss_pred CC--CCCEE--EecccccC-CeeeEEEEEcHHHHhhhccCC-cccCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHH
Confidence 55 79999 99999986 5 88999999988876421 122245789999999999999987665 77888888
Q ss_pred HHHHHHHHHhC--CCcc---ccCCCcEEEEEeCC--------CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEe
Q psy16848 392 VAYLRNELIQI--GFPV---EHTPSHIIPIKIGN--------PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAP 458 (514)
Q Consensus 392 ~~~l~~~L~~~--g~~~---~~~~~~~~~i~l~~--------~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~ 458 (514)
.+++++.|+++ ..++ +...|.++.+++.. ......+++.++ ++||.+.+.. ...+.+|+.+
T Consensus 875 G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~-~~Gvl~~~~g-----~~~~vl~~~P 948 (972)
T PRK06149 875 GDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLL-ELGVIMQPTG-----DHLNILKIKP 948 (972)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHH-hCCeEEeecC-----CCCCEEEEEC
Confidence 88888888775 2332 34467788887731 122457888886 8999997531 1246899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q psy16848 459 TPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 459 ~~~~t~e~id~~~~~l~~~l~~ 480 (514)
+..+|+++++++++++++++.+
T Consensus 949 pl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 949 PLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCcCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999865
No 190
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.94 E-value=3.1e-24 Score=217.71 Aligned_cols=328 Identities=13% Similarity=0.035 Sum_probs=223.8
Q ss_pred eeeecccC--CCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-cEEEEeccc-cccccchhh
Q psy16848 19 VTCRLSSV--QYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-AGLVFTSCY-VANDSTLFT 94 (514)
Q Consensus 19 ~~~d~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~i~~~sGt-~a~~~~l~~ 94 (514)
..+|++.+ .+..+|.+.+++.+.+... .. |+... ..++++.++++++.+ ..+++++|+ +++..++.+
T Consensus 23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~~-~~-------Y~~~~-~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~ 93 (360)
T PRK07392 23 AILDFSASINPLGPPESVIAAIQSALSAL-RH-------YPDPD-YRELRLALAQHHQLPPEWILPGNGAAELLTWAGRE 93 (360)
T ss_pred cEEEeCCcCCCCCCCHHHHHHHHHHHHHh-hc-------CCCcC-HHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHH
Confidence 46888643 3444678888888766541 11 11112 357888888888643 335566655 455556655
Q ss_pred ccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhh
Q psy16848 95 LGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSH 174 (514)
Q Consensus 95 l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (514)
+. +||.|+++.++|......++..|.+++.++..+.+. +
T Consensus 94 l~---~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---------------------~----------------- 132 (360)
T PRK07392 94 LA---QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQP---------------------S----------------- 132 (360)
T ss_pred hC---CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccC---------------------C-----------------
Confidence 43 788999999999999988888888777654311000 0
Q ss_pred hcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhh
Q psy16848 175 QHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLEN 254 (514)
Q Consensus 175 ~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~ 254 (514)
..+...+++..+.
T Consensus 133 -------------------------------------------------------------------~~~~~~~~~~~~~ 145 (360)
T PRK07392 133 -------------------------------------------------------------------PGLTLRLQTLPPQ 145 (360)
T ss_pred -------------------------------------------------------------------cccccCHHHHHHh
Confidence 0000112222222
Q ss_pred ccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCC
Q psy16848 255 MDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI 334 (514)
Q Consensus 255 ~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~ 334 (514)
.++++++++++||||||.+++.++|.++++++++ +|+||+|..........++..... ..+..++++||||.+|.+
T Consensus 146 --~~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~-~~~~vi~i~S~SK~~~l~ 221 (360)
T PRK07392 146 --LTPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLA-EYPNLIILRSLTKFYSLP 221 (360)
T ss_pred --ccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhh-cCCCEEEEEechhhhcCC
Confidence 1357899999999999999999999999999985 666999994432211112111111 224689999999999976
Q ss_pred C---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccCC
Q psy16848 335 G---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHTP 410 (514)
Q Consensus 335 G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 410 (514)
| ||+++++++++.+...... .+.+.+.+.++.++++. ....+..++.++++++++.+.|+++ ++.+.++.
T Consensus 222 GlRiG~~v~~~~~~~~~~~~~~~----~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~ 295 (360)
T PRK07392 222 GLRLGYAIAHPDRLQRWQQWRDP----WPVNGLAAAAAIAALAD--RDFQQQTWAWLPPAREALFQGLASLPGLTPLPSA 295 (360)
T ss_pred chheeeeeCCHHHHHHHHhhCCC----CCCCHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCC
Confidence 8 9999999998888755432 25788888888888763 2344556677888899999999887 77665555
Q ss_pred CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 411 SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 411 ~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
+.+++++++. +..++++.+++++||.+.++..+. ..+.+++|++++ +.++.+++.+.+++++.
T Consensus 296 ~~fl~~~~~~--~~~~l~~~ll~~~gv~v~pg~~f~-~~~~~~iRi~~~---~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 296 ANFLLVQSQG--SALQLQEKLLQQHRILIRDCLSFP-ELGDRYFRVAVR---TEAENQRLLEALAAILA 358 (360)
T ss_pred CCEEEEEcCC--CHHHHHHHHHhhCCEEEEeCCCCC-CCCCCEEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 6677777654 467888887667899999998653 334679999998 57777888888877654
No 191
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=1.3e-24 Score=221.73 Aligned_cols=334 Identities=19% Similarity=0.147 Sum_probs=220.3
Q ss_pred cCCceeeecccCC-CC---CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-cEEEEeccccccc
Q psy16848 15 KSNRVTCRLSSVQ-YK---VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-AGLVFTSCYVAND 89 (514)
Q Consensus 15 ~~g~~~~d~~~~~-~~---~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~i~~~sGt~a~~ 89 (514)
.+|++++|+.++. +. .||++.+++.++++++.... +. ...+...++.+.+... .+ .++|++|||+|+.
T Consensus 26 ~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~~~--~~---~~~~~~~~la~~l~~~--~~~~~~~~~SGseA~~ 98 (375)
T PRK04260 26 TDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWHSP--NL---YLNSLQEEVAQKLIGD--KDYLAFFCNSGAEANE 98 (375)
T ss_pred CCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCccc--Cc---cCCHHHHHHHHHHhcC--cCCEEEEcCccHHHHH
Confidence 3778889996653 22 38999999999998754321 11 1123334444433321 12 3578899999999
Q ss_pred cchhhcccc-CCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 90 STLFTLGKM-IPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 90 ~~l~~l~~~-~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
.++..+... ++...|..+..+|.++..+++..+.+...-.. .+.
T Consensus 99 ~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~----------------~~~------------------- 143 (375)
T PRK04260 99 AAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGF----------------GDG------------------- 143 (375)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCC----------------CCC-------------------
Confidence 998876432 23445556778888888777665543210000 000
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
-..+...+.+|++.+
T Consensus 144 -----------------------------------------------------------------~~~~~~~~~~dl~~l 158 (375)
T PRK04260 144 -----------------------------------------------------------------VPHFSYAIFNDLNSV 158 (375)
T ss_pred -----------------------------------------------------------------CCCeEEeCCCCHHHH
Confidence 001122234577777
Q ss_pred HHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCc-cccCCCccCceEE
Q psy16848 249 TQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGI-GERDGQLHNMDII 323 (514)
Q Consensus 249 ~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~-~~~~~~~~~~di~ 323 (514)
++.+. ++++++++++++|++|...+ ++++.++|+++|+++|+||+|+ | +++.+.++ ....+. .+|++
T Consensus 159 ~~~l~----~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g-~g~~g~~~~~~~~~~--~pdi~ 230 (375)
T PRK04260 159 KALVN----KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT-G-MGRTGKLYAFEHYGI--EPDIF 230 (375)
T ss_pred HHhcC----CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCcccchhhhHhhCC--CCCEE
Confidence 76663 45789999999999999876 8999999999999999999997 3 23333222 123333 67877
Q ss_pred EcCCcccccC--CCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhch-HHHHHHHHHHHHHHHHHHHH
Q psy16848 324 SGTLGKAFGN--IGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQE-GVELRAKHQDIVAYLRNELI 400 (514)
Q Consensus 324 ~~S~sK~lg~--~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~L~ 400 (514)
||||++++ +.|++++++++.+.+....... +.+.+++.++++.++++.+..+. .++.++..+.+++.+.+.+.
T Consensus 231 --t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~--t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 306 (375)
T PRK04260 231 --TLAKGLANGVPVGAMLAKSSLGGAFGYGSHGS--TFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQ 306 (375)
T ss_pred --EecccccCCcceEEEEEcHHHHhhcCCCCCCC--CCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999986 1299999999888776433333 44678999999999998875333 23333444444444444444
Q ss_pred hCC-CccccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 401 QIG-FPVEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 401 ~~g-~~~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
+.+ +..+...+.++++++.. ...++.+.+. ++||.+.+. +.+.+|++++..++++|+++++++++++
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~l~-~~Gi~v~~~-------~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 307 DKETVTTVRGLGYMIGIETTA--DLSQLVEAAR-DKGLIVLTA-------GTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred hCCCeeEEeccceEEEEEecC--cHHHHHHHHH-hCCCEEecC-------CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 432 22233467788888743 3678999995 899998642 3468999999999999999999999875
No 192
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.94 E-value=6.5e-25 Score=226.75 Aligned_cols=218 Identities=21% Similarity=0.254 Sum_probs=160.0
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCcc
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLH 318 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~ 318 (514)
+++.+++.+.+. .+++++|++++++...|.+.+ +++|+++|++||+++|.||+++ +|+.|..+ ..+..++
T Consensus 211 ~~~~~~~~i~~~-~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~--a~~~~gv-- 285 (443)
T PRK08297 211 ALAQARAAFERH-PHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAW--AYQQLGV-- 285 (443)
T ss_pred HHHHHHHHHHhC-CCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHH--HHHhcCC--
Confidence 455566666643 457999999999999998765 8999999999999999999998 55554321 1233444
Q ss_pred CceEEEcCCcccccCCCeEEEecHHHHHHHHh-h--cCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy16848 319 NMDIISGTLGKAFGNIGGYIVGTKNFIDTIRS-Y--AAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYL 395 (514)
Q Consensus 319 ~~di~~~S~sK~lg~~GG~l~~~~~~~~~l~~-~--~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 395 (514)
.+|++ +++|.++. ||++.+++ +.+.... . ......+++.+++.++++.++|+.+.++. +.++.+++.+++
T Consensus 286 ~PDiv--~~gK~l~~-~a~l~~~~-i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l 358 (443)
T PRK08297 286 RPDIV--AFGKKTQV-CGIMAGRR-VDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDG---LVENAARQGEYL 358 (443)
T ss_pred CCCEE--Eecccccc-cceecchH-HHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHH
Confidence 79999 79999965 66665543 2222111 1 11122245789999999999999886554 777788888888
Q ss_pred HHHHHhC--CCc----cccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHH
Q psy16848 396 RNELIQI--GFP----VEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDK 469 (514)
Q Consensus 396 ~~~L~~~--g~~----~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~ 469 (514)
.+.|+++ .++ .+...|.++.+++.+......+.+.++ ++||.+.+. +...+|+.++..+|++|+++
T Consensus 359 ~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~l~-~~Gvl~~~~-------~~~~lr~~P~l~~t~~eid~ 430 (443)
T PRK08297 359 LARLEELAAEFPAVVSNVRGRGLMCAFDLPTTADRDEVIRRLW-EEGVLVLPC-------GERSIRFRPALTVTTEEIDA 430 (443)
T ss_pred HHHHHHHHHHCCCcceeeeccceEEEEEecCHHHHHHHHHHHH-HCCEEEecC-------CCCeEEEECCccCCHHHHHH
Confidence 8888765 222 234567788888876445668888996 899998642 23579999999999999999
Q ss_pred HHHHHHHHHHHc
Q psy16848 470 FVTDLLAVWKSL 481 (514)
Q Consensus 470 ~~~~l~~~l~~~ 481 (514)
++++++++++++
T Consensus 431 ~l~~l~~~l~~~ 442 (443)
T PRK08297 431 AIDALRRALPEV 442 (443)
T ss_pred HHHHHHHHHHhh
Confidence 999999998764
No 193
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=2.9e-24 Score=217.54 Aligned_cols=207 Identities=13% Similarity=0.084 Sum_probs=155.7
Q ss_pred CCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC
Q psy16848 257 VKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN 333 (514)
Q Consensus 257 ~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~ 333 (514)
.++++++++++|+||||.+++ +++|.++|+++++++|+||+|....... ....+... ..+.+++++||||++|.
T Consensus 140 ~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~-~~~~~i~~~S~SK~~~~ 216 (356)
T PRK08056 140 TPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDE--TGFIPQLA-DNPHLWVLRSLTKFYAI 216 (356)
T ss_pred cCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcc--hHHHHHhc-cCCCEEEEEechhhccC
Confidence 367899999999999999999 7889999999999999999998332211 11111111 22578999999999997
Q ss_pred CC---eEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcccc
Q psy16848 334 IG---GYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEH 408 (514)
Q Consensus 334 ~G---G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 408 (514)
+| ||+++ ++++++.+......+ +.+...+.++...++ ......+.++.++++++++.+.|+++ ++.+.+
T Consensus 217 ~G~RiG~~v~~~~~~~~~l~~~~~~~----~~~~~~~~~a~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 290 (356)
T PRK08056 217 PGLRLGYLVNSDDAAVARMRRQQMPW----SINAFAALAGEVILQ--DRAYQQATWQWLAEEGARFYQALCALPLLTVWP 290 (356)
T ss_pred cchhheeeecCCHHHHHHHHHhCCCC----chhHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcC
Confidence 78 99987 467777776543322 456666666666664 23345667888899999999999887 766666
Q ss_pred CCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 409 TPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 409 ~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
+.+.++++.++. +..++++.|+ ++||.+.++..+. ....+++|++++ +.++.++++++|+++++
T Consensus 291 ~~~~~~~~~~~~--~~~~~~~~l~-~~gI~v~~~~~f~-~~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 291 GRANYLFLRCER--PDIDLQRALL-TQRILIRSCANYP-GLDSRYYRVAIR---SAAENERLLAALRNVLT 354 (356)
T ss_pred CCCcEEEEEcCC--ChHHHHHHHH-HCCeEEEECCCCC-CCCCCEEEEEEc---CHHHHHHHHHHHHHHHc
Confidence 677788887763 2568999996 8999999988542 234579999998 78999999999988753
No 194
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.94 E-value=1.2e-24 Score=225.22 Aligned_cols=233 Identities=12% Similarity=0.069 Sum_probs=168.9
Q ss_pred ChhHHHHHHhhc--cCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC-CCCCccccC---
Q psy16848 244 DVNHLTQVLENM--DVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE-HGAGIGERD--- 314 (514)
Q Consensus 244 d~~~l~~~l~~~--~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~-~~~~~~~~~--- 314 (514)
+.+.+++.+++. ...+++++++++|+||||.+++ +++|.++|++|++++|+||+|....++. ...++.+..
T Consensus 183 ~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~ 262 (447)
T PLN02607 183 TPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEAR 262 (447)
T ss_pred CHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhc
Confidence 455666666543 2346889999999999999999 7999999999999999999999544332 222222110
Q ss_pred C-Cc-cCceEEEcCCcccccCCC---eEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHh--hhchHHHHHH
Q psy16848 315 G-QL-HNMDIISGTLGKAFGNIG---GYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRIL--SSQEGVELRA 386 (514)
Q Consensus 315 ~-~~-~~~di~~~S~sK~lg~~G---G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~ 386 (514)
+ .. .+..+++.||||.+|.+| ||+++ +++++..+...... + ..|.+.+.++...|+.. .+..+.+.++
T Consensus 263 ~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~---~-~~s~~~q~~~~~~L~d~~~~~~~l~~~r~ 338 (447)
T PLN02607 263 GYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSF---T-LVSSQTQHLLASMLSDEEFTENYIRTNRE 338 (447)
T ss_pred CCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhc---C-CCCHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 0 01 356788999999999778 99998 56676766544321 1 34666777777766531 1245667888
Q ss_pred HHHHHHHHHHHHHHhCCCccccCCC-cEEEEEeCCC------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeC
Q psy16848 387 KHQDIVAYLRNELIQIGFPVEHTPS-HIIPIKIGNP------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPT 459 (514)
Q Consensus 387 ~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~i~l~~~------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~ 459 (514)
+++++++.+.+.|++.|+++..+.+ .++++.++.. ....++.++++++.||.+.||..|.. ..++++|++++
T Consensus 339 ~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~-~~~g~fRi~fa 417 (447)
T PLN02607 339 RLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHC-SEPGWFRVCFA 417 (447)
T ss_pred HHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCC-CCCCEEEEEec
Confidence 8999999999999999988777654 4777887532 12346777887568999999987543 34789999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 460 PFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 460 ~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
. .+++++++++++|.+++++.+
T Consensus 418 ~-~~~~~l~~gl~Ri~~~l~~~~ 439 (447)
T PLN02607 418 N-MSEDTLEVALKRIHRFMDRRK 439 (447)
T ss_pred c-CCHHHHHHHHHHHHHHHHHHH
Confidence 3 468999999999999987653
No 195
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.6e-24 Score=219.67 Aligned_cols=322 Identities=16% Similarity=0.151 Sum_probs=228.1
Q ss_pred Cceeeeccc--CCCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC--cEEEEeccccc-cccc
Q psy16848 17 NRVTCRLSS--VQYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE--AGLVFTSCYVA-NDST 91 (514)
Q Consensus 17 g~~~~d~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~~i~~~sGt~a-~~~~ 91 (514)
+..++|++. +.|..+|++++++.+.+..... ..+ +. ....++++.++++++.+ ..+++++|++. +..+
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y----~~-~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~ 97 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLAEVAL--NRY----PD-PRAAALKAALRAAMGVPAGADVLLGNGSDELIQLL 97 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhhcccc--ccC----CC-CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHH
Confidence 345777743 4444578999999988764221 111 11 12478889999998854 25777777754 5556
Q ss_pred hhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhh
Q psy16848 92 LFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCE 171 (514)
Q Consensus 92 l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (514)
+.++.. +||.|+++.++|......++..|++++.++.++.
T Consensus 98 ~~~~~~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~-------------------------------------- 137 (356)
T PRK04870 98 ALACAK--PGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTAD-------------------------------------- 137 (356)
T ss_pred HHHhcC--CCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCC--------------------------------------
Confidence 656655 9999999999999888777777777665543100
Q ss_pred hhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHH
Q psy16848 172 VSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQV 251 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~ 251 (514)
. ..|.+.+++.
T Consensus 138 ------------------------~---------------------------------------------~~d~~~l~~~ 148 (356)
T PRK04870 138 ------------------------F---------------------------------------------TLDLPAMLAA 148 (356)
T ss_pred ------------------------C---------------------------------------------CCCHHHHHHH
Confidence 0 0134444444
Q ss_pred HhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccc
Q psy16848 252 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 252 l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l 331 (514)
+.. .+++++++++|+||||.+++.+++.++++..++++|+||+|..... ... ..... ..+..+++.|||| +
T Consensus 149 ~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~-~~~--~~~~~--~~~~vi~~~S~SK-~ 219 (356)
T PRK04870 149 IAE---HRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAG-DSW--LPRLA--RFPNLLVMRTVSK-L 219 (356)
T ss_pred hhc---CCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcC-cch--HHHHh--hCCCEEEEecchh-h
Confidence 432 3578999999999999999988888887777899999999973221 110 11111 2246899999999 7
Q ss_pred cCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc
Q psy16848 332 GNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE 407 (514)
Q Consensus 332 g~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 407 (514)
+.+| ||+++++++++.+......+ +.+.+.+.++..+++.. +.+++.+++++++++++.+.|+++ ++.+.
T Consensus 220 ~~~GlRiG~~i~~~~~i~~~~~~~~~~----~~~~~~q~~a~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 293 (356)
T PRK04870 220 GLAGLRLGYLAGHPAWIAELDKVRPPY----NVNVLTQATALFALEHV--DVLDAQAAQLRAERTRLAAALAALPGVTVF 293 (356)
T ss_pred hhHHHhhhhhhCCHHHHHHHHHccCCC----cCCHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEEC
Confidence 7767 99999999999887755333 45667777777766532 346677888899999999999987 77665
Q ss_pred cCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 408 HTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 408 ~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
++.+.++++.++ +..++.+.| +++||.+.++..+. ....+++|++++ +.+++++++++|+++
T Consensus 294 ~~~~~~~~~~~~---~~~~~~~~l-~~~gI~v~~~~~f~-~~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 294 PSAANFILVRVP---DAAAVFDGL-KTRGVLVKNLSGMH-PLLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred CCCCeEEEEECC---CHHHHHHHH-HHCCEEEEECCCCC-CCCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 666778888876 356788888 59999999887542 334679999999 799999999999875
No 196
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.94 E-value=4.3e-24 Score=215.62 Aligned_cols=327 Identities=19% Similarity=0.163 Sum_probs=221.0
Q ss_pred CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC----CCcEEEEeccccccccchhhccccCCCce
Q psy16848 28 YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ----KEAGLVFTSCYVANDSTLFTLGKMIPGLH 103 (514)
Q Consensus 28 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~~~i~~~sGt~a~~~~l~~l~~~~~gd~ 103 (514)
+..+|.+.+.+.+ .........+....+..++.+.+++.+...++ .+..+++++||+++..++.++.+ +||+
T Consensus 10 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--~g~~ 85 (350)
T cd00609 10 FPPPPEVLEALAA--AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN--PGDE 85 (350)
T ss_pred CCCCHHHHHHHHH--HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCC--CCCE
Confidence 3346776666655 22222222222333444444445444444433 33466677778888888888865 8999
Q ss_pred EEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEee
Q psy16848 104 YISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVD 183 (514)
Q Consensus 104 v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (514)
|+++.+.|.+...+++..+.+++.++..+..
T Consensus 86 vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------------------------------------------------- 116 (350)
T cd00609 86 VLVPDPTYPGYEAAARLAGAEVVPVPLDEEG------------------------------------------------- 116 (350)
T ss_pred EEEcCCCchhHHHHHHHCCCEEEEEeccccc-------------------------------------------------
Confidence 9999999999988887777666554432100
Q ss_pred ccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEE
Q psy16848 184 EVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLV 263 (514)
Q Consensus 184 ~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v 263 (514)
.....++.++....++++++
T Consensus 117 ------------------------------------------------------------~~~~~~~~~~~~~~~~~~~v 136 (350)
T cd00609 117 ------------------------------------------------------------GFLLDLELLEAAKTPKTKLL 136 (350)
T ss_pred ------------------------------------------------------------CCccCHHHHHhhcCccceEE
Confidence 01100223333445678999
Q ss_pred EEecCCCCCccccCH---HHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC---eE
Q psy16848 264 AFETVHSMTGAICPL---KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GY 337 (514)
Q Consensus 264 v~~~~~nptG~~~~l---~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~ 337 (514)
++++++||+|..+|. .+|.++|+++|+++|+|++|+.+..+....... ......+.|++++|++|+++..| |+
T Consensus 137 ~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~K~~~~~g~~~G~ 215 (350)
T cd00609 137 YLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPAL-ALLDAYERVIVLRSFSKTFGLPGLRIGY 215 (350)
T ss_pred EEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccc-cCcCccCcEEEEeecccccCCcccceEE
Confidence 999999999999994 555689999999999999999544432221100 11113467999999999998434 89
Q ss_pred EEecH-HHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCcc--ccCCCcEE
Q psy16848 338 IVGTK-NFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPV--EHTPSHII 414 (514)
Q Consensus 338 l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~~~ 414 (514)
+++++ ++.+.+....... +.+.+...+.++...++... ...++.+++++++++++.+.|++.+... ....+.++
T Consensus 216 i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~ 292 (350)
T cd00609 216 LIAPPEELLERLKKLLPYT--TSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFL 292 (350)
T ss_pred EecCHHHHHHHHHHHHHhc--ccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEE
Confidence 99888 7888887665443 33567777777777777543 5677888999999999999999985443 23345566
Q ss_pred EEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q psy16848 415 PIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLL 475 (514)
Q Consensus 415 ~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~ 475 (514)
++.++.......+.+.| +++||.+.++..+.. ....++|++++.. .+|+++++++|+
T Consensus 293 ~~~~~~~~~~~~~~~~l-~~~gi~i~~~~~~~~-~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 293 WLDLPEGDDEEFLERLL-LEAGVVVRPGSAFGE-GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred EEecCCCChHHHHHHHH-HhCCEEEeccccccc-CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 77776543444555555 588999987765432 4567999999965 999999999886
No 197
>PLN02651 cysteine desulfurase
Probab=99.94 E-value=6.2e-25 Score=223.18 Aligned_cols=316 Identities=17% Similarity=0.108 Sum_probs=219.0
Q ss_pred ChhHHHHHHHHHHH-hCCCCC-CcCcccCcchHHHHHHHHHHhHcCCC--cEEEEeccccccccchhhccc--cCCCceE
Q psy16848 31 PKGGRKCLGEALEK-FGTGAG-GTRNISGNSLFHEKLEEDVAKLHQKE--AGLVFTSCYVANDSTLFTLGK--MIPGLHY 104 (514)
Q Consensus 31 ~~~~~~a~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~la~~~~~~--~~i~~~sGt~a~~~~l~~l~~--~~~gd~v 104 (514)
++.+.+++.+.+.. ++.... .+.......+..+++++.+++++|.+ ..+|++|+|+++..++..+.. ..+||.|
T Consensus 12 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~v 91 (364)
T PLN02651 12 DPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHV 91 (364)
T ss_pred CHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEE
Confidence 57889999888865 222211 11111122466788999999999865 346666677887777655421 2489999
Q ss_pred EecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeec
Q psy16848 105 ISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDE 184 (514)
Q Consensus 105 ~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (514)
+++..+|+++...+..
T Consensus 92 l~~~~~h~s~~~~~~~---------------------------------------------------------------- 107 (364)
T PLN02651 92 ITTQTEHKCVLDSCRH---------------------------------------------------------------- 107 (364)
T ss_pred EEcccccHHHHHHHHH----------------------------------------------------------------
Confidence 9999999987643321
Q ss_pred cccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-CChhHHHHHHhhccCCCceEE
Q psy16848 185 VHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-NDVNHLTQVLENMDVKIPKLV 263 (514)
Q Consensus 185 ~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~~~~~v 263 (514)
+...|.+++.++. .+.....+.+++..+++++++
T Consensus 108 ---------------------------------------------~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv 142 (364)
T PLN02651 108 ---------------------------------------------LQQEGFEVTYLPVKSDGLVDLDELAAAIRPDTALV 142 (364)
T ss_pred ---------------------------------------------HHhcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEE
Confidence 1112333333331 111122233333334568999
Q ss_pred EEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-eEEEecH
Q psy16848 264 AFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG-GYIVGTK 342 (514)
Q Consensus 264 v~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G-G~l~~~~ 342 (514)
++++++|+||.+.|+++|.++|+++|+++++|++++.|.. +.+....++|++++|.||++|+.| |+++.++
T Consensus 143 ~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~--------~~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~ 214 (364)
T PLN02651 143 SVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKI--------PVDVDDLGVDLMSISGHKIYGPKGVGALYVRR 214 (364)
T ss_pred EEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCc--------ccCcccCCCCEEEechhhhCCCCceEEEEEcC
Confidence 9999999999999999999999999999999999997654 222223478999999999888777 9998887
Q ss_pred HHHHHHHhhcCce-----EeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh-C-CCccccC---C--
Q psy16848 343 NFIDTIRSYAAGF-----IFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQ-I-GFPVEHT---P-- 410 (514)
Q Consensus 343 ~~~~~l~~~~~~~-----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~---~-- 410 (514)
+..+.+.+...+. ....+.+.....++.++++++.+ ..++++++.+++.+++.+.|++ . ++.+..+ .
T Consensus 215 ~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~ 293 (364)
T PLN02651 215 RPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKR 293 (364)
T ss_pred CCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccC
Confidence 6655544332211 01235677778888999998854 5588889999999999999986 3 7766553 1
Q ss_pred -CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCC----------------CCcEEEEEeCCCCCHHHHH
Q psy16848 411 -SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPV----------------GEEKIRLAPTPFHTREMID 468 (514)
Q Consensus 411 -~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~----------------~~~~iRl~~~~~~t~e~id 468 (514)
.+++.+.++. .+..++...|. + |.++.+..|..+. ..+.+|+|++.++|++|||
T Consensus 294 ~~~i~~~~~~~-~~~~~~~~~L~-~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 294 YPGTLNLSFAY-VEGESLLMGLK-E--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred cCCEEEEEeCC-CCHHHHHHHhC-C--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 2377777764 45778888883 4 9999888765431 1369999999999999985
No 198
>PRK06148 hypothetical protein; Provisional
Probab=99.94 E-value=1.3e-24 Score=244.12 Aligned_cols=348 Identities=18% Similarity=0.179 Sum_probs=235.7
Q ss_pred CCceeeecccCC-CCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccccc
Q psy16848 16 SNRVTCRLSSVQ-YKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVANDS 90 (514)
Q Consensus 16 ~g~~~~d~~~~~-~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~~~ 90 (514)
+|+.|+||.++. .+| ||+|.+++.+|+.+..... .+ ..+...++.+++++.+. .+.++|++|||+|++.
T Consensus 622 dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~---~~---~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~ 695 (1013)
T PRK06148 622 RGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNT---RY---LHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSL 695 (1013)
T ss_pred CCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcC---Cc---CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHH
Confidence 677777775432 223 8999999999999853221 11 24677889999999874 3678999999999999
Q ss_pred chhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccc--cCCccchhH
Q psy16848 91 TLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSM--TGAICPLKE 168 (514)
Q Consensus 91 ~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 168 (514)
|++.. +..++++++|.+++.||. .+.++...
T Consensus 696 AlklA----------------------------------------------r~~tGr~~ii~~~~~YHG~t~~a~s~s~- 728 (1013)
T PRK06148 696 ALRLA----------------------------------------------RAHTGQRDAIVLDHAYHGTTTELIDLSP- 728 (1013)
T ss_pred HHHHH----------------------------------------------HHhcCCCeEEEEcCCccCCCcchhhcCc-
Confidence 99433 334556667777777761 12111000
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC---ceeeecchHHHHhhCCCCEEEecCC--
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP---EVAIHASMIQGIRNSSAPKIIYRHN-- 243 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~---~v~~~~~~~~~~~~~g~~~~~v~~~-- 243 (514)
. .. ..+.+ ....+ .+..|..+ ..+++
T Consensus 729 ~-~~--------------------~~~~~----------------~~~~~~~~~~~~p~~~------------~~~~~~~ 759 (1013)
T PRK06148 729 Y-KF--------------------NRKGG----------------KGRPDHVEVAEVPDSY------------RGPERWP 759 (1013)
T ss_pred h-hh--------------------cccCC----------------CCCCCCceEcCCCCcc------------ccCCCCC
Confidence 0 00 00000 00000 00011111 01111
Q ss_pred C-------hhHHHHHHhhc--cCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCC
Q psy16848 244 D-------VNHLTQVLENM--DVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAG 309 (514)
Q Consensus 244 d-------~~~l~~~l~~~--~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~ 309 (514)
+ .+.+++.++.. ..+++++|++|+++...|.+.+ +++|+++|++||+++|.||+++ +|+.|....
T Consensus 760 ~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~- 838 (1013)
T PRK06148 760 DAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWW- 838 (1013)
T ss_pred hhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcch-
Confidence 1 13345555432 2356899999999999998887 8999999999999999999997 777764321
Q ss_pred ccccCCCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHH
Q psy16848 310 IGERDGQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRA 386 (514)
Q Consensus 310 ~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 386 (514)
..+.+++ .+||+ +++|++|+ | |.+++++++.+.+.... .+..+++.+++.++++.++|+.+.++. +.+
T Consensus 839 a~e~~gv--~PDiv--t~gK~lgg-G~Plgav~~~~ei~~~~~~g~-~~~~Tf~gnpla~aaa~a~L~~i~~e~---l~~ 909 (1013)
T PRK06148 839 AFETQGV--VPDIV--TMGKPIGN-GHPMGAVVTTREIADSFDNGM-EYFNTFGGNPVSCAIGLAVLDIIEDED---LQR 909 (1013)
T ss_pred hhhhcCC--Cccee--eecccccC-CcceEEEEEcHHHHhhccCCC-ccccCCCCCHHHHHHHHHHHHHHhhcc---HHH
Confidence 2234555 89999 89999987 5 88889999988775432 123366889999999999999987665 778
Q ss_pred HHHHHHHHHHHHHHhC--CCcc---ccCCCcEEEEEeCCC--------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcE
Q psy16848 387 KHQDIVAYLRNELIQI--GFPV---EHTPSHIIPIKIGNP--------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEK 453 (514)
Q Consensus 387 ~~~~~~~~l~~~L~~~--g~~~---~~~~~~~~~i~l~~~--------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~ 453 (514)
+.+++.+++++.|+++ ..++ +...|.++.+++... .....+...++ ++||.+.+.. ...+.
T Consensus 910 ~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g-----~~~~v 983 (1013)
T PRK06148 910 NALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGAR-ERGILIGTEG-----PHDNV 983 (1013)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHH-hCCeEEeccC-----CCCCE
Confidence 8889999999888775 3333 244567888877421 12456778886 8999996421 12478
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 454 IRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 454 iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+|+.++..+|++++|++++++++++.++
T Consensus 984 lr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 984 LKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred EEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998764
No 199
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.94 E-value=2.2e-24 Score=222.29 Aligned_cols=345 Identities=21% Similarity=0.185 Sum_probs=226.5
Q ss_pred eeeec-ccCCCCCChhHHHHHHHHH-HHhCCCCCCcCcccCcc--hHHHH-HHHHHHhHcCCCcE-EEEeccccccccch
Q psy16848 19 VTCRL-SSVQYKVPKGGRKCLGEAL-EKFGTGAGGTRNISGNS--LFHEK-LEEDVAKLHQKEAG-LVFTSCYVANDSTL 92 (514)
Q Consensus 19 ~~~d~-~~~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~--~~~~~-~~~~la~~~~~~~~-i~~~sGt~a~~~~l 92 (514)
+.+++ ++.+++ +|++++++.+.+ .+|+.+.++++...+.. +..++ .++.+++++|.+.. ++++|||+|+..++
T Consensus 20 ~~~~~~~~~~~~-~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a~~~~l 98 (402)
T cd00378 20 ETLELIASENFT-SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQANLAVY 98 (402)
T ss_pred hCeeeeccCCcC-CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHHHHHHH
Confidence 34554 566666 789999998776 46765555555443431 12223 45567889998766 55578999999999
Q ss_pred hhccccCCCceEEecCccchhhhhh-----hhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchh
Q psy16848 93 FTLGKMIPGLHYISDAGNHASMIQG-----IRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK 167 (514)
Q Consensus 93 ~~l~~~~~gd~v~~~~~~h~~~~~~-----~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (514)
.++.+ |||+|+++++.|.+.... ++..|.++..++...
T Consensus 99 ~~l~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----------------------------------- 141 (402)
T cd00378 99 FALLE--PGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGV----------------------------------- 141 (402)
T ss_pred HHhcC--CCCEEEEecCccCccccccccccccccceeEEEecCCc-----------------------------------
Confidence 99876 999999999998766432 222332222111000
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH 247 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~ 247 (514)
+ ..+ ..-|++.
T Consensus 142 ---------------~---------~~~---------------------------------------------~~id~~~ 152 (402)
T cd00378 142 ---------------D---------PET---------------------------------------------GLIDYDA 152 (402)
T ss_pred ---------------C---------ccc---------------------------------------------CCcCHHH
Confidence 0 000 0115566
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCC
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTL 327 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~ 327 (514)
+++.+.+ ++++++++++++|+ ...++++|.++|+++|+++|+|++|..|..+... .. . ... ..|++++|+
T Consensus 153 l~~~i~~---~~~~~v~~~~~~~~--~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~--~~-~-~~~-~~dv~~~s~ 222 (402)
T cd00378 153 LEKMALE---FKPKLIVAGASAYP--RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGV--FP-N-PLP-GADVVTTTT 222 (402)
T ss_pred HHHHHHh---CCCCEEEecCcccC--CCcCHHHHHHHHHhcCCEEEEEccchhhhhhccc--CC-C-ccc-CCcEEEecc
Confidence 6665542 34778888777654 5678999999999999999999998755432111 01 0 112 468999999
Q ss_pred cccc-cCCCeEEEecH-HHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCc
Q psy16848 328 GKAF-GNIGGYIVGTK-NFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFP 405 (514)
Q Consensus 328 sK~l-g~~GG~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 405 (514)
||++ |+.||+++.++ ++.+.+........++ +.+....+++..++........++.+++++++++++.+.|++.|+.
T Consensus 223 sK~l~G~~gg~i~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 301 (402)
T cd00378 223 HKTLRGPRGGLILTRKGELAKKINSAVFPGLQG-GPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFK 301 (402)
T ss_pred ccCCCCCCceEEEeccHHHHHHHHHHhCccccC-CchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 9999 55668888776 8888887654333222 2223334444444544433356678888999999999999998887
Q ss_pred ccc--CCCcEEEEEeCC-CccHHHHHHHHHHhCCeEEecccCCCCC---CCCcEEEEEeCC----CCCHHHHHHHHHHHH
Q psy16848 406 VEH--TPSHIIPIKIGN-PALNTKICDMLLKEKGHYVQPINYPTVP---VGEEKIRLAPTP----FHTREMIDKFVTDLL 475 (514)
Q Consensus 406 ~~~--~~~~~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~~~~~~~~~---~~~~~iRl~~~~----~~t~e~id~~~~~l~ 475 (514)
+.. ..++++++.+++ ......+.+.| +++||.+.+..+|..+ ....++|++++. .++++|++.+++.|+
T Consensus 302 ~~~~~~~~~~v~v~~~~~~~~~~~~~~~l-~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~ 380 (402)
T cd00378 302 VVSGGTDNHLVLVDLRPKGITGKAAEDAL-EEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIA 380 (402)
T ss_pred EeecCCCCeEEEEeCCccCCCHHHHHHHH-HHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHH
Confidence 642 345677788763 23345666666 6899999876555442 245789998875 357999999999999
Q ss_pred HHHHHcC
Q psy16848 476 AVWKSLD 482 (514)
Q Consensus 476 ~~l~~~~ 482 (514)
+++++-.
T Consensus 381 ~~~~~~~ 387 (402)
T cd00378 381 RALKDAE 387 (402)
T ss_pred HHHhccc
Confidence 9887644
No 200
>PRK07908 hypothetical protein; Provisional
Probab=99.94 E-value=3.4e-24 Score=216.55 Aligned_cols=319 Identities=15% Similarity=0.126 Sum_probs=217.1
Q ss_pred CCceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-cEEEEeccc-cccccc
Q psy16848 16 SNRVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-AGLVFTSCY-VANDST 91 (514)
Q Consensus 16 ~g~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~i~~~sGt-~a~~~~ 91 (514)
.+..++|+..+. +..++.+.+++.+.+.... . |+......++++.++++++.+ ..|++++|+ +++..+
T Consensus 20 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~-------Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~ 91 (349)
T PRK07908 20 AGPGLLDFAVNVRHDTPPEWLRERLAARLGDLA-A-------YPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALL 91 (349)
T ss_pred CCCCeEEecCCCCCCCCCHHHHHHHHHHhhHhh-c-------CCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHH
Confidence 345688986544 5557789999988776421 1 111233567888888888743 345566655 555555
Q ss_pred hhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhh
Q psy16848 92 LFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCE 171 (514)
Q Consensus 92 l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (514)
+. .. +++ +++..++|......++..|.+++.++.++
T Consensus 92 ~~--l~--~~~-viv~~P~y~~~~~~~~~~G~~i~~v~~~~--------------------------------------- 127 (349)
T PRK07908 92 AR--LR--PRR-AAVVHPSFTEPEAALRAAGIPVHRVVLDP--------------------------------------- 127 (349)
T ss_pred Hh--cC--CCe-EEEeCCCChHHHHHHHHcCCEEEeeccCc---------------------------------------
Confidence 44 33 655 45567777776666666666655443210
Q ss_pred hhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHH
Q psy16848 172 VSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQV 251 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~ 251 (514)
++....+.
T Consensus 128 ------------------------------------------------------------------------~~~~d~~~ 135 (349)
T PRK07908 128 ------------------------------------------------------------------------PFRLDPAA 135 (349)
T ss_pred ------------------------------------------------------------------------ccCcChhH
Confidence 11111112
Q ss_pred HhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccc
Q psy16848 252 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 252 l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l 331 (514)
+ .++++++++++|+||||.+++.++|.++|+ ++.++|+||+|.....+. ..++.. ...+..++++||||.+
T Consensus 136 l----~~~~~~i~l~np~NPTG~~~~~~~l~~l~~-~~~~iIvDe~y~~~~~~~-~~~l~~---~~~~~~i~i~S~SK~~ 206 (349)
T PRK07908 136 V----PDDADLVVIGNPTNPTSVLHPAEQLLALRR-PGRILVVDEAFADAVPGE-PESLAG---DDLPGVLVLRSLTKTW 206 (349)
T ss_pred h----ccCCCEEEEcCCCCCCCCCcCHHHHHHHHh-cCCEEEEECcchhhccCC-cccccc---ccCCCEEEEeeccccc
Confidence 2 235789999999999999999999999996 588899999998433222 111211 1224578899999999
Q ss_pred cCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCcccc
Q psy16848 332 GNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEH 408 (514)
Q Consensus 332 g~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 408 (514)
+.+| ||+++++++++.+......+ ..+...+.++...++.....++++.+++++++++++.+.|++.++.+..
T Consensus 207 ~l~GlRiG~~~~~~~~~~~~~~~~~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 282 (349)
T PRK07908 207 SLAGLRVGYALGAPDVLARLTRGRAHW----PVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVD 282 (349)
T ss_pred CCccceeeeeecCHHHHHHHHhcCCCC----CccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEecc
Confidence 9667 99999999999887765443 3455555555444431112356678888999999999999988877665
Q ss_pred -CCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 409 -TPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 409 -~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
+.+.++++.+++ ..++.+.| +++||.+.++..+. ..+.+++|++++ +++++++++++|++++.
T Consensus 283 p~~g~~~~~~~~~---~~~~~~~l-~~~gI~v~~g~~f~-~~~~~~vRis~~---~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 283 PAAAPFVLVRVPD---AELLRKRL-RERGIAVRRGDTFP-GLDPDYLRLAVR---PRAEVPVLVQALAEILK 346 (349)
T ss_pred CCCceEEEEECCc---HHHHHHHH-HhCCEEEEECCCCC-CCCCCeEEEEeC---CCccHHHHHHHHHHHHh
Confidence 456688888774 45777777 59999999988643 224679999997 78999999999998765
No 201
>PLN02231 alanine transaminase
Probab=99.94 E-value=6.5e-24 Score=223.46 Aligned_cols=339 Identities=15% Similarity=0.148 Sum_probs=224.4
Q ss_pred hhHHHHHHHHHHHh-CCCCCCcCcccCcchHHHHHHHHHHhHcCC---CcEEEEecc-ccccccchhhccccCCCceEEe
Q psy16848 32 KGGRKCLGEALEKF-GTGAGGTRNISGNSLFHEKLEEDVAKLHQK---EAGLVFTSC-YVANDSTLFTLGKMIPGLHYIS 106 (514)
Q Consensus 32 ~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~---~~~i~~~sG-t~a~~~~l~~l~~~~~gd~v~~ 106 (514)
.++.+...+.+... +.....+....|..++.+.+.+++.+..|. +..|++|+| ++|+..++.++.. .+||.|++
T Consensus 143 ~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~-~~gd~Vli 221 (534)
T PLN02231 143 ADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEKDGILC 221 (534)
T ss_pred HHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhcc-CCCCEEEE
Confidence 35555555555542 222333444556666666666666655442 234555555 5567777777652 37999999
Q ss_pred cCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccc
Q psy16848 107 DAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 186 (514)
Q Consensus 107 ~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (514)
+.+.|......++..|.+++.++.+. +
T Consensus 222 ~~P~Y~~y~~~~~~~g~~~v~~~l~~-~---------------------------------------------------- 248 (534)
T PLN02231 222 PIPQYPLYSASIALHGGTLVPYYLDE-A---------------------------------------------------- 248 (534)
T ss_pred eCCCChhHHHHHHHcCCEEEEEecCc-c----------------------------------------------------
Confidence 99999999988888888877664310 0
Q ss_pred cccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccC--CCceEEE
Q psy16848 187 AVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDV--KIPKLVA 264 (514)
Q Consensus 187 ~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~--~~~~~vv 264 (514)
++++ -|.+.+++.+++... .++++++
T Consensus 249 -------~~~~---------------------------------------------~d~~~Le~~l~~~~~~~~~~k~iv 276 (534)
T PLN02231 249 -------TGWG---------------------------------------------LEISELKKQLEDARSKGITVRALV 276 (534)
T ss_pred -------cCCC---------------------------------------------CCHHHHHHHHHHHhhcCCCeEEEE
Confidence 0011 155666666654322 2578999
Q ss_pred EecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccC--CCCCCccccC---CC--ccCceEEEcCCcccc-cC
Q psy16848 265 FETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYG--EHGAGIGERD---GQ--LHNMDIISGTLGKAF-GN 333 (514)
Q Consensus 265 ~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g--~~~~~~~~~~---~~--~~~~di~~~S~sK~l-g~ 333 (514)
+++|+||||.+++ +++|+++|++||++||+||+|....+. ....++.... +. .....++++||||.+ |.
T Consensus 277 l~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~ 356 (534)
T PLN02231 277 VINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGE 356 (534)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccC
Confidence 9999999999999 799999999999999999999954432 2222222111 11 012468889999976 55
Q ss_pred CC---eEEEe---cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHH-------hh--hchHHHHHHHHHHHHHHHHHH
Q psy16848 334 IG---GYIVG---TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRI-------LS--SQEGVELRAKHQDIVAYLRNE 398 (514)
Q Consensus 334 ~G---G~l~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~-------~~--~~~~~~~~~~~~~~~~~l~~~ 398 (514)
+| ||+++ ++++++.+.+... . +...+...+.++..+++. +. ..+.+++++.++++++.+.+.
T Consensus 357 pGlRiGy~~~~~~~~~l~~~l~k~~~-~--~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~ 433 (534)
T PLN02231 357 CGKRGGYMEVTGFTSDVREQIYKVAS-V--NLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDA 433 (534)
T ss_pred CccceEEEEEecCCHHHHHHHHHHHh-h--hcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67 99875 6788888876543 2 224455566666665631 11 112334678899999999999
Q ss_pred HHhC-CCccccCCCcEEEE-Ee--CCC----------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCH
Q psy16848 399 LIQI-GFPVEHTPSHIIPI-KI--GNP----------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTR 464 (514)
Q Consensus 399 L~~~-g~~~~~~~~~~~~i-~l--~~~----------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~ 464 (514)
|+++ |+.+..+.|+|+.+ ++ +.. .....++..|+++.||.+.||..+....+..++|+++. .++
T Consensus 434 L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~--~~~ 511 (534)
T PLN02231 434 LNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL--PQE 511 (534)
T ss_pred HhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC--CCH
Confidence 9988 88887787775443 33 321 11234667777788999999997654445668999996 678
Q ss_pred HHHHHHHHHHHHHHHHc
Q psy16848 465 EMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 465 e~id~~~~~l~~~l~~~ 481 (514)
+++++++++|++++++.
T Consensus 512 e~l~eal~RL~~~~~~~ 528 (534)
T PLN02231 512 DKIPAIVSRLTEFHKSF 528 (534)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999887664
No 202
>PLN02721 threonine aldolase
Probab=99.94 E-value=1.9e-24 Score=218.98 Aligned_cols=329 Identities=18% Similarity=0.217 Sum_probs=215.9
Q ss_pred ceeeecccCCCC-CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhcc
Q psy16848 18 RVTCRLSSVQYK-VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLG 96 (514)
Q Consensus 18 ~~~~d~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~ 96 (514)
.+.+||.++... ..|.+.+++.+. ..+. . . .++.+...++++.++++++.+.+++++|||+++..++.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~a~~~~--~~~~--~--~--~~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~ 76 (353)
T PLN02721 5 SRVVDLRSDTVTKPTDAMRAAMANA--EVDD--D--V--LGYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHC 76 (353)
T ss_pred hhhhhhhcccccCCCHHHHHHHHhc--cCCC--c--c--cCCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHc
Confidence 356788665544 356777776543 1111 1 1 12345578999999999999889999999999877776654
Q ss_pred ccCCCceEEecCccchhhhhh---hhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhh
Q psy16848 97 KMIPGLHYISDAGNHASMIQG---IRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVS 173 (514)
Q Consensus 97 ~~~~gd~v~~~~~~h~~~~~~---~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (514)
. .+||.|+++.++|.++... ....|.+++.++.++..
T Consensus 77 ~-~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--------------------------------------- 116 (353)
T PLN02721 77 D-VRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDG--------------------------------------- 116 (353)
T ss_pred c-CCCCeEEEcCccceehhcccchhhhcCceeEecCCCcCC---------------------------------------
Confidence 1 2899999999999776642 33445555444321000
Q ss_pred hhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHh
Q psy16848 174 HQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLE 253 (514)
Q Consensus 174 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~ 253 (514)
..|.+.+++.++
T Consensus 117 --------------------------------------------------------------------~~d~~~l~~~i~ 128 (353)
T PLN02721 117 --------------------------------------------------------------------TMDLDAIEAAIR 128 (353)
T ss_pred --------------------------------------------------------------------CcCHHHHHHHHH
Confidence 014455555554
Q ss_pred hcc---CCCceEEEEecC-CCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcC
Q psy16848 254 NMD---VKIPKLVAFETV-HSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGT 326 (514)
Q Consensus 254 ~~~---~~~~~~vv~~~~-~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S 326 (514)
+.. .+++++++++++ +||+|.++| +++|.++|+++|+++|+|++|.++.....+ . .......+.|.++.|
T Consensus 129 ~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~--~-~~~~~~~~~d~~~~s 205 (353)
T PLN02721 129 PKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALG--V-PVHRLVKAADSVSVC 205 (353)
T ss_pred hccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhC--C-CHHHHhhhCCEEEEe
Confidence 321 146788888774 678999888 789999999999999999998754321111 1 111112257888889
Q ss_pred CcccccCCC-eEEEecHHHHHHHHhhcCceEeccCCcH--HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-
Q psy16848 327 LGKAFGNIG-GYIVGTKNFIDTIRSYAAGFIFTTSLPP--TVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI- 402 (514)
Q Consensus 327 ~sK~lg~~G-G~l~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 402 (514)
+||+++++. ++++.++++++.+......+ ....+. ..++++..+++.. .+ ..++..++.+++.+.|+++
T Consensus 206 ~sK~l~~~~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~----~~-~~~~~~~~~~~l~~~L~~~~ 278 (353)
T PLN02721 206 LSKGLGAPVGSVIVGSKSFIRKAKRLRKTL--GGGMRQVGVLAAAALVALQEN----VP-KLEDDHKKAKLLAEGLNQIK 278 (353)
T ss_pred cccccCCceeeEEecCHHHHHhHHHHHHhc--CCCeehhHHHHHHHHHHHHHH----HH-HHHHHHHHHHHHHHHHHhCC
Confidence 999998644 45778888888766544322 112222 2222333333322 22 2334456778899999887
Q ss_pred CCcc--ccCCCcEEEEEeCCC--ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 403 GFPV--EHTPSHIIPIKIGNP--ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 403 g~~~--~~~~~~~~~i~l~~~--~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
++.+ ..+.+++++++++.. ....++++.|. ++||.+.++. ..++|++++..++++|+++++++|++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~gi~v~~~~-------~~~lR~~~~~~~~~~~i~~~~~~l~~~~ 350 (353)
T PLN02721 279 GLRVNVAAVETNIVYFDITDGSRITAEKLCKSLE-EHGVLLMPGN-------SSRIRVVTHHQISDSDVQYTLSCFQQAA 350 (353)
T ss_pred CcEEecCCccceEEEEEccCCccccHHHHHHHHH-hCCcEEecCC-------CceEEEEecCcCCHHHHHHHHHHHHHHh
Confidence 6643 344566788887643 35778999995 9999998652 4589999998899999999999999877
Q ss_pred HH
Q psy16848 479 KS 480 (514)
Q Consensus 479 ~~ 480 (514)
..
T Consensus 351 ~~ 352 (353)
T PLN02721 351 LT 352 (353)
T ss_pred hc
Confidence 54
No 203
>KOG1404|consensus
Probab=99.94 E-value=8.7e-25 Score=208.16 Aligned_cols=340 Identities=18% Similarity=0.162 Sum_probs=240.1
Q ss_pred ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEeccccccccchhhccc-cCCCceEEec
Q psy16848 31 PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVANDSTLFTLGK-MIPGLHYISD 107 (514)
Q Consensus 31 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~~~~l~~l~~-~~~gd~v~~~ 107 (514)
||+|.+++.+|+.++-..... + ..+...++++.|.+.+- .+.++|++||++||+.+++.... ++.-|.|...
T Consensus 68 hP~v~~a~~kQl~~l~H~t~~---~--~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r 142 (442)
T KOG1404|consen 68 HPDVVAAAVKQLKKLYHTTSG---Y--LNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARR 142 (442)
T ss_pred ChHHHHHHHHhhhhhEEeecc---c--cCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEee
Confidence 899999999999764332211 1 23556777777777763 45578889999999998865432 5677888889
Q ss_pred CccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccc
Q psy16848 108 AGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 108 ~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
..+|.....++.+.+...+.++-.- .+.|++++ ++
T Consensus 143 ~~YHG~t~~t~glt~~~~~k~~~~~-------------------~~~~~~~~---~~----------------------- 177 (442)
T KOG1404|consen 143 NSYHGNTLYTLGLTGLSPWKQNFPG-------------------VASGVHHT---MN----------------------- 177 (442)
T ss_pred ccccCCchhhcccccCCcccccCCC-------------------CCCccccc---CC-----------------------
Confidence 9999999988888887776543210 01122221 01
Q ss_pred ccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEec
Q psy16848 188 VGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFET 267 (514)
Q Consensus 188 ~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~ 267 (514)
|++|...+ .|.+--.....-.+.+++.+.....++.++++.++
T Consensus 178 -----------------------------------Pdp~r~~~--~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEt 220 (442)
T KOG1404|consen 178 -----------------------------------PDPYRGIF--GGSNEEEASDRYAKELEDLILYDGPETVAAFIAET 220 (442)
T ss_pred -----------------------------------CCcccccC--CCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeeh
Confidence 11111000 00000000001124455555555556788999999
Q ss_pred CCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCceEEEcCCcccccCCC---eEEE
Q psy16848 268 VHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYIV 339 (514)
Q Consensus 268 ~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~ 339 (514)
++...|.+.+ +++..++|+++|.++|.||+++ +|++| +.+++- ..++ -|||+ |+.|.+|. | |+++
T Consensus 221 IqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~~wgfe-~h~v--~PDIv--TmAKgiGn-G~Pl~AVv 293 (442)
T KOG1404|consen 221 IQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-HMWGFE-SHGV--VPDIV--TMAKGIGN-GFPLGAVV 293 (442)
T ss_pred hccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-cccccc-ccCC--CccHH--HHHhhccC-CCcceeee
Confidence 9999999877 8999999999999999999999 88887 443443 3333 79999 99999988 5 8899
Q ss_pred ecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--CCccc---cCCCcEE
Q psy16848 340 GTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI--GFPVE---HTPSHII 414 (514)
Q Consensus 340 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~---~~~~~~~ 414 (514)
..+++.+.+.+... +.++++.+|..++++.++|+.++++. +.++..+...+|++.|.++ +.+++ +..|.|+
T Consensus 294 tt~EIa~v~~~~~~-~fnTyggnP~a~avg~aVL~Vikee~---LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~ 369 (442)
T KOG1404|consen 294 TTPEIADVLNQKSS-HFNTYGGNPVACAVGLAVLKVIKEEN---LQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLML 369 (442)
T ss_pred cCHHHHHHHHhccc-cccccCCCchhHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEE
Confidence 99999998877653 22366899999999999999997666 7888899999999999887 55554 3456677
Q ss_pred EEEeCCCc---------cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHH
Q psy16848 415 PIKIGNPA---------LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDL 474 (514)
Q Consensus 415 ~i~l~~~~---------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l 474 (514)
.+++-+.. ....+.+.+ ++.|+.+..+.. ..+.+|++++...|++|+|.+++..
T Consensus 370 GvE~V~dk~~~~pp~~~~~~~i~~~c-ke~Gvlvg~g~i-----~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 370 GVELVSDKSEPKPPATAEGAVIGEQC-KELGVLVGKGGI-----HGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred EEEEecccCCCCCcchHHHHHHHHHH-HHhCeeeecccc-----cceEEEecCCeeccHHHHHHHHHHH
Confidence 77764321 234677888 599999954443 2349999999999999998887766
No 204
>PRK09265 aminotransferase AlaT; Validated
Probab=99.94 E-value=7.8e-24 Score=218.11 Aligned_cols=340 Identities=13% Similarity=0.121 Sum_probs=215.1
Q ss_pred hcCCceeeecccCC-----CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHc------CC-CcEEEE
Q psy16848 14 HKSNRVTCRLSSVQ-----YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLH------QK-EAGLVF 81 (514)
Q Consensus 14 ~~~g~~~~d~~~~~-----~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~-~~~i~~ 81 (514)
..+|...+|+..++ +-..+++.+++.+.+... ..+....|. .++++.+++++ +. +..+++
T Consensus 29 ~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~----~~Y~~~~G~----~~lr~~ia~~~~~~~~~~~~~~~i~~ 100 (404)
T PRK09265 29 EEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA----QGYSDSKGL----FSARKAIMQYYQQKGIPDVDVDDIYI 100 (404)
T ss_pred HHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC----CCCCCCCCc----HHHHHHHHHHHhccCCCCCCcccEEE
Confidence 34667788886432 123567777777655431 112222233 35555555554 22 234556
Q ss_pred ecccc-ccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc
Q psy16848 82 TSCYV-ANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT 160 (514)
Q Consensus 82 ~sGt~-a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 160 (514)
++|++ ++..++.++.. +||.|+++.++|......++..|.+++.++.+..+ .|
T Consensus 101 t~G~~~~l~~~~~~~~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~---------------------~~--- 154 (404)
T PRK09265 101 GNGVSELIVMAMQALLN--NGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEA---------------------GW--- 154 (404)
T ss_pred eCChHHHHHHHHHHhCC--CCCEEEEeCCCCcChHHHHHHcCCEEEEEeccccc---------------------CC---
Confidence 66654 56677777765 99999999999988877776666665543221000 00
Q ss_pred CCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEe
Q psy16848 161 GAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIY 240 (514)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v 240 (514)
T Consensus 155 -------------------------------------------------------------------------------- 154 (404)
T PRK09265 155 -------------------------------------------------------------------------------- 154 (404)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCChhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccC-CCCCCccccCCC
Q psy16848 241 RHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYG-EHGAGIGERDGQ 316 (514)
Q Consensus 241 ~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g-~~~~~~~~~~~~ 316 (514)
..|.+.+++.+ .++++++++++|+||||.+++ +++|.++|+++|+++|+||+|....+. ....++....
T Consensus 155 -~~d~~~l~~~~----~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-- 227 (404)
T PRK09265 155 -FPDLDDIRSKI----TPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLA-- 227 (404)
T ss_pred -CCCHHHHHHhc----cccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcC--
Confidence 01333333333 346889999999999999999 899999999999999999999843332 2221222221
Q ss_pred ccCceEEEcCCcccccCCC---eEEEe--cHH----HHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhh-chHHHHHH
Q psy16848 317 LHNMDIISGTLGKAFGNIG---GYIVG--TKN----FIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSS-QEGVELRA 386 (514)
Q Consensus 317 ~~~~di~~~S~sK~lg~~G---G~l~~--~~~----~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~ 386 (514)
.....++++||||.+|.+| ||++. +++ +++.+.... .. ..+.+.+.+.++.++|..... ....+..+
T Consensus 228 ~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 304 (404)
T PRK09265 228 PDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDMLA-SM--RLCANVPAQHAIQTALGGYQSINELILPGG 304 (404)
T ss_pred CCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHHh-cc--ccCCCcHHHHHHHHHhcCchhHHHHHHHHH
Confidence 1135688899999998778 99985 343 334333221 11 225667777777777742210 01111224
Q ss_pred HHHHHHHHHHHHHHhC-CCccccCCC-cEEEEEeCCCc----cHHH-HHHHHHHhCCeEEecccCCCCCCCCcEEEEEeC
Q psy16848 387 KHQDIVAYLRNELIQI-GFPVEHTPS-HIIPIKIGNPA----LNTK-ICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPT 459 (514)
Q Consensus 387 ~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~~i~l~~~~----~~~~-~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~ 459 (514)
++.++++.+.+.|++. ++.+..+.+ .++++.++... +..+ +.+.+ .++||.+.|+..+.. ...+++|+++.
T Consensus 305 ~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l-~~~gv~v~pg~~F~~-~~~~~~Ri~~~ 382 (404)
T PRK09265 305 RLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLL-LQEKVLLVQGTGFNW-PEPDHFRIVTL 382 (404)
T ss_pred HHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEecccccCCCCHHHHHHHHH-HhCCEEEECchhhCC-CCCCeEEEEeC
Confidence 5677788888999887 777666654 46677776421 2334 44555 699999999886532 24679999996
Q ss_pred CCCCHHHHHHHHHHHHHHHHHc
Q psy16848 460 PFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 460 ~~~t~e~id~~~~~l~~~l~~~ 481 (514)
.+++++++++++|+++++..
T Consensus 383 --~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 383 --PRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred --CCHHHHHHHHHHHHHHHHHh
Confidence 67899999999999988754
No 205
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.94 E-value=2.9e-24 Score=221.88 Aligned_cols=347 Identities=18% Similarity=0.175 Sum_probs=233.9
Q ss_pred cCCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHc-CCCcEEEEecccccc
Q psy16848 15 KSNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLH-QKEAGLVFTSCYVAN 88 (514)
Q Consensus 15 ~~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-~~~~~i~~~sGt~a~ 88 (514)
.+|++++|+.++ .++| ||++.+++.+++++ +... +...+...++.+++++.+ +.++++|++||++|+
T Consensus 47 ~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~-~~~~------~~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~ 119 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEK-GLSF------GAPTELEVELAELVIELVPSIEMVRMVNSGTEAT 119 (426)
T ss_pred CCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHh-CCcC------CCCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHH
Confidence 367788888654 4444 89999999999987 3211 123466778999998876 567789999999999
Q ss_pred ccchhhcccc-CCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchh
Q psy16848 89 DSTLFTLGKM-IPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK 167 (514)
Q Consensus 89 ~~~l~~l~~~-~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (514)
+.+++..... ++.+.|..+..+|......+...+.....+... + ....+.
T Consensus 120 e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~--------~---~~~~~~------------------ 170 (426)
T PRK00062 120 MSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLP--------D---SPGVPE------------------ 170 (426)
T ss_pred HHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCC--------C---CCCCCc------------------
Confidence 9999875542 234455556666766543433332211100000 0 000000
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH 247 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~ 247 (514)
........++++|.+.
T Consensus 171 ----------------------------------------------------------------~~~~~~~~~~~~d~~~ 186 (426)
T PRK00062 171 ----------------------------------------------------------------DFAKHTLTAPYNDLEA 186 (426)
T ss_pred ----------------------------------------------------------------ccccceEEcCCCCHHH
Confidence 0001234456678888
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEE
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDII 323 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~ 323 (514)
+++.+.+. .+++++|+++++++.+|.+.+ +++|+++|++||+++|+||+|+-...|.. +..+..+. .+|++
T Consensus 187 l~~~i~~~-~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~--~~~~~~~~--~pDi~ 261 (426)
T PRK00062 187 VEELFEEY-GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALG--GAQGYYGV--TPDLT 261 (426)
T ss_pred HHHHHHhC-CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCc--cHHHHhCC--CcchH
Confidence 88888653 356899999999999999988 89999999999999999999982233321 22333443 57876
Q ss_pred EcCCcccccC--CCeEEEecHHHHHHHHhhcCceEe-ccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy16848 324 SGTLGKAFGN--IGGYIVGTKNFIDTIRSYAAGFIF-TTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELI 400 (514)
Q Consensus 324 ~~S~sK~lg~--~GG~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 400 (514)
+++|.++. +.|++++++++.+.+......+.+ +.+.+++.++++.++|+.+.++ +..++++++.+++++.|+
T Consensus 262 --~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~ 336 (426)
T PRK00062 262 --TLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLK 336 (426)
T ss_pred --hhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHH
Confidence 99999985 238888999999888643222222 3478999999999999988554 366677777777777666
Q ss_pred hC----CCcc-ccCCCcEEEEEeCCC-------------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCC
Q psy16848 401 QI----GFPV-EHTPSHIIPIKIGNP-------------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFH 462 (514)
Q Consensus 401 ~~----g~~~-~~~~~~~~~i~l~~~-------------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~ 462 (514)
++ ++.. ....|.++.+.+.+. .....+.+.|+ ++||.+.+..+ +.++++ ..+
T Consensus 337 ~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~Gv~v~~~~~-------~~~~~~--~~~ 406 (426)
T PRK00062 337 EAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAML-DEGVYLAPSQF-------EAGFVS--AAH 406 (426)
T ss_pred HHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHH-HCCeEeecCCc-------Cceeee--ccC
Confidence 43 4433 345677888776431 12357888886 89999975322 245665 468
Q ss_pred CHHHHHHHHHHHHHHHHHc
Q psy16848 463 TREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 463 t~e~id~~~~~l~~~l~~~ 481 (514)
|++|+++++++++++++++
T Consensus 407 t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 407 TDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998764
No 206
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.94 E-value=5.5e-24 Score=219.25 Aligned_cols=354 Identities=18% Similarity=0.160 Sum_probs=239.2
Q ss_pred CCceeeecccCC---CCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC--CcEEEEecccccc
Q psy16848 16 SNRVTCRLSSVQ---YKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK--EAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~~---~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~i~~~sGt~a~ 88 (514)
+|++++||.++. ++| ||++.+++.+++++.+...... -..+...++.++++++++. ++++|++||++|+
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~----~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~ 118 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGG----FTHKPAIELCQKLVKMTPNALDCVFLADSGSVAV 118 (427)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccc----cCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHH
Confidence 678888886543 555 7999999999999865432211 1235567888888888743 5789999999999
Q ss_pred ccchhhcccc-------CCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccC
Q psy16848 89 DSTLFTLGKM-------IPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTG 161 (514)
Q Consensus 89 ~~~l~~l~~~-------~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 161 (514)
+.+++..... ++...|..+..+|..+..++...+........ .....+.....
T Consensus 119 e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~------------~~~~~~~~~~~-------- 178 (427)
T TIGR00508 119 EVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSL------------YKGYLPEQIFA-------- 178 (427)
T ss_pred HHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCccccccc------------ccccCCCCeEc--------
Confidence 9999865421 23456777788888777666555432110000 00000000000
Q ss_pred CccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec
Q psy16848 162 AICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR 241 (514)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~ 241 (514)
+.+... . ...+.
T Consensus 179 -------------------------------------------------------------~~p~~~----~---~~~~~ 190 (427)
T TIGR00508 179 -------------------------------------------------------------PAPQNR----F---DEEWN 190 (427)
T ss_pred -------------------------------------------------------------CCCCcc----c---cchhH
Confidence 000000 0 00001
Q ss_pred CCChhHHHHHHhhccCCCceEEEEecC-CCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCc-cccCC
Q psy16848 242 HNDVNHLTQVLENMDVKIPKLVAFETV-HSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGI-GERDG 315 (514)
Q Consensus 242 ~~d~~~l~~~l~~~~~~~~~~vv~~~~-~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~-~~~~~ 315 (514)
.++++.+++.+.+. .++.++|+++++ ++..|...+ +++|+++|++||+++|+||+++ | +|+.|.++ .+..+
T Consensus 191 ~~~~~~l~~~l~~~-~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~t-G-~Gr~G~~~~~~~~~ 267 (427)
T TIGR00508 191 EEAITPLAKLMELH-SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIAT-G-FGRTGKLFACEHAG 267 (427)
T ss_pred HHHHHHHHHHHHhc-CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCcCCccchhhhcC
Confidence 22556677777643 346889999997 777777654 8999999999999999999996 4 24444432 23444
Q ss_pred CccCceEEEcCCcccccC---CCeEEEecHHHHHHHHhhcC-c--eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHH
Q psy16848 316 QLHNMDIISGTLGKAFGN---IGGYIVGTKNFIDTIRSYAA-G--FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQ 389 (514)
Q Consensus 316 ~~~~~di~~~S~sK~lg~---~GG~l~~~~~~~~~l~~~~~-~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 389 (514)
+ .+|++ +++|++++ +.+.++.++++.+.+..... . ...++..+++.++++.++++.+.++. ..++++
T Consensus 268 v--~pDi~--~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~---~~~~~~ 340 (427)
T TIGR00508 268 V--VPDIL--CVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGE---WQKQVS 340 (427)
T ss_pred C--CCCEE--EechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCC---HHHHHH
Confidence 4 78988 68999964 12667888888888864321 1 11244678999999999999886554 678889
Q ss_pred HHHHHHHHHHHhCCC-cc---ccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHH
Q psy16848 390 DIVAYLRNELIQIGF-PV---EHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTRE 465 (514)
Q Consensus 390 ~~~~~l~~~L~~~g~-~~---~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e 465 (514)
++.+++++.|++++. +. +...+.++.+.+.+......+.+.|+ ++||.+.+. .+.+|++++..+|++
T Consensus 341 ~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~-~~Gv~~~~~--------~~~l~~~ppl~~t~~ 411 (427)
T TIGR00508 341 AIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPVNVEELQKKFV-EQGVWIRPF--------GKLIYVMPPYIITTE 411 (427)
T ss_pred HHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCccCHHHHHHHHH-HCCeEEEec--------CCEEEEECCCCCCHH
Confidence 999999999988732 21 22357788888865555678889996 999999642 137999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy16848 466 MIDKFVTDLLAVWKS 480 (514)
Q Consensus 466 ~id~~~~~l~~~l~~ 480 (514)
|++++++++++++++
T Consensus 412 ~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 412 QLQKLTAALIEALHE 426 (427)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998864
No 207
>PRK03321 putative aminotransferase; Provisional
Probab=99.94 E-value=2.8e-24 Score=217.47 Aligned_cols=319 Identities=18% Similarity=0.161 Sum_probs=218.8
Q ss_pred eeeecccC--CCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCc-EEEEeccccc-cccchhh
Q psy16848 19 VTCRLSSV--QYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEA-GLVFTSCYVA-NDSTLFT 94 (514)
Q Consensus 19 ~~~d~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~i~~~sGt~a-~~~~l~~ 94 (514)
.++|+..+ .+...|.+.+++.+.+.... . ++ .....++++.++++++.+. .+++++|+++ +..++.+
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~-------y~-~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~ 93 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAGVN-R-------YP-DMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQA 93 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHhcC-c-------CC-CCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHH
Confidence 46788654 33346788888887765321 1 11 1236788999999988643 4667777765 4555555
Q ss_pred ccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhh
Q psy16848 95 LGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSH 174 (514)
Q Consensus 95 l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (514)
+.+ +||.|+++.+.|......++..|.+++.++.+. +
T Consensus 94 ~~~--~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~-~---------------------------------------- 130 (352)
T PRK03321 94 TAG--PGDEVIFAWRSFEAYPILVQVAGATPVQVPLTP-D---------------------------------------- 130 (352)
T ss_pred hcC--CCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCC-C----------------------------------------
Confidence 655 999999998887666555555555554433210 0
Q ss_pred hcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhh
Q psy16848 175 QHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLEN 254 (514)
Q Consensus 175 ~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~ 254 (514)
...+.+.+++.+
T Consensus 131 ------------------------------------------------------------------~~~~~~~l~~~~-- 142 (352)
T PRK03321 131 ------------------------------------------------------------------HTHDLDAMAAAI-- 142 (352)
T ss_pred ------------------------------------------------------------------CCCCHHHHHHhh--
Confidence 001334444433
Q ss_pred ccCCCceEEEEecCCCCCccccCHHHHHHHHHH--cCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc
Q psy16848 255 MDVKIPKLVAFETVHSMTGAICPLKELCEVSHQ--HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG 332 (514)
Q Consensus 255 ~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~--~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg 332 (514)
.++++++++++|+||||.++|.+++.++|++ +++++|+||+|.....+........... ..+..++++||||.+|
T Consensus 143 --~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~g 219 (352)
T PRK03321 143 --TDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVR-DHPNVVVLRTFSKAYG 219 (352)
T ss_pred --ccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHh-hCCCEEEEecchHHhh
Confidence 3467899999999999999999999999988 5999999999984433221111111111 1246799999999999
Q ss_pred CCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccC
Q psy16848 333 NIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHT 409 (514)
Q Consensus 333 ~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 409 (514)
.+| ||+++++++++.+...... .+.+.+.+.++.+++... +...+..++..+.++.+.+.|++.++.+.++
T Consensus 220 ~~GlRiG~~v~~~~~~~~~~~~~~~----~~~s~~~q~~a~~~l~~~--~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~ 293 (352)
T PRK03321 220 LAGLRVGYAVGHPEVIAALRKVAVP----FSVNSLAQAAAIASLAAE--DELLERVDAVVAERDRVRAALRAAGWTVPPS 293 (352)
T ss_pred hHHHhhhhhcCCHHHHHHHHHhcCC----CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHCCCccCCC
Confidence 667 9999999999998865432 256778887777777532 2333444555566678889998888766555
Q ss_pred CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 410 PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 410 ~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
.+.++++.++. ...++++.| +++||.+.+. +..++|++++ +.+++++++++|++++.
T Consensus 294 ~g~~i~i~l~~--~~~~~~~~l-~~~gI~v~~~-------~~~~iRi~~~---~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 294 QANFVWLPLGE--RTADFAAAA-AEAGVVVRPF-------AGEGVRVTIG---APEENDAFLRAARAWRA 350 (352)
T ss_pred CCCEEEEeCCC--CHHHHHHHH-HHCCEEEEcc-------CCCcEEEeeC---CHHHHHHHHHHHHHHhc
Confidence 67788887753 367899998 5899999852 1346999997 89999999999998754
No 208
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.94 E-value=2e-24 Score=223.49 Aligned_cols=377 Identities=16% Similarity=0.117 Sum_probs=249.7
Q ss_pred cCCceeeecccCC----CCCCh---hHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccc
Q psy16848 15 KSNRVTCRLSSVQ----YKVPK---GGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVA 87 (514)
Q Consensus 15 ~~g~~~~d~~~~~----~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a 87 (514)
..|..++++...+ ++.+. .+.+++.+++.. |.. .|+......++++.++++++.+++++++||++|
T Consensus 33 ~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~-g~~------~Y~~~~g~~~Lreaia~~~~~~~vv~t~ggt~A 105 (460)
T PRK13238 33 EAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMR-GDE------AYAGSRSYYRLEDAVKDIFGYPYTIPTHQGRAA 105 (460)
T ss_pred HcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHh-CCc------ccCCCCCHHHHHHHHHHHhCCCcEEECCCHHHH
Confidence 3566788886544 33333 477777777764 211 122234568899999999999999999999999
Q ss_pred cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchh
Q psy16848 88 NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK 167 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (514)
+..++.++.+ ||| |+++.+.|......+..+|++++.++....... ..
T Consensus 106 ~~~~~~all~--pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~-------~~---------------------- 153 (460)
T PRK13238 106 EQILFPVLIK--KGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDT-------GS---------------------- 153 (460)
T ss_pred HHHHHHHhCC--CCC-EEccCCcccchHHHHHHcCCEEEEEeccccccc-------cc----------------------
Confidence 9999888866 999 888888777777667778887775543100000 00
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH 247 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~ 247 (514)
..+. -..-|++.
T Consensus 154 -------------------------~~~f-------------------------------------------~g~id~e~ 165 (460)
T PRK13238 154 -------------------------RHPF-------------------------------------------KGNFDLEK 165 (460)
T ss_pred -------------------------cccc-------------------------------------------cCCcCHHH
Confidence 0000 00126677
Q ss_pred HHHHHhhccCCCceEEEEecCCCCCc-cccC---HHHHHHHHHHcCCEEEEecccccc-c-cC------CCCCCccccC-
Q psy16848 248 LTQVLENMDVKIPKLVAFETVHSMTG-AICP---LKELCEVSHQHGALTFVDEVHAVG-L-YG------EHGAGIGERD- 314 (514)
Q Consensus 248 l~~~l~~~~~~~~~~vv~~~~~nptG-~~~~---l~~l~~l~~~~gv~li~Dea~~~g-~-~g------~~~~~~~~~~- 314 (514)
+++.+.+...+++++|++++++||+| .+++ +++|.++|++||+++|+|+++..+ . +. ..+.++.+..
T Consensus 166 Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~ 245 (460)
T PRK13238 166 LEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAR 245 (460)
T ss_pred HHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhh
Confidence 77777655446799999999999997 7777 689999999999999999988632 1 11 1111111110
Q ss_pred CCccCceEEEcCCcccc-cCCCeEEEec-HHHHHHHHhhc---CceEeccC-CcHHHHHHHHHHHHHhhhchHHHHHHHH
Q psy16848 315 GQLHNMDIISGTLGKAF-GNIGGYIVGT-KNFIDTIRSYA---AGFIFTTS-LPPTVLAGAREAIRILSSQEGVELRAKH 388 (514)
Q Consensus 315 ~~~~~~di~~~S~sK~l-g~~GG~l~~~-~~~~~~l~~~~---~~~~~~~~-~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 388 (514)
....-.|++++|.+|.. ++.||+++.+ +++.+.++... .++. +.+ .+...+.|+..+|+...++. ..+..
T Consensus 246 ~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~-t~~g~~~~~~~Ala~~l~e~~~~~---~~~~~ 321 (460)
T PRK13238 246 EMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFP-TYGGLAGRDMEALAVGLYEGMDED---YLAYR 321 (460)
T ss_pred hhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhhhcccccCCcc-cccCcHHHHHHHHHhhHHHhhChH---HHHHH
Confidence 00124789999999965 4457888877 68888887653 1221 223 34444566665665432222 33333
Q ss_pred HHHHHHHHHHHHhCCCccccCCCc-EEEEEeCC--------CccHHHHHHHHHHhCCeEEecccCCCCCC----C-----
Q psy16848 389 QDIVAYLRNELIQIGFPVEHTPSH-IIPIKIGN--------PALNTKICDMLLKEKGHYVQPINYPTVPV----G----- 450 (514)
Q Consensus 389 ~~~~~~l~~~L~~~g~~~~~~~~~-~~~i~l~~--------~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~----~----- 450 (514)
.+++++|.+.|++.|+++..+.+. ++.+.+.. .....+++.+|+++.||.+.++..+..+. +
T Consensus 322 ~~~~~~l~~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~ 401 (460)
T PRK13238 322 IGQVEYLGEGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPA 401 (460)
T ss_pred HHHHHHHHHHHHHCCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCC
Confidence 446799999999999999877665 44444432 11357899999999999999877433332 1
Q ss_pred -CcEEEEEeCC-CCCHHHHHHHHHHHHHHHHHcCCccCCcchhhHhHHHHHHHH
Q psy16848 451 -EEKIRLAPTP-FHTREMIDKFVTDLLAVWKSLDLPLSGLTCAQVNILLFIILF 502 (514)
Q Consensus 451 -~~~iRl~~~~-~~t~e~id~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 502 (514)
...+|++++. ..|.++++.++++|+++.++-....+..--.+.+++++|.+.
T Consensus 402 ~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~r~f~~~ 455 (460)
T PRK13238 402 PAELLRLAIPRRVYTQSHMDYVAEALKAVKENRESIKGLRFTYEPPVLRHFTAR 455 (460)
T ss_pred ccceEEEecccccCCHHHHHHHHHHHHHHHHhHhhcCCeEEeecCccceeeeee
Confidence 4799999984 458999999999999988765543333344677888766554
No 209
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=4.9e-24 Score=216.07 Aligned_cols=320 Identities=18% Similarity=0.153 Sum_probs=217.1
Q ss_pred CCceeeecccC--CCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-cEEEEeccc-cccccc
Q psy16848 16 SNRVTCRLSSV--QYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-AGLVFTSCY-VANDST 91 (514)
Q Consensus 16 ~g~~~~d~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~i~~~sGt-~a~~~~ 91 (514)
.+...+|+..+ .+...|.+.+++.+.+... ..+ +. ....++++.++++++.+ ..+++++|+ +++..+
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~Y-------~~-~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~ 98 (357)
T PRK14809 28 DPDDLVKLSSNENPHGPSPAAVEAIREAAERV-HSY-------PK-ASHADLTAALADRWDVSPEQVWLANGGDGALDYL 98 (357)
T ss_pred CccceeEecCCCCCCCCCHHHHHHHHHHHhhh-hcC-------CC-CCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHH
Confidence 34567888653 3445778888887776531 111 11 12457888888888743 345565554 567777
Q ss_pred hhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhh
Q psy16848 92 LFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCE 171 (514)
Q Consensus 92 l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (514)
+.++.. +||.|+++.++|.......+..|..++.++...
T Consensus 99 ~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~--------------------------------------- 137 (357)
T PRK14809 99 ARAMLD--PGDTVLVPDPGFAYYGMSARYHHGEVREYPVSK--------------------------------------- 137 (357)
T ss_pred HHHhcC--CCCEEEEeCCChHHHHHHHHHcCCeEEEEeccc---------------------------------------
Confidence 777765 999999999988765544444554444332100
Q ss_pred hhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHH
Q psy16848 172 VSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQV 251 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~ 251 (514)
.+++....+.
T Consensus 138 ----------------------------------------------------------------------~~~~~~~~~~ 147 (357)
T PRK14809 138 ----------------------------------------------------------------------ADDFEQTADT 147 (357)
T ss_pred ----------------------------------------------------------------------CcCCCcCHHH
Confidence 0112211222
Q ss_pred HhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHc--CCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcc
Q psy16848 252 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQH--GALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGK 329 (514)
Q Consensus 252 l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~--gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK 329 (514)
+.+.. ++++++++++||||||.+++.+++.++++.. ++++|+||+|........ ...... ..+..++++||||
T Consensus 148 ~~~~~-~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~---~~~~~~-~~~~vi~~~SfSK 222 (357)
T PRK14809 148 VLDAY-DGERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPS---AVALVE-ERDDVAVLRTFSK 222 (357)
T ss_pred HHHhh-cCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCch---hHHHHh-hCCCEEEEecchh
Confidence 22221 2478999999999999999977777776654 789999999994332111 111111 2256799999999
Q ss_pred cccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCcc
Q psy16848 330 AFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPV 406 (514)
Q Consensus 330 ~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 406 (514)
.+|.+| ||+++++++++.+.+....+ ..+...+.++.++++ ...++++.++.++++++++.+.|.+..+
T Consensus 223 ~~~~~GlRiG~~~~~~~~~~~~~~~~~~~----~~~~~~~~~a~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~-- 294 (357)
T PRK14809 223 AYGLAGLRLGYAVVPEEWADAYARVNTPF----AASELACRAGLAALD--DDEHVERTVETARWAREYIREELDAPTW-- 294 (357)
T ss_pred HhcCcchhheeeecCHHHHHHHHHhCCCC----CCCHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHhcCccC--
Confidence 999778 99999999999887754322 567777777777775 2445667788888888888888866432
Q ss_pred ccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 407 EHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 407 ~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
++.+.+++++++ +..++++.| .++||.+.++..+.. .+++|++++ +++++++++++|+++++
T Consensus 295 -~~~g~f~~~~~~---~~~~~~~~l-~~~gv~v~~g~~f~~---~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 295 -ESAGNFVLAEVG---DASAVAEAA-QERGVIVRDCTSFGL---PECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred -CCCCCEEEEECC---CHHHHHHHH-HHCCEEEEECccCCC---CCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 456778888775 367888888 489999999986532 469999987 57899999999998764
No 210
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.94 E-value=4e-24 Score=214.18 Aligned_cols=273 Identities=17% Similarity=0.193 Sum_probs=197.3
Q ss_pred HHHHHHHHHhHcCCC-cEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHH
Q psy16848 62 HEKLEEDVAKLHQKE-AGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVL 140 (514)
Q Consensus 62 ~~~~~~~la~~~~~~-~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l 140 (514)
..+++++++++++.+ ..+++++|+++.+.++..+.. +| .|++..+.|......++..|.+++.++ |++.
T Consensus 49 ~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l~--~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~--d~~~----- 118 (330)
T TIGR01140 49 YDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLLA--PG-RVLVLAPTYSEYARAWRAAGHEVVELP--DLDR----- 118 (330)
T ss_pred HHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHhC--CC-eEEEeCCCcHHHHHHHHHcCCEEEEeC--CHHH-----
Confidence 388999999999864 567788887765555545543 77 588888888887766666665555443 3333
Q ss_pred HhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCce
Q psy16848 141 ENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEV 220 (514)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v 220 (514)
T Consensus 119 -------------------------------------------------------------------------------- 118 (330)
T TIGR01140 119 -------------------------------------------------------------------------------- 118 (330)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecc
Q psy16848 221 AIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEV 297 (514)
Q Consensus 221 ~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea 297 (514)
+++.+ ++++++++++|+||||.+++ +++|.++|+++|+++|+||+
T Consensus 119 ---------------------------l~~~~-----~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~ 166 (330)
T TIGR01140 119 ---------------------------LPAAL-----EELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEA 166 (330)
T ss_pred ---------------------------HHhhc-----ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECc
Confidence 33332 12568888999999999999 77888999999999999999
Q ss_pred ccccccCCCCCCccccCCCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHH
Q psy16848 298 HAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIR 374 (514)
Q Consensus 298 ~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~ 374 (514)
|....... ++....+ ..+.+++++||||.+|.+| ||+++++++++.+......+ +.+.+.+.++...++
T Consensus 167 y~~~~~~~---~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~----~~s~~~q~~~~~~l~ 238 (330)
T TIGR01140 167 FIDFTPDA---SLAPQAA-RFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALGPW----TVNGPARAAGRAALA 238 (330)
T ss_pred ccccCCcc---chhhHhc-cCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCCCC----CchHHHHHHHHHHHh
Confidence 98433221 1211111 2367899999999999767 99999999999888765433 456777777777776
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHHHhCC-CccccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcE
Q psy16848 375 ILSSQEGVELRAKHQDIVAYLRNELIQIG-FPVEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEK 453 (514)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~ 453 (514)
. ....++.+++++++++++.+.|++.+ +.+.++.+.++++.+++ ..++++.|+ ++||.+.++..+. ....++
T Consensus 239 ~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~~---~~~l~~~l~-~~gi~v~pg~~f~-~~~~~~ 311 (330)
T TIGR01140 239 D--TAWQAATRARLAAERARLAALLARLGGLEVVGGTALFLLVRTPD---AAALHEALA-RRGILIRDFDNFP-GLDPRY 311 (330)
T ss_pred c--hHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEcCC---HHHHHHHHH-HCCEEEEECCCCC-CCCCCE
Confidence 2 23446778999999999999999986 55545556677777653 568999996 7999999998753 224579
Q ss_pred EEEEeCCCCCHHHHHHHHHHH
Q psy16848 454 IRLAPTPFHTREMIDKFVTDL 474 (514)
Q Consensus 454 iRl~~~~~~t~e~id~~~~~l 474 (514)
+|++++ ...++ ++++++|
T Consensus 312 iRi~~~--~~~~~-~~~~~~l 329 (330)
T TIGR01140 312 LRFALP--TDEEN-DRLEEAL 329 (330)
T ss_pred EEEEec--CHHHH-HHHHHhh
Confidence 999998 23344 8877765
No 211
>KOG0259|consensus
Probab=99.93 E-value=1e-23 Score=200.09 Aligned_cols=321 Identities=13% Similarity=0.139 Sum_probs=241.5
Q ss_pred ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--------CCcEEEEeccccccccchhhccccCCCc
Q psy16848 31 PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--------KEAGLVFTSCYVANDSTLFTLGKMIPGL 102 (514)
Q Consensus 31 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--------~~~~i~~~sGt~a~~~~l~~l~~~~~gd 102 (514)
.++..+|+.++++.-..+ + |+........++.+|++++ .++++++.++++|++.++.++++ ||.
T Consensus 80 s~~a~~Av~~al~Sgk~N--~----Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~--p~a 151 (447)
T KOG0259|consen 80 SQEAEQAVVDALRSGKGN--G----YAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLAN--PGA 151 (447)
T ss_pred CHHHHHHHHHHHhcCCCC--C----cCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcC--CCC
Confidence 578999999999862221 1 2222334566777777753 34556666678999999999987 999
Q ss_pred eEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEe
Q psy16848 103 HYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFV 182 (514)
Q Consensus 103 ~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (514)
.|+++.+.++-........
T Consensus 152 NILlPrPGfp~Y~~~a~~~------------------------------------------------------------- 170 (447)
T KOG0259|consen 152 NILLPRPGFPLYDTRAIYS------------------------------------------------------------- 170 (447)
T ss_pred ceecCCCCCchHHHhhhhc-------------------------------------------------------------
Confidence 9999988775544333333
Q ss_pred eccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec---CCChhHHHHHHhhccCCC
Q psy16848 183 DEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR---HNDVNHLTQVLENMDVKI 259 (514)
Q Consensus 183 ~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~---~~d~~~l~~~l~~~~~~~ 259 (514)
|.++.+++ +++++.+...+++...++
T Consensus 171 ---------------------------------------------------~lEVR~ydlLPe~~weIDL~~veal~DEN 199 (447)
T KOG0259|consen 171 ---------------------------------------------------GLEVRYYDLLPEKDWEIDLDGVEALADEN 199 (447)
T ss_pred ---------------------------------------------------CceeEeecccCcccceechHHHHHhhccC
Confidence 33444443 667888888888888889
Q ss_pred ceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccC-CCCCCccccCCCccCceEEEcCCcccccCCC
Q psy16848 260 PKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYG-EHGAGIGERDGQLHNMDIISGTLGKAFGNIG 335 (514)
Q Consensus 260 ~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g-~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G 335 (514)
|.++++.||+||.|.+++ |++|++.|+++|+++|.||+|....+| .+..++..+..+ -+.+.+++.||.+=.+|
T Consensus 200 T~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssi--VPVitlggisKrW~VPG 277 (447)
T KOG0259|consen 200 TVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSI--VPVITLGGISKRWIVPG 277 (447)
T ss_pred eeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhcccc--CceEeecccccccccCC
Confidence 999999999999999999 999999999999999999999955554 344444444433 78999999999887668
Q ss_pred ---eEEEecH--------HHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-C
Q psy16848 336 ---GYIVGTK--------NFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-G 403 (514)
Q Consensus 336 ---G~l~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 403 (514)
||++..+ ..++.+...... +...+.+.++|+-..|+.-.++.......-++.+.+...+.|++. +
T Consensus 278 WRlGWi~~hD~~gvf~~~~~~q~~~~~~~~---~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~ 354 (447)
T KOG0259|consen 278 WRLGWIALHDPRGVFRDTKVVQGIKNFLDI---IPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPC 354 (447)
T ss_pred ceeeeEEEecccccccchHHHHHHHHHHhc---cCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCC
Confidence 9987642 233444443322 346778889999999987777788888999999999999999998 6
Q ss_pred Cc-cccCCCcE-EEEEe-----CCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 404 FP-VEHTPSHI-IPIKI-----GNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 404 ~~-~~~~~~~~-~~i~l-----~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
+. ...|.+.+ +.+.+ ++-.+..+|+.+|.+|+.+.+-||..+.. ++|+|++++ +..+.+++++++|++
T Consensus 355 l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~---~nw~Ri~i~--~~~~~leea~~Rik~ 429 (447)
T KOG0259|consen 355 LTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGL---KNWLRIVIT--VEEEMLEEAFSRIKE 429 (447)
T ss_pred cccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccC---CCeEEEEEc--cChHHHHHHHHHHHH
Confidence 66 45566653 33332 34566789999999999999999987544 579999998 678899999999999
Q ss_pred HHHHc
Q psy16848 477 VWKSL 481 (514)
Q Consensus 477 ~l~~~ 481 (514)
+..+-
T Consensus 430 Fc~RH 434 (447)
T KOG0259|consen 430 FCDRH 434 (447)
T ss_pred HHHhh
Confidence 98764
No 212
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.93 E-value=2.4e-24 Score=219.53 Aligned_cols=318 Identities=20% Similarity=0.245 Sum_probs=231.0
Q ss_pred ChhHHHHHHHHHHHhCCCCCC--cCcccCcchHHHHHHHHHHhHcCCCc---EEEEeccccccccchhhccc-cCCCceE
Q psy16848 31 PKGGRKCLGEALEKFGTGAGG--TRNISGNSLFHEKLEEDVAKLHQKEA---GLVFTSCYVANDSTLFTLGK-MIPGLHY 104 (514)
Q Consensus 31 ~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~la~~~~~~~---~i~~~sGt~a~~~~l~~l~~-~~~gd~v 104 (514)
++.+.+++.+.+..+...... +.......+..+++++.+++++|.+. .+|++|+|+++..++..+.. ..+||+|
T Consensus 12 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~v 91 (371)
T PF00266_consen 12 PKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEV 91 (371)
T ss_dssp BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEE
T ss_pred CHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccccccc
Confidence 578999999998865433311 11122236778899999999999766 46667778888888888721 3499999
Q ss_pred EecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeec
Q psy16848 105 ISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDE 184 (514)
Q Consensus 105 ~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (514)
++....|.+....+..
T Consensus 92 l~~~~~~~s~~~~~~~---------------------------------------------------------------- 107 (371)
T PF00266_consen 92 LVTSNEHPSNRYPWEE---------------------------------------------------------------- 107 (371)
T ss_dssp EEEESSHHHHHHHHHH----------------------------------------------------------------
T ss_pred cccccccccccccccc----------------------------------------------------------------
Confidence 9999999998733211
Q ss_pred cccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec-----CCChhHHHHHHhhccCCC
Q psy16848 185 VHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR-----HNDVNHLTQVLENMDVKI 259 (514)
Q Consensus 185 ~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~-----~~d~~~l~~~l~~~~~~~ 259 (514)
.....|.++..++ ..|.+.+++.+. ++
T Consensus 108 --------------------------------------------~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~----~~ 139 (371)
T PF00266_consen 108 --------------------------------------------IAKRKGAEVRVIPADPGGSLDLEDLEEALN----PD 139 (371)
T ss_dssp --------------------------------------------HHHHTTEEEEEEEEGTTSSCSHHHHHHHHH----TT
T ss_pred --------------------------------------------ccccchhhhccccccccchhhhhhhhhhhc----cc
Confidence 1112233333333 124555666663 56
Q ss_pred ceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-eEE
Q psy16848 260 PKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG-GYI 338 (514)
Q Consensus 260 ~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G-G~l 338 (514)
++++++++..|.+|...|+++|.++|+++|+++++|.++++|.. +.+....++|++++|.+|.+|+.| |++
T Consensus 140 ~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~--------~id~~~~~~D~~~~s~~Kl~gp~G~g~l 211 (371)
T PF00266_consen 140 TRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCV--------PIDLDELGADFLVFSSHKLGGPPGLGFL 211 (371)
T ss_dssp ESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTS--------S--TTTTTESEEEEESTSTTSSSTEEEE
T ss_pred cceEEeecccccccEEeeeceehhhhhccCCceeEechhccccc--------cccccccccceeeecccccCCCCchhhh
Confidence 89999999999999999999999999999999999999998775 222224589999999999557778 999
Q ss_pred EecHHHHHHHHhhcCceE------------------e-ccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy16848 339 VGTKNFIDTIRSYAAGFI------------------F-TTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNEL 399 (514)
Q Consensus 339 ~~~~~~~~~l~~~~~~~~------------------~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 399 (514)
+.+++.++.+++...++. + ..+.+.....++..+++.+.+.+++++.++..++.+++.+.|
T Consensus 212 ~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l 291 (371)
T PF00266_consen 212 YVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREAL 291 (371)
T ss_dssp EEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhh
Confidence 999999999865544332 1 124566777888889998877788899999999999999999
Q ss_pred HhC-CCccccC-----CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCC-----CCCcEEEEEeCCCCCHHHHH
Q psy16848 400 IQI-GFPVEHT-----PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVP-----VGEEKIRLAPTPFHTREMID 468 (514)
Q Consensus 400 ~~~-g~~~~~~-----~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~-----~~~~~iRl~~~~~~t~e~id 468 (514)
++. ++.+..+ .++++.+.++. .+..++.+.|. ++||.+..|..+..+ ...+.+|+|++.++|++|||
T Consensus 292 ~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~L~-~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~ 369 (371)
T PF00266_consen 292 EELPGIEVLGPDDEPRRPSIVSFNLPG-SDADDVVKYLE-ERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVD 369 (371)
T ss_dssp HHTTTEEESSSSCGGBGTTEEEEEETT-SSHHHHHHHHH-HHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHH
T ss_pred hcCCceeEeeecccccccceEEEeecC-CCHHHHHHHHh-hcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHh
Confidence 998 4444332 34588888754 56788888885 779999987664411 12379999999999999999
Q ss_pred HH
Q psy16848 469 KF 470 (514)
Q Consensus 469 ~~ 470 (514)
++
T Consensus 370 ~l 371 (371)
T PF00266_consen 370 RL 371 (371)
T ss_dssp HH
T ss_pred hC
Confidence 85
No 213
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=4.5e-24 Score=217.51 Aligned_cols=325 Identities=18% Similarity=0.156 Sum_probs=216.2
Q ss_pred eeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC---------CcEEEEecccc-c
Q psy16848 20 TCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK---------EAGLVFTSCYV-A 87 (514)
Q Consensus 20 ~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~---------~~~i~~~sGt~-a 87 (514)
++|++.+. +..+|.+.+++.+.+.. +.....+. ..| ..++++.++++++. ++.|++++|++ +
T Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~-~~G----~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a 103 (374)
T PRK02610 30 LDRLDTNEFPYDLPPDLKQKLAWLYQQ-GIESNRYP-DGG----HEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL 103 (374)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhh-cccccCCC-CCc----hHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence 66775443 33467899988887664 11111111 123 35566666666542 12366677665 4
Q ss_pred cccchhhccccCCCc-eEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccch
Q psy16848 88 NDSTLFTLGKMIPGL-HYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPL 166 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd-~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (514)
+..++.+++. +|| .|+++.++|......++..|.+++.++..+ +
T Consensus 104 l~~~~~~~~~--~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~-------------------------------- 148 (374)
T PRK02610 104 IRSLLIATCL--GGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDP-E-------------------------------- 148 (374)
T ss_pred HHHHHHHHcC--CCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCc-c--------------------------------
Confidence 5555555554 775 899999999998888888888777654310 0
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
+. ..|.+
T Consensus 149 ----------------------------~~---------------------------------------------~~d~~ 155 (374)
T PRK02610 149 ----------------------------TF---------------------------------------------EIDLA 155 (374)
T ss_pred ----------------------------cC---------------------------------------------CCCHH
Confidence 00 01455
Q ss_pred HHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHH-cCCEEEEeccccccccCCCCCCccccCCCccCceEEEc
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQ-HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISG 325 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~-~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~ 325 (514)
.+++.+++....+++++++++||||||.+++.+++.++.+- +++++|+||+|..... .. ...... .....++++
T Consensus 156 ~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~-~~--~~~~~~--~~~~~ivi~ 230 (374)
T PRK02610 156 AAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQ-TT--LVGELA--QHPNWVILR 230 (374)
T ss_pred HHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCc-cc--hHHHHh--cCCCEEEEE
Confidence 55555544323468999999999999999996555554431 4899999999983321 11 111111 123568899
Q ss_pred CCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 326 TLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 326 S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
||||.+|.+| ||+++++++++.+......+ +.+.+.+.++..+++.. +...+.++... +.++.+.+.|+++
T Consensus 231 SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~~~~----~~~~~~q~a~~~~l~~~-~~~~~~~~~~~-~~r~~l~~~L~~~ 304 (374)
T PRK02610 231 TFSKAFRLAAHRVGYAIGHPELIAVLEKVRLPY----NLPSFSQLAAQLALEHR-QELLAAIPEIL-QERDRLYQALQEL 304 (374)
T ss_pred ecchhccCcccceeeeecCHHHHHHHHHhcCCC----CCCHHHHHHHHHHhcCH-HHHHHHHHHHH-HHHHHHHHHHHhC
Confidence 9999998878 99999999999887765333 45777777777777643 23333444443 4467788888776
Q ss_pred -CCccccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 403 -GFPVEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 403 -g~~~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
++.+.++.+.+++++++...+..++++.| .++||.+.+. .+++|++++ +.+++++++++|+++++.+
T Consensus 305 ~~~~~~p~~g~f~~~~l~~~~~~~~~~~~l-~~~gi~v~~~--------~~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 305 PQLRVWPSAANFLYLRLSQDAALAALHQAL-KAQGTLVRHT--------GGGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred CCcEeCCCcceEEEEeCCCCCCHHHHHHHH-HHCCEEEEeC--------CCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 66555556678888887655678899998 4999999642 358999998 5678999999999988765
No 214
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.93 E-value=7.1e-24 Score=216.23 Aligned_cols=323 Identities=18% Similarity=0.168 Sum_probs=227.2
Q ss_pred CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCc--EEEEeccccccccchhhcccc--CCCceEE
Q psy16848 30 VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEA--GLVFTSCYVANDSTLFTLGKM--IPGLHYI 105 (514)
Q Consensus 30 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~--~i~~~sGt~a~~~~l~~l~~~--~~gd~v~ 105 (514)
.+|.+.+++.+++... .+.+....+.....+++++++++++|.+. .+++++||+++..++.++... .++|.|+
T Consensus 32 ~~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl 108 (371)
T PRK13520 32 PHPIARKAHEMFLETN---LGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIV 108 (371)
T ss_pred chHHHHHHHHHHHhcC---CCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEE
Confidence 4789899999888752 12222223456677899999999999753 577888999998888766432 3689999
Q ss_pred ecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecc
Q psy16848 106 SDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEV 185 (514)
Q Consensus 106 ~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (514)
+++..|.+...+++..|.+++.++.++.
T Consensus 109 ~~~~~h~s~~~~~~~~g~~~~~v~~~~~---------------------------------------------------- 136 (371)
T PRK13520 109 VPESAHFSFDKAADMLGVELRRAPLDDD---------------------------------------------------- 136 (371)
T ss_pred ecCcchHHHHHHHHHcCceEEEecCCCC----------------------------------------------------
Confidence 9999999987776666666554432100
Q ss_pred ccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEE
Q psy16848 186 HAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAF 265 (514)
Q Consensus 186 ~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~ 265 (514)
...|.+.+++.++ ++++++++
T Consensus 137 -------------------------------------------------------~~~d~~~l~~~i~----~~~~~vi~ 157 (371)
T PRK13520 137 -------------------------------------------------------YRVDVKAVEDLID----DNTIGIVG 157 (371)
T ss_pred -------------------------------------------------------CcCCHHHHHHHHh----hCCEEEEE
Confidence 0114455555553 33667777
Q ss_pred ecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccC--CCCCCccccCCCccCceEEEcCCcccccC-C-CeEEE-e
Q psy16848 266 ETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYG--EHGAGIGERDGQLHNMDIISGTLGKAFGN-I-GGYIV-G 340 (514)
Q Consensus 266 ~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g--~~~~~~~~~~~~~~~~di~~~S~sK~lg~-~-GG~l~-~ 340 (514)
.+++|++|.+.|+++|.++|+++|+++++|++|+.+... ..+ ........+.|.+++|.+|+..+ . +|+++ .
T Consensus 158 ~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~---~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~ 234 (371)
T PRK13520 158 IAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDP---PNFDFSLPGVDSITIDPHKMGLAPIPAGGILFR 234 (371)
T ss_pred EcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCC---CCccccCCCCceEEECCccccCccCCceEEEEc
Confidence 778899999999999999999999999999999854321 111 00111123678898899997643 2 25454 5
Q ss_pred cHHHHHHHHhhcCce------EeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCc-cccCCCcE
Q psy16848 341 TKNFIDTIRSYAAGF------IFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFP-VEHTPSHI 413 (514)
Q Consensus 341 ~~~~~~~l~~~~~~~------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~ 413 (514)
++++++.+......+ .+..+.+...+.++.++++.+..+++++.+++..++.+++.+.|++.|++ +..+..++
T Consensus 235 ~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 314 (371)
T PRK13520 235 DESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEPVLNI 314 (371)
T ss_pred CHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCCCceE
Confidence 666777664221111 01112344557778888887766677888999999999999999988887 55556667
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 414 IPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 414 ~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
+.+.++ ...++.+.|. ++||.+.... ..+++|++++..+|++|++++++.|+++++
T Consensus 315 v~~~~~---~~~~v~~~L~-~~gi~v~~~~------~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 315 VAFDDP---NPDEVREKLR-ERGWRVSVTR------CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred EEEecC---CHHHHHHHHH-HCCceeccCC------CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 777765 3678888995 8899987532 245899999888999999999999998765
No 215
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.93 E-value=1.1e-23 Score=210.78 Aligned_cols=270 Identities=13% Similarity=0.045 Sum_probs=195.6
Q ss_pred HHHHHHHHhHcCCCcEEEEecccc-ccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHH
Q psy16848 63 EKLEEDVAKLHQKEAGLVFTSCYV-ANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLE 141 (514)
Q Consensus 63 ~~~~~~la~~~~~~~~i~~~sGt~-a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 141 (514)
.++++.++++++.+..+ +++|++ ++..++ .. .+||.|+++.++|......++..|.+++.++.. ++
T Consensus 52 ~~Lr~~ia~~~~~~~I~-it~Gs~~al~~~~--~~--~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~---~~----- 118 (330)
T PRK05664 52 DGLEAAARAYYGAPQLL-PVAGSQAAIQALP--RL--RAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA---EV----- 118 (330)
T ss_pred HHHHHHHHHHhCCCCEE-ECcCHHHHHHHHH--Hc--cCCCEEEEcCCChHHHHHHHHHcCCeEEEechh---hH-----
Confidence 68889999999987544 555554 544432 23 399999999999999888877777776655321 11
Q ss_pred hcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCcee
Q psy16848 142 NMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVA 221 (514)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~ 221 (514)
T Consensus 119 -------------------------------------------------------------------------------- 118 (330)
T PRK05664 119 -------------------------------------------------------------------------------- 118 (330)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccc
Q psy16848 222 IHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 222 ~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~ 298 (514)
++.+ ++++++++++|+||||.+++ +++|.++|+++++++|+||+|
T Consensus 119 ---------------------------~~~~-----~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y 166 (330)
T PRK05664 119 ---------------------------EAAL-----DSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAF 166 (330)
T ss_pred ---------------------------hhhh-----cCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCc
Confidence 1111 13568888899999999999 577777789999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRI 375 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~ 375 (514)
..... ..++.... ..+..++++||||.+|.+| ||+++++++++.+......+ ..+...+.++.++|+.
T Consensus 167 ~~~~~---~~s~~~~~--~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~L~~ 237 (330)
T PRK05664 167 MDNTP---QHSLAACA--HRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPW----TVSGPTRWLAQAALAD 237 (330)
T ss_pred ccCCC---cccccccc--cCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCCC----CCCHHHHHHHHHHHhC
Confidence 73321 11222222 2245799999999999778 99999999999988765433 4566777777777763
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEE
Q psy16848 376 LSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIR 455 (514)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iR 455 (514)
. ...++.++.++++++++.+.|++.++...++...++++.++ +..++.+.|. ++||.++.. . ..+++|
T Consensus 238 ~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~f~~~~~~---~~~~~~~~l~-~~gi~v~~f---~---~~~~iR 305 (330)
T PRK05664 238 T--PWQRRQRERLLAASQRLAALLRRHGLTPAGGCALFQWVRTE---DAAALHEFLA-RRGILTRLF---E---QPASLR 305 (330)
T ss_pred h--HHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcceEEEEecC---CHHHHHHHHH-HCCeEEEEC---C---CCCeEE
Confidence 2 34456788889999999999999876533333346666654 3678888885 899999742 1 246999
Q ss_pred EEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 456 LAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 456 l~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
++++. +.++++++.+.|+++.++
T Consensus 306 is~~~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 306 FGLPA--DEADWARLDQALLAYRKE 328 (330)
T ss_pred EECCC--CHHHHHHHHHHHHHHHhh
Confidence 99983 678899999999887654
No 216
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.93 E-value=2e-23 Score=215.09 Aligned_cols=330 Identities=18% Similarity=0.167 Sum_probs=221.1
Q ss_pred eeeecccCCCCCChhHHHHHHHHHHHhCCCCCCcCcc--cCcchHHHHHHHHHHhHcCCC--cEEEEeccccccccchhh
Q psy16848 19 VTCRLSSVQYKVPKGGRKCLGEALEKFGTGAGGTRNI--SGNSLFHEKLEEDVAKLHQKE--AGLVFTSCYVANDSTLFT 94 (514)
Q Consensus 19 ~~~d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~~~~--~~i~~~sGt~a~~~~l~~ 94 (514)
.+.|-++... .++.+.+++.+.++.++...++.... .+.....+++++ + +++|.+ ..+|++|+|+++..++.+
T Consensus 29 iyld~~a~g~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~~~~ 105 (406)
T TIGR01814 29 IYLDGNSLGL-MPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLLLAS 105 (406)
T ss_pred EEecCCCcCc-CcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHHHHH
Confidence 4555444433 37789999999888776543322211 122334445544 4 788864 456666677777777777
Q ss_pred ccccC-CCceEEecCccchhhhhhhh----cCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 95 LGKMI-PGLHYISDAGNHASMIQGIR----NSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 95 l~~~~-~gd~v~~~~~~h~~~~~~~~----~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
+...+ +++.|+++..+|+++...+. ..|.+++..
T Consensus 106 ~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~----------------------------------------- 144 (406)
T TIGR01814 106 FYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEES----------------------------------------- 144 (406)
T ss_pred hcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccc-----------------------------------------
Confidence 64311 23478999999999764432 223332000
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec-----CCC
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR-----HND 244 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~-----~~d 244 (514)
.+.++ ..+
T Consensus 145 -------------------------------------------------------------------~~~~~~~~~g~~~ 157 (406)
T TIGR01814 145 -------------------------------------------------------------------MVQIEPREEETLR 157 (406)
T ss_pred -------------------------------------------------------------------eEEeccCCCCccC
Confidence 01111 014
Q ss_pred hhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEE
Q psy16848 245 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIIS 324 (514)
Q Consensus 245 ~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~ 324 (514)
.+.+++.+++ .+++|++|++++++|.+|...|+++|.++|+++|+++++|++|++|.. +.+....++|+++
T Consensus 158 ~~~l~~~~~~-~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~--------~id~~~~gvD~~~ 228 (406)
T TIGR01814 158 LEDILDTIEK-NGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNV--------PLDLHDWGVDFAC 228 (406)
T ss_pred HHHHHHHHHh-cCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCc--------ccccccCCCCEEE
Confidence 4556565543 246799999999999999999999999999999999999999998765 2221134789999
Q ss_pred cCCcccc-cCCCeEEEecHHHHHHHHhhcCce--------------------Ee-ccCCcHHHHHHHHHHHHHhhhchHH
Q psy16848 325 GTLGKAF-GNIGGYIVGTKNFIDTIRSYAAGF--------------------IF-TTSLPPTVLAGAREAIRILSSQEGV 382 (514)
Q Consensus 325 ~S~sK~l-g~~GG~l~~~~~~~~~l~~~~~~~--------------------~~-~~~~~~~~~~a~~~~l~~~~~~~~~ 382 (514)
+|.||++ |++||.++..++....+.+...++ .+ ..+.+...++++.++++.+.+.+.+
T Consensus 229 ~s~hK~l~g~pG~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~ 308 (406)
T TIGR01814 229 WCTYKYLNAGPGAGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGME 308 (406)
T ss_pred EcCccccCCCCCeEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHH
Confidence 9999998 455655554433333332211110 00 1235667778888899988777888
Q ss_pred HHHHHHHHHHHHHHHHHHhC-C----CccccC-----CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCc
Q psy16848 383 ELRAKHQDIVAYLRNELIQI-G----FPVEHT-----PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEE 452 (514)
Q Consensus 383 ~~~~~~~~~~~~l~~~L~~~-g----~~~~~~-----~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~ 452 (514)
+++++.+.+.+++.+.|++. + +.+..+ .++++.+.++ ....++.+.|. ++||.+.. ...+
T Consensus 309 ~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~--~~~~~~~~~L~-~~gi~v~~-------~~~~ 378 (406)
T TIGR01814 309 ALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP--VPGKAVFQALI-KRGVIGDK-------REPS 378 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec--CCHHHHHHHHH-HCCEEEec-------cCCC
Confidence 99999999999999999874 3 555443 2457777776 34678888985 89998752 2235
Q ss_pred EEEEEe-CCCCCHHHHHHHHHHHHHHH
Q psy16848 453 KIRLAP-TPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 453 ~iRl~~-~~~~t~e~id~~~~~l~~~l 478 (514)
.+|+++ +.++|++|+++++++|++++
T Consensus 379 ~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 379 VIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred eEEEechhccCCHHHHHHHHHHHHHHh
Confidence 899999 58999999999999998864
No 217
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.93 E-value=1.8e-23 Score=211.86 Aligned_cols=219 Identities=18% Similarity=0.269 Sum_probs=163.6
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEE
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDII 323 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~ 323 (514)
|.+.+++.+++. ++++++++.+++|++|...|+++|.++|++||+++|+|+++++|.. ++ +.. ..+.|++
T Consensus 112 d~~~l~~~l~~~--~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~-----~~-~~~--~~~~d~~ 181 (355)
T TIGR03301 112 DLNRIEEALAAD--PDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAI-----PI-DIE--ELDVDAL 181 (355)
T ss_pred CHHHHHHHHHhC--CCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCc-----cc-chh--hcCccEE
Confidence 455666666542 3467888899999999999999999999999999999999886643 11 112 2368999
Q ss_pred EcCCcccc-cCCC-eEEEecHHHHHHHHhhcCceE---------------eccCCcHHHHHHHHHHHHHhhhch-HHHHH
Q psy16848 324 SGTLGKAF-GNIG-GYIVGTKNFIDTIRSYAAGFI---------------FTTSLPPTVLAGAREAIRILSSQE-GVELR 385 (514)
Q Consensus 324 ~~S~sK~l-g~~G-G~l~~~~~~~~~l~~~~~~~~---------------~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~ 385 (514)
++|++|++ |+.| |+++.++++++.+......+. +..+.+...+.++.++++.+.+++ +++.+
T Consensus 182 ~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~ 261 (355)
T TIGR03301 182 IASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARI 261 (355)
T ss_pred EecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHH
Confidence 99999987 5567 999999999888763211110 112456777788888888775554 78888
Q ss_pred HHHHHHHHHHHHHHHhCCCccccC---CCc-EEEEEeCCC--ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeC
Q psy16848 386 AKHQDIVAYLRNELIQIGFPVEHT---PSH-IIPIKIGNP--ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPT 459 (514)
Q Consensus 386 ~~~~~~~~~l~~~L~~~g~~~~~~---~~~-~~~i~l~~~--~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~ 459 (514)
++++++++++.+.|++.|+.+..+ .++ ++++.++.. .+..++.+.|. ++||.+.++..+. .+++|+++.
T Consensus 262 ~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~i~~~~~~~----~~~iRis~~ 336 (355)
T TIGR03301 262 ARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELK-ERGFVIYPGKLTL----ADTFRIGTI 336 (355)
T ss_pred HHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHH-HCCEEEECCcccc----ccEEEEecC
Confidence 999999999999999888765433 223 456777642 34568888885 8999998765321 268999998
Q ss_pred CCCCHHHHHHHHHHHHHH
Q psy16848 460 PFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 460 ~~~t~e~id~~~~~l~~~ 477 (514)
..++++|++++++.|+++
T Consensus 337 ~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 337 GEIDAADIERLLEAIKDA 354 (355)
T ss_pred CCCCHHHHHHHHHHHHhh
Confidence 788999999999999875
No 218
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.93 E-value=2.6e-23 Score=211.41 Aligned_cols=221 Identities=18% Similarity=0.238 Sum_probs=165.6
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEE
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDII 323 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~ 323 (514)
|.+.+++.+++. ++++++.+.+++|+||...|+++|.++|+++|+++++|+++++|.. ++ +.. ..++|++
T Consensus 116 d~~~l~~~l~~~--~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~-----~~-~~~--~~~~D~~ 185 (363)
T TIGR02326 116 DVVEVEAILAAD--PAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGI-----PI-DIA--ELHIDYL 185 (363)
T ss_pred CHHHHHHHHhhC--CCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCc-----cc-chh--hcCccEE
Confidence 456666666542 3467888999999999999999999999999999999999986653 11 122 3478999
Q ss_pred EcCCcccc-cCCC-eEEEecHHHHHHHHhhcCceE----------------eccCCcHHHHHHHHHHHHHhhhc-hHHHH
Q psy16848 324 SGTLGKAF-GNIG-GYIVGTKNFIDTIRSYAAGFI----------------FTTSLPPTVLAGAREAIRILSSQ-EGVEL 384 (514)
Q Consensus 324 ~~S~sK~l-g~~G-G~l~~~~~~~~~l~~~~~~~~----------------~~~~~~~~~~~a~~~~l~~~~~~-~~~~~ 384 (514)
++|+||++ |++| |+++.+++.++.+......+. ..++.+...+.++.++++.+..+ +++++
T Consensus 186 ~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~ 265 (363)
T TIGR02326 186 ISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAAR 265 (363)
T ss_pred EecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHH
Confidence 99999988 5568 999999888776543211110 01245677788888888876544 47788
Q ss_pred HHHHHHHHHHHHHHHHhCCCccccC---CCc-EEEEEeCCC--ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEe
Q psy16848 385 RAKHQDIVAYLRNELIQIGFPVEHT---PSH-IIPIKIGNP--ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAP 458 (514)
Q Consensus 385 ~~~~~~~~~~l~~~L~~~g~~~~~~---~~~-~~~i~l~~~--~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~ 458 (514)
.++++++++++.+.|+++|+....+ .++ +.++.+++. .+..++.+.| +++||.++++..+ ..+.+|+++
T Consensus 266 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L-~~~gi~v~~g~~~----~~~~iRi~~ 340 (363)
T TIGR02326 266 HQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRL-KEQGFVIYPGKVS----QVDCFRIGN 340 (363)
T ss_pred HHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCCCCHHHHHHHH-HHCCEEEECCcCC----CCCEEEEec
Confidence 9999999999999999988776433 333 455776653 3567788888 4899999877642 246899998
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q psy16848 459 TPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 459 ~~~~t~e~id~~~~~l~~~l~ 479 (514)
...++.+|+++++++|++++.
T Consensus 341 ~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 341 IGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred CCCCCHHHHHHHHHHHHHHhC
Confidence 767899999999999998764
No 219
>PRK10534 L-threonine aldolase; Provisional
Probab=99.93 E-value=2.2e-24 Score=216.66 Aligned_cols=322 Identities=17% Similarity=0.214 Sum_probs=209.0
Q ss_pred eeecccCCCC-CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhcccc
Q psy16848 20 TCRLSSVQYK-VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKM 98 (514)
Q Consensus 20 ~~d~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~ 98 (514)
++|++++..- .+|.+.+++.+.... ...|+..+...++++.+++++|.+..+++++|++++..++.++..
T Consensus 1 ~~~~~~~~~~~p~~~~~~a~~~~~~~--------~~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~~- 71 (333)
T PRK10534 1 MIDLRSDTVTRPSRAMLEAMMAAPVG--------DDVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHCE- 71 (333)
T ss_pred CcccccccCCCCCHHHHHHHHhccCC--------CcccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhcC-
Confidence 4788765543 467787777553321 112334567899999999999999899999999998888877765
Q ss_pred CCCceEEecCccchhhhhh--hhcCC-CCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhh
Q psy16848 99 IPGLHYISDAGNHASMIQG--IRNSS-APKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQ 175 (514)
Q Consensus 99 ~~gd~v~~~~~~h~~~~~~--~~~~~-~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (514)
+||+|+++.+.|.....+ .+..+ .+++.++..+
T Consensus 72 -~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------- 107 (333)
T PRK10534 72 -RGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA------------------------------------------- 107 (333)
T ss_pred -CCCeeEEechhhhhHhcCCchHHhcCceEEeecCCC-------------------------------------------
Confidence 999999988887544321 11111 2222111100
Q ss_pred cCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhc
Q psy16848 176 HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENM 255 (514)
Q Consensus 176 ~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~ 255 (514)
. ...|.+.+++.+.+.
T Consensus 108 -------------------~---------------------------------------------~~~d~~~l~~~i~~~ 123 (333)
T PRK10534 108 -------------------D---------------------------------------------GTLPLDKVAAKIKPD 123 (333)
T ss_pred -------------------C---------------------------------------------CCCCHHHHHHhhccc
Confidence 0 011334444433221
Q ss_pred c--CCCceEEEEecCCCCCccccCH---HHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccc
Q psy16848 256 D--VKIPKLVAFETVHSMTGAICPL---KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKA 330 (514)
Q Consensus 256 ~--~~~~~~vv~~~~~nptG~~~~l---~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~ 330 (514)
. ..+++++++++++ +|.+.+. ++|.++|++|++++++||+|.++.....+.... ......|.++.||||.
T Consensus 124 ~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~---~~~~~~~~~~~s~SK~ 198 (333)
T PRK10534 124 DIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELK---EITQYCDSFTICLSKG 198 (333)
T ss_pred CcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHH---HHHhcCCEEEEEeEcC
Confidence 0 0157889988755 5999994 566788999999999999987432211111111 1111234445599999
Q ss_pred ccC-CCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccC
Q psy16848 331 FGN-IGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHT 409 (514)
Q Consensus 331 lg~-~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 409 (514)
++. .||++++++++++.+......+....+.+...++++.++++.. .+.+++..+.++++.+.|++.|+++..+
T Consensus 199 ~~~~~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~-----~~~~~~~~~~r~~l~~~L~~~g~~~~~~ 273 (333)
T PRK10534 199 LGTPVGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHN-----VARLQEDHDNAAWLAEQLREAGADVMRQ 273 (333)
T ss_pred CCCcccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHhCCCccCCC
Confidence 986 3457889999999888765443211223345566666666532 1233445556789999999999888777
Q ss_pred CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 410 PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 410 ~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
.++++++++++ ....++.+.| +++||.++++. .+|++.+..+|++++++++++|++++.
T Consensus 274 ~~nfv~~~~~~-~~~~~~~~~l-~~~gi~v~~~~---------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 274 DTNMLFVRVGE-EQAAALGEYM-RERNVLINASP---------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred CceEEEEECCc-hhHHHHHHHH-HHcCeeecCCc---------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 88888888764 2356777777 59999997542 478888766799999999999997764
No 220
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4.8e-23 Score=211.44 Aligned_cols=335 Identities=15% Similarity=0.123 Sum_probs=215.5
Q ss_pred ceeeecccCC--CCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC----CCcEEEEeccccccccc
Q psy16848 18 RVTCRLSSVQ--YKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ----KEAGLVFTSCYVANDST 91 (514)
Q Consensus 18 ~~~~d~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~~~i~~~sGt~a~~~~ 91 (514)
..++||..+. +...+.+.+++.+.++........+....|..++.+.+++.+.+..+ .++.++++++++++..+
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~ 112 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVA 112 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHH
Confidence 4568885433 22346777777776654221122222223444444444444443322 23445555556777777
Q ss_pred hhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhh
Q psy16848 92 LFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCE 171 (514)
Q Consensus 92 l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (514)
+.+++. +||.|+++.+.|......++..|.+++.++..+ +
T Consensus 113 ~~~l~~--~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~-~------------------------------------- 152 (394)
T PRK06836 113 LKAILN--PGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDT-D------------------------------------- 152 (394)
T ss_pred HHHhcC--CCCEEEEcCCCCccHHHHHHHcCCEEEEEecCC-c-------------------------------------
Confidence 777766 999999999988776655555555554433210 0
Q ss_pred hhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHH
Q psy16848 172 VSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQV 251 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~ 251 (514)
+. .-|.+.+++.
T Consensus 153 -----------------------~~---------------------------------------------~~d~~~l~~~ 164 (394)
T PRK06836 153 -----------------------TF---------------------------------------------QPDLDALEAA 164 (394)
T ss_pred -----------------------cC---------------------------------------------cCCHHHHHhh
Confidence 00 0033344443
Q ss_pred HhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHH------cCCEEEEeccccccccCCCCCCccccCCCccCceE
Q psy16848 252 LENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQ------HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDI 322 (514)
Q Consensus 252 l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~------~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di 322 (514)
+ +++++++++++++||||.++| +++|.++|++ ||+++|+||+|.....+... ...... ..+.++
T Consensus 165 ~----~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~--~~~~~~-~~~~~i 237 (394)
T PRK06836 165 I----TPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAE--VPYIFK-YYDNSI 237 (394)
T ss_pred c----CcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCC--CCChHH-ccCcEE
Confidence 3 456899999999999999999 6888888999 89999999999844332111 111111 125689
Q ss_pred EEcCCcccccCCC---eEEEecHHHHHH---HHhh---cCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy16848 323 ISGTLGKAFGNIG---GYIVGTKNFIDT---IRSY---AAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVA 393 (514)
Q Consensus 323 ~~~S~sK~lg~~G---G~l~~~~~~~~~---l~~~---~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 393 (514)
+++||||.++.+| ||+++++++.+. +... ..... ....+...+.++...++. . ..++.++++++
T Consensus 238 ~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~----~--~~~~~~~~~r~ 310 (394)
T PRK06836 238 VVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAALVFANRILG-FVNAPALMQRVVAKCLDA----T--VDVSIYKRNRD 310 (394)
T ss_pred EEecchhhccCcceeeEEEecCHHHhhhHHHHHHHHHHhhccc-cccCCHHHHHHHHHHhCC----h--HHHHHHHHHHH
Confidence 9999999999667 999998766432 1111 11110 124556666666655542 1 13566788888
Q ss_pred HHHHHHHhCCCccccCCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHH
Q psy16848 394 YLRNELIQIGFPVEHTPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVT 472 (514)
Q Consensus 394 ~l~~~L~~~g~~~~~~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~ 472 (514)
.+.+.|++.|+.+..+.++ ++++.++. .+..++++.| .++||.+.++..+.. .+++|++++ .++++++++++
T Consensus 311 ~l~~~L~~~g~~~~~~~gg~~~~~~~~~-~~~~~~~~~l-~~~gv~v~~g~~f~~---~~~iRi~~~--~~~~~~~~~i~ 383 (394)
T PRK06836 311 LLYDGLTELGFECVKPQGAFYLFPKSPE-EDDVAFCEKA-KKHNLLLVPGSGFGC---PGYFRLSYC--VDTETIERSLP 383 (394)
T ss_pred HHHHHHHhCCCEeecCCceEEEEEeCCC-CCHHHHHHHH-HhCCEEEECchhcCC---CCeEEEEec--CCHHHHHHHHH
Confidence 9999998888877666655 56666665 3577888888 489999999876432 469999998 57999999999
Q ss_pred HHHHHHHHc
Q psy16848 473 DLLAVWKSL 481 (514)
Q Consensus 473 ~l~~~l~~~ 481 (514)
+|+++++++
T Consensus 384 ~l~~~l~~~ 392 (394)
T PRK06836 384 AFEKLAKEY 392 (394)
T ss_pred HHHHHHHHh
Confidence 999998875
No 221
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.93 E-value=1.9e-23 Score=216.54 Aligned_cols=228 Identities=24% Similarity=0.311 Sum_probs=160.8
Q ss_pred CEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEeccccccccCCCCCCcc
Q psy16848 236 PKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIG 311 (514)
Q Consensus 236 ~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~ 311 (514)
....++.+|.+.+++.+.+. .+++++|++++.++.+|.+.+ +++|+++|++||+++|+||+|+....|..+ ..
T Consensus 173 ~~~~~~~~d~~~l~~~i~~~-~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~--~~ 249 (423)
T TIGR00713 173 LTLVLPYNDLEALEEVFEEY-GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGG--AQ 249 (423)
T ss_pred ceEEeCCCCHHHHHHHHHHc-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcch--hH
Confidence 45667778899999888753 356889999887777898877 799999999999999999999822433222 22
Q ss_pred ccCCCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCc-eEeccCCcHHHHHHHHHHHHHhhhch-HHHHHH
Q psy16848 312 ERDGQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAG-FIFTTSLPPTVLAGAREAIRILSSQE-GVELRA 386 (514)
Q Consensus 312 ~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~ 386 (514)
+..+. .+|++ +|+|.+++ | |++++++++.+.+...... ...+++.+++.++++.++|+.+.++. .++.++
T Consensus 250 ~~~~~--~pDi~--t~sK~l~~-G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~ 324 (423)
T TIGR00713 250 EYFGV--EPDLT--TLGKIIGG-GLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDE 324 (423)
T ss_pred HHhCC--Ccchh--hhhhhhcC-CCceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 33343 67877 89999985 5 9999999999888643211 11244789999999999999886543 334444
Q ss_pred HHHHHHHHHHHHHHhCCCccc-cCCCcEEEEEeCCC-------------ccHHHHHHHHHHhCCeEEecccCCCCCCCCc
Q psy16848 387 KHQDIVAYLRNELIQIGFPVE-HTPSHIIPIKIGNP-------------ALNTKICDMLLKEKGHYVQPINYPTVPVGEE 452 (514)
Q Consensus 387 ~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~i~l~~~-------------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~ 452 (514)
....+++.+.+.+++.++... ...+.++.+.+... .....+++.|+ ++||.+.+..+ +
T Consensus 325 ~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~-------~ 396 (423)
T TIGR00713 325 LAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLPPSQF-------E 396 (423)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEecCCc-------c
Confidence 444555555555555565442 35677777766421 01235778886 89999864321 3
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 453 KIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 453 ~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
.+|++++ +|++++++++++|+++++++
T Consensus 397 ~~~l~~~--~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 397 ACFLSAA--HTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred ceeeECC--CCHHHHHHHHHHHHHHHhhC
Confidence 5788876 79999999999999988653
No 222
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.93 E-value=3.9e-23 Score=210.53 Aligned_cols=224 Identities=17% Similarity=0.228 Sum_probs=166.9
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEE
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDII 323 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~ 323 (514)
|.+.+++.+++. ++++++.+++++||||...|+++|.++|+++|+++|+|+++++|.. ++ +.. ..++|++
T Consensus 118 d~~~l~~~l~~~--~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~-----~~-~~~--~~~~d~~ 187 (368)
T PRK13479 118 DAAEVEAALAAD--PRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAI-----PI-DIA--ELGIDAL 187 (368)
T ss_pred CHHHHHHHHHhC--CCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCc-----cc-ccc--ccCceEE
Confidence 455666655432 3467899999999999999999999999999999999988876542 11 112 3468999
Q ss_pred EcCCcccc-cCCC-eEEEecHHHHHHHHhhcCceEec---------------cCCcHHHHHHHHHHHHHhhhc-hHHHHH
Q psy16848 324 SGTLGKAF-GNIG-GYIVGTKNFIDTIRSYAAGFIFT---------------TSLPPTVLAGAREAIRILSSQ-EGVELR 385 (514)
Q Consensus 324 ~~S~sK~l-g~~G-G~l~~~~~~~~~l~~~~~~~~~~---------------~~~~~~~~~a~~~~l~~~~~~-~~~~~~ 385 (514)
++|++|++ |++| |++++++++++.+......+..+ .+.+...+.++.++++.+.++ ++++..
T Consensus 188 v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~ 267 (368)
T PRK13479 188 ISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARG 267 (368)
T ss_pred EecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 99999987 6678 99999999888876543221111 145666677777888766443 467888
Q ss_pred HHHHHHHHHHHHHHHhCCCccccC---CCc-EEEEEeCCC--ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeC
Q psy16848 386 AKHQDIVAYLRNELIQIGFPVEHT---PSH-IIPIKIGNP--ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPT 459 (514)
Q Consensus 386 ~~~~~~~~~l~~~L~~~g~~~~~~---~~~-~~~i~l~~~--~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~ 459 (514)
+++.++++++.+.|+++|+.+..+ ..+ ++.+.++.. .+..++.+.|. ++||.+.++..+ ..+++|++..
T Consensus 268 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~gi~v~~g~~~----~~~~iRis~~ 342 (368)
T PRK13479 268 ARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLK-EQGFVIYPGKLT----QVDTFRIGCI 342 (368)
T ss_pred HHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCCcCHHHHHHHHH-HCCEEEecCCCC----CCCEEEEecC
Confidence 999999999999999998776433 122 455655543 35678889995 899999876432 2458999986
Q ss_pred CCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 460 PFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 460 ~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
..++++|+++++++|++++++++
T Consensus 343 ~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 343 GDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcC
Confidence 67899999999999999998765
No 223
>PLN02672 methionine S-methyltransferase
Probab=99.93 E-value=2.7e-23 Score=228.33 Aligned_cols=338 Identities=13% Similarity=0.089 Sum_probs=227.3
Q ss_pred CCceeeeccc--CCCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC----cEEEEeccccc-c
Q psy16848 16 SNRVTCRLSS--VQYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE----AGLVFTSCYVA-N 88 (514)
Q Consensus 16 ~g~~~~d~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~----~~i~~~sGt~a-~ 88 (514)
+|..++++.. +++..+|.+.+++.+.+.+... ..+..++.+++.+++++.+|.+ ..+++++|+++ +
T Consensus 695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~-------s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL 767 (1082)
T PLN02672 695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQNI-------SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALF 767 (1082)
T ss_pred CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCC-------CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHH
Confidence 4556777743 4444578899999887765322 2245577889999999987753 25777778766 4
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
..++.++.. |||.|+++.++|......++..|++++.++....+ .|
T Consensus 768 ~lll~aLl~--pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~---------------------gf----------- 813 (1082)
T PLN02672 768 NKLVLCCVQ--EGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSD---------------------GF----------- 813 (1082)
T ss_pred HHHHHHHcC--CCCEEEEeCCChHHHHHHHHHcCCEEEEEeccccc---------------------CC-----------
Confidence 456677765 99999999999999888888777777655431000 00
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
..|++.+
T Consensus 814 -------------------------------------------------------------------------~lD~d~L 820 (1082)
T PLN02672 814 -------------------------------------------------------------------------KLTAKTL 820 (1082)
T ss_pred -------------------------------------------------------------------------CCCHHHH
Confidence 0133444
Q ss_pred HHHHhhccCCCceEEEEecCC-CCCccccC---HHHHHHHHHHcCCEEEEecccccccc-CCCC--CCccc---cCCC--
Q psy16848 249 TQVLENMDVKIPKLVAFETVH-SMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY-GEHG--AGIGE---RDGQ-- 316 (514)
Q Consensus 249 ~~~l~~~~~~~~~~vv~~~~~-nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~--~~~~~---~~~~-- 316 (514)
++.++. .+.+++++++|+ ||||.+++ +++|.++|++||++||+||+|+...+ +... .++.+ ....
T Consensus 821 e~al~~---~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~s 897 (1082)
T PLN02672 821 ASTLET---VKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSN 897 (1082)
T ss_pred HHHhcc---CCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhcccc
Confidence 444432 123477778876 99999999 78899999999999999999983332 2210 01111 0000
Q ss_pred ccCceEEEcCCcccccCCC---eEEEecH-HHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhh------hchHHHHHH
Q psy16848 317 LHNMDIISGTLGKAFGNIG---GYIVGTK-NFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILS------SQEGVELRA 386 (514)
Q Consensus 317 ~~~~di~~~S~sK~lg~~G---G~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~~~~~~~~~ 386 (514)
.....++++||||.++.+| ||+++++ ++++.+....... ......+.++.+++.... ..++.+.++
T Consensus 898 ks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s----~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~ 973 (1082)
T PLN02672 898 PSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLS----RPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKK 973 (1082)
T ss_pred CCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhc----CCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHH
Confidence 0125789999999999888 9999865 4888887643211 111222323333232110 234566788
Q ss_pred HHHHHHHHHHHHHHhCCCccccCCCcEE-EEEeCC-----------------CccHHHHHHHHHHhCCeEEecccCCCCC
Q psy16848 387 KHQDIVAYLRNELIQIGFPVEHTPSHII-PIKIGN-----------------PALNTKICDMLLKEKGHYVQPINYPTVP 448 (514)
Q Consensus 387 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~-~i~l~~-----------------~~~~~~~~~~Ll~~~GI~v~~~~~~~~~ 448 (514)
.++++++++.+.|++.|+.+..+.++++ ++.++. ..+..++++.|+++.||.+.||.++..
T Consensus 974 ~Lk~rRd~L~e~L~~~Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~- 1052 (1082)
T PLN02672 974 ILKSRAERLKETLEACGWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI- 1052 (1082)
T ss_pred HHHHHHHHHHHHHHHCCCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC-
Confidence 8999999999999999988877877644 444320 135678999998667999999976432
Q ss_pred CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 449 VGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 449 ~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
++++|++++ .+++++++++++|+++.+
T Consensus 1053 --~g~~RIsfa--~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1053 --PGYCRFSFA--LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred --CCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 579999998 478899999999998665
No 224
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.93 E-value=2.1e-23 Score=215.73 Aligned_cols=347 Identities=15% Similarity=0.127 Sum_probs=225.5
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC---CcEEEEeccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK---EAGLVFTSCYVA 87 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~---~~~i~~~sGt~a 87 (514)
+|+.++||.+. .-+| ||++.+++.+++++...... ...+ .+...++.+++++..+. ++.+|++||++|
T Consensus 39 dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~---~~~~-~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea 114 (425)
T PRK08088 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCF---QVLA-YEPYLELCEKMNQKVPGDFAKKTLLVTTGSEA 114 (425)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccc---cccC-CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHH
Confidence 66667777432 1223 89999999999998543211 1111 24556888888887753 477899999999
Q ss_pred cccchhhccc-cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccch
Q psy16848 88 NDSTLFTLGK-MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPL 166 (514)
Q Consensus 88 ~~~~l~~l~~-~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (514)
++.+++.... +++++.|.+++.+|.....+....+.. ..+...
T Consensus 115 ~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~-~~~~~~----------------------------------- 158 (425)
T PRK08088 115 VENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKV-NPYSAG----------------------------------- 158 (425)
T ss_pred HHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCC-CccccC-----------------------------------
Confidence 9999876543 345666677666776665554433211 000000
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec--CC-
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR--HN- 243 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~--~~- 243 (514)
.+ . ...+.....++ .+
T Consensus 159 -----------------------------~~-----------------~---------------~~~~~~~~~~p~~~~~ 177 (425)
T PRK08088 159 -----------------------------MG-----------------L---------------MPGHVYRALYPCPLHG 177 (425)
T ss_pred -----------------------------CC-----------------C---------------CCCCcEEcCCCccccC
Confidence 00 0 00000000011 11
Q ss_pred -----ChhHHHHHHhhc-cCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccc
Q psy16848 244 -----DVNHLTQVLENM-DVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGE 312 (514)
Q Consensus 244 -----d~~~l~~~l~~~-~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~ 312 (514)
+++.+++.++.. ..++.++++++++++..|...+ +++|+++|++||+++|+||+|+ +++.|... ..+
T Consensus 178 ~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~--~~~ 255 (425)
T PRK08088 178 VSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLF--AME 255 (425)
T ss_pred ccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh--HHh
Confidence 144566666532 2356889999999988787665 8999999999999999999999 33432210 111
Q ss_pred cCCCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHH
Q psy16848 313 RDGQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQ 389 (514)
Q Consensus 313 ~~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 389 (514)
..+. .+|+. ||||.+++ | ||+++++++++.+....... +.+.+++.++++.+.|+....+. ..++++
T Consensus 256 ~~~~--~pdi~--s~sK~l~~-G~rig~v~~~~~~~~~~~~~~~~~--t~~~~~~~~~a~~~~l~~~~~~~---~~~~~~ 325 (425)
T PRK08088 256 QMGV--AADLT--TFAKSIAG-GFPLAGVTGRAEVMDAIAPGGLGG--TYAGNPIACAAALAVLKVFEQEN---LLQKAN 325 (425)
T ss_pred hcCC--CCCEE--EEeccccC-CCcceeeEecHHHHhhcCCCCCCC--CCCcCHHHHHHHHHHHHHHHhcC---HHHHHH
Confidence 2232 56765 99999986 6 99999999999887654443 55788999999999999775444 444455
Q ss_pred HHHHHHHHHHHhC----CC-ccccCCCcEEEEEeCC--------CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEE
Q psy16848 390 DIVAYLRNELIQI----GF-PVEHTPSHIIPIKIGN--------PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRL 456 (514)
Q Consensus 390 ~~~~~l~~~L~~~----g~-~~~~~~~~~~~i~l~~--------~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl 456 (514)
+..+++.+.|.++ +. ..+...|.++++.+.+ .....++.+.++ ++||.+.+... ..+.+|+
T Consensus 326 ~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~-~~Gv~~~~~~~-----~~~~iRl 399 (425)
T PRK08088 326 ALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARAR-DKGLILLSCGP-----YYNVLRI 399 (425)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHH-hCCCEEecCCC-----CCCEEEE
Confidence 5555555544443 22 1223447788888732 233677888886 89998875332 1368999
Q ss_pred EeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 457 APTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 457 ~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+++..++++++++++++|++++++.
T Consensus 400 ~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 400 LVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred ECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 9998899999999999999998764
No 225
>PRK14012 cysteine desulfurase; Provisional
Probab=99.93 E-value=1.1e-23 Score=216.97 Aligned_cols=339 Identities=17% Similarity=0.138 Sum_probs=217.9
Q ss_pred eeeecccCCCCCChhHHHHHHHHHH---HhCCCCCCcC-cccCcchHHHHHHHHHHhHcCCCc--EEEEeccccccccch
Q psy16848 19 VTCRLSSVQYKVPKGGRKCLGEALE---KFGTGAGGTR-NISGNSLFHEKLEEDVAKLHQKEA--GLVFTSCYVANDSTL 92 (514)
Q Consensus 19 ~~~d~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~~~--~i~~~sGt~a~~~~l 92 (514)
.|.|.++.. .-++.+.+++.+.+. .++....... ......+..+++++.+++++|.+. +++++|||+++..++
T Consensus 5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l 83 (404)
T PRK14012 5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAI 83 (404)
T ss_pred EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHH
Confidence 455655544 235788898888886 2222111110 011123567889999999999754 677788889988877
Q ss_pred hhccc--cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHh
Q psy16848 93 FTLGK--MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELC 170 (514)
Q Consensus 93 ~~l~~--~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (514)
.++.. ..+||.|++++.+|.++...++..
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~------------------------------------------------- 114 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQL------------------------------------------------- 114 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHHHHHH-------------------------------------------------
Confidence 76641 248999999999998886443211
Q ss_pred hhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-CChhHHH
Q psy16848 171 EVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-NDVNHLT 249 (514)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~ 249 (514)
...|++++.++. .+...+.
T Consensus 115 ------------------------------------------------------------~~~g~~~~~v~~~~~g~~d~ 134 (404)
T PRK14012 115 ------------------------------------------------------------EREGFEVTYLDPQSNGIIDL 134 (404)
T ss_pred ------------------------------------------------------------HhCCCEEEEEccCCCCcCCH
Confidence 111333333331 1122222
Q ss_pred HHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcc
Q psy16848 250 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGK 329 (514)
Q Consensus 250 ~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK 329 (514)
+.+++..+++++++++++++|++|.+.|+++|.++|+++|+++|+|+++++|.. +......++|++++|++|
T Consensus 135 ~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~--------~~~~~~~~~D~~~~s~~K 206 (404)
T PRK14012 135 EKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKV--------PIDLSKLKVDLMSFSAHK 206 (404)
T ss_pred HHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCc--------ccCcccCCCCEEEEehhh
Confidence 333334455689999999999999999999999999999999999999997654 111113368999999999
Q ss_pred cccCCC-eEEEecHHHHHHHHhhcCceE----e-ccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-
Q psy16848 330 AFGNIG-GYIVGTKNFIDTIRSYAAGFI----F-TTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI- 402 (514)
Q Consensus 330 ~lg~~G-G~l~~~~~~~~~l~~~~~~~~----~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 402 (514)
.+|+.| |+++.+++....+.+...+.. + ..+.+.....+..++++... ....+..++.+++.+++.+.|++.
T Consensus 207 ~~gp~g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~ 285 (404)
T PRK14012 207 IYGPKGIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAK-EEMATENERIRALRDRLWNGIKDIE 285 (404)
T ss_pred ccCCCceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCC
Confidence 888766 887776654333322111100 1 11234444555556666553 345667788889999999998876
Q ss_pred CCccccC---C-Cc--EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCC----------------CCCcEEEEEeCC
Q psy16848 403 GFPVEHT---P-SH--IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVP----------------VGEEKIRLAPTP 460 (514)
Q Consensus 403 g~~~~~~---~-~~--~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~----------------~~~~~iRl~~~~ 460 (514)
++.+... . .+ ++++.+.+ ..++...| +++.+..+..|... ...+.+|++++.
T Consensus 286 ~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l---~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~ 359 (404)
T PRK14012 286 EVYLNGDLEQRVPGNLNVSFNYVE---GESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGR 359 (404)
T ss_pred CEEEeCCccccCCCEEEEEEeCcC---HHHHHHhC---CCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecC
Confidence 4443221 1 12 33444332 34565555 36666666544321 124789999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHcC
Q psy16848 461 FHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 461 ~~t~e~id~~~~~l~~~l~~~~ 482 (514)
.+|++|+|++++.|+++++.++
T Consensus 360 ~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 360 FTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987763
No 226
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=1.6e-23 Score=210.27 Aligned_cols=199 Identities=16% Similarity=0.166 Sum_probs=151.4
Q ss_pred ceEEEEecCCCCCccccCHHHH---HHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-
Q psy16848 260 PKLVAFETVHSMTGAICPLKEL---CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG- 335 (514)
Q Consensus 260 ~~~vv~~~~~nptG~~~~l~~l---~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G- 335 (514)
++++++++||||||.+++.+++ .+.|.+++.++|+||+|...... .++.... ..+..++++||||.+|.+|
T Consensus 131 ~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~---~s~~~~~--~~~~vi~l~SfSK~~gl~Gl 205 (339)
T PRK06959 131 LTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA---ASLAAHT--DRPGLVVLRSVGKFFGLAGV 205 (339)
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc---ccchhcc--CCCCEEEEecChhhcCCcch
Confidence 4689999999999999995555 45566789999999999943321 1122111 1245799999999999778
Q ss_pred --eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCCcE
Q psy16848 336 --GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPSHI 413 (514)
Q Consensus 336 --G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 413 (514)
||+++++++++.+......+ +.+.+.+.++.++|+. .+..++.++.++++++++.+.|++.|+.+. +.+.+
T Consensus 206 RiGy~v~~~~li~~l~~~~~~~----~vs~~~q~a~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~-~~~~f 278 (339)
T PRK06959 206 RAGFVLAAPALLAALRDALGAW----TVSGPARHAVRAAFAD--AAWQAAMRERLAADGARLAALLRAHGFAVH-ATPLF 278 (339)
T ss_pred heEEEecCHHHHHHHHHhcCCC----CCcHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcc-CcceE
Confidence 99999999999998876544 4677788888888863 345567889999999999999999987664 33445
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 414 IPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 414 ~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
+++.++ +..++.+.|. ++||.++... ..+++|++++ .+++++++++++|+++++.+.
T Consensus 279 ~~~~~~---~~~~l~~~l~-~~GI~vr~~~------~~~~lRisi~--~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 279 SWTDDP---RAAALHAALA-RRGIWTRYFA------PPPSVRFGLP--ADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred EEEeCC---CHHHHHHHHH-hCCeEEEECC------CCCeEEEECC--CCHHHHHHHHHHHHHHHHHHh
Confidence 567654 3578889895 8999997431 2358999984 378899999999999887764
No 227
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.93 E-value=5.8e-23 Score=212.58 Aligned_cols=343 Identities=19% Similarity=0.187 Sum_probs=223.4
Q ss_pred ceeeecccCCCCCChhHHHHHHHHHH-HhCCCCCCcCcccCcchHHHHHHH----HHHhHcCCCcE-EEEeccccccccc
Q psy16848 18 RVTCRLSSVQYKVPKGGRKCLGEALE-KFGTGAGGTRNISGNSLFHEKLEE----DVAKLHQKEAG-LVFTSCYVANDST 91 (514)
Q Consensus 18 ~~~~d~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~la~~~~~~~~-i~~~sGt~a~~~~ 91 (514)
+..+++.++.-.-+|++.+++.+.+. +|+.+.+++....|. +..+++++ .+++++|.+.. ++++|||+|+..+
T Consensus 25 ~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~al~~~ 103 (416)
T PRK00011 25 EEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGC-EYVDVVEQLAIDRAKELFGAEYANVQPHSGSQANAAV 103 (416)
T ss_pred hcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccc-hHHHHHHHHHHHHHHHHhCCCceeeecCCchHHHHHH
Confidence 45677744333357899999887754 555555555544442 33444444 89999998876 6668999999888
Q ss_pred hhhccccCCCceEEecCccchhhhhhh-----hcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccch
Q psy16848 92 LFTLGKMIPGLHYISDAGNHASMIQGI-----RNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPL 166 (514)
Q Consensus 92 l~~l~~~~~gd~v~~~~~~h~~~~~~~-----~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (514)
+.++.+ |||.|+++.++|.+..... ...|.+++.++.+. +
T Consensus 104 l~~l~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~-------------------------------- 148 (416)
T PRK00011 104 YFALLK--PGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-E-------------------------------- 148 (416)
T ss_pred HHHhcC--CCCEEEEeccccCCccccccccccccceeeEeecCcCc-c--------------------------------
Confidence 888865 9999999999997653211 11122222211100 0
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
-...|.+
T Consensus 149 -------------------------------------------------------------------------~~~~d~~ 155 (416)
T PRK00011 149 -------------------------------------------------------------------------TGLIDYD 155 (416)
T ss_pred -------------------------------------------------------------------------cCCcCHH
Confidence 0012556
Q ss_pred HHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcC
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGT 326 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S 326 (514)
.+++.+.+ .+++++++++. .+|...|+++|.++|+++|+++|+|++|..|..+... . +.. .. ..|++++|
T Consensus 156 ~l~~~i~~---~~~k~v~~~~~--~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~--~-~~~-~~-~~di~~~S 225 (416)
T PRK00011 156 EVEKLALE---HKPKLIIAGAS--AYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGV--H-PSP-VP-HADVVTTT 225 (416)
T ss_pred HHHHHHHh---cCCCEEEECCC--cCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCc--c-CCC-CC-CCcEEEec
Confidence 66666643 24677777543 3466778999999999999999999999866543211 0 111 12 56899999
Q ss_pred Ccccc-cCCCeEEEec-HHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCC
Q psy16848 327 LGKAF-GNIGGYIVGT-KNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGF 404 (514)
Q Consensus 327 ~sK~l-g~~GG~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 404 (514)
+||++ |+.||+++++ +++.+.+......+.++ +.....++++..++.....+++++.+++++++++++.+.|++.|+
T Consensus 226 ~~K~l~g~~gg~i~~~~~~~~~~l~~~~~~~~~~-~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 304 (416)
T PRK00011 226 THKTLRGPRGGLILTNDEELAKKINSAVFPGIQG-GPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGF 304 (416)
T ss_pred CCcCCCCCCceEEEeCCHHHHHHHHHHhCccccC-CccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99998 4567898885 68888887655443222 222333344333443333445678899999999999999999887
Q ss_pred cccc--CCCcEEEEEeCCC-ccHHHHHHHHHHhCCeEEecccCCC---CCCCCcEEEEEeC----CCCCHHHHHHHHHHH
Q psy16848 405 PVEH--TPSHIIPIKIGNP-ALNTKICDMLLKEKGHYVQPINYPT---VPVGEEKIRLAPT----PFHTREMIDKFVTDL 474 (514)
Q Consensus 405 ~~~~--~~~~~~~i~l~~~-~~~~~~~~~Ll~~~GI~v~~~~~~~---~~~~~~~iRl~~~----~~~t~e~id~~~~~l 474 (514)
.+.. +.++++++.+++. .+..++.+.| +++||.+..+..+. .+..+..+|++.. ..++++|++++++.|
T Consensus 305 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l 383 (416)
T PRK00011 305 RVVSGGTDNHLVLVDLRSKGLTGKEAEAAL-EEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELI 383 (416)
T ss_pred eeeecCCCCeEEEEeCcccCCCHHHHHHHH-HHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHH
Confidence 6643 3446777777532 2567788878 59999997433221 1223457898542 257899999999999
Q ss_pred HHHHHHc
Q psy16848 475 LAVWKSL 481 (514)
Q Consensus 475 ~~~l~~~ 481 (514)
++++...
T Consensus 384 ~~~~~~~ 390 (416)
T PRK00011 384 ADVLDNP 390 (416)
T ss_pred HHHHhcc
Confidence 9987753
No 228
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.92 E-value=4.6e-23 Score=210.43 Aligned_cols=322 Identities=17% Similarity=0.181 Sum_probs=221.0
Q ss_pred CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC--cEEEEeccccccccchhhccc----cCCCce
Q psy16848 30 VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE--AGLVFTSCYVANDSTLFTLGK----MIPGLH 103 (514)
Q Consensus 30 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~~i~~~sGt~a~~~~l~~l~~----~~~gd~ 103 (514)
.+|.+.+++.+.++.. .+.+....+..+..+++++.+++++|.+ ..+++++|++++..++.++.. -.+||.
T Consensus 32 ~~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 108 (373)
T TIGR03812 32 PHPIAVKAYDMFIETN---LGDPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPN 108 (373)
T ss_pred chHHHHHHHHHHhhcC---CCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcE
Confidence 4567777777765542 1212222355677899999999999975 357788889988877765531 137799
Q ss_pred EEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEee
Q psy16848 104 YISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVD 183 (514)
Q Consensus 104 v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (514)
|++++++|.+...+++..|.+++.++.++..
T Consensus 109 vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~------------------------------------------------- 139 (373)
T TIGR03812 109 IIVPESAHFSFEKAAEMLGLELRYAPLDEDY------------------------------------------------- 139 (373)
T ss_pred EEECCcchHHHHHHHHHcCCeEEEEeeCCCC-------------------------------------------------
Confidence 9999999999877777777766654431000
Q ss_pred ccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEE
Q psy16848 184 EVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLV 263 (514)
Q Consensus 184 ~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v 263 (514)
..|.+.+++.+.+ ++..+
T Consensus 140 ----------------------------------------------------------~~d~~~l~~~l~~----~~~~v 157 (373)
T TIGR03812 140 ----------------------------------------------------------TVDVKDVEDLIDD----NTIGI 157 (373)
T ss_pred ----------------------------------------------------------CcCHHHHHHHHhh----CcEEE
Confidence 0144445554432 34444
Q ss_pred EEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCC--CCCCccccCCCccCceEEEcCCcccc-cC--CCeEE
Q psy16848 264 AFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGE--HGAGIGERDGQLHNMDIISGTLGKAF-GN--IGGYI 338 (514)
Q Consensus 264 v~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~--~~~~~~~~~~~~~~~di~~~S~sK~l-g~--~GG~l 338 (514)
++..++|++|...|+++|.++|+++|+++|+|++|+.+.... .+......+-...+.|.+.+|.||+. ++ .||++
T Consensus 158 v~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~ 237 (373)
T TIGR03812 158 VGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGIL 237 (373)
T ss_pred EEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEE
Confidence 444468999999999999999999999999999998543210 00011111111236788888999964 23 22556
Q ss_pred EecHHHHHHHHhhcCceEec-------cCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCc-cccCC
Q psy16848 339 VGTKNFIDTIRSYAAGFIFT-------TSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFP-VEHTP 410 (514)
Q Consensus 339 ~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~ 410 (514)
+.++++++.+.... .+... .+.+....+++.++++.+.++++++..++..++++++.+.|+++++. +..+.
T Consensus 238 ~~~~~~~~~l~~~~-~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 316 (373)
T TIGR03812 238 FRSKSYLKYLSVDA-PYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEPV 316 (373)
T ss_pred EeCHHHHhhhcccC-cccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCC
Confidence 67888887764322 22111 13445667888888888767778889999999999999999998764 33455
Q ss_pred CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 411 SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 411 ~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
.+++.+.+++ ..++.+.|. ++||.++... .+.++|++++..+|++|+++++++|++
T Consensus 317 ~~~v~~~~~~---~~~v~~~L~-~~gi~v~~~~------~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 317 LNIVAFEVDD---PEEVRKKLR-DRGWYVSVTR------CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred ceEEEEEeCC---HHHHHHHHH-HCCceeccCC------CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 6677777664 457888895 8899997432 246899999989999999999999975
No 229
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=8.9e-24 Score=213.81 Aligned_cols=202 Identities=18% Similarity=0.140 Sum_probs=150.2
Q ss_pred CCceEEEEecCCCCCccccCHHHHHHHHHHc-CCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-
Q psy16848 258 KIPKLVAFETVHSMTGAICPLKELCEVSHQH-GALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG- 335 (514)
Q Consensus 258 ~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~-gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G- 335 (514)
++++++++++|+||||.+++.+++.++++.. ++++|+||+|....... ....... ..+..+++.||||++|.+|
T Consensus 146 ~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~---s~~~~~~-~~~~~iv~~S~SK~~~l~Gl 221 (354)
T PRK04635 146 DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEY---SVADLLA-SYPNLVVLRTLSKAFALAGA 221 (354)
T ss_pred cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCc---chHHHHh-hCCCEEEEechHHHhhhhHH
Confidence 4689999999999999999999999988874 79999999998432111 1111111 1245788999999999768
Q ss_pred --eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCC-CccccCCCc
Q psy16848 336 --GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIG-FPVEHTPSH 412 (514)
Q Consensus 336 --G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~ 412 (514)
||+++++++++.+......+ +.+...+.++.++++....+.+.+.++.++++++++.+.|++++ +.+.++.+.
T Consensus 222 RlG~~i~~~~~~~~l~~~~~~~----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~ 297 (354)
T PRK04635 222 RCGFTLANEELIEILMRVIAPY----PVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNGN 297 (354)
T ss_pred HHhhhhCCHHHHHHHHhhcCCC----CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCc
Confidence 99999999999887654333 45666666667766532123345667778888999999999884 776777778
Q ss_pred EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 413 IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 413 ~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
++++++++ ..++.+.| +++||.++.+.. ...++++|++++ +.+|+++++++|++-
T Consensus 298 f~~~~~~~---~~~~~~~l-~~~gv~v~~~~~---~~~~~~lRis~~---~~e~~~~l~~al~~~ 352 (354)
T PRK04635 298 YVLAKFDD---VDAVFKAL-WDAGIVARAYKD---PRLANCIRFSFS---NRAETDKLIGLIRNQ 352 (354)
T ss_pred EEEEECCC---HHHHHHHH-HHCCEEEEECCC---CCCCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 88887763 56787777 599999985432 223569999997 899999999999753
No 230
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=4.3e-23 Score=209.38 Aligned_cols=205 Identities=18% Similarity=0.140 Sum_probs=153.5
Q ss_pred CCCceEEEEecCCCCCccccCHHHHHHHHHH--cCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCC
Q psy16848 257 VKIPKLVAFETVHSMTGAICPLKELCEVSHQ--HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI 334 (514)
Q Consensus 257 ~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~--~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~ 334 (514)
.++++++++++|+||||.+++.+++.++++. +++++|+||+|....... ....... ..+..++++||||.+|.+
T Consensus 150 ~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~---~~~~~~~-~~~~vi~~~SfSK~~gl~ 225 (364)
T PRK04781 150 ASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVP---SAVGLLA-RYDNLAVLRTLSKAHALA 225 (364)
T ss_pred ccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCc---chHHHHh-hCCCEEEEecChhhcccc
Confidence 4568999999999999999998777777765 479999999998433211 1111111 225689999999999976
Q ss_pred C---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCc-cccC
Q psy16848 335 G---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFP-VEHT 409 (514)
Q Consensus 335 G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~ 409 (514)
| ||+++++++++.+.+....+ +.+.+.+.++..+|+........+.++.++++++.+.+.|+++ ++. +.++
T Consensus 226 GlRvGy~v~~~~l~~~l~~~~~~~----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~ 301 (364)
T PRK04781 226 AARIGSLIANAELIAVLRRCQAPY----PVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPS 301 (364)
T ss_pred cceeeeeeCCHHHHHHHHhccCCC----CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC
Confidence 8 99999999999998776544 4566677777777753211234455667788999999999887 654 4556
Q ss_pred CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 410 PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 410 ~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
.+.++++++++ ..++.+.+ .++||.++++..+. ...+++|++++ +++++++++++|+++.
T Consensus 302 ~g~f~~~~~~~---~~~~~~~l-~~~gI~v~~~~~~~--~~~~~~Ris~~---~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 302 QGNFLLVRFDD---AEAAFQAL-LAAGVVVRDQRAAP--RLSDALRITLG---TPEQNDRVLAALQRTQ 361 (364)
T ss_pred CCcEEEEEcCC---HHHHHHHH-HHCCeEEeeCCCCC--CCCCeEEEeCC---CHHHHHHHHHHHHHHH
Confidence 77788888863 56788888 49999999886432 23579999998 7999999999998754
No 231
>PRK08354 putative aminotransferase; Provisional
Probab=99.92 E-value=1.4e-22 Score=201.19 Aligned_cols=293 Identities=20% Similarity=0.130 Sum_probs=192.8
Q ss_pred eeeecccC-CCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccc-cccccchhhcc
Q psy16848 19 VTCRLSSV-QYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCY-VANDSTLFTLG 96 (514)
Q Consensus 19 ~~~d~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt-~a~~~~l~~l~ 96 (514)
..+|++.+ +.+.+|.+.+++.+.+.... . +. ....+++.++++++. . +++++|+ +++..++ .+.
T Consensus 9 ~~i~l~~~~np~~p~~~~~a~~~~~~~~~----~--yp-----~~~~l~~~ia~~~~~-~-I~vt~G~~~al~~~~-~~~ 74 (311)
T PRK08354 9 GLIDFSASVNPYPPEWLDEMFERAKEISG----R--YT-----YYEWLEEEFSKLFGE-P-IVITAGITEALYLIG-ILA 74 (311)
T ss_pred ceeEecCCCCCCCCHHHHHHHHHHHHHhh----c--CC-----ChHHHHHHHHHHHCC-C-EEECCCHHHHHHHHH-Hhh
Confidence 47888655 44456788888877655321 1 11 135688899999884 3 5566665 4554444 443
Q ss_pred ccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhc
Q psy16848 97 KMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQH 176 (514)
Q Consensus 97 ~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (514)
. +||.|+++.++|......++..|.+++.++. |++.+
T Consensus 75 ~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~-d~~~l---------------------------------------- 111 (311)
T PRK08354 75 L--RDRKVIIPRHTYGEYERVARFFAARIIKGPN-DPEKL---------------------------------------- 111 (311)
T ss_pred C--CCCeEEEeCCCcHHHHHHHHHcCCEEeecCC-CHHHH----------------------------------------
Confidence 3 8999999999999999888888887765432 33333
Q ss_pred CceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhcc
Q psy16848 177 GALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMD 256 (514)
Q Consensus 177 ~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~ 256 (514)
++.++
T Consensus 112 ------------------------------------------------------------------------~~~~~--- 116 (311)
T PRK08354 112 ------------------------------------------------------------------------EELVE--- 116 (311)
T ss_pred ------------------------------------------------------------------------HHhhc---
Confidence 22221
Q ss_pred CCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC
Q psy16848 257 VKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN 333 (514)
Q Consensus 257 ~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~ 333 (514)
+++++++++|+||||.+++ +++|.++|+++|+++|+||+|.....+... ...+..++++||||.++.
T Consensus 117 --~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~--------~~~~~vi~~~S~SK~~~l 186 (311)
T PRK08354 117 --RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPES--------PEGENIIKLRTFTKSYGL 186 (311)
T ss_pred --CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccc--------cCCCcEEEEeccHhhcCC
Confidence 2467888999999999999 688888899999999999999843332111 113578999999999997
Q ss_pred CC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCC
Q psy16848 334 IG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTP 410 (514)
Q Consensus 334 ~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 410 (514)
+| ||+++ +.+.++.....+ ..+...++++.+.++.. .+.+.+.++.+.+.++.+.+.+ ...+.
T Consensus 187 ~GlRiG~~v~---~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l------~~~~~ 252 (311)
T PRK08354 187 PGIRVGYVKG---FEEAFRSVRMPW----SIGSTGYAFLEFLIEDD-FEHLRKTMPLIWREKERFEKAL------YVKSD 252 (311)
T ss_pred ccceeeeeee---hHHHHHHcCCCc----cCCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHhc------CCCCC
Confidence 78 99988 455555544333 34444444444444311 1122223333333333322221 23466
Q ss_pred CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 411 SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 411 ~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
++++.+.++ +..++++.|. ++||.+.++..+.. .+++|++++ ++++.++++++++++
T Consensus 253 ~~~~~~~~~---~~~~~~~~l~-~~gv~v~~g~~f~~---~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 253 ANFFIKDVG---DAEKFVEFLK-RNGILVRDCTSFGL---PGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred CcEEEEECC---CHHHHHHHHH-HCCeEEEecccCCC---CCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 777766654 3578888885 89999999987532 479999999 788889998888875
No 232
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.92 E-value=1.6e-23 Score=215.61 Aligned_cols=298 Identities=14% Similarity=0.123 Sum_probs=199.1
Q ss_pred ccCcchHHHHHHHHHHhHcCCC--cEEEEeccccccccc-hhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCC
Q psy16848 55 ISGNSLFHEKLEEDVAKLHQKE--AGLVFTSCYVANDST-LFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHN 131 (514)
Q Consensus 55 ~~~~~~~~~~~~~~la~~~~~~--~~i~~~sGt~a~~~~-l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~ 131 (514)
..|..++.+++++++++++|.+ .+++++||+++...+ +.++...++||+|++++++|.+...+++..+..
T Consensus 59 ~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~------- 131 (398)
T cd00613 59 SQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEP------- 131 (398)
T ss_pred hhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhccc-------
Confidence 4567788999999999999876 566777677654444 333433224999999999999988776655410
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHH
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDII 211 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~ 211 (514)
T Consensus 132 -------------------------------------------------------------------------------- 131 (398)
T cd00613 132 -------------------------------------------------------------------------------- 131 (398)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhccCCceeeecchHHHHhhCCCCEEEecCC-ChhHHHHHHhhccCCCceEEEEecCCCCCccccC-HHHHHHHHHHcC
Q psy16848 212 SGTLVNPEVAIHASMIQGIRNSSAPKIIYRHN-DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP-LKELCEVSHQHG 289 (514)
Q Consensus 212 ~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~-l~~l~~l~~~~g 289 (514)
.|++++.++.+ +.....+.+++..++++++|++++++ ++|.+.+ +++|.++|++||
T Consensus 132 ---------------------~g~~~~~v~~~~~~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g 189 (398)
T cd00613 132 ---------------------LGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSAG 189 (398)
T ss_pred ---------------------CCcEEEEeccCCCCCcCHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhcC
Confidence 01222223211 11111233333335678999999985 8999988 599999999999
Q ss_pred CEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC-----CC-eEEEecHHHHHHHHhhcC----------
Q psy16848 290 ALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN-----IG-GYIVGTKNFIDTIRSYAA---------- 353 (514)
Q Consensus 290 v~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~-----~G-G~l~~~~~~~~~l~~~~~---------- 353 (514)
+++|+|++++.+.. . .... ..++|++++|+||++++ +| |+++.++++++.+.....
T Consensus 190 ~~livD~~~~~~~~-~-----~~~~--~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (398)
T cd00613 190 ALVYVDGDNLNLTG-L-----KPPG--EYGADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNR 261 (398)
T ss_pred CEEEEEeccccccC-C-----CChH--HcCCCEEEeeccccCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCc
Confidence 99999999874431 0 0111 23689999999999832 23 889998888776522100
Q ss_pred -----------------ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCcccc--CCCcEE
Q psy16848 354 -----------------GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEH--TPSHII 414 (514)
Q Consensus 354 -----------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~ 414 (514)
......+.+...+.++..++..+.++++++++++++++.+++.+.|++++..... +..+.+
T Consensus 262 ~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v 341 (398)
T cd00613 262 AFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEF 341 (398)
T ss_pred ceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEE
Confidence 0000112334555555566666656677889999999999999999987543211 122334
Q ss_pred EEEeCC--CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHH
Q psy16848 415 PIKIGN--PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDL 474 (514)
Q Consensus 415 ~i~l~~--~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l 474 (514)
.+.++. ..+..++++.|+ ++||.+.... +...+.+|++++.++|++|+|+++++|
T Consensus 342 ~~~~~~~~~~~~~~~~~~L~-~~gi~~~~~~----~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 342 VLRLPPLYGIRAEDLAKALI-DGGFHAPTMY----LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred EEEcCCcchHHHHHHHHhhh-hcCccccccc----cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 566654 345678999996 8999864321 234578999999999999999998764
No 233
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=4.7e-23 Score=206.59 Aligned_cols=308 Identities=15% Similarity=0.093 Sum_probs=216.0
Q ss_pred CCceeeeccc--CCCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC----CcEEEEeccc-ccc
Q psy16848 16 SNRVTCRLSS--VQYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK----EAGLVFTSCY-VAN 88 (514)
Q Consensus 16 ~g~~~~d~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~i~~~sGt-~a~ 88 (514)
.+...+|+.. +++..+|.+.+++.+.+.. +. ...+ . .....++++.++++++. +..+++++|+ +++
T Consensus 17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~-~~-~~~Y----~-~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i 89 (335)
T PRK14808 17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNS-DT-LRIY----Y-DSPDEELIEKILSYLDTDFLSKNNVSVGNGADEII 89 (335)
T ss_pred CCCceeEecCCCCCCCCCHHHHHHHHHHhhh-hh-hhcC----C-CCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHH
Confidence 4556788854 3344477889888887653 11 1101 1 11256788888888762 3346666665 556
Q ss_pred ccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 89 DSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 89 ~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
..++.++ |.|++++++|......++..|.+++.++..+
T Consensus 90 ~~~~~~~------d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~------------------------------------ 127 (335)
T PRK14808 90 YVMMLMF------DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK------------------------------------ 127 (335)
T ss_pred HHHHHHh------CcEEECCCCHHHHHHHHHHcCCeEEEecCCC------------------------------------
Confidence 5555444 5689999999998888888887776554311
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
++...
T Consensus 128 ---------------------------------------------------------------------------~~~~~ 132 (335)
T PRK14808 128 ---------------------------------------------------------------------------DLRIP 132 (335)
T ss_pred ---------------------------------------------------------------------------cCCCC
Confidence 00000
Q ss_pred HHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCc
Q psy16848 249 TQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLG 328 (514)
Q Consensus 249 ~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~s 328 (514)
+..+ ++++++++++||||||.+++.+++.+++ ++++++|+||+|.... +.. ..+... ..+..++++|||
T Consensus 133 ~~~~-----~~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~-~~~---~~~~~~-~~~~vi~~~S~S 201 (335)
T PRK14808 133 EVNV-----GEGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFH-GES---YVDLLK-KYENLAVIRTFS 201 (335)
T ss_pred hhHc-----cCCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhc-CCc---hHHHHH-hCCCEEEEEech
Confidence 0011 2357999999999999999999999998 5899999999998432 211 111111 124689999999
Q ss_pred ccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCc
Q psy16848 329 KAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFP 405 (514)
Q Consensus 329 K~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 405 (514)
|.++.+| ||+++++++++.+......+ +.+.+.+.++.++++.. +...+.++.+.++++++.+.|++.|+.
T Consensus 202 K~~~l~GlRvG~~v~~~~~~~~l~~~~~~~----~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~g~~ 275 (335)
T PRK14808 202 KAFSLAAQRIGYVVSSEKFIDAYNRVRLPF----NVSYVSQMFAKVALDHR--EIFEERTKFIVEERERMKSALREMGYR 275 (335)
T ss_pred hhccCcccceEEEEeCHHHHHHHHHhcCCC----CCCHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCE
Confidence 9999778 99999999999987765333 45667777777777632 344566677778888999999998888
Q ss_pred cccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 406 VEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 406 ~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
+..+.++++++.++. .+..++.+.|. ++||.++.. ..++|++++ +.++++++++.|+++
T Consensus 276 ~~~~~g~f~~~~l~~-~~~~~~~~~l~-~~Gi~V~~~--------~~~~Risi~---~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 276 ITDSRGNFVFIFMEK-EEKERLLEHLR-AKNIAVRSF--------REGVRITIG---KREENDMILKELEVF 334 (335)
T ss_pred ECCCCCeEEEEeCCC-ccHHHHHHHHH-HCCeEEEEC--------CCCeEEecC---CHHHHHHHHHHHHhh
Confidence 777888899988874 34577888885 899999842 247999998 789999999998753
No 234
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.92 E-value=2.4e-23 Score=214.16 Aligned_cols=213 Identities=20% Similarity=0.258 Sum_probs=156.7
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCcc
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLH 318 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~ 318 (514)
+++.+++.+++. .+++++|++++++...|...+ +++|+++|++||+++|+||+++ +|..|..+ ..+.+++..
T Consensus 237 ~l~~l~~~l~~~-~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~f--a~e~~gv~~ 313 (464)
T TIGR00699 237 CLEEVEDLIKKW-HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFW--AHEHWNLDD 313 (464)
T ss_pred HHHHHHHHHHhc-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchh--HHHhcCCCC
Confidence 456667777643 345899999999999999987 9999999999999999999997 54433211 234445433
Q ss_pred CceEEEcCCcccccCCCeEEEecHHHHHHHHhhcC-ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy16848 319 NMDIISGTLGKAFGNIGGYIVGTKNFIDTIRSYAA-GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRN 397 (514)
Q Consensus 319 ~~di~~~S~sK~lg~~GG~l~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 397 (514)
.+|++ +++|++++ ||+++.++. +..... ....++..++..++++.++|+.+.++. +.++.+++.+++.+
T Consensus 314 ~PDi~--t~gK~lg~-gG~~~~~~~----~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~ 383 (464)
T TIGR00699 314 PPDMV--TFSKKFQT-AGYFFHDPA----FRPNKPYRQFNTWMGDPSRALILREIIQEIKRKD---LLENVAHVGDYLYT 383 (464)
T ss_pred CCCEE--Eehhhhcc-CCccccchh----ccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHH
Confidence 49998 89999975 455544432 211111 122255789999999999999886655 77788888888888
Q ss_pred HHHhC--CCc-c---cc--CCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHH
Q psy16848 398 ELIQI--GFP-V---EH--TPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDK 469 (514)
Q Consensus 398 ~L~~~--g~~-~---~~--~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~ 469 (514)
.|+++ .++ . +. ..|.++.+.+++......+.+.++ ++|+++.+. +.+.+|+.++..+|++|+++
T Consensus 384 ~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~-~~Gvl~~~~-------g~~~ir~~Ppl~it~~eid~ 455 (464)
T TIGR00699 384 GLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEAKRDKLLKKAR-NNGVNIGGC-------GVKAIRLRPMLVFQKHHADI 455 (464)
T ss_pred HHHHHHHhCCCceeeecccCeEEEEEEecCCHHHHHHHHHHHH-HCCcEEecC-------CCCeEEEeCCCCCCHHHHHH
Confidence 88775 243 1 23 567788898876444678888886 899998632 34689999999999999999
Q ss_pred HHHHHHHH
Q psy16848 470 FVTDLLAV 477 (514)
Q Consensus 470 ~~~~l~~~ 477 (514)
++++|.++
T Consensus 456 ~~~~l~~~ 463 (464)
T TIGR00699 456 FLEIISKI 463 (464)
T ss_pred HHHHHHHh
Confidence 99999875
No 235
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.92 E-value=2.6e-23 Score=210.36 Aligned_cols=324 Identities=15% Similarity=0.166 Sum_probs=216.5
Q ss_pred CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCc
Q psy16848 30 VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAG 109 (514)
Q Consensus 30 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~ 109 (514)
.++++.+++.+.+..| .+..+..+++++++++++|.+++++++|||+|+.+++.++.. +||+++++.
T Consensus 25 ~~~~v~~a~~~~~~~~----------~~~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~~--~Gd~~~~~~- 91 (363)
T TIGR01437 25 VSDEVADAQKRGAQNY----------FEIKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVIT--RGNRYLVEN- 91 (363)
T ss_pred CCHHHHHHHHHHHhcC----------CCHHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHhc--CCCcchhhc-
Confidence 3789999998887643 134588899999999999999999999999999999999876 999888875
Q ss_pred cchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccc
Q psy16848 110 NHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVG 189 (514)
Q Consensus 110 ~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (514)
.|.+.... ..+|....+|...+
T Consensus 92 ~~~s~~~~------------------------------~eVi~~~~~~~~~~---------------------------- 113 (363)
T TIGR01437 92 LHDSKIEV------------------------------NEVVLPKGHNVDYG---------------------------- 113 (363)
T ss_pred cccccccc------------------------------ceEEEECccchhcC----------------------------
Confidence 56554311 11111111111000
Q ss_pred ccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEE-EecC
Q psy16848 190 LYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVA-FETV 268 (514)
Q Consensus 190 ~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv-~~~~ 268 (514)
.++...+.+.|+++++++.. .....+.+++..+++|++++ ++++
T Consensus 114 ----------------------------------~~~~~~~~~~g~~~v~v~~~-~~~d~~~le~ai~~~t~ai~~v~~~ 158 (363)
T TIGR01437 114 ----------------------------------APVETMVRLGGGKVVEAGYA-NECSAEQLEAAITEKTAAILYIKSH 158 (363)
T ss_pred ----------------------------------CchHHHHHhcCCeEEEEcCC-CCCCHHHHHHhcChhceEEEEEecC
Confidence 02234556788888888742 23444555555567788766 5778
Q ss_pred CCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc-CCCeEEEecHHHHHH
Q psy16848 269 HSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG-NIGGYIVGTKNFIDT 347 (514)
Q Consensus 269 ~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg-~~GG~l~~~~~~~~~ 347 (514)
+||+|.+.|+++|.++|++||+++|+|++|+... .... ..+.|++++|+||+++ +.+|++++++++++.
T Consensus 159 ~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~--------~~~~--~~g~D~~~~S~~K~l~gp~~G~l~~~~~~i~~ 228 (363)
T TIGR01437 159 HCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL--------QKYY--RLGADLVIYSGAKAIEGPTSGLVLGKKKYIEW 228 (363)
T ss_pred CCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch--------HHHH--HcCCCEEEEeCCcccCCCceEEEEEcHHHHHH
Confidence 8999999999999999999999999999997211 0011 2257999999999884 456999998888887
Q ss_pred HHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccC--C-Cc---EEEEEeC-
Q psy16848 348 IRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHT--P-SH---IIPIKIG- 419 (514)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~-~~---~~~i~l~- 419 (514)
++....+............+++.++++.+.+.. .+..+...++.+++.+.|+++ |+.+... . +. .+.+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~-~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~ 307 (363)
T TIGR01437 229 VKLQSKGIGRAMKVGKENILGLTAALEQYLSTG-KESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDE 307 (363)
T ss_pred HHhccCCCcceeccCHHHHHHHHHHHHHHHccC-cccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEec
Confidence 754332221111222234556666776654322 234445556677899999987 7765421 1 11 1223333
Q ss_pred --CCccHHHHHHHHHHhCC--eEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 420 --NPALNTKICDMLLKEKG--HYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 420 --~~~~~~~~~~~Ll~~~G--I~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
.+.+..++.+.| ++++ |.+++ + ....+.+|+.+.. ++++|++.++++|+++
T Consensus 308 ~~~g~~~~~l~~~L-~~~~~~I~~r~--~---~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 308 SELGMTAADVVQAL-RQGEPAIYTRG--Y---KANEGIIEIDPRS-VTGGQLDIIVERIREI 362 (363)
T ss_pred cCCCCCHHHHHHHH-hcCCCCEEEee--e---eecCCeEEEEeec-CCHHHHHHHHHHHHHh
Confidence 245678999999 4777 66654 1 1224578998884 6799999999999876
No 236
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=9.3e-24 Score=213.28 Aligned_cols=283 Identities=16% Similarity=0.108 Sum_probs=198.6
Q ss_pred HHHHHHHHHhHcCCCc-EEEEecc-ccccccchhhccccCCC-ceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 62 HEKLEEDVAKLHQKEA-GLVFTSC-YVANDSTLFTLGKMIPG-LHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 62 ~~~~~~~la~~~~~~~-~i~~~sG-t~a~~~~l~~l~~~~~g-d~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
..++++++++++|.+. .|++++| ++++..++.++.. +| |.|+++.++|......++..|++++.++..+ +
T Consensus 59 ~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~--~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~-~---- 131 (351)
T PRK01688 59 PKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCE--PGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD-N---- 131 (351)
T ss_pred hHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcC--CCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC-C----
Confidence 4788999999988542 3555555 5667777777755 76 8999999999877666666666555433210 0
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
|
T Consensus 132 ------------------~------------------------------------------------------------- 132 (351)
T PRK01688 132 ------------------W------------------------------------------------------------- 132 (351)
T ss_pred ------------------C-------------------------------------------------------------
Confidence 0
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHc--CCEEEEec
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQH--GALTFVDE 296 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~--gv~li~De 296 (514)
..|.+.+++.+ ++++++++++|+||||..++.+++.++++.. ++++|+||
T Consensus 133 -----------------------~~d~~~l~~~~-----~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDE 184 (351)
T PRK01688 133 -----------------------QLDLPAIADNL-----DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADE 184 (351)
T ss_pred -----------------------CCCHHHHHHhc-----cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEEC
Confidence 01333333332 3578999999999999999977766666543 68999999
Q ss_pred cccccccCCCCCCccccCCCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 297 VHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 297 a~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
+|....... ....... ..+..+++.||||++|.+| ||+++++++++.+.+....+ +.+.+.+.++.++|
T Consensus 185 ay~~f~~~~---s~~~~~~-~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~----~v~~~~~~~a~~~L 256 (351)
T PRK01688 185 AYIEFCPQA---SLAGWLA-EYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPY----PLSTPVADIAAQAL 256 (351)
T ss_pred chhhcCCCC---ChHHHHh-hCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCC----CCCHHHHHHHHHHH
Confidence 998433111 1111111 2256899999999999878 99999999999888766554 45666666666776
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCc-cccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCC
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFP-VEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGE 451 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~ 451 (514)
+....+.+.+.++.+.+.++++.+.|+++ ++. +.++.++++++.++ +..++.+.|+ ++||.++++..+. ..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~---~~~~l~~~L~-~~gi~vr~~~~~~--~~~ 330 (351)
T PRK01688 257 SPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT---ASSAVFKSLW-DQGIILRDQNKQP--GLS 330 (351)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC---CHHHHHHHHH-HCCeEEEECCCcC--CCC
Confidence 53212345667778888899999999988 664 55667778888775 3678999996 8999998755321 235
Q ss_pred cEEEEEeCCCCCHHHHHHHHHHHH
Q psy16848 452 EKIRLAPTPFHTREMIDKFVTDLL 475 (514)
Q Consensus 452 ~~iRl~~~~~~t~e~id~~~~~l~ 475 (514)
+++|++++ +++|+++++++|+
T Consensus 331 ~~iRis~~---~~~e~~~l~~al~ 351 (351)
T PRK01688 331 NCLRITIG---TREECQRVIDALR 351 (351)
T ss_pred CeEEEeCC---CHHHHHHHHHhhC
Confidence 79999999 7899999998873
No 237
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.92 E-value=1.5e-22 Score=209.56 Aligned_cols=216 Identities=17% Similarity=0.140 Sum_probs=155.7
Q ss_pred CCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC
Q psy16848 257 VKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN 333 (514)
Q Consensus 257 ~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~ 333 (514)
.++++++++++||||||.+++ +++|.++|+++++++|+||+|........ +........+..++++||||. +.
T Consensus 177 ~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~---~~~~~~~~~~~vI~~~SfSK~-~~ 252 (416)
T PRK09440 177 DEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGII---FSEATPLWNPNIILCMSLSKL-GL 252 (416)
T ss_pred CCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcc---hhhcCccccCCeEEEeccccc-CC
Confidence 346789999999999999999 78899999999999999999973221100 001100013568999999996 66
Q ss_pred CC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhh-hchHHH-HHHHHHHHHHHHHHHHHhC----CC
Q psy16848 334 IG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILS-SQEGVE-LRAKHQDIVAYLRNELIQI----GF 404 (514)
Q Consensus 334 ~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~-~~~~~~~~~~~l~~~L~~~----g~ 404 (514)
+| ||+++++++++.+....... +.+.+.+.+.++..+++... ..+..+ +++.++++++.+.+.|.+. ++
T Consensus 253 pGlRiG~~i~~~~l~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~ 330 (416)
T PRK09440 253 PGVRCGIVIADEEIIEALSNMNGII--SLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPC 330 (416)
T ss_pred CcceEEEEeCCHHHHHHHHHHHHHh--ccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCe
Confidence 68 99999999999888766544 33567788888888776321 112222 4666777778788877664 34
Q ss_pred ccccCC-CcEEEEEeCC-CccHHHHHHHHHHhCCeEEecccCCCCCC------CCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 405 PVEHTP-SHIIPIKIGN-PALNTKICDMLLKEKGHYVQPINYPTVPV------GEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 405 ~~~~~~-~~~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~------~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
.+..+. +.++++.++. ..+..++.+.+ .++||.+.|+..+.... ..+++|++++ .+++++++++++|++
T Consensus 331 ~~~~p~gg~fiw~~~~~~~~~~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~--~~~~~l~~~i~~l~~ 407 (416)
T PRK09440 331 LIHKPEGAIFLWLWFKDLPITTEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV--QDDEEIEKGIAILAE 407 (416)
T ss_pred EEecCCCceEEEEECCCCCCCHHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEec--CCHHHHHHHHHHHHH
Confidence 444555 5577888876 34567888888 48999999998653221 1358999998 378999999999999
Q ss_pred HHHHc
Q psy16848 477 VWKSL 481 (514)
Q Consensus 477 ~l~~~ 481 (514)
++++.
T Consensus 408 ~~~~~ 412 (416)
T PRK09440 408 EVEKA 412 (416)
T ss_pred HHHHH
Confidence 88764
No 238
>PLN02397 aspartate transaminase
Probab=99.92 E-value=3.7e-23 Score=213.64 Aligned_cols=215 Identities=13% Similarity=0.092 Sum_probs=150.2
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC---CCCCccccCCCc
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE---HGAGIGERDGQL 317 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~---~~~~~~~~~~~~ 317 (514)
|++.+++.+++. .++++++++++||||||.+++ +++|.++|++||+++|+||+|.....+. ...++..... .
T Consensus 180 d~~~l~~~l~~~-~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~-~ 257 (423)
T PLN02397 180 DFDGLLEDLKAA-PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVE-D 257 (423)
T ss_pred CHHHHHHHHHhC-CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHh-c
Confidence 556666666544 356889999999999999999 7888999999999999999999444332 1111111111 1
Q ss_pred cCceEEEcCCcccccCCC---eEEE--e-cHHHHHH----HHhhcCceEeccCCcHHHHHHHHHHHHHh--hh---chHH
Q psy16848 318 HNMDIISGTLGKAFGNIG---GYIV--G-TKNFIDT----IRSYAAGFIFTTSLPPTVLAGAREAIRIL--SS---QEGV 382 (514)
Q Consensus 318 ~~~di~~~S~sK~lg~~G---G~l~--~-~~~~~~~----l~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~---~~~~ 382 (514)
.+..++++||||.++.+| ||++ . ++++++. +....... ..+.+...+.++..+|+.. .+ +.++
T Consensus 258 ~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~ 335 (423)
T PLN02397 258 GHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPM--YSNPPIHGASIVATILGDPELFSEWTKELK 335 (423)
T ss_pred CCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcc--cCCCcHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 235799999999999878 9984 3 5555443 33322222 2245666677766666421 11 2256
Q ss_pred HHHHHHHHHHHHHHHHHHhCC----CccccCCCcE-EEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEE
Q psy16848 383 ELRAKHQDIVAYLRNELIQIG----FPVEHTPSHI-IPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLA 457 (514)
Q Consensus 383 ~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~-~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~ 457 (514)
++++.++++++.+.+.|++++ +.+..+++++ +++.++ .+++++|+++.||.+. + .+ |++
T Consensus 336 ~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~-----~~~~~~Ll~~~~V~v~-------~--~~--Ri~ 399 (423)
T PLN02397 336 GMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLN-----KEQVDRMTKEYHIYMT-------R--DG--RIS 399 (423)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCC-----HHHHHHHHHhCCEEEC-------C--CC--eEE
Confidence 788899999999999999986 6655666664 444442 4689999888899985 1 12 999
Q ss_pred eCCCCCHHHHHHHHHHHHHHHH
Q psy16848 458 PTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 458 ~~~~~t~e~id~~~~~l~~~l~ 479 (514)
++ ..+.+++++++++|+++++
T Consensus 400 ~~-~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 400 MA-GLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred Ee-eCCHHHHHHHHHHHHHHHh
Confidence 96 4789999999999999975
No 239
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.92 E-value=6.8e-23 Score=213.34 Aligned_cols=347 Identities=16% Similarity=0.133 Sum_probs=228.8
Q ss_pred eeeecccCCCCCChhHHHHHHHHHH-HhCCCCCCcCcccCc--chHHH-HHHHHHHhHcCCCcE-E-EE---eccccccc
Q psy16848 19 VTCRLSSVQYKVPKGGRKCLGEALE-KFGTGAGGTRNISGN--SLFHE-KLEEDVAKLHQKEAG-L-VF---TSCYVAND 89 (514)
Q Consensus 19 ~~~d~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~--~~~~~-~~~~~la~~~~~~~~-i-~~---~sGt~a~~ 89 (514)
..+++....-.-.|.+++++...+. +|+.+++++++..|. .+..+ ..++++++++|.+.. + +. +||+++|.
T Consensus 35 ~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~ 114 (452)
T PTZ00094 35 EGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANF 114 (452)
T ss_pred cCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHH
Confidence 4555533333346889999999885 676566666666664 22223 255689999987532 2 33 57999999
Q ss_pred cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 90 STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
.++.++.+ +||+|++++..|.+.+..........+.. ...
T Consensus 115 ~v~~al~~--~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~--------------------~~~------------------ 154 (452)
T PTZ00094 115 AVYTALLQ--PHDRIMGLDLPSGGHLTHGFYTAKKKVSA--------------------TSI------------------ 154 (452)
T ss_pred HHHHHhcC--CCCEEEecccccCCccccccccccccccc--------------------cee------------------
Confidence 99999866 99999999999988764332110000000 000
Q ss_pred hhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec-----CCC
Q psy16848 170 CEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR-----HND 244 (514)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~-----~~d 244 (514)
+.++..++ ..|
T Consensus 155 ----------------------------------------------------------------~~~~~~~~~~~~g~id 170 (452)
T PTZ00094 155 ----------------------------------------------------------------YFESLPYQVNEKGLID 170 (452)
T ss_pred ----------------------------------------------------------------eeeeeecccCCCCCcC
Confidence 00011111 126
Q ss_pred hhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEE
Q psy16848 245 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIIS 324 (514)
Q Consensus 245 ~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~ 324 (514)
++.+++.+++. +++++++. ++.+|...|+++|.++|+++|+++++|++|++|..+.... +. . ..++|+++
T Consensus 171 ~~~L~~~l~~~---~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~---~~-~-~~~~D~l~ 240 (452)
T PTZ00094 171 YDKLEELAKAF---RPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVL---PS-P-FPYADVVT 240 (452)
T ss_pred HHHHHHHHHHh---CCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCC---CC-C-CCCCcEEE
Confidence 77777777543 24566553 3468999999999999999999999999999888743221 11 1 12689999
Q ss_pred cCCcccc-cCCCeEEEecHHHHHHHHhhcCceE---eccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy16848 325 GTLGKAF-GNIGGYIVGTKNFIDTIRSYAAGFI---FTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELI 400 (514)
Q Consensus 325 ~S~sK~l-g~~GG~l~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 400 (514)
+|+||++ |+.||+++.++++.+.+........ +..+.++...+++.++++.+.....+++++++.++.+++.+.|.
T Consensus 241 ~S~hK~l~GP~Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~ 320 (452)
T PTZ00094 241 TTTHKSLRGPRSGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALE 320 (452)
T ss_pred cCCccCCCCCCceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHH
Confidence 9999988 6777888777655443332211111 12255677788888889888666777889999999999999998
Q ss_pred hCCCccccC--CCcEEEEEeCC-CccHHHHHHHHHHhCCeEEe-cccCCCC-CCCCcEEEEEeCCCCC----HHHHHHHH
Q psy16848 401 QIGFPVEHT--PSHIIPIKIGN-PALNTKICDMLLKEKGHYVQ-PINYPTV-PVGEEKIRLAPTPFHT----REMIDKFV 471 (514)
Q Consensus 401 ~~g~~~~~~--~~~~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~-~~~~~~~-~~~~~~iRl~~~~~~t----~e~id~~~ 471 (514)
+.|+++..+ ..+...+.+.. +....++...| +++||.+. ++..+.. ....+.+|++++..+| ++|+++++
T Consensus 321 ~~g~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~ 399 (452)
T PTZ00094 321 KRGYDLVTGGTDNHLVLVDLRPFGITGSKMEKLL-DAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVA 399 (452)
T ss_pred hCCcEEecCCCCCceEeecCCcCCCCHHHHHHHH-HHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHH
Confidence 888776542 23444444442 23456677777 68899995 3322211 1124799999965554 99999999
Q ss_pred HHHHHHHHH
Q psy16848 472 TDLLAVWKS 480 (514)
Q Consensus 472 ~~l~~~l~~ 480 (514)
+.|+++++.
T Consensus 400 ~~l~~~~~~ 408 (452)
T PTZ00094 400 DFLDRAVKL 408 (452)
T ss_pred HHHHHHHHH
Confidence 999998875
No 240
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.92 E-value=5.7e-23 Score=211.54 Aligned_cols=335 Identities=14% Similarity=0.061 Sum_probs=211.8
Q ss_pred ceeeecccCCC---CCChhHHHHHHHHHHHhCC--CCCCcCcccCcchHHHHHHHHHHhHcC---CCcEEE---Eecccc
Q psy16848 18 RVTCRLSSVQY---KVPKGGRKCLGEALEKFGT--GAGGTRNISGNSLFHEKLEEDVAKLHQ---KEAGLV---FTSCYV 86 (514)
Q Consensus 18 ~~~~d~~~~~~---~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~i~---~~sGt~ 86 (514)
...+|+....+ ..++...+++.+++..... ....+....|..++.+++.+++.+..+ .+..+. +.+|++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~ 108 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTG 108 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcch
Confidence 46688876543 2333455666666543211 112233334555555555554433321 122344 334445
Q ss_pred ccccchh---hccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCc
Q psy16848 87 ANDSTLF---TLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAI 163 (514)
Q Consensus 87 a~~~~l~---~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 163 (514)
|...++. ++.. |||.|+++.++|......++..|++++.++..+.+
T Consensus 109 al~~~~~~l~~~~~--~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~----------------------------- 157 (404)
T PTZ00376 109 ALRLGFEFLKRFLP--AGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPK----------------------------- 157 (404)
T ss_pred HHHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCceeeccccCcc-----------------------------
Confidence 5544443 4444 99999999999999998888888888766531000
Q ss_pred cchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCC
Q psy16848 164 CPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHN 243 (514)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~ 243 (514)
+. ..
T Consensus 158 -------------------------------~~---------------------------------------------~~ 161 (404)
T PTZ00376 158 -------------------------------TK---------------------------------------------GL 161 (404)
T ss_pred -------------------------------cC---------------------------------------------Cc
Confidence 00 01
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC---CCCCccccCCCc
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE---HGAGIGERDGQL 317 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~---~~~~~~~~~~~~ 317 (514)
|++.+++.+++. +++++++++++||||||.+++ +++|.++|++|++++|+||+|.....+. ....+..... .
T Consensus 162 d~~~l~~~~~~~-~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-~ 239 (404)
T PTZ00376 162 DFDGMLEDLRTA-PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAE-R 239 (404)
T ss_pred CHHHHHHHHHhC-CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHh-c
Confidence 556666666543 234678899999999999999 7888999999999999999998433221 0101111111 1
Q ss_pred cCceEEEcCCcccccCCC---eEE---EecHHHHHHHH----hhcCceEeccCCcHHHHHHHHHHHHHhh--h---chHH
Q psy16848 318 HNMDIISGTLGKAFGNIG---GYI---VGTKNFIDTIR----SYAAGFIFTTSLPPTVLAGAREAIRILS--S---QEGV 382 (514)
Q Consensus 318 ~~~di~~~S~sK~lg~~G---G~l---~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~---~~~~ 382 (514)
.+..++++||||.++.+| ||+ ++++++++.+. ...... ..+.+...+.++..+++... + ....
T Consensus 240 ~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 317 (404)
T PTZ00376 240 GVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPM--YSSPPIHGARIADRILSDPELRAEWLSELK 317 (404)
T ss_pred CCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhh--cCCCchHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 236799999999999768 998 56777655443 222111 12346677777777775211 1 2245
Q ss_pred HHHHHHHHHHHHHHHHHHhCCC----ccccCCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEE
Q psy16848 383 ELRAKHQDIVAYLRNELIQIGF----PVEHTPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLA 457 (514)
Q Consensus 383 ~~~~~~~~~~~~l~~~L~~~g~----~~~~~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~ 457 (514)
+.+++++++++.+.+.|++.++ .+..+.++ ++++.+ ..+++++|+++.||.+.|+ . |++
T Consensus 318 ~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~-----~~~~~~~L~~~~~v~v~p~----------~-Ris 381 (404)
T PTZ00376 318 EMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGL-----TKEQVERLIEKYHIYLLDN----------G-RIS 381 (404)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCC-----CHHHHHHHHHhCCEeecCC----------C-eEE
Confidence 5677889999999999998753 33445555 444544 2578889986669998754 1 999
Q ss_pred eCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 458 PTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 458 ~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
++. .+.++++.++++|+++++.
T Consensus 382 ~~~-~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 382 VAG-LTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred Eec-cCHHhHHHHHHHHHHHHhc
Confidence 963 7899999999999998754
No 241
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.92 E-value=8.6e-23 Score=212.14 Aligned_cols=226 Identities=14% Similarity=0.075 Sum_probs=155.0
Q ss_pred hhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHH--cCCEEEEeccccccccCCCCCCccccCCCccC
Q psy16848 245 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQ--HGALTFVDEVHAVGLYGEHGAGIGERDGQLHN 319 (514)
Q Consensus 245 ~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~--~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~ 319 (514)
+....+.+++..++++|++++++|+||||.+++ +++|+++|++ +++++|+||+|..... ...++... ..+
T Consensus 227 f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~s~~~~---~~~ 301 (527)
T PRK09275 227 WQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD--DFRSLFAV---LPY 301 (527)
T ss_pred CCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc--cccCHHHh---CCC
Confidence 444445555666778999999999999999999 7888999965 4999999999984321 11122111 235
Q ss_pred ceEEEcCCcccccCCC---eEEEecHH-----HHHHH--------------------------------HhhcCceEecc
Q psy16848 320 MDIISGTLGKAFGNIG---GYIVGTKN-----FIDTI--------------------------------RSYAAGFIFTT 359 (514)
Q Consensus 320 ~di~~~S~sK~lg~~G---G~l~~~~~-----~~~~l--------------------------------~~~~~~~~~~~ 359 (514)
..+++.||||.++.+| ||++++++ +++.+ +...... +.
T Consensus 302 ~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~--t~ 379 (527)
T PRK09275 302 NTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNH--TA 379 (527)
T ss_pred CEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhh--cc
Confidence 7899999999999888 99998876 33322 1222222 33
Q ss_pred CCcHHHHHH-H----HHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCCcE-EEEEeCC-------------
Q psy16848 360 SLPPTVLAG-A----REAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPSHI-IPIKIGN------------- 420 (514)
Q Consensus 360 ~~~~~~~~a-~----~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~i~l~~------------- 420 (514)
+.+.+.+.+ + .+.++. .+...+++++.++++++.+.+.|. .++....+.+.+ +++.++.
T Consensus 380 ~~s~p~Q~a~al~~~~all~~-~~~~~~~~~~~~~~Rr~~l~~~Lg-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~ 457 (527)
T PRK09275 380 GLSTPQQVQMALFSLFALLDE-EDAYKKAMKDIIRRRYKALYEGLG-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADY 457 (527)
T ss_pred CCCCHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhh
Confidence 455555543 2 233432 234567788888999888877772 123223455554 3344432
Q ss_pred ---CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 421 ---PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 421 ---~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
..+..+++.+|+++.||.+.||..+.. .+.++|++++ ..+++++.++.++|+++++++.
T Consensus 458 l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~--~~~~vRis~a-~~~~~~~~~~~~rl~~~l~~y~ 519 (527)
T PRK09275 458 LKKNYSPVDLLFRLAEETGVVLLPGGGFGG--PEWSVRVSLA-NLNEEDYAKIGKAIRKLLDEYY 519 (527)
T ss_pred hhccCCHHHHHHHHHhcCCEEEeCchhhCC--CCCeEEEEEe-cCCHHHHHHHHHHHHHHHHHHH
Confidence 124678889998889999999997653 2578999997 4578999999999999988764
No 242
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.92 E-value=8.2e-23 Score=210.97 Aligned_cols=344 Identities=15% Similarity=0.131 Sum_probs=214.7
Q ss_pred ChhHH--HHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHc---CCCcEEEEeccccccccchhhcccc-------
Q psy16848 31 PKGGR--KCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLH---QKEAGLVFTSCYVANDSTLFTLGKM------- 98 (514)
Q Consensus 31 ~~~~~--~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~---~~~~~i~~~sGt~a~~~~l~~l~~~------- 98 (514)
||+|. +++.+++++......... .-..+...++.++++++. +.++++|++||++|++.|++.....
T Consensus 56 ~p~v~~~~ai~~q~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~ 133 (431)
T TIGR03251 56 HPALVDDLAFRARLGAAAVNKPSNS--DVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQA 133 (431)
T ss_pred ChhhhHHHHHHHHHHHhhhcccccC--CCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhh
Confidence 79999 999999987432111111 112355667777777774 3467899999999999999865421
Q ss_pred -C-----CCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhh
Q psy16848 99 -I-----PGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEV 172 (514)
Q Consensus 99 -~-----~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (514)
+ +...|.....+|..+..++..++.....-.. .|.. .+. +.+.+..+.
T Consensus 134 ~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~----------------~~~~---~~~-~~~~p~~~~------ 187 (431)
T TIGR03251 134 RGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTAR----------------FPKF---DWP-RIDNPKLTF------ 187 (431)
T ss_pred cCCCCCCCceEEEECCccCCcchhhhhccCCccccccC----------------CCCC---CCc-cCCCCcccC------
Confidence 1 1245667778888888777766642110000 0000 000 000000000
Q ss_pred hhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHH
Q psy16848 173 SHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVL 252 (514)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l 252 (514)
.++. .. ...+.....++++.+++.+
T Consensus 188 --~~~~-----------------~~------------------------------------~~~~~~~~~~~l~~~~~~~ 212 (431)
T TIGR03251 188 --PLDA-----------------PN------------------------------------LDQVIALEEEALRQARAAF 212 (431)
T ss_pred --Cccc-----------------cc------------------------------------cchhhHHHHHHHHHHHHHH
Confidence 0000 00 0000001122445556666
Q ss_pred hhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCceEEEcCC
Q psy16848 253 ENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMDIISGTL 327 (514)
Q Consensus 253 ~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~di~~~S~ 327 (514)
... .+++++++++++++..|...+ +++|+++|++||+++|+||+++ +|..|..+ ..+..++ .+|++ ++
T Consensus 213 ~~~-~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~--a~~~~gv--~PDi~--~~ 285 (431)
T TIGR03251 213 AER-PHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAW--AYQQLGV--QPDIV--AF 285 (431)
T ss_pred HhC-CCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHH--HHHhcCC--CCCEE--Ee
Confidence 543 457999999999999998865 8999999999999999999999 55543211 1234444 79999 78
Q ss_pred cccccCCCeEEEecH--HHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--C
Q psy16848 328 GKAFGNIGGYIVGTK--NFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI--G 403 (514)
Q Consensus 328 sK~lg~~GG~l~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g 403 (514)
+|.+.. +|++..++ ++.............+++.+++.++++.++|+.+.++. ..++++++.+++.+.|+++ .
T Consensus 286 gK~~~~-~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~ 361 (431)
T TIGR03251 286 GKKTQV-CGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEER---LVDNARVQGAHLLARLHELAAE 361 (431)
T ss_pred cccCcc-ceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHh
Confidence 998733 56665543 22221111111122244788999999999999886655 5566677777777666553 2
Q ss_pred Cc-c---ccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 404 FP-V---EHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 404 ~~-~---~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
.+ + +...|.++.+++++......+.+.|+ ++||.+.+. +.+.+|++++..+|++|++++++++++
T Consensus 362 ~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~-~~Gvl~~~~-------g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 362 FPHLVSNPRGRGLMCAFDLPSTADRDEVIRQLY-REGVLLLGC-------GERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred CccceecccccceeEEEEeCCHHHHHHHHHHHH-hCCeEEecC-------CCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 22 2 23456788888876544567888996 999998642 235799999999999999999999876
No 243
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.91 E-value=6.8e-23 Score=195.90 Aligned_cols=327 Identities=17% Similarity=0.154 Sum_probs=223.0
Q ss_pred eeecccCCCCC-ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhcccc
Q psy16848 20 TCRLSSVQYKV-PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKM 98 (514)
Q Consensus 20 ~~d~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~ 98 (514)
++||.|..+-+ +|++.+++.++-.. ....||.++...++++++++++|.+.++|++|||+||+.+|.+.++
T Consensus 1 ~~~f~SDn~~g~~~~m~eam~~a~~~-------~~~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~- 72 (342)
T COG2008 1 MIDFRSDNVAGPTPEMREALAAANAV-------GDDVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQ- 72 (342)
T ss_pred CCccccCccCCCCHHHHHHHHhcccc-------CCCCCCCCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcC-
Confidence 36787777765 89999888875532 2345788999999999999999998899999999999999999987
Q ss_pred CCCceEEecCccchhhhhhh--hcCC--CCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhh
Q psy16848 99 IPGLHYISDAGNHASMIQGI--RNSS--APKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSH 174 (514)
Q Consensus 99 ~~gd~v~~~~~~h~~~~~~~--~~~~--~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (514)
||+.|++.+..|....++- ...+ .+....+..
T Consensus 73 -~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~------------------------------------------- 108 (342)
T COG2008 73 -PGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGA------------------------------------------- 108 (342)
T ss_pred -CCCeEEEeccccceecccCcHHHHcCCceeccCCCC-------------------------------------------
Confidence 9999999999998876532 1111 111111100
Q ss_pred hcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhh
Q psy16848 175 QHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLEN 254 (514)
Q Consensus 175 ~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~ 254 (514)
.| .-+.+.++..++.
T Consensus 109 ---------------------~G--------------------------------------------klt~e~v~~~i~~ 123 (342)
T COG2008 109 ---------------------DG--------------------------------------------KLTPEDVEAAIRP 123 (342)
T ss_pred ---------------------CC--------------------------------------------CcCHHHHHHhhcC
Confidence 00 0123334443332
Q ss_pred c--cCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcc
Q psy16848 255 M--DVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGK 329 (514)
Q Consensus 255 ~--~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK 329 (514)
. ....+.+++.++.+|..|+++| +++|.++|+++|+.|++|.+.-+...-..+. +...+....|+++++++|
T Consensus 124 ~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~---~~~~~~~~~D~v~~~~tK 200 (342)
T COG2008 124 DDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGV---ALKTIKSYVDSVSFCLTK 200 (342)
T ss_pred CCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCC---CHHHHHhhCCEEEEeccc
Confidence 1 1223566777777779999999 6888999999999999999987443321221 112223478999999999
Q ss_pred cccCCC-eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc
Q psy16848 330 AFGNIG-GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE 407 (514)
Q Consensus 330 ~lg~~G-G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 407 (514)
.++.++ +++++++++++.+...++..+...+...+..++....|+. .-....-.+..+++.+|.+.|... |+++.
T Consensus 201 ~g~~~~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~---~~~~~~~~Han~mA~~La~~~~~~~G~~~~ 277 (342)
T COG2008 201 GGGAPVGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALED---DVWRLAADHANAMAARLAEGLEAKPGVKLA 277 (342)
T ss_pred CCcceeeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhhhcCCceec
Confidence 998766 6778899999988876665533334455555555555542 222233344455689999999955 88886
Q ss_pred c-CCCcEEEEEeCCCcc-HHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 408 H-TPSHIIPIKIGNPAL-NTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 408 ~-~~~~~~~i~l~~~~~-~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
. ++.+++.+.+++... .-.....+ ...|+.+.+.. ..+|+..+..++++++++++..+++++
T Consensus 278 ~~~~tN~vf~~l~~~~i~~l~~~~~~-~~~~~~~~~~~--------~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 278 FPVETNMVFVRLPESAIEALRLAGAL-FYRGVLIGAHG--------EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred cCCcccEEEEECChHHHHHHHhhchh-heeeeeccCCC--------ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 5 578888888875311 11222222 24444443211 379999999999999999999998764
No 244
>KOG1401|consensus
Probab=99.91 E-value=6.6e-23 Score=196.96 Aligned_cols=351 Identities=23% Similarity=0.202 Sum_probs=231.5
Q ss_pred cCCceeeecccCCCC---C--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHc---CCCcEEEEecccc
Q psy16848 15 KSNRVTCRLSSVQYK---V--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLH---QKEAGLVFTSCYV 86 (514)
Q Consensus 15 ~~g~~~~d~~~~~~~---~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~---~~~~~i~~~sGt~ 86 (514)
.+|.-||||.+.-+. + ||++.+++.+++.+++++..++ -+.+ ..++++.+.+.. ..++++|++|||+
T Consensus 53 ~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~----~t~e-av~l~~~l~~~~~~~~~~rvff~nsGTe 127 (433)
T KOG1401|consen 53 PDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGY----FTLE-AVELEEVLSAVLGKGSAERVFFCNSGTE 127 (433)
T ss_pred CCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCcc----ccHH-HHHHHHHHHhcccCCCccEEEEecCCcH
Confidence 477788888654333 2 7999999999999988765433 1223 567888888888 5778999999999
Q ss_pred ccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccch
Q psy16848 87 ANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPL 166 (514)
Q Consensus 87 a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (514)
||+.||....+- -..++...+.++|.|+|+||..
T Consensus 128 Ane~ALK~Ark~----------------------------------------~~~~~~~~~t~~Iaf~nsyHG~------ 161 (433)
T KOG1401|consen 128 ANETALKFARKF----------------------------------------TGKKHPEKKTKFIAFENSYHGR------ 161 (433)
T ss_pred HHHHHHHHHHHh----------------------------------------hcccCCccceeEEEEecCcCCc------
Confidence 999999765430 1122333445788888888622
Q ss_pred hHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChh
Q psy16848 167 KELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVN 246 (514)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~ 246 (514)
..|.+..++. + .|-..+...--.++...++|..
T Consensus 162 --------------------tlgals~~~~---------------------s------~y~~~~~p~~p~v~~~~ynd~t 194 (433)
T KOG1401|consen 162 --------------------TLGALSVTGN---------------------S------KYGLPFDPIAPDVVTAEYNDST 194 (433)
T ss_pred --------------------chhHHHhhcc---------------------c------ccCCCCCCCCCceeecccCCHH
Confidence 1111110000 0 0000000012245666688999
Q ss_pred HHHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCce
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMD 321 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~d 321 (514)
.+++.+..+..+ ++++++++.+...|..+. +..|+++|+++|+++|.||+++ +|++|..+ ..++.+. .||
T Consensus 195 ~l~k~~~~h~~~-IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~--a~e~~~~--~PD 269 (433)
T KOG1401|consen 195 ALEKLFESHKGE-IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGW--AQEYFGV--TPD 269 (433)
T ss_pred HHHHHHHhCCCc-eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHH--HHHHhCc--CCc
Confidence 999999987544 899999999999998877 8999999999999999999999 67766543 3445554 899
Q ss_pred EEEcCCcccccCCC---eEEEecHHHHHHHHhhcC---ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy16848 322 IISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAA---GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYL 395 (514)
Q Consensus 322 i~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 395 (514)
|. ++.|.+++ | |+.++++++.+.+..... +. +++.+++.|.++...++.+.+.. .++++.+..+.|
T Consensus 270 I~--t~aK~L~g-GlPigA~~v~~kV~~~i~~~~~l~hg~--Tf~gnpLacsa~~~~l~~l~~~e---~~k~vs~~~k~L 341 (433)
T KOG1401|consen 270 IT--TVAKPLGG-GLPIGATGVRDKVAEMISPGDHLYHGG--TFSGNPLACSAGIKVLDELKDPE---TLKNVSKIGKEL 341 (433)
T ss_pred ce--eehhhccC-CceeEEEeehHHHHhhcCCCCccccCc--ccCCChhhhhHHHHHHHHHcCHH---HHHHHHHHHHHH
Confidence 99 99999987 6 889999999999876655 33 55889999999999999886554 666677777777
Q ss_pred HHHHHhCCCc----ccc--CCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEe----CCCCCHH
Q psy16848 396 RNELIQIGFP----VEH--TPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAP----TPFHTRE 465 (514)
Q Consensus 396 ~~~L~~~g~~----~~~--~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~----~~~~t~e 465 (514)
++.|.+.... ... ..+.++.+.+..+ ..++.+... +.+.++.++.. ..-...+|+.+ +..+|+|
T Consensus 342 ~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p--~~~~~d~~~-~~~ll~~~~~~---~~~~~gv~i~P~~~l~~~~~~E 415 (433)
T KOG1401|consen 342 RKLLDEYLKKTPNSICGGVGRGLVIGFEFEGP--VYKFADAAR-EQGLLILTLGK---GLLEEGVRIAPIYLLTVEHTPE 415 (433)
T ss_pred HHHHHHHhccCCCceeeeeeeEEEEEEEEeec--hhhhhhhhh-hhhHHHHHHhc---ccccceEEEeccccccccCcHH
Confidence 7777665211 111 1222333333221 223333331 33333322211 00112344444 2345689
Q ss_pred HHHHHHHHHHHHHHHcC
Q psy16848 466 MIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 466 ~id~~~~~l~~~l~~~~ 482 (514)
.++++++++.+.+.++.
T Consensus 416 ~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 416 VIQRLLTILEKVLSALN 432 (433)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999888763
No 245
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.91 E-value=5.1e-23 Score=211.52 Aligned_cols=331 Identities=17% Similarity=0.103 Sum_probs=209.2
Q ss_pred eeeecccCCC-----CC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC---CCcEE--EEecc-c
Q psy16848 19 VTCRLSSVQY-----KV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ---KEAGL--VFTSC-Y 85 (514)
Q Consensus 19 ~~~d~~~~~~-----~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~i--~~~sG-t 85 (514)
..+|+..+.+ .. .+.+.+++.+.++.. ....+....|..++.+.+.+++.+..+ .++.+ ++|+| +
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~--~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~ 104 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETE--TTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGT 104 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccc--cCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCcc
Confidence 5688865532 11 246666666654431 111233344655666666655544432 12223 56665 4
Q ss_pred cccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccc
Q psy16848 86 VANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP 165 (514)
Q Consensus 86 ~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (514)
+|+..++..+....|||.|+++.++|......++..|++++.++..+.+
T Consensus 105 ~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~------------------------------- 153 (396)
T PRK09257 105 GALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAA------------------------------- 153 (396)
T ss_pred HHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccc-------------------------------
Confidence 5666666555323499999999999999998888888888766531000
Q ss_pred hhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCCh
Q psy16848 166 LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDV 245 (514)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~ 245 (514)
+.| -|.
T Consensus 154 -----------------------------~~~---------------------------------------------~d~ 159 (396)
T PRK09257 154 -----------------------------TKG---------------------------------------------LDF 159 (396)
T ss_pred -----------------------------cCc---------------------------------------------cCH
Confidence 000 145
Q ss_pred hHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccC-C-CCCCccccCCCccCc
Q psy16848 246 NHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYG-E-HGAGIGERDGQLHNM 320 (514)
Q Consensus 246 ~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g-~-~~~~~~~~~~~~~~~ 320 (514)
+.+++.+++. .+++++++++++|||||.+++ +++|.++|++|++++|+||+|.....+ . ...++..... ..+.
T Consensus 160 ~~l~~~~~~~-~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~-~~~~ 237 (396)
T PRK09257 160 DAMLADLSQA-PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAA-AGLE 237 (396)
T ss_pred HHHHHHHHhC-CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHh-cCCc
Confidence 5555555532 233578888999999999999 799999999999999999999843221 1 1111111111 1245
Q ss_pred eEEEcCCcccccCCC---eEEEe---cHHHH----HHHHhhcCceEeccCCcHHHHHHHHHHHHHh-----hhchHHHHH
Q psy16848 321 DIISGTLGKAFGNIG---GYIVG---TKNFI----DTIRSYAAGFIFTTSLPPTVLAGAREAIRIL-----SSQEGVELR 385 (514)
Q Consensus 321 di~~~S~sK~lg~~G---G~l~~---~~~~~----~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~~~~~~~~ 385 (514)
.++++||||.++++| ||+++ +++.+ ..+....... ....+...+.++...++.. ...++++.+
T Consensus 238 vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r 315 (396)
T PRK09257 238 LLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTN--YSNPPAHGAAIVATILNDPELRAEWEAELEEMR 315 (396)
T ss_pred EEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhh--cCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 799999999999878 99873 34433 3332222111 1134666666666666421 134567789
Q ss_pred HHHHHHHHHHHHHHHhCC----CccccCCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCC
Q psy16848 386 AKHQDIVAYLRNELIQIG----FPVEHTPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTP 460 (514)
Q Consensus 386 ~~~~~~~~~l~~~L~~~g----~~~~~~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~ 460 (514)
++++++++.+.+.|++.+ +.+..+.++ ++++.++ .+++..+++++||.+.| . .|++++
T Consensus 316 ~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~-----~~~~~~l~~~~~V~~~p-------~----~ri~~~- 378 (396)
T PRK09257 316 ERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLT-----PEQVDRLREEFGVYAVG-------S----GRINVA- 378 (396)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCC-----HHHHHHHHHcCCEEEcC-------C----CeEEEe-
Confidence 999999999999999874 444456555 4555553 24556666788999864 1 199996
Q ss_pred CCCHHHHHHHHHHHHHH
Q psy16848 461 FHTREMIDKFVTDLLAV 477 (514)
Q Consensus 461 ~~t~e~id~~~~~l~~~ 477 (514)
..+++++++++++|+++
T Consensus 379 ~~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 379 GLNESNIDYVAEAIAAV 395 (396)
T ss_pred eCCHHHHHHHHHHHHhh
Confidence 37899999999999875
No 246
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.91 E-value=8.6e-23 Score=207.36 Aligned_cols=286 Identities=20% Similarity=0.208 Sum_probs=199.5
Q ss_pred cchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHH
Q psy16848 58 NSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLT 137 (514)
Q Consensus 58 ~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~ 137 (514)
..+...++++++++++|.+++++++||++|+..++.++.+ +||+|+++.+.|.+....++
T Consensus 38 ~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~--~gd~Vl~~~~~y~~~~~~~~------------------ 97 (369)
T cd00614 38 GNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLK--AGDHVVASDDLYGGTYRLFE------------------ 97 (369)
T ss_pred CChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcC--CCCEEEECCCCcchHHHHHH------------------
Confidence 4678899999999999999999999999999999998876 99999999998877653221
Q ss_pred HHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccC
Q psy16848 138 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVN 217 (514)
Q Consensus 138 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~ 217 (514)
T Consensus 98 -------------------------------------------------------------------------------- 97 (369)
T cd00614 98 -------------------------------------------------------------------------------- 97 (369)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecc
Q psy16848 218 PEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEV 297 (514)
Q Consensus 218 ~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea 297 (514)
..+...|.++..++.++.+.+++.++ +++++|++++++||+|.+.|+++|.++|+++|+++|+|++
T Consensus 98 ----------~~~~~~g~~~~~v~~~d~~~l~~~i~----~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t 163 (369)
T cd00614 98 ----------RLLPKLGIEVTFVDPDDPEALEAAIK----PETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNT 163 (369)
T ss_pred ----------HHHhhcCeEEEEeCCCCHHHHHHhcC----CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECC
Confidence 11122345555666555555555553 3589999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEecH-HHHHHHHhhcCceEeccCCcHHHHHHHHHH
Q psy16848 298 HAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVGTK-NFIDTIRSYAAGFIFTTSLPPTVLAGAREA 372 (514)
Q Consensus 298 ~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~ 372 (514)
++.+... .....++|++++|++|.+++. ||++++++ ++++.++.....+ +..+++..++++...
T Consensus 164 ~~~~~~~---------~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~--g~~~~p~~a~~~l~~ 232 (369)
T cd00614 164 FATPYLQ---------RPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLAL--GTILSPFDAWLLLRG 232 (369)
T ss_pred CcchhcC---------ChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhh--CCCCCHHHHHHHHcC
Confidence 9855431 111337899999999999753 48998876 8888887655443 446777777666555
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHHhCC-Cccc------------------cCCCcEEEEEeC-CCccHHHHHHHHH
Q psy16848 373 IRILSSQEGVELRAKHQDIVAYLRNELIQIG-FPVE------------------HTPSHIIPIKIG-NPALNTKICDMLL 432 (514)
Q Consensus 373 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~------------------~~~~~~~~i~l~-~~~~~~~~~~~Ll 432 (514)
++ .+...+++..++.+++.+.|++.+ +..+ ...++++.+.+. +.....+|.+.|
T Consensus 233 l~-----tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l- 306 (369)
T cd00614 233 LK-----TLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNAL- 306 (369)
T ss_pred CC-----CHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcC-
Confidence 54 234467788889999999998873 3211 124668888886 333344455444
Q ss_pred HhCCeEEe----------ccc--CCCCC--------CCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 433 KEKGHYVQ----------PIN--YPTVP--------VGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 433 ~~~GI~v~----------~~~--~~~~~--------~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
+--.+..+ +.. .+..+ ..++.+|++++. |+.+.+++.|++.+
T Consensus 307 ~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 307 KLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred CcceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 12221111 111 00000 125789999995 56666676666554
No 247
>PLN02242 methionine gamma-lyase
Probab=99.91 E-value=9.9e-23 Score=208.78 Aligned_cols=293 Identities=14% Similarity=0.163 Sum_probs=197.6
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+..+++++++++++|.+.+++++||++|+..++.++.+ +||+|+++.+.|......+...
T Consensus 75 ~Pt~~~LE~~lA~l~g~~~~l~~~sG~~Ai~~al~al~~--~GD~Vl~~~~~Y~~~~~~~~~~----------------- 135 (418)
T PLN02242 75 NPTVLNLGRQMAALEGTEAAYCTASGMSAISSVLLQLCS--SGGHVVASNTLYGGTHALLAHF----------------- 135 (418)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhC--CCCEEEEcCCcHHHHHHHHHHh-----------------
Confidence 577899999999999999999999999999999988876 9999999999887665332110
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 136 -------------------------------------------------------------------------------- 135 (418)
T PLN02242 136 -------------------------------------------------------------------------------- 135 (418)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
.....|.++++++..|.+.+++.+.+ .++++|++++++||+|.+.++++|.++|+++|+++|+|++|
T Consensus 136 ----------~~~~~G~~~~~~d~~d~e~l~~~i~~---~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~ 202 (418)
T PLN02242 136 ----------LPRKCNITTTFVDITDLEAVKKAVVP---GKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTF 202 (418)
T ss_pred ----------hhhccCceEEEcCCCCHHHHHHhcCc---CCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCC
Confidence 00112444444544455555555432 14899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHHHHHHHhhcCc--eEeccCCcHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNFIDTIRSYAAG--FIFTTSLPPTVLAGAREA 372 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~a~~~~ 372 (514)
+.+... .. ..+.|++++|+||.+++.| |++++++++++.+...... ...+..+++..++.+.
T Consensus 203 ~~~~~~--------~~--~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~-- 270 (418)
T PLN02242 203 APMVLS--------PA--RLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELS-- 270 (418)
T ss_pred CccCCC--------HH--HcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHH--
Confidence 733221 11 2257999999999997643 8999999998888765432 1112233333333222
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCcccc--------------------CCCcEEEEEeCCCccHHHHHHHHH
Q psy16848 373 IRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEH--------------------TPSHIIPIKIGNPALNTKICDMLL 432 (514)
Q Consensus 373 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--------------------~~~~~~~i~l~~~~~~~~~~~~Ll 432 (514)
+. ...+..++++..++++++.+.|++.++.+.. ..++++.|.+.+......|++.+
T Consensus 271 ~~---l~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l- 346 (418)
T PLN02242 271 ER---LPHLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLMRYL- 346 (418)
T ss_pred cC---CCcHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHHHHh-
Confidence 22 2244557788899999999999988544431 12458888886544456677766
Q ss_pred HhC----CeEEecccCCCC--------------------CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 433 KEK----GHYVQPINYPTV--------------------PVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 433 ~~~----GI~v~~~~~~~~--------------------~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
+-- .+.++-|..... ...++.+|+|++... +.+.+++-|++.++.++
T Consensus 347 ~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~---~~~dli~dl~~al~~~~ 417 (418)
T PLN02242 347 QNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGYTG---TLEQRWSQFEKALSAMK 417 (418)
T ss_pred hcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecCCC---CHHHHHHHHHHHHHHhh
Confidence 222 222332221110 012468999999432 35666666666666543
No 248
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.91 E-value=2.5e-22 Score=208.41 Aligned_cols=223 Identities=14% Similarity=0.094 Sum_probs=152.9
Q ss_pred hhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHc--CCEEEEeccccccccCCCCCCccccCCCccC
Q psy16848 245 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQH--GALTFVDEVHAVGLYGEHGAGIGERDGQLHN 319 (514)
Q Consensus 245 ~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~--gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~ 319 (514)
+....+.+++..+++++++++++|+||||.+++ +++|.++|++| ++++|+||+|..... ...++... ..+
T Consensus 226 ~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~sl~~~---~~~ 300 (521)
T TIGR03801 226 WQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD--DFRSLFAE---LPY 300 (521)
T ss_pred CCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--cccchhhh---CCC
Confidence 334445555556678999999999999999999 78889999987 999999999984322 11122211 235
Q ss_pred ceEEEcCCcccccCCC---eEEEecHH-----HHH--------HH------------------------HhhcCceEecc
Q psy16848 320 MDIISGTLGKAFGNIG---GYIVGTKN-----FID--------TI------------------------RSYAAGFIFTT 359 (514)
Q Consensus 320 ~di~~~S~sK~lg~~G---G~l~~~~~-----~~~--------~l------------------------~~~~~~~~~~~ 359 (514)
..+++.||||.+|.+| ||++++++ +++ .+ +...... +.
T Consensus 301 ~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~--~~ 378 (521)
T TIGR03801 301 NTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNH--TA 378 (521)
T ss_pred CEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhc--cC
Confidence 7899999999999888 99998764 221 11 1111112 22
Q ss_pred CCcHHHHH--H---HHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCcc--ccCCCc-EEEEEeCCC----------
Q psy16848 360 SLPPTVLA--G---AREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPV--EHTPSH-IIPIKIGNP---------- 421 (514)
Q Consensus 360 ~~~~~~~~--a---~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~-~~~i~l~~~---------- 421 (514)
+.+.+.+. + +.+.++. .+...++.++.++++++.+.+.| |+.+ ..+.+. ++++.++.-
T Consensus 379 g~s~p~Q~q~al~a~~all~~-~~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~ 454 (521)
T TIGR03801 379 GLSTPQQVQMALFSLFALMDK-ENAYKAETKDICRRREKLLFRGL---GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFS 454 (521)
T ss_pred CCCcHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCCCeEEEEEeehHHHHHHhcchHHH
Confidence 33444333 2 3333332 23456778888888888888887 5443 335554 444555421
Q ss_pred ------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 422 ------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 422 ------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
.+..+++.+|+++.||.+.||..+..+ ..++|++++ ..++++++++.++|+++++++
T Consensus 455 ~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~--~~~vRisla-~l~~~~~~~~~~rl~~~~~~~ 517 (521)
T TIGR03801 455 SYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGP--EWSVRVSLA-NLNEYDYAEIGRAIRKILDEY 517 (521)
T ss_pred HHHhccCCHHHHHHHHHHhCCEEEeCchhcCCC--CCeEEEEec-CCCHHHHHHHHHHHHHHHHHH
Confidence 146788999988899999999976543 568999996 467899999999999998765
No 249
>PRK08637 hypothetical protein; Provisional
Probab=99.91 E-value=8e-22 Score=202.01 Aligned_cols=227 Identities=15% Similarity=0.099 Sum_probs=151.3
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHH-----cCCEEEEecccccccc-CCCCCCcc-cc
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQ-----HGALTFVDEVHAVGLY-GEHGAGIG-ER 313 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~-----~gv~li~Dea~~~g~~-g~~~~~~~-~~ 313 (514)
|++.+++.++....++.+++++++||||||.+++ +++|.++|++ |++++|+||+|....+ +....++. ..
T Consensus 131 d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~ 210 (388)
T PRK08637 131 DTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAAL 210 (388)
T ss_pred CHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHh
Confidence 4555556555322344667889999999999999 6777777765 8999999999984433 22111111 11
Q ss_pred CCCccCc--eEEEcCCcccccCCC---eEEEec------HHHHHHHHhhcC---ceEeccCCcHHHHHHHHHHHHHhh-h
Q psy16848 314 DGQLHNM--DIISGTLGKAFGNIG---GYIVGT------KNFIDTIRSYAA---GFIFTTSLPPTVLAGAREAIRILS-S 378 (514)
Q Consensus 314 ~~~~~~~--di~~~S~sK~lg~~G---G~l~~~------~~~~~~l~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~-~ 378 (514)
.+ ..+. .++++|+||.++.+| ||++.+ +++.+.+..... ... ..+.|.+.+.++.+.++... .
T Consensus 211 ~~-~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~ 288 (388)
T PRK08637 211 AN-LHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSN-ISNGPHPSQSAVLRALNSPEFD 288 (388)
T ss_pred hc-ccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcc-cCCCCcHHHHHHHHHhCCHHHH
Confidence 11 1123 345569999988878 999854 577777654211 110 12567788888888775211 1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhC----CCccccCCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcE
Q psy16848 379 QEGVELRAKHQDIVAYLRNELIQI----GFPVEHTPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEK 453 (514)
Q Consensus 379 ~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~ 453 (514)
.+..+.+..++++++.+.+.|++. ++.+..+.++ +++++++. .+..++++.|++++||.+.+. +.++
T Consensus 289 ~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~-~~~~~l~~~l~~~~gv~~~~~-------~~~~ 360 (388)
T PRK08637 289 KEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG-VDAEELRVHLLEKYGIGTIAL-------NETD 360 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh-HHHHHHHHHHhhhcceEEEec-------cCCc
Confidence 234455666788888888888765 4555565554 66677763 356789999865789988631 2568
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 454 IRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 454 iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+|++++. .+.+++++++++|.++++.+
T Consensus 361 iRi~~~~-~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 361 LRIAFSC-VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred eEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence 9999984 67899999999999998765
No 250
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.90 E-value=5.1e-22 Score=202.81 Aligned_cols=359 Identities=16% Similarity=0.156 Sum_probs=233.0
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccc
Q psy16848 32 KGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNH 111 (514)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h 111 (514)
..+.++..+++..-... |+...-..+|++.+++++|.+++++++||+.|+..++.++.+ |||.| ++.+.+
T Consensus 32 ~ams~~~~~a~~~gd~~-------Y~~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~--pGD~V-~~~~~f 101 (431)
T cd00617 32 GAMSDYQWAAMMLGDEA-------YAGSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLK--PGRTV-PSNMHF 101 (431)
T ss_pred HHHHHHHHHHHHhCCCc-------cCCCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCC--CCCEE-ccCCcc
Confidence 35555555665532122 222344679999999999999999999999999999988876 99987 567777
Q ss_pred hhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 112 ASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
......+..+|+.++.++...... +.
T Consensus 102 ~~~~~~i~~~Ga~pv~v~i~~~~~------------~~------------------------------------------ 127 (431)
T cd00617 102 DTTRGHIEANGAVPVDLVIDEAHD------------AQ------------------------------------------ 127 (431)
T ss_pred cchHHHHHhCCCEeEEEecccccc------------cc------------------------------------------
Confidence 777777788888777554310000 00
Q ss_pred ccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec-CCChhHHHHHHhhccCCCceEEEEecCCC
Q psy16848 192 GEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR-HNDVNHLTQVLENMDVKIPKLVAFETVHS 270 (514)
Q Consensus 192 ~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~l~~~~~~~~~~vv~~~~~n 270 (514)
...+.. .-|.+.+++.+.+...+++++|+++.++|
T Consensus 128 --------------------------------------------~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N 163 (431)
T cd00617 128 --------------------------------------------ELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNN 163 (431)
T ss_pred --------------------------------------------cccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcC
Confidence 000000 12667777777654445689999999999
Q ss_pred CC-ccccC---HHHHHHHHHHcCCEEEEecccccc-cc-------CCCCCCccccC-CCccCceEEEcCCcccccC-CCe
Q psy16848 271 MT-GAICP---LKELCEVSHQHGALTFVDEVHAVG-LY-------GEHGAGIGERD-GQLHNMDIISGTLGKAFGN-IGG 336 (514)
Q Consensus 271 pt-G~~~~---l~~l~~l~~~~gv~li~Dea~~~g-~~-------g~~~~~~~~~~-~~~~~~di~~~S~sK~lg~-~GG 336 (514)
|+ |.+++ +++|.++|++||++||+|+++..+ .. |..+.++.+.. ....-.|.+..|++|..+. .||
T Consensus 164 ~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG 243 (431)
T cd00617 164 TAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGG 243 (431)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccce
Confidence 97 89887 578899999999999999998743 11 11222221110 0012467888888886644 478
Q ss_pred EEEecH-HHHHHHHhhc---CceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCCc
Q psy16848 337 YIVGTK-NFIDTIRSYA---AGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPSH 412 (514)
Q Consensus 337 ~l~~~~-~~~~~l~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 412 (514)
++++++ ++++.++... .++....+++....+++..+|+...+ .+.+.+++ ++++++.+.|++.|+++..|.+.
T Consensus 244 ~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~-~~r~~l~~~L~~~G~~v~~P~Gg 320 (431)
T cd00617 244 FLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--EDYLRHRV-EQVRYLGDRLDEAGVPIVEPAGG 320 (431)
T ss_pred EEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc--HHHHHHHH-HHHHHHHHHHHHCCCCccCCCcc
Confidence 999876 6888887532 11111123455555555446654211 22233344 45589999999999998877654
Q ss_pred -EEEEEeCC--------CccHHHHHHHHHHhCCeEEec-ccC--CCCCC-------CCcEEEEEeCC-CCCHHHHHHHHH
Q psy16848 413 -IIPIKIGN--------PALNTKICDMLLKEKGHYVQP-INY--PTVPV-------GEEKIRLAPTP-FHTREMIDKFVT 472 (514)
Q Consensus 413 -~~~i~l~~--------~~~~~~~~~~Ll~~~GI~v~~-~~~--~~~~~-------~~~~iRl~~~~-~~t~e~id~~~~ 472 (514)
++++..+. ...+.+++.+|+++.||.+.. |.. ...+. ....+|++++. ..|.+++|.+++
T Consensus 321 h~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~ 400 (431)
T cd00617 321 HAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAA 400 (431)
T ss_pred eEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHH
Confidence 55555432 124788998888899999753 221 11111 13789999975 678999999999
Q ss_pred HHHHHHHHcCCccCCcchhhHhHHHHHHH
Q psy16848 473 DLLAVWKSLDLPLSGLTCAQVNILLFIIL 501 (514)
Q Consensus 473 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 501 (514)
++.+++++.....+...-.++|++++|.+
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~lr~f~~ 429 (431)
T cd00617 401 AVIALYERREDIRGLRIVYEPKLLRHFTA 429 (431)
T ss_pred HHHHHHhhHhhCCCeEEEecCccceeeec
Confidence 99999988654443334467777776544
No 251
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=2.3e-21 Score=191.36 Aligned_cols=311 Identities=18% Similarity=0.232 Sum_probs=223.4
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccc
Q psy16848 32 KGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNH 111 (514)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h 111 (514)
.+..+++.+.+.. |. ... .+...++|+.+++++|.++++.++|||.|+.++|+++. .+|||.|+++..++
T Consensus 15 ~~e~~~v~~vl~s-g~------i~~--G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~-ig~GDeVI~ps~Tf 84 (374)
T COG0399 15 EEELAAVQEVLKS-GW------LTG--GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALA-IGPGDEVIVPSFTF 84 (374)
T ss_pred hHHHHHHHHHHHc-CC------eec--ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcC-CCCCCEEEecCCch
Confidence 4556667777664 11 111 47889999999999999999999999999999999877 67999999999999
Q ss_pred hhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 112 ASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
.++..++-..|+++
T Consensus 85 vATan~i~~~Ga~P------------------------------------------------------------------ 98 (374)
T COG0399 85 VATANAVLLVGAKP------------------------------------------------------------------ 98 (374)
T ss_pred HHHHHHHHHcCCeE------------------------------------------------------------------
Confidence 99887665555554
Q ss_pred ccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec--CCChhHHHHHHhhccCCCceEEEEecCC
Q psy16848 192 GEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR--HNDVNHLTQVLENMDVKIPKLVAFETVH 269 (514)
Q Consensus 192 ~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~--~~d~~~l~~~l~~~~~~~~~~vv~~~~~ 269 (514)
++++ .+++..+.+.+++..+++||+|+..+..
T Consensus 99 ----------------------------------------------VFvDid~~T~nid~~~ie~aIt~~tKAIipVhl~ 132 (374)
T COG0399 99 ----------------------------------------------VFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHLA 132 (374)
T ss_pred ----------------------------------------------EEEecCCcccCCCHHHHHHHcccCCeEEEEehhc
Confidence 4444 3457777888888888889999988875
Q ss_pred CCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCc--ccccC-CCeEEEec-HHHH
Q psy16848 270 SMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLG--KAFGN-IGGYIVGT-KNFI 345 (514)
Q Consensus 270 nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~s--K~lg~-~GG~l~~~-~~~~ 345 (514)
|...++++|.++|++||++||+|.+|++|...+.. ..|- --|+.++||+ |.++. .||+++.+ +++.
T Consensus 133 ---G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk-----~vGt--~Gd~~~fSF~~~K~ittgEGGav~tnd~ela 202 (374)
T COG0399 133 ---GQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGK-----KVGS--FGDIGAFSFHATKNLTTGEGGAVVTNDEELA 202 (374)
T ss_pred ---cCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCc-----cccc--ccceEEEEecCCCCccccCceEEEeCCHHHH
Confidence 88999999999999999999999999988752211 1111 1256666775 88855 46887665 6777
Q ss_pred HHHHhhcCc--------------eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcc--cc
Q psy16848 346 DTIRSYAAG--------------FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPV--EH 408 (514)
Q Consensus 346 ~~l~~~~~~--------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~~ 408 (514)
+.++..+.. .+++..++.+.++.+...|+.++ ++.++.++..+++.+.|+++ ++.+ ..
T Consensus 203 ~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~-----~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~ 277 (374)
T COG0399 203 EKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLD-----EINERRREIAQIYAEALKGLPGITLPPEP 277 (374)
T ss_pred HHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhhcCCCccccCCC
Confidence 776543211 23455778888888888887653 46677777777888888876 3332 22
Q ss_pred CC--C--cEEEEEeCCC-ccHHHHHHHHHHhCCeE----EecccCC-------CC-----CC----CCcEEEEEeCCCCC
Q psy16848 409 TP--S--HIIPIKIGNP-ALNTKICDMLLKEKGHY----VQPINYP-------TV-----PV----GEEKIRLAPTPFHT 463 (514)
Q Consensus 409 ~~--~--~~~~i~l~~~-~~~~~~~~~Ll~~~GI~----v~~~~~~-------~~-----~~----~~~~iRl~~~~~~t 463 (514)
.. . .++.+.+++. ...+.+...| +++||. ..|.+.. .. +. ..+.+.+.+...++
T Consensus 278 ~~~~~~~~~~~i~~~~~~~~R~~l~~~L-~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~ 356 (374)
T COG0399 278 DGAVHAWHLYTILVDEEGISRDALMESL-KEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLS 356 (374)
T ss_pred CCceeeeeeeEEEecCCCCCHHHHHHHH-HhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCC
Confidence 22 1 1444555553 5677888888 588555 3442211 00 11 24788999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy16848 464 REMIDKFVTDLLAVWKS 480 (514)
Q Consensus 464 ~e~id~~~~~l~~~l~~ 480 (514)
++|++++++++++++..
T Consensus 357 ~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 357 EEDVDRVIEALKEVLGS 373 (374)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999998753
No 252
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=9.3e-22 Score=197.55 Aligned_cols=313 Identities=19% Similarity=0.150 Sum_probs=209.1
Q ss_pred CceeeecccCC-CCC-ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC-cEEEEecccc-ccccch
Q psy16848 17 NRVTCRLSSVQ-YKV-PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE-AGLVFTSCYV-ANDSTL 92 (514)
Q Consensus 17 g~~~~d~~~~~-~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~i~~~sGt~-a~~~~l 92 (514)
+...+|++.+. .++ +|.+.+++.+.+.... ...+ . .....++++.++++++.+ ..+++++|++ ++..++
T Consensus 17 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y----~-~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~ 89 (337)
T PRK03967 17 GNYRIWLDKNENPFDLPEELKEEIFEELKRVP--FNRY----P-HITSDPLREAIAEFYGLDAENIAVGNGSDELISYLV 89 (337)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHhhcCc--cccC----C-CCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHH
Confidence 44568886544 223 6788888888775421 1111 1 123467888888888743 3455666655 444443
Q ss_pred hhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhh
Q psy16848 93 FTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEV 172 (514)
Q Consensus 93 ~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (514)
..+ +||.|+++.+.|......++..|.+++.++..
T Consensus 90 ~~~----~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~----------------------------------------- 124 (337)
T PRK03967 90 KLF----EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK----------------------------------------- 124 (337)
T ss_pred HHh----CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC-----------------------------------------
Confidence 322 79999999999986655555556555543321
Q ss_pred hhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHH
Q psy16848 173 SHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVL 252 (514)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l 252 (514)
.++..+.+.+
T Consensus 125 ----------------------------------------------------------------------~~~~~d~~~l 134 (337)
T PRK03967 125 ----------------------------------------------------------------------EDFTIDGERI 134 (337)
T ss_pred ----------------------------------------------------------------------CCCCcCHHHH
Confidence 1111112222
Q ss_pred hhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc
Q psy16848 253 ENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG 332 (514)
Q Consensus 253 ~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg 332 (514)
++.. ++++++++++|+||||.+++.++|.++++ +++++|+||+|.... +. +...... ..+..++++||||.+|
T Consensus 135 ~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~-~~---~~~~~~~-~~~~vi~l~S~SK~~~ 207 (337)
T PRK03967 135 AEKA-KNASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFS-GK---SLIGLID-EYPNLILLRTFSKAFG 207 (337)
T ss_pred HHhc-cCCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhc-cc---chHHHHh-hCCCEEEEecchHhhc
Confidence 2221 45788889999999999999999999995 799999999998422 11 1111111 1245799999999999
Q ss_pred CCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccC
Q psy16848 333 NIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHT 409 (514)
Q Consensus 333 ~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 409 (514)
.+| ||+++++++++.+......+ +.+.+.+.++..+++.. +...+.++...+.++.+.+.|.+.. .++
T Consensus 208 l~GlRiG~iv~~~~~i~~~~~~~~~~----~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~---~~~ 278 (337)
T PRK03967 208 LAGIRAGYAIANEEIIDALYRIKPPF----SLNILTMKIVRLALDHY--DLIEERIDYIIKERERVRRELGEYA---YPS 278 (337)
T ss_pred chhhhheeeecCHHHHHHHHhhcCCC----CCCHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHhccCc---CCC
Confidence 768 99999999999888765443 55778888888777632 2444455566677777888887652 234
Q ss_pred CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 410 PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 410 ~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
.+.++++.++ +.+.|. ++||.++++.. ...+++|++++ +.++.++++++|+++.+.++
T Consensus 279 ~~~~~~~~~~-------~~~~l~-~~gi~v~~~~~----~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~~~~ 336 (337)
T PRK03967 279 DANFLLLKLD-------AYDYLL-ENGIVVRKLSG----RLEGHIRVTVG---KREENDEFIKALKEIKEGYG 336 (337)
T ss_pred CCcEEEEhHH-------HHHHHH-HCCEEEEeCCC----CCCCeEEEecC---CHHHHHHHHHHHHHHHHhcC
Confidence 5666666542 677885 88999986532 23569999998 78899999999998877653
No 253
>KOG1368|consensus
Probab=99.90 E-value=1.5e-22 Score=186.03 Aligned_cols=335 Identities=20% Similarity=0.234 Sum_probs=236.0
Q ss_pred eeeecccCCCCC-ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccc
Q psy16848 19 VTCRLSSVQYKV-PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGK 97 (514)
Q Consensus 19 ~~~d~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~ 97 (514)
+.+|+-|...-. ..++++++.++... --.||.++-..+||++.|+++|++.++|++|||++|+++++.-+
T Consensus 22 ~~vDLRSDTvT~PTdeMr~am~eA~vg--------DdVyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc- 92 (384)
T KOG1368|consen 22 RSVDLRSDTVTVPTDEMRRAMAEASVG--------DDVYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHC- 92 (384)
T ss_pred eccccccccccCChHHHHHHHhhcccC--------cccccCCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHh-
Confidence 456776554443 45777777775442 23456677789999999999999999999999999999999877
Q ss_pred cCCCceEEecCccchhhhhhh---hcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhh
Q psy16848 98 MIPGLHYISDAGNHASMIQGI---RNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSH 174 (514)
Q Consensus 98 ~~~gd~v~~~~~~h~~~~~~~---~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (514)
..+|..|++.+..|.-.++.. .+.|..+.++....
T Consensus 93 ~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~------------------------------------------ 130 (384)
T KOG1368|consen 93 HQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNEN------------------------------------------ 130 (384)
T ss_pred cCCCceEEeccchheeehhccChhhhccceeEeeeeCC------------------------------------------
Confidence 359999999999998887643 22344333332210
Q ss_pred hcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhh
Q psy16848 175 QHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLEN 254 (514)
Q Consensus 175 ~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~ 254 (514)
.| .-++++.+..+..
T Consensus 131 ---------------------dg--------------------------------------------tm~ledIe~~ir~ 145 (384)
T KOG1368|consen 131 ---------------------DG--------------------------------------------TMDLEDIEAAIRV 145 (384)
T ss_pred ---------------------CC--------------------------------------------eeeHHHHHHhhcC
Confidence 00 0023344444432
Q ss_pred cc----CCCceEEEEecCCCCCc-cccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcC
Q psy16848 255 MD----VKIPKLVAFETVHSMTG-AICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGT 326 (514)
Q Consensus 255 ~~----~~~~~~vv~~~~~nptG-~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S 326 (514)
.. .+.|++|++++-+|.+| .++| ++++.++|++||+.|+.|.+.-+..--..+.+...+ -..+|.+.-+
T Consensus 146 ~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i---~~~fDSVsiC 222 (384)
T KOG1368|consen 146 PKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKI---CSAFDSVSIC 222 (384)
T ss_pred CCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHH---HHhhhhhhhh
Confidence 21 24589999999888766 8899 588889999999999999998865432223222222 2246778779
Q ss_pred CcccccCC-CeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CC
Q psy16848 327 LGKAFGNI-GGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GF 404 (514)
Q Consensus 327 ~sK~lg~~-GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 404 (514)
+||++|.+ |.++++++++++..+.++...+.+...+...+++++-+|+.-. + ..+.-++++..+.+.+... ++
T Consensus 223 LSKglgAPVGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~~----~-~L~~dHk~A~~lAe~~~~~~~i 297 (384)
T KOG1368|consen 223 LSKGLGAPVGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDENV----P-LLRADHKRAKELAEYINTPEEI 297 (384)
T ss_pred hhccCCCCcccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhcch----H-HHHHHHHHHHHHHHHhccccce
Confidence 99999864 6888999999999887776665556778888888888887432 1 4445556666666666665 36
Q ss_pred cccc--CCCcEEEEEeCC-CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHH-HHHHHH
Q psy16848 405 PVEH--TPSHIIPIKIGN-PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDL-LAVWKS 480 (514)
Q Consensus 405 ~~~~--~~~~~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l-~~~l~~ 480 (514)
++.. .+.+++.+.+.. ..+.+++++.+ +++||.+.++.. ..+|+.++...|+++++.+...+ +.++..
T Consensus 298 ~v~v~a~etNiv~~~l~q~~~~~~~l~~~~-~k~gi~lm~~~s-------~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q 369 (384)
T KOG1368|consen 298 RVEVPAVETNIVNMVLCQARLTAEELCKFL-EKNGILLMGGAS-------RRIRIVLHHQVTDEDVEYVKSVLSKKFLKQ 369 (384)
T ss_pred eeecchhhcceeeeecccccCCHHHHHHHH-HHCCeEEeeccc-------cceEEEEEEecCHHHHHHHHHHHHHHHHhh
Confidence 5543 366777776653 35688999999 599999975432 35999999999999999999999 555555
Q ss_pred cCCcc
Q psy16848 481 LDLPL 485 (514)
Q Consensus 481 ~~~~~ 485 (514)
...++
T Consensus 370 ~~~~~ 374 (384)
T KOG1368|consen 370 LTFCF 374 (384)
T ss_pred cCccc
Confidence 54333
No 254
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.90 E-value=1.8e-22 Score=204.40 Aligned_cols=305 Identities=20% Similarity=0.237 Sum_probs=205.3
Q ss_pred CChhHHHHHHHHHHHhCCCCCCcCcccC--cchHHHHHHHHHHhHcCCC--cEEEEeccccccccchhhcccc--CCC-c
Q psy16848 30 VPKGGRKCLGEALEKFGTGAGGTRNISG--NSLFHEKLEEDVAKLHQKE--AGLVFTSCYVANDSTLFTLGKM--IPG-L 102 (514)
Q Consensus 30 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~la~~~~~~--~~i~~~sGt~a~~~~l~~l~~~--~~g-d 102 (514)
.++.+.+++.+.++.....++......+ ..+..+++++++++++|.+ ..++++|+|+++..++.++... .+| +
T Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~ 89 (353)
T TIGR03235 10 IDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKK 89 (353)
T ss_pred CCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCC
Confidence 3678999998888652212111111111 2356789999999999875 3454555577888888776531 255 8
Q ss_pred eEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEe
Q psy16848 103 HYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFV 182 (514)
Q Consensus 103 ~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (514)
+|+++..+|+++...++.
T Consensus 90 ~vi~~~~~~~s~~~~~~~-------------------------------------------------------------- 107 (353)
T TIGR03235 90 HIITSAIEHPAVLEPIRA-------------------------------------------------------------- 107 (353)
T ss_pred eeeEcccccHHHHHHHHH--------------------------------------------------------------
Confidence 899999999987644321
Q ss_pred eccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-----CChhHHHHHHhhccC
Q psy16848 183 DEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-----NDVNHLTQVLENMDV 257 (514)
Q Consensus 183 ~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~ 257 (514)
+...|.+++.++. .|.+.+++.+ +
T Consensus 108 -----------------------------------------------~~~~G~~v~~v~~~~~~~~d~~~l~~~l----~ 136 (353)
T TIGR03235 108 -----------------------------------------------LERNGFTVTYLPVDESGRIDVDELADAI----R 136 (353)
T ss_pred -----------------------------------------------HHhcCCEEEEEccCCCCcCCHHHHHHhC----C
Confidence 1112334444441 1334444443 4
Q ss_pred CCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-e
Q psy16848 258 KIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG-G 336 (514)
Q Consensus 258 ~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G-G 336 (514)
++++++++++++||+|.+.|+++|.++|+++|+++++|++++.|.. +......++|++++|++|++|+.| |
T Consensus 137 ~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~--------~~~~~~~~~D~~~~s~~K~~gp~g~g 208 (353)
T TIGR03235 137 PDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKI--------TVDLSADRIDLISCSGHKIYGPKGIG 208 (353)
T ss_pred CCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCc--------cccccccCCCEEEeehhhcCCCCceE
Confidence 5689999999999999999999999999999999999999997764 112113478999999999988877 8
Q ss_pred EEEecHHHHHH--HHhhcCc-----eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccC
Q psy16848 337 YIVGTKNFIDT--IRSYAAG-----FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHT 409 (514)
Q Consensus 337 ~l~~~~~~~~~--l~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 409 (514)
+++.+++.... +...... .....+.+.....++.++++.+. .+.++++++++++.+++.+.|++.|+++..+
T Consensus 209 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~ 287 (353)
T TIGR03235 209 ALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQTLGVKLNGD 287 (353)
T ss_pred EEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCeEEeCC
Confidence 98888764332 1111000 00122456677778888888764 5678889999999999999998888876533
Q ss_pred C----CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCC-CCcEEEEEeC
Q psy16848 410 P----SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPV-GEEKIRLAPT 459 (514)
Q Consensus 410 ~----~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~-~~~~iRl~~~ 459 (514)
. ..++.+.++. .+..++.+.| ++ +|.++++..|.... +...+|.+++
T Consensus 288 ~~~~~~~i~~~~~~~-~~~~~v~~~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g 339 (353)
T TIGR03235 288 PAETIPHILNFSIDG-VNSEALIVNL-RA-DAAVSTGSACSSSKYEPSHVLQAMG 339 (353)
T ss_pred cccccCCEEEEEeCC-cCHHHHHHHH-hC-CeEEEchhhcCCCCCCCCHHHHHcC
Confidence 2 2366666653 4567788888 35 89999998765432 2335566665
No 255
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.90 E-value=7e-22 Score=202.23 Aligned_cols=288 Identities=17% Similarity=0.199 Sum_probs=197.8
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...+|+++++++.|.+++++++||+.|+..++.++.+ +||+|+++.+.|.+.....
T Consensus 63 ~p~~~~Le~~iA~~~g~~~~l~~~sG~~Ai~~al~~ll~--~Gd~Vl~~~~~y~~~~~~~-------------------- 120 (400)
T PRK06234 63 NPTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSALK--AGDHVVASDTLYGCTFALL-------------------- 120 (400)
T ss_pred CccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhC--CCCEEEEecCccchHHHHH--------------------
Confidence 355789999999999999999999999998888887766 9999999999887765221
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 121 -------------------------------------------------------------------------------- 120 (400)
T PRK06234 121 -------------------------------------------------------------------------------- 120 (400)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHc--CCEEEEec
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQH--GALTFVDE 296 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~--gv~li~De 296 (514)
...+...|+++++++..|.+.+++.+. +++++|++++|+||+|.+.++++|.++|+++ |+++|+|+
T Consensus 121 --------~~~~~~~G~~v~~vd~~d~e~l~~~i~----~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDe 188 (400)
T PRK06234 121 --------NHGLTRYGVEVTFVDTSNLEEVRNALK----ANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDN 188 (400)
T ss_pred --------HHHHhhCCeEEEEECCCCHHHHHHHhc----cCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEEC
Confidence 112233455666666556555555553 4589999999999999999999999999997 99999999
Q ss_pred cccccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHH
Q psy16848 297 VHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREA 372 (514)
Q Consensus 297 a~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~ 372 (514)
+|+.+..+. . ...+.|++++|++|.+++.| |++++++++++.++.......++..+++..++.+...
T Consensus 189 a~~~~~~~~-------~--l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~ 259 (400)
T PRK06234 189 TFCTPYIQR-------P--LQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRG 259 (400)
T ss_pred CCCchhcCC-------c--hhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 998654321 1 12368999999999997644 9999999888887643222222456778777777666
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcc------------------ccCCCcEEEEEeCCC-ccHHHHHHHHH
Q psy16848 373 IRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPV------------------EHTPSHIIPIKIGNP-ALNTKICDMLL 432 (514)
Q Consensus 373 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~------------------~~~~~~~~~i~l~~~-~~~~~~~~~Ll 432 (514)
++.+ +.++++..++..++.+.|++. .+.. ....++++.|.+... ....+|.+.|
T Consensus 260 l~tl-----~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l- 333 (400)
T PRK06234 260 MKTL-----QIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNV- 333 (400)
T ss_pred cCcH-----HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhC-
Confidence 6533 346666778888888888875 1110 011355888988643 3345666666
Q ss_pred HhCCeEEecccCCC------C--------------CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 433 KEKGHYVQPINYPT------V--------------PVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 433 ~~~GI~v~~~~~~~------~--------------~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
+-.++..+-|.... . ...++.+|+|++... .+.+++-|+++++
T Consensus 334 ~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~----~~dl~~dl~~al~ 396 (400)
T PRK06234 334 KLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLED----VDDIIADLKQALD 396 (400)
T ss_pred CcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCC----HHHHHHHHHHHHH
Confidence 34454443222110 0 012478999999654 4444444444443
No 256
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.90 E-value=9.1e-22 Score=217.49 Aligned_cols=359 Identities=14% Similarity=0.109 Sum_probs=231.2
Q ss_pred CceeeecccCCCCCChhHHHHHHHHHHHhCCCCCC-cCcccCcchHHHHHHHHHHhHcCCC--c-E-EEEeccccccccc
Q psy16848 17 NRVTCRLSSVQYKVPKGGRKCLGEALEKFGTGAGG-TRNISGNSLFHEKLEEDVAKLHQKE--A-G-LVFTSCYVANDST 91 (514)
Q Consensus 17 g~~~~d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~~~--~-~-i~~~sGt~a~~~~ 91 (514)
+..|.|.++........+.+++.+.+..+..+.++ +....-..+.+++.++++++++|.+ + . +|+.|+|+++..+
T Consensus 34 ~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlv 113 (805)
T PLN02724 34 GVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLV 113 (805)
T ss_pred CCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHH
Confidence 35677877766555456666666665543333322 1122223567899999999999963 2 3 4444566776666
Q ss_pred hhhccccCCCceEEecCccchhhhhhhhc---CCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhH
Q psy16848 92 LFTLGKMIPGLHYISDAGNHASMIQGIRN---SSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKE 168 (514)
Q Consensus 92 l~~l~~~~~gd~v~~~~~~h~~~~~~~~~---~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (514)
...+. ..+||+|+++..+|.+++...+. .|+++..++.+...
T Consensus 114 a~~l~-~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~---------------------------------- 158 (805)
T PLN02724 114 GETFP-WSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAA---------------------------------- 158 (805)
T ss_pred HHHCC-CCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhcc----------------------------------
Confidence 65553 45899999999999887632211 13332222110000
Q ss_pred HhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHH
Q psy16848 169 LCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHL 248 (514)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l 248 (514)
+.. ....|. + ..+.+.+
T Consensus 159 --------------------~~~-~~~~g~-----------------------------------------~-~~~~~~l 175 (805)
T PLN02724 159 --------------------NQP-TNSQGS-----------------------------------------V-VVKSRGL 175 (805)
T ss_pred --------------------ccc-cccccc-----------------------------------------c-ccchhhh
Confidence 000 000000 0 0000223
Q ss_pred HHHHh------hccCCCceEEEEecCCCCCccccCHHHHHHHHHHc--------CCEEEEeccccccccCCCCCCccccC
Q psy16848 249 TQVLE------NMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQH--------GALTFVDEVHAVGLYGEHGAGIGERD 314 (514)
Q Consensus 249 ~~~l~------~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~--------gv~li~Dea~~~g~~g~~~~~~~~~~ 314 (514)
++.++ ....+++++|.+++.+|.+|.+.|++.+.++++.. ++++++|.+++.|.. +.+
T Consensus 176 ~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~--------piD 247 (805)
T PLN02724 176 QRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTS--------PPD 247 (805)
T ss_pred hhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCC--------CCC
Confidence 33221 11235678999999999999999998775555532 358999999997764 222
Q ss_pred CCccCceEEEcCCccccc-CCC-eEEEecHHHHHHHHhhcCceE---------------------e-ccCCcHHHHHHHH
Q psy16848 315 GQLHNMDIISGTLGKAFG-NIG-GYIVGTKNFIDTIRSYAAGFI---------------------F-TTSLPPTVLAGAR 370 (514)
Q Consensus 315 ~~~~~~di~~~S~sK~lg-~~G-G~l~~~~~~~~~l~~~~~~~~---------------------~-~~~~~~~~~~a~~ 370 (514)
....++|++++|+||++| +.| |+++.++++++.+.+...+.+ | ..+.+....+++.
T Consensus 248 v~~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~ 327 (805)
T PLN02724 248 LSRYPADFVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALR 327 (805)
T ss_pred hhhcCCCEEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHH
Confidence 223489999999999998 667 999999888877664322110 0 1245667778888
Q ss_pred HHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCC-------CccccC---------CCcEEEEEeCCCc---cHHHHHHHH
Q psy16848 371 EAIRILSSQEGVELRAKHQDIVAYLRNELIQIG-------FPVEHT---------PSHIIPIKIGNPA---LNTKICDML 431 (514)
Q Consensus 371 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-------~~~~~~---------~~~~~~i~l~~~~---~~~~~~~~L 431 (514)
++++++.+.+++++.++.+++.+++.+.|+++. +.+..+ +++++.|.+.+.. .....+..|
T Consensus 328 aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l 407 (805)
T PLN02724 328 HGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKL 407 (805)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHH
Confidence 899988776888999999999999999998872 444432 3567777765321 112224455
Q ss_pred HHhCCeEEecccCCCCCC--------------------------------CCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 432 LKEKGHYVQPINYPTVPV--------------------------------GEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 432 l~~~GI~v~~~~~~~~~~--------------------------------~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
+.++||.++.|.+|.... ..+.+|+|++.++|.+||+++++.|++.+.
T Consensus 408 ~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 408 ASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred HHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 468899999998876320 137899999999999999999999999775
Q ss_pred Hc
Q psy16848 480 SL 481 (514)
Q Consensus 480 ~~ 481 (514)
.-
T Consensus 488 ~~ 489 (805)
T PLN02724 488 ST 489 (805)
T ss_pred cC
Confidence 43
No 257
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.90 E-value=2.3e-21 Score=196.28 Aligned_cols=290 Identities=17% Similarity=0.188 Sum_probs=202.3
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...++++.+++++|.+++++++|||+|+..++.++. ..+||.|+++.+.|.++..++...|.+++.++.+. +.
T Consensus 17 ~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~--- 91 (352)
T cd00616 17 GPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALG-IGPGDEVIVPSFTFVATANAILLLGATPVFVDIDP-DT--- 91 (352)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcC-CCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCC-Cc---
Confidence 46788999999999999999999999999999988873 23999999999999999887777777666543210 00
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 92 -------------------------------------------------------------------------------- 91 (352)
T cd00616 92 -------------------------------------------------------------------------------- 91 (352)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
...|.+.+++.+ +++++++++++ ++|...|+++|.++|+++|+++|+|++|
T Consensus 92 ----------------------~~~d~~~l~~~i----~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~ 142 (352)
T cd00616 92 ----------------------YNIDPELIEAAI----TPRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQ 142 (352)
T ss_pred ----------------------CCcCHHHHHHhc----CcCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCC
Confidence 001334444333 45678888764 6899999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCc--ccccC-CCeEEEec-HHHHHHHHhhcCc-------------eEeccCC
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLG--KAFGN-IGGYIVGT-KNFIDTIRSYAAG-------------FIFTTSL 361 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~s--K~lg~-~GG~l~~~-~~~~~~l~~~~~~-------------~~~~~~~ 361 (514)
++|.... + ...+ ...|+.++|++ |+++. .||+++.+ +++.+.++..... ..++..+
T Consensus 143 ~~g~~~~-~----~~~~--~~~d~~~~S~~~~K~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (352)
T cd00616 143 ALGATYK-G----RKVG--TFGDAGAFSFHPTKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRL 215 (352)
T ss_pred CCCCeEC-C----EEcc--cCcceeEEcCCCCCCCcccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCc
Confidence 9765411 1 0011 12466777876 99954 45777765 5777766543211 1122345
Q ss_pred cHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccCC------CcEEEEEeCC--CccHHHHHHHHH
Q psy16848 362 PPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHTP------SHIIPIKIGN--PALNTKICDMLL 432 (514)
Q Consensus 362 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~------~~~~~i~l~~--~~~~~~~~~~Ll 432 (514)
++..++.+...++. ++++.++.+++.+++.+.|.+. |+.+..+. ..++.+.+++ .....++.+.|.
T Consensus 216 ~~~~aa~~~~~l~~-----~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~ 290 (352)
T cd00616 216 SEIQAAIGLAQLEK-----LDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALK 290 (352)
T ss_pred CHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHH
Confidence 55555555554443 3457788889999999999986 77654322 2366677764 456889999994
Q ss_pred HhCCeEEecccCCCCCC--------------------CCcEEEEEeCCCCCHHHHHHHHHHHH
Q psy16848 433 KEKGHYVQPINYPTVPV--------------------GEEKIRLAPTPFHTREMIDKFVTDLL 475 (514)
Q Consensus 433 ~~~GI~v~~~~~~~~~~--------------------~~~~iRl~~~~~~t~e~id~~~~~l~ 475 (514)
++||.+.....+.... ..+.+|++++..+|++|+++++++|+
T Consensus 291 -~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 291 -EAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred -HCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 8999876443322111 12689999999999999999999874
No 258
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.90 E-value=7.7e-22 Score=201.24 Aligned_cols=243 Identities=16% Similarity=0.144 Sum_probs=172.8
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+..+++++++++++|.+++++++||++|+..++.++.+ +||+|+++.+.|.++...+
T Consensus 60 ~p~~~~le~~la~l~g~~~~v~~ssG~~Ai~~al~al~~--~Gd~Vi~~~~~y~~t~~~~-------------------- 117 (390)
T PRK08133 60 NPTVTMFQERLAALEGAEACVATASGMAAILAVVMALLQ--AGDHVVSSRSLFGSTVSLF-------------------- 117 (390)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC--CCCEEEEccCcchhHHHHH--------------------
Confidence 466889999999999999999999999999988888866 9999999998887765221
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 118 -------------------------------------------------------------------------------- 117 (390)
T PRK08133 118 -------------------------------------------------------------------------------- 117 (390)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
...+...|+++++++..|.+.+++.+ ++++++|++++|+||+|.+.++++|.++|+++|+++|+|+++
T Consensus 118 --------~~~~~~~G~~v~~vd~~d~~~l~~~i----~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~ 185 (390)
T PRK08133 118 --------EKIFARFGIETTFVDLTDLDAWRAAV----RPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCF 185 (390)
T ss_pred --------HHHHHHcCcEEEEECCCCHHHHHHhc----CcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCC
Confidence 11223345566666655555555554 356899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIR 374 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~ 374 (514)
+.+.... ....++|++++|+||++++.| |++++++++++.+....... +...++..+..+...++
T Consensus 186 ~~~~~~~---------pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~--g~~~~~~~a~~~l~gl~ 254 (390)
T PRK08133 186 CTPALQQ---------PLKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTA--GPTLSPFNAWVFLKGLE 254 (390)
T ss_pred cccccCC---------chhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHh--CCCCCHHHHHHHHcccc
Confidence 7443211 113367999999999998754 78888888777665433332 33456665555444443
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc------------------cCCCcEEEEEeCCC-ccHHHHHHHH
Q psy16848 375 ILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE------------------HTPSHIIPIKIGNP-ALNTKICDML 431 (514)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~------------------~~~~~~~~i~l~~~-~~~~~~~~~L 431 (514)
.+..+.++..++...+.+.|++. ++..+ ...++++.|.+.+. .....|.+.|
T Consensus 255 -----tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l 326 (390)
T PRK08133 255 -----TLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDAT 326 (390)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHHhC
Confidence 33446667777888888888876 32211 11355888988532 2234555554
No 259
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.90 E-value=7.3e-22 Score=199.33 Aligned_cols=282 Identities=18% Similarity=0.166 Sum_probs=198.4
Q ss_pred CcchHHHHHHHHHHhHcCCC----cEEEEeccccccccchhhccc------------cCCCceEEecCccchhhhhhhhc
Q psy16848 57 GNSLFHEKLEEDVAKLHQKE----AGLVFTSCYVANDSTLFTLGK------------MIPGLHYISDAGNHASMIQGIRN 120 (514)
Q Consensus 57 ~~~~~~~~~~~~la~~~~~~----~~i~~~sGt~a~~~~l~~l~~------------~~~gd~v~~~~~~h~~~~~~~~~ 120 (514)
+..++.+++.+++++++|.+ .++++++||+++..++.++.. .+++++|++++++|.+...+++.
T Consensus 35 ~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~ 114 (345)
T cd06450 35 AATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAY 114 (345)
T ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHH
Confidence 44677778888888888875 578889999999988887642 11245899999999999888777
Q ss_pred CCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceee
Q psy16848 121 SSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGE 200 (514)
Q Consensus 121 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~ 200 (514)
.|.+++.++.++. +
T Consensus 115 ~g~~~~~v~~~~~---------------------------------------------------------------~--- 128 (345)
T cd06450 115 LDVKVRLVPVDED---------------------------------------------------------------G--- 128 (345)
T ss_pred HhcCeEEeeeCCC---------------------------------------------------------------C---
Confidence 7777665542100 0
Q ss_pred ecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhc--cCCCceEEEEecCCCCCccccCH
Q psy16848 201 RDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENM--DVKIPKLVAFETVHSMTGAICPL 278 (514)
Q Consensus 201 ~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~--~~~~~~~vv~~~~~nptG~~~~l 278 (514)
..|.+.+++.+.+. ...+++++++++++|++|.+.++
T Consensus 129 -----------------------------------------~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~ 167 (345)
T cd06450 129 -----------------------------------------RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPL 167 (345)
T ss_pred -----------------------------------------CcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCH
Confidence 01445555555431 12246788999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeccccccccCC-CCCCccccCCCccCceEEEcCCcccccC-CC-eEEEecHHHHHHHHhhcCce
Q psy16848 279 KELCEVSHQHGALTFVDEVHAVGLYGE-HGAGIGERDGQLHNMDIISGTLGKAFGN-IG-GYIVGTKNFIDTIRSYAAGF 355 (514)
Q Consensus 279 ~~l~~l~~~~gv~li~Dea~~~g~~g~-~~~~~~~~~~~~~~~di~~~S~sK~lg~-~G-G~l~~~~~~~~~l~~~~~~~ 355 (514)
++|.++|+++|+++++|++|+.+.... ..... ... ..+.|.+++|+||++++ .| |+++.+
T Consensus 168 ~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~~~~d~~~~s~~K~l~~p~g~g~~~~~-------------- 230 (345)
T cd06450 168 EEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHL--DFG-IERVDSISVDPHKYGLVPLGCSAVLVR-------------- 230 (345)
T ss_pred HHHHHHHHHhCCeEEEechhhHHHhhChhhHHH--hcC-ccccCEEEEchhHhhCCCcchHHHHHH--------------
Confidence 999999999999999999999665311 11000 011 23679999999998754 34 655433
Q ss_pred EeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcccc-CCCcEEEEEeCC----CccHHHHHH
Q psy16848 356 IFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEH-TPSHIIPIKIGN----PALNTKICD 429 (514)
Q Consensus 356 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~i~l~~----~~~~~~~~~ 429 (514)
..+..++++.+...++++++++..++.+++.+.|++. ++.+.. +..+++.+.++. +....++.+
T Consensus 231 ----------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~ 300 (345)
T cd06450 231 ----------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSD 300 (345)
T ss_pred ----------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHHH
Confidence 3334445555555677889999999999999999987 666543 456788887765 245678888
Q ss_pred HHHHhCCeEEecccCCCCCCCCcEEEEEeCCCC-CHHHHHHHHHHHHH
Q psy16848 430 MLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFH-TREMIDKFVTDLLA 476 (514)
Q Consensus 430 ~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~-t~e~id~~~~~l~~ 476 (514)
.|. ++|+.+.+...+ ..+.++|++++..+ |++|++++++.|++
T Consensus 301 ~L~-~~g~~~~~~~~~---~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 301 RLN-ERGGWHVPATTL---GGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HHH-hcCCEEEEeeEE---CCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 885 776544433221 13568999999764 99999999999875
No 260
>KOG0634|consensus
Probab=99.90 E-value=4.1e-21 Score=185.60 Aligned_cols=291 Identities=16% Similarity=0.082 Sum_probs=212.7
Q ss_pred EEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCC----ChHHHHHHHHhcccCCCcEEEe
Q psy16848 78 GLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHN----DVNHLTQVLENMDVKIPKLVAF 153 (514)
Q Consensus 78 ~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~----d~~~l~~~l~~~~~~~~~~~~~ 153 (514)
.+++++.|++...+++.++. +||+|+++..+|.+.+++++..|..+++++.+ +++.|++.+.+-....-
T Consensus 127 iiit~G~t~~l~~~l~~~~N--~gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~----- 199 (472)
T KOG0634|consen 127 IIITNGNTDGLFKVLRTLIN--RGDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSY----- 199 (472)
T ss_pred EEEecCCchHHHHHHHHhhc--CCCceEEecccchHHHHhccccCceEEeccccCCCCCHHHHHHHHhcCCcccc-----
Confidence 34444456788999999977 99999999999999999999999888887653 56777776665432200
Q ss_pred eccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhC
Q psy16848 154 ETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNS 233 (514)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~ 233 (514)
T Consensus 200 -------------------------------------------------------------------------------- 199 (472)
T KOG0634|consen 200 -------------------------------------------------------------------------------- 199 (472)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCEEEecCCChhHHHHHHhhccCCCc-eEEEEecCCCCCccccCH---HHHHHHHHHcCCEEEEeccccccccCC----
Q psy16848 234 SAPKIIYRHNDVNHLTQVLENMDVKIP-KLVAFETVHSMTGAICPL---KELCEVSHQHGALTFVDEVHAVGLYGE---- 305 (514)
Q Consensus 234 g~~~~~v~~~d~~~l~~~l~~~~~~~~-~~vv~~~~~nptG~~~~l---~~l~~l~~~~gv~li~Dea~~~g~~g~---- 305 (514)
..+++ .++.+++.+||||..+++ ++|.++|++|++++|+||.|.+..+..
T Consensus 200 ----------------------k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~ 257 (472)
T KOG0634|consen 200 ----------------------KKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPS 257 (472)
T ss_pred ----------------------cCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCC
Confidence 01122 357789999999999994 899999999999999999999655431
Q ss_pred ---CC--CC---cc-----ccCCC-ccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHH
Q psy16848 306 ---HG--AG---IG-----ERDGQ-LHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAG 368 (514)
Q Consensus 306 ---~~--~~---~~-----~~~~~-~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a 368 (514)
.. .. +. ..... -.+.+|-..||||.+++ | ||+.+++-+++++-...... +.+.+...+..
T Consensus 258 ~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaP-GlRlG~it~~~~~l~ril~~ae~~--t~~pSg~sq~i 334 (472)
T KOG0634|consen 258 LELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAP-GLRLGWITGNSLFLKRILDLAEVA--TSGPSGFSQGI 334 (472)
T ss_pred ccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcC-cceeEEeecCHHHHHHHhhhccee--ecCcccccHHH
Confidence 00 00 00 00111 13677999999999998 7 99999998888876655443 33466777777
Q ss_pred HHHHHHHhhh----chHHHHHHHHHHHHHHHHHHHHhC---C-CccccCC-CcEEEEEeC-------CCcc-HHHHHHHH
Q psy16848 369 AREAIRILSS----QEGVELRAKHQDIVAYLRNELIQI---G-FPVEHTP-SHIIPIKIG-------NPAL-NTKICDML 431 (514)
Q Consensus 369 ~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~---g-~~~~~~~-~~~~~i~l~-------~~~~-~~~~~~~L 431 (514)
..+.|+.+.+ .++.+++..+..++..+..+|.+. . ..+.++. |.|+|++++ +..+ ..++...+
T Consensus 335 v~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~ 414 (472)
T KOG0634|consen 335 VYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIK 414 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHH
Confidence 7777777665 456788888889999999999886 3 4455554 447788886 3222 45555555
Q ss_pred HHhCCeEEecccCCCCCCC----CcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 432 LKEKGHYVQPINYPTVPVG----EEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 432 l~~~GI~v~~~~~~~~~~~----~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+.++||.+.+|.++..... +-++|++++ ....|++++.++++..++++.
T Consensus 415 ~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a-~a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 415 AVKNGVKLVCGSWFMVDPESSWSKIFFRLSIA-FAEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred HHHCCeEEecCceeEEcCccCCCcceEEEEee-cCCHHHHHHHHHHHHHHHHHH
Confidence 5799999999986554322 239999998 466889999999999988764
No 261
>PRK05968 hypothetical protein; Provisional
Probab=99.90 E-value=1.3e-21 Score=199.51 Aligned_cols=287 Identities=18% Similarity=0.148 Sum_probs=203.4
Q ss_pred cchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHH
Q psy16848 58 NSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLT 137 (514)
Q Consensus 58 ~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~ 137 (514)
..+..+++++++++++|.+++++++||+.|+..++.++.+ +||+|+++.+.|.++...+.
T Consensus 61 ~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~al~al~~--~Gd~Vl~~~~~y~~t~~~~~------------------ 120 (389)
T PRK05968 61 DNPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFVE--PGDRIVAVRHVYPDAFRLFE------------------ 120 (389)
T ss_pred CChhHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC--CCCEEEEeCCCchHHHHHHH------------------
Confidence 3466899999999999999999999999999888887765 99999999998887652211
Q ss_pred HHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccC
Q psy16848 138 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVN 217 (514)
Q Consensus 138 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~ 217 (514)
T Consensus 121 -------------------------------------------------------------------------------- 120 (389)
T PRK05968 121 -------------------------------------------------------------------------------- 120 (389)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecc
Q psy16848 218 PEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEV 297 (514)
Q Consensus 218 ~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea 297 (514)
..+...|.++++++..|.+.+++.+ +++++|++++|.|+++...++++|.++|+++|+++|+|++
T Consensus 121 ----------~~~~~~G~~v~~vd~~d~~~l~~~i-----~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a 185 (389)
T PRK05968 121 ----------TILKRMGVEVDYVDGRDEEAVAKAL-----PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNS 185 (389)
T ss_pred ----------HHHHHcCceEEEeCCCCHHHHHHhc-----ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECC
Confidence 1122345556666655555555554 2478999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 298 HAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 298 ~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
|+.+.... ....+.|+++.|++|.+++. ||+++.++++++.++.....+ .+..+++..++.+...|
T Consensus 186 ~a~~~~~~---------p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~-~g~~~~~~~A~~~l~~L 255 (389)
T PRK05968 186 WASPVFQR---------PITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPY-LGAKLSPFEAWLLLRGL 255 (389)
T ss_pred CcchhccC---------chhcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHh-CCCCCChHHHHHHHccc
Confidence 98554211 11236799999999999763 488888988888777543221 13356777777766666
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcccc-C------------CCcEEEEEeCCCccHHHHHHHHHHhCCeEE
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEH-T------------PSHIIPIKIGNPALNTKICDMLLKEKGHYV 439 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~------------~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v 439 (514)
+.+ ....++..++.+++.+.|++. ++..+. + .++++.+.+.+.....+|++.| +..++.+
T Consensus 256 ~tl-----~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L-~~~~~~~ 329 (389)
T PRK05968 256 RTL-----PLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADAL-KLFRLGV 329 (389)
T ss_pred CcH-----HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhC-CccEEec
Confidence 533 446677777788889999887 443221 1 2458888887555677888888 4777666
Q ss_pred ecccCCC------------C-C-------CCCcEEEEEeCCCCCHHHHHHHHHHHH
Q psy16848 440 QPINYPT------------V-P-------VGEEKIRLAPTPFHTREMIDKFVTDLL 475 (514)
Q Consensus 440 ~~~~~~~------------~-~-------~~~~~iRl~~~~~~t~e~id~~~~~l~ 475 (514)
+-|..+. . . ..++.+|+|++...+++-++.+-++|+
T Consensus 330 s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~ 385 (389)
T PRK05968 330 SWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALA 385 (389)
T ss_pred CCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 6444333 0 0 125799999997665544444444444
No 262
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.89 E-value=1.7e-21 Score=198.72 Aligned_cols=288 Identities=19% Similarity=0.188 Sum_probs=196.1
Q ss_pred hHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHH
Q psy16848 60 LFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQV 139 (514)
Q Consensus 60 ~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 139 (514)
+..+++++++++++|.+++++++||+.|+..++.++.+ +||+|+++.+.|......+.
T Consensus 59 p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~~l~al~~--~Gd~Vi~~~~~y~~t~~~~~-------------------- 116 (391)
T TIGR01328 59 PTVSNLEGRIAFLEGTEAAVATSSGMGAIAATLLTILK--AGDHLISDECLYGCTFALLE-------------------- 116 (391)
T ss_pred chHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC--CCCEEEEecCcchHHHHHHH--------------------
Confidence 56789999999999999999999999999888888865 99999999988876542211
Q ss_pred HHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCc
Q psy16848 140 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPE 219 (514)
Q Consensus 140 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~ 219 (514)
T Consensus 117 -------------------------------------------------------------------------------- 116 (391)
T TIGR01328 117 -------------------------------------------------------------------------------- 116 (391)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecccc
Q psy16848 220 VAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHA 299 (514)
Q Consensus 220 v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~ 299 (514)
..+...|+++++++..|.+.+++.+ ++++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+
T Consensus 117 --------~~~~~~G~~~~~vd~~d~e~l~~~i----~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a 184 (391)
T TIGR01328 117 --------HALTKFGIQVDFINMAIPEEVKAHI----KDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFA 184 (391)
T ss_pred --------HHHhcCCeEEEEECCCCHHHHHHhh----ccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCc
Confidence 1122345566666655555555554 3468999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHH
Q psy16848 300 VGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRI 375 (514)
Q Consensus 300 ~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~ 375 (514)
.+..+.+ ...+.|++++|++|.+++. ||++++++++++.++.......++..+++..++.+...|+.
T Consensus 185 ~~~~~~~---------~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~t 255 (391)
T TIGR01328 185 TPMLTNP---------VALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKT 255 (391)
T ss_pred hhccCCc---------hhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCc
Confidence 6543211 1336899999999999864 38888899988887753322212345677777666665543
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc------------------cCCCcEEEEEeCCC-ccHHHHHHHHHHhC
Q psy16848 376 LSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE------------------HTPSHIIPIKIGNP-ALNTKICDMLLKEK 435 (514)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~------------------~~~~~~~~i~l~~~-~~~~~~~~~Ll~~~ 435 (514)
+ ..++++..++.+++.+.|++. ++..+ ...++++.|.+... ....+|.+.| +--
T Consensus 256 l-----~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~~~l-~~~ 329 (391)
T TIGR01328 256 L-----NIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLLNNL-KLI 329 (391)
T ss_pred H-----HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHHHhC-Ccc
Confidence 3 346777788888888888876 22210 11355888988632 2234455544 211
Q ss_pred CeEEecccC------CCC------C--------CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 436 GHYVQPINY------PTV------P--------VGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 436 GI~v~~~~~------~~~------~--------~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
.+..+-|.. |.. + ..++.+|+|+++ ||.+.+++-|++.++.
T Consensus 330 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 330 RLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL----EDADDLIADLKQALDA 390 (391)
T ss_pred eEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHhh
Confidence 122211111 000 0 124689999995 4466666666666553
No 263
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.89 E-value=3.9e-21 Score=194.93 Aligned_cols=312 Identities=15% Similarity=0.173 Sum_probs=205.5
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccc
Q psy16848 32 KGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNH 111 (514)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h 111 (514)
++-.+++.+.+.. +. .++..+..+++++++++++|.+++++++|||+|+..++.++. .+|||+|+++.++|
T Consensus 11 ~~e~~a~~~~~~~-~~-------~~~~g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~-~~pGd~Viv~~~t~ 81 (376)
T TIGR02379 11 GQELEYIAEAISE-GK-------LSGDGPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLD-IQPGDEVIMPSYTF 81 (376)
T ss_pred HHHHHHHHHHHHc-CC-------ccCCcHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC-CCCcCEEEECCCCc
Confidence 3446677776664 11 123357789999999999999999999999999887777762 34999999999999
Q ss_pred hhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 112 ASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
.++..++...|++++.++.+
T Consensus 82 ~~~~~~~~~~G~~~v~vd~d------------------------------------------------------------ 101 (376)
T TIGR02379 82 VSTANAFVLRGAKIVFVDIR------------------------------------------------------------ 101 (376)
T ss_pred HHHHHHHHHcCCEEEEEecC------------------------------------------------------------
Confidence 99887776666665544321
Q ss_pred ccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCC
Q psy16848 192 GEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSM 271 (514)
Q Consensus 192 ~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~np 271 (514)
.+++..+.+.+++..++++++|+ ++|+
T Consensus 102 --------------------------------------------------~~~~~~d~~~le~~i~~~tk~Ii---p~~~ 128 (376)
T TIGR02379 102 --------------------------------------------------PDTMNIDETLIESAITHRTKAIV---PVHY 128 (376)
T ss_pred --------------------------------------------------CCcCCCCHHHHHHhcCcCceEEE---EeCC
Confidence 11122222334444455788886 4567
Q ss_pred CccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCc--ccccC--CCeEEEec-HHHHH
Q psy16848 272 TGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLG--KAFGN--IGGYIVGT-KNFID 346 (514)
Q Consensus 272 tG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~s--K~lg~--~GG~l~~~-~~~~~ 346 (514)
+|...++++|.++|++||+++|+|++|++|.. ..+... + .-.|+.++||+ |.+.+ .||+++.+ +++.+
T Consensus 129 ~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~-~~~~~~----g--~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~ 201 (376)
T TIGR02379 129 AGVACDMDTIMALANKHQLFVIEDAAQGVMST-YKGRAL----G--SIGHLGTFSFHETKNYTSGGEGGALLINDQAFIE 201 (376)
T ss_pred CCCccCHHHHHHHHHHCCCEEEEECccccCCc-cCCccc----C--CCCCEEEEeCCCCCcCcccCCceEEEECCHHHHH
Confidence 89999999999999999999999999997652 111111 1 11266666775 54533 56877665 77888
Q ss_pred HHHhhcCc-------------------eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC---C-
Q psy16848 347 TIRSYAAG-------------------FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI---G- 403 (514)
Q Consensus 347 ~l~~~~~~-------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g- 403 (514)
+++..+.. .+++..++.+.++.+...|+.++ +..++.++.+++..+.|.++ +
T Consensus 202 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~-----~~~~~r~~~~~~y~~~L~~~~~~~~ 276 (376)
T TIGR02379 202 RAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQAD-----RINQDRLATWQLYQDALKPLEEKGI 276 (376)
T ss_pred HHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHhccCCcCCe
Confidence 77654321 22344567777777777777653 34555555555566666543 1
Q ss_pred Ccc--ccCCC----cEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCC--C--------C---------CCcEEEEEe
Q psy16848 404 FPV--EHTPS----HIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTV--P--------V---------GEEKIRLAP 458 (514)
Q Consensus 404 ~~~--~~~~~----~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~--~--------~---------~~~~iRl~~ 458 (514)
+.. ..+.. .++.+.++...+.+++.+.| +++||.++....+.. + . ..+.+.+.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~i~~~~~~~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~ 355 (376)
T TIGR02379 277 IELPSIPNGCQHNAHMFYIKLKDEDDRNELIKYL-KEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPL 355 (376)
T ss_pred eeCCCCCCCCeeeeEEEEEEECCcCCHHHHHHHH-HHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccC
Confidence 111 11111 24556666544678999999 599999873321110 0 0 135788888
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q psy16848 459 TPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 459 ~~~~t~e~id~~~~~l~~~l 478 (514)
+..++++|++++++.+++++
T Consensus 356 ~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 356 YYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred CCCCCHHHHHHHHHHHHHHh
Confidence 88999999999999998864
No 264
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.89 E-value=1.2e-21 Score=199.73 Aligned_cols=285 Identities=17% Similarity=0.097 Sum_probs=197.9
Q ss_pred hHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHH
Q psy16848 60 LFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQV 139 (514)
Q Consensus 60 ~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 139 (514)
+...++++.+++++|.+++++++||+.|+..++.++.+ +||+|+++.+.|......++...
T Consensus 61 pt~~~Le~~lA~l~G~~~al~~~sG~~Ai~~~l~al~~--~Gd~Vv~~~~~y~~~~~~~~~~~----------------- 121 (386)
T PRK06767 61 PTVKLFEERMAVLEGGEEALAFGSGMAAISATLIGFLK--AGDHIICSNGLYGCTYGFLEVLE----------------- 121 (386)
T ss_pred cchHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC--CCCEEEEcCCcHHHHHHHHHHHH-----------------
Confidence 45789999999999999999999999998888888866 99999999998877664332211
Q ss_pred HHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCc
Q psy16848 140 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPE 219 (514)
Q Consensus 140 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~ 219 (514)
T Consensus 122 -------------------------------------------------------------------------------- 121 (386)
T PRK06767 122 -------------------------------------------------------------------------------- 121 (386)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecccc
Q psy16848 220 VAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHA 299 (514)
Q Consensus 220 v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~ 299 (514)
...|.++..++..|.+.+++.+ .+++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+
T Consensus 122 -----------~~~gi~~~~~~~~d~~~l~~~i----~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a 186 (386)
T PRK06767 122 -----------EKFMITHSFCDMETEADIENKI----RPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFC 186 (386)
T ss_pred -----------hhcCeEEEEeCCCCHHHHHHhh----CcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCc
Confidence 0112223333333455555444 3468999999999999999999999999999999999999997
Q ss_pred ccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEecHHHHHHHHhh-cCceEeccCCcHHHHHHHHHHHH
Q psy16848 300 VGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVGTKNFIDTIRSY-AAGFIFTTSLPPTVLAGAREAIR 374 (514)
Q Consensus 300 ~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~a~~~~l~ 374 (514)
.+..+. + ...+.|+++.|++|.+++. ||++++++++++.+... ...+ +..+++..++++...|+
T Consensus 187 ~~~~~~------p---l~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~--g~~~~~~~a~l~~~~L~ 255 (386)
T PRK06767 187 SPYLQR------P---LELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDI--GGIMAPFDAWLLLRGLK 255 (386)
T ss_pred ccccCC------c---hhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHh--CCCCCHHHHHHHHcCCC
Confidence 543321 1 1236799999999999764 48999998877665332 2222 23456666655555444
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcccc------------CCCcEEEEEeCC-CccHHHHHHHHHHhCCeEEe
Q psy16848 375 ILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEH------------TPSHIIPIKIGN-PALNTKICDMLLKEKGHYVQ 440 (514)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~------------~~~~~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~ 440 (514)
. +..++++.+++..++.+.|++. ++..+. ..++++.|.+.. .....+|.+.| +..++.++
T Consensus 256 t-----l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l-~~~~~~~s 329 (386)
T PRK06767 256 T-----LAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDL-HFITIAVS 329 (386)
T ss_pred c-----HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhC-CccEEecC
Confidence 2 3346788899999999999987 554221 245688888863 23566888888 57777766
Q ss_pred cccCCCC---C-----------------CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 441 PINYPTV---P-----------------VGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 441 ~~~~~~~---~-----------------~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
-|..... + ..++.+|+|++.. +.+.+++-|.+.+.
T Consensus 330 ~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE----~~~dl~~dl~~al~ 384 (386)
T PRK06767 330 LGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLE----SWEDIVSDLEQALK 384 (386)
T ss_pred CCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHh
Confidence 3321110 0 1246899999954 45555555555554
No 265
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=3.2e-21 Score=196.72 Aligned_cols=214 Identities=19% Similarity=0.202 Sum_probs=162.3
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+..++++++++++.|.+.+++++||++|+..++.++.+ +||+|+++.+.|.++...++
T Consensus 63 ~p~~~~le~~lA~l~g~~~~i~~ssG~~Ai~~~l~all~--~GD~Vi~~~~~y~~~~~~~~------------------- 121 (398)
T PRK08249 63 NPTVQAFEEKVRILEGAEAATAFSTGMAAISNTLYTFLK--PGDRVVSIKDTYGGTNKIFT------------------- 121 (398)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcC--CCCEEEEcCCchHHHHHHHH-------------------
Confidence 577899999999999999999999999999888888866 99999999999987653221
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 122 -------------------------------------------------------------------------------- 121 (398)
T PRK08249 122 -------------------------------------------------------------------------------- 121 (398)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
..+...|+++++++..|.+.+++.+ ++++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|
T Consensus 122 ---------~~~~~~Gi~v~~vd~~d~e~l~~~i----~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~ 188 (398)
T PRK08249 122 ---------EFLPRMGVDVTLCETGDHEQIEAEI----AKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTF 188 (398)
T ss_pred ---------HHHhhCCeEEEEcCCCCHHHHHHhc----CCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCc
Confidence 0112234444445444555555444 346899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIR 374 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~ 374 (514)
+.+.... ....+.|++++|++|++++. ||++++++++++.+....... +..+++..++.+...++
T Consensus 189 a~~~~~~---------~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~--g~~~s~~~a~l~l~~l~ 257 (398)
T PRK08249 189 ATPINQN---------PLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREIN--GATMDPMSAYLILRGMK 257 (398)
T ss_pred CccccCC---------chhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhc--CCCCCHHHHHHHHhCcc
Confidence 8543211 11236889999999999863 388888888888887655433 44677887777777766
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 375 ILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
.+ ....++..+++..+.+.|++.
T Consensus 258 tL-----~~R~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 258 TL-----KLRVRQQQESAMALAKYLQTH 280 (398)
T ss_pred hH-----HHHHHHHHHHHHHHHHHHHcC
Confidence 54 235677778888888888875
No 266
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=3.1e-20 Score=183.05 Aligned_cols=300 Identities=20% Similarity=0.239 Sum_probs=232.1
Q ss_pred chHHHHHHHHHHhHcCCC--cEE-EEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHH
Q psy16848 59 SLFHEKLEEDVAKLHQKE--AGL-VFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNH 135 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~--~~i-~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~ 135 (514)
...+.++.+.+...++.+ .++ +..|||.+.++++..+.. |||+|++-.+.-.+-
T Consensus 37 ~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~--pgdkVLv~~nG~FG~--------------------- 93 (383)
T COG0075 37 VGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVE--PGDKVLVVVNGKFGE--------------------- 93 (383)
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccC--CCCeEEEEeCChHHH---------------------
Confidence 367778888899999876 444 447899999999999977 999988754433221
Q ss_pred HHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhc
Q psy16848 136 LTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTL 215 (514)
Q Consensus 136 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l 215 (514)
T Consensus 94 -------------------------------------------------------------------------------- 93 (383)
T COG0075 94 -------------------------------------------------------------------------------- 93 (383)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCceeeecchHHHHhhCCCCEEEec-----CCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCC
Q psy16848 216 VNPEVAIHASMIQGIRNSSAPKIIYR-----HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGA 290 (514)
Q Consensus 216 ~~~~v~~~~~~~~~~~~~g~~~~~v~-----~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv 290 (514)
.+...+.++|+++..+. .-+.+++++.|++ .+..+++.+.|.-++||...|+++|.++|++||+
T Consensus 94 ---------R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~--~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~ 162 (383)
T COG0075 94 ---------RFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDK--DPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGA 162 (383)
T ss_pred ---------HHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhc--CCCccEEEEEeccCcccccCcHHHHHHHHHHcCC
Confidence 11223334444444444 2367788888874 3457899999999999999999999999999999
Q ss_pred EEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc-CCC-eEEEecHHHHHHHHhhcCc-eE-----------
Q psy16848 291 LTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG-NIG-GYIVGTKNFIDTIRSYAAG-FI----------- 356 (514)
Q Consensus 291 ~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg-~~G-G~l~~~~~~~~~l~~~~~~-~~----------- 356 (514)
++|+|.+-++|.. +...-.++.|+++.+..|.++ ++| |++..+++..+.+...... +.
T Consensus 163 l~iVDaVsS~Gg~--------~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~ 234 (383)
T COG0075 163 LLIVDAVSSLGGE--------PLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYME 234 (383)
T ss_pred EEEEEecccCCCc--------ccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHh
Confidence 9999999998764 222225689999999999995 478 9999999888888755433 11
Q ss_pred ----eccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCC---Cc-EEEEEeCCCccHHHHH
Q psy16848 357 ----FTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTP---SH-IIPIKIGNPALNTKIC 428 (514)
Q Consensus 357 ----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~-~~~i~l~~~~~~~~~~ 428 (514)
+-++.+.....++..+|+.+.+++++++.++++.+.+++++.++++|++..... ++ +..+..|.+.+..++.
T Consensus 235 ~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~~~~~~~ 314 (383)
T COG0075 235 KKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGVDDKKVR 314 (383)
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCCCcHHHH
Confidence 223567778899999999999999999999999999999999999999876532 33 5557788776655566
Q ss_pred HHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Q psy16848 429 DMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 429 ~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~~ 483 (514)
..++++.|+.+.++..+ .....+||......+.+++...+.+|..++++++.
T Consensus 315 ~~~~~~~g~~i~gg~~~---l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 315 RALLKEYGVEIAGGQGP---LKGKIFRIGHMGNVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred HHHHHhCCEEecccccc---cCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence 67766779999887753 33569999998889999999999999999999875
No 267
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.89 E-value=2.1e-21 Score=196.81 Aligned_cols=287 Identities=14% Similarity=0.156 Sum_probs=193.8
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...+++++++++.|.+.+++++||++|+..++ ++.. +||+|+++.+.|.+....+.
T Consensus 51 ~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~~-~ll~--~Gd~Vl~~~~~y~~t~~~~~------------------- 108 (366)
T PRK08247 51 NPTRGVLEQAIADLEGGDQGFACSSGMAAIQLVM-SLFR--SGDELIVSSDLYGGTYRLFE------------------- 108 (366)
T ss_pred CchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHH-HHhC--CCCEEEEecCCcCcHHHHHH-------------------
Confidence 4568999999999999999999999999887665 4554 99999999988877542211
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 109 -------------------------------------------------------------------------------- 108 (366)
T PRK08247 109 -------------------------------------------------------------------------------- 108 (366)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
..+...|+++..++..|.+.+++.+. +++++|++++|+||+|...++++|.++|+++|+++|+|++|
T Consensus 109 ---------~~~~~~G~~v~~vd~~d~~~l~~~i~----~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~ 175 (366)
T PRK08247 109 ---------EHWKKWNVRFVYVNTASLKAIEQAIT----PNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTF 175 (366)
T ss_pred ---------HHhhccCceEEEECCCCHHHHHHhcc----cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCC
Confidence 11223455566666556655555553 45899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEec-HHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVGT-KNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
..+.... + ...+.|++++|++|.+++. ||+++++ +++.+.+...+... +...++..+..+...+
T Consensus 176 ~~~~~~~------p---~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~--g~~~s~~~a~l~~~~l 244 (366)
T PRK08247 176 YTPVLQR------P---LEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAA--GAVLSPFDSWLLIRGM 244 (366)
T ss_pred ccccccC------c---hhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhc--CCCCChHHHHHHHhcc
Confidence 6433211 1 1236899999999999863 4888876 67777776544333 3355666666666655
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcc--ccCCCcEEEEEeCCCccHHHHHHHHH---------HhCCeEEec
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFPV--EHTPSHIIPIKIGNPALNTKICDMLL---------KEKGHYVQP 441 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~~~~~~~~~i~l~~~~~~~~~~~~Ll---------~~~GI~v~~ 441 (514)
+. +...+++.+++++.+.+.|++. ++.. .++.++++.+.+........+.+.+- ..+.+.+.|
T Consensus 245 ~t-----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~~~~~~~~~~~~l~~~~~~~slg~~~sl~~~p 319 (366)
T PRK08247 245 KT-----LALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQDEEWVNPFLKSLKLITFAESLGGVESFITYP 319 (366)
T ss_pred Cc-----HHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEECCHHHHHHHHHcCCcceEccCCCCCceEEECC
Confidence 42 3345667799999999999987 6553 23367888888754222223333321 122334444
Q ss_pred ccCCCC----------CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 442 INYPTV----------PVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 442 ~~~~~~----------~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
+..... ...++.+|++++. |+++.+++-|++.+++
T Consensus 320 ~~~~~~~~~~~~r~~~gi~~~~~R~svGl----E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 320 ATQTHADIPEEIRIANGVCNRLLRFSVGI----ENVEDLIADLKQAFKQ 364 (366)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 432111 0125689999995 4455556666655543
No 268
>PRK06460 hypothetical protein; Provisional
Probab=99.89 E-value=5.1e-21 Score=194.24 Aligned_cols=244 Identities=16% Similarity=0.131 Sum_probs=168.1
Q ss_pred cchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHH
Q psy16848 58 NSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLT 137 (514)
Q Consensus 58 ~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~ 137 (514)
..+..++++++++++.|.+.+++++||++|+..++.++.+ +||+|+++.+.|.....
T Consensus 43 ~~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l~al~~--~Gd~Vl~~~~~~~~ty~--------------------- 99 (376)
T PRK06460 43 ANPTVLELTKKIVELENAEMGVAFSSGMGAISTTALALLK--PGNSVLVHRDMFGRSYR--------------------- 99 (376)
T ss_pred CCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhC--CCCEEEEecCCcCcHHH---------------------
Confidence 3567899999999999998899999999998888888866 99999997655433221
Q ss_pred HHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccC
Q psy16848 138 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVN 217 (514)
Q Consensus 138 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~ 217 (514)
T Consensus 100 -------------------------------------------------------------------------------- 99 (376)
T PRK06460 100 -------------------------------------------------------------------------------- 99 (376)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecc
Q psy16848 218 PEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEV 297 (514)
Q Consensus 218 ~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea 297 (514)
.+...+...|.++..++.++.+.+ ++...+++++|++++|+||+|.++|+++|.++|+++|+++|+|++
T Consensus 100 -------~~~~~~~~~G~~v~~~~~~~~~~l----~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea 168 (376)
T PRK06460 100 -------FFTDYLKNWGVNVDASNPGSDNII----EKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDAT 168 (376)
T ss_pred -------HHHHHHHhhCcEEEEECCCCHHHH----HHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECC
Confidence 011122233444444443332222 222345689999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 298 HAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 298 ~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
|..+.. . .....++|+++.|+||++++. +|++++++++++.+......+ +.+.++..+..+...+
T Consensus 169 ~~~~~~------~---~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~--g~~~~~~~a~~~l~~~ 237 (376)
T PRK06460 169 FSTPIN------Q---KPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTL--GTSLDPHAAYLTLRGI 237 (376)
T ss_pred cCcccc------C---ChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhc--CCCCCHHHHHHHHhch
Confidence 974321 1 111235799999999999753 489999999998887665554 4445554444333333
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcc--c----------------cCCCcEEEEEeCCC-ccHHHHHHHH
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFPV--E----------------HTPSHIIPIKIGNP-ALNTKICDML 431 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~----------------~~~~~~~~i~l~~~-~~~~~~~~~L 431 (514)
+ .++..++++.++++++.+.|++. .+.. . ...|+++.+.+... .....+++.|
T Consensus 238 ~-----~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l 310 (376)
T PRK06460 238 K-----TLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSL 310 (376)
T ss_pred h-----hHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhC
Confidence 3 34567888889999999999876 2210 0 12356889988642 2344455544
No 269
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.89 E-value=4.1e-21 Score=194.43 Aligned_cols=285 Identities=16% Similarity=0.101 Sum_probs=195.0
Q ss_pred hHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHH
Q psy16848 60 LFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQV 139 (514)
Q Consensus 60 ~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 139 (514)
+....+|++++++.|.+++++++||+.|+..++.++.+ +||+|+++++.|......+.
T Consensus 50 Pt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~al~all~--~GD~Vl~~~~~y~~t~~~~~-------------------- 107 (377)
T TIGR01324 50 LTHFALQDAMCELEGGAGCYLYPSGLAAVTNSILAFVK--AGDHVLMVDSAYEPTRYFCD-------------------- 107 (377)
T ss_pred ccHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhcC--CCCEEEEcCCCcHHHHHHHH--------------------
Confidence 56789999999999999999999999999999988866 99999998888876542110
Q ss_pred HHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCc
Q psy16848 140 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPE 219 (514)
Q Consensus 140 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~ 219 (514)
T Consensus 108 -------------------------------------------------------------------------------- 107 (377)
T TIGR01324 108 -------------------------------------------------------------------------------- 107 (377)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecccc
Q psy16848 220 VAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHA 299 (514)
Q Consensus 220 v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~ 299 (514)
..+...|.++..++..+. +.+++..++++++|++++|+||+|...++++|.++|+++|+++|+|++|+
T Consensus 108 --------~~~~~~gi~v~~~d~~~~----e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a 175 (377)
T TIGR01324 108 --------IVLKRMGVDITYYDPLIG----EDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWA 175 (377)
T ss_pred --------HHHHhcCcEEEEECCCCH----HHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 001122334444433222 23444445679999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHH
Q psy16848 300 VGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRI 375 (514)
Q Consensus 300 ~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~ 375 (514)
.|...+ ....++|++++|++|++++. ||+++++++..+.+...... ++...++..+......++.
T Consensus 176 ~g~~~~---------pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~--~G~~l~p~~a~~~~rgl~t 244 (377)
T TIGR01324 176 AGLLFK---------PLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYL--MGQMVDADDAYTTLRGLRT 244 (377)
T ss_pred cccccC---------ccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHH--hCCCCCHHHHHHHHhhhhh
Confidence 766421 12458899999999999763 38888888877766643322 2556777777666666653
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHhC-CCc-c-----------------ccCCCcEEEEEeCC--CccHHHHHHHHHHh
Q psy16848 376 LSSQEGVELRAKHQDIVAYLRNELIQI-GFP-V-----------------EHTPSHIIPIKIGN--PALNTKICDMLLKE 434 (514)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-----------------~~~~~~~~~i~l~~--~~~~~~~~~~Ll~~ 434 (514)
+ ..++++..++...+.+.|++. .+. + ....++++.+.+.+ .....+|.+.| +-
T Consensus 245 l-----~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l-~~ 318 (377)
T TIGR01324 245 L-----GVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHL-QL 318 (377)
T ss_pred H-----HHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhC-Cc
Confidence 3 336777778878888888875 221 0 01235688898863 23356777777 45
Q ss_pred CCeEEecccCCCC----------------CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 435 KGHYVQPINYPTV----------------PVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 435 ~GI~v~~~~~~~~----------------~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
.++.++-|..... ...++.+|++++.. +.+.+++-|.+.++
T Consensus 319 ~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGlE----~~~dl~~dl~~al~ 375 (377)
T TIGR01324 319 FGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGLE----NVDDLKADLKAGFE 375 (377)
T ss_pred ceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCCC----CHHHHHHHHHHHHh
Confidence 5555442221110 01235899999954 44555555555443
No 270
>KOG1403|consensus
Probab=99.89 E-value=7.5e-22 Score=181.41 Aligned_cols=369 Identities=16% Similarity=0.161 Sum_probs=249.1
Q ss_pred chhhhhcCCceeeecccCCCCC-----------ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCc
Q psy16848 9 NFKQVHKSNRVTCRLSSVQYKV-----------PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEA 77 (514)
Q Consensus 9 ~~~~~~~~g~~~~d~~~~~~~~-----------~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 77 (514)
+++..+.+++.+.|-.++.|++ ||+++++...++....++ .++.. .++.+-.+...+.+-+..-
T Consensus 30 P~kivRaq~QYmfDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN---~RFlh--d~lv~cA~~l~stlPeLsv 104 (452)
T KOG1403|consen 30 PLKIVRAQGQYMFDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATISTN---NRFLH--DELVQCARTLTSTLPELSV 104 (452)
T ss_pred chhhehhccceeeccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhccc---chhhH--HHHHHHHHHHhhcCCCceE
Confidence 3556666778888888888872 799999999999985443 23322 2333333334444446666
Q ss_pred EEEEeccccccccchhhccc-cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecc
Q psy16848 78 GLVFTSCYVANDSTLFTLGK-MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETV 156 (514)
Q Consensus 78 ~i~~~sGt~a~~~~l~~l~~-~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~ 156 (514)
++|++||++||.++|+.... ++..|.|.++..+|..+..-+... +..|.+. ....+|.++-.
T Consensus 105 c~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~S---PYKF~~g-----------~~v~kpd~VHV--- 167 (452)
T KOG1403|consen 105 CFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVS---PYKFNQG-----------GGVAKPDYVHV--- 167 (452)
T ss_pred EEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeecc---ceeccCC-----------CCcCCCceeEe---
Confidence 89999999999999976543 567888999888887765333221 1112110 00112222110
Q ss_pred ccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCC
Q psy16848 157 HSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAP 236 (514)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~ 236 (514)
.++|+-|....+
T Consensus 168 ---------------------------------------------------------------APcPDvyrGK~r----- 179 (452)
T KOG1403|consen 168 ---------------------------------------------------------------APCPDVYRGKFR----- 179 (452)
T ss_pred ---------------------------------------------------------------cCCccccccccc-----
Confidence 111222211111
Q ss_pred EEEecCCC-----hhHHHHHHhhcc--CCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccC
Q psy16848 237 KIIYRHND-----VNHLTQVLENMD--VKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYG 304 (514)
Q Consensus 237 ~~~v~~~d-----~~~l~~~l~~~~--~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g 304 (514)
...++..+ -+..++++.+.. ..+.++++.++.++-.|.++| ++++.+..+.+|-+.|.||++. +|+.|
T Consensus 180 ~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG 259 (452)
T KOG1403|consen 180 DKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVG 259 (452)
T ss_pred cccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccc
Confidence 11111111 234445554432 334678889999999999998 7999999999999999999999 88888
Q ss_pred CCCCCccccCCCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchH
Q psy16848 305 EHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEG 381 (514)
Q Consensus 305 ~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 381 (514)
++.+.+. .++. -+||+ +++|.+|. | +.++..+++.+.+....-.+..+++.+|.+++++++.++...++.
T Consensus 260 ~hyWafq-~y~f--iPDIV--tmgKpmGN-GhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~- 332 (452)
T KOG1403|consen 260 SHYWAFQ-TYNF--IPDIV--TMGKPMGN-GHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDEN- 332 (452)
T ss_pred hhhhhhh-hhcc--ccchh--eecccCCC-CCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhh-
Confidence 8775554 3333 68999 99999998 6 889999999998876444444466899999999999999886655
Q ss_pred HHHHHHHHHHHHHHHHHHHhC--CCcccc---CCCcEEEEEeC--------CCccHHHHHHHHHHhCCeEEecccCCCCC
Q psy16848 382 VELRAKHQDIVAYLRNELIQI--GFPVEH---TPSHIIPIKIG--------NPALNTKICDMLLKEKGHYVQPINYPTVP 448 (514)
Q Consensus 382 ~~~~~~~~~~~~~l~~~L~~~--g~~~~~---~~~~~~~i~l~--------~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~ 448 (514)
+.++.++..++|...|+++ ..+.++ .-|.|+.+.+- +...+..+..+|.+.++|+++ ...
T Consensus 333 --Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLls-----aDG 405 (452)
T KOG1403|consen 333 --LQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLS-----ADG 405 (452)
T ss_pred --HHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEe-----cCC
Confidence 7777888888888888776 334433 23446666552 234455677788666779986 233
Q ss_pred CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 449 VGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 449 ~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
..++.+.+-++...+++++++++..|++++..+
T Consensus 406 Ph~NilKiKPPmCFneena~e~v~~ld~iLT~m 438 (452)
T KOG1403|consen 406 PHRNILKIKPPMCFNEENADEFVLGLDEILTVM 438 (452)
T ss_pred CCCceeecCCCcccChhhHHHHHHHHHHHHHHH
Confidence 457899999999999999999999999988644
No 271
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.89 E-value=4.3e-22 Score=199.29 Aligned_cols=296 Identities=21% Similarity=0.239 Sum_probs=198.9
Q ss_pred cCCceeeeccc---CCCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHc--CCCcEEEEeccccc
Q psy16848 15 KSNRVTCRLSS---VQYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLH--QKEAGLVFTSCYVA 87 (514)
Q Consensus 15 ~~g~~~~d~~~---~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~--~~~~~i~~~sGt~a 87 (514)
.+|+.++||.+ +.-++ ||++.+++.+++.+...... .....+...++.+++.+.+ +.++++|++||++|
T Consensus 13 ~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~----~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseA 88 (339)
T PF00202_consen 13 VDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSF----SGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEA 88 (339)
T ss_dssp TTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCST----TTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHH
T ss_pred CCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccc----cceeccchhhhhhhhhhccccccceeeeccCchHH
Confidence 47888999953 33443 79999999999998544321 1123577889999999999 56778999999999
Q ss_pred cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchh
Q psy16848 88 NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK 167 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (514)
++.|++.... ..-.+..+++++++.|+|.||-..
T Consensus 89 ve~Alkla~~----------------------------------------~~~~~~~~~r~~il~~~~~yHG~t------ 122 (339)
T PF00202_consen 89 VEAALKLARQ----------------------------------------YHNKRAYTGRRKILAFEGSYHGRT------ 122 (339)
T ss_dssp HHHHHHHHHH----------------------------------------HHHHTHHHTTTEEEEETTTB-TSS------
T ss_pred HHHHHHHhhc----------------------------------------ccccccccCCceEEEeeeeeeccC------
Confidence 9999965431 001123456778888888886211
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhH
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNH 247 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~ 247 (514)
.|.....+. ..+..........+..+|..+...
T Consensus 123 --------------------~~~~s~~~~---------------------------~~~~~~~~~~~~~~~~~p~~~~~~ 155 (339)
T PF00202_consen 123 --------------------LGALSLTGN---------------------------PPYRKGFGPLYPGVVFVPFPDPAA 155 (339)
T ss_dssp --------------------HHHHHHSSS---------------------------THHHTTTCSSSTTEEEEETTCHHH
T ss_pred --------------------cccccccCC---------------------------ccccccccccccccccccCCccch
Confidence 000000000 011111112222345566555444
Q ss_pred ----------HHHHHhhccCCCceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccc
Q psy16848 248 ----------LTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGE 312 (514)
Q Consensus 248 ----------l~~~l~~~~~~~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~ 312 (514)
+++.+.+...++++++++++++...|...+ +++|+++|++||+++|+||+++ +|+.|+.+ ..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~--a~~ 233 (339)
T PF00202_consen 156 DEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF--ASE 233 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS--GHH
T ss_pred hhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc--cee
Confidence 555555555677899999999999887765 8999999999999999999999 66766533 233
Q ss_pred cCCCccCceEEEcCCcccccCCC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHH
Q psy16848 313 RDGQLHNMDIISGTLGKAFGNIG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQ 389 (514)
Q Consensus 313 ~~~~~~~~di~~~S~sK~lg~~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 389 (514)
.+++ .||++ +++|++++ | |.+++++++.+.+....... +...+++.++++.++|+.+.+++ +.++.+
T Consensus 234 ~~gv--~PDiv--~~gK~l~g-G~p~sav~~~~~i~~~~~~~~~~~--T~~g~p~~~aaa~~~l~~~~~~~---~~~~~~ 303 (339)
T PF00202_consen 234 HYGV--DPDIV--TFGKGLGG-GLPISAVLGSEEIMEAFQPGSHGS--TFGGNPLSCAAALATLEILEEED---LLERVR 303 (339)
T ss_dssp HHTS--SSSEE--EEEGGGGT-TSSEEEEEEEHHHHTTSCTTSSTC--TTTT-HHHHHHHHHHHHHHHHTT---HHHHHH
T ss_pred cccc--cCccc--ccccchhh-hhhcccccccchhhcccccccccc--ccccchHhhhhhhhHHHhhccHH---HHHHHH
Confidence 4554 89999 78899987 5 88899999888775544333 55789999999999999997766 667777
Q ss_pred HHHHHHHHHHHhC--CCcc---ccCCCcEEEEEeC
Q psy16848 390 DIVAYLRNELIQI--GFPV---EHTPSHIIPIKIG 419 (514)
Q Consensus 390 ~~~~~l~~~L~~~--g~~~---~~~~~~~~~i~l~ 419 (514)
++.+++.+.|+++ ..+. +...|.++.+++.
T Consensus 304 ~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 304 ELGERLREGLRELAARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEES
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEeeeCeEEEEEEE
Confidence 8888888777765 1122 2345667777653
No 272
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.89 E-value=5.1e-21 Score=194.81 Aligned_cols=243 Identities=19% Similarity=0.188 Sum_probs=175.2
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...++++++++++|.+++++++||+.|+..++.++.+ +||+|+++...|.+....+
T Consensus 53 ~p~~~~le~~la~l~g~~~~~~~~sG~~Ai~~al~al~~--~Gd~Vl~~~~~~~~t~~~~-------------------- 110 (380)
T TIGR01325 53 NPTVAAFEERIAALEGAERAVATATGMSAIQAALMTLLQ--AGDHVVASRSLFGSTVGFI-------------------- 110 (380)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC--CCCEEEEecCCcchHHHHH--------------------
Confidence 356789999999999999999999999999999988866 9999999888776654211
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 111 -------------------------------------------------------------------------------- 110 (380)
T TIGR01325 111 -------------------------------------------------------------------------------- 110 (380)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
...+...|.++..++.+|.+.+++.+ .+++++|++++|+||+|.+.++++|.++|+++|+++|+|++|
T Consensus 111 --------~~~~~~~g~~v~~v~~~d~~~l~~~i----~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~ 178 (380)
T TIGR01325 111 --------SEILPRFGIEVSFVDPTDLNAWEAAV----KPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVF 178 (380)
T ss_pred --------HHHHHHhCCEEEEECCCCHHHHHHhc----CCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCC
Confidence 11223345566666665665555544 346899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIR 374 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~ 374 (514)
+.+... .....++|+++.|++|++++.| |++++++++++.++...... +...++..+..+...++
T Consensus 179 ~~~~~~---------~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~--g~~~~p~~a~~~l~~l~ 247 (380)
T TIGR01325 179 ATPVLQ---------QPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHT--GPAMSPFNAWVLLKGLE 247 (380)
T ss_pred cccccC---------CchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhh--CCCCCHHHHHHHHhccC
Confidence 844321 1113368999999999998644 88888888888777654333 34556666665555554
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcc-----cc-------------CCCcEEEEEeCCCccHHHHHHHH
Q psy16848 375 ILSSQEGVELRAKHQDIVAYLRNELIQI-GFPV-----EH-------------TPSHIIPIKIGNPALNTKICDML 431 (514)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-----~~-------------~~~~~~~i~l~~~~~~~~~~~~L 431 (514)
.+ ....++..+++..+.+.|++. ++.. .. ..++++.+.+.+......|.+.|
T Consensus 248 tl-----~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~f~~~l 318 (380)
T TIGR01325 248 TL-----SLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRAAAWKVLDAV 318 (380)
T ss_pred cH-----HHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcC
Confidence 33 346777778888888888876 2221 11 13558889887433345566655
No 273
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.89 E-value=6.8e-21 Score=196.73 Aligned_cols=220 Identities=18% Similarity=0.244 Sum_probs=148.7
Q ss_pred EEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCC
Q psy16848 237 KIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQ 316 (514)
Q Consensus 237 ~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~ 316 (514)
+..++++|++.+++.+++. .+++++|++++.++..+..-.+++|+++|++||+++|+||+++ |+. ..+.+....+++
T Consensus 166 ~~~~~~~d~~~l~~~l~~~-~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t-G~~-~~~~g~~~~~gv 242 (431)
T PRK06209 166 TVTFRYNDIASLEALFEDH-PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMIT-GFR-WHMRGAQKLYGI 242 (431)
T ss_pred ccccCCCCHHHHHHHHHhC-CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-cCC-cCcchhhHHhCC
Confidence 3456688999999998753 3468899999987552222228999999999999999999996 431 122223333444
Q ss_pred ccCceEEEcCCcccccC--CCeEEEecHHHHHH--HHhh--cCce--EeccCCcHHHHHHHHHHHHHhhhchHHHHHHHH
Q psy16848 317 LHNMDIISGTLGKAFGN--IGGYIVGTKNFIDT--IRSY--AAGF--IFTTSLPPTVLAGAREAIRILSSQEGVELRAKH 388 (514)
Q Consensus 317 ~~~~di~~~S~sK~lg~--~GG~l~~~~~~~~~--l~~~--~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 388 (514)
.+|++ +++|++|+ ++|++++++++.+. +... ...+ +.+.+.+++.++++.++|+.+.++. +.+++
T Consensus 243 --~PDi~--t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~ 315 (431)
T PRK06209 243 --VPDLS--CFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDED---VIERL 315 (431)
T ss_pred --Cccee--eehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHH
Confidence 78987 89999986 34888899888876 3111 2222 2244567899999999999986655 67778
Q ss_pred HHHHHHHHHHHHhC----CCcc-ccCCCcEEEEEe---CC---Ccc--HHHHHHHHHHhCCeEEecccCCCCCCCCcEEE
Q psy16848 389 QDIVAYLRNELIQI----GFPV-EHTPSHIIPIKI---GN---PAL--NTKICDMLLKEKGHYVQPINYPTVPVGEEKIR 455 (514)
Q Consensus 389 ~~~~~~l~~~L~~~----g~~~-~~~~~~~~~i~l---~~---~~~--~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iR 455 (514)
+++.+++++.|++. ++.. +...+.++.+.+ .. ... ...+.+.++ ++||++. .++
T Consensus 316 ~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~p------------~l~ 382 (431)
T PRK06209 316 HEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETI-RRGVLMP------------SLV 382 (431)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHH-HCCcccc------------ccc
Confidence 88888888777653 3321 112233333222 11 111 235677785 8999862 133
Q ss_pred EEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 456 LAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 456 l~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+ +..+|++|+++++++++++++++
T Consensus 383 i--s~~ht~~dId~~l~~l~~~l~~~ 406 (431)
T PRK06209 383 V--SYAHGDADIERTIDAVHGALGVY 406 (431)
T ss_pred c--cccCCHHHHHHHHHHHHHHHHHH
Confidence 3 35689999999999999998876
No 274
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=2.9e-21 Score=196.38 Aligned_cols=212 Identities=18% Similarity=0.192 Sum_probs=155.8
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...++|+++++++|.+++++++||+.|+..++.++.+ +||+|+++.+.|.++...++..
T Consensus 52 np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~~~l~~ll~--~GD~Vlv~~~~y~~~~~~~~~~----------------- 112 (385)
T PRK08574 52 NPTLRPLEEALAKLEGGVDALAFNSGMAAISTLFFSLLK--AGDRVVLPMEAYGTTLRLLKSL----------------- 112 (385)
T ss_pred CccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhC--CCCEEEEcCCCchhHHHHHHHh-----------------
Confidence 466889999999999999999999999999999888866 9999999999998876544221
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 113 -------------------------------------------------------------------------------- 112 (385)
T PRK08574 113 -------------------------------------------------------------------------------- 112 (385)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCC-CceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVK-IPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEV 297 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~-~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea 297 (514)
...|+++..++. +.+.+++.+ .+ ++++|++++++||+|.++|+++|.++|+++|+++|+|++
T Consensus 113 ------------~~~g~~v~~~~~-d~~~l~~~i----~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t 175 (385)
T PRK08574 113 ------------EKFGVKVVLAYP-STEDIIEAI----KEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNT 175 (385)
T ss_pred ------------hccCcEEEEECC-CHHHHHHhc----CccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECC
Confidence 111222222221 333333333 33 689999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEE-EecHHHHHHHHhhcCceEeccCCcHHHHHHHHHH
Q psy16848 298 HAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYI-VGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREA 372 (514)
Q Consensus 298 ~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~ 372 (514)
++.+... ..+..+.|++++|++|++++. ||++ +.++++.+.++.....+ +..+++..++.+...
T Consensus 176 ~a~~~~~---------~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~--g~~~~p~~a~l~l~~ 244 (385)
T PRK08574 176 FATPLLY---------RPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRL--GTIMQPFEAYLVLRG 244 (385)
T ss_pred CCccccC---------ChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhc--CCCCCHHHHHHHHcc
Confidence 9855431 112346899999999999753 4744 45678888776554433 446777777666666
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 373 IRILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 373 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
++.+ ..+.++..++..++.+.|++.
T Consensus 245 l~tL-----~~R~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 245 LKTL-----EVRFERQCRNAMAIAEFLSEH 269 (385)
T ss_pred cCcH-----HHHHHHHHHHHHHHHHHHHcC
Confidence 6543 346666677888888888765
No 275
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.88 E-value=4.5e-21 Score=195.98 Aligned_cols=213 Identities=17% Similarity=0.137 Sum_probs=161.5
Q ss_pred hHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHH
Q psy16848 60 LFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQV 139 (514)
Q Consensus 60 ~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 139 (514)
+..++++++++++.|.+++++++||+.|+..++.++.. +||+|+++...|......
T Consensus 70 p~~~~le~~lA~l~g~~~al~~~sG~~Ai~~~l~all~--~Gd~Vl~~~~~~~~t~~~---------------------- 125 (403)
T PRK07810 70 PTVSMFEERLRLIEGAEACFATASGMSAVFTALGALLG--AGDRLVAARSLFGSCFVV---------------------- 125 (403)
T ss_pred chHHHHHHHHHHHhCCCcEEEECChHHHHHHHHHHHhC--CCCEEEEccCCcchHHHH----------------------
Confidence 45789999999999999999999999999888888865 999999988766554321
Q ss_pred HHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCc
Q psy16848 140 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPE 219 (514)
Q Consensus 140 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~ 219 (514)
T Consensus 126 -------------------------------------------------------------------------------- 125 (403)
T PRK07810 126 -------------------------------------------------------------------------------- 125 (403)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecccc
Q psy16848 220 VAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHA 299 (514)
Q Consensus 220 v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~ 299 (514)
+...+...|+++++++..|.+.+++.+. +++++|++++|+||+|.+.++++|.++|+++|+++|+|++|+
T Consensus 126 ------~~~~~~~~G~~v~~vd~~d~~~l~~ai~----~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a 195 (403)
T PRK07810 126 ------CNEILPRWGVETVFVDGEDLSQWEEALS----VPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFA 195 (403)
T ss_pred ------HHHHHHHcCcEEEEECCCCHHHHHHhcC----cCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCC
Confidence 1122334466666776666666666553 458999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHHHH-HHHhhcCceEeccCCcHHHHHHHHHHHH
Q psy16848 300 VGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNFID-TIRSYAAGFIFTTSLPPTVLAGAREAIR 374 (514)
Q Consensus 300 ~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~a~~~~l~ 374 (514)
.+.... ....++|++++|++|++++.| |+++++++.+. .++...... +..+++..++.+...|+
T Consensus 196 ~~~~~~---------~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~--g~~~s~~~a~l~l~~L~ 264 (403)
T PRK07810 196 TPLLQR---------GLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHT--GPALSAFNAWVLLKGLE 264 (403)
T ss_pred ccccCC---------hhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHh--CCCCCHHHHHHHHhccC
Confidence 554311 113368999999999997643 88888877554 344332222 34678888888777776
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 375 ILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
.+ ..+.++..++..++.+.|++.
T Consensus 265 tl-----~~R~~~~~~~a~~~a~~L~~~ 287 (403)
T PRK07810 265 TL-----ALRVRHSNASALRIAEFLEGH 287 (403)
T ss_pred cH-----HHHHHHHHHHHHHHHHHHhcC
Confidence 54 346777788888888888876
No 276
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.88 E-value=7.4e-21 Score=194.42 Aligned_cols=287 Identities=16% Similarity=0.162 Sum_probs=191.4
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...++++++++++|.+++++++||+.|+..++.++.+ +||+|+++.+.|.+....++
T Consensus 64 ~p~~~~Le~~lA~l~G~~~~~~~~sG~~Ai~~~l~~~l~--~Gd~Vl~~~~~y~~~~~~~~------------------- 122 (398)
T PRK07504 64 NPTVDMFEKRMCALEGAEDARATASGMAAVTAAILCQVK--AGDHVVAARALFGSCRYVVE------------------- 122 (398)
T ss_pred CchHHHHHHHHHHHhCCCeeeEecCHHHHHHHHHHHHhC--CCCEEEEcCCchhHHHHHHH-------------------
Confidence 355789999999999999999999999998877777665 99999999988877542221
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 123 -------------------------------------------------------------------------------- 122 (398)
T PRK07504 123 -------------------------------------------------------------------------------- 122 (398)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
..+...|.+++.++..|.+.+++.+ ++++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|
T Consensus 123 ---------~~~~~~G~~v~~vd~~d~e~l~~ai----~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~ 189 (398)
T PRK07504 123 ---------TLLPRYGIESTLVDGLDLDNWEKAV----RPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVF 189 (398)
T ss_pred ---------HHHhhcCeEEEEECCCCHHHHHHhc----CcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCc
Confidence 0111234455555544555555444 456899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHHHH-HHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNFID-TIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
+.+.... . ...++|++++|++|++++.| |+++++++.+. .++...... +..+++..++.+...|
T Consensus 190 a~~~~~~-------~--~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~--g~~~s~~~A~~~l~~L 258 (398)
T PRK07504 190 ATPLFQK-------P--LELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHT--GPSLSPFNAWTLLKGL 258 (398)
T ss_pred cccccCC-------c--hhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHh--CCCCCHHHHHHHHhcc
Confidence 8554311 1 13368999999999997644 78888777654 343222222 3467888888877777
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCc-c-----------------ccCCCcEEEEEeCCC-ccHHHHHHHHHH
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFP-V-----------------EHTPSHIIPIKIGNP-ALNTKICDMLLK 433 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-----------------~~~~~~~~~i~l~~~-~~~~~~~~~Ll~ 433 (514)
+.+ ..+.++..++...+.+.|++. ++. + ....++++.|.+.+. .....|++.| +
T Consensus 259 ~tl-----~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l-~ 332 (398)
T PRK07504 259 ETL-----PVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNAL-K 332 (398)
T ss_pred chH-----HHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhC-C
Confidence 654 346666778888888888875 332 0 011256899998532 2334555555 2
Q ss_pred hCCeEEecccC------CC--------------CCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 434 EKGHYVQPINY------PT--------------VPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 434 ~~GI~v~~~~~------~~--------------~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
--.+.++-|.. |. ....++.+|+++++.. .+.+++-|++.+++
T Consensus 333 ~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~----~~dl~~dl~~al~~ 395 (398)
T PRK07504 333 IVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGLED----TDDLIEDLAAALKK 395 (398)
T ss_pred cceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCC----HHHHHHHHHHHHHh
Confidence 22222221110 00 0012578999999544 45555555555543
No 277
>PRK02769 histidine decarboxylase; Provisional
Probab=99.88 E-value=5.1e-20 Score=186.08 Aligned_cols=296 Identities=17% Similarity=0.144 Sum_probs=213.4
Q ss_pred cchHHHHHHHHHHhHcCCC--c--EEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCCh
Q psy16848 58 NSLFHEKLEEDVAKLHQKE--A--GLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDV 133 (514)
Q Consensus 58 ~~~~~~~~~~~la~~~~~~--~--~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~ 133 (514)
..+..+++.+++++++|.+ . ++|+++||++|+.++.+.....++++|++++.+|.++..+++..|.+...++...
T Consensus 63 ~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~- 141 (380)
T PRK02769 63 SFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLP- 141 (380)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCC-
Confidence 4577788999999999864 2 3677778999887776543334789999999999999988887776544332100
Q ss_pred HHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHh
Q psy16848 134 NHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISG 213 (514)
Q Consensus 134 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~ 213 (514)
.|
T Consensus 142 --------------------------------------------------------------~g---------------- 143 (380)
T PRK02769 142 --------------------------------------------------------------NG---------------- 143 (380)
T ss_pred --------------------------------------------------------------CC----------------
Confidence 00
Q ss_pred hccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcC---C
Q psy16848 214 TLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHG---A 290 (514)
Q Consensus 214 ~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~g---v 290 (514)
.-|.+.+++.+.+. +.++.+|+++.++|++|.+.|+++|.++|+++| +
T Consensus 144 ----------------------------~id~~~L~~~i~~~-~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~ 194 (380)
T PRK02769 144 ----------------------------EIDYDDLISKIKEN-KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDY 194 (380)
T ss_pred ----------------------------cCcHHHHHHHHHhC-CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCce
Confidence 11667777777665 556889999999999999999999999999998 6
Q ss_pred EEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc-CCC-eEEEecHHHHHHHHhhcCc-----eEeccCCcH
Q psy16848 291 LTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG-NIG-GYIVGTKNFIDTIRSYAAG-----FIFTTSLPP 363 (514)
Q Consensus 291 ~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg-~~G-G~l~~~~~~~~~l~~~~~~-----~~~~~~~~~ 363 (514)
++++|.+++.+..-... ...+.+. ..++|.++.|.||+++ +.| |+++.+++.++.+...... .....+.+.
T Consensus 195 ~lHVDaA~gg~~~p~~~-~~~~~d~-~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g 272 (380)
T PRK02769 195 YIHADAALSGMILPFVN-NPPPFSF-ADGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNG 272 (380)
T ss_pred EEEEEecccceeecccC-ccccCCc-cCCCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCc
Confidence 99999999965431000 0011222 2378999999999987 666 8888887776655321111 111223455
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCcccc-CCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecc
Q psy16848 364 TVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEH-TPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPI 442 (514)
Q Consensus 364 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~ 442 (514)
....++.++|+.+...+..++.++..++.+++.+.|++.|++... +....+.+..++ .+ + .+|..+.+.
T Consensus 273 ~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~f~~~~----~~----~--~~~w~l~~~ 342 (380)
T PRK02769 273 HTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPNSITVVFPCPS----ER----I--WKKWHLATS 342 (380)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEEEcCCC----HH----H--HhCeeEccc
Confidence 667788888998888888999999999999999999998887654 445566665443 12 2 145555421
Q ss_pred cCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 443 NYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 443 ~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
...+|+.+...+|++.+|++++.|.+.+...
T Consensus 343 --------~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~ 373 (380)
T PRK02769 343 --------GNQAHIITMPHHNKQQIDSLIDELIFDLKNP 373 (380)
T ss_pred --------CCEEEEEECCCCCHHHHHHHHHHHHHHHhcc
Confidence 2489999999999999999999998877643
No 278
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.88 E-value=5.1e-20 Score=187.65 Aligned_cols=312 Identities=21% Similarity=0.222 Sum_probs=204.4
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccc
Q psy16848 32 KGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNH 111 (514)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h 111 (514)
++-.+++.+.+.. +. .. ..+...++|+++++++|.+++++++|||+|+.+++.++. .++||+|+++.++|
T Consensus 14 ~~e~~~~~~~l~~-~~------~~--~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~-~~~Gd~Viv~~~~~ 83 (379)
T PRK11658 14 DEELAAVKEVLRS-GW------IT--TGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALG-IGPGDEVITPSLTW 83 (379)
T ss_pred HHHHHHHHHHHHc-CC------cc--CCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcC-CCCCCEEEECCCcH
Confidence 4446667776654 11 11 135679999999999999999999999999999998873 23999999999999
Q ss_pred hhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 112 ASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
.+...++...|++++.++.+
T Consensus 84 ~~~~~~~~~~G~~~v~vd~~------------------------------------------------------------ 103 (379)
T PRK11658 84 VSTLNMIVLLGATPVMVDVD------------------------------------------------------------ 103 (379)
T ss_pred HHHHHHHHHcCCEEEEEecC------------------------------------------------------------
Confidence 99887776666665544321
Q ss_pred ccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCC
Q psy16848 192 GEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSM 271 (514)
Q Consensus 192 ~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~np 271 (514)
.+++..+.+.+++..++++++|+ +.|+
T Consensus 104 --------------------------------------------------~~~~~~d~~~l~~~i~~~tkav~---~~~~ 130 (379)
T PRK11658 104 --------------------------------------------------RDTLMVTPEAIEAAITPRTKAII---PVHY 130 (379)
T ss_pred --------------------------------------------------CCcCCcCHHHHHHhcccCCeEEE---EeCC
Confidence 11111222333333445688887 3456
Q ss_pred CccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC-CCeEEEec-HHHHHHHH
Q psy16848 272 TGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN-IGGYIVGT-KNFIDTIR 349 (514)
Q Consensus 272 tG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~-~GG~l~~~-~~~~~~l~ 349 (514)
+|...++++|.++|+++|+++|+|++|++|... .+.. .+ ..+.+++.++.+|.+.. .||+++.+ +++.++++
T Consensus 131 ~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~-~~~~----~g-~~g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~ 204 (379)
T PRK11658 131 AGAPADLDAIRAIGERYGIPVIEDAAHAVGTYY-KGRH----IG-ARGTAIFSFHAIKNITCAEGGLVVTDDDELADRLR 204 (379)
T ss_pred CCCcCCHHHHHHHHHHcCCeEEEECCCccCCeE-CCee----cC-CCCCEEEeCCCCCcCcccCceEEEECCHHHHHHHH
Confidence 899999999999999999999999999976531 1111 11 12346675566687743 45877764 77777766
Q ss_pred hhcC-c---------------------eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCc-c
Q psy16848 350 SYAA-G---------------------FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFP-V 406 (514)
Q Consensus 350 ~~~~-~---------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~ 406 (514)
.... + .+++..++.+..+.....++ .+++..++.+++.+++.+.|++.++. +
T Consensus 205 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~-----~l~~~~~~r~~~a~~~~~~L~~~~~~~~ 279 (379)
T PRK11658 205 SLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLA-----KLEALNARRREIAARYLQALADLPFQPL 279 (379)
T ss_pred HHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhcCCCCccC
Confidence 4321 1 01122344445555555444 44567888888888888999876432 2
Q ss_pred ccCC-----C-cEEEEEeCC---CccHHHHHHHHHHhCCeEEecccCCC--------------CCC----CCcEEEEEeC
Q psy16848 407 EHTP-----S-HIIPIKIGN---PALNTKICDMLLKEKGHYVQPINYPT--------------VPV----GEEKIRLAPT 459 (514)
Q Consensus 407 ~~~~-----~-~~~~i~l~~---~~~~~~~~~~Ll~~~GI~v~~~~~~~--------------~~~----~~~~iRl~~~ 459 (514)
..+. . ..+.+.++. +.+.+++.+.| +++||.+.....+. .+. ..+.+.+.++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~ 358 (379)
T PRK11658 280 SLPAWPHQHAWHLFIIRVDEERCGISRDALMEAL-KERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLF 358 (379)
T ss_pred cCCCCCCceeEEEEEEEECCccccCCHHHHHHHH-HHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCC
Confidence 1111 1 234455543 23578899999 59999865322110 000 1367778888
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q psy16848 460 PFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 460 ~~~t~e~id~~~~~l~~~l 478 (514)
...+++|++++++.+++++
T Consensus 359 ~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 359 PDMTDADVDRVITALQQIA 377 (379)
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 8899999999999999875
No 279
>KOG1549|consensus
Probab=99.88 E-value=1.5e-20 Score=184.25 Aligned_cols=344 Identities=17% Similarity=0.145 Sum_probs=213.6
Q ss_pred eeeecccCCCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC--cEEEEeccccccccchhhcc
Q psy16848 19 VTCRLSSVQYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE--AGLVFTSCYVANDSTLFTLG 96 (514)
Q Consensus 19 ~~~d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~~i~~~sGt~a~~~~l~~l~ 96 (514)
.++|..+.... +|.|.+++.+.+..+-.++....+........++.|+.+|++.|++ +.+|+.++|++|.+++..+.
T Consensus 45 vyld~~at~p~-~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~ 123 (428)
T KOG1549|consen 45 VYLDNQATGPM-DPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVLKGVA 123 (428)
T ss_pred EEEecCcCCCC-CHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhh
Confidence 34554433322 6899999999888643333222233333444789999999999865 35666778889988888876
Q ss_pred ccCCCc----eEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhh
Q psy16848 97 KMIPGL----HYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEV 172 (514)
Q Consensus 97 ~~~~gd----~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (514)
. ..+| +|++-..+|+++..+++.
T Consensus 124 ~-~~~~~~~k~iitl~~eH~~v~~s~~~---------------------------------------------------- 150 (428)
T KOG1549|consen 124 R-FFGDKTKKHIITLQTEHPCVLDSCRA---------------------------------------------------- 150 (428)
T ss_pred c-cccccccceEEEecccCcchhHHHHH----------------------------------------------------
Confidence 3 3566 999999999998755432
Q ss_pred hhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC-CChhHHHHH
Q psy16848 173 SHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH-NDVNHLTQV 251 (514)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~ 251 (514)
+...|.++.++|. ++...+.+.
T Consensus 151 ---------------------------------------------------------l~~~g~~Vt~lpv~~~~~~d~~~ 173 (428)
T KOG1549|consen 151 ---------------------------------------------------------LQEEGLEVTYLPVEDSGLVDISK 173 (428)
T ss_pred ---------------------------------------------------------HHhcCeEEEEeccCccccccHHH
Confidence 2233455666662 344555666
Q ss_pred HhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccc
Q psy16848 252 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 252 l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l 331 (514)
+++..+++|+++.+.+++|..|+.+|+++|.++|+++|+.+++|.+|+.|.. +.+..+.++|+++.|.||++
T Consensus 174 ~~~~i~~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i--------~vDV~eln~D~~s~s~HK~y 245 (428)
T KOG1549|consen 174 LREAIRSKTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKI--------PVDVQELNADFLSISAHKIY 245 (428)
T ss_pred HHHhcCCCceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCc--------cccHHHcCchheeeeccccc
Confidence 6677778899999999999999999999999999999999999999998765 34444569999999999999
Q ss_pred cCCC-eEEEecH--HHHHHHHhhcCce----EeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--
Q psy16848 332 GNIG-GYIVGTK--NFIDTIRSYAAGF----IFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-- 402 (514)
Q Consensus 332 g~~G-G~l~~~~--~~~~~l~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 402 (514)
|++| |++++++ +.+........+. ..+.+...+.+...-.+.++..+ ........+....+.+...+...
T Consensus 246 gp~~iGaLYvr~~~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~-~~~~~~~~~~~~~~~ll~~i~~~~~ 324 (428)
T KOG1549|consen 246 GPPGIGALYVRRKRPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNK-EMAYDEAIIKRLSEKLLMGIGQSLP 324 (428)
T ss_pred CCCcceEEEEccCCCcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHh-hcchhHHHHHHHHHHHHHHHhhhCc
Confidence 9998 9999886 1111111111110 01223444555555555555432 21223333334555555554332
Q ss_pred CCccccC----CCcEEEEEeC--CCc-cHHHHHHHHHHhCCeEEeccc-CC--C-------CCCCCcEEEEEeCCCCCHH
Q psy16848 403 GFPVEHT----PSHIIPIKIG--NPA-LNTKICDMLLKEKGHYVQPIN-YP--T-------VPVGEEKIRLAPTPFHTRE 465 (514)
Q Consensus 403 g~~~~~~----~~~~~~i~l~--~~~-~~~~~~~~Ll~~~GI~v~~~~-~~--~-------~~~~~~~iRl~~~~~~t~e 465 (514)
.+....+ ......+-++ .+. ...+.....+ ..|..+.... .| . .......+||+++.+++++
T Consensus 325 ~~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l-~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~ 403 (428)
T KOG1549|consen 325 EVTLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVAL-SSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEE 403 (428)
T ss_pred hhhccCCcccccccceeeecccccCcchhhhhhhhhh-cccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHH
Confidence 1111111 1122233333 211 1111111111 2222222111 00 0 0113579999999999999
Q ss_pred HHHHHHHHHHHHHHHcCC
Q psy16848 466 MIDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 466 ~id~~~~~l~~~l~~~~~ 483 (514)
|++++++.+.+.+..+..
T Consensus 404 di~~~~~~i~~~v~~~~~ 421 (428)
T KOG1549|consen 404 DIDYLVDAIKKLVSLLRE 421 (428)
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 999999999998887653
No 280
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.88 E-value=4.7e-20 Score=188.80 Aligned_cols=216 Identities=20% Similarity=0.183 Sum_probs=159.7
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...++++.++++.|.+++++++||+.|+..++.++.+ +||+|+++.+.|..+....
T Consensus 64 ~p~~~~le~~lA~l~g~~~~i~~~sG~~Al~~~l~~ll~--~Gd~Viv~~~~y~~t~~~~-------------------- 121 (403)
T PRK07503 64 NPTLALLEQRMASLEGGEAAVALASGMGAITATLWTLLR--PGDEVIVDQTLYGCTFAFL-------------------- 121 (403)
T ss_pred CchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcC--CCCEEEEccCccchHHHHH--------------------
Confidence 356789999999999999999999999998888887765 9999999998886544211
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 122 -------------------------------------------------------------------------------- 121 (403)
T PRK07503 122 -------------------------------------------------------------------------------- 121 (403)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
...+...|+++++++..|.+.+++.+. +++++|++++++||+|.+.++++|.++|+++|+++|+|++|
T Consensus 122 --------~~~~~~~G~~v~~vd~~d~~~l~~~i~----~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~ 189 (403)
T PRK07503 122 --------HHGLGEFGVTVRHVDLTDPAALKAAIS----DKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTY 189 (403)
T ss_pred --------HHHHhhCCEEEEEeCCCCHHHHHHhcC----ccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCC
Confidence 111223455566666555555555443 46899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIR 374 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~ 374 (514)
+.+..+. + . ..+.|++++|++|++++. ||+++.++++.++++........+..+++..++.+...|+
T Consensus 190 a~~~~~~------~-l--~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~ 260 (403)
T PRK07503 190 CTPYLQR------P-L--ELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLK 260 (403)
T ss_pred cccccCC------c-h--hhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc
Confidence 8554321 1 1 236799999999999874 3888888888888764311111244678888877777665
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 375 ILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
.+ ..+.++..++...+.+.|++.
T Consensus 261 tl-----~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 261 TL-----ALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred hH-----HHHHHHHHHHHHHHHHHHHhC
Confidence 44 235556667777888888775
No 281
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=1.8e-20 Score=191.27 Aligned_cols=283 Identities=14% Similarity=0.140 Sum_probs=192.3
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+..++++++++++.|.+.+++++||+.|+..++. +.+ +||+|+++.+.|.++...+
T Consensus 53 ~p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~~l~-~l~--~Gd~Vlv~~~~y~~~~~~~-------------------- 109 (390)
T PRK08064 53 NPTREALEDIIAELEGGTKGFAFASGMAAISTAFL-LLS--KGDHVLISEDVYGGTYRMI-------------------- 109 (390)
T ss_pred ChhHHHHHHHHHHHhCCCCeEEECCHHHHHHHHHH-HhC--CCCEEEEccCccchHHHHH--------------------
Confidence 46788999999999999899999999998877774 444 9999999999887655221
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 110 -------------------------------------------------------------------------------- 109 (390)
T PRK08064 110 -------------------------------------------------------------------------------- 109 (390)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
...+...|++++.++..|.+.+++.+ ++++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|
T Consensus 110 --------~~~~~~~G~~v~~v~~~d~~~l~~~l----~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~ 177 (390)
T PRK08064 110 --------TEVLSRFGIEHTFVDMTNLEEVAQNI----KPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTF 177 (390)
T ss_pred --------HHHHHHcCCEEEEECCCCHHHHHHhc----CCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCC
Confidence 11223345566666655555444444 456899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
..+... .....++|+++.|+||++++. +|+++. ++++.+.++.....+ +...++..+..+...+
T Consensus 178 ~~~~~~---------~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~--g~~~~~~~a~l~~~gl 246 (390)
T PRK08064 178 LTPLLQ---------KPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSF--GAVLGVQDCWLVLRGL 246 (390)
T ss_pred Cccccc---------CchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhc--CCCCCHHHHHHHHccc
Confidence 844321 111336899999999999642 276665 467888887766554 4455555555433333
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhCC-C--------c------cc----cCCCcEEEEEeCCCccHHHHHHHHHHh
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQIG-F--------P------VE----HTPSHIIPIKIGNPALNTKICDMLLKE 434 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~--------~------~~----~~~~~~~~i~l~~~~~~~~~~~~Ll~~ 434 (514)
+ .+...+++..+....+.+.|++.+ + + +. ...++++.|.+.+. .+. ..+++.
T Consensus 247 ~-----tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~---~~~-~~f~~~ 317 (390)
T PRK08064 247 K-----TLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSE---EAV-RQFVSH 317 (390)
T ss_pred C-----cHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCH---HHH-HHHHHh
Confidence 2 344567777888888888888751 1 1 00 12455888888642 233 333345
Q ss_pred CCe---EEecc------------cCCCCC--------CCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 435 KGH---YVQPI------------NYPTVP--------VGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 435 ~GI---~v~~~------------~~~~~~--------~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
.++ .++-| ..+..+ ..++.+|+|++..++++.++.+.++|++
T Consensus 318 l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 318 VKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred CCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 565 33322 111111 1257899999988777777777777765
No 282
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.88 E-value=3.2e-20 Score=188.20 Aligned_cols=309 Identities=19% Similarity=0.186 Sum_probs=210.3
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccc
Q psy16848 32 KGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNH 111 (514)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h 111 (514)
.+-.+++.+.++.--. ....+..+++|+++++++|.++++.++|||.|+.+++.++. +++||+|+++..++
T Consensus 5 ~e~~~~v~~~l~s~~~--------~~~g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~-~~~gdeVi~p~~t~ 75 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWL--------STYGPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALG-LGPGDEVIVPAYTF 75 (363)
T ss_dssp HHHHHHHHHHHHHTCC--------SSSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTT-GGTTSEEEEESSS-
T ss_pred HHHHHHHHHHHHhCCc--------cCCCHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcC-CCcCceEecCCCcc
Confidence 3456677777776211 11147889999999999999999999999999999998875 56999999999999
Q ss_pred hhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 112 ASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
.++..++...|++++.+..
T Consensus 76 ~~~~~ai~~~G~~pv~~Di------------------------------------------------------------- 94 (363)
T PF01041_consen 76 PATASAILWAGAEPVFVDI------------------------------------------------------------- 94 (363)
T ss_dssp THHHHHHHHTT-EEEEE-B-------------------------------------------------------------
T ss_pred hHHHHHHHHhccEEEEEec-------------------------------------------------------------
Confidence 9999887777666554322
Q ss_pred ccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCC
Q psy16848 192 GEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSM 271 (514)
Q Consensus 192 ~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~np 271 (514)
+.+++..+.+.+++..++++++|++.+..
T Consensus 95 -------------------------------------------------~~~~~~id~~~~~~~i~~~t~ai~~~h~~-- 123 (363)
T PF01041_consen 95 -------------------------------------------------DPETLNIDPEALEKAITPKTKAILVVHLF-- 123 (363)
T ss_dssp -------------------------------------------------ETTTSSB-HHHHHHHHHTTEEEEEEE-GG--
T ss_pred -------------------------------------------------cCCcCCcCHHHHHHHhccCccEEEEecCC--
Confidence 12344555555555556778999988875
Q ss_pred CccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCc--ccccC-CCeEEEec-HHHHHH
Q psy16848 272 TGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLG--KAFGN-IGGYIVGT-KNFIDT 347 (514)
Q Consensus 272 tG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~s--K~lg~-~GG~l~~~-~~~~~~ 347 (514)
|...++++|.++|+++|++||+|.+|++|..- .++ .-+. --|+.++||+ |.+.. .||+++.+ +++.++
T Consensus 124 -G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~-~g~----~~G~--~gd~~~fSf~~~K~i~~geGG~v~~~~~~~~~~ 195 (363)
T PF01041_consen 124 -GNPADMDAIRAIARKHGIPLIEDAAQAFGARY-KGR----PVGS--FGDIAIFSFHPTKIITTGEGGAVVTNDPELAER 195 (363)
T ss_dssp -GB---HHHHHHHHHHTT-EEEEE-TTTTT-EE-TTE----ETTS--SSSEEEEESSTTSSS-SSS-EEEEESTHHHHHH
T ss_pred -CCcccHHHHHHHHHHcCCcEEEccccccCcee-CCE----eccC--CCCceEecCCCCCCCcCCCCeeEEecHHHHHHH
Confidence 88889999999999999999999999987641 111 1111 2377777884 88854 45888775 667777
Q ss_pred HHhhcCc---------------eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc--cC
Q psy16848 348 IRSYAAG---------------FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE--HT 409 (514)
Q Consensus 348 l~~~~~~---------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~ 409 (514)
++..... .++...++...++.+...|+.+ ++..++.+++.+++.+.|... ++... ..
T Consensus 196 ~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L-----~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~ 270 (363)
T PF01041_consen 196 ARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRL-----DEIIARRRENAQRYREALAGIPGIKPPPIPD 270 (363)
T ss_dssp HHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTH-----HHHHHHHHHHHHHHHHHHTTGTTEEEEGCGT
T ss_pred hhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHhcCCCcccccccc
Confidence 7654321 2334578888888888888755 346777788888899999887 44221 11
Q ss_pred C---Cc--EEEEEeCCC--ccHHHHHHHHHHhCCeEEecccC-CCC--C---------C---------CCcEEEEEeCCC
Q psy16848 410 P---SH--IIPIKIGNP--ALNTKICDMLLKEKGHYVQPINY-PTV--P---------V---------GEEKIRLAPTPF 461 (514)
Q Consensus 410 ~---~~--~~~i~l~~~--~~~~~~~~~Ll~~~GI~v~~~~~-~~~--~---------~---------~~~~iRl~~~~~ 461 (514)
. .. .+.+.+++. .+.+++.+.|. ++||.+.+... +.. + . ..+.+.+.+...
T Consensus 271 ~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~-~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~ 349 (363)
T PF01041_consen 271 GAERSSYYRFPIRLPDEALADRDELVEALR-ARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPR 349 (363)
T ss_dssp TTEEBCESSEEEEETCCGCSTHHHHHHHHH-HTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTT
T ss_pred cccccccccccccccccccchHHHHHHHHH-HCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCC
Confidence 1 12 456777654 35788999994 99999986552 110 0 0 125888999999
Q ss_pred CCHHHHHHHHHHHH
Q psy16848 462 HTREMIDKFVTDLL 475 (514)
Q Consensus 462 ~t~e~id~~~~~l~ 475 (514)
++++|++++++.|+
T Consensus 350 lt~edv~~I~~~ir 363 (363)
T PF01041_consen 350 LTEEDVDYIAEAIR 363 (363)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHhhccC
Confidence 99999999999875
No 283
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.88 E-value=3.9e-20 Score=201.00 Aligned_cols=218 Identities=17% Similarity=0.223 Sum_probs=157.8
Q ss_pred hHHHHHHhh----ccCCCceEEEEecC-CCCCccccC----HHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCC
Q psy16848 246 NHLTQVLEN----MDVKIPKLVAFETV-HSMTGAICP----LKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDG 315 (514)
Q Consensus 246 ~~l~~~l~~----~~~~~~~~vv~~~~-~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~ 315 (514)
+.+++.|++ ...++++++++|++ ++..|.+.+ +++|+++|++||+++|.||+++ +|++|+.+ ..+..+
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~f--a~e~~g 644 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVES--AWELLG 644 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchh--hHHhcC
Confidence 456666654 22457899999995 888899876 8999999999999999999999 77776543 234455
Q ss_pred CccCceEEEcCCcccccCCC----eEEEecHHHHHHHHhhc----CceEeccCCcHHHHHHHHHHHHHhhhch-HHHHHH
Q psy16848 316 QLHNMDIISGTLGKAFGNIG----GYIVGTKNFIDTIRSYA----AGFIFTTSLPPTVLAGAREAIRILSSQE-GVELRA 386 (514)
Q Consensus 316 ~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~ 386 (514)
+ .|||+ +++|.+++ | |.+++++++.+.+.... ...+++++.+++.++++.++|+.+.++. ..++.+
T Consensus 645 v--~PDIi--~~gKgLtg-G~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~ 719 (817)
T PLN02974 645 C--KPDIA--CYAKLLTG-GLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIP 719 (817)
T ss_pred C--CCCEE--eecccccC-CCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 4 79999 99999976 4 78889999988875211 1133466899999999999999987653 234455
Q ss_pred HHHHHHHHHHHHHH-hC-CCcc---ccCCCcEEEEEeCCCc--------cHHHHHHHHHHhCCeEEecccCCCCCCCCcE
Q psy16848 387 KHQDIVAYLRNELI-QI-GFPV---EHTPSHIIPIKIGNPA--------LNTKICDMLLKEKGHYVQPINYPTVPVGEEK 453 (514)
Q Consensus 387 ~~~~~~~~l~~~L~-~~-g~~~---~~~~~~~~~i~l~~~~--------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~ 453 (514)
+..++.+++.+.|. .+ ..+. +...|.++.+++.+.. ....+.+.++.++||.+++. .+.
T Consensus 720 ~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~--------Gnv 791 (817)
T PLN02974 720 PGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL--------GNV 791 (817)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec--------CCE
Confidence 55566566665552 22 2222 3446678888875321 13456777743899999752 247
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 454 IRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 454 iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
+++.++..++++++++++++|.+.+
T Consensus 792 i~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 792 VYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 8998888999999999999998765
No 284
>KOG0256|consensus
Probab=99.87 E-value=3.1e-20 Score=178.13 Aligned_cols=231 Identities=13% Similarity=0.080 Sum_probs=168.3
Q ss_pred ChhHHHHHHhhcc--CCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCC-CCCCccccCCC-
Q psy16848 244 DVNHLTQVLENMD--VKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGE-HGAGIGERDGQ- 316 (514)
Q Consensus 244 d~~~l~~~l~~~~--~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~-~~~~~~~~~~~- 316 (514)
+.+.+|.++.++. +.+.+.+++.||+||.|.+.+ +..+.+++.++++.+|+||+|+...++. ...++.++...
T Consensus 209 tv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~ 288 (471)
T KOG0256|consen 209 TVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDP 288 (471)
T ss_pred cHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhcc
Confidence 3566666666543 456889999999999999999 7888888999999999999999544433 23333322211
Q ss_pred --ccCceEEEcCCcccccCCC---eEEEecH-HHHHHHHhhcCceEeccCCcHHHHHHHHHHHH--HhhhchHHHHHHHH
Q psy16848 317 --LHNMDIISGTLGKAFGNIG---GYIVGTK-NFIDTIRSYAAGFIFTTSLPPTVLAGAREAIR--ILSSQEGVELRAKH 388 (514)
Q Consensus 317 --~~~~di~~~S~sK~lg~~G---G~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~ 388 (514)
+.+..-++.|+||-+|.+| |+++..+ +++....+..... ..|+..+..+...|. .+.+..+++...++
T Consensus 289 ~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~----~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl 364 (471)
T KOG0256|consen 289 HLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFG----LVSSQTQYLLASLLSDEEFTREYLRENNKRL 364 (471)
T ss_pred ccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhcc----CCcHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 2345567779999999999 9998765 5555555544322 456666665555554 34456778899999
Q ss_pred HHHHHHHHHHHHhCCCccccCCCc-EEEEEeCC----C--ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCC
Q psy16848 389 QDIVAYLRNELIQIGFPVEHTPSH-IIPIKIGN----P--ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPF 461 (514)
Q Consensus 389 ~~~~~~l~~~L~~~g~~~~~~~~~-~~~i~l~~----~--~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~ 461 (514)
+.+..++.+.|+++|+++..+.++ +.|+.+.. . ....++.++++.+-++.++||..|.+.. ++|+|++|. .
T Consensus 365 ~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~E-pGWFRvcFA-n 442 (471)
T KOG0256|consen 365 RIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHE-PGWFRVCFA-N 442 (471)
T ss_pred HHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecC-CCeEEEEec-c
Confidence 999999999999999999877655 56666532 1 2234677788755599999999766543 789999998 5
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy16848 462 HTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 462 ~t~e~id~~~~~l~~~l~~ 480 (514)
+.++.++-++++++.++.+
T Consensus 443 ~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 443 MSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 6666677799999998874
No 285
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.87 E-value=5.2e-20 Score=188.48 Aligned_cols=332 Identities=13% Similarity=0.082 Sum_probs=225.8
Q ss_pred ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC----cEEE--Eeccccccccchhhcccc------
Q psy16848 31 PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE----AGLV--FTSCYVANDSTLFTLGKM------ 98 (514)
Q Consensus 31 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~----~~i~--~~sGt~a~~~~l~~l~~~------ 98 (514)
+|++.+.+.+.+.....++.+. ....++.+++.+++++++|.+ ..++ +++||+||..++.+....
T Consensus 54 ~p~~~~~~~~~l~~~~~np~s~---~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 54 EPEARKLMDETINKNMIDKDEY---PQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CHHHHHHHHHHHhcCCCCcccC---ccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888888887432222221 123478889999999999976 3444 577899998888654310
Q ss_pred C-----CCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhh
Q psy16848 99 I-----PGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVS 173 (514)
Q Consensus 99 ~-----~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (514)
. +..+|++++.+|.++..+++..|.++..++.+.
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~----------------------------------------- 169 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP----------------------------------------- 169 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-----------------------------------------
Confidence 0 124799999999999988877776544332210
Q ss_pred hhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHh
Q psy16848 174 HQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLE 253 (514)
Q Consensus 174 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~ 253 (514)
+.+ .-|.+.+++.++
T Consensus 170 ---------------------~~~--------------------------------------------~vd~~~L~~~i~ 184 (431)
T TIGR01788 170 ---------------------GRY--------------------------------------------VIDPEQVVEAVD 184 (431)
T ss_pred ---------------------Cce--------------------------------------------eeCHHHHHHHHh
Confidence 000 004455555554
Q ss_pred hccCCCceEEEEecCCCCCccccCHHHHHHHHHHc------CCEEEEeccccccc----cCCCCCCccccCCCccCceEE
Q psy16848 254 NMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQH------GALTFVDEVHAVGL----YGEHGAGIGERDGQLHNMDII 323 (514)
Q Consensus 254 ~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~------gv~li~Dea~~~g~----~g~~~~~~~~~~~~~~~~di~ 323 (514)
+++.+|++..++|.+|.+.|+++|.++|+++ |+++++|.+|+.+. .++.. ..+. ..++|.+
T Consensus 185 ----~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~----~~~~-~~~~DSi 255 (431)
T TIGR01788 185 ----ENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLE----WDFR-LPRVKSI 255 (431)
T ss_pred ----hCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCch----hhcC-CCCceEE
Confidence 4478999999999999999999999999999 99999999999333 12111 0111 3478999
Q ss_pred EcCCcccc-cCCC-eEEEecHH--HHHHHHhh---cC----ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHH
Q psy16848 324 SGTLGKAF-GNIG-GYIVGTKN--FIDTIRSY---AA----GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIV 392 (514)
Q Consensus 324 ~~S~sK~l-g~~G-G~l~~~~~--~~~~l~~~---~~----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 392 (514)
+.|.||++ ++.| |+++.++. +.+.+... .. ..+...+-+..........|..+...++.++.++..++.
T Consensus 256 s~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la 335 (431)
T TIGR01788 256 NVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVA 335 (431)
T ss_pred EECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Confidence 99999987 8888 88876643 32333211 00 011111112222333444555555678889999999999
Q ss_pred HHHHHHHHhC-CCccccC--CCcEEEEEeCC----CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHH
Q psy16848 393 AYLRNELIQI-GFPVEHT--PSHIIPIKIGN----PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTRE 465 (514)
Q Consensus 393 ~~l~~~L~~~-g~~~~~~--~~~~~~i~l~~----~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e 465 (514)
+++.+.|++. ++++..+ ..+++.|++.. ..+..++.+.| .++|+.+.....+..-.+..++|+++....+++
T Consensus 336 ~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L-~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~ 414 (431)
T TIGR01788 336 RYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRL-RERGWIVPAYTLPKNAEDIVVMRIVVREGFSRD 414 (431)
T ss_pred HHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHH-HHCCCcccCCCCCCccCCeEEEEEEecCCCCHH
Confidence 9999999998 5776643 56688888763 24567888888 589998654444333345678999998788999
Q ss_pred HHHHHHHHHHHHHHHc
Q psy16848 466 MIDKFVTDLLAVWKSL 481 (514)
Q Consensus 466 ~id~~~~~l~~~l~~~ 481 (514)
.++++++.|++++.++
T Consensus 415 ~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 415 LAELLIEDIEAALAYL 430 (431)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999988764
No 286
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=1.7e-20 Score=189.88 Aligned_cols=242 Identities=14% Similarity=0.094 Sum_probs=173.7
Q ss_pred hHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHH
Q psy16848 60 LFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQV 139 (514)
Q Consensus 60 ~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 139 (514)
+...+++++++++.+.+.+++++||++|+..++.++.+ +||+|++.++.|......+.
T Consensus 61 pt~~~Le~~iA~le~~~~~~~~~sG~~Ai~~~l~all~--~GD~Vvv~~~~Y~~t~~l~~-------------------- 118 (394)
T PRK09028 61 PTHFAFQAAIVELEGGAGTALYPSGAAAISNALLSFLK--AGDHLLMVDSCYEPTRDLCD-------------------- 118 (394)
T ss_pred chHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC--CCCEEEEECCCcHHHHHHHH--------------------
Confidence 44679999999999888899999999999988888866 99999999988877653211
Q ss_pred HHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCc
Q psy16848 140 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPE 219 (514)
Q Consensus 140 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~ 219 (514)
T Consensus 119 -------------------------------------------------------------------------------- 118 (394)
T PRK09028 119 -------------------------------------------------------------------------------- 118 (394)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecccc
Q psy16848 220 VAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHA 299 (514)
Q Consensus 220 v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~ 299 (514)
..+...|.++.+++..+.+.+++. .+++|++|++++|+||+|.+.++++|.++|+++|+++++|++|+
T Consensus 119 --------~~l~~~Gi~v~~v~~~~~e~l~~~----l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a 186 (394)
T PRK09028 119 --------KILKGFGIETTYYDPMIGEGIREL----IRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWA 186 (394)
T ss_pred --------HhhhhcceEEEEECCCCHHHHHHh----cCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 011123444555544343333333 35679999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHH
Q psy16848 300 VGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRI 375 (514)
Q Consensus 300 ~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~ 375 (514)
.+.. ...+..++|+++.|.+|++++.| |+++.++++.+.+....... +..+++..+..+...|+.
T Consensus 187 ~p~~---------~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~--G~~~~p~~a~l~~rgl~T 255 (394)
T PRK09028 187 SPIN---------SRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLM--GQCTSPDDVYLAMRGLRT 255 (394)
T ss_pred cccc---------CCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhc--CCCCCHHHHHHHHcccCc
Confidence 5432 11224589999999999998764 87777777777665443332 446778777766666653
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHhC-CCc-cc-----------------cCCCcEEEEEeCCC--ccHHHHHHHH
Q psy16848 376 LSSQEGVELRAKHQDIVAYLRNELIQI-GFP-VE-----------------HTPSHIIPIKIGNP--ALNTKICDML 431 (514)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-----------------~~~~~~~~i~l~~~--~~~~~~~~~L 431 (514)
+.-++++..++...+.+.|++. .+. +. ...++++.|.+.+. .....|.+.|
T Consensus 256 -----L~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l 327 (394)
T PRK09028 256 -----LGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGM 327 (394)
T ss_pred -----HHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhC
Confidence 3347788888999999999886 221 10 11356899998632 2334555555
No 287
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.87 E-value=1.9e-20 Score=190.17 Aligned_cols=286 Identities=18% Similarity=0.170 Sum_probs=194.9
Q ss_pred hHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHH
Q psy16848 60 LFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQV 139 (514)
Q Consensus 60 ~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 139 (514)
+..+++++++++++|.+++++++||+.|+..++. +.+ +||+|+++++.|.++...++
T Consensus 47 p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~-ll~--~Gd~Vl~~~~~y~~~~~~~~-------------------- 103 (378)
T TIGR01329 47 PTRTALESLLAKLDKADRAFAFSSGMAALDVITR-LLN--NGDEIIAGDDLYGGTDRLLT-------------------- 103 (378)
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhC--CCCEEEEcCCCchHHHHHHH--------------------
Confidence 4578999999999999999999999988766554 544 99999999988877653211
Q ss_pred HHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCc
Q psy16848 140 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPE 219 (514)
Q Consensus 140 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~ 219 (514)
T Consensus 104 -------------------------------------------------------------------------------- 103 (378)
T TIGR01329 104 -------------------------------------------------------------------------------- 103 (378)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecccc
Q psy16848 220 VAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHA 299 (514)
Q Consensus 220 v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~ 299 (514)
..+...|.+++.++..|.+.+++.+ +++++++++++++||+|.+.++++|.++|+++|+++|+|+++.
T Consensus 104 --------~~~~~~G~~v~~vd~~d~~~le~~i----~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~ 171 (378)
T TIGR01329 104 --------QVVPRSGVVVVHVDTTDLDKVKAAL----GPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMM 171 (378)
T ss_pred --------HHHHHcCcEEEEeCCCCHHHHHHhc----CcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCc
Confidence 1112335556666655555555554 3568999999999999999999999999999999999999986
Q ss_pred ccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHH
Q psy16848 300 VGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIR 374 (514)
Q Consensus 300 ~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~ 374 (514)
.+... .....+.|++++|++|++++. ||+++. ++.+.+++....... +...++..+..+...++
T Consensus 172 ~~~~~---------~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~--G~~~~~~~a~l~~~~l~ 240 (378)
T TIGR01329 172 SPLLC---------NPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNST--GSGLAPFDCWLLLRGIK 240 (378)
T ss_pred ccccC---------ChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhc--CCcCCHHHHHHHHccCC
Confidence 44321 111236899999999999753 488876 455656666544322 33455655544333332
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHHHhC-CC--------cc------c----cCCCcEEEEEeCCCccHHHHHHHHHHhC
Q psy16848 375 ILSSQEGVELRAKHQDIVAYLRNELIQI-GF--------PV------E----HTPSHIIPIKIGNPALNTKICDMLLKEK 435 (514)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~--------~~------~----~~~~~~~~i~l~~~~~~~~~~~~Ll~~~ 435 (514)
.+..+.++..++...+.+.|++. .+ +- . ...++++.|.+.+.....++++.| +..
T Consensus 241 -----tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L-~~~ 314 (378)
T TIGR01329 241 -----TLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEAT-KLF 314 (378)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhC-cCc
Confidence 34556777778888888888765 11 10 0 113468889985433367888888 577
Q ss_pred CeEEecccCCCC------------C--------CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 436 GHYVQPINYPTV------------P--------VGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 436 GI~v~~~~~~~~------------~--------~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
++.++-|..... + ..++.+|+|++. |+.+.+++-|++.+++.
T Consensus 315 ~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 315 SITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFVTA 376 (378)
T ss_pred ccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhc
Confidence 777764442110 0 125799999994 45666666666666543
No 288
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=1.9e-20 Score=190.97 Aligned_cols=286 Identities=13% Similarity=0.021 Sum_probs=190.5
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+..++++++++++.|.+++++++||++|+..++.++.+ +||+|+++.+.|......+.
T Consensus 64 ~pt~~~Le~~lA~l~g~~~~l~~~sgt~Ai~~~l~al~~--~GD~Vl~~~~~y~~~~~~~~------------------- 122 (394)
T PRK07050 64 TPTSLALAQRLAEIEGGRHALLQPSGLAAISLVYFGLVK--AGDDVLIPDNAYGPNRDHGE------------------- 122 (394)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeccHHHHHHHHHHHHhC--CCCEEEEecCCcccHHHHHH-------------------
Confidence 355689999999999999999999999999999988866 99999999999987653210
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 123 -------------------------------------------------------------------------------- 122 (394)
T PRK07050 123 -------------------------------------------------------------------------------- 122 (394)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
..+...|+++.+++..+.+.+ ++..++++++|++++|+||+|...++++|.++|+++|+++|+|++|
T Consensus 123 ---------~~~~~~Gi~v~~vd~~~~~~l----~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~ 189 (394)
T PRK07050 123 ---------WLARDFGITVRFYDPLIGAGI----ADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTY 189 (394)
T ss_pred ---------HHHHhcCeEEEEECCCCHHHH----HHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCc
Confidence 111223445555553333333 3334567899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
..+.. ..+...+.|+++.|++|.+++. ||++++ ++++.+.++..+... +...++..+..+...+
T Consensus 190 a~~~~---------~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~--G~~~~~~~a~l~lr~l 258 (394)
T PRK07050 190 SAGLA---------FKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRL--GIGVSADDCSLVLRGL 258 (394)
T ss_pred ccccc---------cCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhc--CCCCCHHHHHHHHcCC
Confidence 86543 1222347899999999999752 366654 678888776554433 3355665554443333
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc------------------cCCCcEEEEEeCCC---ccHHHHHHHH
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE------------------HTPSHIIPIKIGNP---ALNTKICDML 431 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~------------------~~~~~~~~i~l~~~---~~~~~~~~~L 431 (514)
+ .+..+.++..++...+.+.|++. ++..+ ...++++.+.+... ....++.+.|
T Consensus 259 ~-----tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l 333 (394)
T PRK07050 259 P-----SLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEAL 333 (394)
T ss_pred C-----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcC
Confidence 2 33346667777777888888876 22110 11245777887532 4466777777
Q ss_pred HHhCCeEEecccCCC--------------CCCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q psy16848 432 LKEKGHYVQPINYPT--------------VPVGEEKIRLAPTPFHTREMIDKFVTDLL 475 (514)
Q Consensus 432 l~~~GI~v~~~~~~~--------------~~~~~~~iRl~~~~~~t~e~id~~~~~l~ 475 (514)
+..++.++-|.... .+...+.||+|++....++-++.+-++|.
T Consensus 334 -~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGlE~~~dl~~dl~~al~ 390 (394)
T PRK07050 334 -ELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGLEDEADLIADLEQALE 390 (394)
T ss_pred -CCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCcCCHHHHHHHHHHHHH
Confidence 46665544222111 01123689999996543333444444443
No 289
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=2.1e-20 Score=190.52 Aligned_cols=243 Identities=16% Similarity=0.169 Sum_probs=170.9
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...+++++++++.|.+.+++++||++|+..++.++.. +||+|+++.+.|.++...+..
T Consensus 60 ~p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~~l~all~--~Gd~Vl~~~~~y~~t~~~~~~------------------ 119 (388)
T PRK07811 60 NPTRTALEEQLAALEGGAYGRAFSSGMAATDCLLRAVLR--PGDHIVIPNDAYGGTFRLIDK------------------ 119 (388)
T ss_pred CccHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHHhC--CCCEEEEcCCCchHHHHHHHH------------------
Confidence 356789999999999999999999999999999988866 999999999999876533211
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 120 -------------------------------------------------------------------------------- 119 (388)
T PRK07811 120 -------------------------------------------------------------------------------- 119 (388)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
.+...|.++..++..|.+.+++.+. +++++|++++|+||+|...++++|.++|+++|+++|+|++|
T Consensus 120 ----------~~~~~gi~~~~~d~~d~e~l~~~i~----~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~ 185 (388)
T PRK07811 120 ----------VFTRWGVEYTPVDLSDLDAVRAAIT----PRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTF 185 (388)
T ss_pred ----------hCcCCCeEEEEeCCCCHHHHHHhcC----cCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCC
Confidence 0011234455555545555555553 46899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
+.+.... + ...+.|++++|++|++++. ||+++. ++++.+.+....... +...++..+..+...|
T Consensus 186 a~~~~~~------p---~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~--g~~~s~~~a~l~~~~L 254 (388)
T PRK07811 186 ASPYLQQ------P---LALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGA--GAVPGPFDAYLTLRGL 254 (388)
T ss_pred CccccCC------c---hhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhc--CCCCCHHHHHHHHhcc
Confidence 8654311 1 1236799999999999874 487776 466767665444332 2345565555555544
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc------------------cCCCcEEEEEeCCC-ccHHHHHHHH
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE------------------HTPSHIIPIKIGNP-ALNTKICDML 431 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~------------------~~~~~~~~i~l~~~-~~~~~~~~~L 431 (514)
+. +..++++..++...+.+.|++. ++..+ ...|+++.|.+... .....|.+.|
T Consensus 255 ~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l 327 (388)
T PRK07811 255 KT-----LAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCART 327 (388)
T ss_pred Cc-----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhC
Confidence 43 3456677788888888888876 32210 11355899998632 2344555554
No 290
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.87 E-value=9.5e-20 Score=186.23 Aligned_cols=317 Identities=18% Similarity=0.173 Sum_probs=211.9
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccc
Q psy16848 32 KGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNH 111 (514)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h 111 (514)
++-.+++.+.+.... +. ..+...++++.+++++|.+++++++|||+|+..++.++. .++||.|+++.++|
T Consensus 10 ~~~~~~v~~~~~~~~-------~~--~g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~-~~~Gd~Viv~~~~~ 79 (380)
T TIGR03588 10 QDDIDAVVEVLKSDF-------LT--QGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALG-VGPGDRVWTTPITF 79 (380)
T ss_pred HHHHHHHHHHHhcCC-------cc--CChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcC-CCCCCEEEeCCcch
Confidence 344666777666411 11 135578999999999999999999999999999988872 33999999999999
Q ss_pred hhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 112 ASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
.+...++...|++++.++.+. +.
T Consensus 80 ~~~~~~~~~~G~~~~~~~~~~-~~-------------------------------------------------------- 102 (380)
T TIGR03588 80 VATANCALYCGAKVDFVDIDP-DT-------------------------------------------------------- 102 (380)
T ss_pred HHHHHHHHHcCCEEEEEecCC-Cc--------------------------------------------------------
Confidence 998877777777766543210 00
Q ss_pred ccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCC
Q psy16848 192 GEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSM 271 (514)
Q Consensus 192 ~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~np 271 (514)
...|.+.+++.+.+...+++++|++.+ +
T Consensus 103 -------------------------------------------------~~~d~~~l~~~i~~~~~~~t~~v~~~~---~ 130 (380)
T TIGR03588 103 -------------------------------------------------GNIDEDALEKKLAAAKGKLPKAIVPVD---F 130 (380)
T ss_pred -------------------------------------------------CCcCHHHHHHHhhcccCCCceEEEEeC---C
Confidence 001445555555433225678887544 5
Q ss_pred CccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCc--ccccC-CCeEEEe-cHHHHHH
Q psy16848 272 TGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLG--KAFGN-IGGYIVG-TKNFIDT 347 (514)
Q Consensus 272 tG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~s--K~lg~-~GG~l~~-~~~~~~~ 347 (514)
+|...++++|.++|++||+++|+|++|++|.. ..+..+. . ....|+.++|+| |+++. .||+++. ++++.+.
T Consensus 131 ~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~-~~~~~~g-~---~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~~~~~~ 205 (380)
T TIGR03588 131 AGKSVDMQAIAALAKKHGLKIIEDASHALGAE-YGGKPVG-N---CRYADATVFSFHPVKIITTAEGGAVTTNDEELAER 205 (380)
T ss_pred CCccCCHHHHHHHHHHcCCEEEEECCCcccCc-cCCEeCC-C---ccccceEEEecCCCCcccccCceEEEECCHHHHHH
Confidence 79999999999999999999999999997753 1111111 0 012388888987 88854 4576665 5677776
Q ss_pred HHhhcCc-----------------------eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-C
Q psy16848 348 IRSYAAG-----------------------FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-G 403 (514)
Q Consensus 348 l~~~~~~-----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 403 (514)
++..... .+++..++....+.+...|+.+ +++.++.+++.+++.+.|... +
T Consensus 206 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l-----~~~~~~r~~~~~~~~~~L~~~~~ 280 (380)
T TIGR03588 206 MRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL-----DRFVAKRREIAARYDRLLKDLPY 280 (380)
T ss_pred HHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHhcCCCC
Confidence 6532110 1122345666666666666543 457788889999999999887 3
Q ss_pred CccccC-C----Cc-EEEEEeCC--CccHHHHHHHHHHhCCeEEecccCCCC---------CC---------CCcEEEEE
Q psy16848 404 FPVEHT-P----SH-IIPIKIGN--PALNTKICDMLLKEKGHYVQPINYPTV---------PV---------GEEKIRLA 457 (514)
Q Consensus 404 ~~~~~~-~----~~-~~~i~l~~--~~~~~~~~~~Ll~~~GI~v~~~~~~~~---------~~---------~~~~iRl~ 457 (514)
+.+..+ . .. ++.+.+.. ....+++.+.| +++||.++....+.. .. ..+.++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP 359 (380)
T TIGR03588 281 FTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLP 359 (380)
T ss_pred ccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcC
Confidence 433222 1 11 33444542 24578899999 599999874432210 00 12689999
Q ss_pred eCCCCCHHHHHHHHHHHHHHH
Q psy16848 458 PTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 458 ~~~~~t~e~id~~~~~l~~~l 478 (514)
++...|++|++++++.+++++
T Consensus 360 ~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 360 LHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CCCCCCHHHHHHHHHHHHHhC
Confidence 999999999999999998864
No 291
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.87 E-value=6.4e-20 Score=191.99 Aligned_cols=331 Identities=15% Similarity=0.135 Sum_probs=212.9
Q ss_pred CChhHHHHHHHHHHHhCCCCCCc-CcccCcchHHHHHHHHHHhHcCCCcEEEE-eccccccccchhhc--cccCCCc---
Q psy16848 30 VPKGGRKCLGEALEKFGTGAGGT-RNISGNSLFHEKLEEDVAKLHQKEAGLVF-TSCYVANDSTLFTL--GKMIPGL--- 102 (514)
Q Consensus 30 ~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~i~~-~sGt~a~~~~l~~l--~~~~~gd--- 102 (514)
-+|.+.+++.+.-...+..+-.+ ....|..+...++++++++++|.+.+.+. ++|+.+...++..+ ....+||
T Consensus 82 ~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~ 161 (481)
T PRK04366 82 YNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKR 161 (481)
T ss_pred CCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCC
Confidence 36788888877532222211111 24557778899999999999998876555 56666554433211 1123565
Q ss_pred -eEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEE
Q psy16848 103 -HYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTF 181 (514)
Q Consensus 103 -~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (514)
.|+++.+.|++....++..|.+++.++.+
T Consensus 162 ~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~-------------------------------------------------- 191 (481)
T PRK04366 162 TEVIVPDSAHGTNPASAAMAGFKVVEIPSN-------------------------------------------------- 191 (481)
T ss_pred CEEEEcCCccHhHHHHHHHcCCEEEEeecC--------------------------------------------------
Confidence 99999999999887766666655543221
Q ss_pred eeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCce
Q psy16848 182 VDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPK 261 (514)
Q Consensus 182 ~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~ 261 (514)
.++..+.+.+++..+++++
T Consensus 192 -------------------------------------------------------------~~~~~D~e~L~~~i~~~t~ 210 (481)
T PRK04366 192 -------------------------------------------------------------EDGLVDLEALKAAVGEDTA 210 (481)
T ss_pred -------------------------------------------------------------CCCCcCHHHHHhhcccCCe
Confidence 1122222333333345688
Q ss_pred EEEEecCCCCCccc-cCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC------C
Q psy16848 262 LVAFETVHSMTGAI-CPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN------I 334 (514)
Q Consensus 262 ~vv~~~~~nptG~~-~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~------~ 334 (514)
++++++|+ ++|.. .++++|.++|+++|+++++|+++..+..+.. +.. ..++|++++|.||+++. +
T Consensus 211 ~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~-----~~~--~~GaD~~~~~~hK~l~~P~g~Ggp 282 (481)
T PRK04366 211 ALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKA-----RPG--DMGFDVVHLNLHKTFSTPHGGGGP 282 (481)
T ss_pred EEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccC-----Ccc--ccCCCEEEEechhhcCCCCCCCCC
Confidence 99999876 99987 4799999999999999999999985544311 111 34789999999999863 2
Q ss_pred C-eEEEecHHHHHHHHhhc-----CceEec------------cCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q psy16848 335 G-GYIVGTKNFIDTIRSYA-----AGFIFT------------TSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLR 396 (514)
Q Consensus 335 G-G~l~~~~~~~~~l~~~~-----~~~~~~------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 396 (514)
| |++++++++.+.+.... ..+.++ ++.+...+.++...+..+..+++.++.++...+.+++.
T Consensus 283 ~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~ 362 (481)
T PRK04366 283 GSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLK 362 (481)
T ss_pred CeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 78888888777663110 011111 11122334444455555555666777788888999999
Q ss_pred HHHHhC-CCccccCCCcEEEEEeC----CCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHH
Q psy16848 397 NELIQI-GFPVEHTPSHIIPIKIG----NPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFV 471 (514)
Q Consensus 397 ~~L~~~-g~~~~~~~~~~~~i~l~----~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~ 471 (514)
+.|+++ .+.+..+...-+.+..+ .+.+..++.+.|. ++||.+....++.. ....+|++++..+|++|+|+++
T Consensus 363 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~-~~Gi~~~~~~~p~~--~~~~l~is~~e~~t~edid~l~ 439 (481)
T PRK04366 363 ARLKDIYDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLL-DYGFHPPTIYFPLI--VPEALMIEPTETESKETLDAFI 439 (481)
T ss_pred HHhHhhCcccCCCCeeEEEEEECccccccCCCHHHHHHHHH-HCCccCCccccccc--cCCeEEEcccCCCCHHHHHHHH
Confidence 999986 33221111112223221 1235788999995 99999763333221 2468999999999999999999
Q ss_pred HHHHHHHHHcC
Q psy16848 472 TDLLAVWKSLD 482 (514)
Q Consensus 472 ~~l~~~l~~~~ 482 (514)
+.|+++.++..
T Consensus 440 ~~l~~i~~~~~ 450 (481)
T PRK04366 440 AAMKQIAEEAK 450 (481)
T ss_pred HHHHHHHHHHH
Confidence 99999987764
No 292
>PRK07049 methionine gamma-lyase; Validated
Probab=99.87 E-value=4.7e-20 Score=189.79 Aligned_cols=217 Identities=17% Similarity=0.152 Sum_probs=162.0
Q ss_pred hHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHH
Q psy16848 60 LFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQV 139 (514)
Q Consensus 60 ~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 139 (514)
+....+++.++++.|.+.+++++||++|+..++.+++. +||+|+++.+.|......+.
T Consensus 83 Pt~~~Le~~lA~leg~~~~iv~~sG~~Ai~~~l~al~~--~Gd~Vv~~~p~Y~~~~~~~~-------------------- 140 (427)
T PRK07049 83 PNSEIVEDRLAVYEGAESAALFSSGMSAIATTLLAFVR--PGDVILHSQPLYGGTETLLA-------------------- 140 (427)
T ss_pred cCHHHHHHHHHHHhCCCcEEEEccHHHHHHHHHHHHhC--CCCEEEEcCCCcccHHHHHH--------------------
Confidence 45689999999999999999999999998888888876 99999999998877653321
Q ss_pred HHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCc
Q psy16848 140 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPE 219 (514)
Q Consensus 140 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~ 219 (514)
T Consensus 141 -------------------------------------------------------------------------------- 140 (427)
T PRK07049 141 -------------------------------------------------------------------------------- 140 (427)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeecchHHHHhhCCCCEEEec-CCChhHHHHHHhhcc-CCCceEEEEecCCCCCccccCHHHHHHHHHH------cCCE
Q psy16848 220 VAIHASMIQGIRNSSAPKIIYR-HNDVNHLTQVLENMD-VKIPKLVAFETVHSMTGAICPLKELCEVSHQ------HGAL 291 (514)
Q Consensus 220 v~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~l~~~~-~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~------~gv~ 291 (514)
..+...|.+++.++ ..|.+.+++.+.+.. .+++++|++++|+||||.++++++|.++++. ++++
T Consensus 141 --------~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~ 212 (427)
T PRK07049 141 --------KTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPI 212 (427)
T ss_pred --------HHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCE
Confidence 01112233433333 235555666665432 3468999999999999999999999999988 8999
Q ss_pred EEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC-CC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHH
Q psy16848 292 TFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN-IG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLA 367 (514)
Q Consensus 292 li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~-~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 367 (514)
+|+|++|..... ...+..++|+++.|+||.+|+ +| |++++++++++.+......+ +..+++..+.
T Consensus 213 vvvDety~~~~~---------~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~--g~~ls~~~a~ 281 (427)
T PRK07049 213 IACDNTLLGPVF---------QKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAI--GTQLDPHSCW 281 (427)
T ss_pred EEEECCcccccc---------CCccccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhc--CCCCCHHHHH
Confidence 999999862211 011123679999999999985 44 99999999988887765554 4567888888
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 368 GAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 368 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
++...++. +...+++..++++.+.+.|++.
T Consensus 282 l~~r~L~t-----l~~R~~~~~~~a~~la~~L~~~ 311 (427)
T PRK07049 282 MLGRSLET-----LVLRMERANRNARAVAEFLRDH 311 (427)
T ss_pred HHHcCCCh-----HHHHHHHHHHHHHHHHHHHHhC
Confidence 77776653 3345667788899999999886
No 293
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.87 E-value=1.9e-19 Score=183.45 Aligned_cols=309 Identities=13% Similarity=0.152 Sum_probs=203.9
Q ss_pred HHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhh
Q psy16848 35 RKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASM 114 (514)
Q Consensus 35 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~ 114 (514)
.+++.+.+.. +. .+|..+..+++++++++++|.+++++++||++|+..++.++. .++||+|+++.++|.++
T Consensus 14 ~~~~~~~l~~-~~-------~~g~~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~-~~~Gd~Viv~~~t~~~~ 84 (375)
T PRK11706 14 LDYIQQAMSS-GK-------LCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLD-IQPGDEVIMPSYTFVST 84 (375)
T ss_pred HHHHHHHHHc-CC-------ccCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhC-CCCCCEEEECCCCcHHH
Confidence 5556666654 11 224457889999999999999999999999999877766553 34999999999999999
Q ss_pred hhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccC
Q psy16848 115 IQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEH 194 (514)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 194 (514)
..+++..|++++.++.+. +. |
T Consensus 85 ~~~~~~~G~~~v~~d~d~-~~---------------------~------------------------------------- 105 (375)
T PRK11706 85 ANAFVLRGAKIVFVDIRP-DT---------------------M------------------------------------- 105 (375)
T ss_pred HHHHHHcCCEEEEEecCC-Cc---------------------C-------------------------------------
Confidence 988887777766543210 00 0
Q ss_pred CCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCcc
Q psy16848 195 GAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGA 274 (514)
Q Consensus 195 ~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~ 274 (514)
..|.+.+++.+ ++++++|++.+ ++|.
T Consensus 106 -----------------------------------------------~~d~~~le~~i----~~~tk~i~~~~---~~G~ 131 (375)
T PRK11706 106 -----------------------------------------------NIDETLIEAAI----TPKTRAIVPVH---YAGV 131 (375)
T ss_pred -----------------------------------------------CcCHHHHHHhc----CCCCeEEEEeC---CCCC
Confidence 01333333333 44678888654 6899
Q ss_pred ccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCc--ccccC-CCe-EEEecHHHHHHHHh
Q psy16848 275 ICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLG--KAFGN-IGG-YIVGTKNFIDTIRS 350 (514)
Q Consensus 275 ~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~s--K~lg~-~GG-~l~~~~~~~~~l~~ 350 (514)
..++++|.++|+++|+++|+|++|++|... .+... +. -.|+.++||+ |.+++ .|| +++.++++.++++.
T Consensus 132 ~~~~~~i~~la~~~~i~vIeD~a~a~g~~~-~~~~~----g~--~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~ 204 (375)
T PRK11706 132 ACEMDTIMALAKKHNLFVVEDAAQGVMSTY-KGRAL----GT--IGHIGCFSFHETKNYTAGEGGALLINDPALIERAEI 204 (375)
T ss_pred ccCHHHHHHHHHHcCCEEEEECcccccccc-CCeee----ec--CcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHH
Confidence 999999999999999999999999977631 11111 11 1366666777 99965 235 44556788776654
Q ss_pred hcCc-------------------eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCC----Cccc
Q psy16848 351 YAAG-------------------FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIG----FPVE 407 (514)
Q Consensus 351 ~~~~-------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~ 407 (514)
.... .+++..++...++.+...++.+ ++..++.+++.+++.+.|.... +.+.
T Consensus 205 ~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l-----~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~ 279 (375)
T PRK11706 205 IREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAA-----DRINQRRLALWQRYYDALAPLAEAGRIELP 279 (375)
T ss_pred HHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHhcCCCcCCeeecC
Confidence 4311 1122334556666666666654 3466666777777777776652 2221
Q ss_pred --cCC----CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCC---------------CCC----CCcEEEEEeCCCC
Q psy16848 408 --HTP----SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPT---------------VPV----GEEKIRLAPTPFH 462 (514)
Q Consensus 408 --~~~----~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~---------------~~~----~~~~iRl~~~~~~ 462 (514)
.+. ..++++.+++..+..++.+.|. ++||.++....+. .+. ..+.+.+.+....
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~-~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l 358 (375)
T PRK11706 280 SIPDDCKHNAHMFYIKLRDLEDRSALINFLK-EAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNL 358 (375)
T ss_pred CCCCCCceeeEEEEEEECCcCCHHHHHHHHH-HCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCC
Confidence 111 2255666765556889999995 9999976322110 000 1356778888889
Q ss_pred CHHHHHHHHHHHHHHH
Q psy16848 463 TREMIDKFVTDLLAVW 478 (514)
Q Consensus 463 t~e~id~~~~~l~~~l 478 (514)
+++|++.+++.+++++
T Consensus 359 ~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 359 TDVEQRTVIDTILEFF 374 (375)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998864
No 294
>PLN02509 cystathionine beta-lyase
Probab=99.86 E-value=4.3e-20 Score=190.17 Aligned_cols=284 Identities=17% Similarity=0.177 Sum_probs=188.4
Q ss_pred hHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHH
Q psy16848 60 LFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQV 139 (514)
Q Consensus 60 ~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 139 (514)
+..++++++++++.+.+.+++++||+.|+.+ +..+.+ +||+|+++.+.|.++...+.
T Consensus 133 pt~~aLE~~lA~leg~e~ai~~~SG~aAi~~-il~ll~--~GD~VI~~~~~y~~t~~ll~-------------------- 189 (464)
T PLN02509 133 PTRDALESLLAKLDKADRAFCFTSGMAALSA-VTHLIK--NGEEIVAGDDVYGGSDRLLS-------------------- 189 (464)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCcHHHHHHH-HHHHhC--CCCEEEEcCCchhhHHHHHH--------------------
Confidence 5789999999999999999999999877644 335544 99999999998877642211
Q ss_pred HHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCc
Q psy16848 140 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPE 219 (514)
Q Consensus 140 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~ 219 (514)
T Consensus 190 -------------------------------------------------------------------------------- 189 (464)
T PLN02509 190 -------------------------------------------------------------------------------- 189 (464)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecccc
Q psy16848 220 VAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHA 299 (514)
Q Consensus 220 v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~ 299 (514)
..+...|++++.++..|.+.+++.+ ++++++|++++|+||+|.+.++++|.++|+++|+++|+|++++
T Consensus 190 --------~~l~~~G~~v~~vd~~d~e~l~~ai----~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a 257 (464)
T PLN02509 190 --------QVVPRSGVVVKRVNTTNLDEVAAAI----GPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIM 257 (464)
T ss_pred --------HHHHHCCeEEEEeCCCCHHHHHHhC----CcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 1122334555555554554444443 4568999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEec-HHHHHHHHhhcCceEeccCCcHHHHHHHHHHHH
Q psy16848 300 VGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVGT-KNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIR 374 (514)
Q Consensus 300 ~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~ 374 (514)
.+..+.. ...+.|++++|++|++++. ||+++++ +.+.+.+...+... +...++..++.+...|+
T Consensus 258 ~~~~~~p---------l~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~--g~~l~p~~A~l~lr~L~ 326 (464)
T PLN02509 258 SPVLSRP---------LELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSE--GSGLAPFDCWLCLRGIK 326 (464)
T ss_pred ccccCCh---------hhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhc--CCCcCHHHHHHHHhhhh
Confidence 6554211 1237899999999999763 4777764 44555444332222 33467788777777777
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHHHhC-CCc-cc-----------------cCCCcEEEEEeCCCccHHHHHHHHHHhC
Q psy16848 375 ILSSQEGVELRAKHQDIVAYLRNELIQI-GFP-VE-----------------HTPSHIIPIKIGNPALNTKICDMLLKEK 435 (514)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-----------------~~~~~~~~i~l~~~~~~~~~~~~Ll~~~ 435 (514)
.+ +.++++..++++++.+.|++. .+. +. ...++++.|.+.+......|++.| +--
T Consensus 327 tL-----~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~~~~~f~~~l-~l~ 400 (464)
T PLN02509 327 TM-----ALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETT-KYF 400 (464)
T ss_pred hH-----HHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHHHcC-Ccc
Confidence 55 347788888889999999876 222 10 113558888885333344555555 222
Q ss_pred CeEEecccC------CC------C--------CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 436 GHYVQPINY------PT------V--------PVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 436 GI~v~~~~~------~~------~--------~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
.+.++-|.. |. . ...++.||++++. |+++.+++-|+++++
T Consensus 401 ~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGl----E~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 401 SIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFR 460 (464)
T ss_pred eEcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHc
Confidence 222221110 00 0 0125799999994 456666666666554
No 295
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=7.9e-20 Score=185.24 Aligned_cols=214 Identities=16% Similarity=0.132 Sum_probs=158.8
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+....++++++++.|.+.+++++||++|+..++.++.+ +||+|+++.+.|.+....+..
T Consensus 52 npt~~~Le~~lA~leg~e~ivvt~gg~~Ai~~~l~all~--~Gd~Il~~~~~y~~~~~~~~~------------------ 111 (388)
T PRK08861 52 NPNRGLLEQTLSELESGKGAVVTNCGTSALNLWVSALLG--PDDLIVAPHDCYGGTYRLFNT------------------ 111 (388)
T ss_pred CchHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcC--CCCEEEEcCCchHHHHHHHHH------------------
Confidence 456789999999999999999999999999999988866 999999999988766532210
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 112 -------------------------------------------------------------------------------- 111 (388)
T PRK08861 112 -------------------------------------------------------------------------------- 111 (388)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
.....|.++.+++..|.+.+++.+ ++++++|++++|+||+|.++|+++|.++|+++|+++|+|++|
T Consensus 112 ----------~~~~~gi~v~~vd~~d~e~l~~~i----~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~ 177 (388)
T PRK08861 112 ----------RANKGDFKVQFVDQSDAAALDAAL----AKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTF 177 (388)
T ss_pred ----------HHhcCCeEEEEECCCCHHHHHHhc----CcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCc
Confidence 011123445555544555555444 346899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
..+... ..+..++|++++|++|++++. ||++++ ++++.+.++..+... +..+++..+..+...|
T Consensus 178 ~~~~~~---------~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~--G~~~~p~~a~l~~rgl 246 (388)
T PRK08861 178 LTPVLQ---------KPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCI--GATGTPFDSYMTLRGI 246 (388)
T ss_pred cccccC---------CCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhcc--CCCCChHHHHHHHhcC
Confidence 855431 111347899999999999763 487776 456767666544333 4466777777665555
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
+- +.-+.++..+++..+.+.|++.
T Consensus 247 ~T-----l~lR~~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 247 RT-----LGARMRVHEESAQQILAYLQTQ 270 (388)
T ss_pred CC-----HHHHHHHHHHHHHHHHHHHHhC
Confidence 43 3346777888888888989876
No 296
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=1.5e-19 Score=184.77 Aligned_cols=214 Identities=19% Similarity=0.142 Sum_probs=157.3
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+..++++++++++.|.+.+++++||++|+..++.++.+ +||+|+++.+.|......++
T Consensus 59 ~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l~all~--pGD~Vvv~~p~Y~~t~~~~~------------------- 117 (405)
T PRK08776 59 NPTRDLLGEALAELEGGAGGVITATGMGAINLVLNALLQ--PGDTLVVPHDAYGGSWRLFN------------------- 117 (405)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHHHHHhC--CCCEEEEccCCchHHHHHHH-------------------
Confidence 456789999999999999999999999988888888865 99999999998877542211
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 118 -------------------------------------------------------------------------------- 117 (405)
T PRK08776 118 -------------------------------------------------------------------------------- 117 (405)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
..+...|.+++.++..|.+.+++.++ +++++|++++|+||+|.+.++++|.++|+++|+++|+|++|
T Consensus 118 ---------~~~~~~g~~v~~v~~~d~~~l~~~i~----~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~ 184 (405)
T PRK08776 118 ---------ALAKKGHFALITADLTDPRSLADALA----QSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTF 184 (405)
T ss_pred ---------HHHHhcCcEEEEECCCCHHHHHHhcC----cCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCC
Confidence 01112244455555445555555443 46899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
..+.. . .....++|++++|++|.+++. ||+++. ++++.+.+....... +...++..+.++...+
T Consensus 185 a~~~~------~---~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~--g~~~s~~~a~l~~~gl 253 (405)
T PRK08776 185 LSPAL------Q---KPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANAL--GLTGSPFDAFLTLRGL 253 (405)
T ss_pred ccccc------C---CcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhc--CCCCCHHHHHHHHhhh
Confidence 84321 0 111236899999999999753 377765 567777776544333 2346777777766555
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
+. ++.++++..++...+.+.|++.
T Consensus 254 ~t-----l~~r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 254 RT-----LDARLRVHQENADAIAALLDGH 277 (405)
T ss_pred Cc-----HHHHHHHHHHHHHHHHHHHHcC
Confidence 43 3457788888888999988876
No 297
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=6.7e-20 Score=184.94 Aligned_cols=214 Identities=12% Similarity=0.090 Sum_probs=162.8
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+-...+|++++++-|.+.+++++||+.|+.+++.++.+ +||+|+++...|..+...++
T Consensus 61 nPt~~~le~~la~LEg~~~a~~~~SGmaAi~~~~~~ll~--~GD~Vv~~~~~Yg~t~~l~~------------------- 119 (395)
T PRK08114 61 TLTHFSLQEAMCELEGGAGCALYPCGAAAVANAILAFVE--QGDHVLMTGTAYEPTQDFCS------------------- 119 (395)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHHHcC--CCCEEEEeCCCcHHHHHHHH-------------------
Confidence 567889999999999999999999999999988888866 99999999888877764321
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 120 -------------------------------------------------------------------------------- 119 (395)
T PRK08114 120 -------------------------------------------------------------------------------- 119 (395)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcC--CEEEEec
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHG--ALTFVDE 296 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~g--v~li~De 296 (514)
..+...|.++.+++..|.+.+++.+ .++|++|+++++.||+|.+.|+++|.++|+++| +++++|.
T Consensus 120 ---------~~l~~~Gi~v~~vd~~d~~~l~~~l----~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDn 186 (395)
T PRK08114 120 ---------KILSKLGVTTTWFDPLIGADIAKLI----QPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDN 186 (395)
T ss_pred ---------HHHHhcCcEEEEECCCCHHHHHHhc----CCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEEC
Confidence 1122345566666655655555555 346899999999999999999999999999984 9999999
Q ss_pred cccccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHH
Q psy16848 297 VHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREA 372 (514)
Q Consensus 297 a~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~ 372 (514)
+++.+.. ......++|+++.|.+|++++.+ |+++.+++..+.+....... +..+++..+..+...
T Consensus 187 T~a~p~~---------~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~--G~~~~p~~a~l~~rg 255 (395)
T PRK08114 187 TWAAGVL---------FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLM--GQMVDADTAYMTSRG 255 (395)
T ss_pred CCccccc---------cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhc--cCCCCHHHHHHHHcC
Confidence 9985542 22234589999999999998754 87777777766665433322 446677777665555
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 373 IRILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 373 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
|+- +.-++++..+++..+.+.|++.
T Consensus 256 l~T-----L~lR~~~~~~na~~va~~L~~h 280 (395)
T PRK08114 256 LRT-----LGVRLRQHEESSLKVAEWLAEH 280 (395)
T ss_pred CCc-----HHHHHHHHHHHHHHHHHHHHcC
Confidence 543 3347788888899999999876
No 298
>PLN02368 alanine transaminase
Probab=99.86 E-value=4.6e-20 Score=188.66 Aligned_cols=253 Identities=12% Similarity=0.033 Sum_probs=173.8
Q ss_pred cccCcchHHHHHHHHHHhHcCC---CcEEEEecc-ccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeecc
Q psy16848 54 NISGNSLFHEKLEEDVAKLHQK---EAGLVFTSC-YVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYR 129 (514)
Q Consensus 54 ~~~~~~~~~~~~~~~la~~~~~---~~~i~~~sG-t~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~ 129 (514)
...|..++.+++.+++.+..|. +..|++|+| ++++..++.++. ..+||.|+++.++|......++..|.+++.++
T Consensus 105 ~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~-~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~ 183 (407)
T PLN02368 105 DSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVI-RGEKDGVLVPVPQYPLYSATISLLGGTLVPYY 183 (407)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHc-CCCCCEEEEeCCCCccHHHHHHHcCCEEEEEe
Confidence 3345556666666666655452 234556665 456777777765 13999999999999999998888888877654
Q ss_pred CCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHH
Q psy16848 130 HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMD 209 (514)
Q Consensus 130 ~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~ 209 (514)
.... .++
T Consensus 184 ~~~~------------------------------------------------------------~~~------------- 190 (407)
T PLN02368 184 LEES------------------------------------------------------------ENW------------- 190 (407)
T ss_pred cccc------------------------------------------------------------cCC-------------
Confidence 3100 000
Q ss_pred HHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhcc--CCCceEEEEecCCCCCccccC---HHHHHHH
Q psy16848 210 IISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMD--VKIPKLVAFETVHSMTGAICP---LKELCEV 284 (514)
Q Consensus 210 ~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~--~~~~~~vv~~~~~nptG~~~~---l~~l~~l 284 (514)
.-|.+.+++.+.+.. ..+++++++++|+||||.+++ +++|.++
T Consensus 191 --------------------------------~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~ 238 (407)
T PLN02368 191 --------------------------------GLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKF 238 (407)
T ss_pred --------------------------------CCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHH
Confidence 014556666665321 126899999999999999999 7888999
Q ss_pred HHHcCCEEEEeccccccccCC--CCCCccccC-CC-----ccCceEEEcCCcccc-cCCC---eEEE---ecHHHHHHHH
Q psy16848 285 SHQHGALTFVDEVHAVGLYGE--HGAGIGERD-GQ-----LHNMDIISGTLGKAF-GNIG---GYIV---GTKNFIDTIR 349 (514)
Q Consensus 285 ~~~~gv~li~Dea~~~g~~g~--~~~~~~~~~-~~-----~~~~di~~~S~sK~l-g~~G---G~l~---~~~~~~~~l~ 349 (514)
|++|++++|+||+|....++. ...++.... .. ..+..+++.||||.+ +.+| ||++ +++++++.+.
T Consensus 239 a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~ 318 (407)
T PLN02368 239 CYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIY 318 (407)
T ss_pred HHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHH
Confidence 999999999999999544322 121221110 00 123689999999998 6678 9998 4888988887
Q ss_pred hhcCceEeccCCcHHHHHHHHHHHHHhh---------hchHHHHHHHHHHHHHHHHHHHHhC-CCccccCCCcEEE
Q psy16848 350 SYAAGFIFTTSLPPTVLAGAREAIRILS---------SQEGVELRAKHQDIVAYLRNELIQI-GFPVEHTPSHIIP 415 (514)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 415 (514)
... .. ..+.+.+.+.++.++|+... .++..++++.++++++.+.+.|+++ |+.+..+.|.|+.
T Consensus 319 ~~~-~~--~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~ 391 (407)
T PLN02368 319 KVA-SI--ALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYS 391 (407)
T ss_pred HHh-cc--cCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEe
Confidence 753 22 23567788888888875211 1122346788899999999999998 8888778877554
No 299
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=1.9e-19 Score=182.94 Aligned_cols=287 Identities=11% Similarity=0.079 Sum_probs=191.3
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+..++++++++++.|.+.+++++||++|+..++.++.+ +||+|+++.+.|.++...+...
T Consensus 51 ~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~l~~l~~--~GD~Vl~~~~~y~~~~~~~~~~----------------- 111 (386)
T PRK08045 51 NPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLK--PGDLLVAPHDCYGGSYRLFDSL----------------- 111 (386)
T ss_pred CccHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcC--CCCEEEEcCCCcHHHHHHHHHH-----------------
Confidence 356789999999999988889899999999888888866 9999999999998755322110
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 112 -------------------------------------------------------------------------------- 111 (386)
T PRK08045 112 -------------------------------------------------------------------------------- 111 (386)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
....|.++..++..|.+.+++.+ .+++++|++++|+||+|.++|+++|.++|+++|+++|+|++|
T Consensus 112 -----------~~~~gi~v~~vd~~d~e~l~~~l----~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay 176 (386)
T PRK08045 112 -----------AKRGCYRVLFVDQGDEQALRAAL----AEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTF 176 (386)
T ss_pred -----------HhhCCeEEEEeCCCCHHHHHHhc----ccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCC
Confidence 00111233333333444444444 346899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
..+... .....++|+++.|++|++++. ||++++ ++++.+.+....... +...++..+..+...|
T Consensus 177 ~~~~~~---------~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~--g~~~~p~~~~l~~rgl 245 (386)
T PRK08045 177 LSPALQ---------NPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNI--GVTGGAFDSYLLLRGL 245 (386)
T ss_pred CccccC---------CchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhc--CCCCCHHHHHHHHhhh
Confidence 854321 111336799999999999752 277765 577877776544443 4467888887777777
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc------------------cCCCcEEEEEeCCC-ccHHHHHHHHHH
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE------------------HTPSHIIPIKIGNP-ALNTKICDMLLK 433 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~------------------~~~~~~~~i~l~~~-~~~~~~~~~Ll~ 433 (514)
+. +..++++..+++..+.+.|++. .+..+ ...++++.|.+.+. .....|++.| +
T Consensus 246 ~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l-~ 319 (386)
T PRK08045 246 RT-----LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGL-S 319 (386)
T ss_pred cc-----HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhc-c
Confidence 64 3457788888889999999876 22110 11355888888642 2234566655 2
Q ss_pred hCCeEEecccC------CCC--------------CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 434 EKGHYVQPINY------PTV--------------PVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 434 ~~GI~v~~~~~------~~~--------------~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
--.+.++-|.. |.. ...++.+|+|++.. +.+.+++-|++.++.
T Consensus 320 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~~ 382 (386)
T PRK08045 320 LFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIE----DGEDLIADLENGFRA 382 (386)
T ss_pred ceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcC----CHHHHHHHHHHHHHH
Confidence 22222221110 000 01257999999954 455555555555544
No 300
>PLN03032 serine decarboxylase; Provisional
Probab=99.86 E-value=3.9e-19 Score=178.33 Aligned_cols=318 Identities=14% Similarity=0.085 Sum_probs=216.9
Q ss_pred hhHHHHHHHHHH-HhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC--c--EEEEeccccccccchhhccccCCCceEEe
Q psy16848 32 KGGRKCLGEALE-KFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE--A--GLVFTSCYVANDSTLFTLGKMIPGLHYIS 106 (514)
Q Consensus 32 ~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~--~i~~~sGt~a~~~~l~~l~~~~~gd~v~~ 106 (514)
+...+++.+.+. .+|..+..+.......++.+++.+++++++|.+ . .+|+++||++|+.++.+.....++.+|++
T Consensus 37 ~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~ 116 (374)
T PLN03032 37 YGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYA 116 (374)
T ss_pred hHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEe
Confidence 345566666554 344433322222245788889999999999864 2 48888899999988876543235679999
Q ss_pred cCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccc
Q psy16848 107 DAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 186 (514)
Q Consensus 107 ~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (514)
++.+|.++..+++..+..+..++.+.
T Consensus 117 s~~~H~Sv~kaa~~lg~~~~~V~~d~------------------------------------------------------ 142 (374)
T PLN03032 117 SRESHYSVFKAARMYRMEAVKVPTLP------------------------------------------------------ 142 (374)
T ss_pred CCCceeHHHHHHHHcCCCCeEeeeCC------------------------------------------------------
Confidence 99999999999888776544332110
Q ss_pred cccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEe
Q psy16848 187 AVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFE 266 (514)
Q Consensus 187 ~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~ 266 (514)
.| .-|.+.+++.+.+. +.++.+++++
T Consensus 143 ---------~g--------------------------------------------~id~~~L~~~i~~~-~~~~~lvv~t 168 (374)
T PLN03032 143 ---------SG--------------------------------------------EIDYDDLERALAKN-RDKPAILNVN 168 (374)
T ss_pred ---------CC--------------------------------------------cCcHHHHHHHHHHc-CCCCEEEEEE
Confidence 00 11556666666543 2246788888
Q ss_pred cCCCCCccccCHHHHHHHHHHcC-----CEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc-CCC-eEEE
Q psy16848 267 TVHSMTGAICPLKELCEVSHQHG-----ALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG-NIG-GYIV 339 (514)
Q Consensus 267 ~~~nptG~~~~l~~l~~l~~~~g-----v~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg-~~G-G~l~ 339 (514)
..+|++|.+.|+++|.++|+++| +++++|.+++.+..--.. ...... ....+|.++.|.||+++ +.| |+++
T Consensus 169 agtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~-~~~~~~-~~~~vDSis~s~HK~~g~P~g~G~ll 246 (374)
T PLN03032 169 IGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVS-RAPEVT-FRKPIGSVSVSGHKFLGCPMPCGVAL 246 (374)
T ss_pred ecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccC-CCcccC-CCcCCcEEEECcccccCCCcCeEEEE
Confidence 99999999999999999999997 589999999855431000 000111 12368999999999998 777 8888
Q ss_pred ecHHHHHHHHhhcCc-----eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccc-cCCCcE
Q psy16848 340 GTKNFIDTIRSYAAG-----FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVE-HTPSHI 413 (514)
Q Consensus 340 ~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~ 413 (514)
.++..++.+...... .+...+-+......+..+|..+..+++.++.++..++.+++.+.|++.++... .|....
T Consensus 247 ~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~~ 326 (374)
T PLN03032 247 TRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNELSST 326 (374)
T ss_pred EEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCCceE
Confidence 887776655432211 11122334455667777788777788889999999999999999999887754 455555
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 414 IPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 414 ~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
+.+.-+.. . .+ .+|..+.. ..+.+++.+...++++.+|++++.|++
T Consensus 327 V~f~~~~~---~----~~--~~~w~l~~--------~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 327 VVFERPMD---E----AF--IKKWQLAC--------EGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred EEEcCCCc---H----hH--hheeeecc--------cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 55554421 1 12 35665542 124899999988999999999988875
No 301
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.86 E-value=3.3e-20 Score=187.06 Aligned_cols=283 Identities=13% Similarity=0.065 Sum_probs=185.7
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...+|+++++++.|.+++++++||++|+.+++ .+.+ +||+|+++...|.....-+..
T Consensus 53 ~p~~~~le~~lA~leg~~~~v~~~sG~aAi~~~l-~~l~--~GD~VI~~~~~yg~~~~~~~~------------------ 111 (364)
T PRK07269 53 NPTRAKLEETLAAIESADYALATSSGMSAIVLAF-SVFP--VGSKVVAVRDLYGGSFRWFNQ------------------ 111 (364)
T ss_pred CccHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHH-HHhC--CCCEEEEecCCcCchHHHHHH------------------
Confidence 3567899999999999999999999999988887 4544 999999987766443311100
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
...+
T Consensus 112 ~~~~---------------------------------------------------------------------------- 115 (364)
T PRK07269 112 QEKE---------------------------------------------------------------------------- 115 (364)
T ss_pred HHhc----------------------------------------------------------------------------
Confidence 0000
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
.+.++.+ ..|.+.+ ++..+++|++|++++|+||+|.+.++++|.++|+++|+++|+|+++
T Consensus 116 --------------~~~~~~~--~~d~~~l----~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~ 175 (364)
T PRK07269 116 --------------GRFHFTY--ANTEEEL----IAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTF 175 (364)
T ss_pred --------------CcEEEEe--cCCHHHH----HHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCC
Confidence 0000000 1133333 3344567999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
..+... ..+..++|++++|++|.+++. ||++++ ++++.+.++...... +..+++..++.+...|
T Consensus 176 ~~~~~~---------~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~--G~~~s~~~a~l~~~~L 244 (364)
T PRK07269 176 YSPIYQ---------RPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTT--GAVLSPFDSYLLMRGL 244 (364)
T ss_pred cccccC---------CchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHh--CCCCCHHHHHHHHcCC
Confidence 633221 112347899999999999762 488776 567777776433222 3467888877777777
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCc-c-ccCCCcEEEEEeCCCccHHHHHHHHH---------HhCCeEEec
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFP-V-EHTPSHIIPIKIGNPALNTKICDMLL---------KEKGHYVQP 441 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~i~l~~~~~~~~~~~~Ll---------~~~GI~v~~ 441 (514)
+. ++.++++..++...+.+.|++. ++. + .++.++++.|.+.+......|.+.+- ..+.+.+.|
T Consensus 245 ~t-----L~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p 319 (364)
T PRK07269 245 KT-----LSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLGGVESLITYP 319 (364)
T ss_pred Cc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeCC
Confidence 64 3457788888999999999886 333 2 25677888988864223334444441 012233333
Q ss_pred ccCCCC----------CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 442 INYPTV----------PVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 442 ~~~~~~----------~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
...... ...++.+|++++.. +.+.+++-|++.+
T Consensus 320 ~~~~~~~~~~~~r~~~Gi~~~liRlsvGlE----~~~dli~dl~~al 362 (364)
T PRK07269 320 TTQTHADIPAEVRHSYGLTDDLLRLSIGIE----DARDLIADLKQAL 362 (364)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHh
Confidence 221100 01257999999954 4555555555544
No 302
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.85 E-value=1.2e-19 Score=199.31 Aligned_cols=308 Identities=14% Similarity=0.148 Sum_probs=216.7
Q ss_pred ccCcchHHHHHHHHHHhHcCCCcEEEEeccc----cccccchhhccccCCCc----eEEecCccchhhhhhhhcCCCCee
Q psy16848 55 ISGNSLFHEKLEEDVAKLHQKEAGLVFTSCY----VANDSTLFTLGKMIPGL----HYISDAGNHASMIQGIRNSSAPKI 126 (514)
Q Consensus 55 ~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt----~a~~~~l~~l~~~~~gd----~v~~~~~~h~~~~~~~~~~~~~~~ 126 (514)
..|+.+.+.++++++++++|.+.++|.+++| .++..++.++.+ .+|| +|+++..+|.++...+...|.+++
T Consensus 563 ~~g~~~~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~-~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv 641 (993)
T PLN02414 563 AQGYQEMFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHL-SRGDHHRNVCIIPVSAHGTNPASAAMCGMKIV 641 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHh-ccCCCCCCEEEeCCCcCccCHHHHHHCCCEEE
Confidence 4467788999999999999998888887766 678888888764 2377 999999999998877666666665
Q ss_pred eccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchh
Q psy16848 127 IYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLH 206 (514)
Q Consensus 127 ~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~ 206 (514)
.++.++ .|
T Consensus 642 ~v~~d~---------------------------------------------------------------~G--------- 649 (993)
T PLN02414 642 VVGTDA---------------------------------------------------------------KG--------- 649 (993)
T ss_pred EeccCC---------------------------------------------------------------CC---------
Confidence 544310 00
Q ss_pred hHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHH
Q psy16848 207 NMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSH 286 (514)
Q Consensus 207 ~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~ 286 (514)
.-|++.+++.+++. ++++++|++++++|.+|...|+++|.++|+
T Consensus 650 -----------------------------------~vDle~L~~~i~~~-~~~ta~V~vt~pSn~gg~e~~I~eI~~iah 693 (993)
T PLN02414 650 -----------------------------------NINIEELRKAAEAH-KDNLAALMVTYPSTHGVYEEGIDEICDIIH 693 (993)
T ss_pred -----------------------------------CcCHHHHHHHHhcc-CCCeEEEEEECCCccccccchHHHHHHHHH
Confidence 11556666666432 236899999999999999999999999999
Q ss_pred HcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc-C-----CC-eEEEecHHHHHHHHhhc--C--ce
Q psy16848 287 QHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG-N-----IG-GYIVGTKNFIDTIRSYA--A--GF 355 (514)
Q Consensus 287 ~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg-~-----~G-G~l~~~~~~~~~l~~~~--~--~~ 355 (514)
++|+++++|.++..+..+ +.... ..++|++++|.||+++ + +| |++++++++...+.... . .+
T Consensus 694 ~~Galv~vDgAq~~a~~~-----l~~p~--~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~ 766 (993)
T PLN02414 694 DNGGQVYMDGANMNAQVG-----LTSPG--FIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGI 766 (993)
T ss_pred HcCCEEEEEecCHHhccC-----cCCcc--ccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCc
Confidence 999999999999865432 11111 4489999999999775 2 23 99999988776654211 0 00
Q ss_pred E---ec---cC------CcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccCCCcE---EEEEeC
Q psy16848 356 I---FT---TS------LPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHTPSHI---IPIKIG 419 (514)
Q Consensus 356 ~---~~---~~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~---~~i~l~ 419 (514)
. -+ .+ .+...+.++...+..+..+++.+..++...+.+|+++.|.+. ++.+..+.+++ +.+.+.
T Consensus 767 ~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~ 846 (993)
T PLN02414 767 PRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLR 846 (993)
T ss_pred ccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEecc
Confidence 0 00 11 111233333444444445667777888999999999999874 44444433442 222322
Q ss_pred ---C--CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Q psy16848 420 ---N--PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 420 ---~--~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~~ 483 (514)
. +.+..++.++|+ +.||......+ + ..+.+|++++...+++|+|+++++|..+.++...
T Consensus 847 ~l~~~~g~~~~di~krL~-d~Gihapt~~~---p-v~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 847 PFKNTAGIEPEDVAKRLM-DYGFHAPTMSW---P-VPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred ccccccCCCHHHHHHHHH-HcCcEEeeecc---c-cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 245688999997 99998754333 2 2678999999999999999999999999887653
No 303
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.85 E-value=2.5e-19 Score=187.07 Aligned_cols=296 Identities=18% Similarity=0.209 Sum_probs=190.0
Q ss_pred cCcchHHHHHHHHHHhHcCCCc--EEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCCh
Q psy16848 56 SGNSLFHEKLEEDVAKLHQKEA--GLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDV 133 (514)
Q Consensus 56 ~~~~~~~~~~~~~la~~~~~~~--~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~ 133 (514)
.|..+...++.+++++++|.+. .+++++||+++..++.++. ..+||.|+++++.|.+...+++..
T Consensus 108 ~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~-~~~g~~Vlv~~~~~~~~~~~~~~~------------ 174 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVR-ITKRKKVLVSGAVHPEYREVLKTY------------ 174 (447)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHH-hcCCCEEEEeCccCHHHHHHHHHH------------
Confidence 3444555666688899998763 3556666766666666653 238999999999998877554321
Q ss_pred HHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHh
Q psy16848 134 NHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISG 213 (514)
Q Consensus 134 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~ 213 (514)
T Consensus 175 -------------------------------------------------------------------------------- 174 (447)
T PRK00451 175 -------------------------------------------------------------------------------- 174 (447)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccCCceeeecchHHHHhhCCCCEEEecCC-ChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEE
Q psy16848 214 TLVNPEVAIHASMIQGIRNSSAPKIIYRHN-DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALT 292 (514)
Q Consensus 214 ~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~l 292 (514)
....|.+++.++.+ + ....+.+++..++++++++++++ |++|.+.|+++|.++|+++|+++
T Consensus 175 ----------------~~~~G~~~~~v~~~~~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~ 236 (447)
T PRK00451 175 ----------------LKGQGIEVVEVPYEDG-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALF 236 (447)
T ss_pred ----------------HHhCCcEEEEecCCCC-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEE
Confidence 01123344444421 1 22233444444567899999998 89999999999999999999999
Q ss_pred EE--eccccccccCCCCCCccccCCCccCceEEEcCCccc-----ccCCC-eEEEecHHHHHHHHhhcC-----------
Q psy16848 293 FV--DEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKA-----FGNIG-GYIVGTKNFIDTIRSYAA----------- 353 (514)
Q Consensus 293 i~--Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~-----lg~~G-G~l~~~~~~~~~l~~~~~----------- 353 (514)
++ |.+ +.|... ..+ ..+.|++++|.+|+ ++++| |++++++++++.+.....
T Consensus 237 iv~~d~~-~~g~~~--------~~~-~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~ 306 (447)
T PRK00451 237 IVGVDPV-SLGLLK--------PPG-EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRG 306 (447)
T ss_pred EEEcChH-HhccCC--------Ccc-cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCee
Confidence 98 433 333321 111 34789999865553 34345 888888888887421100
Q ss_pred ---------------ceEeccCCcH-HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccCCCcE---
Q psy16848 354 ---------------GFIFTTSLPP-TVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHTPSHI--- 413 (514)
Q Consensus 354 ---------------~~~~~~~~~~-~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~--- 413 (514)
....+...+. ....++..+++.+.+++++++.+++.++++++.+.|+++ ++.+. .+.+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~ 384 (447)
T PRK00451 307 FVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELF--DGPFFNE 384 (447)
T ss_pred eEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CCCeEEE
Confidence 0000111111 121333334555556678899999999999999999988 66664 2232
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCeEEe-cccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 414 IPIKIGNPALNTKICDMLLKEKGHYVQ-PINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 414 ~~i~l~~~~~~~~~~~~Ll~~~GI~v~-~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
+.+.++ .+..+++++|. ++||.+. ++.. ..+...+++|++++..+|+++++++++.|++++
T Consensus 385 ~~v~~~--~~~~~~~~~L~-~~gi~~~~~~~~-~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 385 FVVRLP--KPAEEVNEALL-EKGILGGYDLGR-YYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred EEEecC--CCHHHHHHHHH-hcCCCCCccccc-ccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 224443 24678999996 7887642 2222 112224689999998899999999999998764
No 304
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.85 E-value=1.3e-19 Score=183.99 Aligned_cols=286 Identities=13% Similarity=0.102 Sum_probs=189.5
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...++++.++++.|.+.+++++||++|+..++.++.+ +||+|+++.+.|.++...+...
T Consensus 50 ~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~l~all~--~GD~Vl~~~p~y~~~~~~~~~~----------------- 110 (382)
T TIGR02080 50 NPTRDLLQQALAELEGGAGAVVTNTGMSAIHLVTTALLG--PDDLLVAPHDCYGGTYRLLNAL----------------- 110 (382)
T ss_pred CchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcC--CCCEEEEcCCCcHHHHHHHHHH-----------------
Confidence 356789999999999988899899999999999988866 9999999999998765322110
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 111 -------------------------------------------------------------------------------- 110 (382)
T TIGR02080 111 -------------------------------------------------------------------------------- 110 (382)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
....+.++..++..|.+.+++.+ .+++++|++++|+||+|.++++++|.++|+++|+++|+|++|
T Consensus 111 -----------~~~~~~~v~~~d~~d~~~l~~ai----~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~ 175 (382)
T TIGR02080 111 -----------AKKGCFRVLFVDQGDEQALRAAL----AQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTF 175 (382)
T ss_pred -----------HhhcCeEEEEECCCCHHHHHHhc----CcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCC
Confidence 01112233333333444444444 346899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccC-C---CeEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN-I---GGYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~-~---GG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
..+... .....+.|++++|++|++++ . +|+++. ++++.+.+....... +..+++..+..+...+
T Consensus 176 ~~~~~~---------~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~--g~~~sp~~a~l~lr~l 244 (382)
T TIGR02080 176 LSPALQ---------NPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNL--GVTGGAFDSYLTLRGL 244 (382)
T ss_pred cccccC---------CchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHcc--CCCCCHHHHHHHHccc
Confidence 854321 11123679999999999975 2 377765 677888776555443 4467788777766665
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCc---c--c-------------cCCCcEEEEEeCCCc-cHHHHHHHHHH
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFP---V--E-------------HTPSHIIPIKIGNPA-LNTKICDMLLK 433 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~---~--~-------------~~~~~~~~i~l~~~~-~~~~~~~~Ll~ 433 (514)
+.+ ..++++..++...+.+.|++. .+. + . ...++++.|.+.+.. ....|.+.| +
T Consensus 245 ~tl-----~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l-~ 318 (382)
T TIGR02080 245 RTL-----VARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGL-S 318 (382)
T ss_pred chH-----HHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcC-C
Confidence 533 335667778888888888875 221 0 0 113558899986422 234555555 2
Q ss_pred hCCeEEecccC------CCC------C--------CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 434 EKGHYVQPINY------PTV------P--------VGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 434 ~~GI~v~~~~~------~~~------~--------~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
--.+.++-|.. |.. + ..++.+|+|++. |+.+.+++-|++.++
T Consensus 319 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~dl~~dl~~al~ 380 (382)
T TIGR02080 319 LFTLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGL----EDADDLIADLEQGLR 380 (382)
T ss_pred cceEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 22222221110 000 0 124689999995 445555666665554
No 305
>PRK05939 hypothetical protein; Provisional
Probab=99.85 E-value=2.1e-19 Score=183.21 Aligned_cols=243 Identities=13% Similarity=0.091 Sum_probs=163.0
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...++|++++++.|.++++.++||+.|+..++.++.+ +||+|++++..|.+....
T Consensus 46 ~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~--~Gd~Vv~~~~~y~~t~~~--------------------- 102 (397)
T PRK05939 46 TPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLR--AGDHLVSSQFLFGNTNSL--------------------- 102 (397)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcC--CCCEEEECCCccccHHHH---------------------
Confidence 466889999999999999999999999999988888865 999999998887654311
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 103 -------------------------------------------------------------------------------- 102 (397)
T PRK05939 103 -------------------------------------------------------------------------------- 102 (397)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
...+...|++++.++..|.+.+++.+ ++++++|++++++||+|.+.|+++|.++|+++|+++|+|+++
T Consensus 103 --------~~~l~~~G~~v~~v~~~d~e~l~~~l----~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~ 170 (397)
T PRK05939 103 --------FGTLRGLGVEVTMVDATDVQNVAAAI----RPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTM 170 (397)
T ss_pred --------HHHHHhcCCEEEEECCCCHHHHHHhC----CCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCc
Confidence 11122335555555555555555544 356899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCCC---eEEEec-HH--------HHH-------------HHHhhcC
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYIVGT-KN--------FID-------------TIRSYAA 353 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~-~~--------~~~-------------~l~~~~~ 353 (514)
+.+.. ......++|+++.|++|++++.| |.++.+ .. +.+ .+.....
T Consensus 171 a~~~~---------~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (397)
T PRK05939 171 TSPWL---------FRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGL 241 (397)
T ss_pred ccccc---------cCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHH
Confidence 74321 11223478999999999998766 333332 21 111 1111000
Q ss_pred ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCc---c---------------ccCCCcEE
Q psy16848 354 GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFP---V---------------EHTPSHII 414 (514)
Q Consensus 354 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~---~---------------~~~~~~~~ 414 (514)
..++..+++..+..+...++. +..+.++..++...+.+.|++. .+. + ....|.++
T Consensus 242 -~~~G~~~~p~~a~l~~rgl~t-----l~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~ 315 (397)
T PRK05939 242 -RDMGATLSSEAAHRIAIGAET-----LALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLL 315 (397)
T ss_pred -HhcCCCCCHHHHHHHHcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEE
Confidence 011335666666555544443 3346666777888888888876 221 1 01235588
Q ss_pred EEEeCCCccHHHHHHHH
Q psy16848 415 PIKIGNPALNTKICDML 431 (514)
Q Consensus 415 ~i~l~~~~~~~~~~~~L 431 (514)
.|.+.+......|.+.+
T Consensus 316 sf~~~~~~~~~~f~~~l 332 (397)
T PRK05939 316 SFELADGIDCFDFLNRL 332 (397)
T ss_pred EEEeCCHHHHHHHHHhC
Confidence 88887543344555554
No 306
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.85 E-value=1.2e-18 Score=179.82 Aligned_cols=294 Identities=16% Similarity=0.159 Sum_probs=200.0
Q ss_pred hHHHHHHHHHHhHcCCCcEEEEeccccccccchhhcc-------ccCCCceEEecCccchhhhhhhhcCCCCeeeccCCC
Q psy16848 60 LFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLG-------KMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHND 132 (514)
Q Consensus 60 ~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~-------~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d 132 (514)
....++++.+++++|.+++++++|||+|+..++.++. ..+|||.|+++.++|.++..++...|++++.++.+
T Consensus 63 ~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd- 141 (438)
T PRK15407 63 RFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVE- 141 (438)
T ss_pred hhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecC-
Confidence 4578999999999999999999999999999888763 34699999999999999988877777665543221
Q ss_pred hHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHH
Q psy16848 133 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIIS 212 (514)
Q Consensus 133 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~ 212 (514)
T Consensus 142 -------------------------------------------------------------------------------- 141 (438)
T PRK15407 142 -------------------------------------------------------------------------------- 141 (438)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEE
Q psy16848 213 GTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALT 292 (514)
Q Consensus 213 ~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~l 292 (514)
..++..+.+.+++..++++++|+++++ .|...++++|.++|+++|+++
T Consensus 142 -----------------------------~~~~~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~v 189 (438)
T PRK15407 142 -----------------------------LPTYNIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWL 189 (438)
T ss_pred -----------------------------CCcCCcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEE
Confidence 011222233344444567899998875 577788999999999999999
Q ss_pred EEeccccccccCCCCCCccccCCCccCceEEEcCCc--cccc-CCCeEEEec-HHHHHHHHhhcC---------------
Q psy16848 293 FVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLG--KAFG-NIGGYIVGT-KNFIDTIRSYAA--------------- 353 (514)
Q Consensus 293 i~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~s--K~lg-~~GG~l~~~-~~~~~~l~~~~~--------------- 353 (514)
|+|++|++|..-. ++.. + . --|+.++||+ |.+. +.||+++.+ +++.+.++....
T Consensus 190 IeDaa~a~G~~~~-g~~~----G-~-~gd~~~fSf~~~k~~~~geGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~ 262 (438)
T PRK15407 190 IEDNCDALGSTYD-GRMT----G-T-FGDIATLSFYPAHHITMGEGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTC 262 (438)
T ss_pred EEECccchhhhcC-Ceee----e-c-cCceEEEeCCCCCCccccCceEEEECCHHHHHHHHHHHHhCccccccccccccc
Confidence 9999999876421 1111 1 1 1266677776 6564 346888775 455544432211
Q ss_pred ----------------------ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-C-Cccc--
Q psy16848 354 ----------------------GFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-G-FPVE-- 407 (514)
Q Consensus 354 ----------------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g-~~~~-- 407 (514)
..+++..++.+.++.+...|+.++ ++.++.+++.+++.+.|.+. + +.+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~-----~~~~~R~~~a~~y~~~L~~~~~~~~~~~~ 337 (438)
T PRK15407 263 GKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLP-----GFIEARKANFAYLKEGLASLEDFLILPEA 337 (438)
T ss_pred ccccccccccccccccccccccccccccCccHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhccCCCccccCcC
Confidence 023345678888888888888663 46777777888888888765 2 2121
Q ss_pred cCC--Cc--EEEEEeCC--CccHHHHHHHHHHhCCeEEecccC-C-----C-----------CCC----CCcEEEEEeCC
Q psy16848 408 HTP--SH--IIPIKIGN--PALNTKICDMLLKEKGHYVQPINY-P-----T-----------VPV----GEEKIRLAPTP 460 (514)
Q Consensus 408 ~~~--~~--~~~i~l~~--~~~~~~~~~~Ll~~~GI~v~~~~~-~-----~-----------~~~----~~~~iRl~~~~ 460 (514)
.+. .. .+.+.+.+ ..+.+++.+.| +++||.++.... + . .|. ..+.+-+.+..
T Consensus 338 ~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L-~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~ 416 (438)
T PRK15407 338 TPNSDPSWFGFPITVKEDAGFTRVELVKYL-EENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYP 416 (438)
T ss_pred CCCCeeEEEEEEEEECCcCCCCHHHHHHHH-HHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCC
Confidence 111 11 34455543 23578999999 599998763221 0 0 000 13567777888
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy16848 461 FHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 461 ~~t~e~id~~~~~l~~~l~ 479 (514)
.+|++|+++++++++++++
T Consensus 417 ~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 417 GLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCCHHHHHHHHHHHHHHHh
Confidence 8899999999999999875
No 307
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.85 E-value=1.8e-19 Score=182.87 Aligned_cols=286 Identities=17% Similarity=0.147 Sum_probs=184.3
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...+|+++++++.|.+++++++||+.|+.+++ .+.+ |||+|+++++.|.+....+.
T Consensus 49 ~p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l-~~l~--pGd~Vi~~~~~y~~t~~~~~------------------- 106 (380)
T PRK06176 49 NPTRFALEELIADLEGGVKGFAFASGLAGIHAVF-SLFQ--SGDHVLLGDDVYGGTFRLFD------------------- 106 (380)
T ss_pred ChhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHH-HHcC--CCCEEEEcCCChhHHHHHHH-------------------
Confidence 4568899999999999999999999999887555 4544 99999999988877653221
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 107 -------------------------------------------------------------------------------- 106 (380)
T PRK06176 107 -------------------------------------------------------------------------------- 106 (380)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
..+...|.++.+++..|.+.+++.+ ++++++|++++|+||+|.+.++++|.++|+++|+++|+|++|
T Consensus 107 ---------~~~~~~gi~v~~vd~~d~e~l~~ai----~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~ 173 (380)
T PRK06176 107 ---------KVLVKNGLSCTIIDTSDLSQIKKAI----KPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTF 173 (380)
T ss_pred ---------HHHHhcCeEEEEcCCCCHHHHHHhc----CcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCc
Confidence 1122234455555555555555544 346899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEec-HHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVGT-KNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
+.+.... . ...+.|++++|++|++++. ||+++.+ +++.+.+...+... +...++.........+
T Consensus 174 a~~~~~~-------p--~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~--G~~~~~~~~~l~~~gl 242 (380)
T PRK06176 174 ATPYYQN-------P--LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAI--GGVLGPQDSWLLQRGI 242 (380)
T ss_pred cccccCC-------c--cccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHh--cCCCCHHHHHHHHhcc
Confidence 8543321 1 1347899999999999763 4877764 56666665444332 2234444443333322
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCc-----c-------------ccCCCcEEEEEeCCCccHHHHHHHHHHh
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFP-----V-------------EHTPSHIIPIKIGNPALNTKICDMLLKE 434 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-----~-------------~~~~~~~~~i~l~~~~~~~~~~~~Ll~~ 434 (514)
+ .+..++++..+....+.+.|++. .+. - ....++++.|.+.+.....+|++.| +-
T Consensus 243 ~-----tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l-~~ 316 (380)
T PRK06176 243 K-----TLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESL-KL 316 (380)
T ss_pred C-----cHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcC-Cc
Confidence 2 23345566667777777877765 221 0 1113558889886533344555554 22
Q ss_pred CCeEEecccC------CCC--------------CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 435 KGHYVQPINY------PTV--------------PVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 435 ~GI~v~~~~~------~~~--------------~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
..+.++-|.. |.. ...++.+|+|+++ |+++.+++-|++.+++
T Consensus 317 ~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~Al~~ 378 (380)
T PRK06176 317 FILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGI----EHEQDLLEDLEQAFAK 378 (380)
T ss_pred ceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 1222111110 000 0125799999994 4566666666666654
No 308
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=2.2e-19 Score=181.36 Aligned_cols=288 Identities=15% Similarity=0.075 Sum_probs=192.2
Q ss_pred cchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHH
Q psy16848 58 NSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLT 137 (514)
Q Consensus 58 ~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~ 137 (514)
..+..+.++++++.+-+.+.+++++||+.|+..++.++.+ +||+|+++.+.|.+....+.
T Consensus 62 gnPt~~~Le~~la~le~~~~~v~~sSG~aAi~~~l~all~--~GD~Vlv~~~~Y~~~~~l~~------------------ 121 (395)
T PRK05967 62 GTPTTDALCKAIDALEGSAGTILVPSGLAAVTVPFLGFLS--PGDHALIVDSVYYPTRHFCD------------------ 121 (395)
T ss_pred CChHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHhcC--CCCEEEEccCCcHHHHHHHH------------------
Confidence 4577889999999998888899999999999988888866 99999999998887652210
Q ss_pred HHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccC
Q psy16848 138 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVN 217 (514)
Q Consensus 138 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~ 217 (514)
T Consensus 122 -------------------------------------------------------------------------------- 121 (395)
T PRK05967 122 -------------------------------------------------------------------------------- 121 (395)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecc
Q psy16848 218 PEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEV 297 (514)
Q Consensus 218 ~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea 297 (514)
..+...|.++.+++..+.+. +++...++|++|++++|+||++...++++|.++|+++|+++|+|++
T Consensus 122 ----------~~l~~~Gi~v~~vd~~~~e~----l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t 187 (395)
T PRK05967 122 ----------TMLKRLGVEVEYYDPEIGAG----IAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNT 187 (395)
T ss_pred ----------HHHHhcCeEEEEeCCCCHHH----HHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECC
Confidence 11223344455554333333 3444456799999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 298 HAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 298 ~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
++.+.. ...+..++|+++.|.+|.+++.| |+++.++++.+.+....... +..+++..+..+...+
T Consensus 188 ~a~p~~---------~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~--G~~~~p~da~l~~rgl 256 (395)
T PRK05967 188 WATPLY---------FRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTL--GLCAGPDDTYQILRGL 256 (395)
T ss_pred ccCcee---------cChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHc--CCCCCHHHHHHHHcCc
Confidence 984332 12224589999999999998744 77777777666665333322 4467777766666555
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCc---c---------------ccCCCcEEEEEeCCC-----ccHHHHHH
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFP---V---------------EHTPSHIIPIKIGNP-----ALNTKICD 429 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~---~---------------~~~~~~~~~i~l~~~-----~~~~~~~~ 429 (514)
+.+ .-++++..++...+.+.|++. .+. + ....++++.|.+... ....+|.+
T Consensus 257 ~Tl-----~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~ 331 (395)
T PRK05967 257 RTM-----GIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLD 331 (395)
T ss_pred ccH-----HHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHH
Confidence 533 346777788888888888876 221 1 011355888988632 23445555
Q ss_pred HHHHhCCeEEecccCC------CC--------CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 430 MLLKEKGHYVQPINYP------TV--------PVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 430 ~Ll~~~GI~v~~~~~~------~~--------~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
.| +-..+.++-|... .. ....+.+|++++.. +.+.+++-|.+.++.
T Consensus 332 ~l-~l~~~~~slG~~~sLi~~~~~~~~~~~~~~~~~~liRlSvGlE----d~~dLi~Dl~~Al~~ 391 (395)
T PRK05967 332 AL-EIFGLGYSWGGYESLALHVKLGDRTVAKAPYAGPVIRLQIGLE----DVPDLKADLERGFAA 391 (395)
T ss_pred hC-CcceEccCCCCcceeeeeCCCChhHhhhccCCCCeEEEEeccC----CHHHHHHHHHHHHHh
Confidence 55 2212221111100 00 01235899999954 455555555555544
No 309
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=2.3e-19 Score=184.33 Aligned_cols=287 Identities=21% Similarity=0.245 Sum_probs=188.3
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...+++++++++.|.+++++++||++|+..++.++.+ +||+|+++.+.|..+...+...
T Consensus 57 ~pt~~~Le~~lA~l~g~~~~l~~ssG~~Ai~~al~al~~--~Gd~Vl~~~~~Y~~t~~~~~~~----------------- 117 (425)
T PRK06084 57 NPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTIAE--AGDNIVSVAKLYGGTYNLLAHT----------------- 117 (425)
T ss_pred CchHHHHHHHHHHHhCCCceeEehhHHHHHHHHHHHHhC--CCCEEEEeCCCcchHHHHHHHh-----------------
Confidence 355689999999999999999999999999999988876 9999999988887665332210
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 118 -------------------------------------------------------------------------------- 117 (425)
T PRK06084 118 -------------------------------------------------------------------------------- 117 (425)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
+...|.++.+++..|.+.+++.++ +++++|++++|+||+|.++++++|.++|+++|+++|+|+++
T Consensus 118 -----------l~~~gi~v~~~d~~d~e~le~ai~----~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~ 182 (425)
T PRK06084 118 -----------LPRIGIETRFAAHDDIAALEALID----ERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTV 182 (425)
T ss_pred -----------cccceeEEEEECCCCHHHHHHHhc----cCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCC
Confidence 011233444555556666666654 35889999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHH--HH---HH---------------------
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNF--ID---TI--------------------- 348 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~--~~---~l--------------------- 348 (514)
+.+... .....++|+++.|++|++++.| |+++.++.+ .+ .+
T Consensus 183 a~~~~~---------~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 253 (425)
T PRK06084 183 ATPVLC---------RPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGP 253 (425)
T ss_pred cccccC---------ChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcch
Confidence 855431 1113478999999999998654 666643321 00 00
Q ss_pred --------HhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcc-------------
Q psy16848 349 --------RSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPV------------- 406 (514)
Q Consensus 349 --------~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~------------- 406 (514)
..... .++..+++..++.+...|+.+ ..+.++..++...+.+.|++. ++..
T Consensus 254 ~~~~~~~~~~~~~--~~g~~l~~~~a~l~lrgl~tl-----~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~ 326 (425)
T PRK06084 254 AAFIGRCRVVPLR--NMGAALSPFNAFLILQGLETL-----ALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHE 326 (425)
T ss_pred HHHHHHHHHHHHH--hcCCCCCHHHHHHHHcCcCcH-----HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHH
Confidence 00011 124467777777666666543 357778888888899999876 2210
Q ss_pred -----ccC-CCcEEEEEeCCC-ccHHHHHHHHHHhCCeEEecccC------CC------CC--------CCCcEEEEEeC
Q psy16848 407 -----EHT-PSHIIPIKIGNP-ALNTKICDMLLKEKGHYVQPINY------PT------VP--------VGEEKIRLAPT 459 (514)
Q Consensus 407 -----~~~-~~~~~~i~l~~~-~~~~~~~~~Ll~~~GI~v~~~~~------~~------~~--------~~~~~iRl~~~ 459 (514)
... .++++.|.+... ....+|.+.| +--.+.++-|.. |. .+ ..++.+|+|++
T Consensus 327 ~~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~l-~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svG 405 (425)
T PRK06084 327 LARRYMGGKPASILSFGIKGGQAAGARFIDAL-KLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIG 405 (425)
T ss_pred HHHHhCCCCcceEEEEEecCCHHHHHHHHHhC-CcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEec
Confidence 011 255888888543 2234555555 222221211110 00 00 12579999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q psy16848 460 PFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 460 ~~~t~e~id~~~~~l~~~l~~ 480 (514)
+ ||.+.+++-|++.++.
T Consensus 406 l----Ed~~dLi~dl~~Al~~ 422 (425)
T PRK06084 406 I----EHIDDIIADLAQALDA 422 (425)
T ss_pred c----CCHHHHHHHHHHHHHh
Confidence 5 4556666666666553
No 310
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=2.2e-19 Score=184.32 Aligned_cols=289 Identities=17% Similarity=0.152 Sum_probs=187.8
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+..++++++++++.|.+++++++||+.|+..++.++.. +||+|+++...|.++...+.
T Consensus 68 ~p~~~~Le~~lA~l~g~~~av~~sSG~aAi~~al~all~--~Gd~Vv~~~~~y~~t~~~~~------------------- 126 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGVAALLLASGQAAETFAILNLAG--AGDHIVSSPRLYGGTYNLFH------------------- 126 (436)
T ss_pred CchHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhC--CCCEEEEeCCcchHHHHHHH-------------------
Confidence 466789999999999999999999999999999988866 99999999888877653211
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 127 -------------------------------------------------------------------------------- 126 (436)
T PRK07812 127 -------------------------------------------------------------------------------- 126 (436)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEec-CCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYR-HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEV 297 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea 297 (514)
..+...|.++++++ ..|.+.+++. .++++++|++++++||+|.+.|+++|.++|+++|+++|+|++
T Consensus 127 ---------~~l~~~Gi~v~~vdd~~d~e~l~~a----i~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t 193 (436)
T PRK07812 127 ---------YTLPKLGIEVSFVEDPDDLDAWRAA----VRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNT 193 (436)
T ss_pred ---------HHhhcCeEEEEEECCCCCHHHHHHh----CCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECC
Confidence 01112344555554 2234444433 346789999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHH-----------------------------
Q psy16848 298 HAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNF----------------------------- 344 (514)
Q Consensus 298 ~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~----------------------------- 344 (514)
++.+... .....++|+++.|++|++|+.| |.++....+
T Consensus 194 ~a~~~~~---------~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (436)
T PRK07812 194 IATPYLI---------RPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPA 264 (436)
T ss_pred CcccccC---------CchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhH
Confidence 9854321 1123479999999999998866 444432210
Q ss_pred -HHHHH-hhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcc--c------------
Q psy16848 345 -IDTIR-SYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPV--E------------ 407 (514)
Q Consensus 345 -~~~l~-~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~------------ 407 (514)
+.... ...... +..+++..+..+...|+. +..+.++..+++..+.+.|++. ++.. .
T Consensus 265 ~~~~~~~~~~~~~--G~~l~p~~a~l~~rgl~t-----L~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~ 337 (436)
T PRK07812 265 YALKARVQLLRDL--GSAISPFNAFLIAQGLET-----LSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERA 337 (436)
T ss_pred HHHHHHHHHHHhc--CCCCCHHHHHHHhcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHH
Confidence 00111 011111 345667666655555543 3457788888888999999886 2210 0
Q ss_pred -----cCCCcEEEEEeCCC-ccHHHHHHHHHHhCCeEEecccC------CCC--------------CCCCcEEEEEeCCC
Q psy16848 408 -----HTPSHIIPIKIGNP-ALNTKICDMLLKEKGHYVQPINY------PTV--------------PVGEEKIRLAPTPF 461 (514)
Q Consensus 408 -----~~~~~~~~i~l~~~-~~~~~~~~~Ll~~~GI~v~~~~~------~~~--------------~~~~~~iRl~~~~~ 461 (514)
...|+++.|++... .....|.+.| +--.+.++-|.. |.. ...++.+|+|+++
T Consensus 338 ~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l-~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl- 415 (436)
T PRK07812 338 KRLAPKGTGAVLSFELAGGVEAGKAFVNAL-TLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI- 415 (436)
T ss_pred HHhCcCCCceEEEEEecCCHHHHHHHHHhC-CcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc-
Confidence 11355888988542 2345566655 222222211110 000 0125689999994
Q ss_pred CCHHHHHHHHHHHHHHHHHcC
Q psy16848 462 HTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 462 ~t~e~id~~~~~l~~~l~~~~ 482 (514)
|+.+.+++-|++.++..+
T Consensus 416 ---Ed~~dli~dl~~Al~~~~ 433 (436)
T PRK07812 416 ---EGIDDILADLEAGFAAAK 433 (436)
T ss_pred ---CCHHHHHHHHHHHHHhhh
Confidence 456666666666666543
No 311
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=1.6e-18 Score=166.74 Aligned_cols=342 Identities=20% Similarity=0.210 Sum_probs=232.2
Q ss_pred eeeec-ccCCCCCChhHHHHHHHHHH-HhCCCCCCcCcccCc---chHHHHHHHHHHhHcCCCcE-EEEeccccccccch
Q psy16848 19 VTCRL-SSVQYKVPKGGRKCLGEALE-KFGTGAGGTRNISGN---SLFHEKLEEDVAKLHQKEAG-LVFTSCYVANDSTL 92 (514)
Q Consensus 19 ~~~d~-~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~la~~~~~~~~-i~~~sGt~a~~~~l 92 (514)
..|.+ +|-+| ..|.+.++.-..+. +|+.++++.+++.|. ++......++..++||.+++ +-..||++||++++
T Consensus 27 ~~ieLIASEN~-~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~ 105 (413)
T COG0112 27 EHIELIASENF-TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVY 105 (413)
T ss_pred hceeeeecccc-CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHHHH
Confidence 34555 44444 45888888887776 788888888888775 33333445778888999986 55789999999999
Q ss_pred hhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhh
Q psy16848 93 FTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEV 172 (514)
Q Consensus 93 ~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (514)
.++.+ |||+|+--+..|..-+.-....+..-.+
T Consensus 106 ~All~--pGDtimgm~l~~GGHltHg~~v~~sG~~--------------------------------------------- 138 (413)
T COG0112 106 LALLQ--PGDTIMGLDLSHGGHLTHGSPVNFSGKL--------------------------------------------- 138 (413)
T ss_pred HHHcC--CCCeEecccCCCCCcccCCCCCCcccee---------------------------------------------
Confidence 99977 9999998777776544211000000000
Q ss_pred hhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec------CCChh
Q psy16848 173 SHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR------HNDVN 246 (514)
Q Consensus 173 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~------~~d~~ 246 (514)
-+.+.++ .-|++
T Consensus 139 --------------------------------------------------------------~~~v~Y~vd~et~~IDyD 156 (413)
T COG0112 139 --------------------------------------------------------------FNVVSYGVDPETGLIDYD 156 (413)
T ss_pred --------------------------------------------------------------EEeEecccccccCccCHH
Confidence 0122222 12677
Q ss_pred HHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcC
Q psy16848 247 HLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGT 326 (514)
Q Consensus 247 ~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S 326 (514)
.+++..++. ++|+|+.-.- -.-...|+++++++|++.|.+|++|.+|-.|.... +. +......+|++++|
T Consensus 157 ~~~k~a~e~---kPK~ii~G~S--aY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~---G~--~p~P~~~AdvVTtT 226 (413)
T COG0112 157 EVEKLAKEV---KPKLIIAGGS--AYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAG---GV--HPNPLPHADVVTTT 226 (413)
T ss_pred HHHHHHHHh---CCCEEEECcc--ccccccCHHHHHHHHHHhCceEEehHHHHHHHHhc---cc--CCCCCCccceEeCC
Confidence 777777765 4677775432 22356679999999999999999999999776521 11 11113358999999
Q ss_pred Ccccc-cCCCeEEEecH-HHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCC
Q psy16848 327 LGKAF-GNIGGYIVGTK-NFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGF 404 (514)
Q Consensus 327 ~sK~l-g~~GG~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 404 (514)
.||++ |+.||++.++. ++.+.+...-.+...+ +.....+++-.-++....+...++..+++.++++.|.+.|.+.|+
T Consensus 227 THKTlrGPrGG~Il~~~eel~kkin~aVFPg~qg-gpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~ 305 (413)
T COG0112 227 THKTLRGPRGGIILTNDEELAKKINSAVFPGLQG-GPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGF 305 (413)
T ss_pred cccCCCCCCceEEEeccHHHHHHhhhhcCCccCC-ChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999 77889998884 8888887644333211 222223333344455444667788899999999999999999999
Q ss_pred ccccC--CCcEEEEEeCC-CccHHHHHHHHHHhCCeEEecccCCCCC---CCCcEEEEEeC----CCCCHHHHHHHHHHH
Q psy16848 405 PVEHT--PSHIIPIKIGN-PALNTKICDMLLKEKGHYVQPINYPTVP---VGEEKIRLAPT----PFHTREMIDKFVTDL 474 (514)
Q Consensus 405 ~~~~~--~~~~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~~~~~~~~~---~~~~~iRl~~~----~~~t~e~id~~~~~l 474 (514)
+++.. ..+++.+.+.+ +....+....| .+.||.+..-.-|+.+ -.++.||+..+ ..+.++|++++.+.|
T Consensus 306 ~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L-~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I 384 (413)
T COG0112 306 KVVSGGTDNHLVLVDLRSKGLTGKKAEAAL-ERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLI 384 (413)
T ss_pred eEecCCccceEEEEEcccCCCCHHHHHHHH-HHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHH
Confidence 98753 45677777763 23344444444 7999999754444432 23678999765 456688999999999
Q ss_pred HHHHHHcC
Q psy16848 475 LAVWKSLD 482 (514)
Q Consensus 475 ~~~l~~~~ 482 (514)
.+++...+
T Consensus 385 ~~vl~~~~ 392 (413)
T COG0112 385 ADVLDGLK 392 (413)
T ss_pred HHHHhccc
Confidence 99988765
No 312
>PLN02271 serine hydroxymethyltransferase
Probab=99.85 E-value=9.9e-19 Score=178.67 Aligned_cols=331 Identities=15% Similarity=0.127 Sum_probs=219.3
Q ss_pred ChhHHHHHHHHHH-HhCCCCCCcCcccCcchHHHH----HHHHHHhHcCCCc----E-EEEeccccccccchhhccccCC
Q psy16848 31 PKGGRKCLGEALE-KFGTGAGGTRNISGNSLFHEK----LEEDVAKLHQKEA----G-LVFTSCYVANDSTLFTLGKMIP 100 (514)
Q Consensus 31 ~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~la~~~~~~~----~-i~~~sGt~a~~~~l~~l~~~~~ 100 (514)
.|.+.+++...+. +|+.++++.+++.|. +..++ +.++..++|+.++ + +-..||+.||.+++.++.+ |
T Consensus 161 S~av~~algS~ltnkYaEG~pG~Ryy~G~-~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~--P 237 (586)
T PLN02271 161 CRAVMEALGSHLTNKYSEGMPGARYYTGN-QYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLL--P 237 (586)
T ss_pred CHHHHHHhcCcccccCCCCCCCCcCCCCC-hhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcC--C
Confidence 4777777766665 577777777777665 33344 4466777788665 2 4467999999999999976 9
Q ss_pred CceEEecCccchhhhhhhhcC--CCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCc
Q psy16848 101 GLHYISDAGNHASMIQGIRNS--SAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGA 178 (514)
Q Consensus 101 gd~v~~~~~~h~~~~~~~~~~--~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (514)
||+|+.-+..|...+...... +.. +.+.|.+
T Consensus 238 GD~IL~ldl~~GGHlshg~~~~~g~~--------------------------vs~sG~~--------------------- 270 (586)
T PLN02271 238 GDRIMGLDSPSGGHMSHGYYTPGGKK--------------------------VSGASIF--------------------- 270 (586)
T ss_pred CCEEEEecCCCCCchhcccccccccc--------------------------cccccce---------------------
Confidence 999999888777665321100 000 0000000
Q ss_pred eEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec------CCChhHHHHHH
Q psy16848 179 LTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR------HNDVNHLTQVL 252 (514)
Q Consensus 179 ~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~------~~d~~~l~~~l 252 (514)
.+.++++ ..|++.+++..
T Consensus 271 --------------------------------------------------------~~~vpY~~d~~~g~IDyd~lek~a 294 (586)
T PLN02271 271 --------------------------------------------------------FESLPYKVNPQTGYIDYDKLEEKA 294 (586)
T ss_pred --------------------------------------------------------EEEEEcccccccCccCHHHHHHHh
Confidence 0112221 12566666644
Q ss_pred hhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccc-
Q psy16848 253 ENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAF- 331 (514)
Q Consensus 253 ~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~l- 331 (514)
. ..++|+|++....++ ..+|+++++++|+++|+++++|.+|..|.....- .......+|++++|.||++
T Consensus 295 ~---~~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~-----~~sP~~~aDvvt~TTHKtLr 364 (586)
T PLN02271 295 L---DFRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKE-----CVNPFDYCDIVTSTTHKSLR 364 (586)
T ss_pred h---hcCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCc-----CCCCCcCCcEEEeCCcccCC
Confidence 3 356899999887777 6788999999999999999999999988763211 1111236899999999999
Q ss_pred cCCCeEEEecHH--------------------HHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHH
Q psy16848 332 GNIGGYIVGTKN--------------------FIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDI 391 (514)
Q Consensus 332 g~~GG~l~~~~~--------------------~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 391 (514)
|+.||+++.+++ +.+.+.....+. +..+.....+++...++.........+..+++.++
T Consensus 365 GPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPg-lqgGphn~~IAalAvalkea~~~efk~Ya~QVv~N 443 (586)
T PLN02271 365 GPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPS-LQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKN 443 (586)
T ss_pred CCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCc-cccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 777888776643 444444332221 12222333356666667766555667888999999
Q ss_pred HHHHHHHHHhCCCccccC--CCcEEEEEeCCCc-cHHHHHHHHHHhCCeEEecccCCCC--CCCCcEEEEEeC----CCC
Q psy16848 392 VAYLRNELIQIGFPVEHT--PSHIIPIKIGNPA-LNTKICDMLLKEKGHYVQPINYPTV--PVGEEKIRLAPT----PFH 462 (514)
Q Consensus 392 ~~~l~~~L~~~g~~~~~~--~~~~~~i~l~~~~-~~~~~~~~Ll~~~GI~v~~~~~~~~--~~~~~~iRl~~~----~~~ 462 (514)
.+.|.+.|.+.|++++.. ..+++.+.+.... +.....+.| ++.||.+..-..|.. +..++.+|+... ..+
T Consensus 444 AkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~L-e~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~ 522 (586)
T PLN02271 444 AQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVC-EMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGC 522 (586)
T ss_pred HHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHH-HHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCC
Confidence 999999999999998743 4567777775432 344444445 789999975443322 223578999765 456
Q ss_pred CHHHHHHHHHHHHHHHH
Q psy16848 463 TREMIDKFVTDLLAVWK 479 (514)
Q Consensus 463 t~e~id~~~~~l~~~l~ 479 (514)
.++|++++.+.|.++++
T Consensus 523 ~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 523 LESDFETIADFLLRAAQ 539 (586)
T ss_pred CcHHHHHHHHHHHHHHh
Confidence 67899999999998876
No 313
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.84 E-value=3.4e-19 Score=180.10 Aligned_cols=317 Identities=13% Similarity=0.101 Sum_probs=210.6
Q ss_pred CCChhHHHHHHHHHHHhCCCCCCcCcccC-----cchHHHHHHHHHHhHcCCC---cEEEEec-cccccccchhhccc-c
Q psy16848 29 KVPKGGRKCLGEALEKFGTGAGGTRNISG-----NSLFHEKLEEDVAKLHQKE---AGLVFTS-CYVANDSTLFTLGK-M 98 (514)
Q Consensus 29 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~la~~~~~~---~~i~~~s-Gt~a~~~~l~~l~~-~ 98 (514)
..++.|.+++.+.+..++ +.++..+..+ ..+.++++++.++++++.+ .++|+++ ||+++..++..+.. .
T Consensus 9 ~~p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~ 87 (355)
T cd00611 9 ALPEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDK 87 (355)
T ss_pred CCCHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCC
Confidence 347899999999998776 4443322222 1367889999999999952 3566655 88888888888752 2
Q ss_pred CCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCc
Q psy16848 99 IPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGA 178 (514)
Q Consensus 99 ~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (514)
.++|+|++....|.+. +-.+..|.++..++..+
T Consensus 88 ~~~~~i~~g~~~~~~~-~~a~~~g~~~~~~~~~~---------------------------------------------- 120 (355)
T cd00611 88 GTADYVVTGAWSAKAA-KEAKRYGGVVVIVAAKE---------------------------------------------- 120 (355)
T ss_pred CeEEEEECCHHHHHHH-HHHHhcCCCcEEEeccc----------------------------------------------
Confidence 4677887755554442 11222233322221100
Q ss_pred eEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCC
Q psy16848 179 LTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVK 258 (514)
Q Consensus 179 ~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~ 258 (514)
..++....+......++
T Consensus 121 ---------------------------------------------------------------~g~~~~~~~~~~~~~~~ 137 (355)
T cd00611 121 ---------------------------------------------------------------EGKYTKIPDVETWDLAP 137 (355)
T ss_pred ---------------------------------------------------------------ccCCCCCCCHhhcCCCC
Confidence 00010111111112346
Q ss_pred CceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-eE
Q psy16848 259 IPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG-GY 337 (514)
Q Consensus 259 ~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G-G~ 337 (514)
++++|.+++..|.||...+ ++++.||+++++|.++++|.. +.+.. ..++++.|.+|.+|++| |+
T Consensus 138 ~~~lV~~~h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~--------~idv~--~~~~~~ss~~K~lGP~G~g~ 202 (355)
T cd00611 138 DAAYVHYCSNETIHGVEFD-----EVPDTGGVPLVADMSSNILSR--------PIDVS--KFGVIYAGAQKNLGPAGVTV 202 (355)
T ss_pred CCCEEEEeCCcccccEEcc-----eecccCCCeEEEEccccccCC--------CCCHH--HhCEEEeecccccCCCceEE
Confidence 7899999999999999843 455569999999999998765 22221 23455567999999999 99
Q ss_pred EEecHHHHHHHHhhcCceE----------eccCCcHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhC-CCc
Q psy16848 338 IVGTKNFIDTIRSYAAGFI----------FTTSLPPTVLAGAREAIRILSSQ-EGVELRAKHQDIVAYLRNELIQI-GFP 405 (514)
Q Consensus 338 l~~~~~~~~~l~~~~~~~~----------~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~ 405 (514)
++.++++++++.+...... ...+.+.....++.++++++.+. +++++.++.+++.+++.+.|+++ |+.
T Consensus 203 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~ 282 (355)
T cd00611 203 VIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFY 282 (355)
T ss_pred EEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 9999998877654321110 01245666788999999999887 79999999999999999999999 752
Q ss_pred -cc-c--CCC-cEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 406 -VE-H--TPS-HIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 406 -~~-~--~~~-~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
.. . .+. .++.+.+++.....++.+.+ .++|+.+.++.. ..+.+|+|+..++|++||++++++|+++
T Consensus 283 ~~~~~~~~rs~~vvsf~~~~~~l~~~~~~~~-~r~G~~~~~~~~-----~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 283 RGPVDKRARSRMNVPFRLGKEELEKEFLKEA-EAAGMIGLKGHR-----SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred ccCCCHHHcCceEEEEEcCChhhhHHHHHHH-HHCCCcccCCCc-----ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 21 1 133 34777776531124554566 489997544432 1358999999999999999999999884
No 314
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=2.6e-19 Score=182.80 Aligned_cols=287 Identities=14% Similarity=0.136 Sum_probs=190.3
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...+||+.++++.|.++++.++||+.|+.+++.++++ +||+|+++.+.|.++...+.
T Consensus 60 nPtv~~lE~~la~leg~~~av~~~SG~aAi~~al~all~--~GD~VI~~~~~Y~~T~~~~~------------------- 118 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGVGAVATASGQAAIMLAVLNICS--SGDHLLCSSTVYGGTFNLFG------------------- 118 (432)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhcC--CCCEEEECCCchHHHHHHHH-------------------
Confidence 366899999999999999999999999999999988866 99999999999987764311
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 119 -------------------------------------------------------------------------------- 118 (432)
T PRK06702 119 -------------------------------------------------------------------------------- 118 (432)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCC-ChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHN-DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEV 297 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea 297 (514)
..+...|+++.+++.+ |.+.+++ ..+++|++|+++++.||++.+.++++|.++|+++|+++|+|++
T Consensus 119 ---------~~l~~~Gi~v~~vd~~~d~~~l~~----~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T 185 (432)
T PRK06702 119 ---------VSLRKLGIDVTFFNPNLTADEIVA----LANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNT 185 (432)
T ss_pred ---------HHHHHCCCEEEEECCCCCHHHHHH----hCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECC
Confidence 1122334555555432 4444433 4456799999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHH----------HH------------------
Q psy16848 298 HAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKN----------FI------------------ 345 (514)
Q Consensus 298 ~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~----------~~------------------ 345 (514)
++.... ...+..++||++.|++|.+++.+ |+++.... ++
T Consensus 186 ~~tP~~---------~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~ 256 (432)
T PRK06702 186 LATPYL---------CQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAA 256 (432)
T ss_pred CCchhh---------CChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchh
Confidence 862221 11224589999999999998744 66553211 11
Q ss_pred ---HHHH-hhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc-------------
Q psy16848 346 ---DTIR-SYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE------------- 407 (514)
Q Consensus 346 ---~~l~-~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~------------- 407 (514)
.... .....+ +..+++..+..+...|+.+ +.+.++..++...+.+.|++. .+..+
T Consensus 257 ~~~~~~~~~~~~~~--g~~~sp~~a~l~~rgL~Tl-----~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l 329 (432)
T PRK06702 257 AYIVKARVQLLRDY--GNCMSPFNAYISNIGLETL-----HLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSL 329 (432)
T ss_pred hHHHHHHHHHHHHc--cCCCCHHHHHHHHhccCcH-----HHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHH
Confidence 1111 111222 4578888888777777643 346777788888999999876 22211
Q ss_pred ------cCCCcEEEEEeCCC-ccHHHHHHHHHHhCCeEEecccC------CCC--------------CCCCcEEEEEeCC
Q psy16848 408 ------HTPSHIIPIKIGNP-ALNTKICDMLLKEKGHYVQPINY------PTV--------------PVGEEKIRLAPTP 460 (514)
Q Consensus 408 ------~~~~~~~~i~l~~~-~~~~~~~~~Ll~~~GI~v~~~~~------~~~--------------~~~~~~iRl~~~~ 460 (514)
...++++.|.+... ....+|++.| +--.+.++-|.. |.. ...++.+|+|++.
T Consensus 330 ~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l-~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl 408 (432)
T PRK06702 330 AQKYLKKGASGVLTFGIKGGLEAAKEFIANV-KLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI 408 (432)
T ss_pred HHHhCcCCCceEEEEEecCCHHHHHHHHHhC-ccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc
Confidence 11245888888632 2344555555 222222221110 000 0124689999994
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy16848 461 FHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 461 ~~t~e~id~~~~~l~~~l~~ 480 (514)
|+.|.+++-|++.++-
T Consensus 409 ----Ed~eDLi~Dl~~Al~~ 424 (432)
T PRK06702 409 ----EDVSDIIADLEAALVG 424 (432)
T ss_pred ----CCHHHHHHHHHHHHhc
Confidence 4566666666666553
No 315
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=4e-19 Score=182.65 Aligned_cols=289 Identities=18% Similarity=0.150 Sum_probs=188.6
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+..+++|++++++.|.+++++++||+.|+..++.++.+ +||+|++++..|.++...+..
T Consensus 63 ~p~~~~le~~lA~l~g~~~av~~sSGt~Al~~al~~ll~--~Gd~Vi~~~~~y~~t~~~~~~------------------ 122 (433)
T PRK08134 63 NPTVAVLEERVAALEGGVGAIATASGQAALHLAIATLMG--AGSHIVASSALYGGSHNLLHY------------------ 122 (433)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhC--CCCEEEEeCCccHHHHHHHHH------------------
Confidence 467899999999999999999999999999988888865 999999999999877533211
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 123 -------------------------------------------------------------------------------- 122 (433)
T PRK08134 123 -------------------------------------------------------------------------------- 122 (433)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
.+...|+++++++..|.+.+++.+ +++|++|++++++||+|.+.|+++|.++|+++|+++|+|.++
T Consensus 123 ----------~l~~~Gi~v~~vd~~d~~~l~~~i----~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~ 188 (433)
T PRK08134 123 ----------TLRRFGIETTFVKPGDIDGWRAAI----RPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTF 188 (433)
T ss_pred ----------HHhhCCeEEEEECCCCHHHHHHhc----CCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCC
Confidence 112345566666655555555544 457899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHH------------------------------
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNF------------------------------ 344 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~------------------------------ 344 (514)
+.+... .....++|+++.|.+|++++.| |+++....+
T Consensus 189 a~~~~~---------~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 259 (433)
T PRK08134 189 TTPYLL---------RPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVA 259 (433)
T ss_pred cccccC---------CchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchh
Confidence 865431 1123489999999999998766 554432110
Q ss_pred --HHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCc---c------------
Q psy16848 345 --IDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFP---V------------ 406 (514)
Q Consensus 345 --~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~---~------------ 406 (514)
....+. .....++..+++..++.+...|+. ++.+.++..++...+.+.|++. ++. +
T Consensus 260 ~~~~~~~~-~~~~~~G~~ls~~~A~l~~~gL~t-----l~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~ 333 (433)
T PRK08134 260 AFLLRARR-EGLRDFGACLSPMNAWQLLQGIET-----LPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALA 333 (433)
T ss_pred HHHHHHHH-HHHHhcCCCCCHHHHHHHhcCCCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHH
Confidence 000000 000111334566666655555543 3457777888888888888875 221 0
Q ss_pred ---c-cCCCcEEEEEeCCC-ccHHHHHHHHHHhCCeEEecccC------CC------CC--------CCCcEEEEEeCCC
Q psy16848 407 ---E-HTPSHIIPIKIGNP-ALNTKICDMLLKEKGHYVQPINY------PT------VP--------VGEEKIRLAPTPF 461 (514)
Q Consensus 407 ---~-~~~~~~~~i~l~~~-~~~~~~~~~Ll~~~GI~v~~~~~------~~------~~--------~~~~~iRl~~~~~ 461 (514)
. ...++++.|.+... .....|++.| +--.+..+-|.. |. .+ ..++.||+|+++.
T Consensus 334 ~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l-~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGlE 412 (433)
T PRK08134 334 KRLLPRGAGSVFSFDLKGGRAAGRKFIESL-KLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGLE 412 (433)
T ss_pred HHhCCCCCceEEEEEecCCHHHHHHHHHhC-CcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEeccC
Confidence 0 12356888998642 3344555555 222222111110 00 00 1257899999954
Q ss_pred CCHHHHHHHHHHHHHHHHHc
Q psy16848 462 HTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 462 ~t~e~id~~~~~l~~~l~~~ 481 (514)
+.+.+++-|++.+++.
T Consensus 413 ----~~~dli~dl~~Al~~~ 428 (433)
T PRK08134 413 ----DADDLIDDLKRALKAA 428 (433)
T ss_pred ----CHHHHHHHHHHHHHhh
Confidence 4555566666655543
No 316
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=3.6e-19 Score=180.65 Aligned_cols=242 Identities=16% Similarity=0.144 Sum_probs=167.4
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+...++++.++++.|.+.+++++||+.++..++ .+.+ +||+|+++.+.|.+....+.
T Consensus 49 ~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~-~~l~--~Gd~Viv~~~~y~~~~~~~~------------------- 106 (377)
T PRK07671 49 NPTRAALEELIAVLEGGHAGFAFGSGMAAITAVM-MLFS--SGDHVILTDDVYGGTYRVMT------------------- 106 (377)
T ss_pred ChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHH-HHhC--CCCEEEECCCccchHHHHHH-------------------
Confidence 4668999999999999999999999988766554 4544 99999999998876542211
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 107 -------------------------------------------------------------------------------- 106 (377)
T PRK07671 107 -------------------------------------------------------------------------------- 106 (377)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
..+...|+++++++..|.+.+++.+ ++++++|++++|+||+|.+.++++|.++|+++|+++|+|++|
T Consensus 107 ---------~~~~~~G~~v~~v~~~d~~~l~~ai----~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~ 173 (377)
T PRK07671 107 ---------KVLNRFGIEHTFVDTSNLEEVEEAI----RPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTF 173 (377)
T ss_pred ---------HHHhcCCeEEEEECCCCHHHHHHhc----CCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCC
Confidence 1112335556666655555555544 346899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
..+.... . ...+.|++++|++|++++. ||+++. ++++.+.+...+... +...++..+..+...+
T Consensus 174 ~~~~~~~-------p--~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~--g~~~~~~~a~l~~~~l 242 (377)
T PRK07671 174 MTPYWQS-------P--ISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNST--GGILGPQDSWLLLRGL 242 (377)
T ss_pred CccccCC-------h--hhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhh--cCCCCHHHHHHHHcCc
Confidence 7433211 1 1236799999999999753 376665 567777776555433 3345666665555444
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc------------------cCCCcEEEEEeCCCccHHHHHHHH
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE------------------HTPSHIIPIKIGNPALNTKICDML 431 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~------------------~~~~~~~~i~l~~~~~~~~~~~~L 431 (514)
+. +...+++..++...+.+.|++. ++..+ ...++++.|.+.+......|.+.|
T Consensus 243 ~t-----l~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l 314 (377)
T PRK07671 243 KT-----LGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSEETANKVLERL 314 (377)
T ss_pred Ch-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCCHHHHHHHHHhC
Confidence 32 3346777788888889988876 22110 113558889884333344454444
No 317
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.84 E-value=3.4e-19 Score=180.43 Aligned_cols=279 Identities=17% Similarity=0.136 Sum_probs=186.7
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+-..+++++++++. .+++++++||++|+..++.++.+ +||+|+++.+.|......++
T Consensus 50 ~p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~l~all~--~Gd~Vl~~~~~y~~~~~~~~------------------- 107 (366)
T PRK07582 50 NPTWRALEAALGELE-GAEALVFPSGMAAITAVLRALLR--PGDTVVVPADGYYQVRALAR------------------- 107 (366)
T ss_pred CccHHHHHHHHHHHc-CCCEEEECCHHHHHHHHHHHhcC--CCCEEEEeCCCcHhHHHHHH-------------------
Confidence 355789999999999 67889999999998888888765 99999998888866542211
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 108 -------------------------------------------------------------------------------- 107 (366)
T PRK07582 108 -------------------------------------------------------------------------------- 107 (366)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
..+...|++++.++..+... ...++++++++++|+||+|.+.++++|.++|+++|+++|+|++|
T Consensus 108 ---------~~l~~~G~~v~~v~~~~~~~-------~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~ 171 (366)
T PRK07582 108 ---------EYLAPLGVTVREAPTAGMAE-------AALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTT 171 (366)
T ss_pred ---------HHHhcCeEEEEEECCCChHH-------HhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCC
Confidence 01122345555555332211 11246899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccC-CC---eEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN-IG---GYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~-~G---G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
.... + ..+. ..++|++++|++|++++ .| ||+++ ++++.+.+....... +..+++..+..+...+
T Consensus 172 ~~~~-~-----~~p~---~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~--g~~~~~~~a~l~~r~l 240 (366)
T PRK07582 172 ATPL-G-----QRPL---ELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLA--GAIPGPFEAWLAHRSL 240 (366)
T ss_pred CCcc-c-----cCch---hcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHh--CCCCCHHHHHHHHhcc
Confidence 6221 1 1111 23679999999999965 33 88886 477877776554333 3356677766666655
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc-------cC-----------CCcEEEEEeCCCccHHHHHHHHHHh
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE-------HT-----------PSHIIPIKIGNPALNTKICDMLLKE 434 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-------~~-----------~~~~~~i~l~~~~~~~~~~~~Ll~~ 434 (514)
+.+ +.+.++..++...+.+.|++. .+..+ .+ .++++.+.+++ ..+..+.+ +.
T Consensus 241 ~tl-----~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~---~~~~~~~~-~~ 311 (366)
T PRK07582 241 GTL-----GLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELAD---AAAAERFV-AA 311 (366)
T ss_pred ccH-----HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCC---HHHHHHHH-Hh
Confidence 533 345677788888899999876 22211 11 35688999863 33444444 45
Q ss_pred CCeEEecccCCC------------CCCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q psy16848 435 KGHYVQPINYPT------------VPVGEEKIRLAPTPFHTREMIDKFVTDLL 475 (514)
Q Consensus 435 ~GI~v~~~~~~~------------~~~~~~~iRl~~~~~~t~e~id~~~~~l~ 475 (514)
.++.....++-. ....++.||+|++....++.++.+.++|+
T Consensus 312 l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 312 SRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred CCcceecccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 666543111100 00124689999998776666666666654
No 318
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.84 E-value=4.8e-19 Score=180.40 Aligned_cols=207 Identities=16% Similarity=0.130 Sum_probs=156.2
Q ss_pred ceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC-CC-eE
Q psy16848 260 PKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN-IG-GY 337 (514)
Q Consensus 260 ~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~-~G-G~ 337 (514)
++.|.++++.|.||...|+++|.+ +++|+++++|.++++|.. +.+. . +.|++++|.+|++++ +| |+
T Consensus 137 ~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~--------pidv-~-~iD~~~~s~~K~l~~P~G~g~ 204 (378)
T PRK03080 137 DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFAL--------PLDW-S-KLDVYTFSWQKVLGGEGGHGM 204 (378)
T ss_pred CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccC--------CCCH-H-HCcEEEEehhhhCCCCCceEE
Confidence 456899999999999999999999 889999999999998775 2332 1 379999999999954 78 99
Q ss_pred EEecHHHHHHHHhhcCce-----------------Ee---c-cCCcHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHH
Q psy16848 338 IVGTKNFIDTIRSYAAGF-----------------IF---T-TSLPPTVLAGAREAIRILSSQ-EGVELRAKHQDIVAYL 395 (514)
Q Consensus 338 l~~~~~~~~~l~~~~~~~-----------------~~---~-~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l 395 (514)
++.+++.++.+.....++ .+ + .+.+.....++.++++++.+. +++++.++.+++.+++
T Consensus 205 l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l 284 (378)
T PRK03080 205 AILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVL 284 (378)
T ss_pred EEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 999999988876532110 00 0 123344556678899988776 7899999999999999
Q ss_pred HHHHHhCC-Ccccc--C--CC-cEEEEEeCCC--ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHH
Q psy16848 396 RNELIQIG-FPVEH--T--PS-HIIPIKIGNP--ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMI 467 (514)
Q Consensus 396 ~~~L~~~g-~~~~~--~--~~-~~~~i~l~~~--~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~i 467 (514)
.+.|++++ +.+.. + .+ .++.+.+++. ....++...++ ++|+.+..+.++. ..+.+|++++.++|++|+
T Consensus 285 ~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~-~~~i~v~~g~~~~---~~~~vRis~~~~~t~~di 360 (378)
T PRK03080 285 YDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLL-RENGAVDIEPYRD---APNGLRIWCGPTVEPADV 360 (378)
T ss_pred HHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHH-HcCCeeccccccC---CCCcEEEecCCCCCHHHH
Confidence 99999884 44432 1 23 3677777651 12345677775 6788887654421 246899999999999999
Q ss_pred HHHHHHHHHHHHHcC
Q psy16848 468 DKFVTDLLAVWKSLD 482 (514)
Q Consensus 468 d~~~~~l~~~l~~~~ 482 (514)
++++++|++++++++
T Consensus 361 ~~l~~al~~~~~~~~ 375 (378)
T PRK03080 361 EALTPWLDWAFERLK 375 (378)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988764
No 319
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=8.5e-19 Score=180.34 Aligned_cols=287 Identities=17% Similarity=0.184 Sum_probs=188.2
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+....|++.++++.|.+++++++||+.|+..++.++.. +||+|+++.+.|......+
T Consensus 63 ~p~~~~Le~~lA~leg~~~al~~~sG~~Ai~~al~~ll~--~GD~Vlv~~~~y~~t~~~~-------------------- 120 (431)
T PRK08248 63 NPTTDVFEKRIAALEGGIGALAVSSGQAAITYSILNIAS--AGDEIVSSSSLYGGTYNLF-------------------- 120 (431)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhC--CCCEEEEccCchhhHHHHH--------------------
Confidence 456789999999999999999999999999989888866 9999999998887654221
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 121 -------------------------------------------------------------------------------- 120 (431)
T PRK08248 121 -------------------------------------------------------------------------------- 120 (431)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
...+...|+++++++..|.+.+++.++ +++++|++++++||+|.+.|+++|.++|+++|+++|+|+++
T Consensus 121 --------~~~~~~~Gv~v~~vd~~d~e~l~~ai~----~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~ 188 (431)
T PRK08248 121 --------AHTLPKLGITVKFVDPSDPENFEAAIT----DKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTF 188 (431)
T ss_pred --------HHHHHhCCEEEEEECCCCHHHHHHhcC----CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCC
Confidence 112234456666666656666555553 45899999999999999999999999999999999999998
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHHH-----------------------H-----
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNFI-----------------------D----- 346 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~-----------------------~----- 346 (514)
+.+.. ..+ ...++|+++.|++|++|+.| |+++.+.+.. +
T Consensus 189 a~~~~------~~p---l~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (431)
T PRK08248 189 ASPYL------LRP---IEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEA 259 (431)
T ss_pred Ccccc------CCh---hHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchh
Confidence 73321 111 24579999999999998766 5455433210 0
Q ss_pred -----HHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcc--c-----------
Q psy16848 347 -----TIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPV--E----------- 407 (514)
Q Consensus 347 -----~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~----------- 407 (514)
........ .+..+++..+..+...|+. ++.+.++..+++..+.+.|++. ++.. .
T Consensus 260 ~~~~~~~~~~~~~--~G~~l~p~~a~l~~rgl~t-----l~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~ 332 (431)
T PRK08248 260 AYITKARVQLLRD--LGAALSPFNSFLLLQGLET-----LHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYEL 332 (431)
T ss_pred hHHHHHHHHHHHh--cCCCCCHHHHHHHhcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHH
Confidence 00001111 1345666666655555543 3357788888899999999887 3221 0
Q ss_pred ------cCCCcEEEEEeCCC-ccHHHHHHHHHHhCCeEEecccC------CCC--------------CCCCcEEEEEeCC
Q psy16848 408 ------HTPSHIIPIKIGNP-ALNTKICDMLLKEKGHYVQPINY------PTV--------------PVGEEKIRLAPTP 460 (514)
Q Consensus 408 ------~~~~~~~~i~l~~~-~~~~~~~~~Ll~~~GI~v~~~~~------~~~--------------~~~~~~iRl~~~~ 460 (514)
...|+++.|.+.+. .....|++.| +--.+.++-|.. |.. ...++.+|+|+++
T Consensus 333 ~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l-~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl 411 (431)
T PRK08248 333 AKKYLPKGQGAILTFGIKGGVEAGKKLIDSV-KLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGT 411 (431)
T ss_pred HHHhCcCCCceEEEEEecCCHHHHHHHHHhC-CcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEecc
Confidence 11255888988543 2344555555 222222221110 100 0125789999995
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy16848 461 FHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 461 ~~t~e~id~~~~~l~~~l~~ 480 (514)
|+.+.+++-|.++++.
T Consensus 412 ----Ed~~dL~~Dl~~Al~~ 427 (431)
T PRK08248 412 ----EAIDDILDDLRQAIRQ 427 (431)
T ss_pred ----CCHHHHHHHHHHHHHh
Confidence 4455556666665554
No 320
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=8.7e-19 Score=180.04 Aligned_cols=287 Identities=15% Similarity=0.147 Sum_probs=188.2
Q ss_pred cchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHH
Q psy16848 58 NSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLT 137 (514)
Q Consensus 58 ~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~ 137 (514)
..+..+++++.++++.|.+++++++||+.|+.+++.++.+ +||+|+++...|.++...+
T Consensus 67 ~~pt~~~le~~la~l~g~~~~v~fsSG~~Ai~~al~~ll~--~Gd~VI~~~~~y~~t~~~~------------------- 125 (437)
T PRK05613 67 TNPTVEALENRIASLEGGVHAVAFASGQAAETAAILNLAG--AGDHIVTSPRLYGGTETLF------------------- 125 (437)
T ss_pred cChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcC--CCCEEEECCCccHHHHHHH-------------------
Confidence 3577899999999999999999999999998888877755 9999999999998874221
Q ss_pred HHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccC
Q psy16848 138 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVN 217 (514)
Q Consensus 138 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~ 217 (514)
T Consensus 126 -------------------------------------------------------------------------------- 125 (437)
T PRK05613 126 -------------------------------------------------------------------------------- 125 (437)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceeeecchHHHHhhCCCCEEEec-CCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEec
Q psy16848 218 PEVAIHASMIQGIRNSSAPKIIYR-HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDE 296 (514)
Q Consensus 218 ~~v~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~De 296 (514)
...+...|.++++++ ..|.+.+++. .+++|++|+++++.||+|.+.|+++|.++|+++|+++|+|.
T Consensus 126 ---------~~~l~~~Gi~v~~vd~~~d~e~l~~~----l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~ 192 (437)
T PRK05613 126 ---------LVTLNRLGIEVTFVENPDDPESWQAA----VQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDN 192 (437)
T ss_pred ---------HHHHHhcCeEEEEECCCCCHHHHHHh----CCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEEC
Confidence 112233455666665 3344444443 45568999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHHH---------------------------
Q psy16848 297 VHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNFI--------------------------- 345 (514)
Q Consensus 297 a~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~--------------------------- 345 (514)
+++.+.. ......++|++++|++|++++.| |+++.+.++.
T Consensus 193 t~a~g~~---------~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (437)
T PRK05613 193 TIATAAL---------VRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYA 263 (437)
T ss_pred CCccccc---------cChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCcccccccccc
Confidence 9985542 11123478999999999998753 7666432210
Q ss_pred ---------HHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccc--------
Q psy16848 346 ---------DTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVE-------- 407 (514)
Q Consensus 346 ---------~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-------- 407 (514)
+........ ++..+++..+..+...|+.+ ..+.++..+++..+.+.|++. ++..+
T Consensus 264 ~~~~~~~~~~~~~~~~~~--~G~~~~p~~a~l~~rgl~TL-----~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~ 336 (437)
T PRK05613 264 DLGAPAFGLKARAGLLRD--TGATLSPFNAWVTAQGLDTL-----SLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDS 336 (437)
T ss_pred ccchHHHHHHHHHHHHHh--cCCCCCHHHHHHHHcccCcH-----HHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCC
Confidence 000011111 24466777777666655533 346778888899999999886 22100
Q ss_pred -----------cCCCcEEEEEeCCC-ccHHHHHHHHHHhCCeEEecccC------CCCC--------------CCCcEEE
Q psy16848 408 -----------HTPSHIIPIKIGNP-ALNTKICDMLLKEKGHYVQPINY------PTVP--------------VGEEKIR 455 (514)
Q Consensus 408 -----------~~~~~~~~i~l~~~-~~~~~~~~~Ll~~~GI~v~~~~~------~~~~--------------~~~~~iR 455 (514)
...|+++.|.+... .....|++.| +--.+..+-|.. |... ..++.||
T Consensus 337 p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l-~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liR 415 (437)
T PRK05613 337 PWYATKEKLGLKYTGSVLSFDIKGGKDEAWAFIDAL-KLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVR 415 (437)
T ss_pred ccHHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhC-CcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEE
Confidence 01255888988632 3344555555 222222211110 1100 1257899
Q ss_pred EEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 456 LAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 456 l~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
+|+++ |+.+.+++-|++.++
T Consensus 416 lsvGl----E~~~dLi~Dl~~Al~ 435 (437)
T PRK05613 416 LSVGI----EDIDDIIADLEGGFA 435 (437)
T ss_pred EEecc----CCHHHHHHHHHHHHh
Confidence 99995 445556666665554
No 321
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.83 E-value=2.2e-18 Score=172.98 Aligned_cols=202 Identities=14% Similarity=0.132 Sum_probs=154.2
Q ss_pred CCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-e
Q psy16848 258 KIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG-G 336 (514)
Q Consensus 258 ~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G-G 336 (514)
+++++|.+++..|.||...+ ++++.+++++++|.++++|.. +.+.. +.|++++|.+|++|++| |
T Consensus 129 ~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~--------~id~~--~~d~~~~ssqK~lgP~Glg 193 (349)
T TIGR01364 129 EDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSR--------PIDVS--KFGLIYAGAQKNIGPAGLT 193 (349)
T ss_pred CCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCc--------cCCHH--HccEEEEecccccCCCceE
Confidence 46889999999999999876 677778999999999997764 22221 34699999999999999 9
Q ss_pred EEEecHHHHHHHHhhcCceE----------eccCCcHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhC-CC
Q psy16848 337 YIVGTKNFIDTIRSYAAGFI----------FTTSLPPTVLAGAREAIRILSSQ-EGVELRAKHQDIVAYLRNELIQI-GF 404 (514)
Q Consensus 337 ~l~~~~~~~~~l~~~~~~~~----------~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~ 404 (514)
+++.+++.++.+.+....+. ...+++.....++.++|+++.++ +++++.++.+++.+++.+.|+++ |+
T Consensus 194 ~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl 273 (349)
T TIGR01364 194 VVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGF 273 (349)
T ss_pred EEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 99999998887644211110 01255677889999999999888 69999999999999999999999 55
Q ss_pred ccc-c---CCC-cEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 405 PVE-H---TPS-HIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 405 ~~~-~---~~~-~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
... . .++ .++.+.+++.....++.+.+ .++|+.+.++.. ..+.+|+|+..++|.|||++++++|+++.+
T Consensus 274 ~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~-~~~Gi~~~~~~~-----~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 274 YRNPVDPRNRSRMNVVFTLGNEELEKRFLKEA-EERGLVSLKGHR-----SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred eccCCCHHHcCCeEEEEecCChhHhHHHHHHH-HHCCCcccCCcc-----ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 332 1 133 35667776532235666677 489997665543 135899999999999999999999999765
Q ss_pred H
Q psy16848 480 S 480 (514)
Q Consensus 480 ~ 480 (514)
+
T Consensus 348 ~ 348 (349)
T TIGR01364 348 K 348 (349)
T ss_pred h
Confidence 4
No 322
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.83 E-value=1.9e-18 Score=174.36 Aligned_cols=201 Identities=12% Similarity=0.083 Sum_probs=155.2
Q ss_pred CCceEEEEecCCCCCcccc-CHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-
Q psy16848 258 KIPKLVAFETVHSMTGAIC-PLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG- 335 (514)
Q Consensus 258 ~~~~~vv~~~~~nptG~~~-~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G- 335 (514)
+++++|.+++..+.||... ++++| +|+++++|.++++|.. +.+.. +.|++++|.+|++|++|
T Consensus 140 ~~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~--------~idv~--~~d~~~~ssqK~lgP~Gl 203 (360)
T PRK05355 140 DDAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSR--------PIDVS--KFGLIYAGAQKNIGPAGL 203 (360)
T ss_pred CCCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCc--------cCCHH--HccEEEEeccccccCCce
Confidence 3578999999999999998 67666 8999999999998764 22221 23699999999999999
Q ss_pred eEEEecHHHHHHHHhhcCc----------eEeccCCcHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhCCC
Q psy16848 336 GYIVGTKNFIDTIRSYAAG----------FIFTTSLPPTVLAGAREAIRILSSQ-EGVELRAKHQDIVAYLRNELIQIGF 404 (514)
Q Consensus 336 G~l~~~~~~~~~l~~~~~~----------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~ 404 (514)
|+++.++++++.+.+.... ...-.+.|.....++.++|+++.++ +++++.++.+++.+++.+.|+++++
T Consensus 204 g~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~ 283 (360)
T PRK05355 204 TIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDF 283 (360)
T ss_pred EEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999998877652110 0011356778889999999999888 7999999999999999999999864
Q ss_pred c-c-cc--CCC-cEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 405 P-V-EH--TPS-HIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 405 ~-~-~~--~~~-~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
- . .. .+. .++.+.+++.....++.+.+. ++|+.+.++.. ..+.+|+|+..++|.+||+++++.|+++++
T Consensus 284 ~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~-~~Gi~~~~~~~-----~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 284 YRNPVAPEDRSRMNVPFTLADEELDKKFLAEAK-AAGLVGLKGHR-----SVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred cccCCChhhcCCcEEEEEcCChHHHHHHHHHHH-HCCCcccCCCC-----ccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 2 1 11 133 357788776534456667774 89999854432 236899999999999999999999999876
Q ss_pred H
Q psy16848 480 S 480 (514)
Q Consensus 480 ~ 480 (514)
+
T Consensus 358 ~ 358 (360)
T PRK05355 358 R 358 (360)
T ss_pred h
Confidence 4
No 323
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.83 E-value=1.7e-18 Score=174.43 Aligned_cols=285 Identities=19% Similarity=0.204 Sum_probs=191.6
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+....++++++++.|.+.+++++||..|+..++.++.+ +||+|++....|..+..-++
T Consensus 54 nPt~~~le~~la~Le~g~~a~~~~SGmaAi~~~l~~ll~--~Gd~iv~~~~~Y~~t~~~~~------------------- 112 (386)
T PF01053_consen 54 NPTVRALEQRLAALEGGEDALLFSSGMAAISAALLALLK--PGDHIVASDDLYGGTYRLLE------------------- 112 (386)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHS---TTBEEEEESSSSHHHHHHHH-------------------
T ss_pred cccHHHHHHHHHHhhcccceeeccchHHHHHHHHHhhcc--cCCceEecCCccCcchhhhh-------------------
Confidence 577899999999999999999999999999889988877 99999999988877763221
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 113 -------------------------------------------------------------------------------- 112 (386)
T PF01053_consen 113 -------------------------------------------------------------------------------- 112 (386)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcC-CEEEEecc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHG-ALTFVDEV 297 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~g-v~li~Dea 297 (514)
..+...|.++.+++..|.+.+++.+++ ++++|++++|.||+..+.|+++|+++|+++| +++++|+.
T Consensus 113 ---------~~l~~~gv~v~~~d~~d~~~l~~~l~~----~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT 179 (386)
T PF01053_consen 113 ---------ELLPRFGVEVTFVDPTDLEALEAALRP----NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNT 179 (386)
T ss_dssp ---------HCHHHTTSEEEEESTTSHHHHHHHHCT----TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECT
T ss_pred ---------hhhcccCcEEEEeCchhHHHHHhhccc----cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeecc
Confidence 123345667777777788888888865 6899999999999999999999999999998 99999999
Q ss_pred ccccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEec--HHHHHHHHhhcCceEeccCCcHHHHHHHHH
Q psy16848 298 HAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGT--KNFIDTIRSYAAGFIFTTSLPPTVLAGARE 371 (514)
Q Consensus 298 ~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~ 371 (514)
.+-+.. ...+..++|+++.|.+|.+++.+ |+++.+ +++.+.++.....+ +..+++..+..+..
T Consensus 180 ~atp~~---------~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~--G~~~~p~da~ll~r 248 (386)
T PF01053_consen 180 FATPYN---------QNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLL--GATLSPFDAWLLLR 248 (386)
T ss_dssp TTHTTT---------C-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHH--T-B--HHHHHHHHH
T ss_pred ccceee---------eccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhc--CccchHHHHHHHhc
Confidence 983321 12234579999999999998744 888765 47777776554443 44566766666666
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCc-cc-----------------cCCCcEEEEEeCCCc-cHHHHHHHH
Q psy16848 372 AIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFP-VE-----------------HTPSHIIPIKIGNPA-LNTKICDML 431 (514)
Q Consensus 372 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-----------------~~~~~~~~i~l~~~~-~~~~~~~~L 431 (514)
.++.+ .-+.++..+++..+.+.|++. .+. +. ...++++.|.+.+.. ....|.+.|
T Consensus 249 gl~Tl-----~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l 323 (386)
T PF01053_consen 249 GLRTL-----PLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDAL 323 (386)
T ss_dssp HHTTH-----HHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-
T ss_pred CCCcH-----HHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhh
Confidence 55533 347788888899999999887 221 10 123458999998764 455666666
Q ss_pred HHhCCeEEe----------cccCCC----------CCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 432 LKEKGHYVQ----------PINYPT----------VPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 432 l~~~GI~v~----------~~~~~~----------~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
+-..+..+ |..... ....++.+|+|++. |+.+.+++-|++++
T Consensus 324 -~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL 385 (386)
T PF01053_consen 324 -KLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL----EDPDDLIADLEQAL 385 (386)
T ss_dssp -SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S----S-HHHHHHHHHHHH
T ss_pred -hhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc----CCHHHHHHHHHHhc
Confidence 22111111 111000 01125799999994 45666666666654
No 324
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=1.6e-18 Score=178.51 Aligned_cols=215 Identities=20% Similarity=0.176 Sum_probs=153.8
Q ss_pred hHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHH
Q psy16848 60 LFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQV 139 (514)
Q Consensus 60 ~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 139 (514)
+...+++++++++.|.+.+++++||++|+.+++.++.+ +||+|+++...|.+....+.
T Consensus 63 p~~~~le~~lA~l~g~~~al~~~SG~~Ai~~al~all~--pGd~VIv~~~~y~~t~~~~~-------------------- 120 (427)
T PRK05994 63 PTNAVLEERVAALEGGTAALAVASGHAAQFLVFHTLLQ--PGDEFIAARKLYGGSINQFG-------------------- 120 (427)
T ss_pred ccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhC--CCCEEEEecCcchhHHHHHH--------------------
Confidence 55789999999999999999999999999999988866 99999999988876542211
Q ss_pred HHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCc
Q psy16848 140 LENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPE 219 (514)
Q Consensus 140 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~ 219 (514)
T Consensus 121 -------------------------------------------------------------------------------- 120 (427)
T PRK05994 121 -------------------------------------------------------------------------------- 120 (427)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecccc
Q psy16848 220 VAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHA 299 (514)
Q Consensus 220 v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~ 299 (514)
..+...|.++++++..|.+.+++.+ ++++++|++++++||+|.+.|+++|.++|+++|+++|+|++++
T Consensus 121 --------~~~~~~G~~v~~vd~~d~~~l~~ai----~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a 188 (427)
T PRK05994 121 --------HAFKSFGWQVRWADADDPASFERAI----TPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLA 188 (427)
T ss_pred --------HHHHhcCcEEEEECCCCHHHHHHhc----CcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcc
Confidence 1122345566666655655555554 3468999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHH-----------------------HHHHHH---
Q psy16848 300 VGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKN-----------------------FIDTIR--- 349 (514)
Q Consensus 300 ~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~-----------------------~~~~l~--- 349 (514)
.+... ..+..++|+++.|++|++|+.| |+++.... +.+.+.
T Consensus 189 ~~~~~---------~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (427)
T PRK05994 189 SPYLI---------RPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFA 259 (427)
T ss_pred ccccC---------CccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhh
Confidence 54321 1123489999999999998744 55553221 111100
Q ss_pred -----hhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC
Q psy16848 350 -----SYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI 402 (514)
Q Consensus 350 -----~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 402 (514)
........+..+++..++.+...|+.+ +.+.++..++..++.+.|++.
T Consensus 260 ~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL-----~~r~~~~~~~a~~la~~L~~~ 312 (427)
T PRK05994 260 FAIAARVLGLRDLGPAISPFNAFLILTGIETL-----PLRMQRHSDNALAVAEWLKGH 312 (427)
T ss_pred hHHHHHHHHHHhcCCCCCHHHHHHHHcCcccH-----HHHHHHHHHHHHHHHHHHHhC
Confidence 000001113356777777776666544 347777888888889999876
No 325
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.82 E-value=8.3e-18 Score=152.96 Aligned_cols=323 Identities=13% Similarity=0.121 Sum_probs=215.1
Q ss_pred HHHHHHHHhCCCCCCcCcc------cCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCcc
Q psy16848 37 CLGEALEKFGTGAGGTRNI------SGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGN 110 (514)
Q Consensus 37 a~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~ 110 (514)
+.++++-.||-+++-.-+. .-..+.+..+-+.+++++|++.+-++++.-++-.+++.++++ +||.|+++.+.
T Consensus 32 eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~--~gd~vV~D~~a 109 (382)
T COG1103 32 EARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCK--EGDWVVVDSLA 109 (382)
T ss_pred HHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhcc--CCCEEEEcCcc
Confidence 3444455566554432222 122445566667799999999998888888899999999987 99999999999
Q ss_pred chhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 111 HASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 111 h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
|.+..-|...+|.++..+++.+ .|..
T Consensus 110 HYttyvAAEragl~v~eVp~tg--------------~Pey---------------------------------------- 135 (382)
T COG1103 110 HYTTYVAAERAGLNVAEVPNTG--------------YPEY---------------------------------------- 135 (382)
T ss_pred hHHHHHHHHhcCCeEEecCCCC--------------CCce----------------------------------------
Confidence 9999999999999988776521 1110
Q ss_pred cccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCC
Q psy16848 191 YGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHS 270 (514)
Q Consensus 191 ~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~n 270 (514)
.+....+....+..++...+.+++.+++++..
T Consensus 136 ------------------------------------------------~i~~e~y~~viee~~~~~g~~~~lallTh~Dg 167 (382)
T COG1103 136 ------------------------------------------------KITPEGYAEVIEEVKDEGGDPPALALLTHVDG 167 (382)
T ss_pred ------------------------------------------------EecHHHHHHHHHHHHhccCCCceEEEEeccCC
Confidence 00011222222223333335588999999999
Q ss_pred CCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC--eEEEecHHHHHHH
Q psy16848 271 MTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG--GYIVGTKNFIDTI 348 (514)
Q Consensus 271 ptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G--G~l~~~~~~~~~l 348 (514)
..|.+.+.+.+.++|+++|++++..++|+.|.+ +..+...++|++++|.||++...| |++..+.+..+.+
T Consensus 168 ~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grm--------pvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V 239 (382)
T COG1103 168 EYGNLADAKKVAKICREYGVPLLLNCAYTVGRM--------PVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIV 239 (382)
T ss_pred CcCCchhhHHHHHHHHHcCCceEeecceeeccc--------cccccccCCCEEEecCccchhccCCeeEEeehhHHHHHH
Confidence 999999999999999999999999999998886 344445689999999999998767 9999999988876
Q ss_pred HhhcCc-e------EeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcccc--CC-CcEEEEE
Q psy16848 349 RSYAAG-F------IFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEH--TP-SHIIPIK 417 (514)
Q Consensus 349 ~~~~~~-~------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~-~~~~~i~ 417 (514)
-+.... + .++.+.-...+..+.+++-... +.+. ..+.--+..+++.+.|+++ |+...+ |. ..+..++
T Consensus 240 ~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~-eRVk-rWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fe 317 (382)
T COG1103 240 LRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVV-ERVK-RWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFE 317 (382)
T ss_pred HhhcccccccceeeeecccccCchHHHHHhcCHHHH-HHHH-HHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeec
Confidence 544311 1 1122222222333334433321 1111 1122235667888888888 465542 22 2244455
Q ss_pred eCCC--------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 418 IGNP--------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 418 l~~~--------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
.|.- ...--+++.| +++||.-. .+....++.+|+- ..+.|+++..++++++++++.
T Consensus 318 tp~f~eIakk~~r~gyFlY~EL-K~RgI~GI------~~G~Tk~~K~svy-Gl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 318 TPVFHEIAKKHKRKGYFLYEEL-KKRGIHGI------QPGQTKYFKLSVY-GLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred CchHHHHHHhCcCCceeeHHHH-HhcCcccc------ccCceeEEEEEee-cCCHHHHHHHHHHHHHHHHhc
Confidence 4421 1122456677 58887632 1233568888885 689999999999999998875
No 326
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.82 E-value=2.6e-18 Score=176.90 Aligned_cols=160 Identities=19% Similarity=0.201 Sum_probs=123.6
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+..++++++++++.|.+++++++||+.|+..++.++.+ +||+|+++.+.|.+....+
T Consensus 56 ~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~--~Gd~Vl~~~~~y~~t~~~~-------------------- 113 (418)
T TIGR01326 56 NPTTDVLEQRIAALEGGVAALAVASGQAAITYAILNLAQ--AGDNIVSSSYLYGGTYNLF-------------------- 113 (418)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhC--CCCEEEEECCCcHHHHHHH--------------------
Confidence 355789999999999999999999999999999988866 9999999988886654221
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 114 -------------------------------------------------------------------------------- 113 (418)
T TIGR01326 114 -------------------------------------------------------------------------------- 113 (418)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
...+...|+++++++.+|.+.+++.+ ++++++|++++++||+|.+.|+++|.++|+++|+++|+|++|
T Consensus 114 --------~~~~~~~G~~v~~v~~~d~~~l~~~l----~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~ 181 (418)
T TIGR01326 114 --------KHTLKRLGIEVRFVDPDDPEEFEKAI----DENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTF 181 (418)
T ss_pred --------HHHHHHcCcEEEEECCCCHHHHHHhc----CcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCC
Confidence 11223345566666655555555554 346889999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCCC---eEEEec
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYIVGT 341 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l~~~ 341 (514)
+.+... .....++|+++.|++|++++.| |+++.+
T Consensus 182 ~~~~~~---------~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~ 218 (418)
T TIGR01326 182 ATPYLC---------RPIDHGADIVVHSATKYIGGHGTAIGGVIVD 218 (418)
T ss_pred chhhcC---------CchhcCCeEEEECccccccCCccceEEEEEe
Confidence 854321 1113368999999999998866 555553
No 327
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.81 E-value=1.6e-17 Score=167.44 Aligned_cols=339 Identities=14% Similarity=0.121 Sum_probs=215.9
Q ss_pred hHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhh-hhcCCCCeeeccCCChHHHHH
Q psy16848 60 LFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQG-IRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 60 ~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~-~~~~~~~~~~~~~~d~~~l~~ 138 (514)
+-..+||+.+++++|.++++.++|||.|+.++.... ++|||.| +.++|.....+ +...|+.++....+
T Consensus 78 ~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~--v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d------- 146 (460)
T PRK13237 78 RNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIA--IKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIID------- 146 (460)
T ss_pred CcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhC--CCCcCEE--CCccchHhhHHHHHhCCcEEEeeecc-------
Confidence 446899999999999999999999999988754433 4599965 77777776655 66666643321100
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
+.+ ..-
T Consensus 147 ----------------~a~-----------------------------~~~----------------------------- 152 (460)
T PRK13237 147 ----------------EAH-----------------------------DAQ----------------------------- 152 (460)
T ss_pred ----------------ccc-----------------------------ccc-----------------------------
Confidence 000 000
Q ss_pred ceeeecchHHHHhhCCCCEEEec-CCChhHHHHHHhhccCCCceEEEEecCCCCC-ccccC---HHHHHHHHHHcCCEEE
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYR-HNDVNHLTQVLENMDVKIPKLVAFETVHSMT-GAICP---LKELCEVSHQHGALTF 293 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~l~~~~~~~~~~vv~~~~~npt-G~~~~---l~~l~~l~~~~gv~li 293 (514)
...+.. .-|.+.+++.+++...++++++.++.++|.. |...| +++|.++|++||+.||
T Consensus 153 -----------------~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi 215 (460)
T PRK13237 153 -----------------SDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVF 215 (460)
T ss_pred -----------------cCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEE
Confidence 000000 1266777777765444556667777777776 67764 7999999999999999
Q ss_pred Eeccccccc---c-----CCCCCCcccc-CCCccCceEEEcCCcccccC-CCeEEEe-cHHHHHHHHhhcCce-Eecc--
Q psy16848 294 VDEVHAVGL---Y-----GEHGAGIGER-DGQLHNMDIISGTLGKAFGN-IGGYIVG-TKNFIDTIRSYAAGF-IFTT-- 359 (514)
Q Consensus 294 ~Dea~~~g~---~-----g~~~~~~~~~-~~~~~~~di~~~S~sK~lg~-~GG~l~~-~~~~~~~l~~~~~~~-~~~~-- 359 (514)
+|.++.++. . +..+.++.+. .....-.|.+++|++|.++. .||+++. ++++.++++.....+ +|.+
T Consensus 216 ~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~eL~~~~r~~~~~~eG~~tyg 295 (460)
T PRK13237 216 FDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDEELFDEAKELVVVYEGMPSYG 295 (460)
T ss_pred EECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCHHHHHHHHHhccccCCCcCCC
Confidence 999999772 1 1111111100 00012479999999999865 4777765 578888887653222 1111
Q ss_pred CCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCCC-cEEEEEe-------C-CCccHHHHHHH
Q psy16848 360 SLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTPS-HIIPIKI-------G-NPALNTKICDM 430 (514)
Q Consensus 360 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~i~l-------~-~~~~~~~~~~~ 430 (514)
.++.-.+.++...|....+. ...+...+..++|.+.|.+.|++++.|.+ +-+.+.. + .....+.++..
T Consensus 296 g~~grd~~alAvgl~E~~~~---~y~~~ri~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ 372 (460)
T PRK13237 296 GMAGRDMEAMAIGIEESVQY---EYIEHRVGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAE 372 (460)
T ss_pred ChhhhHHHHHHhHHHhhchH---HHHHHHHHHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHH
Confidence 33344555555455543222 35555566778999999999999986654 4333321 2 12346788888
Q ss_pred HHHhCCeEEecc-cC-----CCCCC----CCcEEEEEeCC-CCCHHHHHHHHHHHHHHHHHcCCccCCcchhhHhHHHHH
Q psy16848 431 LLKEKGHYVQPI-NY-----PTVPV----GEEKIRLAPTP-FHTREMIDKFVTDLLAVWKSLDLPLSGLTCAQVNILLFI 499 (514)
Q Consensus 431 Ll~~~GI~v~~~-~~-----~~~~~----~~~~iRl~~~~-~~t~e~id~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 499 (514)
|+.+.||...-. +. +.... .-..+|++++. ..|.+.+|..++++..+.++........--.++|++++|
T Consensus 373 ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~~~g~~~~~ep~~lr~f 452 (460)
T PRK13237 373 LYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHREDIRGLRFVYEPKQLRFF 452 (460)
T ss_pred HHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhHhhcCCeEEeecCchhhhh
Confidence 888889887521 11 11111 12689998874 568899999999999999876554433455788889877
Q ss_pred HHHH
Q psy16848 500 ILFH 503 (514)
Q Consensus 500 ~~~~ 503 (514)
.+..
T Consensus 453 ~~~~ 456 (460)
T PRK13237 453 TARF 456 (460)
T ss_pred hccc
Confidence 6643
No 328
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.81 E-value=2.5e-17 Score=165.67 Aligned_cols=339 Identities=15% Similarity=0.130 Sum_probs=218.2
Q ss_pred hHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhh-hhcCCCCeeeccCCChHHHHH
Q psy16848 60 LFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQG-IRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 60 ~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~-~~~~~~~~~~~~~~d~~~l~~ 138 (514)
+-..+|++.+++++|.++++.++|||.|...+.... ++|||.| +.++|.....+ +...|+.++....+...+.
T Consensus 71 ~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~--l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~-- 144 (450)
T TIGR02618 71 RNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIA--IKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDA-- 144 (450)
T ss_pred CcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhC--CCCcCEE--CCceeHHHHHHHHHhCCeEEEeeeccccccc--
Confidence 456899999999999999999999999955544334 4599977 66778666655 6777764443211000000
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
. ...+ ..|
T Consensus 145 ----------~----------------------------------------~~~p-~~G--------------------- 152 (450)
T TIGR02618 145 ----------Q----------------------------------------LNIP-FKG--------------------- 152 (450)
T ss_pred ----------c----------------------------------------cCCC-CCC---------------------
Confidence 0 0000 000
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCC-ccccC---HHHHHHHHHHcCCEEEE
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT-GAICP---LKELCEVSHQHGALTFV 294 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~npt-G~~~~---l~~l~~l~~~~gv~li~ 294 (514)
.-|.+.+++.+.+...++++++.+++++|.. |.++| ++++.++|++||+.||+
T Consensus 153 -----------------------niD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~ 209 (450)
T TIGR02618 153 -----------------------NVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFY 209 (450)
T ss_pred -----------------------CcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEE
Confidence 1267888888876444456778787777754 78866 79999999999999999
Q ss_pred eccccccc--c------CCCCCCcccc-CCCccCceEEEcCCcccccC-CCeEEE-ecHHHHHHHHhhcCce-Ee-cc-C
Q psy16848 295 DEVHAVGL--Y------GEHGAGIGER-DGQLHNMDIISGTLGKAFGN-IGGYIV-GTKNFIDTIRSYAAGF-IF-TT-S 360 (514)
Q Consensus 295 Dea~~~g~--~------g~~~~~~~~~-~~~~~~~di~~~S~sK~lg~-~GG~l~-~~~~~~~~l~~~~~~~-~~-~~-~ 360 (514)
|.++.++. + |..+.++.+. .......|.+++|.+|..+. .||+++ .++++.++++.....+ ++ +. .
T Consensus 210 DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGg 289 (450)
T TIGR02618 210 DATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGG 289 (450)
T ss_pred EccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCc
Confidence 99999742 1 1112112100 00122578999999998865 488887 6788988887664332 11 11 2
Q ss_pred CcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccC-CCcEEEEEeC--------CCccHHHHHHHH
Q psy16848 361 LPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHT-PSHIIPIKIG--------NPALNTKICDML 431 (514)
Q Consensus 361 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~i~l~--------~~~~~~~~~~~L 431 (514)
++...+.++..+|+...+. ...++.....++|.+.|.+.|++++.+ .++.+.+... .....+.++..|
T Consensus 290 la~r~~~ala~gL~e~~~~---~y~~~r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~l 366 (450)
T TIGR02618 290 LAGRDMEAMAIGIREAVDY---EYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASI 366 (450)
T ss_pred hhhhhHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHH
Confidence 3444445555555543222 244455567889999999999998644 5566655432 123467888888
Q ss_pred HHhCCeEEecc-cC-----CCCCC----CCcEEEEEeCC-CCCHHHHHHHHHHHHHHHHHcCCccCCcchhhHhHHHHHH
Q psy16848 432 LKEKGHYVQPI-NY-----PTVPV----GEEKIRLAPTP-FHTREMIDKFVTDLLAVWKSLDLPLSGLTCAQVNILLFII 500 (514)
Q Consensus 432 l~~~GI~v~~~-~~-----~~~~~----~~~~iRl~~~~-~~t~e~id~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 500 (514)
+.+.||...-. +. +.... .-..+|++++. ..|.+.+|..++++..+.++.........-.++|++++|.
T Consensus 367 y~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~~~g~~~~~ep~~lr~f~ 446 (450)
T TIGR02618 367 YVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRDDIRGLKMVYEPKQLRFFT 446 (450)
T ss_pred HHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhHhhcCceEEeecchhhhhhh
Confidence 88889876531 11 11111 12689998874 5688999999999999998765544334557888898776
Q ss_pred HH
Q psy16848 501 LF 502 (514)
Q Consensus 501 ~~ 502 (514)
+.
T Consensus 447 ~~ 448 (450)
T TIGR02618 447 AR 448 (450)
T ss_pred hc
Confidence 53
No 329
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.81 E-value=1.3e-17 Score=165.91 Aligned_cols=288 Identities=17% Similarity=0.153 Sum_probs=199.0
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+....++++++++-|.+.++.++||..|+..++.++.+ +||+|++....|.....-+
T Consensus 62 nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll~--~GD~vl~~~~~YG~t~~~~-------------------- 119 (396)
T COG0626 62 NPTRDALEEALAELEGGEDAFAFSSGMAAISTALLALLK--AGDHVLLPDDLYGGTYRLF-------------------- 119 (396)
T ss_pred CccHHHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHhcC--CCCEEEecCCccchHHHHH--------------------
Confidence 466789999999999999999999999999998888876 9999999888776655211
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 120 -------------------------------------------------------------------------------- 119 (396)
T COG0626 120 -------------------------------------------------------------------------------- 119 (396)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
...+...|.++.+++..+.+..++.+.+ ++|++|++|+|.||+-.+.|+++|.++|+++|+++|+|+.+
T Consensus 120 --------~~~l~~~gi~~~~~d~~~~~~~~~~~~~---~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTf 188 (396)
T COG0626 120 --------EKILQKFGVEVTFVDPGDDEALEAAIKE---PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTF 188 (396)
T ss_pred --------HHHHHhcCeEEEEECCCChHHHHHHhcc---cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCc
Confidence 1222334566666666666555555543 57999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecH-HHHHHHHhhcC-ceEeccCCcHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTK-NFIDTIRSYAA-GFIFTTSLPPTVLAGAREA 372 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~-~~~~~l~~~~~-~~~~~~~~~~~~~~a~~~~ 372 (514)
+-+.+ ...+..++||++.|.+|.+++.+ |+++++. ++.+.+..... .. +..+++..+..+...
T Consensus 189 atP~~---------q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~--G~~l~p~dA~l~lRG 257 (396)
T COG0626 189 ATPVL---------QRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANT--GAVLSPFDAWLLLRG 257 (396)
T ss_pred ccccc---------cChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhc--CCCCCHHHHHHHHhc
Confidence 84432 22234589999999999999844 8777554 55555432222 22 446777777766666
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCc-c-cc----------------CCCcEEEEEeCCCccHHHHHHHHHH
Q psy16848 373 IRILSSQEGVELRAKHQDIVAYLRNELIQI-GFP-V-EH----------------TPSHIIPIKIGNPALNTKICDMLLK 433 (514)
Q Consensus 373 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~----------------~~~~~~~i~l~~~~~~~~~~~~Ll~ 433 (514)
++-+ .-+.++..+++..+.+.|++. .+. + .+ ..|+++.|.+.+.....+|.+.| +
T Consensus 258 lkTL-----~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L-~ 331 (396)
T COG0626 258 LRTL-----ALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSL-K 331 (396)
T ss_pred cchH-----HHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhC-C
Confidence 6544 246777788888888888886 221 1 11 14568999988753355566665 2
Q ss_pred hCCeEEeccc------CCCCC--------------CCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 434 EKGHYVQPIN------YPTVP--------------VGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 434 ~~GI~v~~~~------~~~~~--------------~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
-..+..+-|. .|..+ ..++.+|++++. |+++.+++-|++.++.
T Consensus 332 l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al~~ 394 (396)
T COG0626 332 LFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL----EDVEDLIADLEQALAK 394 (396)
T ss_pred ccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHHh
Confidence 3333332111 11000 136899999995 4455555555555543
No 330
>PRK15029 arginine decarboxylase; Provisional
Probab=99.80 E-value=1.1e-17 Score=179.50 Aligned_cols=309 Identities=13% Similarity=0.081 Sum_probs=202.0
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccc-cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVA-NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLT 137 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a-~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~ 137 (514)
.....+.++.+|+.+|.++.+|.++||++ |.+++.+++. +||.|+++++.|.|++.++.++|+.++++.+.-
T Consensus 204 ~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~--~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~----- 276 (755)
T PRK15029 204 TGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMT--DNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSR----- 276 (755)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcC--CCCEEEeecccHHHHHHHHHHcCCeEEEecccc-----
Confidence 45678999999999999999999998875 8888888876 999999999999999999999999999875420
Q ss_pred HHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccC
Q psy16848 138 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVN 217 (514)
Q Consensus 138 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~ 217 (514)
+ .+|. .+.
T Consensus 277 ----------~--------------------------~~Gi------------~~~------------------------ 284 (755)
T PRK15029 277 ----------N--------------------------RYGI------------IGP------------------------ 284 (755)
T ss_pred ----------c--------------------------ccCC------------ccC------------------------
Confidence 0 0000 000
Q ss_pred CceeeecchHHHHhhCCCCEEEec--CCChhHHHHHHhhcc------CCCceEEEEecCCCCCccccCHHHHHHHHHHcC
Q psy16848 218 PEVAIHASMIQGIRNSSAPKIIYR--HNDVNHLTQVLENMD------VKIPKLVAFETVHSMTGAICPLKELCEVSHQHG 289 (514)
Q Consensus 218 ~~v~~~~~~~~~~~~~g~~~~~v~--~~d~~~l~~~l~~~~------~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~g 289 (514)
++ .-+.+.+++.+++.. .++++++++++| +..|.+.++++|.++|++++
T Consensus 285 ----------------------i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h~~~ 341 (755)
T PRK15029 285 ----------------------IYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTS 341 (755)
T ss_pred ----------------------CCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHHhcC
Confidence 00 002345555554432 134558888888 46699999999999999999
Q ss_pred CEEEEecccc-ccccCCCCCCccccCCC-----c-cCce-EEEcCCcccccC--CCeEEEecHH--HH--HHHHhhcCce
Q psy16848 290 ALTFVDEVHA-VGLYGEHGAGIGERDGQ-----L-HNMD-IISGTLGKAFGN--IGGYIVGTKN--FI--DTIRSYAAGF 355 (514)
Q Consensus 290 v~li~Dea~~-~g~~g~~~~~~~~~~~~-----~-~~~d-i~~~S~sK~lg~--~GG~l~~~~~--~~--~~l~~~~~~~ 355 (514)
++|++||||+ ...+.+.. .....+ . .++| +++-|.||.+++ .++++....+ .+ +++.....-+
T Consensus 342 ~~llvDEAhGah~~F~~~~---p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~~~ 418 (755)
T PRK15029 342 DRLHFDEAWYGYARFNPIY---ADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMH 418 (755)
T ss_pred CeEEEECccccccccCccc---cccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHHHH
Confidence 9999999998 22222211 111111 1 4688 999999999976 3366654322 12 2332221111
Q ss_pred EeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-C-------------------------------
Q psy16848 356 IFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-G------------------------------- 403 (514)
Q Consensus 356 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------------------------------- 403 (514)
.+++++.+.++.+-.+...+......+..++..+....+++.+.++ +
T Consensus 419 -qSTSPSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 497 (755)
T PRK15029 419 -ATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFAD 497 (755)
T ss_pred -cCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccc
Confidence 1456677777777777666643345666777777777777777654 2
Q ss_pred -----------CccccC--C--------------Cc-EEEEEeCC-Ccc---------HHHHHHHHHHhCCeEEecccCC
Q psy16848 404 -----------FPVEHT--P--------------SH-IIPIKIGN-PAL---------NTKICDMLLKEKGHYVQPINYP 445 (514)
Q Consensus 404 -----------~~~~~~--~--------------~~-~~~i~l~~-~~~---------~~~~~~~Ll~~~GI~v~~~~~~ 445 (514)
+.+..+ . .+ -+.+..+. +.+ +..+.+.| +++||.+--
T Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L-~~~gI~~E~---- 572 (755)
T PRK15029 498 APTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWL-GRHGIVPTR---- 572 (755)
T ss_pred cchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHH-HHcCCEEEe----
Confidence 111110 0 00 11222221 112 22677777 699999863
Q ss_pred CCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 446 TVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 446 ~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
.+...+-+-++...|++++++++++|.++.+..
T Consensus 573 ---~~~~~vL~l~s~g~t~~~~~~L~~aL~~~~~~~ 605 (755)
T PRK15029 573 ---TTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_pred ---cCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhh
Confidence 234466677777899999999999999886644
No 331
>PRK04311 selenocysteine synthase; Provisional
Probab=99.80 E-value=5.4e-17 Score=167.28 Aligned_cols=325 Identities=15% Similarity=0.110 Sum_probs=203.3
Q ss_pred ChhHHHHHHHHHHHhCCCCCCcCcc-cCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCc
Q psy16848 31 PKGGRKCLGEALEKFGTGAGGTRNI-SGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAG 109 (514)
Q Consensus 31 ~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~ 109 (514)
++++.+++.+.+..|.... ..+. ....+..+.+++.+++++|.+++++++||+.|+..++.++ . +||+|++++.
T Consensus 99 ~~~v~eav~~~~~~~~~le--~~l~~g~~g~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~l-~--~GdeVIvs~~ 173 (464)
T PRK04311 99 SEAAIEAVTEAARGYSNLE--YDLATGKRGSRDRALAALLCALTGAEDALVVNNNAAAVLLALNAL-A--AGKEVIVSRG 173 (464)
T ss_pred CHHHHHHHHHHHhcccccc--cchhhcccchHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHh-C--CCCEEEEcch
Confidence 5788888888887654211 1111 1123557899999999999999999999999988888654 3 9999999887
Q ss_pred cchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccc
Q psy16848 110 NHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVG 189 (514)
Q Consensus 110 ~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (514)
+|.++-...
T Consensus 174 e~~~~ggs~----------------------------------------------------------------------- 182 (464)
T PRK04311 174 ELVEIGGAF----------------------------------------------------------------------- 182 (464)
T ss_pred hhhhcCcch-----------------------------------------------------------------------
Confidence 664321000
Q ss_pred ccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCC
Q psy16848 190 LYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVH 269 (514)
Q Consensus 190 ~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~ 269 (514)
.....+...|+++++++..+... .+.+++..+++|+++++++++
T Consensus 183 -----------------------------------~i~~~~~~~G~~l~~v~~~~~t~-~~dle~aI~~~TklV~~vh~s 226 (464)
T PRK04311 183 -----------------------------------RIPDVMRQAGARLVEVGTTNRTH-LRDYEQAINENTALLLKVHTS 226 (464)
T ss_pred -----------------------------------hhHHHHHHCCcEEEEECCCCCCC-HHHHHHhcCccCeEEEEEcCC
Confidence 00112234566677776432211 233444446679999999999
Q ss_pred CC--Cc--cccCHHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccc-c-CCCccCceEEEcCCcccccCC-CeEEEec
Q psy16848 270 SM--TG--AICPLKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGE-R-DGQLHNMDIISGTLGKAFGNI-GGYIVGT 341 (514)
Q Consensus 270 np--tG--~~~~l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~-~-~~~~~~~di~~~S~sK~lg~~-GG~l~~~ 341 (514)
|+ +| ...|+++|.++|++||+++++|.+.+ ++-.+..+.+..+ . .....++|++++|.+|++|++ +|+++++
T Consensus 227 N~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~ 306 (464)
T PRK04311 227 NYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGK 306 (464)
T ss_pred CccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEc
Confidence 98 34 56789999999999999999999643 2111111100000 1 112358999999999999754 4999999
Q ss_pred HHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhch-----------HHHHHHHHHHHHHHHHHHHHhC---CC--c
Q psy16848 342 KNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQE-----------GVELRAKHQDIVAYLRNELIQI---GF--P 405 (514)
Q Consensus 342 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~-----------~~~~~~~~~~~~~~l~~~L~~~---g~--~ 405 (514)
+++++.++.....- ........+++..+++..+.... +....++..++++.+.+.|+.. ++ .
T Consensus 307 ~~li~~l~~~~~~r--~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~ 384 (464)
T PRK04311 307 KELIARLKKHPLKR--ALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVE 384 (464)
T ss_pred HHHHHHHhhchhHH--HHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEE
Confidence 99998776422111 22344555556666665332111 1222366677888888888765 12 2
Q ss_pred cccC-----CC-------cEEEEEeC-CCccHHHHHHHHHHhCC--eEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHH
Q psy16848 406 VEHT-----PS-------HIIPIKIG-NPALNTKICDMLLKEKG--HYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKF 470 (514)
Q Consensus 406 ~~~~-----~~-------~~~~i~l~-~~~~~~~~~~~Ll~~~G--I~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~ 470 (514)
+... .| +-+.+.+. ...+..++.+.|. +.. |+.+ ..++.+.+-+. ...++|.+.+
T Consensus 385 ~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr-~~~~~i~~r--------~~~~~~~ld~r-~~~~~~~~~~ 454 (464)
T PRK04311 385 VVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLR-LLPPPVIGR--------IEDGRLLLDLR-TLEEEDEERL 454 (464)
T ss_pred EEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHh-cCCCCEEEE--------EECCEEEEEeC-cCCHHHHHHH
Confidence 2211 00 12334443 2346788888884 544 4443 12456777775 5678999999
Q ss_pred HHHHHHHHH
Q psy16848 471 VTDLLAVWK 479 (514)
Q Consensus 471 ~~~l~~~l~ 479 (514)
++++++++.
T Consensus 455 ~~~~~~~~~ 463 (464)
T PRK04311 455 AAALLEALN 463 (464)
T ss_pred HHHHHHHhh
Confidence 999998754
No 332
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.80 E-value=6e-18 Score=171.01 Aligned_cols=208 Identities=16% Similarity=0.116 Sum_probs=155.5
Q ss_pred CCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-
Q psy16848 257 VKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG- 335 (514)
Q Consensus 257 ~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G- 335 (514)
.+++++|.+++..|.+|...|+++| ++++|+++++|.++++|.. +.+- + ..|++++|.+|++|++|
T Consensus 126 ~~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~--------~idv-~-~~D~~~~s~~K~lg~~~G 192 (361)
T TIGR01366 126 DPGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGL--------PVDI-A-ETDVYYFAPQKNFASDGG 192 (361)
T ss_pred CCCCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCC--------CCCH-H-HCCEEEEEchhhcCCCCc
Confidence 4579999999999999999999887 5889999999999998764 2221 2 37999999999998865
Q ss_pred -eEEEecHHHHHHHHhhcCc------eE------------e-ccCCcHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHH
Q psy16848 336 -GYIVGTKNFIDTIRSYAAG------FI------------F-TTSLPPTVLAGAREAIRILSSQ-EGVELRAKHQDIVAY 394 (514)
Q Consensus 336 -G~l~~~~~~~~~l~~~~~~------~~------------~-~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~ 394 (514)
++++.++++++.+.....+ +. . ..+.+.....++.++++++.+. +++.+.++.+++.++
T Consensus 193 l~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~ 272 (361)
T TIGR01366 193 LWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSR 272 (361)
T ss_pred eEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 5556688888776632111 00 0 1133445556888899988777 588888999999999
Q ss_pred HHHHHHhCC-Ccccc-C---CCcE-EEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHH
Q psy16848 395 LRNELIQIG-FPVEH-T---PSHI-IPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMID 468 (514)
Q Consensus 395 l~~~L~~~g-~~~~~-~---~~~~-~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id 468 (514)
+.+.+.+.+ +.... . .... ..+.++++.+..++.+.| +++||.+.++... .+.+.+|+++..++|.+|++
T Consensus 273 l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~~~L-~~~gI~i~~~~~~---l~~~~vRis~~~~~t~~di~ 348 (361)
T TIGR01366 273 LYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDIDAATVAKIL-RANGIVDTEPYRK---LGRNQLRVAMFPAIDPDDVE 348 (361)
T ss_pred HHHHHHhCCCcccCCCChhhcccceEEEECCCccCHHHHHHHH-HHCCCeeccCccc---cCCCcEEEEcCCCCCHHHHH
Confidence 999999985 44332 1 1222 234455656778888889 5889999765421 23568999999999999999
Q ss_pred HHHHHHHHHHHHc
Q psy16848 469 KFVTDLLAVWKSL 481 (514)
Q Consensus 469 ~~~~~l~~~l~~~ 481 (514)
+++++|+++++++
T Consensus 349 ~l~~al~~~~~~~ 361 (361)
T TIGR01366 349 ALTECVDWVVERL 361 (361)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999988763
No 333
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.80 E-value=9.4e-18 Score=171.08 Aligned_cols=304 Identities=17% Similarity=0.124 Sum_probs=196.3
Q ss_pred chHHHHHHHHHHhHcCCC---cEEEEeccc-cccccchhhccccC-CCceEEecCccchhhhhhhhcCCCCeeeccCC-C
Q psy16848 59 SLFHEKLEEDVAKLHQKE---AGLVFTSCY-VANDSTLFTLGKMI-PGLHYISDAGNHASMIQGIRNSSAPKIIYRHN-D 132 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~---~~i~~~sGt-~a~~~~l~~l~~~~-~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~-d 132 (514)
..+..++++.+++++|.+ +++++++|| .++.+++.++.... +||.|+++..+|.++..++...|++++.++.. +
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d 183 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLD 183 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeec
Confidence 466788999999999987 688899999 67777776665222 58999999999999999999999988766520 0
Q ss_pred hHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHH
Q psy16848 133 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIIS 212 (514)
Q Consensus 133 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~ 212 (514)
.+. |
T Consensus 184 ~~~---------------------~------------------------------------------------------- 187 (444)
T TIGR03531 184 GDE---------------------L------------------------------------------------------- 187 (444)
T ss_pred CcC---------------------C-------------------------------------------------------
Confidence 000 0
Q ss_pred hhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecC-CCCCccccCHHHHHHHHHHcCCE
Q psy16848 213 GTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETV-HSMTGAICPLKELCEVSHQHGAL 291 (514)
Q Consensus 213 ~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~-~nptG~~~~l~~l~~l~~~~gv~ 291 (514)
.-|.+.+++.+.+. ++++.++++.++ .++.|...++++|.++|++||++
T Consensus 188 -----------------------------~iD~e~Le~aIt~~-~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~ 237 (444)
T TIGR03531 188 -----------------------------TTDVEDIERAIEEI-GPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIP 237 (444)
T ss_pred -----------------------------CcCHHHHHHHHHhc-cCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCE
Confidence 01455555555532 113455555444 35556788899999999999999
Q ss_pred EEEeccccccccCCCCCCccccCCCcc-CceEEEcCCcccccCCC--eEEEe-cHHHHHHHHhhcCceEeccCCcHHHHH
Q psy16848 292 TFVDEVHAVGLYGEHGAGIGERDGQLH-NMDIISGTLGKAFGNIG--GYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLA 367 (514)
Q Consensus 292 li~Dea~~~g~~g~~~~~~~~~~~~~~-~~di~~~S~sK~lg~~G--G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~ 367 (514)
+|+|++|+.+..... .... .+... .+|++++|+||++..+| |+++. ++++++.+.....+. ..+...+.
T Consensus 238 lIvDaAyg~~~~~~~--~~~~-~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~g~----~~~s~~~~ 310 (444)
T TIGR03531 238 HIVNNAYGLQSNKYM--ELIN-KAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPGR----ASASPSLD 310 (444)
T ss_pred EEEECcCcCcChhhh--hhhh-ccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhccCC----CCChHHHH
Confidence 999999995432100 0000 11112 36999999999997533 65655 678888777543221 12233444
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC----CCccccCC-CcE-EEEEeC--CCccHHHHHHHHHHhCCeEE
Q psy16848 368 GAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI----GFPVEHTP-SHI-IPIKIG--NPALNTKICDMLLKEKGHYV 439 (514)
Q Consensus 368 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~-~~~-~~i~l~--~~~~~~~~~~~Ll~~~GI~v 439 (514)
+....+. +..++++++.++..++++++.+.|+++ |-.+...+ .++ +.+.+. .+.+...+...|+ .++|.-
T Consensus 311 ~~~~ll~-~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~-~~~v~g 388 (444)
T TIGR03531 311 VLITLLS-LGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLY-SRRVTG 388 (444)
T ss_pred HHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHH-hCCCCC
Confidence 4444443 335677888999999999999988775 55555443 332 223333 1245678888886 676632
Q ss_pred ----eccc-------CC---CCC---CCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 440 ----QPIN-------YP---TVP---VGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 440 ----~~~~-------~~---~~~---~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
.++. .+ ... .-..++-++....++++|+|.++++|+++
T Consensus 389 ~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 389 PRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred ceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 1222 00 000 00135556666789999999999999875
No 334
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.80 E-value=7.9e-18 Score=170.08 Aligned_cols=240 Identities=15% Similarity=0.072 Sum_probs=165.4
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+..+++|++++++.|.++++.++||+.|+.+++.++.+ +||+|+++...|.......
T Consensus 63 ~P~~~~lE~~la~leg~~~av~~sSG~aAi~~al~all~--~GD~Vl~~~~~yg~t~~~~-------------------- 120 (384)
T PRK06434 63 NPTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSLIK--KGKRILSISDLYGQTFYFF-------------------- 120 (384)
T ss_pred ChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhC--CCCEEEEecCccchHHHHH--------------------
Confidence 577899999999999999999999999999999988866 9999999877665544211
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 121 -------------------------------------------------------------------------------- 120 (384)
T PRK06434 121 -------------------------------------------------------------------------------- 120 (384)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
...+...|+++++++.++.+.+. + ..+++++|+++++.||++.+.|+++|.++|++++ +++|.++
T Consensus 121 --------~~~~~~~Gi~v~fvd~~~~~~~~--l---~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~ 185 (384)
T PRK06434 121 --------NKVLKTLGIHVDYIDTDRLNSLD--F---DPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATF 185 (384)
T ss_pred --------HHHHHhcCcEEEEECCCChhhee--e---cCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCC
Confidence 11223345556666543322211 1 1236899999999999999999999999999998 4669998
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCC----CeEEEe-cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI----GGYIVG-TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~----GG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
+.+..++ .+..+.|++++|.+|.+++. ||+++. ++++.+.++.....+ +...++..++.+...|
T Consensus 186 ~s~~~~~---------pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~--G~~~~~~~A~l~~~gL 254 (384)
T PRK06434 186 ASPYNQN---------PLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTL--GSNPDPIQAYLALRGL 254 (384)
T ss_pred CCcccCC---------chhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhc--CCCCCHHHHHHHHhCC
Confidence 6333211 11347899999999999752 477766 556666665443233 3456776666655555
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcc------------ccCCCcEEEEEeCCCccHHHHHHHH
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI-GFPV------------EHTPSHIIPIKIGNPALNTKICDML 431 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~------------~~~~~~~~~i~l~~~~~~~~~~~~L 431 (514)
+. ++.+.++..++...+.+.|++. .+.- ....++++.|.+.+......|.+.|
T Consensus 255 ~t-----L~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l 320 (384)
T PRK06434 255 KT-----LGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNL 320 (384)
T ss_pred Cc-----HHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECCHHHHHHHHHhC
Confidence 43 3457888888899999999876 2221 1124668999986433344455544
No 335
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.79 E-value=1.6e-17 Score=158.23 Aligned_cols=307 Identities=18% Similarity=0.192 Sum_probs=199.6
Q ss_pred HHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhh
Q psy16848 40 EALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIR 119 (514)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~ 119 (514)
++...|+....+.-+..-..+....+|++++.+-|--.++.+.||..|+..++..+++ +||+|+.+..-|.....-
T Consensus 42 haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~la~--aGD~iVss~~LYGGT~~l-- 117 (426)
T COG2873 42 HAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEGGVAALAVASGQAAITYAILNLAG--AGDNIVSSSKLYGGTYNL-- 117 (426)
T ss_pred HHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhcchhhhhhccchHHHHHHHHHhcc--CCCeeEeeccccCchHHH--
Confidence 4444555544443333333466789999999998877789999999999999999987 999999877766554421
Q ss_pred cCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCcee
Q psy16848 120 NSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIG 199 (514)
Q Consensus 120 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 199 (514)
T Consensus 118 -------------------------------------------------------------------------------- 117 (426)
T COG2873 118 -------------------------------------------------------------------------------- 117 (426)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHH
Q psy16848 200 ERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK 279 (514)
Q Consensus 200 ~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~ 279 (514)
+...+...|.++.+++..|.+.+++.++ ++||+|++|+..||.+.+.|++
T Consensus 118 --------------------------f~~tl~~~Gi~v~fvd~~d~~~~~~aI~----~nTkavf~EtigNP~~~v~Die 167 (426)
T COG2873 118 --------------------------FSHTLKRLGIEVRFVDPDDPENFEAAID----ENTKAVFAETIGNPGLDVLDIE 167 (426)
T ss_pred --------------------------HHHHHHhcCcEEEEeCCCCHHHHHHHhC----cccceEEEEeccCCCccccCHH
Confidence 1233456677888888777777766665 5699999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEecHHHHHHH-----Hh
Q psy16848 280 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGTKNFIDTI-----RS 350 (514)
Q Consensus 280 ~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~~~~~~~l-----~~ 350 (514)
+|.++|+++|+++|+|...+-.++ ...++.++|||+.|.+|++|+.| |+++-... .+.- ..
T Consensus 168 ~ia~iAh~~gvpliVDNT~atpyl---------~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~-FDw~~~~rfP~ 237 (426)
T COG2873 168 AIAEIAHRHGVPLIVDNTFATPYL---------CRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGK-FDWTANGRFPE 237 (426)
T ss_pred HHHHHHHHcCCcEEEecCCCccee---------cchhhcCCCEEEEeecccccCCccccceEEEeCCc-cccccCCCCcc
Confidence 999999999999999999985443 12235689999999999999866 65543221 1111 00
Q ss_pred hc------CceE---------------------eccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-
Q psy16848 351 YA------AGFI---------------------FTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI- 402 (514)
Q Consensus 351 ~~------~~~~---------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 402 (514)
+. .+.. ++..++|.........++- +.-++++..++...+.+.|+..
T Consensus 238 ~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlET-----L~LRmerH~~NA~~vA~~L~~Hp 312 (426)
T COG2873 238 FTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLET-----LSLRMERHCENALKVAEFLENHP 312 (426)
T ss_pred cCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhh-----hHHHHHHHHHhHHHHHHHHhcCC
Confidence 00 0000 1223444444444444432 2346777788888899999876
Q ss_pred CCccc-------------------cCCCcEEEEEeCCC-ccHHHHHHHHH---------HhCCeEEecccCCCC------
Q psy16848 403 GFPVE-------------------HTPSHIIPIKIGNP-ALNTKICDMLL---------KEKGHYVQPINYPTV------ 447 (514)
Q Consensus 403 g~~~~-------------------~~~~~~~~i~l~~~-~~~~~~~~~Ll---------~~~GI~v~~~~~~~~------ 447 (514)
.+.++ ...+.++.|.+.++ .....+.+.|. +.+-+.+.|.+.-..
T Consensus 313 kV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee 392 (426)
T COG2873 313 KVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEE 392 (426)
T ss_pred CeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHH
Confidence 22211 01344888888765 22344544441 022244444442110
Q ss_pred ----CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 448 ----PVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 448 ----~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
...+..||+|++. |+++.++.-|++.++
T Consensus 393 ~~~aGv~~~~IRlSVGI----Ed~~DiiaDl~qAl~ 424 (426)
T COG2873 393 QAAAGVTPDLIRLSVGI----EDIDDIIADLEQALE 424 (426)
T ss_pred HHhcCCCCCcEEEEecc----CCHHHHHHHHHHHHh
Confidence 1136899999993 556666666666554
No 336
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.79 E-value=1.3e-18 Score=171.22 Aligned_cols=230 Identities=19% Similarity=0.210 Sum_probs=158.0
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEecc-ccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSC-YVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLT 137 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sG-t~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~ 137 (514)
....+++++++++++|.+++++.++| |+++..++.++.+ |||.|+++.+.|.++..+++..|++++.+.....+
T Consensus 58 ~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~--~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~--- 132 (294)
T cd00615 58 TGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCG--PGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNP--- 132 (294)
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCC--CCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCc---
Confidence 46689999999999999988875555 5678888888866 99999999999999999999888877654321000
Q ss_pred HHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccC
Q psy16848 138 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVN 217 (514)
Q Consensus 138 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~ 217 (514)
..|+
T Consensus 133 ---------------------------------------------------------~~~~------------------- 136 (294)
T cd00615 133 ---------------------------------------------------------YYGI------------------- 136 (294)
T ss_pred ---------------------------------------------------------ccCc-------------------
Confidence 0000
Q ss_pred CceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecc
Q psy16848 218 PEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEV 297 (514)
Q Consensus 218 ~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea 297 (514)
....+.+.+++.+++. +++++++++++ |++|.++|+++|.++|+++|+++|+|++
T Consensus 137 ----------------------~~~i~~~~l~~~l~~~--~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA 191 (294)
T cd00615 137 ----------------------AGGIPPETFKKALIEH--PDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEA 191 (294)
T ss_pred ----------------------CCCCCHHHHHHHHHhC--CCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECc
Confidence 0012556666666542 35788888887 7899999999999999999999999999
Q ss_pred ccccc-cCCCCCCccccCCCccCceEEEcCCcccccC-C-CeEEEecHHH--HHHHHhhcCceEeccCCcHHHHHHHHHH
Q psy16848 298 HAVGL-YGEHGAGIGERDGQLHNMDIISGTLGKAFGN-I-GGYIVGTKNF--IDTIRSYAAGFIFTTSLPPTVLAGAREA 372 (514)
Q Consensus 298 ~~~g~-~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~-~-GG~l~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~a~~~~ 372 (514)
|+... +... .+......++|+++.|+||++++ . ||++..+.+. .+.+......+ .+++.+...++++..+
T Consensus 192 ~~~~~~~~~~----~~~~~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~~~-~ttsps~~~~asl~~a 266 (294)
T cd00615 192 HGAHFRFHPI----LPSSAAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALNLH-QSTSPSYLILASLDVA 266 (294)
T ss_pred chhhhccCcc----cCcchhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHHHH-CCCCcHHHHHHHHHHH
Confidence 98322 1111 11111234789999999999965 2 3555454332 12222211111 1345666777777777
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy16848 373 IRILSSQEGVELRAKHQDIVAYLRNELI 400 (514)
Q Consensus 373 l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 400 (514)
++.+. ....+..++..++.+++++.+.
T Consensus 267 ~~~~~-~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 267 RAMMA-LEGKELVEELIELALYARQEIN 293 (294)
T ss_pred HHHHH-HHhHHHHHHHHHHHHHHHHHHh
Confidence 77663 3345667778888888888765
No 337
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.78 E-value=4.7e-17 Score=175.78 Aligned_cols=308 Identities=14% Similarity=0.143 Sum_probs=201.0
Q ss_pred ccCcchHHHHHHHHHHhHcCCCcEEEEe-ccccccccchhhccc------cCCCceEEecCccchhhhhhhhcCCCCeee
Q psy16848 55 ISGNSLFHEKLEEDVAKLHQKEAGLVFT-SCYVANDSTLFTLGK------MIPGLHYISDAGNHASMIQGIRNSSAPKII 127 (514)
Q Consensus 55 ~~~~~~~~~~~~~~la~~~~~~~~i~~~-sGt~a~~~~l~~l~~------~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~ 127 (514)
..|+.+...++++.+++++|.+.+-+.. ||+++..+++.++.. -...+.|+++...|.+....+...|.+++.
T Consensus 538 sQG~lq~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~ 617 (954)
T PRK12566 538 AEGYRAMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVI 617 (954)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEE
Confidence 4577888999999999999999886554 888888777766542 123578999999997766555555555554
Q ss_pred ccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhh
Q psy16848 128 YRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHN 207 (514)
Q Consensus 128 ~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~ 207 (514)
++.++ .|
T Consensus 618 Vp~D~---------------------------------------------------------------~G---------- 624 (954)
T PRK12566 618 VECDP---------------------------------------------------------------DG---------- 624 (954)
T ss_pred eccCC---------------------------------------------------------------CC----------
Confidence 43310 00
Q ss_pred HHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHH
Q psy16848 208 MDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQ 287 (514)
Q Consensus 208 i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~ 287 (514)
.-|.+.+++.+++. .+++++|+++++++-++...++++|.++|++
T Consensus 625 ----------------------------------~iDle~L~a~I~~~-~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~ 669 (954)
T PRK12566 625 ----------------------------------NVDLDDLKAKAAAA-GDRLSCLMITYPSTHGVYEEGIREICEVVHQ 669 (954)
T ss_pred ----------------------------------CcCHHHHHHHhhcc-CCCEEEEEEEecCcCceecchHHHHHHHHHH
Confidence 11556666666533 3568889999998887776779999999999
Q ss_pred cCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC-CC------eEEEecHHHHHHHHhhcC----c--
Q psy16848 288 HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN-IG------GYIVGTKNFIDTIRSYAA----G-- 354 (514)
Q Consensus 288 ~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~-~G------G~l~~~~~~~~~l~~~~~----~-- 354 (514)
+|+++++|.++..+..+ +.... ..++|++++++||+++. .| |.+.+.+++.+.+..... +
T Consensus 670 ~Galv~vDgA~~~a~~~-----l~~Pg--~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~ 742 (954)
T PRK12566 670 HGGQVYMDGANLNAQVG-----LARPA--DIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPD 742 (954)
T ss_pred cCCEEEEEeeChhhccC-----CCChh--hcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCC
Confidence 99999999999854431 11111 45899999999999863 12 555556655555543210 0
Q ss_pred --eEeccCCcHHHHHHHHHHHHHhhhch--HHHHHHHHHHHHHHHHHHHHhC-CCccccCCCcE---EEEEeC-----CC
Q psy16848 355 --FIFTTSLPPTVLAGAREAIRILSSQE--GVELRAKHQDIVAYLRNELIQI-GFPVEHTPSHI---IPIKIG-----NP 421 (514)
Q Consensus 355 --~~~~~~~~~~~~~a~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~---~~i~l~-----~~ 421 (514)
..-..+.+......+..++.++...+ +.+.......+.+|+.+.|.+. ++.+.+..+.+ +.+.+. .+
T Consensus 743 ~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~eLk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii~~~~l~~~~g 822 (954)
T PRK12566 743 PNNGAVSAAPWGSASILPISWMYIAMMGPQLADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECILDLRPLKAQTG 822 (954)
T ss_pred CCCCceeecccchHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEEccccccccC
Confidence 00011122222222333333332222 4444445577899999999774 44442222231 223332 12
Q ss_pred ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 422 ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 422 ~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
.+..++.++|+ +.||......++ ..+.+|++++...+++|+|+++++|+.+.++++
T Consensus 823 ~~~~dvakRL~-d~Gihapt~~fP----v~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 823 ISEEDVAKRLM-DYGFHAPTMSFP----VPGTLMVEPTESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred CCHHHHHHHHH-HCCcEEeEEeec----cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 45678999997 999987654332 266899999999999999999999999988854
No 338
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.77 E-value=6.8e-17 Score=161.41 Aligned_cols=338 Identities=21% Similarity=0.208 Sum_probs=197.0
Q ss_pred eeeecc-cCCCCCChhHHHHHHHHHH-HhCCCCCCcCcccCcchHHHH----HHHHHHhHcCCC----cE-EEEeccccc
Q psy16848 19 VTCRLS-SVQYKVPKGGRKCLGEALE-KFGTGAGGTRNISGNSLFHEK----LEEDVAKLHQKE----AG-LVFTSCYVA 87 (514)
Q Consensus 19 ~~~d~~-~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~la~~~~~~----~~-i~~~sGt~a 87 (514)
..+.+- |.+| ..|.+.+++...+. +|..++.+.+++.|. +..++ +.+++.++|+.+ ++ +-..||+.|
T Consensus 21 ~~l~LiaSEN~-~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~-~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~A 98 (399)
T PF00464_consen 21 STLNLIASENY-MSPAVREALGSDLTNKYAEGYPGKRYYGGC-EYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQA 98 (399)
T ss_dssp HSEE-CTT------HHHHHHHTSGGGGS-TTEETTEESSSST-HHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHH
T ss_pred cCccccCcccc-cCHHHHHHhCCcceeeccccCCCcccccCc-chhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHH
Confidence 345553 3333 34777776665554 455555555655554 33444 557788889988 65 446799999
Q ss_pred cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchh
Q psy16848 88 NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK 167 (514)
Q Consensus 88 ~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (514)
|++++.++.+ |||+|+.-+..|..-+.--.....+-+ . ...
T Consensus 99 n~av~~aLl~--pGD~Im~l~l~~GGHlshg~~~~~~~~-----~------~~~-------------------------- 139 (399)
T PF00464_consen 99 NLAVYMALLK--PGDTIMGLSLPHGGHLSHGSSVNFKKI-----S------ASG-------------------------- 139 (399)
T ss_dssp HHHHHHHHT---TT-EEEEEEGGGT--GGGT-TTSHSBS-----S------HHH--------------------------
T ss_pred HHHHHHHHHh--hcCcEEecChhhccccccccccccccc-----c------ccc--------------------------
Confidence 9999999987 999999877766544311000000000 0 000
Q ss_pred HHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec------
Q psy16848 168 ELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR------ 241 (514)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~------ 241 (514)
..-+.+.++
T Consensus 140 -----------------------------------------------------------------~~~~~~~y~~d~~~~ 154 (399)
T PF00464_consen 140 -----------------------------------------------------------------LYFESVPYPVDPDTG 154 (399)
T ss_dssp -----------------------------------------------------------------HHSEEEEEEB-TTTS
T ss_pred -----------------------------------------------------------------ceEEEEeeeeecCCC
Confidence 000112222
Q ss_pred CCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCce
Q psy16848 242 HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMD 321 (514)
Q Consensus 242 ~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~d 321 (514)
.-|++.+++.+++. ++++|++..-..| ..+|+++++++|++.|++|+.|.+|..|..... -+... ...+|
T Consensus 155 ~ID~d~l~~~a~~~---kPklIi~G~S~y~--~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g--~~~~P---~~~AD 224 (399)
T PF00464_consen 155 LIDYDELEKLAKEH---KPKLIICGASSYP--RPIDFKRFREIADEVGAYLMADISHIAGLIAGG--LFPNP---FPYAD 224 (399)
T ss_dssp SB-HHHHHHHHHHH-----SEEEEE-SSTS--S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTT--SS--G---CCTSS
T ss_pred eECHHHHHHHHhhc---CCCEEEECchhcc--CccCHHHHHHHHHhcCcEEEecccccccceehh--eecCc---cccce
Confidence 12677777777765 3678887665433 456799999999999999999999997765211 01111 22589
Q ss_pred EEEcCCcccc-cCCCeEEEec--------------HHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHH
Q psy16848 322 IISGTLGKAF-GNIGGYIVGT--------------KNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRA 386 (514)
Q Consensus 322 i~~~S~sK~l-g~~GG~l~~~--------------~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 386 (514)
++++|.||++ |+.||+++.+ +++.+.+.....+.. ..+......++...++.........+..+
T Consensus 225 vvt~sThKtl~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~-qg~~h~~~iaalAval~ea~~~~fk~Ya~ 303 (399)
T PF00464_consen 225 VVTGSTHKTLRGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGL-QGGPHMHRIAALAVALKEALSPEFKEYAK 303 (399)
T ss_dssp EEEEESSGGG-SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT--SS--HHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred EEEeeccccccccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCc-ccCcchhHHHHHHHHHhcccCHHHHHHHH
Confidence 9999999999 7778999888 788888876544431 11223334444445555544556678899
Q ss_pred HHHHHHHHHHHHHHhCCCcccc--CCCcEEEEEeCCC-ccHHHHHHHHHHhCCeEEecccCCCC--CCCCcEEEEEeC--
Q psy16848 387 KHQDIVAYLRNELIQIGFPVEH--TPSHIIPIKIGNP-ALNTKICDMLLKEKGHYVQPINYPTV--PVGEEKIRLAPT-- 459 (514)
Q Consensus 387 ~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~i~l~~~-~~~~~~~~~Ll~~~GI~v~~~~~~~~--~~~~~~iRl~~~-- 459 (514)
++.++++.|.+.|.+.|+.++. +..+++.+.+... .+..+..+.| ++.||.+..-..|.. +.....+|+...
T Consensus 304 qVv~NAk~La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~L-e~~gI~vnkn~iP~d~~~~~~sGlRlGT~~l 382 (399)
T PF00464_consen 304 QVVKNAKALAEALQERGFKVVTGGTDNHQVLVDLRSFGIDGKEAEKAL-EEAGIIVNKNTIPGDRSPFVPSGLRLGTPAL 382 (399)
T ss_dssp HHHHHHHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHH-HHTTEE-EEE--TTTSTTTT-SEEEEESHHH
T ss_pred HHHHHHHHHHHHHhhCCcEEEECCCCCCeEEEEecccccchHHHHHHH-HhcCeeecccccCCCCCCCCCCEEEECCHHH
Confidence 9999999999999999999874 4667888887542 3455666666 799999975444332 123578999875
Q ss_pred --CCCCHHHHHHHHHHH
Q psy16848 460 --PFHTREMIDKFVTDL 474 (514)
Q Consensus 460 --~~~t~e~id~~~~~l 474 (514)
..+.++|++++.+.|
T Consensus 383 T~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 383 TRRGMKEEDMKEIAELI 399 (399)
T ss_dssp HHTT--HHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHhhC
Confidence 466778888776654
No 339
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.77 E-value=2.3e-16 Score=162.21 Aligned_cols=318 Identities=14% Similarity=0.122 Sum_probs=196.2
Q ss_pred ChhHHHHHHHHHHHhCCCCCCcCcc-cCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCc
Q psy16848 31 PKGGRKCLGEALEKFGTGAGGTRNI-SGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAG 109 (514)
Q Consensus 31 ~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~ 109 (514)
++++.+++.+.++.|+... ..+. ......++.+++.+++++|.+++++++||+.|+..++.++ . +||+|++++.
T Consensus 94 ~~~vieAv~~~~~~y~~l~--~~l~~g~~g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~l-~--~GdeVIvs~~ 168 (454)
T TIGR00474 94 AEEAIEAVTDAARGYSNLE--YDLETGKRGSRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNTL-A--KGKEVIVSRG 168 (454)
T ss_pred CHHHHHHHHHHHhcccchh--ccccccccchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHh-C--CcCEEEECCC
Confidence 6889999999998765211 1111 1123567899999999999999999999999988787554 3 9999999988
Q ss_pred cchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccc
Q psy16848 110 NHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVG 189 (514)
Q Consensus 110 ~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (514)
.|...-...
T Consensus 169 e~v~~ggs~----------------------------------------------------------------------- 177 (454)
T TIGR00474 169 ELVEIGGSF----------------------------------------------------------------------- 177 (454)
T ss_pred hhhhhcchh-----------------------------------------------------------------------
Confidence 764321000
Q ss_pred ccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCC
Q psy16848 190 LYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVH 269 (514)
Q Consensus 190 ~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~ 269 (514)
.+...+...|+++++++.++... .+.+.+..+++|+++++++++
T Consensus 178 -----------------------------------~i~~~~~~~G~~~~~v~~~~~~~-l~dle~aI~~~T~lv~~~h~s 221 (454)
T TIGR00474 178 -----------------------------------RIPDVMEQSGAKLVEVGTTNRTH-LKDYEDAITENTALLLKVHTS 221 (454)
T ss_pred -----------------------------------hHHHHHHHcCCEEEEeCCCCCCC-HHHHHHhcCcCCEEEEEEccC
Confidence 00112234466666666422211 223333445679999999999
Q ss_pred CCC--c--cccCHHHHHHHHHHcCCEEEEeccccccccCCCC---CCccc--cCCCccCceEEEcCCcccccCC-CeEEE
Q psy16848 270 SMT--G--AICPLKELCEVSHQHGALTFVDEVHAVGLYGEHG---AGIGE--RDGQLHNMDIISGTLGKAFGNI-GGYIV 339 (514)
Q Consensus 270 npt--G--~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~---~~~~~--~~~~~~~~di~~~S~sK~lg~~-GG~l~ 339 (514)
|++ | ...|+++|.++|++||+++++|.+.+ .++..+ .+..+ ......++|++++|.+|++|++ ||+++
T Consensus 222 N~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG--~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~ 299 (454)
T TIGR00474 222 NYRIVGFTEEVSIAELVALGREHGLPVMEDLGSG--SLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIV 299 (454)
T ss_pred cccccCCCCCCCHHHHHHHHHHcCCeEEEECCCc--ccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEE
Confidence 984 6 57899999999999999999997533 322211 00001 1112458999999999999654 59999
Q ss_pred ecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhch-----------HHHHHHHHHHHHHHHHHHHHhC---CC-
Q psy16848 340 GTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQE-----------GVELRAKHQDIVAYLRNELIQI---GF- 404 (514)
Q Consensus 340 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~-----------~~~~~~~~~~~~~~l~~~L~~~---g~- 404 (514)
+++++++.++.....- .....-..+++..+++..+.... +....++..++++.+.+.|++. ++
T Consensus 300 g~~~~i~~l~~~~l~r--~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~ 377 (454)
T TIGR00474 300 GKKELIERLKKNPLTR--ALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFE 377 (454)
T ss_pred ECHHHHHhhhhchhHH--HHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCce
Confidence 9999888765432111 11333344445555555432211 1122346667777788888663 22
Q ss_pred -ccccCC-----C-------cEEEEEeC-CCccHHHHHHHHHHhCC--eEEecccCCCCCCCCcEEEEEeCCCCCHHHHH
Q psy16848 405 -PVEHTP-----S-------HIIPIKIG-NPALNTKICDMLLKEKG--HYVQPINYPTVPVGEEKIRLAPTPFHTREMID 468 (514)
Q Consensus 405 -~~~~~~-----~-------~~~~i~l~-~~~~~~~~~~~Ll~~~G--I~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id 468 (514)
.+.... | +-+.+.+. ...+..++.+.|. +.. |+.+ ..++.+.+-+. ...++|.+
T Consensus 378 ~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr-~~~~~ii~r--------~~~~~~~ld~r-~~~~~~~~ 447 (454)
T TIGR00474 378 LEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLR-ELPPPIIGR--------IEDDRFLLDLR-TLLEDEEE 447 (454)
T ss_pred EEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHh-cCCCCEEEE--------EECCEEEEEeC-cCCHHHHH
Confidence 222111 1 12334442 3346788888884 665 4443 12456677775 46788888
Q ss_pred HHHHHH
Q psy16848 469 KFVTDL 474 (514)
Q Consensus 469 ~~~~~l 474 (514)
.+++++
T Consensus 448 ~~~~~~ 453 (454)
T TIGR00474 448 LLIEAL 453 (454)
T ss_pred HHHHHh
Confidence 888775
No 340
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=8.3e-16 Score=141.99 Aligned_cols=216 Identities=17% Similarity=0.128 Sum_probs=149.0
Q ss_pred CCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC
Q psy16848 257 VKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN 333 (514)
Q Consensus 257 ~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~ 333 (514)
.+++.+|++.-|.||||.++. +.+|-+++++||++++.|.+|+..+.+-- +.+...+..++.+.+.|+||.-=
T Consensus 177 ~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~ii---fsd~~~~w~~NiilC~SLSK~GL- 252 (417)
T COG3977 177 GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGII---FSDATPLWNENIILCMSLSKLGL- 252 (417)
T ss_pred ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCcee---cccccccCCCCEEEEeehhhcCC-
Confidence 356889999999999999998 78888899999999999999985543221 12222223467899999999543
Q ss_pred CC---eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhh--hchHHHHHHHHHHHHHHHHHHHHhC----CC
Q psy16848 334 IG---GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILS--SQEGVELRAKHQDIVAYLRNELIQI----GF 404 (514)
Q Consensus 334 ~G---G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~----g~ 404 (514)
+| |++++++++++.+.......+. .......+.+...++.-+ +..-+-++--++++.+...+.|+.. .+
T Consensus 253 PG~R~GIiIane~viqaitnmn~iisL--ap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~ 330 (417)
T COG3977 253 PGSRCGIIIANEKVIQAITNMNGIISL--APGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRC 330 (417)
T ss_pred CCcceeEEEccHHHHHHHHhccceeee--cCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccce
Confidence 35 9999999999999887665532 223333333333333111 1111124444556666655555553 34
Q ss_pred ccccCCCc-EEEEEeCC-CccHHHHHHHHHHhCCeEEecccCCCCCCC------CcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 405 PVEHTPSH-IIPIKIGN-PALNTKICDMLLKEKGHYVQPINYPTVPVG------EEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 405 ~~~~~~~~-~~~i~l~~-~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~------~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
.+..+.|. |+|+++.+ +.+..+++++| +++|+.+.||++++...+ ..|+|+++. -.++.+++.+.+|.+
T Consensus 331 ~iHkpEGAIFlWLWf~dLPItt~~LYq~L-Ka~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~--~~~~~ie~Gva~lae 407 (417)
T COG3977 331 LIHKPEGAIFLWLWFKDLPITTEELYQRL-KARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYV--PEPEKIEKGVAILAE 407 (417)
T ss_pred eeecCCcceeehhhhccCCCCHHHHHHHH-HhCeEEEecccccCCCCCCCCCCccceEEEecC--CCHHHHHHHHHHHHH
Confidence 44566666 45566553 46688999999 699999999997665432 479999997 578899999999998
Q ss_pred HHHHc
Q psy16848 477 VWKSL 481 (514)
Q Consensus 477 ~l~~~ 481 (514)
.+++.
T Consensus 408 ~ve~~ 412 (417)
T COG3977 408 EVERA 412 (417)
T ss_pred HHHHH
Confidence 87764
No 341
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.76 E-value=1.6e-16 Score=175.79 Aligned_cols=308 Identities=15% Similarity=0.183 Sum_probs=200.0
Q ss_pred cCcchHHHHHHHHHHhHcCCCcEEEEe-ccccccccchhhccc--cCCCc----eEEecCccchhhhhhhhcCCCCeeec
Q psy16848 56 SGNSLFHEKLEEDVAKLHQKEAGLVFT-SCYVANDSTLFTLGK--MIPGL----HYISDAGNHASMIQGIRNSSAPKIIY 128 (514)
Q Consensus 56 ~~~~~~~~~~~~~la~~~~~~~~i~~~-sGt~a~~~~l~~l~~--~~~gd----~v~~~~~~h~~~~~~~~~~~~~~~~~ 128 (514)
.|+.+...++++++++++|.+.+-+.+ +|++++.++|.++.. ..+|+ +|+++...|.++..+++..|.+++.+
T Consensus 538 qG~l~~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v 617 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVV 617 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEE
Confidence 356688899999999999999876655 455666555544331 23454 69999999999988777777777655
Q ss_pred cCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhH
Q psy16848 129 RHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNM 208 (514)
Q Consensus 129 ~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i 208 (514)
+.+.. |
T Consensus 618 ~~d~~---------------------------------------------------------------G----------- 623 (954)
T PRK05367 618 ACDEN---------------------------------------------------------------G----------- 623 (954)
T ss_pred CCCCC---------------------------------------------------------------C-----------
Confidence 43100 0
Q ss_pred HHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHc
Q psy16848 209 DIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQH 288 (514)
Q Consensus 209 ~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~ 288 (514)
.-|.+.+++.+++. ..++++|++.++++.++...|+++|.++|+++
T Consensus 624 ---------------------------------~iD~~~L~~~i~~~-~~~la~V~it~pst~G~~e~~I~eI~~i~h~~ 669 (954)
T PRK05367 624 ---------------------------------NIDLDDLRAKAEEH-ADNLAAIMITYPSTHGVFEETIREICEIVHEH 669 (954)
T ss_pred ---------------------------------CcCHHHHHHHHhcc-CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHc
Confidence 01455555555432 22477888888877744457899999999999
Q ss_pred CCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC------CC-eEEEecHHHHHHHHhhcC---ceE--
Q psy16848 289 GALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN------IG-GYIVGTKNFIDTIRSYAA---GFI-- 356 (514)
Q Consensus 289 gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~------~G-G~l~~~~~~~~~l~~~~~---~~~-- 356 (514)
|+++++|.++..+..+ +... + ..++|++++|+||+++. +| |++++++++...+..... ...
T Consensus 670 G~~v~VDgA~~~al~~-----l~~p-g-~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~ 742 (954)
T PRK05367 670 GGQVYLDGANMNAQVG-----LARP-G-DIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETG 742 (954)
T ss_pred CCEEEEECcChhhccC-----CCCh-h-hcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCC
Confidence 9999999999854432 1111 1 34799999999999753 33 788887666655432210 000
Q ss_pred ecc-CCcHH-HHHHHHHHH---HHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccCCCc-----EEEE-EeCC--Cc
Q psy16848 357 FTT-SLPPT-VLAGAREAI---RILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHTPSH-----IIPI-KIGN--PA 422 (514)
Q Consensus 357 ~~~-~~~~~-~~~a~~~~l---~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-----~~~i-~l~~--~~ 422 (514)
.+. ..++. ....+..++ ..+..+++.+..+....+++|+.+.|++. .+.+..+.+. ++.+ .++. +.
T Consensus 743 ~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~ 822 (954)
T PRK05367 743 IGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTGI 822 (954)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCCC
Confidence 010 11111 112222233 33334555566666669999999999874 4433332222 3333 2221 24
Q ss_pred cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Q psy16848 423 LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 423 ~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~~ 483 (514)
...++.++|. +.|+......++ ..+.++++++...+++|+|+++++|+.+.+++..
T Consensus 823 ~~~di~krL~-d~G~~~~t~~~p----v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 823 TVDDIAKRLI-DYGFHAPTMSFP----VAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred CHHHHHHHHH-HCCCeEeecCCc----cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 5688999995 999998653432 2568999999999999999999999998887654
No 342
>KOG1405|consensus
Probab=99.75 E-value=1.1e-16 Score=150.63 Aligned_cols=374 Identities=14% Similarity=0.153 Sum_probs=234.4
Q ss_pred CCceeeecccCCCC-------------CChhHHHHHHH-HHHHhCCCCCCcC-cccCcchHHHHHHHHHHhHc--CCCcE
Q psy16848 16 SNRVTCRLSSVQYK-------------VPKGGRKCLGE-ALEKFGTGAGGTR-NISGNSLFHEKLEEDVAKLH--QKEAG 78 (514)
Q Consensus 16 ~g~~~~d~~~~~~~-------------~~~~~~~a~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~--~~~~~ 78 (514)
-|+.++|.+++.++ .||.+.++... ++.+--. . ++. ......++.+.+.+.+.+.- |.+++
T Consensus 66 ~GNYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~~p~~~~~lv-n-RPALg~fP~kd~~~~l~~~ll~~APKG~~~v 143 (484)
T KOG1405|consen 66 IGNYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQQPQNATMLV-N-RPALGNFPPKDFAEKLRQSLLSIAPKGQKQV 143 (484)
T ss_pred cCceEEecCCCeeehhhhhhcccccCCCCHHHHHHhcChHHHHHHh-c-cccccCCChhhHHHHHHHHHHhhCcchHHHH
Confidence 56777788777776 27887776532 2222100 0 111 11223466666666666653 45666
Q ss_pred EEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCc--EEEeecc
Q psy16848 79 LVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPK--LVAFETV 156 (514)
Q Consensus 79 i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~--~~~~~~~ 156 (514)
+..-+|+.||+.|+.+..- .|.+- ..| -..-+.++++..+.....+.|+ ++.|.|.
T Consensus 144 ~tm~cGs~aNEnA~K~afi------------wy~~k-----~rg-----~~~~s~~e~eScm~n~aPg~P~lsvlsF~ga 201 (484)
T KOG1405|consen 144 ITMLCGSCANENAYKTAFI------------WYRAK-----ERG-----QAGFSAEELESCMINQAPGAPDLSVLSFKGA 201 (484)
T ss_pred HHHhccccccHHHHHHHHH------------HHHhh-----cCC-----CCCCCHHHHHHHHhcCCCCCCceeeeeeccc
Confidence 7778999999999977531 01110 001 1122567788888877777775 6778888
Q ss_pred ccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC----ceeeecchHHHHhh
Q psy16848 157 HSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP----EVAIHASMIQGIRN 232 (514)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~----~v~~~~~~~~~~~~ 232 (514)
|| ++..|....+.+ +| +++..+.....+..
T Consensus 202 FH--------------------------GR~~g~lstT~S--------------------KpIHKldiPaFdWPiA~fP~ 235 (484)
T KOG1405|consen 202 FH--------------------------GRTFGSLSTTHS--------------------KPIHKLDIPAFDWPIAPFPR 235 (484)
T ss_pred cc--------------------------cccccccccccC--------------------ccccccCCCCCCCCCCCCcc
Confidence 85 222222221111 11 11111100111110
Q ss_pred CC-------CCEEEecCCChhHHHHHHhhccCC--CceEEEEecCCCCCccccC----HHHHHHHHHHcCCEEEEecccc
Q psy16848 233 SS-------APKIIYRHNDVNHLTQVLENMDVK--IPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA 299 (514)
Q Consensus 233 ~g-------~~~~~v~~~d~~~l~~~l~~~~~~--~~~~vv~~~~~nptG~~~~----l~~l~~l~~~~gv~li~Dea~~ 299 (514)
+. ++=..-+...++++++.+.+...+ ..+++++++.++..|.... ++.|++++++||+.+|+||+++
T Consensus 236 ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQT 315 (484)
T KOG1405|consen 236 YKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQT 315 (484)
T ss_pred ccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeec
Confidence 00 000000012467788888876433 4678999999999998765 8999999999999999999999
Q ss_pred -ccccCCCCCCccccCCCccCceEEEcCCcccccCCCeEEEecHHHHHHHHhhcCceEecc-CCcHHHHHHHHHHHHHhh
Q psy16848 300 -VGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIGGYIVGTKNFIDTIRSYAAGFIFTT-SLPPTVLAGAREAIRILS 377 (514)
Q Consensus 300 -~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~GG~l~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~ 377 (514)
.|..|+.+ ..+++++...+|+| +|||-+-. |||.. ++++... ...-.|++ -+.|.-...+...++.+.
T Consensus 316 GgGaTGk~W--aHehw~l~~PpD~v--TFSKK~q~-gGffh-~~~frpn----~pYrifNTWmGdP~k~lll~~vv~~I~ 385 (484)
T KOG1405|consen 316 GGGATGKFW--AHEHWNLDSPPDVV--TFSKKFQT-GGFFH-DEEFRPN----EPYRIFNTWMGDPSKNLLLEEVVQEIK 385 (484)
T ss_pred CCCccCcee--eehhcCCCCCccce--ehhhhhhc-Ccccc-CcccCCC----chHHHhhhhcCChHHHHHHHHHHHHHh
Confidence 66666543 56778888889999 99999876 56543 3333221 11111122 334555555566666665
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHhC--C----CccccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCC
Q psy16848 378 SQEGVELRAKHQDIVAYLRNELIQI--G----FPVEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGE 451 (514)
Q Consensus 378 ~~~~~~~~~~~~~~~~~l~~~L~~~--g----~~~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~ 451 (514)
+++ +.++.....+.|.+.|.++ . +.-...+|.|..+.++++...+.++..+ +-+|+.+. ..+.
T Consensus 386 ~~~---Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~~Rdk~i~~~-~~nGv~~G-------GCg~ 454 (484)
T KOG1405|consen 386 RED---LLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSGSIRDKLILIA-RLNGVNLG-------GCGD 454 (484)
T ss_pred HHH---HHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCChHHHHHHHHHH-HHcCceec-------cccc
Confidence 555 6777788888888888776 1 2223456778889999888888999999 49999974 3346
Q ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 452 EKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 452 ~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
..||+-+++..++...+-+++++++++..
T Consensus 455 ~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 455 KSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred ceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 78999999888888999999999988764
No 343
>PLN02263 serine decarboxylase
Probab=99.75 E-value=1.8e-15 Score=154.17 Aligned_cols=297 Identities=13% Similarity=0.064 Sum_probs=204.5
Q ss_pred CcchHHHHHHHHHHhHcCCCc----EEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCC
Q psy16848 57 GNSLFHEKLEEDVAKLHQKEA----GLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHND 132 (514)
Q Consensus 57 ~~~~~~~~~~~~la~~~~~~~----~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d 132 (514)
+..++..++-+++++++|.+. +.++++||++|+.++.+.....+...++++..+|.|+..+++..|.+++.++-++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~ 209 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLV 209 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCC
Confidence 356777788899999998642 6888889999999998765544556899999999999999999988776554310
Q ss_pred hHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHH
Q psy16848 133 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIIS 212 (514)
Q Consensus 133 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~ 212 (514)
.|
T Consensus 210 ---------------------------------------------------------------~g--------------- 211 (470)
T PLN02263 210 ---------------------------------------------------------------SG--------------- 211 (470)
T ss_pred ---------------------------------------------------------------CC---------------
Confidence 00
Q ss_pred hhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCC--
Q psy16848 213 GTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGA-- 290 (514)
Q Consensus 213 ~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv-- 290 (514)
.-|.+.+++.+.+.. .++.+|+.+..+.++|.+-|+++|.++|+++|+
T Consensus 212 -----------------------------~mD~~aL~~aI~~d~-~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~ 261 (470)
T PLN02263 212 -----------------------------EIDCADFKAKLLANK-DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQ 261 (470)
T ss_pred -----------------------------cCcHHHHHHHHHhCC-CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCcc
Confidence 014555555555432 235677778888999999999999999999997
Q ss_pred ---EEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC-CC-eEEEecHHHHHHHHhhcCc-----eEeccC
Q psy16848 291 ---LTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN-IG-GYIVGTKNFIDTIRSYAAG-----FIFTTS 360 (514)
Q Consensus 291 ---~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~-~G-G~l~~~~~~~~~l~~~~~~-----~~~~~~ 360 (514)
++++|.+++-... +.......+.. ...+|.++.++||+++. .+ |+++.++..++.+...... .+...+
T Consensus 262 ~~iwlHVDAA~GG~~l-Pf~~~~~~~df-~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gS 339 (470)
T PLN02263 262 DRFYIHCDGALFGLMM-PFVKRAPKVTF-KKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGS 339 (470)
T ss_pred CCeeEEEeccchhhHh-hhcccccccCC-CcCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCC
Confidence 9999999982222 11111111222 23489999999999865 34 7777776555433221110 111112
Q ss_pred CcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccc-cCCCcEEEEEeCCCccHHHHHHHHHHhCCeEE
Q psy16848 361 LPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVE-HTPSHIIPIKIGNPALNTKICDMLLKEKGHYV 439 (514)
Q Consensus 361 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v 439 (514)
-+......+..+|..+..+++.+..++..++++++.+.|++.|+... .+....+.+.-+. +... .+|..+
T Consensus 340 R~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~~V~f~~p~--------~~~~-~~gW~L 410 (470)
T PLN02263 340 RNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFERPK--------DEEF-VRRWQL 410 (470)
T ss_pred CCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCceEEEEecCc--------hHHh-hcceEE
Confidence 23334556667777776778888999999999999999999887654 4455565565332 1112 467766
Q ss_pred ecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 440 QPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 440 ~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
.. ..+.+++.+...++.+.+|++++.|++....
T Consensus 411 ~~--------~~~~~Hivvmphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 411 AC--------QGNIAHVVVMPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred cc--------CCCcEEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 52 1246899998878999999999999987664
No 344
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.75 E-value=4.4e-17 Score=163.41 Aligned_cols=234 Identities=19% Similarity=0.233 Sum_probs=159.4
Q ss_pred cchHHHHHHHHHHhHcCCCcEEEEecccc-ccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHH
Q psy16848 58 NSLFHEKLEEDVAKLHQKEAGLVFTSCYV-ANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHL 136 (514)
Q Consensus 58 ~~~~~~~~~~~la~~~~~~~~i~~~sGt~-a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l 136 (514)
......+.++.+|+.+|.++.+|.++||+ +|++++.+++. |||.|+++++.|.|++.++.++|+.++.+.+.+.
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~--~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~--- 138 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCR--PGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDN--- 138 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTT--TTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE----
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcC--CCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCcc---
Confidence 35678999999999999999999999876 59999999987 9999999999999999999999999887654110
Q ss_pred HHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhcc
Q psy16848 137 TQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLV 216 (514)
Q Consensus 137 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~ 216 (514)
..|+
T Consensus 139 ----------------------------------------------------------~~gi------------------ 142 (417)
T PF01276_consen 139 ----------------------------------------------------------EYGI------------------ 142 (417)
T ss_dssp ----------------------------------------------------------TTS-------------------
T ss_pred ----------------------------------------------------------ccCC------------------
Confidence 0010
Q ss_pred CCceeeecchHHHHhhCCCCEEEec--CCChhHHHHHHhhccCCC-ceEEEEecCCCCCccccCHHHHHHHHHHcCCEEE
Q psy16848 217 NPEVAIHASMIQGIRNSSAPKIIYR--HNDVNHLTQVLENMDVKI-PKLVAFETVHSMTGAICPLKELCEVSHQHGALTF 293 (514)
Q Consensus 217 ~~~v~~~~~~~~~~~~~g~~~~~v~--~~d~~~l~~~l~~~~~~~-~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li 293 (514)
...++ .-+.+.+++.+++....+ .+++++++| +..|.+.++++|.++|++++++|+
T Consensus 143 --------------------~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~P-TY~Gv~~di~~I~~~~h~~~~~ll 201 (417)
T PF01276_consen 143 --------------------IGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSP-TYYGVCYDIKEIAEICHKHGIPLL 201 (417)
T ss_dssp --------------------BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEE
T ss_pred --------------------ccCCChhhhhHHHHHHHHHhCccccCceEEEEeCC-CCCeEEECHHHHHHHhcccCCEEE
Confidence 00111 113366777777764332 355888887 466999999999999999999999
Q ss_pred Eecccc--ccccCCCCCCccccCCCccCce-------EEEcCCcccccC--CCeEEEecHHH---HHHHHhhcCceEecc
Q psy16848 294 VDEVHA--VGLYGEHGAGIGERDGQLHNMD-------IISGTLGKAFGN--IGGYIVGTKNF---IDTIRSYAAGFIFTT 359 (514)
Q Consensus 294 ~Dea~~--~g~~g~~~~~~~~~~~~~~~~d-------i~~~S~sK~lg~--~GG~l~~~~~~---~~~l~~~~~~~~~~~ 359 (514)
+||||+ +++. + +. ......++| +++.|.||.+++ .++++..+.+. .+++.....-+ .++
T Consensus 202 vDEAhGah~~F~-~----lp-~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~-~TT 274 (417)
T PF01276_consen 202 VDEAHGAHFGFH-P----LP-RSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMH-QTT 274 (417)
T ss_dssp EE-TT-TTGGCS-G----GG-TTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHH-S-S
T ss_pred EEccccccccCC-C----Cc-cchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHH-cCC
Confidence 999998 2222 1 11 111234666 999999999976 34777655432 24443322111 155
Q ss_pred CCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy16848 360 SLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELI 400 (514)
Q Consensus 360 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 400 (514)
+++.+.++.+-.+...+......++.++..++.+.+++.++
T Consensus 275 SPSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~ 315 (417)
T PF01276_consen 275 SPSYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKIN 315 (417)
T ss_dssp S--HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 67777777777777766445567788888888888888884
No 345
>KOG0633|consensus
Probab=99.74 E-value=1.5e-16 Score=143.97 Aligned_cols=270 Identities=15% Similarity=0.092 Sum_probs=193.8
Q ss_pred CCCceeeecCchhhHHHHHhhccCC--ceee--ec---chHHHHhhCCCCEEEec-CCChhHHHHHHhhcc--CCCceEE
Q psy16848 194 HGAGIGERDGQLHNMDIISGTLVNP--EVAI--HA---SMIQGIRNSSAPKIIYR-HNDVNHLTQVLENMD--VKIPKLV 263 (514)
Q Consensus 194 ~~~g~~~~~G~~~~i~~~~~~l~~~--~v~~--~~---~~~~~~~~~g~~~~~v~-~~d~~~l~~~l~~~~--~~~~~~v 263 (514)
+..-++.+.|+.+.|+.++...++| +.++ |. .|.-.....+++++.+| ..|+....+.+.+.. ..++|.+
T Consensus 85 t~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~ 164 (375)
T KOG0633|consen 85 TSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCI 164 (375)
T ss_pred CccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEE
Confidence 4567889999999999999999999 4433 33 44455567789999999 446555444444432 3468999
Q ss_pred EEecCCCCCccccCHHHHHHHHHHc-CCEEEEeccccccc-cCCCCCCccccCCCccCceEEEcCCcccccCCC---eEE
Q psy16848 264 AFETVHSMTGAICPLKELCEVSHQH-GALTFVDEVHAVGL-YGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG---GYI 338 (514)
Q Consensus 264 v~~~~~nptG~~~~l~~l~~l~~~~-gv~li~Dea~~~g~-~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G---G~l 338 (514)
++++|.||||..+..+.|.++..-- +.++++||+|-.+. .+..-.... .-.+-+++.++||.+|..| |+-
T Consensus 165 F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~-----kYpNLivlqTlSKsfGLAGiRvG~~ 239 (375)
T KOG0633|consen 165 FLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVK-----KYPNLIVLQTLSKSFGLAGIRVGYG 239 (375)
T ss_pred EEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhH-----hCCceeehhhhhhhcCcceeEeecc
Confidence 9999999999999988888887654 79999999998332 111111111 2245688889999999988 988
Q ss_pred EecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCc--cccCCCcEEE
Q psy16848 339 VGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFP--VEHTPSHIIP 415 (514)
Q Consensus 339 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~--~~~~~~~~~~ 415 (514)
+.+..+++.+.+...++ +.|.....++++++..-....++..+..+.+.+.++.+.|.+. ++. +.+..++|+.
T Consensus 240 ~~~~~ia~iln~~KaPY----NiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiL 315 (375)
T KOG0633|consen 240 AFPLSIAEILNRAKAPY----NISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFIL 315 (375)
T ss_pred cccHHHHHHHHhccCCc----cccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEE
Confidence 99999999998877776 5566666666777763333456778888888889999999887 332 2244667888
Q ss_pred EEeCCC--ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 416 IKIGNP--ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 416 i~l~~~--~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
+++.++ .-+..+...+..+.||.|+-... .....+++|++.+ |+|+.+.+++.++++
T Consensus 316 i~v~~~~n~~akkly~q~at~~gVvVRfrgs--e~~c~G~lRitvG---t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 316 IEVTGGDNGMAKKLYKQDATKMGVVVRFRGS--EEGCKGYLRITVG---TPEENTVLMKCLKQF 374 (375)
T ss_pred EEEcCCCcHHHHHHHHHHHHhcceEEEEcCC--ccccceeEEEEcC---CcccchHHHHHHHhh
Confidence 887532 23444555554689999973221 1224689999999 899999999998875
No 346
>KOG2862|consensus
Probab=99.74 E-value=3.9e-15 Score=138.39 Aligned_cols=236 Identities=19% Similarity=0.202 Sum_probs=179.3
Q ss_pred hhCCCCEEEec-----CCChhHHHHHHhhccCCCceEEEEecCCCCCccccC-HHHHHHHHHHcCCEEEEeccccccccC
Q psy16848 231 RNSSAPKIIYR-----HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP-LKELCEVSHQHGALTFVDEVHAVGLYG 304 (514)
Q Consensus 231 ~~~g~~~~~v~-----~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~-l~~l~~l~~~~gv~li~Dea~~~g~~g 304 (514)
++.|+++..++ .-.++.+.+.|.++ +++++++++..+.||+..| ++.+.++|++|+.++++|.+.++|..
T Consensus 112 ~r~ga~V~~v~~~~G~~~~le~i~~~lsqh---~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt- 187 (385)
T KOG2862|consen 112 RRYGAEVDVVEADIGQAVPLEEITEKLSQH---KPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGT- 187 (385)
T ss_pred HhhCceeeEEecCcccCccHHHHHHHHHhc---CCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCc-
Confidence 34455555554 12467777777764 4789999999999999999 78889999999999999999997764
Q ss_pred CCCCCccccCCCccCceEEEcCCcccccC-CC-eEEEecHHHHHHHHhhcCc---e------------------EeccCC
Q psy16848 305 EHGAGIGERDGQLHNMDIISGTLGKAFGN-IG-GYIVGTKNFIDTIRSYAAG---F------------------IFTTSL 361 (514)
Q Consensus 305 ~~~~~~~~~~~~~~~~di~~~S~sK~lg~-~G-G~l~~~~~~~~~l~~~~~~---~------------------~~~~~~ 361 (514)
++.-.+++.|+.....-|++|. +| +.+..++...++++..... + .|..+.
T Consensus 188 -------~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~ 260 (385)
T KOG2862|consen 188 -------EFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTP 260 (385)
T ss_pred -------cceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCC
Confidence 2222256899998888999975 56 8888888888888755431 0 022356
Q ss_pred cHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccC----CCc-EEEEEeCCCccHHHHHHHHHHhCC
Q psy16848 362 PPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHT----PSH-IIPIKIGNPALNTKICDMLLKEKG 436 (514)
Q Consensus 362 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~-~~~i~l~~~~~~~~~~~~Ll~~~G 436 (514)
|...+..+.++|..+.++++++..++.++..++++..|+++|++.... ..+ .-.+.+|...+..+++.+++...+
T Consensus 261 pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~ 340 (385)
T KOG2862|consen 261 PVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYV 340 (385)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCCHHHHHHHHHHhcC
Confidence 777889999999999999999999999999999999999998775322 122 445777878889999999985557
Q ss_pred eEEecccCCCCCCCCcEEEEEeCC-CCCHHHHHHHHHHHHHHHHH
Q psy16848 437 HYVQPINYPTVPVGEEKIRLAPTP-FHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 437 I~v~~~~~~~~~~~~~~iRl~~~~-~~t~e~id~~~~~l~~~l~~ 480 (514)
+.+..+..+ .....+|+.+.. .-+.|.++..++.|+..+.+
T Consensus 341 vei~gglg~---~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 341 VEIGGGLGP---TVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred EEeccccCC---CcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 887766553 345699998743 34668899999999887765
No 347
>KOG0053|consensus
Probab=99.74 E-value=4.5e-16 Score=152.78 Aligned_cols=288 Identities=17% Similarity=0.186 Sum_probs=193.3
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+....+++.++++.|.++++.++||..|+..++..+.. +|+++++...-|..+..-++
T Consensus 76 nPt~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L~~--~g~~iV~~~~~Y~gT~~~l~------------------- 134 (409)
T KOG0053|consen 76 NPTRDVLESGIAALEGAAHALLFSSGMAAITVALLHLLP--AGDHIVATGDVYGGTLRILR------------------- 134 (409)
T ss_pred CCchHHHHHHHHHHhCCceEEEecccHHHHHHHHHHhcC--CCCcEEEeCCCcccHHHHHH-------------------
Confidence 456788999999999999999999999999999988876 89988887766666552221
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 135 -------------------------------------------------------------------------------- 134 (409)
T KOG0053|consen 135 -------------------------------------------------------------------------------- 134 (409)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
.....+|.+..+++..+++.+++.+++ ++++|.+|+|.||+..+.|+++|+++|+++|+++++|+..
T Consensus 135 ---------~~~~~~gie~~~vd~~~~~~~~~~i~~----~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf 201 (409)
T KOG0053|consen 135 ---------KFLPKFGGEGDFVDVDDLKKILKAIKE----NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTF 201 (409)
T ss_pred ---------HHHHHhCceeeeechhhHHHHHHhhcc----CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCc
Confidence 222345666777776677777666654 6999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCCC----eEEEec-HHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG----GYIVGT-KNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G----G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
+-+.. ...+..++|||+.|.+|.+|+.+ |.++.+ +++.+.++...... ++..++..+......+
T Consensus 202 ~~p~~---------~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~l--g~~~~p~~~~ll~Rgl 270 (409)
T KOG0053|consen 202 GSPYN---------QDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDL--GWCEDPFDLFLLSRGL 270 (409)
T ss_pred Ccccc---------cChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHh--cCCCCHHHHHHHhcCc
Confidence 83321 22334589999999999998743 888775 88888887766444 4467777777666655
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhC---------CCcccc-----------CCCcEEEEEeCCCccHHHHHHHHHH
Q psy16848 374 RILSSQEGVELRAKHQDIVAYLRNELIQI---------GFPVEH-----------TPSHIIPIKIGNPALNTKICDMLLK 433 (514)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------g~~~~~-----------~~~~~~~i~l~~~~~~~~~~~~Ll~ 433 (514)
+.+. -+.++..+++..+.+.|+.. |++-.+ ..|.++.+.......+.++++.| +
T Consensus 271 ktl~-----lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~~L-K 344 (409)
T KOG0053|consen 271 KTLH-----LRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYDAL-K 344 (409)
T ss_pred chhh-----hhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCHHHHHHHHHhh-h
Confidence 5331 13344445555555555554 221100 01223333344444566676666 2
Q ss_pred hCCeEEecccC------CCC-------------CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 434 EKGHYVQPINY------PTV-------------PVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 434 ~~GI~v~~~~~------~~~-------------~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
=.-...+-|.. |.. ...++.+|+|++. |+++.+++-+.++++.+
T Consensus 345 ~~~~a~SlG~~eSL~~~p~~mth~~~~e~~~~~Gi~~~LVRvSVGi----Ed~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 345 LFTKAPSLGGNESLAEPPAIMTHASELEEREKFGIDPNLVRVSVGI----EDIEDLIKDFQQALEKA 407 (409)
T ss_pred hhhcccCcCccchhhcchhhhccCCCHHHHHhcCCCCCcEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 22122221111 010 1136899999993 55666666666666543
No 348
>PLN02590 probable tyrosine decarboxylase
Probab=99.73 E-value=1.9e-15 Score=157.87 Aligned_cols=314 Identities=14% Similarity=0.091 Sum_probs=203.4
Q ss_pred cchHHHHHHHHHHhHcCCCc---------EEEEeccccccccchhhcccc---------CCCceEEecCccchhhhhhhh
Q psy16848 58 NSLFHEKLEEDVAKLHQKEA---------GLVFTSCYVANDSTLFTLGKM---------IPGLHYISDAGNHASMIQGIR 119 (514)
Q Consensus 58 ~~~~~~~~~~~la~~~~~~~---------~i~~~sGt~a~~~~l~~l~~~---------~~gd~v~~~~~~h~~~~~~~~ 119 (514)
..++..++-+++++++|.+. .+++++||+||+.+|.+.... .+.-.|++++.+|.|+..+++
T Consensus 168 ~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ 247 (539)
T PLN02590 168 ATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACL 247 (539)
T ss_pred hHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHH
Confidence 35677778889999998663 578889999998888764320 133367789999999999999
Q ss_pred cCCCC---eeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCC
Q psy16848 120 NSSAP---KIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGA 196 (514)
Q Consensus 120 ~~~~~---~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 196 (514)
..|.. ++.++-+.. +.|
T Consensus 248 ilGlg~~~vr~Vp~d~~---------------------~~~--------------------------------------- 267 (539)
T PLN02590 248 IGGIHEENIRLLKTDSS---------------------TNY--------------------------------------- 267 (539)
T ss_pred HcCCCcccEEEEeCCCC---------------------CCC---------------------------------------
Confidence 98873 332221100 000
Q ss_pred ceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhcc--CCCceEEEEecCCCCCcc
Q psy16848 197 GIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMD--VKIPKLVAFETVHSMTGA 274 (514)
Q Consensus 197 g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~--~~~~~~vv~~~~~nptG~ 274 (514)
.-|.+.+++.+++.. ...+-+|+.+.....+|.
T Consensus 268 ---------------------------------------------~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGa 302 (539)
T PLN02590 268 ---------------------------------------------GMPPESLEEAISHDLAKGFIPFFICATVGTTSSAA 302 (539)
T ss_pred ---------------------------------------------cCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcc
Confidence 003444444444321 223567788888899999
Q ss_pred ccCHHHHHHHHHHcCCEEEEeccccccc-cCCCCCCccccCCCccCceEEEcCCcccccC-CC-eEEEecH--HHHHHHH
Q psy16848 275 ICPLKELCEVSHQHGALTFVDEVHAVGL-YGEHGAGIGERDGQLHNMDIISGTLGKAFGN-IG-GYIVGTK--NFIDTIR 349 (514)
Q Consensus 275 ~~~l~~l~~l~~~~gv~li~Dea~~~g~-~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~-~G-G~l~~~~--~~~~~l~ 349 (514)
+-|+++|.++|++||+|+++|.+|+... ..+..+.+ ..+ ...+|.++.++||++.. .+ |+++.++ .+.+.+.
T Consensus 303 iDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~--~~G-ie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~ 379 (539)
T PLN02590 303 VDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKF--IDG-IENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALK 379 (539)
T ss_pred cCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHH--hcC-CccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhh
Confidence 9999999999999999999999999322 22221111 223 24689999999999865 33 6665543 2333222
Q ss_pred hhcC--------------ceEeccCC-cHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccC-CCc
Q psy16848 350 SYAA--------------GFIFTTSL-PPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHT-PSH 412 (514)
Q Consensus 350 ~~~~--------------~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~ 412 (514)
.... ...++... -......+..+|+.+..+++.++.++..++++++.+.+++. ++++..+ .-+
T Consensus 380 ~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~ 459 (539)
T PLN02590 380 TNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFS 459 (539)
T ss_pred cCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceE
Confidence 1100 00011111 12345556666777667788899999999999999999887 6776654 344
Q ss_pred EEEEEeCCC--------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeC-CCCCHHHHHHHHHHHHHHHHHcCC
Q psy16848 413 IIPIKIGNP--------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPT-PFHTREMIDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 413 ~~~i~l~~~--------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~-~~~t~e~id~~~~~l~~~l~~~~~ 483 (514)
++.|++... ....++.+++.+...+++++... .+..++|+++. ..+++++++.+++.|.+..+++.+
T Consensus 460 iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~----~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~ 535 (539)
T PLN02590 460 LVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTAL----SGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTR 535 (539)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 667776421 11346777775334455554332 34669999884 456688999999999998877653
No 349
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.73 E-value=1.3e-15 Score=161.99 Aligned_cols=310 Identities=14% Similarity=0.086 Sum_probs=198.6
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccc-cccchhhccccCCCceEEecCccchhhhhh-hhcCCCCeeeccCCChHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVA-NDSTLFTLGKMIPGLHYISDAGNHASMIQG-IRNSSAPKIIYRHNDVNHL 136 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a-~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~-~~~~~~~~~~~~~~d~~~l 136 (514)
.....+.++..|+.||+++..|.++||++ |.+++.+++. +||.|+++++.|.|+.++ +.++|+.++.+.+.. +
T Consensus 173 eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~--~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~-n-- 247 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLT--PGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR-N-- 247 (720)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcC--CCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc-c--
Confidence 45678999999999999999999999875 8999988877 999999999999999996 999999999765420 0
Q ss_pred HHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhcc
Q psy16848 137 TQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLV 216 (514)
Q Consensus 137 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~ 216 (514)
..|+.
T Consensus 248 ----------------------------------------------------------~~Gi~----------------- 252 (720)
T PRK13578 248 ----------------------------------------------------------PFGFI----------------- 252 (720)
T ss_pred ----------------------------------------------------------ccCCc-----------------
Confidence 00000
Q ss_pred CCceeeecchHHHHhhCCCCEEEecCC--ChhHHHHHHhhcc-C-----CCceEEEEecCCCCCccccCHHHHHHH-HHH
Q psy16848 217 NPEVAIHASMIQGIRNSSAPKIIYRHN--DVNHLTQVLENMD-V-----KIPKLVAFETVHSMTGAICPLKELCEV-SHQ 287 (514)
Q Consensus 217 ~~~v~~~~~~~~~~~~~g~~~~~v~~~--d~~~l~~~l~~~~-~-----~~~~~vv~~~~~nptG~~~~l~~l~~l-~~~ 287 (514)
-.++.. +.+.+++.+++.. . +..++++++++ +..|.++++++|.++ ++.
T Consensus 253 ---------------------g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~ 310 (720)
T PRK13578 253 ---------------------GGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHL 310 (720)
T ss_pred ---------------------CCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhcc
Confidence 000000 2244556665542 1 12588888887 567999999999998 688
Q ss_pred cCCEEEEecccc-ccccCCCCCCccccCCCccCce----EEEcCCcccccC--CCeEEEecHHHH---------HHHHhh
Q psy16848 288 HGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNMD----IISGTLGKAFGN--IGGYIVGTKNFI---------DTIRSY 351 (514)
Q Consensus 288 ~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~d----i~~~S~sK~lg~--~GG~l~~~~~~~---------~~l~~~ 351 (514)
++ +|++||||+ ...+.+..+.+.+. .+..++| +++-|.||.+++ .++++..+...+ +++...
T Consensus 311 ~~-~llvDEAhgah~~F~p~~~~~p~~-al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~a 388 (720)
T PRK13578 311 CD-YILFDSAWVGYEQFIPMMADCSPL-LLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNA 388 (720)
T ss_pred CC-cEEEeCcchhhhccCcccccCChh-hhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHH
Confidence 88 999999998 22222211112211 1244677 999999999976 236664433221 233222
Q ss_pred cCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH-HhC-CCccccC--------------------
Q psy16848 352 AAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNEL-IQI-GFPVEHT-------------------- 409 (514)
Q Consensus 352 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~-g~~~~~~-------------------- 409 (514)
..-+ .+++++.+.++.+-.+-..+..+...++.+...++...+++.+ +.. ++.+..+
T Consensus 389 l~m~-qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~ 467 (720)
T PRK13578 389 FMLH-ASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDL 467 (720)
T ss_pred HHHH-cCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccc
Confidence 1111 1445566666655555555543344566777777777777777 333 3332210
Q ss_pred -------C----------------Cc-EEEEEeCCCcc------------HHHHHHHHHHhCCeEEecccCCCCCCCCcE
Q psy16848 410 -------P----------------SH-IIPIKIGNPAL------------NTKICDMLLKEKGHYVQPINYPTVPVGEEK 453 (514)
Q Consensus 410 -------~----------------~~-~~~i~l~~~~~------------~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~ 453 (514)
. .+ -+.+..+. .+ ...+.+.|. ++||.+. ..+...
T Consensus 468 ~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G-~~~~~G~~~~~Gipg~~l~~~L~-e~gI~~E-------~~d~~~ 538 (720)
T PRK13578 468 RFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPG-IDAETGEYEDFGIPATILANYLR-ENGIVPE-------KCDLNS 538 (720)
T ss_pred cccccccCccccccccccccccccCCceEEEEcCC-cCcccccccccCccHHHHHHHHH-HcCCEEE-------ecCCCe
Confidence 0 01 11222221 22 466777774 7799986 233456
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 454 IRLAPTPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 454 iRl~~~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
+-+-++...|++++++++++|.++.+.++
T Consensus 539 vL~l~s~g~t~~~~~~Lv~aL~~f~~~~~ 567 (720)
T PRK13578 539 ILFLLTPAEDMAKLQQLVAMLARFEKHIE 567 (720)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 77778888999999999999998866443
No 350
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.73 E-value=1.1e-15 Score=166.23 Aligned_cols=307 Identities=15% Similarity=0.169 Sum_probs=206.6
Q ss_pred ccCcchHHHHHHHHHHhHcCCCcE-EEEeccccccccchhhccc------cCCCceEEecCccchhhhhhhhcCCCCeee
Q psy16848 55 ISGNSLFHEKLEEDVAKLHQKEAG-LVFTSCYVANDSTLFTLGK------MIPGLHYISDAGNHASMIQGIRNSSAPKII 127 (514)
Q Consensus 55 ~~~~~~~~~~~~~~la~~~~~~~~-i~~~sGt~a~~~~l~~l~~------~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~ 127 (514)
..|+.+...++++++++++|.+.+ ++.++|++|..++|.++.. -+..+.|+++...|......++.+|.+++.
T Consensus 525 sqG~lq~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~ 604 (939)
T TIGR00461 525 VEGYQELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVP 604 (939)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEE
Confidence 456778899999999999999865 5556677776655555431 024578999999998877666666666655
Q ss_pred ccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhh
Q psy16848 128 YRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHN 207 (514)
Q Consensus 128 ~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~ 207 (514)
++.+. .|
T Consensus 605 V~~d~---------------------------------------------------------------~G---------- 611 (939)
T TIGR00461 605 VNCDQ---------------------------------------------------------------DG---------- 611 (939)
T ss_pred eccCC---------------------------------------------------------------CC----------
Confidence 44310 00
Q ss_pred HHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccC-HHHHHHHHH
Q psy16848 208 MDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP-LKELCEVSH 286 (514)
Q Consensus 208 i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~-l~~l~~l~~ 286 (514)
.-|.+.+++.+++. .+++++|++++++| .|.+.+ +++|.++|+
T Consensus 612 ----------------------------------~iDle~L~~~i~~~-~~~taaV~iT~pst-~G~~e~~I~eI~~iah 655 (939)
T TIGR00461 612 ----------------------------------NIDLVDLKNKAEQH-GDELAAVMVTYPST-HGVFEPTIQHACDIVH 655 (939)
T ss_pred ----------------------------------CcCHHHHHHHHhhc-CCceEEEEEEeCCc-CceecccHHHHHHHHH
Confidence 11555666666542 24689999999998 688877 999999999
Q ss_pred HcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC------CC-eEEEecHHHHHHHHhhcCce----
Q psy16848 287 QHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN------IG-GYIVGTKNFIDTIRSYAAGF---- 355 (514)
Q Consensus 287 ~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~------~G-G~l~~~~~~~~~l~~~~~~~---- 355 (514)
++|.++++|.++..+..+ +... + ..++|++++|.||+++. +| |++.+++++...+....-..
T Consensus 656 ~~G~~v~VDgAq~~al~~-----l~~P-g-~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~ 728 (939)
T TIGR00461 656 SFGGQVYLDGANMNAQVG-----LTSP-G-DLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITG 728 (939)
T ss_pred HcCCEEEEEecChhhCCC-----CCCc-c-ccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccC
Confidence 999999999999743321 1111 1 45899999999997752 33 99999887666554211000
Q ss_pred -------Eec---cCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccC--CCcE---EEEEeCC
Q psy16848 356 -------IFT---TSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHT--PSHI---IPIKIGN 420 (514)
Q Consensus 356 -------~~~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~---~~i~l~~ 420 (514)
+-. ...+...+..+...+..+..+++.+..+....+++|+.+.|.+ ++++..+ .+.+ +.+.++.
T Consensus 729 ~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~ 807 (939)
T TIGR00461 729 IGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRP 807 (939)
T ss_pred CCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccc
Confidence 000 1122333344444555555677788888888999999999988 4544322 2232 3344442
Q ss_pred -----CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Q psy16848 421 -----PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 421 -----~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~~ 483 (514)
+....+++++|+ +.|+......++ . .+.+-+.++...+++|+|+++++|.++.+++..
T Consensus 808 ~~~~~g~~~~dIakrL~-d~G~hapt~~~p---v-~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 808 LKAKTGIEAIDVAKRLQ-DYGFHAPTLSFP---V-PGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred hhhhcCCCHHHHHHHHH-hCCeeccccCCc---c-CCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 245789999997 999986543322 1 236777777788999999999999998877654
No 351
>PLN02880 tyrosine decarboxylase
Probab=99.73 E-value=9.6e-16 Score=160.04 Aligned_cols=312 Identities=14% Similarity=0.078 Sum_probs=197.7
Q ss_pred cchHHHHHHHHHHhHcCCCc---------EEEEeccccccccchhhcccc--------C-CCceEEecCccchhhhhhhh
Q psy16848 58 NSLFHEKLEEDVAKLHQKEA---------GLVFTSCYVANDSTLFTLGKM--------I-PGLHYISDAGNHASMIQGIR 119 (514)
Q Consensus 58 ~~~~~~~~~~~la~~~~~~~---------~i~~~sGt~a~~~~l~~l~~~--------~-~gd~v~~~~~~h~~~~~~~~ 119 (514)
..++..++-+++++++|.+. .+++++||++|+.+|.+.... + +.-.|++++..|.++..+++
T Consensus 120 ~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~ 199 (490)
T PLN02880 120 ATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQ 199 (490)
T ss_pred cHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHH
Confidence 35677788899999998664 577788899999888764320 0 22367789999999999999
Q ss_pred cCCCC---eeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCC
Q psy16848 120 NSSAP---KIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGA 196 (514)
Q Consensus 120 ~~~~~---~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 196 (514)
..|.. ++.++-+. ++.|
T Consensus 200 ~lGlg~~~v~~Vp~d~---------------------~~~~--------------------------------------- 219 (490)
T PLN02880 200 IAGIHPENCRLLKTDS---------------------STNY--------------------------------------- 219 (490)
T ss_pred HcCCCHHHEEEeecCC---------------------CcCC---------------------------------------
Confidence 99874 22222100 0000
Q ss_pred ceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhcc--CCCceEEEEecCCCCCcc
Q psy16848 197 GIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMD--VKIPKLVAFETVHSMTGA 274 (514)
Q Consensus 197 g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~--~~~~~~vv~~~~~nptG~ 274 (514)
.-|.+.+++.+++.. ...+-+|+.+....++|.
T Consensus 220 ---------------------------------------------~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~Ga 254 (490)
T PLN02880 220 ---------------------------------------------ALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTA 254 (490)
T ss_pred ---------------------------------------------cCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcc
Confidence 003444555554321 223567788888899999
Q ss_pred ccCHHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCccCceEEEcCCcccccC-CC-eEEEecH-H-HHHHHH
Q psy16848 275 ICPLKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLHNMDIISGTLGKAFGN-IG-GYIVGTK-N-FIDTIR 349 (514)
Q Consensus 275 ~~~l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~~di~~~S~sK~lg~-~G-G~l~~~~-~-~~~~l~ 349 (514)
+.|+++|.++|++||+++++|.+|+.+.. .+..+. ...+ ...+|.++.++||+++. .| |+++.++ + +.+.+.
T Consensus 255 iDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~--~l~g-ie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~ 331 (490)
T PLN02880 255 VDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRH--YIDG-VEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLS 331 (490)
T ss_pred cCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHH--HhcC-chhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHc
Confidence 99999999999999999999999995433 111100 1222 24689999999999865 44 7777653 2 223222
Q ss_pred hhcCc-----------e---Eecc-CCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccC-CCc
Q psy16848 350 SYAAG-----------F---IFTT-SLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHT-PSH 412 (514)
Q Consensus 350 ~~~~~-----------~---~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~ 412 (514)
..... + .++. .........+...|+.+..+++.++.++..++++++.+.+++. ++++..+ ..+
T Consensus 332 ~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~ 411 (490)
T PLN02880 332 TNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFS 411 (490)
T ss_pred cCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceE
Confidence 11000 0 0000 0011112333344555555666666666679999999999876 7776654 455
Q ss_pred EEEEEeCCC-c-------cHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCC-HHHHHHHHHHHHHHHHHc
Q psy16848 413 IIPIKIGNP-A-------LNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHT-REMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 413 ~~~i~l~~~-~-------~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t-~e~id~~~~~l~~~l~~~ 481 (514)
++.++++.. . ...++.++|.++..+.+..... .+..++|+++....| ++|++.+++.|.++.+++
T Consensus 412 iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~----~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~ 485 (490)
T PLN02880 412 LVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVL----SGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKL 485 (490)
T ss_pred EEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEE----CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence 777777531 1 1235666775445666664433 346799999976555 589999999999987764
No 352
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.73 E-value=2.3e-15 Score=159.87 Aligned_cols=308 Identities=13% Similarity=0.095 Sum_probs=200.3
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEecccc-ccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYV-ANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLT 137 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~-a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~ 137 (514)
.....+.++.+|+.+|+++..|.++||+ +|.+++.+++. +||.|+++++.|.|+.+++.++|+.++.+.+..
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~--~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~----- 266 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAP--AGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTR----- 266 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcC--CCCEEEeecccHHHHHHHHHHcCCeeEEecccc-----
Confidence 4567889999999999999999999976 48899988876 999999999999999999999999999775420
Q ss_pred HHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccC
Q psy16848 138 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVN 217 (514)
Q Consensus 138 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~ 217 (514)
+ ..|+.
T Consensus 267 ----------n----------------------------------------------~~Gi~------------------ 272 (713)
T PRK15399 267 ----------N----------------------------------------------ALGIL------------------ 272 (713)
T ss_pred ----------c----------------------------------------------ccCCc------------------
Confidence 0 00000
Q ss_pred CceeeecchHHHHhhCCCCEEEec--CCChhHHHHHHhhccC-CCceEEEEecCCCCCccccCHHHHHHHHHHcCCEE-E
Q psy16848 218 PEVAIHASMIQGIRNSSAPKIIYR--HNDVNHLTQVLENMDV-KIPKLVAFETVHSMTGAICPLKELCEVSHQHGALT-F 293 (514)
Q Consensus 218 ~~v~~~~~~~~~~~~~g~~~~~v~--~~d~~~l~~~l~~~~~-~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~l-i 293 (514)
-.++ .-+.+.+++.+++... +++++++++++ +..|.++++++|.++| |+.+ +
T Consensus 273 --------------------g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~il 328 (713)
T PRK15399 273 --------------------GGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIH 328 (713)
T ss_pred --------------------CCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEE
Confidence 0000 0133666777776543 34567888887 6779999999999999 6766 6
Q ss_pred Eecccc-ccccCCCCCCccccCCCccCceEE---EcCCcccccC--CCeEEEecHHHH-HHHHhhcCceEeccCCcHHHH
Q psy16848 294 VDEVHA-VGLYGEHGAGIGERDGQLHNMDII---SGTLGKAFGN--IGGYIVGTKNFI-DTIRSYAAGFIFTTSLPPTVL 366 (514)
Q Consensus 294 ~Dea~~-~g~~g~~~~~~~~~~~~~~~~di~---~~S~sK~lg~--~GG~l~~~~~~~-~~l~~~~~~~~~~~~~~~~~~ 366 (514)
+||||+ ...+.+...+...... ..++|.+ +-|.||.+++ .++++..+..+- +++..... +..+++++.+.+
T Consensus 329 vDEAhgah~~F~p~~~~~sam~~-~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~-m~~STSPsY~Lm 406 (713)
T PRK15399 329 FDSAWVPYTHFHPIYQGKSGMSG-ERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFM-MHTSTSPSYPIV 406 (713)
T ss_pred EeccchhhhhcCcccCCcChhhC-CCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHH-HHcCCCcHHHHH
Confidence 999998 1111111111111111 1145666 8899999976 236665433211 22222111 111456666777
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-C------CccccCC-----------------------------
Q psy16848 367 AGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-G------FPVEHTP----------------------------- 410 (514)
Q Consensus 367 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------~~~~~~~----------------------------- 410 (514)
+.+-.+...+......++.+...+....+++.+.+. + +.+..+.
T Consensus 407 ASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~l 486 (713)
T PRK15399 407 ASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFL 486 (713)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccC
Confidence 766666666643455667777777888888877665 2 2222110
Q ss_pred Cc-EEEEEeCC----------CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 411 SH-IIPIKIGN----------PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 411 ~~-~~~i~l~~----------~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
.+ -+.+..+. +.....+.+.| +++||.+. ..+...+-+.++...|++++++++++|.++-+
T Consensus 487 DP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L-~e~gI~~E-------~~d~~~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 487 DPVKVTILTPGMDEQGNMSEEGIPAALVAKFL-DERGIVVE-------KTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred CCceEEEEecCcccccccccCCCCHHHHHHHH-HHcCCEEE-------ecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 01 12233321 23455677777 59999986 23345677888888999999999999998755
Q ss_pred Hc
Q psy16848 480 SL 481 (514)
Q Consensus 480 ~~ 481 (514)
..
T Consensus 559 ~~ 560 (713)
T PRK15399 559 AY 560 (713)
T ss_pred hh
Confidence 43
No 353
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.72 E-value=3.1e-15 Score=158.89 Aligned_cols=306 Identities=13% Similarity=0.093 Sum_probs=198.9
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEecccc-ccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYV-ANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLT 137 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~-a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~ 137 (514)
.....+.++..|+.+|+++..|.++||+ +|.+++.+++. +||.|+++++.|.|+.+++.++|+.++.+.+..
T Consensus 194 ~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~--~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~r----- 266 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAP--AGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTR----- 266 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcC--CCCEEEeecccHHHHHHHHHHcCCeEEEecccc-----
Confidence 4667899999999999999999999976 58888888876 999999999999999999999999999775520
Q ss_pred HHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccC
Q psy16848 138 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVN 217 (514)
Q Consensus 138 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~ 217 (514)
+ ..|+.
T Consensus 267 ----------n----------------------------------------------~~Gi~------------------ 272 (714)
T PRK15400 267 ----------N----------------------------------------------AYGIL------------------ 272 (714)
T ss_pred ----------c----------------------------------------------ccCCc------------------
Confidence 0 00000
Q ss_pred CceeeecchHHHHhhCCCCEEEec--CCChhHHHHHHhhccC-CCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEE
Q psy16848 218 PEVAIHASMIQGIRNSSAPKIIYR--HNDVNHLTQVLENMDV-KIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFV 294 (514)
Q Consensus 218 ~~v~~~~~~~~~~~~~g~~~~~v~--~~d~~~l~~~l~~~~~-~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~ 294 (514)
-.++ .-+.+.+++.+++... +++..++++++ +..|.+++++.|.++|+.++ +++
T Consensus 273 --------------------g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilv 329 (714)
T PRK15400 273 --------------------GGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHF 329 (714)
T ss_pred --------------------cCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEE
Confidence 0001 1134666777766543 22336777777 67799999999999999887 689
Q ss_pred ecccc-ccccCCCCCCccccCCCccCc---e--EEEcCCcccccCC--CeEEEecHHH-HHHHHhhcCceEeccCCcHHH
Q psy16848 295 DEVHA-VGLYGEHGAGIGERDGQLHNM---D--IISGTLGKAFGNI--GGYIVGTKNF-IDTIRSYAAGFIFTTSLPPTV 365 (514)
Q Consensus 295 Dea~~-~g~~g~~~~~~~~~~~~~~~~---d--i~~~S~sK~lg~~--GG~l~~~~~~-~~~l~~~~~~~~~~~~~~~~~ 365 (514)
||||+ ...+.+..+ +...+..+. | +++-|.||.+++- ++++..+..+ .+++..... +..+++++.+.
T Consensus 330 DEAwgah~~F~p~~~---~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~-m~~STSPsY~l 405 (714)
T PRK15400 330 DSAWVPYTNFSPIYE---GKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYM-MHTTTSPHYGI 405 (714)
T ss_pred EccchhhhccCcccC---CcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHH-HHcCCCcHHHH
Confidence 99998 211211111 111111223 4 9999999999762 2443221111 112221111 11145666677
Q ss_pred HHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-C------CccccCC----------------------------
Q psy16848 366 LAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-G------FPVEHTP---------------------------- 410 (514)
Q Consensus 366 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------~~~~~~~---------------------------- 410 (514)
++.+-.+...+..+...+..+...++...+++.+.++ + +.+..+.
T Consensus 406 ~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~ 485 (714)
T PRK15400 406 VASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMY 485 (714)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccc
Confidence 7776666666644455677777888888888888765 3 3222111
Q ss_pred -Cc-EEEEEeCC----------CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 411 -SH-IIPIKIGN----------PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 411 -~~-~~~i~l~~----------~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
.+ -+.+..+. +.....+.+.| +++||.+. ..+...+-+.++...|++++++++++|.++-
T Consensus 486 lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L-~e~gI~~E-------~~d~~~iLfl~s~g~t~~~~~~L~~aL~~f~ 557 (714)
T PRK15400 486 LDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYL-DEHGIVVE-------KTGPYNLLFLFSIGIDKTKALSLLRALTDFK 557 (714)
T ss_pred cCCceEEEEeCCCCCCccccccCCCHHHHHHHH-HHcCCEEE-------ecCCCeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 01 12232222 22345666777 69999986 2345577788888899999999999999875
Q ss_pred HH
Q psy16848 479 KS 480 (514)
Q Consensus 479 ~~ 480 (514)
+.
T Consensus 558 ~~ 559 (714)
T PRK15400 558 RA 559 (714)
T ss_pred Hh
Confidence 54
No 354
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.72 E-value=2.8e-18 Score=166.56 Aligned_cols=261 Identities=22% Similarity=0.217 Sum_probs=166.1
Q ss_pred ecccCCCCCChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCC
Q psy16848 22 RLSSVQYKVPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPG 101 (514)
Q Consensus 22 d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~g 101 (514)
||.|.+ ++|++.+++.++.. +.. .||.++...++++++++++|.+.++|++|||.||..+++++.+ |+
T Consensus 1 Df~SD~--~~~~m~~a~~~a~~-------gd~-~Yg~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~--~~ 68 (290)
T PF01212_consen 1 DFRSDT--PTPAMLEAMAAANV-------GDD-AYGEDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLR--PG 68 (290)
T ss_dssp EES-SS--S-HHEEHHHHHTTS-------B-C-CTTSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHH--TT
T ss_pred CCCccC--CCHHHHHHHHcccc-------CCc-ccCCChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHh--cC
Confidence 555544 78999988854332 122 4678899999999999999999999999999999999999987 99
Q ss_pred ceEEecCccchhhhhhh---hcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCc
Q psy16848 102 LHYISDAGNHASMIQGI---RNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGA 178 (514)
Q Consensus 102 d~v~~~~~~h~~~~~~~---~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (514)
+.|++....|....+.- ...|.+++.++..+.
T Consensus 69 ~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~--------------------------------------------- 103 (290)
T PF01212_consen 69 ESVICADTAHIHFDETGAIEELSGAKLIPLPSDDD--------------------------------------------- 103 (290)
T ss_dssp EEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTG---------------------------------------------
T ss_pred CceeccccceeeeeccchhhHhcCcEEEECCCccc---------------------------------------------
Confidence 99999999998765431 224444443322110
Q ss_pred eEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccC-
Q psy16848 179 LTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDV- 257 (514)
Q Consensus 179 ~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~- 257 (514)
| .-+.+.+++.+.....
T Consensus 104 ------------------G--------------------------------------------~l~~~~l~~~~~~~~~h 121 (290)
T PF01212_consen 104 ------------------G--------------------------------------------KLTPEDLEAAIEEHGAH 121 (290)
T ss_dssp ------------------T--------------------------------------------BB-HHHHHHHHHHHTGT
T ss_pred ------------------C--------------------------------------------CCCHHHHHHHhhhcccc
Confidence 0 0145555565555433
Q ss_pred -CCceEEEEecCCCC-CccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc
Q psy16848 258 -KIPKLVAFETVHSM-TGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG 332 (514)
Q Consensus 258 -~~~~~vv~~~~~np-tG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg 332 (514)
.++++|.+++++|. .|.+++ +++|.++|++||+.|+.|.+..+......+..+.++ ...+|++..|++|.++
T Consensus 122 ~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~---~~~~D~v~~~~tK~~g 198 (290)
T PF01212_consen 122 HPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEI---AAGADSVSFGGTKNGG 198 (290)
T ss_dssp SGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHH---HTTSSEEEEETTSTT-
T ss_pred CCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHH---hhhCCEEEEEEEcccc
Confidence 56889999999987 477787 789999999999999999998633221111111222 2468999999999987
Q ss_pred CCC-eEEEecHHHHHHHHhhcCceEeccCCcHHHHH-HH--HHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCcc
Q psy16848 333 NIG-GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLA-GA--REAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPV 406 (514)
Q Consensus 333 ~~G-G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-a~--~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 406 (514)
.++ +++++++++++.........+..........+ .. ..++..+ +.+ .....+..++.+++.+.|+.++..+
T Consensus 199 ~~~Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~~l~~l-~~~-~~~~~~~~~~A~~La~~l~~~~~~~ 274 (290)
T PF01212_consen 199 APGGAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQFAALRAL-ELW-LERARHANAMAKRLAAGLEALGGVL 274 (290)
T ss_dssp SSSEEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHHHHHCHE-ECS-HHHHHCHHHHHHCHHHCHHEECEEE
T ss_pred cccceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhHHHHHHH-Hhh-HHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 744 88899999776554443332111111111111 00 1122211 122 3456667788889999998886544
No 355
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.71 E-value=5e-15 Score=154.99 Aligned_cols=225 Identities=16% Similarity=0.202 Sum_probs=141.1
Q ss_pred ChhHHHHHHhhccCCCce--EEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCccCc
Q psy16848 244 DVNHLTQVLENMDVKIPK--LVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLHNM 320 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~--~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~~ 320 (514)
|.+.+++.+++...++++ +|+....++.+|.+.|+++|.++|+++|+++++|.+|+.+.. ....+.. ..+ ...+
T Consensus 248 d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~--l~g-le~a 324 (522)
T TIGR03799 248 DVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHL--LKG-IERA 324 (522)
T ss_pred CHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHH--hcC-chhC
Confidence 556666666543323333 444456677999999999999999999999999999984432 1100000 122 2368
Q ss_pred eEEEcCCcccc-cCCC-eEEEec-HHHHHHHHhhcC-----------ceEeccCCcHHHHHHHHHHHHHhhhchHHHHHH
Q psy16848 321 DIISGTLGKAF-GNIG-GYIVGT-KNFIDTIRSYAA-----------GFIFTTSLPPTVLAGAREAIRILSSQEGVELRA 386 (514)
Q Consensus 321 di~~~S~sK~l-g~~G-G~l~~~-~~~~~~l~~~~~-----------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 386 (514)
|.++.|.||++ ++.| |+++.+ +...+.+..... .+.+..+-+.. ...+..+|+.+...+++++.+
T Consensus 325 DSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~-al~lw~aL~~lG~~G~~~ii~ 403 (522)
T TIGR03799 325 DSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGM-AMLVYAGLHIIGRKGYELLID 403 (522)
T ss_pred CEEEEChhhcCCcCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchH-HHHHHHHHHHHhHHHHHHHHH
Confidence 99999999966 5666 777654 555555443110 11122222322 234677888887788999999
Q ss_pred HHHHHHHHHHHHHHhC-CCccccC-CCcEEEEEeCCC----------------------ccHHHHHHHHHHhCCeE-Eec
Q psy16848 387 KHQDIVAYLRNELIQI-GFPVEHT-PSHIIPIKIGNP----------------------ALNTKICDMLLKEKGHY-VQP 441 (514)
Q Consensus 387 ~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~i~l~~~----------------------~~~~~~~~~Ll~~~GI~-v~~ 441 (514)
+..++++++.+.|++. ++.+..+ .-+++.+++... .....+.+++. +.|.. ++.
T Consensus 404 ~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~-~~G~~~vs~ 482 (522)
T TIGR03799 404 QSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQR-EAGKSFVSR 482 (522)
T ss_pred HHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHH-hcCCEEEEE
Confidence 9999999999999887 7877654 345666665321 01135666664 55544 442
Q ss_pred ccC-CCC--CCCCcEEEEEe-CCCCCHHHHHHHHHH
Q psy16848 442 INY-PTV--PVGEEKIRLAP-TPFHTREMIDKFVTD 473 (514)
Q Consensus 442 ~~~-~~~--~~~~~~iRl~~-~~~~t~e~id~~~~~ 473 (514)
... +.. ..+...+|+++ +..+|+++++.+++.
T Consensus 483 t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 483 TRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred EEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 221 000 11235799988 445677889887764
No 356
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.69 E-value=2.5e-14 Score=133.98 Aligned_cols=212 Identities=19% Similarity=0.211 Sum_probs=161.9
Q ss_pred HHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccc
Q psy16848 251 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKA 330 (514)
Q Consensus 251 ~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~ 330 (514)
.+.+..++.++++++++++..||...++.+|.++++++|++++.|=+|+.|.. +.+--..+.|+.++|.+|.
T Consensus 158 ~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGav--------p~~Lh~~gaDfaigcsyKY 229 (407)
T COG3844 158 ALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAV--------PVDLHAAGADFAIGCSYKY 229 (407)
T ss_pred HHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCc--------ceeecccCCCeeeeeecee
Confidence 45555567789999999999999999999999999999999999999998765 2222256899999999999
Q ss_pred ccC-CC--eEEEecHHHHHHHHhhcCc-eE-------------------e-ccCCcHHHHHHHHHHHHHhhhchHHHHHH
Q psy16848 331 FGN-IG--GYIVGTKNFIDTIRSYAAG-FI-------------------F-TTSLPPTVLAGAREAIRILSSQEGVELRA 386 (514)
Q Consensus 331 lg~-~G--G~l~~~~~~~~~l~~~~~~-~~-------------------~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 386 (514)
+++ +| +++...+...+...+...+ ++ | ..+.+-..+++...+|+.+.+-.+.++++
T Consensus 230 LNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~ 309 (407)
T COG3844 230 LNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRK 309 (407)
T ss_pred ccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHH
Confidence 943 45 6666655544433221111 10 1 12445677788888999988888999999
Q ss_pred HHHHHHHHHHHHHHhC----CCccccC-----CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEE
Q psy16848 387 KHQDIVAYLRNELIQI----GFPVEHT-----PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLA 457 (514)
Q Consensus 387 ~~~~~~~~l~~~L~~~----g~~~~~~-----~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~ 457 (514)
+...+.+++.+.++.. ++.+..| .|..+.+..+. ..++.+.|. ++||... -+.++.+|+.
T Consensus 310 kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~---~~~V~qaLi-~rGVigD-------~R~P~vlRfg 378 (407)
T COG3844 310 KSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH---GYQVMQALI-DRGVIGD-------FREPDVLRFG 378 (407)
T ss_pred hhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc---HHHHHHHHH-HcCcccc-------ccCCCeeeec
Confidence 9999999999998876 4444444 35577777764 678899996 9999964 2336799999
Q ss_pred eC-CCCCHHHHHHHHHHHHHHHHHc
Q psy16848 458 PT-PFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 458 ~~-~~~t~e~id~~~~~l~~~l~~~ 481 (514)
|+ .+++-+|+=..++.|.+++++.
T Consensus 379 ftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 379 FTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred CccceechhHHHHHHHHHHHHHHhh
Confidence 85 5778899999999999999875
No 357
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.68 E-value=1.4e-14 Score=160.59 Aligned_cols=326 Identities=14% Similarity=0.145 Sum_probs=207.8
Q ss_pred hhhhhcCCceeeecccCCCCC--Chh-HHHHHHHHHHHhCCCCCC--cCcccCcchHHHHHHHHHHhHcCCCc--EEEEe
Q psy16848 10 FKQVHKSNRVTCRLSSVQYKV--PKG-GRKCLGEALEKFGTGAGG--TRNISGNSLFHEKLEEDVAKLHQKEA--GLVFT 82 (514)
Q Consensus 10 ~~~~~~~g~~~~d~~~~~~~~--~~~-~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~la~~~~~~~--~i~~~ 82 (514)
++.+.+++..+..|-+..|.+ .|. |++.+.+--. |-+.++- +..+.|.-+...+++..+++++|.+. +-+..
T Consensus 67 ~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~~-~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d 145 (954)
T PRK05367 67 LRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENPA-WYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLD 145 (954)
T ss_pred HHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCcc-hhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccc
Confidence 444444544444444444444 465 4354444211 1122221 11244666777889999999999874 36667
Q ss_pred ccccccccchhhccccCC--CceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeecccccc
Q psy16848 83 SCYVANDSTLFTLGKMIP--GLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMT 160 (514)
Q Consensus 83 sGt~a~~~~l~~l~~~~~--gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 160 (514)
++|.+...++.++. ..+ +++|++++..|++....++.
T Consensus 146 ~aTAa~ea~~~a~~-~~~~~~~~vlv~~~~hP~~~~v~~t---------------------------------------- 184 (954)
T PRK05367 146 EATAAAEAMALAKR-VSKSKSNRFFVDDDVHPQTLDVLRT---------------------------------------- 184 (954)
T ss_pred cHHHHHHHHHHhhh-hccCCCCEEEEcCccCHHHHHHHHH----------------------------------------
Confidence 77777666665553 224 59999999999998754321
Q ss_pred CCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEe
Q psy16848 161 GAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIY 240 (514)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v 240 (514)
.....|.+++.+
T Consensus 185 --------------------------------------------------------------------~a~~~G~ev~~~ 196 (954)
T PRK05367 185 --------------------------------------------------------------------RAEPLGIEVVVG 196 (954)
T ss_pred --------------------------------------------------------------------HHHhCCCEEEEe
Confidence 112234444444
Q ss_pred cCCC-hhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCcc
Q psy16848 241 RHND-VNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLH 318 (514)
Q Consensus 241 ~~~d-~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~ 318 (514)
+..+ .+ .+++..+++.. .|.+|.+.|+++|.++|+++|+++++|..+. .+.. ...+ ..
T Consensus 197 ~~~~d~~----------~~~~~~vlvq~-p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l--------~~pg-e~ 256 (954)
T PRK05367 197 DAAKALD----------HDDVFGVLLQY-PGTSGEVRDYTALIAAAHARGALVAVAADLLALTLL--------TPPG-EM 256 (954)
T ss_pred cCccCCC----------cccEEEEEEec-CCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCC--------CChh-hc
Confidence 4221 11 12344555555 5789999999999999999999999998664 2222 1111 45
Q ss_pred CceEEEcCCccc-----ccCCC-eEEEecHHHHHHHHhhcCceE---------------------ec---cCCc-HHHHH
Q psy16848 319 NMDIISGTLGKA-----FGNIG-GYIVGTKNFIDTIRSYAAGFI---------------------FT---TSLP-PTVLA 367 (514)
Q Consensus 319 ~~di~~~S~sK~-----lg~~G-G~l~~~~~~~~~l~~~~~~~~---------------------~~---~~~~-~~~~~ 367 (514)
++|++++|.+|+ +|++| |++++++++.+.+....-+++ +. .+.. ...+.
T Consensus 257 GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~ 336 (954)
T PRK05367 257 GADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLL 336 (954)
T ss_pred CCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHH
Confidence 899999999998 55556 999999988877753222211 00 0111 11122
Q ss_pred HHHHH--HHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccC-CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccC
Q psy16848 368 GAREA--IRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHT-PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINY 444 (514)
Q Consensus 368 a~~~~--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~ 444 (514)
++.+. +.++...+++++.++...+..++.+.|++.|+++... ....+.+.++ .+..++.++|. ++||.++.
T Consensus 337 a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~f~~~~~~~~--~~~~~i~~~l~-~~gi~~~~--- 410 (954)
T PRK05367 337 AVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSFFDTLTVEVG--GDAAAVLARAL-AAGINLRR--- 410 (954)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCCeEEEeCC--CCHHHHHHHHH-HCCceecc---
Confidence 22222 2445567888999999999999999998888776533 2234556654 35789999995 99999842
Q ss_pred CCCCCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q psy16848 445 PTVPVGEEKIRLAPTPFHTREMIDKFVTDLL 475 (514)
Q Consensus 445 ~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~ 475 (514)
...+.+|++++..+|++|++++++.|.
T Consensus 411 ----~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 411 ----VDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred ----ccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 124579999999999999999999997
No 358
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.66 E-value=3.8e-14 Score=156.36 Aligned_cols=330 Identities=12% Similarity=0.096 Sum_probs=210.4
Q ss_pred hhhhhcCCceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCCcC--cccCcchHHHHHHHHHHhHcCCCc--EEEEe
Q psy16848 10 FKQVHKSNRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGGTR--NISGNSLFHEKLEEDVAKLHQKEA--GLVFT 82 (514)
Q Consensus 10 ~~~~~~~g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~~~~--~i~~~ 82 (514)
++.+...+..+.+|.+..|.+ ++.+.+++.+..+-| +.++.+. ...|..+...+++..+++++|.+- +-++.
T Consensus 94 ~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~-TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d 172 (993)
T PLN02414 94 MKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGWY-TQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLD 172 (993)
T ss_pred HHHHHhcCCccccccCCCCCCccCCHHHHHHHHhChHHH-hhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecC
Confidence 444444555677787766654 345557777666532 2233222 124556677889999999999863 56677
Q ss_pred ccccccccchhhcc-ccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccC
Q psy16848 83 SCYVANDSTLFTLG-KMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTG 161 (514)
Q Consensus 83 sGt~a~~~~l~~l~-~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 161 (514)
++|.+..+++.+.. ..+++|+|++++..|++.+..++..
T Consensus 173 ~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~---------------------------------------- 212 (993)
T PLN02414 173 EGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTR---------------------------------------- 212 (993)
T ss_pred ChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHh----------------------------------------
Confidence 77777666665553 2224588999999999987554211
Q ss_pred CccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec
Q psy16848 162 AICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR 241 (514)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~ 241 (514)
....|.+++.++
T Consensus 213 --------------------------------------------------------------------a~~~GieV~~v~ 224 (993)
T PLN02414 213 --------------------------------------------------------------------ADGLGLEVVVAD 224 (993)
T ss_pred --------------------------------------------------------------------hhhcCCEEEEec
Confidence 112233333333
Q ss_pred CCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCce
Q psy16848 242 HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMD 321 (514)
Q Consensus 242 ~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~d 321 (514)
..+.+ ...+.+..++ .+..|.+|.+.|+++|.++|+++|+++++ .++.++... +.+.. ..++|
T Consensus 225 ~~~~~--------~~~~~v~~vl-vq~P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~-----l~~pg--e~GAD 287 (993)
T PLN02414 225 EKDFD--------YSSGDVCGVL-VQYPATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTM-----LKPPG--EWGAD 287 (993)
T ss_pred chhhc--------cccCceEEEE-EecCCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcC-----CCCHh--hccCc
Confidence 21111 0011233343 34446789999999999999999999999 777754431 11111 45899
Q ss_pred EEEcCCcccccCCC------eEEEecHHHHHHHHhhcCceE---------------------ec-cCCcHH---HHHHHH
Q psy16848 322 IISGTLGKAFGNIG------GYIVGTKNFIDTIRSYAAGFI---------------------FT-TSLPPT---VLAGAR 370 (514)
Q Consensus 322 i~~~S~sK~lg~~G------G~l~~~~~~~~~l~~~~~~~~---------------------~~-~~~~~~---~~~a~~ 370 (514)
+++++.+|+.++.| |++++++++...+....-+++ +. .+.+.- .+.++.
T Consensus 288 i~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~l 367 (993)
T PLN02414 288 IVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANM 367 (993)
T ss_pred EEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHH
Confidence 99999999984422 999999988664431111110 00 112221 222222
Q ss_pred HH--HHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccC-CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCC
Q psy16848 371 EA--IRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHT-PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTV 447 (514)
Q Consensus 371 ~~--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~ 447 (514)
++ +.++...+++++.+++..+..++.+.|.+.|+++..+ ....+.+.++ +..++.++|. ++||.++...
T Consensus 368 a~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~~vt~~~~---~~~~v~~~L~-~~gI~l~~~~---- 439 (993)
T PLN02414 368 AAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFDTVKVKCS---DADAIADAAA-KVGINLRVVD---- 439 (993)
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcCeEEEecC---CHHHHHHHHH-HCCCeeEEec----
Confidence 22 2233456788899999999999999998888776443 2235666664 3578999995 9999876321
Q ss_pred CCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Q psy16848 448 PVGEEKIRLAPTPFHTREMIDKFVTDLLA 476 (514)
Q Consensus 448 ~~~~~~iRl~~~~~~t~e~id~~~~~l~~ 476 (514)
.+.+|+|++..+|++|||+++++|..
T Consensus 440 ---~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 440 ---ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred ---CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 34799999999999999999999963
No 359
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.66 E-value=1.4e-14 Score=139.37 Aligned_cols=329 Identities=16% Similarity=0.135 Sum_probs=209.2
Q ss_pred eeeecccCCCCC---ChhHHHHHHHHHHHhCCCC--CCcCcccCcchHHHHHHHHHHhH-cCCC-------c--EEEEec
Q psy16848 19 VTCRLSSVQYKV---PKGGRKCLGEALEKFGTGA--GGTRNISGNSLFHEKLEEDVAKL-HQKE-------A--GLVFTS 83 (514)
Q Consensus 19 ~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~la~~-~~~~-------~--~i~~~s 83 (514)
.-+|+.=..|.+ ...+.+++.++-...-... ..+....| ...+.+.++++ ||.+ + .+-+.+
T Consensus 27 ~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G----~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~G 102 (396)
T COG1448 27 NKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEG----LPEFLEAVQKLLFGADSPALAEDRVATVQTLG 102 (396)
T ss_pred CeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCC----cHHHHHHHHHHhcCCCcHHHHhhhHhheecCC
Confidence 456775555553 3445555555444322221 12222333 34555566665 4533 1 355688
Q ss_pred cccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCc
Q psy16848 84 CYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAI 163 (514)
Q Consensus 84 Gt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 163 (514)
||-|+..+..-+.+..|...|+++++++..-..-++..|.++..|+.-|.+.
T Consensus 103 GTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~---------------------------- 154 (396)
T COG1448 103 GTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAET---------------------------- 154 (396)
T ss_pred cchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeecccccc----------------------------
Confidence 9998887777776666888899999999887777777788777766532110
Q ss_pred cchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCC
Q psy16848 164 CPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHN 243 (514)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~ 243 (514)
. ..
T Consensus 155 --------------------------------~---------------------------------------------~~ 157 (396)
T COG1448 155 --------------------------------K---------------------------------------------GL 157 (396)
T ss_pred --------------------------------c---------------------------------------------cc
Confidence 0 12
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEecccc-ccccC--CCCCCccccCCCc
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHA-VGLYG--EHGAGIGERDGQL 317 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~-~g~~g--~~~~~~~~~~~~~ 317 (514)
|++.+...|++... +..+++-..+|||||.-++ |++|.++.++.+.+.++|-+|. ++. | ....++- .....
T Consensus 158 df~~mla~L~~a~~-~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~-GleeDa~~lR-~~a~~ 234 (396)
T COG1448 158 DFDGMLADLKTAPE-GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFAD-GLEEDAYALR-LFAEV 234 (396)
T ss_pred cHHHHHHHHHhCCC-CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc-chHHHHHHHH-HHHHh
Confidence 67777777776643 3456667889999999998 8999999999999999999998 322 1 1110110 01001
Q ss_pred cCceEEEcCCcccccCCC---eEE---EecHHHHHHHH----hhcCceEeccCCcHHHHHHHHHHH-----HHhhhchHH
Q psy16848 318 HNMDIISGTLGKAFGNIG---GYI---VGTKNFIDTIR----SYAAGFIFTTSLPPTVLAGAREAI-----RILSSQEGV 382 (514)
Q Consensus 318 ~~~di~~~S~sK~lg~~G---G~l---~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~a~~~~l-----~~~~~~~~~ 382 (514)
....+|+.||||.+|..| |.+ ..+.+.+..+. ...+. .|+ ++|...+......| +.....++.
T Consensus 235 ~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~-~yS-nPP~~Ga~vva~IL~~p~Lra~W~~El~ 312 (396)
T COG1448 235 GPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRT-NYS-NPPAHGAAVVATILNNPELRAEWEQELE 312 (396)
T ss_pred CCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHh-ccC-CCchhhHHHHHHHhCCHHHHHHHHHHHH
Confidence 233799999999999866 433 23344444332 22211 112 22333333333333 322345678
Q ss_pred HHHHHHHHHHHHHHHHHHhC----CCccccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEe
Q psy16848 383 ELRAKHQDIVAYLRNELIQI----GFPVEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAP 458 (514)
Q Consensus 383 ~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~ 458 (514)
.+++++.+++..+.+.|++. .+.++..+.+||.+. + . +.+-+.+|.++.||++.. .=|+++
T Consensus 313 ~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~-G--l-s~~QV~rLree~~IY~v~-----------sGRi~v 377 (396)
T COG1448 313 EMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYT-G--L-SPEQVDRLREEFGIYLVA-----------SGRINV 377 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecC-C--C-CHHHHHHHHHhccEEEec-----------CCeeee
Confidence 89999999999999999985 466777777787764 2 2 345567787899999862 118999
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q psy16848 459 TPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 459 ~~~~t~e~id~~~~~l~~~ 477 (514)
. ..++..++.+++++.++
T Consensus 378 a-Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 378 A-GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred c-cCChhhHHHHHHHHHhh
Confidence 7 68899999999998875
No 360
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.65 E-value=2e-15 Score=135.64 Aligned_cols=165 Identities=24% Similarity=0.275 Sum_probs=121.9
Q ss_pred HHHHHHHHHhHc--CCCcEEEEeccccccccchhhccccCCCceEEecCccchhhh-hhhhcCCCCeeeccCCChHHHHH
Q psy16848 62 HEKLEEDVAKLH--QKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMI-QGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 62 ~~~~~~~la~~~--~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~-~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
++++++++++++ +.+.++++++||+|+..++.++.. +++.|+++.+.|.+.. ..++..|.++..++.++...
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--- 76 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLG--PGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGY--- 76 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCC--CCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCc---
Confidence 468899999999 888889999999999999999865 7999999999998887 56666666655443321000
Q ss_pred HHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCC
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNP 218 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~ 218 (514)
T Consensus 77 -------------------------------------------------------------------------------- 76 (170)
T cd01494 77 -------------------------------------------------------------------------------- 76 (170)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccc
Q psy16848 219 EVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVH 298 (514)
Q Consensus 219 ~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~ 298 (514)
.....+...+....++++++++++++|++|...|+++|.++|+++|+++|+|++|
T Consensus 77 -------------------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~ 131 (170)
T cd01494 77 -------------------------GGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAAS 131 (170)
T ss_pred -------------------------cchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccc
Confidence 0000001111223467899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCccCceEEEcCCcccccCCC-eEEEec
Q psy16848 299 AVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG-GYIVGT 341 (514)
Q Consensus 299 ~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G-G~l~~~ 341 (514)
..+...... ......++|+++.|++|++++.| |+++++
T Consensus 132 ~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 132 AGGASPAPG-----VLIPEGGADVVTFSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred ccccccccc-----cccccccCCEEEEEcccccCCCceEEEEeC
Confidence 965543211 11113468999999999998766 888753
No 361
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.64 E-value=5e-14 Score=140.48 Aligned_cols=375 Identities=14% Similarity=0.060 Sum_probs=226.7
Q ss_pred CCceeeecccCCCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCCcEEEEeccccccccchh
Q psy16848 16 SNRVTCRLSSVQYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLF 93 (514)
Q Consensus 16 ~g~~~~d~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~ 93 (514)
....+||+-|.+.- ..++..+++.. |-. .|+-++-..+|++.+++++|.++++++++|+.++.++..
T Consensus 39 s~dV~IDLrSDTgT~apS~~m~aAM~~-----GDD------~Y~gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~ 107 (467)
T TIGR02617 39 SEDVFIDLLTDSGTGAVTQSMQAAMMR-----GDE------AYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIP 107 (467)
T ss_pred CCCeEEECccCCCCCCCCHHHHHHHHc-----CCc------ccccCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHH
Confidence 34568999766654 34566666654 211 123345568999999999999999999999999988888
Q ss_pred hccccCCCceEEecCc----cchhhh----hhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccc
Q psy16848 94 TLGKMIPGLHYISDAG----NHASMI----QGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP 165 (514)
Q Consensus 94 ~l~~~~~gd~v~~~~~----~h~~~~----~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (514)
.+++ .|||.+.++.. .|.... ..+.+.|+.++..... +.++.
T Consensus 108 ~~~~-~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~--ea~~~--------------------------- 157 (467)
T TIGR02617 108 VLIK-KREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTK--EAFDT--------------------------- 157 (467)
T ss_pred hhcc-cccccccccccccccceEEEEecchHHHHHcCceeecccch--hhccc---------------------------
Confidence 8764 26777765443 222211 1233344433321110 00000
Q ss_pred hhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCCh
Q psy16848 166 LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDV 245 (514)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~ 245 (514)
.+..+ -.| .-|.
T Consensus 158 -----------------------~~~~~-fkG--------------------------------------------~~dl 169 (467)
T TIGR02617 158 -----------------------GVRYD-FKG--------------------------------------------NFDL 169 (467)
T ss_pred -----------------------ccCCC-CCC--------------------------------------------CcCH
Confidence 00000 000 2278
Q ss_pred hHHHHHHhhccCCCceEEEEecCCC-CCccccC---HHHHHHHHHHcCCEEEEecccccc-cc-------CCCCCCcccc
Q psy16848 246 NHLTQVLENMDVKIPKLVAFETVHS-MTGAICP---LKELCEVSHQHGALTFVDEVHAVG-LY-------GEHGAGIGER 313 (514)
Q Consensus 246 ~~l~~~l~~~~~~~~~~vv~~~~~n-ptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g-~~-------g~~~~~~~~~ 313 (514)
+.+++.+++...++...+.+.-.+| -.|.++| ++++.++|++||+.++.|.+..+. .. +..+.++.++
T Consensus 170 ~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI 249 (467)
T TIGR02617 170 EGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQI 249 (467)
T ss_pred HHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHH
Confidence 8888999875434444443333334 3677888 799999999999999999998752 21 2222222222
Q ss_pred C-CCccCceEEEcCCcccccCC-CeEEEecHH----HHHHHHhhcC---ceEeccCCcHHHHHHHHHHHHHhhhchHHHH
Q psy16848 314 D-GQLHNMDIISGTLGKAFGNI-GGYIVGTKN----FIDTIRSYAA---GFIFTTSLPPTVLAGAREAIRILSSQEGVEL 384 (514)
Q Consensus 314 ~-~~~~~~di~~~S~sK~lg~~-GG~l~~~~~----~~~~l~~~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 384 (514)
. .....+|.++.|++|.++.+ ||+++++++ +.+.++.... ++..-.+++.-.+.++...|+...++ ..
T Consensus 250 ~rE~~~~aDsvt~slsKglgApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~---~y 326 (467)
T TIGR02617 250 TRETYKYADMLAMSAKKDAMVPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNL---DW 326 (467)
T ss_pred HHHhhccCCEEEEEcCCCCCCcccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccH---HH
Confidence 1 01136899999999999874 788888754 3344333221 22111156777777766666644322 35
Q ss_pred HHHHHHHHHHHHHHHHhCCCccccCCCcEEEEE-------eC-CCccHHHHHHHHHHhCCeEEec-ccC-----CCCCC-
Q psy16848 385 RAKHQDIVAYLRNELIQIGFPVEHTPSHIIPIK-------IG-NPALNTKICDMLLKEKGHYVQP-INY-----PTVPV- 449 (514)
Q Consensus 385 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~i~-------l~-~~~~~~~~~~~Ll~~~GI~v~~-~~~-----~~~~~- 449 (514)
.+.-....++|.+.|.+.|++++...|+-+.+. +| .......++..|+.+.||...- |+. +....
T Consensus 327 l~~ri~qv~yl~~~L~~~Gvpi~~~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~ 406 (467)
T TIGR02617 327 LAYRINQVQYLVNGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQ 406 (467)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEecCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCcc
Confidence 555566677999999999999877444422221 22 2234678888888888988642 111 11111
Q ss_pred ---CCcEEEEEeCC-CCCHHHHHHHHHHHHHHHHHcCCccCCcchhhHhHHHHHHHH
Q psy16848 450 ---GEEKIRLAPTP-FHTREMIDKFVTDLLAVWKSLDLPLSGLTCAQVNILLFIILF 502 (514)
Q Consensus 450 ---~~~~iRl~~~~-~~t~e~id~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 502 (514)
.-..+|++++. ..|.+.+|..++++..+.++-....+..--.+++++++|.+.
T Consensus 407 ~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~~~i~g~~~~~ep~~lrhF~~~ 463 (467)
T TIGR02617 407 LPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAPNIKGLTFTYEPKVLRHFTAR 463 (467)
T ss_pred CCCccceeeeccccccccHhHHHHHHHHHHHHHhhhhhcCCeEEEecCchheeeeec
Confidence 12689998874 568899999999999999876543333344678888876554
No 362
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.64 E-value=3.5e-14 Score=146.04 Aligned_cols=293 Identities=18% Similarity=0.197 Sum_probs=190.7
Q ss_pred ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCCC---cEEEEeccccccccchhhccccC---C----
Q psy16848 31 PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQKE---AGLVFTSCYVANDSTLFTLGKMI---P---- 100 (514)
Q Consensus 31 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~---~~i~~~sGt~a~~~~l~~l~~~~---~---- 100 (514)
++...+++...+.+ +......+-+...+.+++-..++++++.+ ...|+++||+||+.++.+..... .
T Consensus 75 ~~~a~~~~~~~~~~---nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~ 151 (460)
T COG0076 75 PPVAAELLVSALNK---NLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAES 151 (460)
T ss_pred HHHHHHHHHHHHhh---cCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcc
Confidence 34556666666554 22222222245677778888888888873 25888999999998887754300 0
Q ss_pred -----CceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhh
Q psy16848 101 -----GLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQ 175 (514)
Q Consensus 101 -----gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (514)
...|+++...|.+...+++..|.....++.... .|
T Consensus 152 ~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~----------------------~~------------------ 191 (460)
T COG0076 152 GKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT----------------------DY------------------ 191 (460)
T ss_pred cccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC----------------------cc------------------
Confidence 126899999999999888888776554322100 00
Q ss_pred cCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhc
Q psy16848 176 HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENM 255 (514)
Q Consensus 176 ~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~ 255 (514)
.-|.+.+++.+++.
T Consensus 192 ------------------------------------------------------------------~id~~~l~~~i~~~ 205 (460)
T COG0076 192 ------------------------------------------------------------------RIDVDALEEAIDEN 205 (460)
T ss_pred ------------------------------------------------------------------ccCHHHHHHHHHhh
Confidence 01445555555544
Q ss_pred cCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecccccccc---CCCCCCccc-cCCCccCceEEEcCCcccc
Q psy16848 256 DVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY---GEHGAGIGE-RDGQLHNMDIISGTLGKAF 331 (514)
Q Consensus 256 ~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~---g~~~~~~~~-~~~~~~~~di~~~S~sK~l 331 (514)
.... +|+....+.++|.+-|+++|.++|+++++++++|.|++.... ...+ . .++ ...+|.++.++||++
T Consensus 206 t~~g--~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~----~~~f~-l~~vdSIt~d~HK~g 278 (460)
T COG0076 206 TIGG--VVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDG----RWDFG-LEGVDSITVDGHKYG 278 (460)
T ss_pred ccCc--eEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccc----hhhcC-CCCceEEEECccccc
Confidence 2221 477888889999999999999999999999999999992221 1122 1 122 357899999999987
Q ss_pred -cCCC-eEEEe-cHH-HHHHHHhhcCc---------eEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q psy16848 332 -GNIG-GYIVG-TKN-FIDTIRSYAAG---------FIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNE 398 (514)
Q Consensus 332 -g~~G-G~l~~-~~~-~~~~l~~~~~~---------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 398 (514)
.+.| |+++. +++ +.+.+. +... +....+.+.....+....+..+..+++.++.++..+..+++.+.
T Consensus 279 ~aP~~~G~il~rd~e~l~~~~~-~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~ 357 (460)
T COG0076 279 LAPIGCGVVLFRDEEALRRILI-FADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEE 357 (460)
T ss_pred CCCCCceEEEEECHHHhhhhhh-cccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHH
Confidence 4445 66655 453 444333 2111 11112334446677777787776788899999999999999999
Q ss_pred HHhCC-Ccccc-CCCcEEEEEeCCCcc-HHHHHHHHHHhCCeEEec
Q psy16848 399 LIQIG-FPVEH-TPSHIIPIKIGNPAL-NTKICDMLLKEKGHYVQP 441 (514)
Q Consensus 399 L~~~g-~~~~~-~~~~~~~i~l~~~~~-~~~~~~~Ll~~~GI~v~~ 441 (514)
|++.+ +.+.. +..+.+.+++++..+ ..+..+.+ ++.|..+..
T Consensus 358 l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~~-~~~gw~v~~ 402 (460)
T COG0076 358 LEKLGDFELVNEPELPIVAFRLKDDEDTLADLSERL-DRRGWQVPA 402 (460)
T ss_pred HHhCCCcEeecCCccceEEEEcCCcccchhchHHHH-HhcCceeec
Confidence 99995 77765 566788888865333 33444555 367777753
No 363
>PLN02452 phosphoserine transaminase
Probab=99.61 E-value=5.5e-13 Score=134.07 Aligned_cols=201 Identities=13% Similarity=0.079 Sum_probs=151.4
Q ss_pred CCceEEEEecCCCCCccc-cCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-
Q psy16848 258 KIPKLVAFETVHSMTGAI-CPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG- 335 (514)
Q Consensus 258 ~~~~~vv~~~~~nptG~~-~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G- 335 (514)
++.+.+.+++..+.+|.. .+++++. ++++|+|.+.+++.. +.+...++.|+ .|.+|.+|++|
T Consensus 144 ~~~~~v~~~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~--------pidv~~~~v~~--~saqK~lGP~Gl 207 (365)
T PLN02452 144 PDAKFVHICANETIHGVEFKDYPDVG------NVPLVADMSSNFLSK--------PVDVSKYGVIY--AGAQKNVGPSGV 207 (365)
T ss_pred CCCcEEEECCCCCCCcEecCcccccC------CCeEEEECCccccCc--------ccCHHHcCEEE--EecccccCCCCe
Confidence 357889999999999995 6677664 389999999997764 22221234444 59999999999
Q ss_pred eEEEecHHHHHHHHhhcCce-Ee---------ccCCcHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhC-C
Q psy16848 336 GYIVGTKNFIDTIRSYAAGF-IF---------TTSLPPTVLAGAREAIRILSSQ-EGVELRAKHQDIVAYLRNELIQI-G 403 (514)
Q Consensus 336 G~l~~~~~~~~~l~~~~~~~-~~---------~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g 403 (514)
|+++.++++++++......+ .+ -.+++...+.++..+|+.+.++ +++.+.++.+++.+++.+.|++. |
T Consensus 208 ~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G 287 (365)
T PLN02452 208 TIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNG 287 (365)
T ss_pred EEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999987765432211 00 1255677889999999988776 79999999999999999999986 6
Q ss_pred C-cc-ccC--CCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Q psy16848 404 F-PV-EHT--PSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVW 478 (514)
Q Consensus 404 ~-~~-~~~--~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l 478 (514)
+ .. ..+ ++. .+.+.+++.....+|.+.+ +++|+...+|+... +.+|+++--.++.++++.+++.|+++-
T Consensus 288 ~y~~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~-~~~g~~~~~G~r~~-----gg~R~s~yna~~~~~v~~L~~~m~~f~ 361 (365)
T PLN02452 288 FYVCPVEKSVRSLMNVPFTLGGSELEAEFVKEA-AKAGMVQLKGHRSV-----GGMRASIYNAMPLAGVEKLVAFMKDFQ 361 (365)
T ss_pred cccCCCChHHhCCeEEEEEcCCchhHHHHHHHH-HHCCCcccCCcccc-----CceEEECcCCCCHHHHHHHHHHHHHHH
Confidence 6 11 111 233 5667777655677899999 69999998877522 239999988999999999999999986
Q ss_pred HH
Q psy16848 479 KS 480 (514)
Q Consensus 479 ~~ 480 (514)
++
T Consensus 362 ~~ 363 (365)
T PLN02452 362 AK 363 (365)
T ss_pred Hh
Confidence 64
No 364
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.58 E-value=6.3e-13 Score=133.64 Aligned_cols=202 Identities=16% Similarity=0.147 Sum_probs=145.2
Q ss_pred EEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC-CC-eEEEe
Q psy16848 263 VAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN-IG-GYIVG 340 (514)
Q Consensus 263 vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~-~G-G~l~~ 340 (514)
+++++.-+.||...|++++.+.+ +++++|+|.+-++|.. +..- + +.|+++.|..|.+++ +| ++++.
T Consensus 131 v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~--------~l~~-d-~iDv~~tgsQK~L~~ppGls~v~v 198 (374)
T TIGR01365 131 VVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQ--------DLDY-H-KLDVVTFSWQKVLGGEGAHGMLIL 198 (374)
T ss_pred EEEecCCCchheecccccccccc--CCCcEEEEccchhcCC--------CCCh-h-HCcEEEEechhccCCCCceEEEEE
Confidence 66888888999999987665332 5899999999997764 2221 2 489999999999976 45 78889
Q ss_pred cHHHHHHHHhhcC-----c-e-------------Eecc--CCcHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHH
Q psy16848 341 TKNFIDTIRSYAA-----G-F-------------IFTT--SLPPTVLAGAREAIRILSSQ-EGVELRAKHQDIVAYLRNE 398 (514)
Q Consensus 341 ~~~~~~~l~~~~~-----~-~-------------~~~~--~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~ 398 (514)
+++.+++.+.... . + ...+ +.+...+.++..+++.+.++ +++++.++++++++.+++.
T Consensus 199 s~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~ 278 (374)
T TIGR01365 199 SPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAF 278 (374)
T ss_pred CHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHH
Confidence 9888877653211 0 0 0011 23334556667777766565 7999999999999999999
Q ss_pred HHhCC-CccccC----CCc-EEEEEeCCC-c-----c-----HHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCC
Q psy16848 399 LIQIG-FPVEHT----PSH-IIPIKIGNP-A-----L-----NTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPF 461 (514)
Q Consensus 399 L~~~g-~~~~~~----~~~-~~~i~l~~~-~-----~-----~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~ 461 (514)
++++| +.+... .++ +..+.++++ . + ..++.+.| +++||.+.++.... .++.+|+..-..
T Consensus 279 l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~i~~G~~~~---~~~~fRIg~~G~ 354 (374)
T TIGR01365 279 VAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTL-EKEGVAYDIGSYRD---APSGLRIWCGAT 354 (374)
T ss_pred HHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHH-HHCCEEEecccccc---CCCceEEecCCc
Confidence 99998 655432 344 344566443 2 2 56788888 58899998776532 247899999889
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy16848 462 HTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 462 ~t~e~id~~~~~l~~~l~~ 480 (514)
++.+|++.+++.|+-+.+.
T Consensus 355 i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 355 VEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 9999999999999876653
No 365
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.54 E-value=2.2e-12 Score=132.04 Aligned_cols=295 Identities=16% Similarity=0.148 Sum_probs=181.1
Q ss_pred chHHHHHHHHHHhHcCCCcEEEEeccccc-cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLVFTSCYVA-NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLT 137 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~~~sGt~a-~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~ 137 (514)
.....+.++..|+.+|+++..|..+||++ |..++.+++. +||.|+++++.|.|+.+++-.+|+.++.+...
T Consensus 69 ~G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~--~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~------ 140 (557)
T COG1982 69 EGPIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLT--PGDKVLVDRNCHKSIHHGLILAGATPVYLEPS------ 140 (557)
T ss_pred CccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcC--CCCEEEecCCccHHHHHHHHHcCCceEEecCC------
Confidence 35678999999999999999999888875 8888888876 99999999999999999999999998876441
Q ss_pred HHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccC
Q psy16848 138 QVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVN 217 (514)
Q Consensus 138 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~ 217 (514)
..|.+-++ .
T Consensus 141 --------~np~~gi~------------------------------------------g--------------------- 149 (557)
T COG1982 141 --------RNPLYGII------------------------------------------G--------------------- 149 (557)
T ss_pred --------CCcccccc------------------------------------------C---------------------
Confidence 00100000 0
Q ss_pred CceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecc
Q psy16848 218 PEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEV 297 (514)
Q Consensus 218 ~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea 297 (514)
.-+.+.+.+.+.+..... |++++.++ +..|.+.++++|++.++.+++++.+|++
T Consensus 150 ------------------------gI~~~~~~~~l~~~~~~~-k~~vitnp-TYdGv~~n~~~i~~~~~~~~a~v~~dea 203 (557)
T COG1982 150 ------------------------GIPLETFKEALLAHPDAE-KLAVITNP-TYDGVCYNLRKIVELLHHYGAWVLYDEA 203 (557)
T ss_pred ------------------------CCCHHHHHHHHHhChhhh-eeEEEecC-ccceEeecHHHHHHHHhhcCceEEhhhc
Confidence 114566666666543221 67777776 4669999999999999999999999999
Q ss_pred ccccccCCCCCCccccCCCccCceEEEcCCcccccC--CCeEEEecH-------HHHHHHHhhcCceEeccCCcHHHHHH
Q psy16848 298 HAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN--IGGYIVGTK-------NFIDTIRSYAAGFIFTTSLPPTVLAG 368 (514)
Q Consensus 298 ~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~--~GG~l~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~a 368 (514)
+..-+. ..+ ..+........|+++-|.||.+++ .+.++..+. .+-+.+.... +++++...++.
T Consensus 204 h~~~~~-~~~--~l~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~-----STSPsY~l~AS 275 (557)
T COG1982 204 HPAHFD-FSP--MLPESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQ-----STSPSYPLMAS 275 (557)
T ss_pred Cccccc-ccc--cCcchhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHc-----cCCchHHHHHH
Confidence 984331 111 111122235789999999999976 225554432 2222222111 33455555554
Q ss_pred HHHHHHHhhhchHHHH----HHHHHHHHHHHHHHHHhC-CCccccCC------C---------------c-EEEEEeC-C
Q psy16848 369 AREAIRILSSQEGVEL----RAKHQDIVAYLRNELIQI-GFPVEHTP------S---------------H-IIPIKIG-N 420 (514)
Q Consensus 369 ~~~~l~~~~~~~~~~~----~~~~~~~~~~l~~~L~~~-g~~~~~~~------~---------------~-~~~i~l~-~ 420 (514)
+-.+-... .....+. .+...+.++.+++...+. ++++..+. + + -+.+..+ .
T Consensus 276 lD~Ar~~~-~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~ 354 (557)
T COG1982 276 LDVARMQE-GNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEF 354 (557)
T ss_pred HHHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCC
Confidence 44422222 2222333 455566666666666665 34433222 1 1 1223332 3
Q ss_pred CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeC--CCCCHHHHHHHHHHHH
Q psy16848 421 PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPT--PFHTREMIDKFVTDLL 475 (514)
Q Consensus 421 ~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~--~~~t~e~id~~~~~l~ 475 (514)
+.....+.+.| +++||...- .++..+-+.++ ...+..+++.+++..+
T Consensus 355 Gipg~~v~~~L-~e~gii~e~-------~~d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 355 GIPGAIVAKYL-REHGIIPEE-------TGDYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred CCcHHHHHHHH-HHcCCeeee-------cCCceeeEEeeeccchHHHHHHHHHHHHH
Confidence 34566777777 589988752 22223333333 2234445555555554
No 366
>KOG0258|consensus
Probab=99.54 E-value=2e-12 Score=123.91 Aligned_cols=337 Identities=15% Similarity=0.121 Sum_probs=204.2
Q ss_pred hHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcCC---CcEEEEecccc-ccccchhhccccCCCceEEecC
Q psy16848 33 GGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQK---EAGLVFTSCYV-ANDSTLFTLGKMIPGLHYISDA 108 (514)
Q Consensus 33 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~---~~~i~~~sGt~-a~~~~l~~l~~~~~gd~v~~~~ 108 (514)
++.+...+.+...|.+.+.+..+.|...+++.+++-+.+.=|. +.-||.|+|++ |+...|..+. .++.+-|+++-
T Consensus 90 Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~-~~~~~GvliPi 168 (475)
T KOG0258|consen 90 DAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLI-AGKKTGVLIPI 168 (475)
T ss_pred HHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHh-cCCCCceEeec
Confidence 4555556666666655555566667666666777666666553 23477777765 5666665554 35888899998
Q ss_pred ccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccc
Q psy16848 109 GNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAV 188 (514)
Q Consensus 109 ~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (514)
+-|+-.-..+.+.|...+.|--+ +
T Consensus 169 PQYPLYsAti~l~~~~~v~YyLd----------------------------------------------------E---- 192 (475)
T KOG0258|consen 169 PQYPLYSATISLLGGTQVPYYLD----------------------------------------------------E---- 192 (475)
T ss_pred CCCchhHHHHHHhCCcccceeec----------------------------------------------------c----
Confidence 88877666667777766654221 0
Q ss_pred cccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccC-CCceEEEEec
Q psy16848 189 GLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDV-KIPKLVAFET 267 (514)
Q Consensus 189 g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~-~~~~~vv~~~ 267 (514)
..+|+ -|.+++++.++++.. =+++++++-|
T Consensus 193 ----e~~W~---------------------------------------------ld~~el~~~~~eA~k~i~~r~lvvIN 223 (475)
T KOG0258|consen 193 ----ESNWS---------------------------------------------LDVAELERSVDEARKGINPRALVVIN 223 (475)
T ss_pred ----ccCCC---------------------------------------------CCHHHHHHHHHHHhccCCceEEEEEC
Confidence 11222 156777777776642 2578999999
Q ss_pred CCCCCccccC---HHHHHHHHHHcCCEEEEecccccccc--CCCCCCcccc----CCCc--cCceEEEcCCcccccC---
Q psy16848 268 VHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLY--GEHGAGIGER----DGQL--HNMDIISGTLGKAFGN--- 333 (514)
Q Consensus 268 ~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~--g~~~~~~~~~----~~~~--~~~di~~~S~sK~lg~--- 333 (514)
|.||||.+.+ +++|.++|.+++++|+.||+|....+ +....++... .... .-..+-+.|.||++.+
T Consensus 224 PGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG 303 (475)
T KOG0258|consen 224 PGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECG 303 (475)
T ss_pred CCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeec
Confidence 9999999999 89999999999999999999985443 2222222111 1000 1122445578898733
Q ss_pred -CCeEEE---ecHHHHHHHHhhcCceEeccCCcHHHHHHHH----------HHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy16848 334 -IGGYIV---GTKNFIDTIRSYAAGFIFTTSLPPTVLAGAR----------EAIRILSSQEGVELRAKHQDIVAYLRNEL 399 (514)
Q Consensus 334 -~GG~l~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~----------~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 399 (514)
.||++- .+++..+.+.+....-. ..+...+...- ...+... ..-+.+.+.++.++..+.+.+
T Consensus 304 ~RGGYmEv~n~~prv~~qi~Kl~si~l---c~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~-~Ekd~il~~l~~ra~l~~~~~ 379 (475)
T KOG0258|consen 304 QRGGYMESLNRDPRVKQQIKKLASIKL---CPQVSGQKLVDLVVNPPKPGDPSYDLFS-SEKDGILSSLRSRAKLTEDAF 379 (475)
T ss_pred ccCCeeecccCChhHHHHHHHHHhhhh---cCCccchhhhceecCCCCCCCcchhhhh-hhhHhHHHHHHHHhHHHHHHH
Confidence 348862 23444433332221100 00000000000 0111111 112347778888888999999
Q ss_pred HhC-CCccccCCCcEEE---EEeCCC----------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHH
Q psy16848 400 IQI-GFPVEHTPSHIIP---IKIGNP----------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTRE 465 (514)
Q Consensus 400 ~~~-g~~~~~~~~~~~~---i~l~~~----------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e 465 (514)
.++ |+....++|.|+. +.+|.. ....-.+.+|++..||.+.||+.++...+.-.+|..+-.-.. +
T Consensus 380 ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~~-~ 458 (475)
T KOG0258|consen 380 NSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPGL-E 458 (475)
T ss_pred hhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCchh-H
Confidence 998 8888888888765 445532 112346678888999999999998988889999988753222 3
Q ss_pred HHHHHHHHHHHHHHH
Q psy16848 466 MIDKFVTDLLAVWKS 480 (514)
Q Consensus 466 ~id~~~~~l~~~l~~ 480 (514)
-++++-+.-++++.+
T Consensus 459 ~i~~~~~fH~~f~~~ 473 (475)
T KOG0258|consen 459 IIEKFKKFHAEFMDE 473 (475)
T ss_pred HHHHHHHHHHHHHHh
Confidence 344444443444443
No 367
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.51 E-value=2.4e-12 Score=123.60 Aligned_cols=255 Identities=20% Similarity=0.222 Sum_probs=146.3
Q ss_pred chHHHHHHHHHHhHcCCCcEEE---EeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLV---FTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNH 135 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~---~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~ 135 (514)
+.-++.+++-+|+.||.+++++ +.|||||+..+|..+++ |||+++.-. |. -++.
T Consensus 53 D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~Lr--pGD~ll~~t-------------G~--------PYDT 109 (403)
T PF06838_consen 53 DIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLR--PGDELLSIT-------------GK--------PYDT 109 (403)
T ss_dssp -HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH----TT-EEEESS-------------SS----------CC
T ss_pred CccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCC--CCCeEEEcC-------------CC--------chhh
Confidence 4568899999999999999988 57999999999999988 999988521 11 1355
Q ss_pred HHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhc
Q psy16848 136 LTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTL 215 (514)
Q Consensus 136 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l 215 (514)
|++.|.-... +
T Consensus 110 L~~VIG~~g~-------------------------------------------------~-------------------- 120 (403)
T PF06838_consen 110 LEEVIGIRGN-------------------------------------------------G-------------------- 120 (403)
T ss_dssp HHHHHTSSSS-------------------------------------------------S--------------------
T ss_pred HHHHhCCCCC-------------------------------------------------C--------------------
Confidence 6665543221 1
Q ss_pred cCCceeeecchHHHHhhCCCCEEEec-CCChhHHHHHHhhccCCCceEEEEecCCCCCcccc----C---HHHHHHHHHH
Q psy16848 216 VNPEVAIHASMIQGIRNSSAPKIIYR-HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAIC----P---LKELCEVSHQ 287 (514)
Q Consensus 216 ~~~~v~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~----~---l~~l~~l~~~ 287 (514)
...+.-.|.+...++ .+|-..+.+.+++..++++|++.+.-- .|..+ + ++++.+++|+
T Consensus 121 -----------~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRS---rGYs~R~sl~i~~I~~~i~~vk~ 186 (403)
T PF06838_consen 121 -----------PGSLKEFGIKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRS---RGYSWRPSLTIEEIKEIIKFVKE 186 (403)
T ss_dssp -----------SSSTGGGT-EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S----TTSSS----HHHHHHHHHHHHH
T ss_pred -----------CCChHHhCceeEEEeecCCCCcCHHHHHHhhccCceEEEEecC---CCCCCCCCCCHHHHHHHHHHHHh
Confidence 123344566777777 233333334444433467899887543 23332 2 4566666666
Q ss_pred c--CCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC----CCeEEEecHHHHHHHHhhcC--ceEecc
Q psy16848 288 H--GALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN----IGGYIVGTKNFIDTIRSYAA--GFIFTT 359 (514)
Q Consensus 288 ~--gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~----~GG~l~~~~~~~~~l~~~~~--~~~~~~ 359 (514)
. ++++++|.+|+.+..-. +. ...++|++++|+-|..|+ .|||+++++++++....... +.+-..
T Consensus 187 ~~p~~iifVDNCYGEFvE~~------EP--~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~ 258 (403)
T PF06838_consen 187 INPDVIIFVDNCYGEFVETQ------EP--TEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEV 258 (403)
T ss_dssp H-TTSEEEEE-TTTTTTSSS-------G--GGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGS
T ss_pred hCCCeEEEEeCCcceecccc------Cc--cccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCcccccc
Confidence 5 89999999998544211 11 144899999999999875 55999999999998764322 211111
Q ss_pred CCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCC----Cc-EEEEEeCCCccHHHHHHHHH
Q psy16848 360 SLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTP----SH-IIPIKIGNPALNTKICDMLL 432 (514)
Q Consensus 360 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~-~~~i~l~~~~~~~~~~~~Ll 432 (514)
+.+.-......+.|= ..+ .+.....+-+......++++|+++.+.. +. +-.+.+.+......||+..-
T Consensus 259 G~t~~~~R~~~QGlF--lAP---~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~~~e~l~~FC~~iQ 331 (403)
T PF06838_consen 259 GATLGTNRLMFQGLF--LAP---HVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELGSPEKLIAFCQGIQ 331 (403)
T ss_dssp S--TTTHHHHHHHHH--HHH---HHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-SSHHHHHHHHHHHH
T ss_pred ccCcchHHHHHhHHh--hch---HHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECCCHHHHHHHHHHHH
Confidence 111111222222221 122 2555555566667777888899876542 33 56688888777778888873
No 368
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.47 E-value=3e-11 Score=120.26 Aligned_cols=201 Identities=11% Similarity=0.073 Sum_probs=151.1
Q ss_pred CceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-eE
Q psy16848 259 IPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG-GY 337 (514)
Q Consensus 259 ~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G-G~ 337 (514)
+.+.+.+++..+.+|...+ ++.+.+++++|+|.+-+++.. +.+- .+.|+++.+..|.+|++| ++
T Consensus 143 d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~--------pid~--~~~dvi~agsQKnlgP~Gltv 207 (364)
T PRK12462 143 RAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSR--------PFDV--EAYGMVYAHAQKNLGPAGVTV 207 (364)
T ss_pred CCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCC--------CCCh--HHccEEEeeccccCCCCceEE
Confidence 4677888888889999997 333347999999999997653 2221 134999999999999989 88
Q ss_pred EEecHHHHHHHHhhcCce-E---------eccCCcHHHHHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHHHHhCC-C
Q psy16848 338 IVGTKNFIDTIRSYAAGF-I---------FTTSLPPTVLAGAREAIRILSSQ--EGVELRAKHQDIVAYLRNELIQIG-F 404 (514)
Q Consensus 338 l~~~~~~~~~l~~~~~~~-~---------~~~~~~~~~~~a~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~ 404 (514)
++.+++.+++.......+ . .-.+++.....++..+++.+.++ +++.+.++.+++++.+.+.+++.. +
T Consensus 208 vivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~ 287 (364)
T PRK12462 208 AIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEV 287 (364)
T ss_pred EEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 899999887765422111 0 01145667778999999988777 899999999999999999999983 4
Q ss_pred ccc--c--CCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q psy16848 405 PVE--H--TPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 405 ~~~--~--~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~ 479 (514)
-.. . .++. -+.+++++.....+|.+.+ +++|+....|+.. .+.+|.|+--.++.|+++.+++-|+++-+
T Consensus 288 ~~~~~~~~~RS~mnv~f~~~~~~l~~~f~~~a-~~~gl~~lkGhr~-----vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 288 IDCHAHRAARSTMNVAFRFRQPRLDTLFKEQS-TEAGFCGLSGHRS-----IGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred ccCCCChhhcCcceEEEEcCCHHHHHHHHHHH-HHCCCccccCCcc-----cCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 321 1 1232 3456777766678899999 5999998766642 34699999889999999999999999865
Q ss_pred H
Q psy16848 480 S 480 (514)
Q Consensus 480 ~ 480 (514)
+
T Consensus 362 ~ 362 (364)
T PRK12462 362 R 362 (364)
T ss_pred h
Confidence 4
No 369
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.45 E-value=2.1e-11 Score=118.96 Aligned_cols=246 Identities=14% Similarity=0.201 Sum_probs=155.6
Q ss_pred HHhhCCCCEEEecC-CChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCC
Q psy16848 229 GIRNSSAPKIIYRH-NDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHG 307 (514)
Q Consensus 229 ~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~ 307 (514)
...+.|.+++.|+. .+-..+.+.|++...++++++.+++|+.-.=.--++.+|+++.+++|..|..|.+-.-...|...
T Consensus 173 SAam~G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~r 252 (496)
T COG1003 173 SAAMAGFKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLAR 252 (496)
T ss_pred hHhhcCceEEEEecCCCCCccHHHHHHHhccceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhcccc
Confidence 33444555555552 22233333344444467999999999655333344999999999999999999998744443211
Q ss_pred CCccccCCCccCceEEEcCCcccccC------CC-eEEEecHHHHHHHHhh----cC-ceEec------------cCCcH
Q psy16848 308 AGIGERDGQLHNMDIISGTLGKAFGN------IG-GYIVGTKNFIDTIRSY----AA-GFIFT------------TSLPP 363 (514)
Q Consensus 308 ~~~~~~~~~~~~~di~~~S~sK~lg~------~G-G~l~~~~~~~~~l~~~----~~-~~~~~------------~~~~~ 363 (514)
.- +.+.|++-..+||+|+. +| |-+.++.+++..+..- .. .+... .-.|.
T Consensus 253 -----PG--d~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~ 325 (496)
T COG1003 253 -----PG--DMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSA 325 (496)
T ss_pred -----cc--ccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcc
Confidence 11 44889999999999953 22 6677777777665431 10 00000 01222
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccCC--Cc--EEEEE-e--CCCccHHHHHHHHHHhC
Q psy16848 364 TVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHTP--SH--IIPIK-I--GNPALNTKICDMLLKEK 435 (514)
Q Consensus 364 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~--~~--~~~i~-l--~~~~~~~~~~~~Ll~~~ 435 (514)
.....+..-+..+..+++...-+...-+++|+.+.|+.. .+++.+.. .+ ++..+ + ..+....+++++|+ +.
T Consensus 326 ~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLl-D~ 404 (496)
T COG1003 326 SILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLL-DY 404 (496)
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHH-hc
Confidence 233333333333335566777777788999999999974 44443331 22 22222 1 12456789999998 99
Q ss_pred CeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCc
Q psy16848 436 GHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSLDLP 484 (514)
Q Consensus 436 GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~~~~ 484 (514)
|+..-...||.. =...+-+-++-..+++++|+++++|.++.++.+..
T Consensus 405 GfHaPT~~FPli--V~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~ 451 (496)
T COG1003 405 GFHAPTMYFPLI--VAGTLMIEPTESESKEELDRFIDAMIAIREEADAV 451 (496)
T ss_pred CCCCCcccCccc--cccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 999866666521 14578888888888999999999999998876543
No 370
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.41 E-value=2.8e-11 Score=117.14 Aligned_cols=240 Identities=13% Similarity=0.111 Sum_probs=124.4
Q ss_pred CCCCEEEec----CCChhHHHHHHhhccCCCceEE-EEecCCCCCccccCHHHHHHHH----HHcCCEEEEecccccccc
Q psy16848 233 SSAPKIIYR----HNDVNHLTQVLENMDVKIPKLV-AFETVHSMTGAICPLKELCEVS----HQHGALTFVDEVHAVGLY 303 (514)
Q Consensus 233 ~g~~~~~v~----~~d~~~l~~~l~~~~~~~~~~v-v~~~~~nptG~~~~l~~l~~l~----~~~gv~li~Dea~~~g~~ 303 (514)
.|.+.+.|| ..|++.+++.+.+. +.+|.+ +++..+||+|.+++-+-+++++ .+.+..++.|++|++-.+
T Consensus 144 ~Giemi~VpM~~dGPDmD~Ve~LV~~D--~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL 221 (425)
T PF12897_consen 144 FGIEMIPVPMTEDGPDMDMVEELVAED--PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHL 221 (425)
T ss_dssp CT-EEEEEEEETTEE-HHHHHHHTHTS--TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BS
T ss_pred hCcEEEecCCCCCCCCHHHHHHHHhcC--CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeec
Confidence 344444444 12566666665432 235655 5566789999999965555555 356999999999996555
Q ss_pred -CCCCC----Cccc---cCCCccCceEEEcCCccccc-CCC-eEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHH
Q psy16848 304 -GEHGA----GIGE---RDGQLHNMDIISGTLGKAFG-NIG-GYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAI 373 (514)
Q Consensus 304 -g~~~~----~~~~---~~~~~~~~di~~~S~sK~lg-~~G-G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l 373 (514)
+.... .+.+ -.+ ..+..+++.|.||.-- +.| +++.++++-++.+.+....- +.+..-+.+..=...+
T Consensus 222 ~~~~~~~~~~nil~~~~~AG-npdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~--tIgpdKvNQLRHvrff 298 (425)
T PF12897_consen 222 YDEEPRDALLNILDACAKAG-NPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQ--TIGPDKVNQLRHVRFF 298 (425)
T ss_dssp SSSSS------HHHHHHHTT--TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH---S---HHHHHHHHHHH
T ss_pred cccccchhhhHHHHHHHHcC-CCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCc--eeCccHHHHHHHHHHh
Confidence 22211 1111 122 3467788999999763 346 88999988887776654333 2344555555544444
Q ss_pred HHhh---hchHHHHHHHHHHHHHHHHHHHHh-----CCC-ccccCCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEeccc
Q psy16848 374 RILS---SQEGVELRAKHQDIVAYLRNELIQ-----IGF-PVEHTPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPIN 443 (514)
Q Consensus 374 ~~~~---~~~~~~~~~~~~~~~~~l~~~L~~-----~g~-~~~~~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~ 443 (514)
.... ..++++..+.++-+.+.+.+.|++ .++ .+..|.|+ |+.+...+ ..+..+.+.+ ++.||.+++..
T Consensus 299 ~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~-G~AkrvV~la-keAGV~LT~AG 376 (425)
T PF12897_consen 299 KDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD-GTAKRVVELA-KEAGVALTPAG 376 (425)
T ss_dssp HSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-T-HHHHHHHH-HHTTEE---TT
T ss_pred cChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-ChHHHHHHHH-HHhCceeCCCC
Confidence 4221 122333333333334444444433 234 34556655 77787766 3577888888 69999999843
Q ss_pred --CCCC-CCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 444 --YPTV-PVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 444 --~~~~-~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
+|.. ...++.||++++ .-+.+|++.+++.+.-+++-
T Consensus 377 AtfPyg~DP~D~nIRiAPS-~P~leel~~Am~~~~~cv~l 415 (425)
T PF12897_consen 377 ATFPYGKDPRDSNIRIAPS-YPSLEELETAMDVFATCVKL 415 (425)
T ss_dssp TTSGGG--TTS-EEEE--S-SS-HHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCcEEecCC-CCCHHHHHHHHHHHHHHHHH
Confidence 3222 234789999998 57889999999888776543
No 371
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.40 E-value=1.5e-11 Score=124.43 Aligned_cols=250 Identities=18% Similarity=0.140 Sum_probs=161.6
Q ss_pred chHHHHHHHHHHhHcCCC---------cEEEEeccccccccchhhccc-c-----------CCCceEEecCccchhhhhh
Q psy16848 59 SLFHEKLEEDVAKLHQKE---------AGLVFTSCYVANDSTLFTLGK-M-----------IPGLHYISDAGNHASMIQG 117 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~---------~~i~~~sGt~a~~~~l~~l~~-~-----------~~gd~v~~~~~~h~~~~~~ 117 (514)
.++..++-+++++++|.+ ..+++++||++|+.++.+... . .+.-.|++++..|.++..+
T Consensus 78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka 157 (373)
T PF00282_consen 78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA 157 (373)
T ss_dssp HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence 456667778888888876 268889999999988866432 0 1234789999999999999
Q ss_pred hhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCc
Q psy16848 118 IRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAG 197 (514)
Q Consensus 118 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 197 (514)
++..|..++.++-++ .|
T Consensus 158 a~~lGlg~~~I~~~~---------------------------------------------------------------~~ 174 (373)
T PF00282_consen 158 ARILGLGVRKIPTDE---------------------------------------------------------------DG 174 (373)
T ss_dssp HHHTTSEEEEE-BBT---------------------------------------------------------------TS
T ss_pred cceeeeEEEEecCCc---------------------------------------------------------------ch
Confidence 999888766544321 00
Q ss_pred eeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCC--CceEEEEecCCCCCccc
Q psy16848 198 IGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVK--IPKLVAFETVHSMTGAI 275 (514)
Q Consensus 198 ~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~--~~~~vv~~~~~nptG~~ 275 (514)
.-|.+.+++.+++...+ .+-+|+.+.....+|.+
T Consensus 175 --------------------------------------------~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~ 210 (373)
T PF00282_consen 175 --------------------------------------------RMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI 210 (373)
T ss_dssp --------------------------------------------SB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB
T ss_pred --------------------------------------------hhhHHHhhhhhcccccccccceeeeccCCCcccccc
Confidence 00445555555543222 13367777888899999
Q ss_pred cCHHHHHHHHHHcCCEEEEecccccc-ccCCCCCCccccCCCccCceEEEcCCcccccCC-C-eEEEec-HHHHHHHHhh
Q psy16848 276 CPLKELCEVSHQHGALTFVDEVHAVG-LYGEHGAGIGERDGQLHNMDIISGTLGKAFGNI-G-GYIVGT-KNFIDTIRSY 351 (514)
Q Consensus 276 ~~l~~l~~l~~~~gv~li~Dea~~~g-~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~-G-G~l~~~-~~~~~~l~~~ 351 (514)
-|+++|.++|+++++++++|.+++.. .+.+..+. -..+ ...+|-++.++||+++.+ + |+++.+ +..+......
T Consensus 211 D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~--~~~g-i~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~ 287 (373)
T PF00282_consen 211 DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRH--LLFG-IERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSI 287 (373)
T ss_dssp -SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGG--GGTT-GGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEE
T ss_pred cCHHHHhhhccccceeeeecccccccccccccccc--cccc-cccccccccchhhhhcCCccceeEEeecccchHHHhcc
Confidence 99999999999999999999999932 22222211 1223 357899999999999763 3 776655 4444332111
Q ss_pred cCc---------------eEeccCCc-HHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCcccc-CCCcE
Q psy16848 352 AAG---------------FIFTTSLP-PTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEH-TPSHI 413 (514)
Q Consensus 352 ~~~---------------~~~~~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~ 413 (514)
... ..++...+ ......+...|+.+..+++.+..++..+..+++.+.|++. ++++.. +.-++
T Consensus 288 ~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~ 367 (373)
T PF00282_consen 288 NADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNI 367 (373)
T ss_dssp EETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSE
T ss_pred ChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceE
Confidence 100 11111222 3445566667776767888899999999999999999998 577654 34557
Q ss_pred EEEEe
Q psy16848 414 IPIKI 418 (514)
Q Consensus 414 ~~i~l 418 (514)
+.|++
T Consensus 368 vcFr~ 372 (373)
T PF00282_consen 368 VCFRY 372 (373)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 76664
No 372
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.39 E-value=1.3e-10 Score=127.08 Aligned_cols=329 Identities=12% Similarity=0.118 Sum_probs=202.0
Q ss_pred hhhhhcCCceeeecccCCCCC---ChhHHHHHHHHHHHhCCCCCC--cCcccCcchHHHHHHHHHHhHcCCCcE--EEEe
Q psy16848 10 FKQVHKSNRVTCRLSSVQYKV---PKGGRKCLGEALEKFGTGAGG--TRNISGNSLFHEKLEEDVAKLHQKEAG--LVFT 82 (514)
Q Consensus 10 ~~~~~~~g~~~~d~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~la~~~~~~~~--i~~~ 82 (514)
++.+...+..+..|.+..|.+ +|.+.+.+.+--+ |-+.++- +..+.|.-+..-+++..+++++|.+-+ -+..
T Consensus 55 ~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~-~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d 133 (939)
T TIGR00461 55 LKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPG-WYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLD 133 (939)
T ss_pred HHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCch-hhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccc
Confidence 444444554454554544444 3555545543211 1122221 122456677778899999999998843 5566
Q ss_pred ccccccccchhhcc-ccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccC
Q psy16848 83 SCYVANDSTLFTLG-KMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTG 161 (514)
Q Consensus 83 sGt~a~~~~l~~l~-~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 161 (514)
.+|.+.++++.+.. ..++++.|++++..|+...+.++
T Consensus 134 ~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~------------------------------------------ 171 (939)
T TIGR00461 134 EGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLH------------------------------------------ 171 (939)
T ss_pred hhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHH------------------------------------------
Confidence 67666665555532 12245899999999988774432
Q ss_pred CccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEec
Q psy16848 162 AICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYR 241 (514)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~ 241 (514)
..+...|.+++.++
T Consensus 172 ------------------------------------------------------------------t~a~~~g~~v~~~~ 185 (939)
T TIGR00461 172 ------------------------------------------------------------------TRAKPFGIEVIVVD 185 (939)
T ss_pred ------------------------------------------------------------------HHHHhcCcEEEEEc
Confidence 11122333444442
Q ss_pred CCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecccc-ccccCCCCCCccccCCCccCc
Q psy16848 242 HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHA-VGLYGEHGAGIGERDGQLHNM 320 (514)
Q Consensus 242 ~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~-~g~~g~~~~~~~~~~~~~~~~ 320 (514)
.+. +++.. ++.++++.+| |..|.+.++++|.++++++|.+++++.-.. ++.+-+ .+ +.++
T Consensus 186 ---~~~----l~~~~--~~~~v~~q~P-n~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~--------Pg-e~Ga 246 (939)
T TIGR00461 186 ---CSD----IKKAV--DVFGCLLQYP-ATDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTP--------PG-HYGA 246 (939)
T ss_pred ---HHH----HhhcC--CEEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCC--------HH-HcCC
Confidence 222 22222 2567777777 567999999999999999999999954433 222211 12 4589
Q ss_pred eEEEcCCcccc-----cCCC-eEEEecHHHHHHHHhhcCc----------eEec-------------c-CC-cHHHHHHH
Q psy16848 321 DIISGTLGKAF-----GNIG-GYIVGTKNFIDTIRSYAAG----------FIFT-------------T-SL-PPTVLAGA 369 (514)
Q Consensus 321 di~~~S~sK~l-----g~~G-G~l~~~~~~~~~l~~~~~~----------~~~~-------------~-~~-~~~~~~a~ 369 (514)
||++++..++- |+++ |++.+++++...+....-+ +.++ + +. +...+.+.
T Consensus 247 Di~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~ 326 (939)
T TIGR00461 247 DIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLAN 326 (939)
T ss_pred cEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHH
Confidence 99976555432 2223 9999998888776422111 1110 0 11 11112222
Q ss_pred HHH--HHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccCC-CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCC
Q psy16848 370 REA--IRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHTP-SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPT 446 (514)
Q Consensus 370 ~~~--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~ 446 (514)
.++ +.++..+++.++.++...+..++.+.|.+.|+++..+. -.-+.++++. .+..++.+.+. ++||.++.
T Consensus 327 ~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~~fF~~~~v~~~~-~~~~~i~~~~~-~~gi~l~~----- 399 (939)
T TIGR00461 327 VASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINKTWFDTLTVKVGN-GISSELLKAAE-EFNINLRA----- 399 (939)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCccceEEEEeCC-CCHHHHHHHHH-HCCCeeee-----
Confidence 222 44455677888999999999999999999998876541 1133455532 34788999995 99999763
Q ss_pred CCCCCcEEEEEeCCCCCHHHHHHHHHHHH
Q psy16848 447 VPVGEEKIRLAPTPFHTREMIDKFVTDLL 475 (514)
Q Consensus 447 ~~~~~~~iRl~~~~~~t~e~id~~~~~l~ 475 (514)
..++.++++++-.+|++|++.+++.+.
T Consensus 400 --~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 400 --VDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred --cCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 224589999999999999999999995
No 373
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.36 E-value=6.3e-11 Score=119.17 Aligned_cols=199 Identities=20% Similarity=0.305 Sum_probs=112.4
Q ss_pred CCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC---
Q psy16848 257 VKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN--- 333 (514)
Q Consensus 257 ~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~--- 333 (514)
.+++++|++++|+ ..|.+-++++|.++++++|.++++ .+.-.... .....+ +.++||++++ +|.||.
T Consensus 195 ~~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~------~l~~Pg-e~GADI~vg~-~Q~fg~p~~ 264 (429)
T PF02347_consen 195 DDDTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-GADPNALG------GLKSPG-EYGADIVVGE-HQTFGIPMG 264 (429)
T ss_dssp STTEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCC------TC--GG-GGT-SEEEEC-CTTTT---C
T ss_pred ccCeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHh------CcCChh-hcCccEEeeC-CCCCcccCC
Confidence 4568999999995 669999999999999999999987 55442211 111122 4589999877 887764
Q ss_pred ---CC-eEEEecHHHHHHHHhhcC----------ceEec--------------c--CCcHHHH-HHHHHHHHHhhhchHH
Q psy16848 334 ---IG-GYIVGTKNFIDTIRSYAA----------GFIFT--------------T--SLPPTVL-AGAREAIRILSSQEGV 382 (514)
Q Consensus 334 ---~G-G~l~~~~~~~~~l~~~~~----------~~~~~--------------~--~~~~~~~-~a~~~~l~~~~~~~~~ 382 (514)
++ |++.++++++..+.-..- .+..+ . ..+...+ .++..-+..+..+++.
T Consensus 265 ~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~ 344 (429)
T PF02347_consen 265 FGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLR 344 (429)
T ss_dssp CC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHH
Confidence 22 999999987776642111 11111 0 1122222 2333334455578899
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCccccCC-CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCC
Q psy16848 383 ELRAKHQDIVAYLRNELIQI-GFPVEHTP-SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTP 460 (514)
Q Consensus 383 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~ 460 (514)
++.++...++.++.+.|.+. ++++..+. -.++....++ ....++.++.. ..|+... . . ..+.+-++++-
T Consensus 345 ~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~-~~~~~l~~~~~-~~gl~~~---~---~-~~~~~li~~TE 415 (429)
T PF02347_consen 345 EIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKD-KEVEELLKRGI-EGGLNLR---Y---P-DDGALLICVTE 415 (429)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS--HHHHHHHHTT-----EEEG---G---G--SSEEEEE--T
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCc-HHHHHHHHHHH-hcCCCcc---c---c-CCCeEEEEccC
Confidence 99999999999999999996 44433221 1133333332 33334555553 5564432 1 1 23488899999
Q ss_pred CCCHHHHHHHHHHH
Q psy16848 461 FHTREMIDKFVTDL 474 (514)
Q Consensus 461 ~~t~e~id~~~~~l 474 (514)
..|++|+|++++++
T Consensus 416 ~~t~edid~lv~~f 429 (429)
T PF02347_consen 416 TRTKEDIDRLVEAF 429 (429)
T ss_dssp T--HHHHHHHHH--
T ss_pred CCCHHHHHHHHhcC
Confidence 99999999999864
No 374
>KOG2467|consensus
Probab=99.29 E-value=2.1e-09 Score=102.70 Aligned_cols=225 Identities=17% Similarity=0.171 Sum_probs=140.5
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEE
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDII 323 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~ 323 (514)
|++.+++..... ++|+++.-.- -.-..++.++++++|.+.|++++.|.+|--|..... -++.. ..-+|||
T Consensus 177 DYD~Le~~A~~f---rPk~iiaG~S--aY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~--vipsP---Fey~DiV 246 (477)
T KOG2467|consen 177 DYDKLEKTATLF---RPKLIIAGTS--AYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAG--VIPSP---FEYCDIV 246 (477)
T ss_pred ehHHHHHHHHhc---CCcEEEeccc--cchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcc--cCCCc---cccccee
Confidence 677777766554 3566664322 223556689999999999999999999986554211 01112 2368999
Q ss_pred EcCCcccc-cCCCeEEEecHHH---------------HHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHH
Q psy16848 324 SGTLGKAF-GNIGGYIVGTKNF---------------IDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAK 387 (514)
Q Consensus 324 ~~S~sK~l-g~~GG~l~~~~~~---------------~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 387 (514)
+.+.||.+ |+.||++.-++.+ -+.+.....+ +...++....++++..+|..-..+...+..++
T Consensus 247 TTTTHKsLRGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP-~lQGGPHNhtIaalAvALkQa~tpefk~Yq~q 325 (477)
T KOG2467|consen 247 TTTTHKSLRGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFP-GLQGGPHNHTIAALAVALKQAMTPEFKEYQKQ 325 (477)
T ss_pred eccccccccCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccc-cccCCCCcchHHHHHHHHHhhCCHHHHHHHHH
Confidence 99999999 7777777554321 1222111111 11223334455555666776667778888999
Q ss_pred HHHHHHHHHHHHHhCCCccccC--CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCC--CCCCcEEEEEeCC---
Q psy16848 388 HQDIVAYLRNELIQIGFPVEHT--PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTV--PVGEEKIRLAPTP--- 460 (514)
Q Consensus 388 ~~~~~~~l~~~L~~~g~~~~~~--~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~--~~~~~~iRl~~~~--- 460 (514)
+.++...+.+.|.++|+.++.. ..+++.+.+........-+++.++.-+|.+..-..|.. ...++.+|+..+.
T Consensus 326 V~~Nakala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTs 405 (477)
T KOG2467|consen 326 VLKNAKALASALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTS 405 (477)
T ss_pred HHHHHHHHHHHHHHcCceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcc
Confidence 9999999999999999988643 45677777754332333333433455666542222111 1235789996653
Q ss_pred -CCCHHHHHHHHHHHHHHHH
Q psy16848 461 -FHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 461 -~~t~e~id~~~~~l~~~l~ 479 (514)
...++|++++.+.|.+.++
T Consensus 406 RG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 406 RGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred cCccHHHHHHHHHHHHHHHH
Confidence 4457888888888877553
No 375
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.29 E-value=1.1e-10 Score=114.77 Aligned_cols=147 Identities=20% Similarity=0.163 Sum_probs=100.7
Q ss_pred HHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCC-CccccCHHHHHHHHHHcCCEEEEeccccccccCC
Q psy16848 227 IQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSM-TGAICPLKELCEVSHQHGALTFVDEVHAVGLYGE 305 (514)
Q Consensus 227 ~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~np-tG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~ 305 (514)
...+++.|++++.+...+. .-.+.++.++++++++++=.+-+|. .-...+++++.++|+++|+++++|.+-+.-....
T Consensus 125 ~d~~~~aG~~l~EvG~tn~-t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e 203 (395)
T COG1921 125 PDIIRLAGAKLVEVGTTNR-THLKDYELAINENTALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKE 203 (395)
T ss_pred hHHHHHcCCEEEEecccCc-CCHHHHHHHhccCCeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecCCccccccc
Confidence 3455666777777764332 1223344445667887765554443 2233458999999999999999999986322111
Q ss_pred CCCCccccCCCccCceEEEcCCcccccC-CCeEEEecHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhch
Q psy16848 306 HGAGIGERDGQLHNMDIISGTLGKAFGN-IGGYIVGTKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQE 380 (514)
Q Consensus 306 ~~~~~~~~~~~~~~~di~~~S~sK~lg~-~GG~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 380 (514)
+ ...+.. ..++|+|++|..|.+++ .+|++++++++++.+++..... ........+++..++|+.+....
T Consensus 204 ~--~l~~~l--a~GaDLV~~SgdKllgGPqaGii~GkKelI~~lq~~~l~R--alrv~K~tla~l~~aLe~y~~~~ 273 (395)
T COG1921 204 P--DLREAL--ALGADLVSFSGDKLLGGPQAGIIVGKKELIEKLQSHPLKR--ALRVDKETLAALEAALELYLQPE 273 (395)
T ss_pred c--chhHHH--hcCCCEEEEecchhcCCCccceEechHHHHHHHHhhhhhh--hhhcCcHhHHHHHHHHHHHcCch
Confidence 1 111111 45899999999999965 5599999999999998765554 55788899999999999886543
No 376
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.25 E-value=6.2e-10 Score=103.49 Aligned_cols=257 Identities=19% Similarity=0.250 Sum_probs=157.6
Q ss_pred chHHHHHHHHHHhHcCCCcEEE---EeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHH
Q psy16848 59 SLFHEKLEEDVAKLHQKEAGLV---FTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNH 135 (514)
Q Consensus 59 ~~~~~~~~~~la~~~~~~~~i~---~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~ 135 (514)
+--++.|++-.|+.+|.+.+++ +-|||+|+..+|..+++ |||+++.- +|. -++.
T Consensus 64 D~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LR--pgDell~i-------------~G~--------PYDT 120 (416)
T COG4100 64 DLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILR--PGDELLYI-------------TGS--------PYDT 120 (416)
T ss_pred ccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccC--CCCeEEEe-------------cCC--------cchh
Confidence 3456789999999999998765 67999999999999987 99988741 111 2456
Q ss_pred HHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhc
Q psy16848 136 LTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTL 215 (514)
Q Consensus 136 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l 215 (514)
|++.+.-. | .|
T Consensus 121 LeevIG~r------------------------------------------------g---~~------------------ 131 (416)
T COG4100 121 LEEVIGLR------------------------------------------------G---EG------------------ 131 (416)
T ss_pred HHHHhccC------------------------------------------------C---CC------------------
Confidence 66555322 1 11
Q ss_pred cCCceeeecchHHHHhhCCCCEEEec-CCChhHHHHHHhhccCCCceEEEEecCC----CCCccccCHHHHHHHHHHc--
Q psy16848 216 VNPEVAIHASMIQGIRNSSAPKIIYR-HNDVNHLTQVLENMDVKIPKLVAFETVH----SMTGAICPLKELCEVSHQH-- 288 (514)
Q Consensus 216 ~~~~v~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~l~~~~~~~~~~vv~~~~~----nptG~~~~l~~l~~l~~~~-- 288 (514)
...+.-+|.+...++ ..+-..+...++...+++||+|.+.--- .|+=.+..+++++++.++.
T Consensus 132 -----------~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inp 200 (416)
T COG4100 132 -----------QGSLKDFGIKYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINP 200 (416)
T ss_pred -----------cccHHHhCcceeecccccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCC
Confidence 234455666677777 2244444455555556779999874322 2322233367777788876
Q ss_pred CCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccC----CCeEEEecHHHHHHHHhhcC--ceEeccCCc
Q psy16848 289 GALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGN----IGGYIVGTKNFIDTIRSYAA--GFIFTTSLP 362 (514)
Q Consensus 289 gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~----~GG~l~~~~~~~~~l~~~~~--~~~~~~~~~ 362 (514)
++++.+|.+|+.+..-. +.- .-++|++.+|+-|..|+ .|||+++++++++....... +.+...+.+
T Consensus 201 n~ivFVDNCYGEFvE~~------EPt--~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPGIG~e~Gat 272 (416)
T COG4100 201 NVIVFVDNCYGEFVEEK------EPT--HVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPGIGREGGAT 272 (416)
T ss_pred CEEEEEeccchhhhhcc------Ccc--ccchhhhccceeeCCCCceeeccceeechHHHHHhhceeeecCCcccccccc
Confidence 79999999998443211 111 33889999999999876 45999999999987643221 111111111
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhCCCccccC----CCc-EEEEEeCCCccHHHHHHHH
Q psy16848 363 PTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQIGFPVEHT----PSH-IIPIKIGNPALNTKICDML 431 (514)
Q Consensus 363 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~-~~~i~l~~~~~~~~~~~~L 431 (514)
--....+...| +.. +.+.....+-.......|+++|+++.+. ++. +-.+.+++..+...||+.+
T Consensus 273 ~~~l~~myqGl--FlA---Phvv~qa~Kga~fta~~le~lg~~~~P~~~~kRtDlIQavkf~~~eKmIaFcqai 341 (416)
T COG4100 273 LYSLREMYQGL--FLA---PHVVSQAVKGAHFTARFLEKLGFPVNPKYDAKRTDLIQAVKFGSKEKMIAFCQAI 341 (416)
T ss_pred HHHHHHHHhhh--ccc---hHHHHHHhhhhHHHHHHHHHcCCCCCCcccccccchhhheecCCHHHHHHHHHHH
Confidence 11111111111 112 2344444454555566777888876432 232 4558888877777888877
No 377
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.25 E-value=1.1e-08 Score=108.61 Aligned_cols=173 Identities=13% Similarity=0.106 Sum_probs=105.2
Q ss_pred ChhHHHHHHhhccC--CCceEEEEecCCCCCccccCHHHHHHHH---HHcCC--EEEEeccccccc---c-CCCCCCccc
Q psy16848 244 DVNHLTQVLENMDV--KIPKLVAFETVHSMTGAICPLKELCEVS---HQHGA--LTFVDEVHAVGL---Y-GEHGAGIGE 312 (514)
Q Consensus 244 d~~~l~~~l~~~~~--~~~~~vv~~~~~nptG~~~~l~~l~~l~---~~~gv--~li~Dea~~~g~---~-g~~~~~~~~ 312 (514)
|.+.+++.+++... ..+-+|+.+.....+|.+-|+++|.++| +++|+ ++++|.||+-.. + .+.+ .+.+
T Consensus 261 d~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~-~~~p 339 (608)
T TIGR03811 261 DINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDD-NFIP 339 (608)
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccc-cccc
Confidence 44555555544321 2244677778888999999999999999 67887 699999999211 1 1110 0000
Q ss_pred ----------------------------cCCCccCceEEEcCCcccccC-CC-e-EEEecHHHHHHHHhhcCc-------
Q psy16848 313 ----------------------------RDGQLHNMDIISGTLGKAFGN-IG-G-YIVGTKNFIDTIRSYAAG------- 354 (514)
Q Consensus 313 ----------------------------~~~~~~~~di~~~S~sK~lg~-~G-G-~l~~~~~~~~~l~~~~~~------- 354 (514)
..+ ...+|-++..+||++.. .+ | +++.++.+.+.+......
T Consensus 340 ~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~g-le~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~ 418 (608)
T TIGR03811 340 YDDLQEVHAEYGVFTEKKEYISREVYNAYKA-ISEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYFATYVFEKGAD 418 (608)
T ss_pred cchhhcccccccccccccccccHhHHHHHhc-CcCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcCcchhcccccc
Confidence 112 24789999999999754 33 5 455556555544321110
Q ss_pred -------eEeccCCcHHHHHHHHHHHHHh--hhchHHHHHHHHHHHHHHHHHHHHhCC-------Ccc---ccCCCcEEE
Q psy16848 355 -------FIFTTSLPPTVLAGAREAIRIL--SSQEGVELRAKHQDIVAYLRNELIQIG-------FPV---EHTPSHIIP 415 (514)
Q Consensus 355 -------~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g-------~~~---~~~~~~~~~ 415 (514)
++...+-+.....++..+++.+ ..+++.++.++..+.++++.+.|++.+ +++ ..+.-+++.
T Consensus 419 ~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~ 498 (608)
T TIGR03811 419 IPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVD 498 (608)
T ss_pred CcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEE
Confidence 0111122233455556666665 456788899999999999999998843 332 344555666
Q ss_pred EEe
Q psy16848 416 IKI 418 (514)
Q Consensus 416 i~l 418 (514)
+++
T Consensus 499 Fr~ 501 (608)
T TIGR03811 499 YVF 501 (608)
T ss_pred EEE
Confidence 665
No 378
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.24 E-value=4.2e-09 Score=103.17 Aligned_cols=334 Identities=18% Similarity=0.204 Sum_probs=201.2
Q ss_pred hhhhcCCceeeecccCCCCC--ChhHHH-HHHHHHHHhCCCCCCc--CcccCcchHHHHHHHHHHhHcCCCc--EEEEec
Q psy16848 11 KQVHKSNRVTCRLSSVQYKV--PKGGRK-CLGEALEKFGTGAGGT--RNISGNSLFHEKLEEDVAKLHQKEA--GLVFTS 83 (514)
Q Consensus 11 ~~~~~~g~~~~d~~~~~~~~--~~~~~~-a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~~--~i~~~s 83 (514)
+.+.++++.+..|.|..|.+ -|.++. .+.+--+ |-+.++-+ .-+.|.-+..-++...+++++|.+- +-+.-.
T Consensus 67 ~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~pe-wyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~De 145 (450)
T COG0403 67 KEIASKNKVFTSFIGAGYYDTYTPPVILRNILENPE-WYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDE 145 (450)
T ss_pred HHHHhcCchhhhhccCcccCCcCcHHHHHHhhcCcc-ccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhh
Confidence 33444666666676666665 255443 4433111 11222211 1123444555677888999999873 344555
Q ss_pred cccccccchhhccc-cCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCC
Q psy16848 84 CYVANDSTLFTLGK-MIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGA 162 (514)
Q Consensus 84 Gt~a~~~~l~~l~~-~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (514)
+|.+.++++.+... .++.+.++++...|+..++.++..
T Consensus 146 aTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tr----------------------------------------- 184 (450)
T COG0403 146 ATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTR----------------------------------------- 184 (450)
T ss_pred HHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhh-----------------------------------------
Confidence 66666666655432 224789999999999988655421
Q ss_pred ccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecC
Q psy16848 163 ICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRH 242 (514)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~ 242 (514)
....|.+++.++.
T Consensus 185 -------------------------------------------------------------------a~~~g~~i~~~~~ 197 (450)
T COG0403 185 -------------------------------------------------------------------AEGLGIEIEVVDA 197 (450)
T ss_pred -------------------------------------------------------------------cccCceEEEEecc
Confidence 0112334444444
Q ss_pred CChhHHHHHHhhccCCCceEEEEecCCCCCc-cccCHHHHHHHHHHcCCEEEEe-ccccccccCCCCCCccccCCCccCc
Q psy16848 243 NDVNHLTQVLENMDVKIPKLVAFETVHSMTG-AICPLKELCEVSHQHGALTFVD-EVHAVGLYGEHGAGIGERDGQLHNM 320 (514)
Q Consensus 243 ~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG-~~~~l~~l~~l~~~~gv~li~D-ea~~~g~~g~~~~~~~~~~~~~~~~ 320 (514)
.|.+.+++. + ...+.++++..|+ -.| ...++.+|.+.++++|.++++= |.-+++.+.++| ..++
T Consensus 198 ~d~~~l~~~-~---~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPG---------e~GA 263 (450)
T COG0403 198 DDLDDLESA-D---DGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPG---------EFGA 263 (450)
T ss_pred chhhhhhhc-c---ccCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCcc---------ccCC
Confidence 444444444 2 2346789999996 456 6666999999999999887753 444445443222 4589
Q ss_pred eEEEcCCccc-----ccCCC-eEEEecHHHHHHHHhhcCceEe------------------------ccCC--cHHHHHH
Q psy16848 321 DIISGTLGKA-----FGNIG-GYIVGTKNFIDTIRSYAAGFIF------------------------TTSL--PPTVLAG 368 (514)
Q Consensus 321 di~~~S~sK~-----lg~~G-G~l~~~~~~~~~l~~~~~~~~~------------------------~~~~--~~~~~~a 368 (514)
||++++..-. ||++- |++.+++++...+.-.--+.+- +.+. +...++.
T Consensus 264 DIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~ 343 (450)
T COG0403 264 DIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLAL 343 (450)
T ss_pred ceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHH
Confidence 9999987752 23222 8999988886554321111100 1111 1222211
Q ss_pred -HHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC--CCccccCCCcE--EEEEeCCCccHHHHHHHHHHhCCeEEeccc
Q psy16848 369 -AREAIRILSSQEGVELRAKHQDIVAYLRNELIQI--GFPVEHTPSHI--IPIKIGNPALNTKICDMLLKEKGHYVQPIN 443 (514)
Q Consensus 369 -~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~--~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~ 443 (514)
+...+-++..+++.++..+..++..++++.|++. |+.+... ..| +.++++. .....+.++.. ..|+.++...
T Consensus 344 ~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~-~fFdt~~v~~~~-~~~~~l~~~~~-~~G~~L~~~~ 420 (450)
T COG0403 344 AASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD-HFFDTFTVRVPE-EVAEALLAAAI-AGGINLRRVD 420 (450)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc-cceeeEEEecch-hHHHHHHHHHH-hcCCceeeec
Confidence 1112223446788999999999999999999976 5666544 222 3355553 34566777774 7898887332
Q ss_pred CCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHH
Q psy16848 444 YPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 444 ~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~ 477 (514)
...+-+++.-.+|+++++.+++.+...
T Consensus 421 -------~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 421 -------ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred -------CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 236778888888999999999998764
No 379
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.24 E-value=1.8e-11 Score=119.20 Aligned_cols=232 Identities=19% Similarity=0.203 Sum_probs=60.3
Q ss_pred ChhHHHHHHHHHHHhCCCCCCcCcccC-cchHHHHHHHHHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCc
Q psy16848 31 PKGGRKCLGEALEKFGTGAGGTRNISG-NSLFHEKLEEDVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAG 109 (514)
Q Consensus 31 ~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~ 109 (514)
.+++.+++.+.+..|..-- .-...| ...-...+++.++.++|++.++++++.+.|+..++.+++ +|.+|+++..
T Consensus 19 ~~~a~~a~~~~a~~Y~nLE--~dl~~G~Rg~R~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la---~~~EvIvsRG 93 (367)
T PF03841_consen 19 SEEAIEAVAEVASGYSNLE--YDLETGKRGSRYAHVEELLCELTGAEAALVVNNNAAAVLLALNTLA---KGKEVIVSRG 93 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccc---cccccccccc
Confidence 4777777777776654210 001111 122345678889999999999999999999999998887 5666666443
Q ss_pred cchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccc
Q psy16848 110 NHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVG 189 (514)
Q Consensus 110 ~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (514)
+-. -+-|.|+.
T Consensus 94 elV---------------------------------------eiGgsFRi------------------------------ 104 (367)
T PF03841_consen 94 ELV---------------------------------------EIGGSFRI------------------------------ 104 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccc---------------------------------------cccccccc------------------------------
Confidence 221 11122211
Q ss_pred ccccCCCceeeecCchhhHHHHHhhccCCceeeecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCC
Q psy16848 190 LYGEHGAGIGERDGQLHNMDIISGTLVNPEVAIHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVH 269 (514)
Q Consensus 190 ~~~~~~~g~~~~~G~~~~i~~~~~~l~~~~v~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~ 269 (514)
.......|++++.+...+-.. .+.++++++++|++++-.+.+
T Consensus 105 -------------------------------------p~vm~~sGa~lvEVGttN~t~-~~Dye~AI~e~Ta~ll~Vh~S 146 (367)
T PF03841_consen 105 -------------------------------------PDVMRQSGARLVEVGTTNRTH-LSDYEKAITENTAALLKVHTS 146 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------ccccccccccccccccccccc-ccccccccccccccccccccc
Confidence 123344567777776432211 223344557789999887766
Q ss_pred CC--Cccc--cCHHHHHHHHHHcCCEEEEeccccccc----cCCCCCCccccCCCccCceEEEcCCcccccCCC-eEEEe
Q psy16848 270 SM--TGAI--CPLKELCEVSHQHGALTFVDEVHAVGL----YGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG-GYIVG 340 (514)
Q Consensus 270 np--tG~~--~~l~~l~~l~~~~gv~li~Dea~~~g~----~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G-G~l~~ 340 (514)
|. .|.. .+++++.+++++|++++++|-.-+... +|-+..+-. ...+..++|++++|..|.+|++- |++++
T Consensus 147 n~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v-~~~~~~GaDlV~fSGdKlLGGPQaGiI~G 225 (367)
T PF03841_consen 147 NFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTV-QEYLAAGADLVTFSGDKLLGGPQAGIIVG 225 (367)
T ss_dssp --------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------CCCCT-SEEEEETTSSSSS-S-EEEEE
T ss_pred ccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHH-HHHhhcCCCEEEEECCCcCCCCCeEEEEe
Confidence 65 3433 459999999999999999998775211 111111111 11125689999999999997644 99999
Q ss_pred cHHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhh
Q psy16848 341 TKNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILS 377 (514)
Q Consensus 341 ~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 377 (514)
++++++.++.....- .....-..++++.++|+.+.
T Consensus 226 kk~lI~~lk~~pl~R--alrvdK~tla~L~atL~~Y~ 260 (367)
T PF03841_consen 226 KKELIEKLKKHPLGR--ALRVDKLTLAALEATLRLYL 260 (367)
T ss_dssp EHHHHHHHHHHHHTT--T-B--HHHHHHHHHHHHH--
T ss_pred CHHHHHHHhhCCCcc--eEeeCHHHHHHHHHHHHHHH
Confidence 999999998643222 44678888999999998765
No 380
>KOG1383|consensus
Probab=99.20 E-value=3.8e-09 Score=104.30 Aligned_cols=248 Identities=18% Similarity=0.208 Sum_probs=163.0
Q ss_pred chHHHHhhCCCCEEEec--CCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHH-cCCEEEEecccccc
Q psy16848 225 SMIQGIRNSSAPKIIYR--HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQ-HGALTFVDEVHAVG 301 (514)
Q Consensus 225 ~~~~~~~~~g~~~~~v~--~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~-~gv~li~Dea~~~g 301 (514)
.+..+...++.+...++ ..++..+.........++|.+++.+.++.|+|.+-++++|.++.-+ +++.+++|.+-+ |
T Consensus 182 a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~G-g 260 (491)
T KOG1383|consen 182 AFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLG-G 260 (491)
T ss_pred HHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCc-c
Confidence 44455555666666666 4577777777777778889999999999999999999999999999 999999999998 3
Q ss_pred ccCCCC-CCccccCCC-ccCceEEEcCCcc-cccCCC-eEEE-ecHHHHHH-HHh-------hcCceEeccCCcHHHHHH
Q psy16848 302 LYGEHG-AGIGERDGQ-LHNMDIISGTLGK-AFGNIG-GYIV-GTKNFIDT-IRS-------YAAGFIFTTSLPPTVLAG 368 (514)
Q Consensus 302 ~~g~~~-~~~~~~~~~-~~~~di~~~S~sK-~lg~~G-G~l~-~~~~~~~~-l~~-------~~~~~~~~~~~~~~~~~a 368 (514)
+.-+.+ .... .+++ .....-...+.|| ++.+.| ++++ ..+++... +.- ....++...+-+....++
T Consensus 261 Fi~p~~~~~~~-~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~ 339 (491)
T KOG1383|consen 261 FINPAGYLNEE-EFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAA 339 (491)
T ss_pred ccccccccCcc-ccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHH
Confidence 332100 0111 1222 2344455567888 455566 6654 44444321 110 011121222334455666
Q ss_pred HHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccCCCcEEEEEe-C-CCccHHHHHHHHHHhCCeEEecccCC
Q psy16848 369 AREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHTPSHIIPIKI-G-NPALNTKICDMLLKEKGHYVQPINYP 445 (514)
Q Consensus 369 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~i~l-~-~~~~~~~~~~~Ll~~~GI~v~~~~~~ 445 (514)
..+++-.+..++..+..+++.+....+++.+++. ++.++.. +.+.+.+ . ...+--++.+.| .+.|..+....+|
T Consensus 340 ~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk--p~vs~~~~~s~~~~i~elsd~l-~~~GW~lnalq~P 416 (491)
T KOG1383|consen 340 QWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK--PLVSFILFGSNDVNIFELSDLL-RKKGWILNALQFP 416 (491)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC--CcEEEEEccCCccchhhhhHHH-HhcCcCccccCCC
Confidence 6777766667888888899999999999999997 6665544 2223222 2 223345677777 5999988655443
Q ss_pred CCCCCCcEEEEEeCCCCCHHH-HHHHHHHHHHHHHHcCC
Q psy16848 446 TVPVGEEKIRLAPTPFHTREM-IDKFVTDLLAVWKSLDL 483 (514)
Q Consensus 446 ~~~~~~~~iRl~~~~~~t~e~-id~~~~~l~~~l~~~~~ 483 (514)
..+-+++...+..++ .++++.-++++++++..
T Consensus 417 ------~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 417 ------AAIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred ------CceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 256677766666665 68899999999988754
No 381
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.14 E-value=2e-08 Score=95.91 Aligned_cols=259 Identities=15% Similarity=0.155 Sum_probs=161.2
Q ss_pred ChhHHHHHHhhccCCCceEEEEe-cCCCCCccccC---HHHHHHHHHHcCCEEEEecccc-cccc--CC-----CCCCcc
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFE-TVHSMTGAICP---LKELCEVSHQHGALTFVDEVHA-VGLY--GE-----HGAGIG 311 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~-~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~-~g~~--g~-----~~~~~~ 311 (514)
|++.+++.+++...++...|+.. +.|+..|...+ ++++.++|++|++.++.|.+.. ...+ .. ..+++.
T Consensus 170 D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~ 249 (471)
T COG3033 170 DLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIE 249 (471)
T ss_pred CHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHH
Confidence 78999999999887777666544 44556677777 7999999999999999999876 2221 11 111111
Q ss_pred ccCC-CccCceEEEcCCcc-cccCCCeEEEecHH----HHHHHHhhc---CceEeccCCcHHHHHHHHHHHHHhhhchHH
Q psy16848 312 ERDG-QLHNMDIISGTLGK-AFGNIGGYIVGTKN----FIDTIRSYA---AGFIFTTSLPPTVLAGAREAIRILSSQEGV 382 (514)
Q Consensus 312 ~~~~-~~~~~di~~~S~sK-~lg~~GG~l~~~~~----~~~~l~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 382 (514)
++.- ...-+|-++.|.-| .+-..||+++.+.+ +...++... .++.--.+++.-.+.++...|..--+..
T Consensus 250 ~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~-- 327 (471)
T COG3033 250 EIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFD-- 327 (471)
T ss_pred HHHHHHHhhhhhheeeccccceeccccEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcH--
Confidence 1000 01235777778877 34556899987654 444444321 1111011455555666555555332222
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCc-EEEEE-------eC-CCccHHHHHHHHHHhCCeEEecccCCCCCCC---
Q psy16848 383 ELRAKHQDIVAYLRNELIQIGFPVEHTPSH-IIPIK-------IG-NPALNTKICDMLLKEKGHYVQPINYPTVPVG--- 450 (514)
Q Consensus 383 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~i~-------l~-~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~--- 450 (514)
..++..+..+||.+.|.+.|++++.+.|+ -+.+. +| +...++.++..|.++.||.+.....+....+
T Consensus 328 -yl~~Rv~Qv~YL~~~l~~~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~kt 406 (471)
T COG3033 328 -YLAHRVAQVQYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKT 406 (471)
T ss_pred -HHHHHHHHHHHHHHHHHhcCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCc
Confidence 44444556679999999999988766543 22222 12 1234678888888899998864221111111
Q ss_pred -------CcEEEEEeCC-CCCHHHHHHHHHHHHHHHHHcCCccCCcchhhHhHHHHHHHHHHH
Q psy16848 451 -------EEKIRLAPTP-FHTREMIDKFVTDLLAVWKSLDLPLSGLTCAQVNILLFIILFHLI 505 (514)
Q Consensus 451 -------~~~iRl~~~~-~~t~e~id~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (514)
-..+|+.++. ..|.+.+|..++.++++.++-....+.---.+++++++|-|+..+
T Consensus 407 g~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~~~ikgL~~v~ep~llRhFtA~l~p 469 (471)
T COG3033 407 GKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENAEDIKGLEFVYEPKLLRHFTARLEP 469 (471)
T ss_pred cccCCCchheeeEeccccccchhHHHHHHHHHHHHHhccccCCCceeecchhHHHHHHhhccc
Confidence 2589998874 557899999999999998876544443334677778877666543
No 382
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.12 E-value=4.4e-09 Score=103.50 Aligned_cols=227 Identities=16% Similarity=0.148 Sum_probs=121.9
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccC-HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceE
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP-LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDI 322 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~-l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di 322 (514)
|.+..++.+++. .+...+.++++.....+...| +.+|.++|++||++.++..||+.-...--. -+..... ....|+
T Consensus 140 d~~~ie~~i~~~-G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~-~i~~a~~-~GRvda 216 (389)
T PF05889_consen 140 DLEAIEAKIEEL-GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMH-LIQQAWR-VGRVDA 216 (389)
T ss_dssp HHHHHHHHHHHH-CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHH-HHHHHHH-HSTCSE
T ss_pred cHHHHHHHHHHh-CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHH-HHHHHHh-cCCcce
Confidence 345566666544 334577888888888888988 999999999999999999999861100000 0000000 013566
Q ss_pred EEcCCcccc-cCCC-eEEEec-HHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy16848 323 ISGTLGKAF-GNIG-GYIVGT-KNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSSQEGVELRAKHQDIVAYLRNEL 399 (514)
Q Consensus 323 ~~~S~sK~l-g~~G-G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 399 (514)
++.|..|.| -+.| +.+++. +..+..+...-.+- ....|.... ...|..+.............+...++.+.|
T Consensus 217 ~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGR--as~sp~ld~---~itLl~LG~~g~~~ll~~r~~~f~~l~erl 291 (389)
T PF05889_consen 217 FVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGR--ASASPSLDL---FITLLSLGCTGYGALLKERKASFPYLKERL 291 (389)
T ss_dssp EEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSH--BTSHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhh--hhcccchHH---HHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 777888876 2235 444443 56777776543332 112222222 222222323344445555555555555555
Q ss_pred Hh----CCCcccc-CCCc-EEEEEeCC-----CccHHHHHHHHHHhCCeEEecccCCCCCCC--------CcEEEEEeCC
Q psy16848 400 IQ----IGFPVEH-TPSH-IIPIKIGN-----PALNTKICDMLLKEKGHYVQPINYPTVPVG--------EEKIRLAPTP 460 (514)
Q Consensus 400 ~~----~g~~~~~-~~~~-~~~i~l~~-----~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~--------~~~iRl~~~~ 460 (514)
++ .+-.+.. |..+ .+.+.++. ..+...+...|. .+||.-..+..+..+.. -.++-++...
T Consensus 292 ~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf-~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~Asai 370 (389)
T PF05889_consen 292 KKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLF-KRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAI 370 (389)
T ss_dssp HHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHH-HTTEESSEEEETSSCEEETTSS--SSSEEEEEE-T
T ss_pred HHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHH-hCCcccceeeccCCCcccccCCCCchHHHHHHHHh
Confidence 44 3433332 2333 34455542 123567888885 88776433222111111 2688888888
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy16848 461 FHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 461 ~~t~e~id~~~~~l~~~l~ 479 (514)
.+++||+|.++++|+++++
T Consensus 371 G~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 371 GMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp T--HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhC
Confidence 9999999999999999875
No 383
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.03 E-value=9.4e-08 Score=104.52 Aligned_cols=195 Identities=13% Similarity=0.179 Sum_probs=126.7
Q ss_pred CceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEe-ccccccccCCCCCCccccCCCccCceEEEcCCc---ccc--c
Q psy16848 259 IPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVD-EVHAVGLYGEHGAGIGERDGQLHNMDIISGTLG---KAF--G 332 (514)
Q Consensus 259 ~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~D-ea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~s---K~l--g 332 (514)
++..+++.+|+ ..|.+.++++|.++++++|.++++- +.-+++.+.+ .+ ..++||++++.. =.+ |
T Consensus 208 ~~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~~~~d~laL~ll~~--------Pg-e~GADI~vG~~Q~fGvp~~~G 277 (954)
T PRK12566 208 AVFGALLQYPD-THGEIRDLRPLIDQLHGQQALACVAADLLSLLVLTP--------PG-ELGADVVLGSTQRFGVPMGYG 277 (954)
T ss_pred CEEEEEEECCC-CceEEccHHHHHHHHHHcCCEEEEEeCHHHHhCCCC--------hh-hcCCcEEeeCCCcCCCCCCCC
Confidence 47788888884 6699999999999999999986632 2223443322 22 558999987433 222 3
Q ss_pred CCC-eEEEecHHHHHHHHhhcCceE----------e--------------ccC--CcHHHHHHHHHH-HHHhhhchHHHH
Q psy16848 333 NIG-GYIVGTKNFIDTIRSYAAGFI----------F--------------TTS--LPPTVLAGAREA-IRILSSQEGVEL 384 (514)
Q Consensus 333 ~~G-G~l~~~~~~~~~l~~~~~~~~----------~--------------~~~--~~~~~~~a~~~~-l~~~~~~~~~~~ 384 (514)
++. |++.+++++...+.-..-+.+ . +.+ .+...++.+.+. +-++..+++.++
T Consensus 278 GP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~i 357 (954)
T PRK12566 278 GPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRI 357 (954)
T ss_pred CCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 323 999999887766642211111 0 011 112222211111 123345677888
Q ss_pred HHHHHHHHHHHHHHHHhCCCccccCCCcEE---EEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCC
Q psy16848 385 RAKHQDIVAYLRNELIQIGFPVEHTPSHII---PIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPF 461 (514)
Q Consensus 385 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~---~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~ 461 (514)
.++...+..++.+.|.+.|+++... ++| .+.+.. ...++.+... ++||-++.. +++.+.+++.-.
T Consensus 358 a~~~~~~a~~l~~~l~~~g~~~~~~--~fF~~~~v~~~~--~~~~~~~~a~-~~~~n~r~~-------~~~~~~~s~de~ 425 (954)
T PRK12566 358 AQRVHRLTAILAAGLEAKGIKRLNR--HFFDTLTLEVGG--AQAAIIESAE-AARINLRIL-------GRGRLGVSLDET 425 (954)
T ss_pred HHHHHHHHHHHHHHHHhcCCccccC--CccceEEEEccC--CHHHHHHHHH-HCCCeeEEe-------CCCeEEEEeCCC
Confidence 8899999999999999998876543 332 344421 3678888885 899998732 245789999989
Q ss_pred CCHHHHHHHHHHHH
Q psy16848 462 HTREMIDKFVTDLL 475 (514)
Q Consensus 462 ~t~e~id~~~~~l~ 475 (514)
+|.+|++.++..+.
T Consensus 426 ~~~~~~~~~~~~f~ 439 (954)
T PRK12566 426 CDEATVARLFDIFL 439 (954)
T ss_pred CCHHHHHHHHHHhc
Confidence 99999999999884
No 384
>KOG2040|consensus
Probab=98.93 E-value=6e-08 Score=98.91 Aligned_cols=237 Identities=14% Similarity=0.178 Sum_probs=150.9
Q ss_pred hhCCCCEEEec-----CCChhHHHHHHhhccCCCceEEEEecCCCCCccccC-HHHHHHHHHHcCCEEEEeccccccccC
Q psy16848 231 RNSSAPKIIYR-----HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP-LKELCEVSHQHGALTFVDEVHAVGLYG 304 (514)
Q Consensus 231 ~~~g~~~~~v~-----~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~-l~~l~~l~~~~gv~li~Dea~~~g~~g 304 (514)
.++|.+++++. .-|+..+.+..+++. ++.+++.++.|+.. |..-+ ++++.++.++||--+..|.+-.-...|
T Consensus 648 ~MagmkvvpV~~~~~G~id~~dLk~kaekh~-~~Laa~MvTYPST~-GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVG 725 (1001)
T KOG2040|consen 648 AMAGMKVVPVGCDANGNIDMVDLKAKAEKHK-DNLAALMVTYPSTH-GVFEEGIDDICDIIHEHGGQVYLDGANMNAQVG 725 (1001)
T ss_pred HhcCCEEEEeeccCCCCccHHHHHHHHHHhh-hhhheeEEeccccc-ccccccHHHHHHHHHhcCCEEEecCCCccceec
Confidence 34455555555 225555555555442 34678888888655 55544 999999999999999999987633222
Q ss_pred CCCCCccccCCCccCceEEEcCCcccccC------CC-eEEEecHHHHHHHHhhcCc----------e-Eecc--CCcHH
Q psy16848 305 EHGAGIGERDGQLHNMDIISGTLGKAFGN------IG-GYIVGTKNFIDTIRSYAAG----------F-IFTT--SLPPT 364 (514)
Q Consensus 305 ~~~~~~~~~~~~~~~~di~~~S~sK~lg~------~G-G~l~~~~~~~~~l~~~~~~----------~-~~~~--~~~~~ 364 (514)
+.... +.+.|+.--.+||.|+. +| |-+.+.+++...+....-. . +.+. .++..
T Consensus 726 -----lc~pG--d~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ 798 (1001)
T KOG2040|consen 726 -----LCRPG--DIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSAL 798 (1001)
T ss_pred -----ccCCc--cccccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcce
Confidence 22222 33778888899999853 22 5566667776655422100 0 0000 12333
Q ss_pred HHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccCCCc---EEEEEeC-----CCccHHHHHHHHHHhC
Q psy16848 365 VLAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHTPSH---IIPIKIG-----NPALNTKICDMLLKEK 435 (514)
Q Consensus 365 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~---~~~i~l~-----~~~~~~~~~~~Ll~~~ 435 (514)
.+....+-++.+...++...-+...-+++|+.++|+.. .+-+....+. =|.+.+. .+.++.+++++|+ +.
T Consensus 799 ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~-DY 877 (1001)
T KOG2040|consen 799 ILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLM-DY 877 (1001)
T ss_pred eehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhccceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHH-hc
Confidence 33444455555555566666666778889999999987 4444444432 2223322 2456789999996 99
Q ss_pred CeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 436 GHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 436 GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
|+.....++|. .+.+.+-++-..+.+|+|+++++|-.+-+++
T Consensus 878 gFHaPTmswPV----~gtLMIEPTESE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 878 GFHAPTMSWPV----AGTLMIEPTESEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred cCCCCcccccc----CCceEeccCccccHHHHHHHHHHHHHHHHHH
Confidence 99987777754 3478888887788899999999998876654
No 385
>KOG1412|consensus
Probab=98.89 E-value=7.9e-08 Score=90.15 Aligned_cols=219 Identities=13% Similarity=0.129 Sum_probs=136.2
Q ss_pred ChhHHHHHHhhccCCCceEEEEecC-CCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCcc--ccCCCc
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETV-HSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIG--ERDGQL 317 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~-~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~--~~~~~~ 317 (514)
|++-+...|+.+... ..+++..+ +||||.-+. +.+|.+..++.+.+.+.|-+|.-...|...+... .++...
T Consensus 164 d~e~~Lsdl~~APe~--si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~ 241 (410)
T KOG1412|consen 164 DLEGFLSDLESAPEG--SIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQ 241 (410)
T ss_pred cHHHHHHHHhhCCCC--cEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhc
Confidence 556666666665432 34455554 899999887 8999999999999999999998434443322111 111111
Q ss_pred cCceEEEcCCcccccCCC---e---EEEecHHHHHH----HHhhcCceEeccCCcHHHHHHHHHHHHHh--h---hchHH
Q psy16848 318 HNMDIISGTLGKAFGNIG---G---YIVGTKNFIDT----IRSYAAGFIFTTSLPPTVLAGAREAIRIL--S---SQEGV 382 (514)
Q Consensus 318 ~~~di~~~S~sK~lg~~G---G---~l~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~---~~~~~ 382 (514)
...-+++-||+|.+|..+ | +++-++..+.. +....+.. -.++|...+......|+.. . ...+.
T Consensus 242 g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~--~SNPPAyGArIV~kvL~tP~lre~W~~sik 319 (410)
T KOG1412|consen 242 GFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSN--WSNPPAYGARIVHKVLSTPELREQWIQSIK 319 (410)
T ss_pred CCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhc--cCCCcchhhHHHHHHhcCHHHHHHHHHHHH
Confidence 234688999999999855 3 33334444433 33222221 1134444555555555321 1 23456
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCc----cccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEe
Q psy16848 383 ELRAKHQDIVAYLRNELIQIGFP----VEHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAP 458 (514)
Q Consensus 383 ~~~~~~~~~~~~l~~~L~~~g~~----~~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~ 458 (514)
.+..++++++..|++.|..++-+ -+..+.+||.+. .....-++.|.+++.|++.+ .=|+++
T Consensus 320 ~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyT----GLtp~qV~~li~~h~vyLl~-----------~GRIni 384 (410)
T KOG1412|consen 320 TMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYT----GLTPAQVDHLIENHKVYLLS-----------DGRINI 384 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeec----CCCHHHHHHHHHhceEEEec-----------CCcEee
Confidence 77788899999999998887432 233355566654 11334567777788999862 126777
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHcC
Q psy16848 459 TPFHTREMIDKFVTDLLAVWKSLD 482 (514)
Q Consensus 459 ~~~~t~e~id~~~~~l~~~l~~~~ 482 (514)
+ ..+...+|...++|.+.++.+.
T Consensus 385 s-GLN~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 385 S-GLNMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred e-ccccccHHHHHHHHHHHHHhhc
Confidence 6 4667889999999999988764
No 386
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.83 E-value=2.3e-08 Score=95.86 Aligned_cols=263 Identities=14% Similarity=0.069 Sum_probs=147.1
Q ss_pred cccccccCCCceeeecCchhhHHHHHhhccCC--------ceeeecchHHHHh----hCCCC-EEEec-CCChhHHHHHH
Q psy16848 187 AVGLYGEHGAGIGERDGQLHNMDIISGTLVNP--------EVAIHASMIQGIR----NSSAP-KIIYR-HNDVNHLTQVL 252 (514)
Q Consensus 187 ~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~~--------~v~~~~~~~~~~~----~~g~~-~~~v~-~~d~~~l~~~l 252 (514)
.+|.+-..|.-|+.+.|+++.+..++.+|..+ .|+...+|....+ ...-. ...-. ...+.
T Consensus 58 ~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~Gda~~~~------ 131 (363)
T PF04864_consen 58 VVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWAGDASNFK------ 131 (363)
T ss_dssp HH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEEEECCCGT------
T ss_pred HhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccccccHHhhc------
Confidence 57777788889999999999999998887632 3444444433322 22211 11111 11121
Q ss_pred hhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCccccc
Q psy16848 253 ENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFG 332 (514)
Q Consensus 253 ~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg 332 (514)
...+..+-+=++++||||.|.+-. . +++.-+..+|.|-+|.+..+- ++.. ..+-||.++|+||.-|
T Consensus 132 -~~~~~~~~IElVTSPNNPDG~lr~--~---V~~g~~~k~I~D~AYYWPhyT-------pI~~-~aD~DiMLFT~SK~TG 197 (363)
T PF04864_consen 132 -NSDNPSPYIELVTSPNNPDGQLRE--A---VLNGSSGKVIHDLAYYWPHYT-------PITA-PADHDIMLFTLSKLTG 197 (363)
T ss_dssp -T-S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS----------S--B--SEEEEEHHHHCS
T ss_pred -cCCCCCCeEEEEeCCCCCcccccc--h---hcCCCCcceeeeeeeeccccc-------ccCC-CCCCceEEEEEecccC
Confidence 111122345588999999998631 1 224445678999999855431 1221 3467999999999988
Q ss_pred CCC---eEEEec-HHHHHHHHhhcCceEeccCCcHHHHHHHHHHHHHhhh---------chHHHHHHHHHHHHHHHHHHH
Q psy16848 333 NIG---GYIVGT-KNFIDTIRSYAAGFIFTTSLPPTVLAGAREAIRILSS---------QEGVELRAKHQDIVAYLRNEL 399 (514)
Q Consensus 333 ~~G---G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---------~~~~~~~~~~~~~~~~l~~~L 399 (514)
=.| ||.+.+ +++.+.+..+..-. +.+.+.-.+.-+.+.|+.+.+ .-..--++.++++-+.|.+.+
T Consensus 198 HAGSR~GWAlVKD~~Va~kM~~y~~ln--TiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~ 275 (363)
T PF04864_consen 198 HAGSRFGWALVKDEEVAKKMTKYMELN--TIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAV 275 (363)
T ss_dssp -GGG-EEEEEES-HHHHHHHHHHHHHH--CSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccceeeecCHHHHHHHHHHHHHh--cccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHH
Confidence 767 997665 56777766554332 335666666555665554421 112234566678888888888
Q ss_pred HhC-CCcc--c------------cCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCH
Q psy16848 400 IQI-GFPV--E------------HTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTR 464 (514)
Q Consensus 400 ~~~-g~~~--~------------~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~ 464 (514)
..- .+.+ . .+...+-|++..... ..++...| ++.||..+.|..+.. +.+++|+|.- .++
T Consensus 276 ~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee-d~DC~~~l-~~~~I~tr~G~~fga--~~ryVRlSml--~~~ 349 (363)
T PF04864_consen 276 SASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE-DEDCYAVL-REAKIITRSGVLFGA--DSRYVRLSML--KRD 349 (363)
T ss_dssp CCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG-GSSHHHHH-HCTTEEEEEGGGGTS---TTEEEEESS--S-H
T ss_pred HhcCceecCcCCchhccccccccCCCCCeEEEecCCcc-cccHHHHH-HhCCcccCCCCccCC--CCCeEEEecc--CCH
Confidence 664 1111 1 112336677765432 24555556 699999999987543 4789999986 689
Q ss_pred HHHHHHHHHHHHH
Q psy16848 465 EMIDKFVTDLLAV 477 (514)
Q Consensus 465 e~id~~~~~l~~~ 477 (514)
++.+.++++|..+
T Consensus 350 d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 350 DDFDQLLERLSKL 362 (363)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998753
No 387
>KOG3846|consensus
Probab=98.74 E-value=1.7e-06 Score=81.19 Aligned_cols=214 Identities=21% Similarity=0.236 Sum_probs=144.9
Q ss_pred HHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCc
Q psy16848 249 TQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLG 328 (514)
Q Consensus 249 ~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~s 328 (514)
.+.++.. .+..++|++..++..||...++.+|...-+..|.++=.|=+|++|-. +..--+++.|+.+-+-.
T Consensus 205 Ld~IEkn-gDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNV--------pL~LHdWgVDFACWCSY 275 (465)
T KOG3846|consen 205 LDTIEKN-GDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNV--------PLQLHDWGVDFACWCSY 275 (465)
T ss_pred HHHHHhc-CCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCC--------ceEEeecCCceEEEeee
Confidence 3344333 34478899999999999999999999777778999999999997754 22223678999999999
Q ss_pred ccccC-CC---eEEEecHHHHHHHHhhcCceE---------------------ec-cCCcHHHHHHHHHHHHHhhhchHH
Q psy16848 329 KAFGN-IG---GYIVGTKNFIDTIRSYAAGFI---------------------FT-TSLPPTVLAGAREAIRILSSQEGV 382 (514)
Q Consensus 329 K~lg~-~G---G~l~~~~~~~~~l~~~~~~~~---------------------~~-~~~~~~~~~a~~~~l~~~~~~~~~ 382 (514)
|.++. .| |..+-.+..-+...+....|+ |- .++|-....++...|+.+.+-.+.
T Consensus 276 KYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~ 355 (465)
T KOG3846|consen 276 KYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNIN 355 (465)
T ss_pred cccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHH
Confidence 98843 23 555544444433333332221 11 233455668888899988766677
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCc-----------cccC-----CCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCC
Q psy16848 383 ELRAKHQDIVAYLRNELIQI-GFP-----------VEHT-----PSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYP 445 (514)
Q Consensus 383 ~~~~~~~~~~~~l~~~L~~~-g~~-----------~~~~-----~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~ 445 (514)
+++.+..-+..|+...++.. |.. ++.| +|-.+.+.+..+ ...+.+.|. ++|+.+.
T Consensus 356 ~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp--~~~vfqeL~-krGv~~D----- 427 (465)
T KOG3846|consen 356 ELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSP--TPKVFQELH-KRGVIGD----- 427 (465)
T ss_pred HHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCC--chHHHHHHH-HcCeecc-----
Confidence 77776665555555555443 221 1222 233555555543 467889994 9999975
Q ss_pred CCCCCCcEEEEEe-CCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 446 TVPVGEEKIRLAP-TPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 446 ~~~~~~~~iRl~~-~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
.+.++.||+++ +.+++-.|+-.+++.|.+++..+
T Consensus 428 --kR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 428 --KRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred --ccCCCceEeecchhhccHHHHHHHHHHHHHHHHHh
Confidence 45578999977 57889999999999999988765
No 388
>KOG1411|consensus
Probab=98.74 E-value=3.1e-07 Score=87.51 Aligned_cols=217 Identities=14% Similarity=0.077 Sum_probs=128.9
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccC---HHHHHHHHHHcCCEEEEeccccccccCCCCCCc--cccCCCcc
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP---LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGI--GERDGQLH 318 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~---l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~--~~~~~~~~ 318 (514)
|++-+.+.+.+.... ..+++-...|||||.-.. +++|.++.++.+.+-+.|.+|.-...|...... ...+..+.
T Consensus 184 d~~g~ledl~~~p~g-s~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g 262 (427)
T KOG1411|consen 184 DFKGMLEDLGEAPEG-SIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDG 262 (427)
T ss_pred chHHHHHHHhcCCCC-cEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcC
Confidence 455555555555432 234444557899999877 799999999999999999999833333221111 00111123
Q ss_pred CceEEEcCCcccccCCC---eE---EEecHHHHHHHH----hhcCceEeccCCcHHHHHHHHHHHHHh-----hhchHHH
Q psy16848 319 NMDIISGTLGKAFGNIG---GY---IVGTKNFIDTIR----SYAAGFIFTTSLPPTVLAGAREAIRIL-----SSQEGVE 383 (514)
Q Consensus 319 ~~di~~~S~sK~lg~~G---G~---l~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~~~~~~ 383 (514)
...+++-||.|.+|..| |. ++.+++...+++ ...+++ |+ ++|......+...|... ...++..
T Consensus 263 ~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpm-YS-nPP~hGArIv~~Il~d~~l~~~W~~evk~ 340 (427)
T KOG1411|consen 263 HEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPM-YS-NPPLHGARIVATILSDPDLKNQWLGEVKG 340 (427)
T ss_pred CceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhccc-cc-CCCccchhhhhhccCChHHHHHHHHHHHH
Confidence 45678889999999866 33 445566554443 223332 11 22222222223322211 1233566
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcc----ccCCCcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeC
Q psy16848 384 LRAKHQDIVAYLRNELIQIGFPV----EHTPSHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPT 459 (514)
Q Consensus 384 ~~~~~~~~~~~l~~~L~~~g~~~----~~~~~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~ 459 (514)
+.+++..+++.|.+.|+..|-+. +..+-+||.+.- -..+-.+.|.++..|+.+. --|+|.+
T Consensus 341 MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTg----l~peQv~~l~ke~~iYmT~-----------dGRiS~a 405 (427)
T KOG1411|consen 341 MADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTG----LNPEQVDWLTKEYHIYLTK-----------DGRISMA 405 (427)
T ss_pred HHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecC----CCHHHHHHHHhhheeeecc-----------CceEeec
Confidence 78888999999999998874332 334555776642 1345567777888999851 2377776
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q psy16848 460 PFHTREMIDKFVTDLLAVWK 479 (514)
Q Consensus 460 ~~~t~e~id~~~~~l~~~l~ 479 (514)
..+...++.+.++|-++..
T Consensus 406 -G~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 406 -GLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred -cccccCCcccchhhHhHhc
Confidence 4556667777777766543
No 389
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.72 E-value=4.2e-06 Score=81.17 Aligned_cols=200 Identities=15% Similarity=0.124 Sum_probs=136.8
Q ss_pred eEEEEecCCCCCccccC-HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-eEE
Q psy16848 261 KLVAFETVHSMTGAICP-LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG-GYI 338 (514)
Q Consensus 261 ~~vv~~~~~nptG~~~~-l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G-G~l 338 (514)
..|.+++..+-+|.-++ .+.+. . +.++|.|..-.++.. +++ -...|++.++--|.+|+.| +++
T Consensus 146 ayv~~~~NeTi~Gv~v~~~p~~~---~--~~~~v~D~SS~ilsr--------~iD--vsk~dviyagaQKnlGpaGltvv 210 (365)
T COG1932 146 AYVHFCWNETISGVEVPELPDIG---S--DGLLVADASSAILSR--------PID--VSKYDVIYAGAQKNLGPAGLTVV 210 (365)
T ss_pred cEEEEecCCcccceEccCCCCCC---C--CceEEEecccHHhcC--------CCC--hhHcceEEEehhhccCccceEEE
Confidence 34666666666777766 12211 1 178999988875442 222 2367999999999999989 889
Q ss_pred EecHHHHHHHHhhcCc--eEe-------c-c-CCcHHHHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHHhCCCcc
Q psy16848 339 VGTKNFIDTIRSYAAG--FIF-------T-T-SLPPTVLAGAREAIRILSS-QEGVELRAKHQDIVAYLRNELIQIGFPV 406 (514)
Q Consensus 339 ~~~~~~~~~l~~~~~~--~~~-------~-~-~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 406 (514)
+.+++++++++....+ +.+ + . ++|.........+++.+.. -+++.+.++.+++.+.|.+.+.+.++-.
T Consensus 211 Ivr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~ 290 (365)
T COG1932 211 IVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYR 290 (365)
T ss_pred EEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999988764111 100 1 1 3344555666667776654 3578899999999999999998874311
Q ss_pred --cc--CCCc-EEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Q psy16848 407 --EH--TPSH-IIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 407 --~~--~~~~-~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~~ 481 (514)
+. .++. -++|.+.+......|.+.+. ++|+....|+. ..+.+|.++.-.+..|+++.+++.|+++.++.
T Consensus 291 ~~v~~~~RS~mnV~f~~~~~~ld~~fv~eae-~~gl~~lkGhr-----~vgGmRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 291 NLVAKANRSRMNVTFTLVDAELDKGFVAEAE-AAGLIYLKGHR-----SVGGLRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred cccchhhccceeEEEEcCcHHHHHHHHHHHH-HcCCceecccc-----CCCceeeeeecCCCHHHHHHHHHHHHHHHHhh
Confidence 11 1222 34566666666678888884 77777765542 23459999998899999999999999987764
No 390
>KOG0628|consensus
Probab=98.69 E-value=2.6e-06 Score=84.37 Aligned_cols=196 Identities=13% Similarity=0.071 Sum_probs=108.5
Q ss_pred HHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCccCceEEEcCCcccccC----CC-----e-----EEEecH
Q psy16848 278 LKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLHNMDIISGTLGKAFGN----IG-----G-----YIVGTK 342 (514)
Q Consensus 278 l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~~di~~~S~sK~lg~----~G-----G-----~l~~~~ 342 (514)
+.+|..+|+++|+||++|.+|+-.+. .+..+.+ ..| ...+|-+-+..||++-. .. | +.-+++
T Consensus 254 l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l--~rG-ie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp 330 (511)
T KOG0628|consen 254 LEELGPVCREEGLWLHVDAAYAGSAFICPEFRYL--MRG-IEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDP 330 (511)
T ss_pred HHHhcchhhhcCEEEEeehhhccccccCHHHHHH--hhc-chhhccccCChhheeEEeeeeecceeecCceeeeeeecCh
Confidence 99999999999999999999993222 1111111 122 23467888888998643 11 1 112223
Q ss_pred HHHHHHHhh-cCceEeccCCcHHH---HHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhC-CCccccCC-CcEEEE
Q psy16848 343 NFIDTIRSY-AAGFIFTTSLPPTV---LAGAREAIRILSSQEGVELRAKHQDIVAYLRNELIQI-GFPVEHTP-SHIIPI 416 (514)
Q Consensus 343 ~~~~~l~~~-~~~~~~~~~~~~~~---~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~i 416 (514)
-.++.-... ...+.+ ...+-.. ..-..-.++.+..+.+++..++..++++.+.+.+.+- .+++..+. -+++.+
T Consensus 331 ~yL~h~~~~~~~Dyrh-wqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcF 409 (511)
T KOG0628|consen 331 LYLKHAYQGSAPDYRH-WQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCF 409 (511)
T ss_pred HhhcchhhccCCCccc-cccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEE
Confidence 222211111 111100 0111111 1111222333333344444444445555554444433 56655443 346777
Q ss_pred EeCC-CccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCC-CHHHHHHHHHHHHHHHHHc
Q psy16848 417 KIGN-PALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFH-TREMIDKFVTDLLAVWKSL 481 (514)
Q Consensus 417 ~l~~-~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~-t~e~id~~~~~l~~~l~~~ 481 (514)
++.+ +...+.+.+++-....|.+.+... .+.-.+|++++... +.+++++..+.|.+....+
T Consensus 410 Rlk~~N~~ne~Ll~~in~~g~i~l~~~~l----~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 410 RLKGDNEINEALLNRLNSSGRIHLVPASL----HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred eecCCcHHHHHHHHHHHhcCcEEEEEeee----cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence 7753 455678888887666788877654 34668999997644 5578999999998887764
No 391
>KOG0629|consensus
Probab=98.63 E-value=2.4e-06 Score=83.77 Aligned_cols=211 Identities=15% Similarity=0.163 Sum_probs=123.2
Q ss_pred eEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEecccccccc-CCCCCCccccCCCccCceEEEcCCcccccCCC--eE
Q psy16848 261 KLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY-GEHGAGIGERDGQLHNMDIISGTLGKAFGNIG--GY 337 (514)
Q Consensus 261 ~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~-g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G--G~ 337 (514)
-++-.+.....-|..-|+..|+++|++|+.|+++|.+.+-|.+ .+..+. ...+ ...++.|.-+.||.+|.+- +.
T Consensus 255 f~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~--kl~G-iera~SvtwnpHK~~gaplqCsa 331 (510)
T KOG0629|consen 255 FFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRH--KLTG-IERANSVTWNPHKLMGAPLQCSA 331 (510)
T ss_pred eEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHh--hccC-ccccCceeecHHHhhcCcchhhH
Confidence 3444555666779999999999999999999999999995443 222211 2344 3467888889999998733 43
Q ss_pred EEe-cHHHHHHHHhhcCce----------EeccCCcHHHH------HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy16848 338 IVG-TKNFIDTIRSYAAGF----------IFTTSLPPTVL------AGAREAIRILSSQEGVELRAKHQDIVAYLRNELI 400 (514)
Q Consensus 338 l~~-~~~~~~~l~~~~~~~----------~~~~~~~~~~~------~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 400 (514)
.+. .+.++++.......+ +++++--.+.+ .-..-.++.-...+.++..+++.++++|+.+.++
T Consensus 332 ~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lr 411 (510)
T KOG0629|consen 332 FLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLR 411 (510)
T ss_pred HHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH
Confidence 333 344555544332221 12222111111 1122233333345678889999999999999999
Q ss_pred hC-CCccc-cC-CCc-EEEEEe-CC--------C-------ccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeC-
Q psy16848 401 QI-GFPVE-HT-PSH-IIPIKI-GN--------P-------ALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPT- 459 (514)
Q Consensus 401 ~~-g~~~~-~~-~~~-~~~i~l-~~--------~-------~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~- 459 (514)
+. ++..+ .. +.. -+.+.. |. . ..+..+-..++ ++|-.....+.. ...++++|+.++
T Consensus 412 er~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm-~~Gt~Mi~YqPl--~~~~nffr~v~sn 488 (510)
T KOG0629|consen 412 EREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMM-KKGTTMIGYQPL--GDKPNFFRMVISN 488 (510)
T ss_pred hcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHH-hccceeeEeccc--ccccchhheeccc
Confidence 98 33322 21 111 111211 11 0 12234555665 677655432221 122568887664
Q ss_pred CCCCHHHHHHHHHHHHHH
Q psy16848 460 PFHTREMIDKFVTDLLAV 477 (514)
Q Consensus 460 ~~~t~e~id~~~~~l~~~ 477 (514)
...+.+|++.+++.|..+
T Consensus 489 ~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 489 PALTEADLDFLLDEIERL 506 (510)
T ss_pred chhhhhhHHHHHHHHHHh
Confidence 245788999999888764
No 392
>KOG1360|consensus
Probab=98.61 E-value=3.8e-07 Score=88.33 Aligned_cols=83 Identities=67% Similarity=1.165 Sum_probs=78.2
Q ss_pred chHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEeccccccccC
Q psy16848 225 SMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYG 304 (514)
Q Consensus 225 ~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~Dea~~~g~~g 304 (514)
+....++..+++-..+..||.+.+++.|.+.....+|+|.++++++++|.+.|+++|.+++++||++-++||+|+.|.+|
T Consensus 269 SMI~GIrns~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG 348 (570)
T KOG1360|consen 269 SMIQGIRNSRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYG 348 (570)
T ss_pred HHHHHhhhcCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhcccc
Confidence 67888889999999999999999999999998888999999999999999999999999999999999999999999888
Q ss_pred CCC
Q psy16848 305 EHG 307 (514)
Q Consensus 305 ~~~ 307 (514)
..|
T Consensus 349 ~rG 351 (570)
T KOG1360|consen 349 PRG 351 (570)
T ss_pred CCC
Confidence 766
No 393
>PLN02955 8-amino-7-oxononanoate synthase
Probab=97.75 E-value=1.1e-05 Score=83.29 Aligned_cols=67 Identities=30% Similarity=0.543 Sum_probs=57.3
Q ss_pred EEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCchhhHHHHHhhccC
Q psy16848 151 VAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLVN 217 (514)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~ 217 (514)
|++||+|+|+|+++|++++.++++++|+.+++|++|+.|+.|.+|.|+.+..|....+++++.+|-+
T Consensus 253 Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsK 319 (476)
T PLN02955 253 VVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSK 319 (476)
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCcc
Confidence 6789999999999999999999999999999999999999999999987776655555555555543
No 394
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=97.45 E-value=0.0044 Score=62.46 Aligned_cols=188 Identities=15% Similarity=0.116 Sum_probs=128.4
Q ss_pred eeeecccCCCC--CChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC-CC-cEEEEeccccc-cccchh
Q psy16848 19 VTCRLSSVQYK--VPKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ-KE-AGLVFTSCYVA-NDSTLF 93 (514)
Q Consensus 19 ~~~d~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~-~~i~~~sGt~a-~~~~l~ 93 (514)
..+|++++... ..|.+.+++.+.+..+. ++.. ....++++.+++++| .+ ..++..+|+.. +..+++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~~~------rYPd---~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~ 93 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDKLN------RYPD---PDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVR 93 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHhhc------cCCC---CcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHH
Confidence 47888765533 35788888888776421 1111 246789999999998 44 45666677665 666666
Q ss_pred hccccCCCceEEecCccchhhhhhhhcCCCCeeeccCC----ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHH
Q psy16848 94 TLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHN----DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKEL 169 (514)
Q Consensus 94 ~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~----d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (514)
+++. +||.|++..++|...-..++..|++++.++.. |.+.+...+.+ +++++.+.+=---+|.+-+..++
T Consensus 94 ~~~~--~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~----~~~lv~i~nPNNPTG~~~~~~~l 167 (356)
T COG0079 94 AFVE--PGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIRD----KTKLVFLCNPNNPTGTLLPREEL 167 (356)
T ss_pred Hhhc--CCCEEEEcCCChHHHHHHHHhcCCeEEEecccccccCHHHHHHhhhc----CCCEEEEeCCCCCCCCCCCHHHH
Confidence 6665 99999999999999999999999999988774 33444433333 56666664333356999999999
Q ss_pred hhhhhhc--CceEEeeccccccccccCCCceeeecCchhhHHHHHhhcc-CC-ceeeecchHHHHhhCCCCEEE
Q psy16848 170 CEVSHQH--GALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLV-NP-EVAIHASMIQGIRNSSAPKII 239 (514)
Q Consensus 170 ~~~~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~-~~-~v~~~~~~~~~~~~~g~~~~~ 239 (514)
+.+.+.. +..+.+|++...=.. . .. ..++ .+ .+++-.++.+.+.+.|.++=+
T Consensus 168 ~~l~~~~~~~~~vVvDEAY~eF~~---~----------~~-----~~l~~~~~nlivlRTfSKa~gLAGlRlGy 223 (356)
T COG0079 168 RALLEALPEGGLVVIDEAYIEFSP---E----------SS-----LELLKYPPNLIVLRTFSKAFGLAGLRVGY 223 (356)
T ss_pred HHHHHhCCCCcEEEEeCchhhcCC---c----------hh-----hhhccCCCCEEEEEecHHhhhcchhceee
Confidence 9999865 679999997642111 0 00 1111 23 577777888888888887655
No 395
>KOG1357|consensus
Probab=97.38 E-value=0.00013 Score=72.48 Aligned_cols=71 Identities=31% Similarity=0.531 Sum_probs=64.6
Q ss_pred CCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecC-chhhHHHHHhhccC
Q psy16848 147 IPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDG-QLHNMDIISGTLVN 217 (514)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G-~~~~i~~~~~~l~~ 217 (514)
++-+|..+|.|+|+|.++.++++.++++++.+++++|++|+.|..|++|.||++.+| ..+.++++|+++.+
T Consensus 276 kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftK 347 (519)
T KOG1357|consen 276 KKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTK 347 (519)
T ss_pred hheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehh
Confidence 344777889999999999999999999999999999999999999999999999999 66778888888865
No 396
>KOG2040|consensus
Probab=97.20 E-value=0.025 Score=59.07 Aligned_cols=196 Identities=14% Similarity=0.218 Sum_probs=119.3
Q ss_pred ceEEEEecCCCCCccccCHHHHHHHHHHcCCEEEEe-ccccccccCCCCCCccccCCCccCceEEEcCCccc---ccCCC
Q psy16848 260 PKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVD-EVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKA---FGNIG 335 (514)
Q Consensus 260 ~~~vv~~~~~nptG~~~~l~~l~~l~~~~gv~li~D-ea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~---lg~~G 335 (514)
...+++..|. .-|.+.+..++++.+++.|.++++- |-.++-.+- ..+ ..++||+++|.-.. +|-.|
T Consensus 248 v~gvlvQYP~-t~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLr--------pPg-efGaDIavGSsQRFGVPlGYGG 317 (1001)
T KOG2040|consen 248 VSGVLVQYPD-TEGSVLDFDELVELAHANGSLVVMATDLLALTILR--------PPG-EFGADIAVGSSQRFGVPLGYGG 317 (1001)
T ss_pred eeEEEEEcCC-CCCcccCHHHHHHHhhccCceEEEeehhhHHHccC--------Chh-hcCceeeeccccccCccccCCC
Confidence 5567777764 4599999999999999999887753 223222221 122 45789999987653 33323
Q ss_pred ---eEEEecHHHHHHHHhhcCceEec----------------------cCCcHHHHHHHHHHHH-----HhhhchHHHHH
Q psy16848 336 ---GYIVGTKNFIDTIRSYAAGFIFT----------------------TSLPPTVLAGAREAIR-----ILSSQEGVELR 385 (514)
Q Consensus 336 ---G~l~~~~~~~~~l~~~~~~~~~~----------------------~~~~~~~~~a~~~~l~-----~~~~~~~~~~~ 385 (514)
||+.+++.+...+.-..-+.+-+ .+.+-=.+.|+++.+. +...++++++.
T Consensus 318 PHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IA 397 (1001)
T KOG2040|consen 318 PHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIA 397 (1001)
T ss_pred chHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHH
Confidence 66555554443332111111101 0111111222222222 11245678888
Q ss_pred HHHHHHHHHHHHHHHhCCCccccCC-CcEEEEEeCCCccHHHHHHHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCH
Q psy16848 386 AKHQDIVAYLRNELIQIGFPVEHTP-SHIIPIKIGNPALNTKICDMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTR 464 (514)
Q Consensus 386 ~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~i~l~~~~~~~~~~~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~ 464 (514)
+++......|...|+..|.+++... -..+.+++.. ...++.++.. +++|-++-. .++.+-+++--..++
T Consensus 398 rrvh~~T~~l~~~l~~aghel~~k~fFDTLkI~~~~--s~~~~l~rA~-~~~iNlr~~-------ed~tigvslDETv~~ 467 (1001)
T KOG2040|consen 398 RRVHNLTLILAEGLKNAGHELQHKPFFDTLKIRCGC--SAEEVLDRAA-KRQINLRLV-------EDGTIGVSLDETVTE 467 (1001)
T ss_pred HHHHHHHHHHHHHHhhcchhhccccccceEEEEecC--cHHHHHHHHH-hhcCceEEe-------ecCceEEeecccccH
Confidence 8999999999999998876654332 1134466654 4778888885 777777632 245688888888899
Q ss_pred HHHHHHHHHHH
Q psy16848 465 EMIDKFVTDLL 475 (514)
Q Consensus 465 e~id~~~~~l~ 475 (514)
+|++.++..+.
T Consensus 468 ~DvddLl~vf~ 478 (1001)
T KOG2040|consen 468 KDVDDLLWVFN 478 (1001)
T ss_pred HHHHHHHHHHc
Confidence 99999998886
No 397
>KOG2790|consensus
Probab=96.90 E-value=0.13 Score=48.65 Aligned_cols=176 Identities=13% Similarity=0.098 Sum_probs=112.9
Q ss_pred cCCEEEEeccccccccCCCCCCccccCCCccCceEEEcCCcccccCCC-eEEEecHHHHHHHHhhcCce-----------
Q psy16848 288 HGALTFVDEVHAVGLYGEHGAGIGERDGQLHNMDIISGTLGKAFGNIG-GYIVGTKNFIDTIRSYAAGF----------- 355 (514)
Q Consensus 288 ~gv~li~Dea~~~g~~g~~~~~~~~~~~~~~~~di~~~S~sK~lg~~G-G~l~~~~~~~~~l~~~~~~~----------- 355 (514)
+|+++|.|-..-+... +.+. ...++++..--|.+|+.| -.++.+++++..........
T Consensus 174 ~~~vlVaDmSSnflSr--------pvDv--sk~gvi~aGAQKN~G~aG~Tvvivr~dllg~~~~~tP~v~dyk~~~~NnS 243 (370)
T KOG2790|consen 174 KGAVLVADMSSNFLSR--------PVDV--SKFGVIFAGAQKNVGPAGVTVVIVRKDLLGNALDITPSVLDYKIMDKNNS 243 (370)
T ss_pred CCceEEEecccchhcC--------Cccc--hhcceEEeccccccCccccEEEEEehhhhcccccCCccccceeeeccccc
Confidence 5788888877653321 1222 245677778899999988 66777888776554332211
Q ss_pred EeccCCcHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhC-CCccc---cC-CCc-EEEEEeCCCccHHHHH
Q psy16848 356 IFTTSLPPTVLAGAREAIRILSSQ-EGVELRAKHQDIVAYLRNELIQI-GFPVE---HT-PSH-IIPIKIGNPALNTKIC 428 (514)
Q Consensus 356 ~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~-~~~-~~~i~l~~~~~~~~~~ 428 (514)
.|+ ++|...+.++.-.++.+.+. ++.++.+...+....+.+.+.+. |+-.. +. ++- -+.+++.+.....+|.
T Consensus 244 lyN-TpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~Le~eFL 322 (370)
T KOG2790|consen 244 LYN-TPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKDELEAEFL 322 (370)
T ss_pred ccc-CCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecchHHHHHHH
Confidence 011 33445556666667766544 46677777788889999999887 54321 11 121 2446666555566777
Q ss_pred HHHHHhCCeEEecccCCCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Q psy16848 429 DMLLKEKGHYVQPINYPTVPVGEEKIRLAPTPFHTREMIDKFVTDLLAVWKS 480 (514)
Q Consensus 429 ~~Ll~~~GI~v~~~~~~~~~~~~~~iRl~~~~~~t~e~id~~~~~l~~~l~~ 480 (514)
+... ++++.-..|+. .-+.+|-|+--.++-++++++++.|+++.+.
T Consensus 323 keA~-~~~mv~LKGhR-----SVGGiRASlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 323 KEAA-KEHMVQLKGHR-----SVGGIRASLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred HHHH-Hhhhhcccccc-----ccccchhhhhccccHHHHHHHHHHHHHHHHh
Confidence 7775 55655443433 2457899988788999999999999988654
No 398
>KOG3843|consensus
Probab=96.62 E-value=0.027 Score=52.46 Aligned_cols=106 Identities=19% Similarity=0.279 Sum_probs=61.4
Q ss_pred ChhHHHHHHhhccCCCceEEEEecCCCCCccccC-HHHHHHHHHHcCCEEEEeccccccccCCCCCCccccC-C-CccCc
Q psy16848 244 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP-LKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERD-G-QLHNM 320 (514)
Q Consensus 244 d~~~l~~~l~~~~~~~~~~vv~~~~~nptG~~~~-l~~l~~l~~~~gv~li~Dea~~~g~~g~~~~~~~~~~-~-~~~~~ 320 (514)
|++.+++.+++..++ ..+.+....+--.-..++ +++|..+|..|+++-|+..+|++-.... +.... + .-...
T Consensus 142 dleav~~~iee~g~d-cilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~----i~~iaa~~~~gri 216 (432)
T KOG3843|consen 142 DLEAVEAIIEELGED-CILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEEC----IHKIAAAAECGRI 216 (432)
T ss_pred hHHHHHHHHHHhCCc-eEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHH----HHHHHHHhhhccH
Confidence 566667777666543 222232222212223333 9999999999999999999998432100 00000 0 01246
Q ss_pred eEEEcCCcccccC-CCeEEEe--cHHHHHHHHhhcCc
Q psy16848 321 DIISGTLGKAFGN-IGGYIVG--TKNFIDTIRSYAAG 354 (514)
Q Consensus 321 di~~~S~sK~lg~-~GG~l~~--~~~~~~~l~~~~~~ 354 (514)
|.++-|+-|.|-. -||+++. ...+++.+.+...+
T Consensus 217 da~vqsldknf~vpvggaiia~fk~n~iq~iak~ypg 253 (432)
T KOG3843|consen 217 DAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAKMYPG 253 (432)
T ss_pred HHHHHHhhhcceeecchhHhhHhHHHHHHHHHHhCCC
Confidence 7788899998853 4555543 45677777665444
No 399
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=96.61 E-value=0.01 Score=59.40 Aligned_cols=119 Identities=16% Similarity=0.088 Sum_probs=80.4
Q ss_pred HHHHHHHHHHhHcCCCc-EEEEecccc-ccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 61 FHEKLEEDVAKLHQKEA-GLVFTSCYV-ANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 61 ~~~~~~~~la~~~~~~~-~i~~~sGt~-a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
...++++.+++++|.+. .|++++|++ ++..++. +.. +|+ |++..++|......++..|++++.++.++.+...+
T Consensus 41 ~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~--~~~-vv~~~P~y~~y~~~~~~~G~~v~~vp~~~~~~~~~ 116 (332)
T PRK06425 41 SYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YIN--VGN-IIIVEPNFNEYKGYAFTHGIRISALPFNLINNNPE 116 (332)
T ss_pred CHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhC--CCc-EEEeCCChHHHHHHHHHcCCeEEEEeCCcccCcHH
Confidence 36899999999998643 466666665 5555554 444 776 44558999999999999999999877532211123
Q ss_pred HHHhcccCCCcEEEeecccc-ccCCccchhHHhhh---hhhcCceEEeecccc
Q psy16848 139 VLENMDVKIPKLVAFETVHS-MTGAICPLKELCEV---SHQHGALTFVDEVHA 187 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 187 (514)
.+++ .+++++++. ..+ -+|...+..++.++ +++++..+++|+...
T Consensus 117 ~l~~---~~~k~v~l~-nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~ 165 (332)
T PRK06425 117 ILNN---YNFDLIFIV-SPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFI 165 (332)
T ss_pred HHhh---cCCCEEEEe-CCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchh
Confidence 3332 256776665 444 44787786665554 577899999998754
No 400
>PLN02822 serine palmitoyltransferase
Probab=96.33 E-value=0.032 Score=58.90 Aligned_cols=53 Identities=25% Similarity=0.532 Sum_probs=49.1
Q ss_pred CcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceee
Q psy16848 148 PKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGE 200 (514)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~ 200 (514)
.++|++++.|+++|+++|++++.++++++|..+.+|+.|+.|++|.+|.|+.+
T Consensus 246 ~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e 298 (481)
T PLN02822 246 RRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSE 298 (481)
T ss_pred cEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHH
Confidence 37999999999999999999999999999999999999999999988888544
No 401
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=96.02 E-value=0.058 Score=56.01 Aligned_cols=64 Identities=22% Similarity=0.391 Sum_probs=55.2
Q ss_pred eeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchh----HHhhhhhhcCceEEeeccccccc
Q psy16848 125 KIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLK----ELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 125 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
...++++|.+++++.+.+.. .+...|+++.++.+.|++.|.+ .++++|+++|+.+.+|+.| .|.
T Consensus 180 ~~~~~~~d~~~l~~~l~~~~-~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~-tG~ 247 (433)
T PRK00615 180 TLSLPYNDFQIFQTVMNSLG-HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV-TGF 247 (433)
T ss_pred eEeCCCCCHHHHHHHHHhcC-CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc-ccc
Confidence 35567889999999997654 4567899999999999999977 9999999999999999999 466
No 402
>KOG1358|consensus
Probab=95.76 E-value=0.0066 Score=59.61 Aligned_cols=69 Identities=26% Similarity=0.536 Sum_probs=61.5
Q ss_pred CcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeecCch-hhHHHHHhhcc
Q psy16848 148 PKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERDGQL-HNMDIISGTLV 216 (514)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~-~~i~~~~~~l~ 216 (514)
.+.|..+|.|.-+|+++|++++.+++.++...+.+|+..+.|+.|.+|+|+.+-.|.. ..+|++.+++-
T Consensus 234 Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~ 303 (467)
T KOG1358|consen 234 RRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASME 303 (467)
T ss_pred eEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccc
Confidence 4689999999999999999999999999999999999999999999999998887754 66676666654
No 403
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=95.54 E-value=0.2 Score=52.14 Aligned_cols=118 Identities=16% Similarity=0.179 Sum_probs=75.4
Q ss_pred HHHHHHHHhHc----CCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHH
Q psy16848 63 EKLEEDVAKLH----QKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQ 138 (514)
Q Consensus 63 ~~~~~~la~~~----~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~ 138 (514)
.+..=++++.+ |..+.+.+.++.++......++.. .+ .+.. ........+..++.+|.+.+++
T Consensus 147 ~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~---~~-------~~~~---~~~p~~~~~~~~p~~d~~~~~~ 213 (442)
T TIGR03372 147 VEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATA---KP-------AFRK---PFMPLLPGFHHVAFGDIEAMLK 213 (442)
T ss_pred HHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccC---Cc-------ccCC---CCCCCCCCCEEeCCCCHHHHHH
Confidence 44445566654 566677788888875543333321 00 0000 0000112234456668888888
Q ss_pred HHHhc--ccCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeeccccccccccCC
Q psy16848 139 VLENM--DVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHG 195 (514)
Q Consensus 139 ~l~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 195 (514)
.+.+. ...+...++++.++...|...| +++++++|+++|+.+.+|+.+. | .|++|
T Consensus 214 ~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G-~GRtG 274 (442)
T TIGR03372 214 ALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-G-MGRTG 274 (442)
T ss_pred HHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-C-CCccc
Confidence 88642 2245678889999999999999 8999999999999999999983 5 44444
No 404
>PRK09064 5-aminolevulinate synthase; Validated
Probab=95.47 E-value=0.0073 Score=62.38 Aligned_cols=50 Identities=56% Similarity=1.075 Sum_probs=46.5
Q ss_pred CcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCc
Q psy16848 148 PKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAG 197 (514)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 197 (514)
+++|+++++|.++|++.|+.++.++++++|+.+.+|++|+.|..|+.|.|
T Consensus 179 ~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g 228 (407)
T PRK09064 179 PKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGG 228 (407)
T ss_pred CeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCC
Confidence 57899999999999999999999999999999999999999988877766
No 405
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=95.41 E-value=0.12 Score=53.19 Aligned_cols=104 Identities=22% Similarity=0.270 Sum_probs=69.9
Q ss_pred CCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEe
Q psy16848 74 QKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAF 153 (514)
Q Consensus 74 ~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~ 153 (514)
+..+.+.+.++.++.......+.. ... +. .........+..++++|.+++++.+. .+.+.|++
T Consensus 123 ~r~~ii~~~~~yHG~~~~~~~~~~----~~~------~~---~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~aavi~ 185 (397)
T TIGR03246 123 DKSEIVAFKNSFHGRTLFTVSVGG----QPK------YS---QGFAPLPGGIKHAPYNDLAAAKALIS----DKTCAVIV 185 (397)
T ss_pred CCCEEEEECCCcCCccHHHHHhcC----Ccc------cc---cCCCCCCCceEEeCCCCHHHHHHHhc----cCeEEEEE
Confidence 556678788888885433222221 100 00 00011122456678889999998885 34678999
Q ss_pred eccccccC----CccchhHHhhhhhhcCceEEeeccccccccccCCC
Q psy16848 154 ETVHSMTG----AICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGA 196 (514)
Q Consensus 154 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 196 (514)
+..+.+.| +...+.+++++|+++|+.+.+|+.| .|. |..|.
T Consensus 186 Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~-Gr~G~ 230 (397)
T TIGR03246 186 EPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGV-GRTGE 230 (397)
T ss_pred ecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcC-Ccccc
Confidence 99998888 4566899999999999999999999 677 55554
No 406
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=95.39 E-value=0.0093 Score=61.49 Aligned_cols=51 Identities=59% Similarity=1.131 Sum_probs=47.0
Q ss_pred CcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCce
Q psy16848 148 PKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGI 198 (514)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 198 (514)
+++|++++.+.++|.+.|.+++.++++++|+.+.+|++|+.|++|+.|.|+
T Consensus 178 ~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~ 228 (402)
T TIGR01821 178 PKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGI 228 (402)
T ss_pred CeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCcc
Confidence 478899999999999999999999999999999999999999988877664
No 407
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=95.28 E-value=0.023 Score=58.30 Aligned_cols=57 Identities=26% Similarity=0.416 Sum_probs=50.4
Q ss_pred CCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceeeec
Q psy16848 146 KIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGERD 202 (514)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 202 (514)
.++++|++++.+.++|.+.|+++++++++++|..+.+|+.|+.|..|.+|.|..+.+
T Consensus 137 ~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~ 193 (392)
T PLN03227 137 DQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHA 193 (392)
T ss_pred CCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHc
Confidence 457899999999999999999999999999999999999999998888777754433
No 408
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=95.18 E-value=0.011 Score=61.17 Aligned_cols=51 Identities=65% Similarity=1.186 Sum_probs=47.1
Q ss_pred CcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCce
Q psy16848 148 PKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGI 198 (514)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 198 (514)
+++|+++++++++|.+.|.+++.++++++|+.+.+|+.|+.|++|+.|.|.
T Consensus 178 ~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~ 228 (406)
T PRK13393 178 PKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI 228 (406)
T ss_pred CEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCch
Confidence 468899999999999999999999999999999999999999998877764
No 409
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=94.80 E-value=0.34 Score=49.82 Aligned_cols=102 Identities=20% Similarity=0.247 Sum_probs=68.4
Q ss_pred HHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCC
Q psy16848 69 VAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIP 148 (514)
Q Consensus 69 la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 148 (514)
++...|.++.+.+..+.++.......+. |.... .......+.++..++++|.+.+++.+. .+.
T Consensus 122 ~~~~~g~~~ii~~~~~yhg~~~~~~~~~----~~~~~---------~~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~ 184 (398)
T PRK03244 122 LARLTGRTKIVAAEGGFHGRTMGALALT----GQPAK---------RAPFEPLPGGVEHVPYGDVDALAAAVD----DDT 184 (398)
T ss_pred HHHHHCCCeEEEECCCcCCccHHHHhcc----CCccc---------ccCCCCCCCCceEeCCCCHHHHHHhhc----CCe
Confidence 3344676677777667776543332221 11100 001111234556677778999988773 356
Q ss_pred cEEEeeccccccCCccc----hhHHhhhhhhcCceEEeecccc
Q psy16848 149 KLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 149 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
+.++++..+..+|...| +.++.++++++|+.+.+|+.+.
T Consensus 185 ~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~ 227 (398)
T PRK03244 185 AAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT 227 (398)
T ss_pred EEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 88888999888899888 7799999999999999999885
No 410
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=94.72 E-value=0.37 Score=50.50 Aligned_cols=69 Identities=23% Similarity=0.384 Sum_probs=54.1
Q ss_pred eeccCCChHHHHHHHHhcc--cCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeeccccccccccCCC
Q psy16848 126 IIYRHNDVNHLTQVLENMD--VKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGA 196 (514)
Q Consensus 126 ~~~~~~d~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 196 (514)
..++.+|.+++++.+.+.. ..+...++++.++.+.|.+.| +..++++|+++|+.+.+|+.|. | .|++|.
T Consensus 208 ~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G-~GRtG~ 282 (459)
T PRK11522 208 RHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-G-MGRTGK 282 (459)
T ss_pred cccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-c-CCccch
Confidence 3455668889998887532 234568899999999999998 8899999999999999999984 5 355443
No 411
>PLN02483 serine palmitoyltransferase
Probab=94.71 E-value=0.018 Score=60.86 Aligned_cols=53 Identities=34% Similarity=0.642 Sum_probs=47.5
Q ss_pred CcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCceee
Q psy16848 148 PKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGIGE 200 (514)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~ 200 (514)
+.+|+++++|+++|++++++++.++++++|+.+++|++|+.|..|.+|.|+.+
T Consensus 241 k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~ 293 (489)
T PLN02483 241 KIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCE 293 (489)
T ss_pred eEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHH
Confidence 34888999999999999999999999999999999999999888887777443
No 412
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=94.38 E-value=0.039 Score=48.36 Aligned_cols=56 Identities=18% Similarity=0.293 Sum_probs=41.0
Q ss_pred ccCcchHHHHHHHHHHhHcC--C---CcEEEEec-cccccccchhhccccCCCceEEecCccch
Q psy16848 55 ISGNSLFHEKLEEDVAKLHQ--K---EAGLVFTS-CYVANDSTLFTLGKMIPGLHYISDAGNHA 112 (514)
Q Consensus 55 ~~~~~~~~~~~~~~la~~~~--~---~~~i~~~s-Gt~a~~~~l~~l~~~~~gd~v~~~~~~h~ 112 (514)
..|..++.+++.+.+.+.+| . +..|++++ +++++..++.+++. |||.|+++.++|.
T Consensus 91 ~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~d--pGD~VlVp~P~Y~ 152 (153)
T PLN02994 91 YHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIAD--PGDAFLVPTPYYA 152 (153)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcC--CCCEEEEeCCCCC
Confidence 34667888888888888766 1 12344555 55677888888876 9999999999885
No 413
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=94.24 E-value=0.025 Score=58.42 Aligned_cols=52 Identities=58% Similarity=1.052 Sum_probs=47.4
Q ss_pred CCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCce
Q psy16848 147 IPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGI 198 (514)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 198 (514)
++++|++++.+.++|.+.|+.++.++++++|+.+.+|++|+.|..|..|.|+
T Consensus 178 ~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~ 229 (410)
T PRK13392 178 RPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGI 229 (410)
T ss_pred CCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCch
Confidence 5689999999999999999999999999999999999999999888766663
No 414
>KOG1359|consensus
Probab=94.13 E-value=0.037 Score=52.40 Aligned_cols=32 Identities=44% Similarity=0.753 Sum_probs=24.8
Q ss_pred ccccccccCCCceeeecCchhhHHHHHhhccC
Q psy16848 186 HAVGLYGEHGAGIGERDGQLHNMDIISGTLVN 217 (514)
Q Consensus 186 ~~~g~~~~~~~g~~~~~G~~~~i~~~~~~l~~ 217 (514)
|++|..|.+|.|..+..|.-+.+++.-.+|-+
T Consensus 232 HaTgf~G~tGrGt~E~~~vm~~vdiinsTLgK 263 (417)
T KOG1359|consen 232 HATGFFGETGRGTAEEFGVMGDVDIINSTLGK 263 (417)
T ss_pred ccceeecCCCCChHHHhCCCCcceehhhhhhh
Confidence 57899999999999888876666666666644
No 415
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=93.94 E-value=0.4 Score=49.40 Aligned_cols=99 Identities=23% Similarity=0.332 Sum_probs=67.9
Q ss_pred CCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEe
Q psy16848 74 QKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAF 153 (514)
Q Consensus 74 ~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~ 153 (514)
+....+++..+.++.......+.. . .....++......+..++++|.+++++.+. .+.+.|++
T Consensus 128 ~~~~ii~~~~~~HG~~~~~~~~~~----~---------~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~aaiii 190 (403)
T PRK05093 128 EKTEIIAFHNSFHGRTLFTVSVGG----Q---------PKYSDGFGPKPADITHVPFNDLAAVKAVID----DHTCAVVV 190 (403)
T ss_pred CCCeEEEEcCCcCCchhhhHhhcC----C---------hhhhhcCCCCCCCcEEeCCCCHHHHHHHhc----CCeEEEEE
Confidence 355677778788875432222211 1 001112222334567788889999998884 35788999
Q ss_pred eccccccCCccc----hhHHhhhhhhcCceEEeeccccccc
Q psy16848 154 ETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 154 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
+.++++.|...| +.+++++|+++|..+.+|+.+. |.
T Consensus 191 ep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~ 230 (403)
T PRK05093 191 EPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GM 230 (403)
T ss_pred ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CC
Confidence 999988887655 8899999999999999999987 53
No 416
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=93.66 E-value=0.12 Score=52.55 Aligned_cols=69 Identities=23% Similarity=0.300 Sum_probs=57.4
Q ss_pred hcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 119 RNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 119 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
+..|.++..++.+|++++++.+.. ++++|.++..+..+|.+.+.+++.++++++|+.+.+|+.|+.++.
T Consensus 101 ~~~g~~~~~v~~~d~~~l~~~i~~----~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~ 169 (369)
T cd00614 101 PKLGIEVTFVDPDDPEALEAAIKP----ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL 169 (369)
T ss_pred hhcCeEEEEeCCCCHHHHHHhcCC----CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc
Confidence 344666777777788888877743 578999999888899999999999999999999999999887654
No 417
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=93.64 E-value=0.67 Score=48.75 Aligned_cols=116 Identities=22% Similarity=0.355 Sum_probs=74.6
Q ss_pred HHHHh-HcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhccc
Q psy16848 67 EDVAK-LHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDV 145 (514)
Q Consensus 67 ~~la~-~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 145 (514)
-++++ +.|.++.+.+.++.++....+.+... .+.. ....+....+. ......+..++++|.+++++.+.+..
T Consensus 172 lklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~--~~~~-~~~~~~~~g~~---~~~~~~~~~~~~nd~~~l~~~l~~~~- 244 (474)
T PLN02482 172 LRLARAYTGREKIIKFEGCYHGHADSFLVKAG--SGVA-TLGLPDSPGVP---KAATSATLTAPYNDLEAVKKLFEANK- 244 (474)
T ss_pred HHHHHHhcCCCEEEEECCccCCCcchhhhhcC--CCcc-ccCCCCCCCCC---CCCCCCeEEecCCChHHHHHHHHhCC-
Confidence 34444 45788888888888885433222211 1100 00000000000 01112456678889999999997643
Q ss_pred CCCcEEEeeccccccCCccchh----HHhhhhhhcCceEEeeccccccc
Q psy16848 146 KIPKLVAFETVHSMTGAICPLK----ELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
.....|+++.++.+.|.+.|.+ .++++|+++|+.+.+|+.| .|.
T Consensus 245 ~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGf 292 (474)
T PLN02482 245 GEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM-TGF 292 (474)
T ss_pred CceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCe
Confidence 4567889999999999998866 6999999999999999998 566
No 418
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=93.42 E-value=0.53 Score=47.82 Aligned_cols=61 Identities=41% Similarity=0.561 Sum_probs=42.5
Q ss_pred ecchHHHHhhCCCCEEEecCCChhHHHHHHhhccCC--CceEEEEecCCCCCccccCHHHHHHHHH
Q psy16848 223 HASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVK--IPKLVAFETVHSMTGAICPLKELCEVSH 286 (514)
Q Consensus 223 ~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~--~~~~vv~~~~~nptG~~~~l~~l~~l~~ 286 (514)
|.+....+++.+++.+.+.++|++.+++.+++.... +.++|+++.+.++.| ++..|.+++.
T Consensus 133 HASiidG~rls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdG---diApL~~l~~ 195 (388)
T COG0156 133 HASIIDGIRLSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDG---DIAPLPELVE 195 (388)
T ss_pred hhhHHHHHHhCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCC---CcCCHHHHHH
Confidence 337789999999999999999999999999884321 345566665554433 3444444444
No 419
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=93.29 E-value=1.2 Score=46.50 Aligned_cols=55 Identities=31% Similarity=0.462 Sum_probs=47.8
Q ss_pred hHHHHHHHHhcccCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeecccc
Q psy16848 133 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 133 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
.++|++.+......+...|+++.++.+.|.+.| +..++++|+++|+.+.+|+.|.
T Consensus 201 ~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~t 259 (442)
T PRK13360 201 ADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVIT 259 (442)
T ss_pred HHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 457888887655556778999999999999999 9999999999999999999984
No 420
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=92.89 E-value=1.7 Score=45.41 Aligned_cols=55 Identities=27% Similarity=0.446 Sum_probs=47.2
Q ss_pred hHHHHHHHHhcccCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeecccc
Q psy16848 133 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 133 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
.+++++.+.+....+...++++.++...|.+.| +.+++++|+++|+.+.+|+.+.
T Consensus 204 ~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~t 262 (445)
T PRK09221 204 ADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVIT 262 (445)
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh
Confidence 357778887655556778999999999999999 9999999999999999999885
No 421
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=92.87 E-value=0.22 Score=51.34 Aligned_cols=74 Identities=19% Similarity=0.248 Sum_probs=60.7
Q ss_pred hhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccc
Q psy16848 115 IQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYG 192 (514)
Q Consensus 115 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 192 (514)
...++..|.+++.++..|++++++.+.. +.++|.++.....+|.+.+..++.++++++|+.+.+|.+++.+...
T Consensus 127 ~~~~~~~G~~v~~vd~~d~~~l~~ai~~----~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~ 200 (403)
T PRK07810 127 NEILPRWGVETVFVDGEDLSQWEEALSV----PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQ 200 (403)
T ss_pred HHHHHHcCcEEEEECCCCHHHHHHhcCc----CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccC
Confidence 3344556777777777788989888753 4688999988888999999999999999999999999998876553
No 422
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=92.76 E-value=0.11 Score=52.79 Aligned_cols=50 Identities=32% Similarity=0.624 Sum_probs=45.3
Q ss_pred cEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCce
Q psy16848 149 KLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAGI 198 (514)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 198 (514)
++|+++++++++|.+.|.+++.++++++|+.+.+|++|+.|..+..+.|.
T Consensus 145 ~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~ 194 (370)
T PRK05937 145 IFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGF 194 (370)
T ss_pred EEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCch
Confidence 46778999999999999999999999999999999999999888777653
No 423
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=92.46 E-value=0.76 Score=47.26 Aligned_cols=132 Identities=23% Similarity=0.318 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHhCCCCC-C-cCcccCcchHHHHHHHHHHhHcCCCcEEEEecc-ccccccchhhccccCCCceEEecCcc
Q psy16848 34 GRKCLGEALEKFGTGAG-G-TRNISGNSLFHEKLEEDVAKLHQKEAGLVFTSC-YVANDSTLFTLGKMIPGLHYISDAGN 110 (514)
Q Consensus 34 ~~~a~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~la~~~~~~~~i~~~sG-t~a~~~~l~~l~~~~~gd~v~~~~~~ 110 (514)
..++.++.+.++-...+ . -.+..++.+....+...+...+...+.|+++.. .++|......+.+
T Consensus 67 ~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~------------- 133 (405)
T COG0520 67 LYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAK------------- 133 (405)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHH-------------
Confidence 44445555554433221 1 123344555555555555543333344555544 3467666655553
Q ss_pred chhhhhhhhcCCCCeeeccCC-----ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecc
Q psy16848 111 HASMIQGIRNSSAPKIIYRHN-----DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEV 185 (514)
Q Consensus 111 h~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (514)
..|+++++++.+ +.++++. ..+.++|++.++.+...+|..-|..++.++++++|+.++||-+
T Consensus 134 ---------~~Ga~v~~i~~~~~g~~~~~~~~~----~i~~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaa 200 (405)
T COG0520 134 ---------RTGAKVRVIPLDDDGLLDLDALEK----LITPKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAA 200 (405)
T ss_pred ---------hcCcEEEEEecCCCCCcCHHHHHH----hcCCCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECc
Confidence 334555555432 3344444 5667889999999999999999999999999999999999998
Q ss_pred cccccc
Q psy16848 186 HAVGLY 191 (514)
Q Consensus 186 ~~~g~~ 191 (514)
|+.|..
T Consensus 201 q~~~h~ 206 (405)
T COG0520 201 QAAGHL 206 (405)
T ss_pred cccCcc
Confidence 887643
No 424
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=92.42 E-value=1.6 Score=45.26 Aligned_cols=164 Identities=19% Similarity=0.091 Sum_probs=113.7
Q ss_pred CCceeeecccCC---CCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC-CCcEEEEeccccccc
Q psy16848 16 SNRVTCRLSSVQ---YKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ-KEAGLVFTSCYVAND 89 (514)
Q Consensus 16 ~g~~~~d~~~~~---~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~i~~~sGt~a~~ 89 (514)
+|++|+|+.+.- -+| ||++.+++.+++.+. ..+ ....+...++++++++++. .++++|++||++|++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~-~~~------~~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e 118 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERG-TSY------GAPTEAEILLAKEIISRVPSVEMVRFVNSGTEATM 118 (423)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhC-CcC------CCCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHH
Confidence 566666664332 122 799999999999872 211 1124567889999999874 457888999999999
Q ss_pred cchhhccccCCCceEEecCc-cchhhhhhhhc--C-----------------CCCeeeccCCChHHHHHHHHhcccCCCc
Q psy16848 90 STLFTLGKMIPGLHYISDAG-NHASMIQGIRN--S-----------------SAPKIIYRHNDVNHLTQVLENMDVKIPK 149 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~~~-~h~~~~~~~~~--~-----------------~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 149 (514)
.+++......+++.|+.-.+ +|......+.. . ......++++|++++++.+.+.. .+.+
T Consensus 119 ~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-~~~a 197 (423)
T TIGR00713 119 SAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYG-EEIA 197 (423)
T ss_pred HHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcC-CcEE
Confidence 99986443223455555444 55433222210 0 11234566779999999997542 4567
Q ss_pred EEEeeccccccCCccc----hhHHhhhhhhcCceEEeecccc
Q psy16848 150 LVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 150 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
.++++.+++.+|.+.| +.+++++++++|..+.+|+.+.
T Consensus 198 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~ 239 (423)
T TIGR00713 198 GVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMT 239 (423)
T ss_pred EEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc
Confidence 8899989988888887 5789999999999999999883
No 425
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=92.07 E-value=1.6 Score=44.94 Aligned_cols=60 Identities=15% Similarity=0.250 Sum_probs=51.6
Q ss_pred CeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeecccc
Q psy16848 124 PKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 124 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
.+..++++|.+.+++.+. .+.+.|+++..+..+|...| +..++++|+++|+.+.+|+.+.
T Consensus 168 ~~~~~~~~d~~~le~~i~----~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~ 231 (401)
T PRK00854 168 GFRVVPFGDAEALEAAIT----PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT 231 (401)
T ss_pred CeEEeCCCCHHHHHHHhC----CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 455678889999998874 35689999999988898887 8999999999999999999996
No 426
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=91.80 E-value=1.9 Score=44.98 Aligned_cols=65 Identities=31% Similarity=0.482 Sum_probs=52.5
Q ss_pred CChHHHHHHHHhc-ccCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeeccccccccccCCCc
Q psy16848 131 NDVNHLTQVLENM-DVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAG 197 (514)
Q Consensus 131 ~d~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 197 (514)
++.+++++.+.+. ...+...++++.++.+.|.+.| +..++++|+++|+.+.+|+.|. | .|.+|.+
T Consensus 190 ~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G-~gr~G~~ 259 (433)
T PRK08117 190 ECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-G-FGRTGEW 259 (433)
T ss_pred HHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-c-cCccccc
Confidence 3567788888753 2345678999999999999999 9999999999999999999998 6 4555543
No 427
>PRK05939 hypothetical protein; Provisional
Probab=91.42 E-value=0.41 Score=49.18 Aligned_cols=69 Identities=16% Similarity=0.249 Sum_probs=55.5
Q ss_pred hhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccc
Q psy16848 117 GIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVG 189 (514)
Q Consensus 117 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (514)
.++..|.+++.++..|.+++++.+. .++++|.++.....+|.+.+..++.++++++|+.+.+|..++.+
T Consensus 105 ~l~~~G~~v~~v~~~d~e~l~~~l~----~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~ 173 (397)
T PRK05939 105 TLRGLGVEVTMVDATDVQNVAAAIR----PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSP 173 (397)
T ss_pred HHHhcCCEEEEECCCCHHHHHHhCC----CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccc
Confidence 3444566677777678888887774 46788989877778899999999999999999999999987655
No 428
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=91.20 E-value=0.38 Score=48.54 Aligned_cols=56 Identities=34% Similarity=0.505 Sum_probs=48.3
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
|++++++.+. .+++++.+......+|.+.|..++.++++++|+.+.+|..|+.|..
T Consensus 127 d~~~l~~~l~----~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~ 182 (353)
T TIGR03235 127 DVDELADAIR----PDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKI 182 (353)
T ss_pred CHHHHHHhCC----CCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCc
Confidence 6777877764 3568999998888999999999999999999999999999987754
No 429
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=91.16 E-value=0.46 Score=48.75 Aligned_cols=70 Identities=17% Similarity=0.213 Sum_probs=56.6
Q ss_pred hcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccc
Q psy16848 119 RNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYG 192 (514)
Q Consensus 119 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 192 (514)
+..|.++..++..|++++++.+. .++++|.++.....+|.+.+..++.++++++|+.+.+|++++.+..+
T Consensus 120 ~~~G~~~~~vd~~d~e~l~~~i~----~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~ 189 (391)
T TIGR01328 120 TKFGIQVDFINMAIPEEVKAHIK----DNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLT 189 (391)
T ss_pred hcCCeEEEEECCCCHHHHHHhhc----cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccC
Confidence 44566666666667888877764 35689999988888999999999999999999999999998876543
No 430
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=91.08 E-value=1.2 Score=45.65 Aligned_cols=63 Identities=30% Similarity=0.493 Sum_probs=51.8
Q ss_pred cCCChHHHHHHHHhcccCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeeccccccccccCCCc
Q psy16848 129 RHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHGAG 197 (514)
Q Consensus 129 ~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 197 (514)
+.+|.+++++.+. .+...++++.++.+.|.+.| +.+++++|+++|..+.+|+.+. | .|++|.+
T Consensus 165 ~~~d~~~l~~~l~----~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G-~GRtG~~ 231 (395)
T PRK03715 165 ELNDIASVEKLIT----DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-G-CGRTGTL 231 (395)
T ss_pred CCchHHHHHHHcC----CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCCCcch
Confidence 3467888888774 24678999999999999988 8999999999999999999988 6 4665543
No 431
>PRK07179 hypothetical protein; Provisional
Probab=90.90 E-value=0.12 Score=53.24 Aligned_cols=47 Identities=36% Similarity=0.733 Sum_probs=41.5
Q ss_pred EEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCc
Q psy16848 151 VAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAG 197 (514)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 197 (514)
|++++.+..+|.+.|+.++.++++++|+.+.+|+.|+.|..|..|.|
T Consensus 185 V~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g 231 (407)
T PRK07179 185 IVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAG 231 (407)
T ss_pred EEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCc
Confidence 55677888899999999999999999999999999998887776655
No 432
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=90.69 E-value=0.65 Score=47.87 Aligned_cols=59 Identities=22% Similarity=0.312 Sum_probs=51.1
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
+++++++.+... ..+.+++.++++...+|.+.|.+++.++++++|+.+++|..|+.|..
T Consensus 157 ~~~~l~~~~~~~-~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~ 215 (406)
T TIGR01814 157 RLEDILDTIEKN-GDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNV 215 (406)
T ss_pred CHHHHHHHHHhc-CCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCc
Confidence 677887777643 34678999999999999999999999999999999999999998754
No 433
>PRK06234 methionine gamma-lyase; Provisional
Probab=90.53 E-value=0.6 Score=48.09 Aligned_cols=72 Identities=18% Similarity=0.302 Sum_probs=58.5
Q ss_pred hhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhc--CceEEeeccccccccc
Q psy16848 117 GIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQH--GALTFVDEVHAVGLYG 192 (514)
Q Consensus 117 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~ 192 (514)
.++..|.+++.++..|++++++.+.. ++++|.++.....+|.+.+..++.++++++ |+.+++|+.++.+..+
T Consensus 123 ~~~~~G~~v~~vd~~d~e~l~~~i~~----~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~ 196 (400)
T PRK06234 123 GLTRYGVEVTFVDTSNLEEVRNALKA----NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQ 196 (400)
T ss_pred HHhhCCeEEEEECCCCHHHHHHHhcc----CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcC
Confidence 34556777777777788888887743 568899998888889999999999999997 8999999998877544
No 434
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=90.50 E-value=1.1 Score=46.60 Aligned_cols=116 Identities=22% Similarity=0.338 Sum_probs=74.2
Q ss_pred HHHHHHHhH-cCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhh-cCCCCeeeccCCChHHHHHHHH
Q psy16848 64 KLEEDVAKL-HQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIR-NSSAPKIIYRHNDVNHLTQVLE 141 (514)
Q Consensus 64 ~~~~~la~~-~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~-~~~~~~~~~~~~d~~~l~~~l~ 141 (514)
+..-++++. .|..+.+.+.+|.++......++.. .+ ..-...+... ++. .....+..++++|.+.+++.+.
T Consensus 123 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~--~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~d~~~l~~~l~ 195 (428)
T PRK12389 123 MTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAG--SG-PSTLGTPDSA----GVPKSIAQEVITVPFNDIEALKEALD 195 (428)
T ss_pred HHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcC--Cc-ccccCCCCCC----CCCCcccCceEEcCCCCHHHHHHHHH
Confidence 333344444 5777788888888885433322221 00 0000000000 111 1123456677889999999997
Q ss_pred hcccCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeecccc
Q psy16848 142 NMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
+.. .....++++.++...|.+.| +.+++++|+++|+.+.+|+.+.
T Consensus 196 ~~~-~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~t 244 (428)
T PRK12389 196 KWG-DEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT 244 (428)
T ss_pred hcC-CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 654 44678889999988899998 8899999999999999999875
No 435
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=90.07 E-value=0.45 Score=49.54 Aligned_cols=166 Identities=15% Similarity=0.023 Sum_probs=113.6
Q ss_pred CCceeeecccCC---CCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHc-CCCcEEEEeccccccc
Q psy16848 16 SNRVTCRLSSVQ---YKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLH-QKEAGLVFTSCYVAND 89 (514)
Q Consensus 16 ~g~~~~d~~~~~---~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-~~~~~i~~~sGt~a~~ 89 (514)
+|+.|+||.+.- .+| ||++.+++.+|+++.. .. ........++.+++++++ +.++++|++|||+|++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~-~~------~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e 118 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC-NF------TRPSAIELDAAESFLELIDGADMVKFCKNGSDATS 118 (431)
T ss_pred CCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCc-CC------CCCCHHHHHHHHHHHHhCCccceEEEecCHHHHHH
Confidence 666777774432 233 8999999999999732 11 112344457888888887 3567899999999999
Q ss_pred cchhhccccCCCceEEec--Ccc-------chhhhhhhhc---CCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccc
Q psy16848 90 STLFTLGKMIPGLHYISD--AGN-------HASMIQGIRN---SSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVH 157 (514)
Q Consensus 90 ~~l~~l~~~~~gd~v~~~--~~~-------h~~~~~~~~~---~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~ 157 (514)
.|++..........|+.- ... |......... ....+..++++|++++++.+.+.. .+...|+++.++
T Consensus 119 ~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~aavi~Epv~ 197 (431)
T PRK06209 119 AAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRYNDIASLEALFEDHP-GRIACVILEPAT 197 (431)
T ss_pred HHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCCCCHHHHHHHHHhCC-CCEEEEEEcccc
Confidence 999865432223344432 222 2211100000 011245678899999999997643 356788899999
Q ss_pred cccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 158 SMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
.+.++...+++++++++++|+.+.+|+.| .|.
T Consensus 198 g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~ 229 (431)
T PRK06209 198 ADEPQDGFLHEVRRLCHENGALFILDEMI-TGF 229 (431)
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccC
Confidence 88888888999999999999999999998 666
No 436
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=90.04 E-value=0.68 Score=47.48 Aligned_cols=70 Identities=19% Similarity=0.232 Sum_probs=56.6
Q ss_pred hhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 118 IRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 118 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
++..|.+++.++..|.+++++.+. .++++|.++.....+|.+.+..++.++++++|..+.+|+.++.+..
T Consensus 121 ~~~~G~~v~~vd~~d~~~l~~~i~----~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~ 190 (390)
T PRK08133 121 FARFGIETTFVDLTDLDAWRAAVR----PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPAL 190 (390)
T ss_pred HHHcCcEEEEECCCCHHHHHHhcC----cCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 345567777777778888887774 3568888888777889999999999999999999999998876543
No 437
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=90.02 E-value=0.58 Score=47.76 Aligned_cols=68 Identities=22% Similarity=0.308 Sum_probs=55.8
Q ss_pred cCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 120 NSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 120 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
..|.+++.++..|++++++.+. .++++|.+++....+|.+.+..++.++++++|+.+.+|.+++.+..
T Consensus 108 ~~G~~v~~vd~~d~~~le~~i~----~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~ 175 (378)
T TIGR01329 108 RSGVVVVHVDTTDLDKVKAALG----PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL 175 (378)
T ss_pred HcCcEEEEeCCCCHHHHHHhcC----cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc
Confidence 4466666666668888887774 4678999999888899999999999999999999999998866543
No 438
>PRK07503 methionine gamma-lyase; Provisional
Probab=89.68 E-value=0.66 Score=47.81 Aligned_cols=69 Identities=17% Similarity=0.201 Sum_probs=55.3
Q ss_pred hcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 119 RNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 119 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
+..|.++..++..|++.+++.+.. ++++|+++.....+|.+.+..++.++++++|..+.+|..++.+..
T Consensus 126 ~~~G~~v~~vd~~d~~~l~~~i~~----~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~ 194 (403)
T PRK07503 126 GEFGVTVRHVDLTDPAALKAAISD----KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYL 194 (403)
T ss_pred hhCCEEEEEeCCCCHHHHHHhcCc----cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 345666666666678888877743 578888887777889999999999999999999999999886644
No 439
>PRK06062 hypothetical protein; Provisional
Probab=89.57 E-value=3.6 Score=43.08 Aligned_cols=167 Identities=17% Similarity=0.109 Sum_probs=119.9
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|++|+||.+. ..++ ||+|.+++.+++++...... . -..+...++.++++++.. .++++|++||++|+
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~--~---~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAv 125 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP--A---HANDARSEAARLIAERAPGDLSKVFFTNGGADAN 125 (451)
T ss_pred CCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC--c---cCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHH
Confidence 56666666432 2223 79999999999998433211 1 124677889999999874 46789999999999
Q ss_pred ccchhhccc-cCCCceEEecCccchhhhhhhhcCCCCe-----------ee--ccC---------CC-------hHHHHH
Q psy16848 89 DSTLFTLGK-MIPGLHYISDAGNHASMIQGIRNSSAPK-----------II--YRH---------ND-------VNHLTQ 138 (514)
Q Consensus 89 ~~~l~~l~~-~~~gd~v~~~~~~h~~~~~~~~~~~~~~-----------~~--~~~---------~d-------~~~l~~ 138 (514)
+.|++.... +++...|.....+|.....++...+... .. ++. +| .++|++
T Consensus 126 e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~ 205 (451)
T PRK06062 126 EHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLER 205 (451)
T ss_pred HHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHH
Confidence 999986543 3445566777788888877766543211 11 010 22 466777
Q ss_pred HHHhcccCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeecccc
Q psy16848 139 VLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
.|......+...|+++.++...|.+.| +..++++|+++|+.+.+|+.+.
T Consensus 206 ~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~t 258 (451)
T PRK06062 206 VIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMA 258 (451)
T ss_pred HHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecccc
Confidence 776544456678999999999999999 9999999999999999999886
No 440
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=88.60 E-value=0.26 Score=50.55 Aligned_cols=50 Identities=44% Similarity=0.813 Sum_probs=44.7
Q ss_pred CcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCCCc
Q psy16848 148 PKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHGAG 197 (514)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 197 (514)
+++|.+++++..+|.+.|..++.++++++|..+.+|+.|+.|..+..+.+
T Consensus 171 ~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~ 220 (393)
T TIGR01822 171 HRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRG 220 (393)
T ss_pred ceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCc
Confidence 46888999999999999999999999999999999999998887765544
No 441
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=88.53 E-value=1 Score=46.15 Aligned_cols=54 Identities=31% Similarity=0.460 Sum_probs=46.3
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVG 189 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (514)
|.+++++.+. .+++++.+.+....+|...|..++.++++.+|+.+.+|..|..|
T Consensus 145 ~~~~l~~~i~----~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~ 198 (397)
T TIGR01976 145 HPDDLASLLS----PRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAP 198 (397)
T ss_pred CHHHHHHhcC----CCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhcc
Confidence 5677777663 35789999999999999999999999999999999999988654
No 442
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=87.56 E-value=5.1 Score=41.56 Aligned_cols=101 Identities=17% Similarity=0.220 Sum_probs=60.8
Q ss_pred CCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCC-----hHHHHHHHHhcccCCC
Q psy16848 74 QKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHND-----VNHLTQVLENMDVKIP 148 (514)
Q Consensus 74 ~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d-----~~~l~~~l~~~~~~~~ 148 (514)
+..+.+.+.+|.++......++.. .+ .|.+....+ ..+...+.++++| .+.+++.+.+.. ...
T Consensus 133 ~r~~ii~~~~~yHG~t~~~ls~~~--~~--------~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~-~~i 200 (423)
T PRK05964 133 GRSRFLSLRGGYHGDTIGTMSVGD--RG--------GMHALYTPL-LFEQVTAPFPPDGYEQATLDALEALLEKHA-GEI 200 (423)
T ss_pred CCcEEEEEcCCcCCccHHHHhcCC--Cc--------cccccccCc-CCCCEEeCCCcchhHHHHHHHHHHHHHhCC-CcE
Confidence 456678888888885433333321 11 111111111 1123445666666 778888887543 344
Q ss_pred cEEEeecccccc-C----CccchhHHhhhhhhcCceEEeeccc
Q psy16848 149 KLVAFETVHSMT-G----AICPLKELCEVSHQHGALTFVDEVH 186 (514)
Q Consensus 149 ~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (514)
..++++..+... | +...+.++.++|+++|+.+.+|+.|
T Consensus 201 aavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~ 243 (423)
T PRK05964 201 AAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIA 243 (423)
T ss_pred EEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 566777654433 3 3344888999999999999999998
No 443
>PRK14012 cysteine desulfurase; Provisional
Probab=87.52 E-value=4.4 Score=41.67 Aligned_cols=56 Identities=23% Similarity=0.382 Sum_probs=47.7
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
|++++++.+. .+++++.+......+|.+.|..++.++++++|+.+.+|.+|+.|..
T Consensus 133 d~~~l~~~i~----~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~ 188 (404)
T PRK14012 133 DLEKLEAAMR----DDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKV 188 (404)
T ss_pred CHHHHHHhcC----CCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCc
Confidence 6788887774 3467888888887889999999999999999999999999987644
No 444
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=87.45 E-value=1.6 Score=44.23 Aligned_cols=84 Identities=10% Similarity=0.161 Sum_probs=60.0
Q ss_pred CCceEEecCccchhh----hhhhhcCCCCeeeccC---CChHHHHHHHHhcccCCCcEEEe-eccccccCCccchhHHhh
Q psy16848 100 PGLHYISDAGNHASM----IQGIRNSSAPKIIYRH---NDVNHLTQVLENMDVKIPKLVAF-ETVHSMTGAICPLKELCE 171 (514)
Q Consensus 100 ~gd~v~~~~~~h~~~----~~~~~~~~~~~~~~~~---~d~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 171 (514)
+|+.|+++.+.+... ...+...|++++.+.. .|++++++.+.. +++.+++ ......+|.+.+..++.+
T Consensus 98 ~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~----~t~ai~~v~~~~~~~g~~~~~~~i~~ 173 (363)
T TIGR01437 98 EVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITE----KTAAILYIKSHHCVQKSMLSVEDAAQ 173 (363)
T ss_pred ccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcCh----hceEEEEEecCCCCcCCcCCHHHHHH
Confidence 788999987544432 3566778888887642 478888887742 3454443 221123577889999999
Q ss_pred hhhhcCceEEeecccc
Q psy16848 172 VSHQHGALTFVDEVHA 187 (514)
Q Consensus 172 ~~~~~~~~~~~~~~~~ 187 (514)
+++++|..+.+|.+|+
T Consensus 174 ~a~~~gi~vivD~a~~ 189 (363)
T TIGR01437 174 VAQEHNLPLIVDAAAE 189 (363)
T ss_pred HHHHcCCeEEEECCCC
Confidence 9999999999999875
No 445
>PRK02948 cysteine desulfurase; Provisional
Probab=87.44 E-value=0.91 Score=46.28 Aligned_cols=56 Identities=20% Similarity=0.258 Sum_probs=47.8
Q ss_pred CChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 131 NDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 131 ~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
.|.+++++.+. .+++++.+.+....+|.+.|..++.++++++|..+.+|..|+.|.
T Consensus 126 ~d~~~l~~~l~----~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~ 181 (381)
T PRK02948 126 IRLVDLERAIT----PDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGK 181 (381)
T ss_pred CCHHHHHHhcC----CCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccc
Confidence 36778877764 346899999999999999999999999999999999998887764
No 446
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=87.35 E-value=15 Score=37.20 Aligned_cols=107 Identities=21% Similarity=0.244 Sum_probs=61.1
Q ss_pred HHHHHHHHhHcC----CCcEEEEeccccc-cccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHH
Q psy16848 63 EKLEEDVAKLHQ----KEAGLVFTSCYVA-NDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLT 137 (514)
Q Consensus 63 ~~~~~~la~~~~----~~~~i~~~sGt~a-~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~ 137 (514)
.|.+=++|+.+. +.+.+.+.++-|+ .+.++.+-.+ | .| .+...-.-..+..++-+|.++++
T Consensus 113 ~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~--~---------ky---~~~F~Pl~~g~~~vpfnDi~al~ 178 (404)
T COG4992 113 NEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQ--P---------KY---RKGFGPLLPGFRHVPFNDIEALE 178 (404)
T ss_pred HHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCC--h---------hh---ccCCCCCCCCceecCCCCHHHHH
Confidence 344445666554 3356777787777 4555533322 1 01 11111111234456778999999
Q ss_pred HHHHhcccCCCcEEEee---ccc-cccCCccchhHHhhhhhhcCceEEeecccc
Q psy16848 138 QVLENMDVKIPKLVAFE---TVH-SMTGAICPLKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 138 ~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
+++.+ ....|+.+ |.. -.+.+..-+..++++|+++|+.+.+|+.+.
T Consensus 179 ~ai~~----~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQt 228 (404)
T COG4992 179 AAIDE----DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQT 228 (404)
T ss_pred HHhcc----CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecccc
Confidence 99987 22233332 111 122333446778999999999999999764
No 447
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=87.32 E-value=1 Score=46.89 Aligned_cols=66 Identities=17% Similarity=0.175 Sum_probs=50.7
Q ss_pred CCCeeecc-CCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 122 SAPKIIYR-HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 122 ~~~~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
|.+++.+. ..|.+.+++.+. .+.++|+++.....+|.+.+..++.++++++|+.+.+|..|+.++.
T Consensus 133 Gi~v~~vdd~~d~e~l~~ai~----~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~ 199 (436)
T PRK07812 133 GIEVSFVEDPDDLDAWRAAVR----PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL 199 (436)
T ss_pred eEEEEEECCCCCHHHHHHhCC----CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 44444442 235666665543 3568999999999999999999999999999999999998876543
No 448
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=86.85 E-value=1.7 Score=43.83 Aligned_cols=57 Identities=26% Similarity=0.399 Sum_probs=45.8
Q ss_pred CChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 131 NDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 131 ~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
.|.+++++.+.. .+++++.+......+|.+.|..++.++++++|..+++|..|+.|.
T Consensus 111 ~~~~~l~~~i~~---~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~ 167 (356)
T cd06451 111 VSPEEIAEALEQ---HDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGG 167 (356)
T ss_pred CCHHHHHHHHhc---cCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccC
Confidence 378888888864 256777776654568999999999999999999999999887653
No 449
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=86.75 E-value=1.2 Score=46.13 Aligned_cols=69 Identities=19% Similarity=0.262 Sum_probs=53.7
Q ss_pred hhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 118 IRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 118 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
++..|.+++.++..|++++++.+.. ++++|.++.....+|.+.+..++.++++++|+.+.+|+.++.|.
T Consensus 117 ~~~~G~~v~~v~~~d~~~l~~~l~~----~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~ 185 (418)
T TIGR01326 117 LKRLGIEVRFVDPDDPEEFEKAIDE----NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPY 185 (418)
T ss_pred HHHcCcEEEEECCCCHHHHHHhcCc----CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhh
Confidence 3445666666666688888877743 46788887766667889999999999999999999999887553
No 450
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=86.61 E-value=1.4 Score=45.03 Aligned_cols=68 Identities=26% Similarity=0.303 Sum_probs=53.5
Q ss_pred hcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 119 RNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 119 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
+..|.++..++..|++++++.+. .++++|+++......|.+.+..++.++++++|..+.+|+.++.+.
T Consensus 115 ~~~g~~v~~v~~~d~~~l~~~i~----~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~ 182 (380)
T TIGR01325 115 PRFGIEVSFVDPTDLNAWEAAVK----PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPV 182 (380)
T ss_pred HHhCCEEEEECCCCHHHHHHhcC----CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 34455666666667788777663 356888888777778999999999999999999999999887554
No 451
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=86.59 E-value=1.5 Score=45.39 Aligned_cols=55 Identities=33% Similarity=0.514 Sum_probs=47.4
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
|.+++++.+. .+++++.+......+|.+.|..++.++++++|+.+++|..|+.|.
T Consensus 162 ~~~~l~~~i~----~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~ 216 (424)
T PLN02855 162 DVEQLKELLS----EKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPH 216 (424)
T ss_pred CHHHHHHHhc----cCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCC
Confidence 6777777774 267899999888889999999999999999999999999987664
No 452
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=86.58 E-value=5.3 Score=41.04 Aligned_cols=56 Identities=21% Similarity=0.339 Sum_probs=47.6
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
|++++++.+. .+++++.+......+|...|..++.++++++|+.+.+|..|+.|..
T Consensus 131 d~~~l~~~l~----~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~ 186 (402)
T TIGR02006 131 DLEELKAAIR----DDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKI 186 (402)
T ss_pred CHHHHHHhcC----CCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCc
Confidence 6777777664 3467888888888899999999999999999999999999987754
No 453
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=86.46 E-value=0.84 Score=45.99 Aligned_cols=47 Identities=19% Similarity=0.253 Sum_probs=38.1
Q ss_pred CcEEEeeccccccCCc---cchhHHhhhhhhcCceEEeeccccccccccCC
Q psy16848 148 PKLVAFETVHSMTGAI---CPLKELCEVSHQHGALTFVDEVHAVGLYGEHG 195 (514)
Q Consensus 148 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 195 (514)
+++|+++| ++++|++ +++.++.++++++|+.+++|++|+.|+.+..+
T Consensus 137 ~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~ 186 (346)
T TIGR03576 137 TSLVVITG-STMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYG 186 (346)
T ss_pred ceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCC
Confidence 45666676 5899998 67888888899999999999999988765433
No 454
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=86.34 E-value=11 Score=38.31 Aligned_cols=149 Identities=25% Similarity=0.228 Sum_probs=89.7
Q ss_pred ChhHHHHHHHHHHH----hCCCCCCcCcccCcchHHHHHHHHHHhHcCC-CcEEEEeccccccccchhhccccCCCceEE
Q psy16848 31 PKGGRKCLGEALEK----FGTGAGGTRNISGNSLFHEKLEEDVAKLHQK-EAGLVFTSCYVANDSTLFTLGKMIPGLHYI 105 (514)
Q Consensus 31 ~~~~~~a~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~ 105 (514)
.|++.+.+.+..+. +++.........|. -.-.+|..+..++.. ++++++.+|.=+...+=.+-.. ..+...
T Consensus 33 s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gs--Gt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~~--g~~v~~ 108 (383)
T COG0075 33 SPDFVGIMKEVLEKLRKVFGTENGDVVLLSGS--GTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAERY--GAEVVV 108 (383)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCC--cHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHHh--CCceEE
Confidence 36666555555543 44332222333333 345778888888864 5788888887654332211111 233333
Q ss_pred ecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecc
Q psy16848 106 SDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEV 185 (514)
Q Consensus 106 ~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (514)
++.. + -...|++++++.|.+.+ ..+.+.+-++=-.+|-+-|..++..+++++|+.+.||-.
T Consensus 109 ~~~~-w----------------g~~v~p~~v~~~L~~~~--~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaV 169 (383)
T COG0075 109 LEVE-W----------------GEAVDPEEVEEALDKDP--DIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAV 169 (383)
T ss_pred EeCC-C----------------CCCCCHHHHHHHHhcCC--CccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEec
Confidence 2221 1 12338999999998433 345666655545679999999999999999999999976
Q ss_pred ccccccc--cCCCceeeec
Q psy16848 186 HAVGLYG--EHGAGIGERD 202 (514)
Q Consensus 186 ~~~g~~~--~~~~g~~~~~ 202 (514)
-+.|--- ...+||+...
T Consensus 170 sS~Gg~~~~vd~wgiDv~i 188 (383)
T COG0075 170 SSLGGEPLKVDEWGIDVAI 188 (383)
T ss_pred ccCCCcccchhhcCccEEE
Confidence 6665332 3446655443
No 455
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=86.19 E-value=1.7 Score=44.14 Aligned_cols=55 Identities=35% Similarity=0.579 Sum_probs=46.8
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
|++++++.+.+ +++++++......+|...|..++.++++++|..+.+|.+|+.|.
T Consensus 128 d~~~l~~~l~~----~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~ 182 (373)
T cd06453 128 DLEALEKLLTE----RTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGH 182 (373)
T ss_pred CHHHHHHHhcC----CceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCc
Confidence 77888887754 57888888777788999999999999999999999999887554
No 456
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=86.03 E-value=4.1 Score=41.30 Aligned_cols=57 Identities=30% Similarity=0.512 Sum_probs=49.5
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYG 192 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 192 (514)
|.+++++.|. .+++++.+..+...+|...|.+++.++++++|+.+.+|-.|+.|..-
T Consensus 128 ~~~~~~~~l~----~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~ 184 (371)
T PF00266_consen 128 DLEDLEEALN----PDTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVP 184 (371)
T ss_dssp SHHHHHHHHH----TTESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS
T ss_pred hhhhhhhhhc----cccceEEeecccccccEEeeeceehhhhhccCCceeEechhcccccc
Confidence 6788888883 67899999999999999999999999999999999999998887653
No 457
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=85.99 E-value=1.9 Score=43.81 Aligned_cols=56 Identities=20% Similarity=0.480 Sum_probs=47.7
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
|.+++++.+. .+++++.+......+|.+.|..++.++++++|..+.+|.+|+.|..
T Consensus 126 d~~~l~~~~~----~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~ 181 (376)
T TIGR01977 126 SPERIKRAIK----TNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVI 181 (376)
T ss_pred CHHHHHHhcC----CCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCcc
Confidence 6777777663 3578888888777899999999999999999999999999988754
No 458
>PRK06460 hypothetical protein; Provisional
Probab=85.69 E-value=2 Score=43.88 Aligned_cols=69 Identities=16% Similarity=0.172 Sum_probs=51.0
Q ss_pred hhhcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccc
Q psy16848 117 GIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVG 189 (514)
Q Consensus 117 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (514)
.++..|.++..++.++.+.+++. ...+++++.++.....+|.+.+..++.++++++|..+.+|+.++.+
T Consensus 104 ~~~~~G~~v~~~~~~~~~~l~~~----~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~ 172 (376)
T PRK06460 104 YLKNWGVNVDASNPGSDNIIEKA----KSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTP 172 (376)
T ss_pred HHHhhCcEEEEECCCCHHHHHHh----cCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcc
Confidence 34455666666655444444332 2346788999888888899999999999999999999999987644
No 459
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=85.62 E-value=2 Score=44.10 Aligned_cols=55 Identities=22% Similarity=0.371 Sum_probs=46.8
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
|.+++++.+. .+++++.+..+...+|.+.|..++.++++++|+.+++|..|+.|.
T Consensus 149 d~~~l~~~i~----~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~ 203 (401)
T PRK10874 149 DVDLLPELIT----PRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVH 203 (401)
T ss_pred CHHHHHHhcC----cCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCccccc
Confidence 5677777663 357889999888899999999999999999999999999887654
No 460
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=84.53 E-value=2.4 Score=43.54 Aligned_cols=55 Identities=25% Similarity=0.405 Sum_probs=46.3
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
|.+++++.+. .+++++.+.+....+|...|..++.++++++|+.+++|..|+.|.
T Consensus 146 ~~~~l~~~i~----~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~ 200 (398)
T TIGR03392 146 DIRQLPELLT----PRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVH 200 (398)
T ss_pred CHHHHHHHhc----cCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCC
Confidence 5677777663 356888888888889999999999999999999999999887653
No 461
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=84.34 E-value=2.3 Score=43.64 Aligned_cols=55 Identities=35% Similarity=0.570 Sum_probs=46.7
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
|.+++++.+. .+++++.+..+...+|...|..++.++++++|..+.+|.+|+.|.
T Consensus 148 ~~~~l~~~i~----~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~ 202 (403)
T TIGR01979 148 DLDDLEKLLT----EKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPH 202 (403)
T ss_pred CHHHHHHHhc----cCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCc
Confidence 5677776663 367889999888889999999999999999999999999887653
No 462
>PRK06541 hypothetical protein; Provisional
Probab=84.05 E-value=16 Score=38.38 Aligned_cols=56 Identities=23% Similarity=0.339 Sum_probs=46.5
Q ss_pred HHHHHHHHhcccCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeeccc-ccc
Q psy16848 134 NHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVH-AVG 189 (514)
Q Consensus 134 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~g 189 (514)
+.+++.+.+........++++.++...|.+.| +..++++|+++|+.+.+|+.+ ..|
T Consensus 208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfG 268 (460)
T PRK06541 208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFG 268 (460)
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 56777776544456778889999988899999 999999999999999999988 444
No 463
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=83.83 E-value=2.2 Score=44.32 Aligned_cols=67 Identities=16% Similarity=0.259 Sum_probs=52.4
Q ss_pred hcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccc
Q psy16848 119 RNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVG 189 (514)
Q Consensus 119 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 189 (514)
+..|.+++.++..|++++++.+.. ++++|.++....-+|.+.+..++.++++++|+.+.+|..++.+
T Consensus 125 ~~~Gv~v~~vd~~d~e~l~~ai~~----~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~ 191 (431)
T PRK08248 125 PKLGITVKFVDPSDPENFEAAITD----KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASP 191 (431)
T ss_pred HhCCEEEEEECCCCHHHHHHhcCC----CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcc
Confidence 445666666666688888877743 4678888755556799999999999999999999999987644
No 464
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=83.68 E-value=11 Score=39.23 Aligned_cols=174 Identities=16% Similarity=0.116 Sum_probs=117.3
Q ss_pred CCceeeecccCCC---CC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC---CCcEEEEeccccc
Q psy16848 16 SNRVTCRLSSVQY---KV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ---KEAGLVFTSCYVA 87 (514)
Q Consensus 16 ~g~~~~d~~~~~~---~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~~~i~~~sGt~a 87 (514)
+|++|+|+.+.-+ +| ||++.+++.+++++...... ..+ ..+...++.+++++.+. .++++|++||++|
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-~~~---~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA 127 (441)
T PRK05769 52 DGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSL-TDF---YYEPAVELAERLVEIAPGGFEKKVFFTNSGTES 127 (441)
T ss_pred CCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccC-ccc---CCHHHHHHHHHHHHhCCCCCCCEEEECCchHHH
Confidence 5667777744322 23 79999999999997432211 111 24667889999999874 3678889999999
Q ss_pred cccchhhccc-cCCCceEEecCccchhhhhhhhcCCCC-------------eeeccC----------CCh--------HH
Q psy16848 88 NDSTLFTLGK-MIPGLHYISDAGNHASMIQGIRNSSAP-------------KIIYRH----------NDV--------NH 135 (514)
Q Consensus 88 ~~~~l~~l~~-~~~gd~v~~~~~~h~~~~~~~~~~~~~-------------~~~~~~----------~d~--------~~ 135 (514)
++.|++.... .++...|.....+|.....++...+.. +...+. .+. +.
T Consensus 128 ~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (441)
T PRK05769 128 NEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDF 207 (441)
T ss_pred HHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHH
Confidence 9999976543 334445666777888877666544321 111111 111 22
Q ss_pred HHH-HHHh-cccCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeeccccccccccCC
Q psy16848 136 LTQ-VLEN-MDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHAVGLYGEHG 195 (514)
Q Consensus 136 l~~-~l~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 195 (514)
+++ .+.+ ....+...|+++.++.+.|.+.| ++.++++|+++|..+.+|+.+. | .|..|
T Consensus 208 le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G-~gr~G 271 (441)
T PRK05769 208 IEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-G-MGRTG 271 (441)
T ss_pred HHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCccc
Confidence 444 2222 13456788999999999999999 9999999999999999999987 4 34444
No 465
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=83.49 E-value=2.2 Score=43.99 Aligned_cols=55 Identities=31% Similarity=0.505 Sum_probs=46.7
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
|.+++++.+. .+++++.+......+|...|..++.++++++|+.+.+|..|+.|.
T Consensus 153 d~~~l~~~i~----~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~ 207 (406)
T PRK09295 153 QLETLPALFD----ERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMH 207 (406)
T ss_pred CHHHHHHhcC----CCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCc
Confidence 6677777663 357889998888889999999999999999999999999987764
No 466
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=83.39 E-value=6.5 Score=40.81 Aligned_cols=168 Identities=15% Similarity=0.095 Sum_probs=113.9
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHc----CCC-cEEEE-ecc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLH----QKE-AGLVF-TSC 84 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~i~~-~sG 84 (514)
+|++|+||.+. ..+| ||++.+++.+|+++.+..... ....+...++.+++++.+ +.+ .++|+ +||
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~----~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG 112 (425)
T PRK09264 37 DGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGL----DMHTTAKREFLETFEETILKPRGLDYKVQFTGPTG 112 (425)
T ss_pred CCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccccccc----ccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCH
Confidence 56667776432 2223 899999999999975443221 112466778888888864 233 34554 799
Q ss_pred ccccccchhhccc-cCCCceEEecCccchhhhhhhhcCCC------------CeeeccC--------CChHHHHHHHHhc
Q psy16848 85 YVANDSTLFTLGK-MIPGLHYISDAGNHASMIQGIRNSSA------------PKIIYRH--------NDVNHLTQVLENM 143 (514)
Q Consensus 85 t~a~~~~l~~l~~-~~~gd~v~~~~~~h~~~~~~~~~~~~------------~~~~~~~--------~d~~~l~~~l~~~ 143 (514)
++|++.|++.... .++...|.....+|.....++...+. .+..++. +|.+++++.+.+.
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~ 192 (425)
T PRK09264 113 TNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDS 192 (425)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhc
Confidence 9999999986543 33444566777888887766655431 1122222 3667888888765
Q ss_pred cc--CCCcEEEeeccccccCCcc----chhHHhhhhhhcCceEEeecccc
Q psy16848 144 DV--KIPKLVAFETVHSMTGAIC----PLKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 144 ~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
.. .+...++++.++...|... .+..++++|+++|..+.+|+.|.
T Consensus 193 ~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t 242 (425)
T PRK09264 193 SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA 242 (425)
T ss_pred cCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh
Confidence 43 2456888999888776533 57889999999999999999886
No 467
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=83.39 E-value=8.1 Score=39.25 Aligned_cols=55 Identities=33% Similarity=0.509 Sum_probs=46.5
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
|.+++++.+. .+++++.+......+|...|..++.++++++|..+.+|..|+.|.
T Consensus 125 ~~~~l~~~i~----~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~ 179 (379)
T TIGR03402 125 DLEELRAAIT----DDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGK 179 (379)
T ss_pred CHHHHHHhcC----CCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccc
Confidence 6788887774 356788888887788999999999999999999999999888763
No 468
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=82.93 E-value=2.6 Score=42.91 Aligned_cols=165 Identities=14% Similarity=0.129 Sum_probs=109.4
Q ss_pred eeecccCCCCCChhHHHHHHHHHHHhCCCCCCcCcccCc--chHHHHHHHHHHhHcCC---CcEEEEeccccccccchhh
Q psy16848 20 TCRLSSVQYKVPKGGRKCLGEALEKFGTGAGGTRNISGN--SLFHEKLEEDVAKLHQK---EAGLVFTSCYVANDSTLFT 94 (514)
Q Consensus 20 ~~d~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~la~~~~~---~~~i~~~sGt~a~~~~l~~ 94 (514)
|.|.++..+ .++.+.+++.+.++.+..+++ +...++. .+..++..+.+.+.++. +..++++++|+++..++.+
T Consensus 2 yld~aa~~~-~~~~v~~~~~~~~~~~~~n~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~ 79 (382)
T TIGR03403 2 YLDNNATTM-LDPKVKELMDPFFCDIYGNPN-SLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKG 79 (382)
T ss_pred cccCcCCCC-CCHHHHHHHHHHHHhcCcCCc-cccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHH
Confidence 345554444 357899999998886443333 2222221 22333444445555553 3345556667787777766
Q ss_pred ccc---cCC-CceEEecCccchhhhhhh---hcCCCCeeeccCC-----ChHHHHHHHHhcccCCCcEEEeeccccccCC
Q psy16848 95 LGK---MIP-GLHYISDAGNHASMIQGI---RNSSAPKIIYRHN-----DVNHLTQVLENMDVKIPKLVAFETVHSMTGA 162 (514)
Q Consensus 95 l~~---~~~-gd~v~~~~~~h~~~~~~~---~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (514)
+.. ..+ +++|+++..+|++....+ +..|.+++.++.+ |.+++++.+. .+++++.+...-..+|.
T Consensus 80 ~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~----~~t~lv~~~~~~n~tG~ 155 (382)
T TIGR03403 80 VYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAIT----EKTALVSVMWANNETGM 155 (382)
T ss_pred HHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcc----cCCeEEEEEcccCCCcc
Confidence 521 124 578999999998886553 4568888777543 5667766664 24578888777777899
Q ss_pred ccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 163 ICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
+.|..++.++++++|..+.+|..++.|.
T Consensus 156 ~~~~~~I~~la~~~g~~~ivD~a~~~g~ 183 (382)
T TIGR03403 156 IFPIKEIGEICKERGVLFHTDAVQAIGK 183 (382)
T ss_pred ccCHHHHHHHHHHcCCEEEEechhhcCC
Confidence 9999999999999999999999887653
No 469
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=82.89 E-value=2.2 Score=44.72 Aligned_cols=157 Identities=17% Similarity=0.187 Sum_probs=104.5
Q ss_pred ChhHHHHHHHHHH-HhCCCCCCcCcccCc---chHHHHHHHHHHhHcCCCcE-EEEeccccccccchhhcccc---CC--
Q psy16848 31 PKGGRKCLGEALE-KFGTGAGGTRNISGN---SLFHEKLEEDVAKLHQKEAG-LVFTSCYVANDSTLFTLGKM---IP-- 100 (514)
Q Consensus 31 ~~~~~~a~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~la~~~~~~~~-i~~~sGt~a~~~~l~~l~~~---~~-- 100 (514)
.|.+.+++...+. +|..++.+.+++.|. .++...+.+++.++||.+++ +-..||+.||+++..++.+. .|
T Consensus 62 s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~ 141 (493)
T PRK13580 62 SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPAL 141 (493)
T ss_pred CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcch
Confidence 4777777766665 577677777776654 33333445677788999886 55689999999999998761 12
Q ss_pred ------------------------CceEEecCccchhhhh---hhhcCC--CCeeecc------CCChHHHHHHHHhccc
Q psy16848 101 ------------------------GLHYISDAGNHASMIQ---GIRNSS--APKIIYR------HNDVNHLTQVLENMDV 145 (514)
Q Consensus 101 ------------------------gd~v~~~~~~h~~~~~---~~~~~~--~~~~~~~------~~d~~~l~~~l~~~~~ 145 (514)
||+|+.-+..|..-+. .....+ .++..|. ..|++++++.+.+
T Consensus 142 ~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~--- 218 (493)
T PRK13580 142 EKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALARE--- 218 (493)
T ss_pred hccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhh---
Confidence 7888876555533321 111111 1222221 1377888887754
Q ss_pred CCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccc
Q psy16848 146 KIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYG 192 (514)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 192 (514)
.+|+++++ |.... +-..|.+++.++++++|+.+++|.+|..|+.+
T Consensus 219 ~~plvii~-g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Glig 263 (493)
T PRK13580 219 FKPLILVA-GYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVA 263 (493)
T ss_pred cCCEEEEe-Ccccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceec
Confidence 34555554 54444 44779999999999999999999999999887
No 470
>PLN02651 cysteine desulfurase
Probab=81.73 E-value=3 Score=42.24 Aligned_cols=55 Identities=27% Similarity=0.429 Sum_probs=47.0
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
|++++++.+.. +.+++.+..+...+|.+.|..++.++++++|+.+.+|..|+.|.
T Consensus 127 d~~~l~~~i~~----~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~ 181 (364)
T PLN02651 127 DLDELAAAIRP----DTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGK 181 (364)
T ss_pred CHHHHHHhcCC----CcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCC
Confidence 67788877742 46788888888789999999999999999999999999988764
No 471
>PRK08064 cystathionine beta-lyase; Provisional
Probab=81.24 E-value=3 Score=42.71 Aligned_cols=68 Identities=18% Similarity=0.233 Sum_probs=52.4
Q ss_pred hcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 119 RNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 119 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
+..|.+++.++..|.+++++.+. .+.++|.++.....+|.+.+..++.++++++|+.+.+|.+++.+.
T Consensus 114 ~~~G~~v~~v~~~d~~~l~~~l~----~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~ 181 (390)
T PRK08064 114 SRFGIEHTFVDMTNLEEVAQNIK----PNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPL 181 (390)
T ss_pred HHcCCEEEEECCCCHHHHHHhcC----CCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCccc
Confidence 34456666666557777776663 356888888777778999999999999999999999999876554
No 472
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=80.92 E-value=4.9 Score=40.62 Aligned_cols=53 Identities=17% Similarity=0.320 Sum_probs=43.5
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
|++.+|++|... +|.|+.= |.-|.+|....+.++++++|..|..|-+|++|..
T Consensus 111 d~~~ie~aIt~~----tKAIipV---hl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~ 163 (374)
T COG0399 111 DPDLIEAAITPR----TKAIIPV---HLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGAT 163 (374)
T ss_pred CHHHHHHHcccC----CeEEEEe---hhccCCCCHHHHHHHHHHcCCeEEEEcchhccCe
Confidence 888888888654 5655543 3459999999999999999999999999999854
No 473
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=80.68 E-value=3.7 Score=41.68 Aligned_cols=70 Identities=13% Similarity=0.176 Sum_probs=53.5
Q ss_pred hcCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccc
Q psy16848 119 RNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYG 192 (514)
Q Consensus 119 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 192 (514)
+..|.+++.++..|++.+++.+.. ++++|.++.-....+...+..++.++++++|..+.+|+.++.+...
T Consensus 112 ~~~G~~v~~vd~~d~~~l~~~i~~----~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~ 181 (366)
T PRK08247 112 KKWNVRFVYVNTASLKAIEQAITP----NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQ 181 (366)
T ss_pred hccCceEEEECCCCHHHHHHhccc----CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccccc
Confidence 344666666666788888887743 4678887666655688899999999999999999999988655443
No 474
>PLN02409 serine--glyoxylate aminotransaminase
Probab=80.01 E-value=16 Score=37.60 Aligned_cols=59 Identities=27% Similarity=0.296 Sum_probs=48.6
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhh--hhhcCceEEeeccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEV--SHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~ 190 (514)
|.+++++.+......+++++.+.+.-..+|.+.|..++.++ ++++|+.+.+|..++.|.
T Consensus 122 ~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~ 182 (401)
T PLN02409 122 DLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGA 182 (401)
T ss_pred CHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCC
Confidence 68889888876322467888887766678999999999999 999999999999887654
No 475
>PRK06767 methionine gamma-lyase; Provisional
Probab=79.14 E-value=4 Score=41.77 Aligned_cols=61 Identities=20% Similarity=0.225 Sum_probs=49.1
Q ss_pred ccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccc
Q psy16848 128 YRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYG 192 (514)
Q Consensus 128 ~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 192 (514)
....|.+++++.+. .++++|.++.....+|.+.+..++.++++++|+.+.+|++++.+..+
T Consensus 131 ~~~~d~~~l~~~i~----~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~ 191 (386)
T PRK06767 131 CDMETEADIENKIR----PNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQ 191 (386)
T ss_pred eCCCCHHHHHHhhC----cCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccC
Confidence 33346777777664 25789999888888899999999999999999999999998765443
No 476
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=78.93 E-value=2.4 Score=43.05 Aligned_cols=46 Identities=17% Similarity=0.239 Sum_probs=40.6
Q ss_pred CCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccc
Q psy16848 147 IPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYG 192 (514)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 192 (514)
++++|++++....+|++.|.+++.++++++|+.+.+|++|+.|..+
T Consensus 146 ~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~ 191 (370)
T TIGR02539 146 PPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMP 191 (370)
T ss_pred CcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcC
Confidence 4678888888888899999999999999999999999999987543
No 477
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=78.38 E-value=3.4 Score=41.77 Aligned_cols=60 Identities=22% Similarity=0.335 Sum_probs=48.8
Q ss_pred ChHHHHHHHHhcc---cCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 132 DVNHLTQVLENMD---VKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 132 d~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
|++++++.+.+.. ..+++++++.+....+|.+.+..++.++++.+|+.+.+|++|+.|..
T Consensus 121 d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~ 183 (361)
T cd06452 121 TPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRM 183 (361)
T ss_pred CHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCc
Confidence 7889988886532 13577888877666789999999999999999999999999886543
No 478
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=77.67 E-value=3.3 Score=42.14 Aligned_cols=49 Identities=41% Similarity=0.728 Sum_probs=42.6
Q ss_pred CCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccccCC
Q psy16848 147 IPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGEHG 195 (514)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 195 (514)
+.++++++.++..+|.+.|..++.++++++|..+.+|+.++.|..+..+
T Consensus 163 ~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~ 211 (385)
T TIGR01825 163 GKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAG 211 (385)
T ss_pred CCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCC
Confidence 4678888888888999999999999999999999999999888665433
No 479
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=77.38 E-value=4.7 Score=41.19 Aligned_cols=69 Identities=23% Similarity=0.310 Sum_probs=52.1
Q ss_pred cCCCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccc
Q psy16848 120 NSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYG 192 (514)
Q Consensus 120 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 192 (514)
..|.++..++..|++++++.+.. ++++|.++..-..+|.+.+..++.++++++|+.+.+|..++.++.+
T Consensus 111 ~~gi~v~~vd~~d~e~l~~ai~~----~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~ 179 (380)
T PRK06176 111 KNGLSCTIIDTSDLSQIKKAIKP----NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQ 179 (380)
T ss_pred hcCeEEEEcCCCCHHHHHHhcCc----CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccC
Confidence 44555555555678888776642 4677777666556788899999999999999999999998866543
No 480
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=77.35 E-value=29 Score=35.10 Aligned_cols=60 Identities=25% Similarity=0.288 Sum_probs=45.3
Q ss_pred CeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCcc----chhHHhhhhhhcCceEEeecccc
Q psy16848 124 PKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAIC----PLKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 124 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
+...++++|.+.+++.+.+ ++++++++....++|... ...++.++++++|..+.+|+.+.
T Consensus 151 ~~~~~~~~d~~~l~~~~~~----~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~ 214 (379)
T TIGR00707 151 GFSYAPYNDIESLKKAIDD----ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT 214 (379)
T ss_pred CceeeCCCCHHHHHHHhhh----CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 3344566788999887753 467888887776666432 36888999999999999999885
No 481
>PRK12403 putative aminotransferase; Provisional
Probab=76.71 E-value=4.2 Score=42.72 Aligned_cols=54 Identities=20% Similarity=0.219 Sum_probs=44.1
Q ss_pred hHHHHHHHHhcccCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeeccc
Q psy16848 133 VNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVH 186 (514)
Q Consensus 133 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 186 (514)
.++|++.+.+........|+++.++...|.+.| +..++++|+++|+.+.+||.+
T Consensus 208 ~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~ 265 (460)
T PRK12403 208 ALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVI 265 (460)
T ss_pred HHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 355666665444445667889999999999888 999999999999999999988
No 482
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=76.58 E-value=13 Score=37.56 Aligned_cols=77 Identities=6% Similarity=0.012 Sum_probs=48.9
Q ss_pred CCceeeecCchhhHHHHHhhccCC--ceeeecc----hHHHHhhCCCCEEEecCCChhHHHHHHhhccCCCceEEEEecC
Q psy16848 195 GAGIGERDGQLHNMDIISGTLVNP--EVAIHAS----MIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETV 268 (514)
Q Consensus 195 ~~g~~~~~G~~~~i~~~~~~l~~~--~v~~~~~----~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~vv~~~~ 268 (514)
...|+.++|++++++.++.+++++ +++++.+ |...+...|.+++.++.
T Consensus 88 ~~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~-------------------------- 141 (368)
T PRK03317 88 VENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR-------------------------- 141 (368)
T ss_pred hhhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--------------------------
Confidence 346788899999999999999987 5665552 34444455555444331
Q ss_pred CCCCccccCHHHHHHHHHHcC-CEEEEecccc
Q psy16848 269 HSMTGAICPLKELCEVSHQHG-ALTFVDEVHA 299 (514)
Q Consensus 269 ~nptG~~~~l~~l~~l~~~~g-v~li~Dea~~ 299 (514)
. .+.-++++++.+.+++++ -++++...+.
T Consensus 142 -~-~~~~~d~~~l~~~~~~~~~~~i~l~~p~N 171 (368)
T PRK03317 142 -A-ADFTLDVDAAVAAIAEHRPDVVFLTSPNN 171 (368)
T ss_pred -C-CCCCCCHHHHHHHHhccCCCEEEEeCCCC
Confidence 1 123456788888877543 2445556654
No 483
>KOG2862|consensus
Probab=76.35 E-value=45 Score=32.61 Aligned_cols=123 Identities=20% Similarity=0.219 Sum_probs=91.4
Q ss_pred hHHHHHHHHHHhHcCCC--cE-EEEeccccccccchhhccccCCCceEEecCccchhh--hhhhhcCCCCeeeccCC---
Q psy16848 60 LFHEKLEEDVAKLHQKE--AG-LVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASM--IQGIRNSSAPKIIYRHN--- 131 (514)
Q Consensus 60 ~~~~~~~~~la~~~~~~--~~-i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~--~~~~~~~~~~~~~~~~~--- 131 (514)
.+++++.+-+...|... .. ++.+||+.+.+.++.-+.. |||.|++-...-.+- .+..+..|+++..+.-+
T Consensus 50 qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~le--Pgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~ 127 (385)
T KOG2862|consen 50 QIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLE--PGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQ 127 (385)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcC--CCCeEEEEEechHHHHHHHHHHhhCceeeEEecCccc
Confidence 56677777777777533 22 4457899999999988866 999887765544443 45678889988766432
Q ss_pred --ChHHHHHHHHhcccCCCcEEEeeccccccCCccc-hhHHhhhhhhcCceEEeecccc
Q psy16848 132 --DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICP-LKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 132 --d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
..+.++..|++ .+|+.+.+..+=+.+|-+-| ....-++|++++++++||-.-+
T Consensus 128 ~~~le~i~~~lsq---h~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaS 183 (385)
T KOG2862|consen 128 AVPLEEITEKLSQ---HKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVAS 183 (385)
T ss_pred CccHHHHHHHHHh---cCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhh
Confidence 46777777777 56888888777778888888 7888899999999999996443
No 484
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=75.98 E-value=50 Score=33.95 Aligned_cols=113 Identities=19% Similarity=0.294 Sum_probs=65.2
Q ss_pred HHHhHcCCCcEEEEeccccccccchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhcccCC
Q psy16848 68 DVAKLHQKEAGLVFTSCYVANDSTLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDVKI 147 (514)
Q Consensus 68 ~la~~~~~~~~i~~~sGt~a~~~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 147 (514)
....++|+++.+.+.++.++....+..-+. .|-.= .-.+..+.+. ......++.++.||.+.+++.+++.....
T Consensus 128 lARa~TgR~kIikF~G~YHG~~D~~lv~ag--sg~~t-~g~p~s~Gvp---~~~a~~ti~~~yND~~al~~~~~~~g~~I 201 (432)
T COG0001 128 LARAYTGRDKIIKFEGCYHGHSDSLLVKAG--SGAAT-LGSPSSPGVP---ADVAKHTLVLPYNDLEALEEAFEEYGDDI 201 (432)
T ss_pred HHHHhhCCCeEEEEcCCCCCCccHHHhhcC--cCccc-CCCCCCCCCC---hhhhccEEEecCCCHHHHHHHHHHcCCcE
Confidence 444456899999999999974433322111 11100 0001111111 11223566788899999999999886544
Q ss_pred CcEEEeeccccc----cCCccchhHHhhhhhhcCceEEeecccc
Q psy16848 148 PKLVAFETVHSM----TGAICPLKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 148 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
..+|+ +=+-.- ....--+..|+++++++|+.+.+|+.+.
T Consensus 202 AaVIv-EPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViT 244 (432)
T COG0001 202 AAVIV-EPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVIT 244 (432)
T ss_pred EEEEe-ccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchh
Confidence 43333 222211 2222235678999999999999998653
No 485
>PRK02769 histidine decarboxylase; Provisional
Probab=75.81 E-value=36 Score=34.69 Aligned_cols=58 Identities=22% Similarity=0.248 Sum_probs=48.0
Q ss_pred CChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcC---ceEEeecccccc
Q psy16848 131 NDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHG---ALTFVDEVHAVG 189 (514)
Q Consensus 131 ~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g 189 (514)
.|.++|++.+.+. ..+|.+|....+-..+|.+.|..++.++++++| ..+-+|-+++.|
T Consensus 145 id~~~L~~~i~~~-~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~ 205 (380)
T PRK02769 145 IDYDDLISKIKEN-KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGM 205 (380)
T ss_pred CcHHHHHHHHHhC-CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccce
Confidence 3899999999876 566788887777778899999999999999998 578888766543
No 486
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=75.59 E-value=33 Score=34.76 Aligned_cols=59 Identities=27% Similarity=0.383 Sum_probs=43.4
Q ss_pred eeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCc-cc---hhHHhhhhhhcCceEEeecccc
Q psy16848 125 KIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAI-CP---LKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 125 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
+..++.+|.+.+++.+. .+...|+.+......|.. +| +..++++|+++|+.+.+|+.+.
T Consensus 144 ~~~~~~~d~~~l~~~i~----~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~t 206 (364)
T PRK04013 144 FKHIPFNDVEAAKEAIT----KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQS 206 (364)
T ss_pred cEEecCCCHHHHHHHhc----CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 34455568888888774 356777777766544443 34 7899999999999999999876
No 487
>PRK07046 aminotransferase; Validated
Probab=75.45 E-value=38 Score=35.52 Aligned_cols=109 Identities=22% Similarity=0.306 Sum_probs=67.4
Q ss_pred HHHh-HcCCCcEEEEeccccccc-cchhhccccCCCceEEecCccchhhhhhhhcCCCCeeeccCCChHHHHHHHHhccc
Q psy16848 68 DVAK-LHQKEAGLVFTSCYVAND-STLFTLGKMIPGLHYISDAGNHASMIQGIRNSSAPKIIYRHNDVNHLTQVLENMDV 145 (514)
Q Consensus 68 ~la~-~~~~~~~i~~~sGt~a~~-~~l~~l~~~~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 145 (514)
++|+ +.|.++.+.+.++.++.. .++.... .++..- ...+..+.. .....+..++.+|.+.+++.+..
T Consensus 148 rlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~---~~~~~~--~~~~~g~~~---~~~~~~~~~~~nd~~~l~~~l~~--- 216 (453)
T PRK07046 148 RWARAVTGRPKILVFNGCYHGTVDDVFVDLV---DGRPVQ--RPGLLGQVH---DLTATTRVVEFNDLAALEAALAD--- 216 (453)
T ss_pred HHHHHhhCCCEEEEECCCCCCCcHHhHhhcc---CCCCCC--CCCCCCCCc---cccCceEeeCCCCHHHHHHHhCC---
Confidence 3444 458888888888888853 2232221 221000 000111100 01123455677899999998842
Q ss_pred CCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeecccc
Q psy16848 146 KIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
.+...|+++-+....|.+.| +..++++|+++|+.+.+|+.+.
T Consensus 217 ~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t 262 (453)
T PRK07046 217 GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT 262 (453)
T ss_pred CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc
Confidence 34567788877766676666 5889999999999999999886
No 488
>PRK06105 aminotransferase; Provisional
Probab=75.12 E-value=43 Score=35.16 Aligned_cols=172 Identities=14% Similarity=0.021 Sum_probs=119.3
Q ss_pred CCceeeecccC---CCCC--ChhHHHHHHHHHHHhCCCCCCcCcccCcchHHHHHHHHHHhHcC--CCcEEEEecccccc
Q psy16848 16 SNRVTCRLSSV---QYKV--PKGGRKCLGEALEKFGTGAGGTRNISGNSLFHEKLEEDVAKLHQ--KEAGLVFTSCYVAN 88 (514)
Q Consensus 16 ~g~~~~d~~~~---~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~i~~~sGt~a~ 88 (514)
+|++|+||.+. .-++ ||+|.+++.+++++.......+. ...+...++.+++++++. .++++|++||++|+
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~---~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAv 122 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSH---KSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEAN 122 (460)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccc---cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHH
Confidence 66777777432 2233 89999999999998543222111 234677889999999874 35788889999999
Q ss_pred ccchhhccc-------cCCCceEEecCccchhhhhhhhcCCCCe------------eeccCCC-----------------
Q psy16848 89 DSTLFTLGK-------MIPGLHYISDAGNHASMIQGIRNSSAPK------------IIYRHND----------------- 132 (514)
Q Consensus 89 ~~~l~~l~~-------~~~gd~v~~~~~~h~~~~~~~~~~~~~~------------~~~~~~d----------------- 132 (514)
+.|++.... .++...|.....+|..+..++...+... ..++..+
T Consensus 123 e~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 202 (460)
T PRK06105 123 DTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATR 202 (460)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHH
Confidence 999987421 1244566668888988877766554221 1111111
Q ss_pred -hHHHHHHHHhcccCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeeccc-cccc
Q psy16848 133 -VNHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVH-AVGL 190 (514)
Q Consensus 133 -~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~g~ 190 (514)
.+++++.+.+....+...|+++.+....|...| +..++++|+++|+.+.+|+.+ ..|-
T Consensus 203 ~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GR 266 (460)
T PRK06105 203 LANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGR 266 (460)
T ss_pred HHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCc
Confidence 256777776544456678888888877788888 888999999999999999987 3443
No 489
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=74.86 E-value=6.4 Score=40.58 Aligned_cols=65 Identities=31% Similarity=0.298 Sum_probs=49.1
Q ss_pred CCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 122 SAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 122 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
|.+++.++..|.+.+++.+. .++++|+++..-.-+|.+.+..++.++++++|..+.+|+.++.+.
T Consensus 124 g~~v~~v~~~d~~~l~~~i~----~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~ 188 (405)
T PRK08776 124 HFALITADLTDPRSLADALA----QSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPA 188 (405)
T ss_pred CcEEEEECCCCHHHHHHhcC----cCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 33344444457788877764 256888877665567889999999999999999999999987543
No 490
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=74.17 E-value=6.7 Score=40.15 Aligned_cols=64 Identities=27% Similarity=0.357 Sum_probs=49.9
Q ss_pred CeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 124 PKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 124 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
++..+...|.+++++.+. .++++|.++....-+|.+.+..++.++++.+|+.+.+|+.++.++.
T Consensus 119 ~v~~vd~~d~e~l~~~i~----~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~ 182 (388)
T PRK08861 119 KVQFVDQSDAAALDAALA----KKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVL 182 (388)
T ss_pred EEEEECCCCHHHHHHhcC----cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccc
Confidence 334444447777776664 3578888887766789999999999999999999999999987654
No 491
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=74.08 E-value=34 Score=34.76 Aligned_cols=52 Identities=12% Similarity=0.256 Sum_probs=42.3
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
|++++++.+.. +++.|+.. +..|..++..++.++++++|..+.+|.+|+.|.
T Consensus 108 d~~~le~~i~~----~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~ 159 (375)
T PRK11706 108 DETLIEAAITP----KTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMS 159 (375)
T ss_pred CHHHHHHhcCC----CCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECcccccc
Confidence 77888877743 45666654 247888999999999999999999999999886
No 492
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=72.25 E-value=6.4 Score=41.84 Aligned_cols=60 Identities=23% Similarity=0.285 Sum_probs=47.6
Q ss_pred HHHHHHHHhcccCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeeccc-ccccccc
Q psy16848 134 NHLTQVLENMDVKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVH-AVGLYGE 193 (514)
Q Consensus 134 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~g~~~~ 193 (514)
++|++.+.+....+...++++.++...|.+.| +.+++++|+++|+.+.+|+.+ +.|-.|.
T Consensus 247 ~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~ 311 (504)
T PLN02760 247 DNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT 311 (504)
T ss_pred HHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch
Confidence 45777775443445678899999998899998 999999999999999999988 4554443
No 493
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=71.82 E-value=8.3 Score=40.15 Aligned_cols=68 Identities=15% Similarity=0.125 Sum_probs=48.1
Q ss_pred cCCCCeeecc-CCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccc
Q psy16848 120 NSSAPKIIYR-HNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLY 191 (514)
Q Consensus 120 ~~~~~~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (514)
..|.+++.++ ..|++++++.+.. ++++|.++..-.-++.+.|..++.++++++|+.+.+|-.++.|..
T Consensus 131 ~~Gi~v~~vd~~~d~e~l~~~l~~----~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~ 199 (437)
T PRK05613 131 RLGIEVTFVENPDDPESWQAAVQP----NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL 199 (437)
T ss_pred hcCeEEEEECCCCCHHHHHHhCCc----cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc
Confidence 3455555554 3467777776643 456676654333447789999999999999999999998877643
No 494
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=71.53 E-value=47 Score=32.69 Aligned_cols=49 Identities=31% Similarity=0.398 Sum_probs=39.1
Q ss_pred ccCCCcEEEeeccccccCCccchhHHh---hhhhhcCceEEeeccccccccc
Q psy16848 144 DVKIPKLVAFETVHSMTGAICPLKELC---EVSHQHGALTFVDEVHAVGLYG 192 (514)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~ 192 (514)
...+++++++...+..+|...|..++. ++++++|..+.+|++|+.+..+
T Consensus 129 ~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~ 180 (350)
T cd00609 129 KTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYD 180 (350)
T ss_pred cCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeC
Confidence 345678888888666788888877666 7999999999999998766544
No 495
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=69.83 E-value=9.5 Score=38.97 Aligned_cols=56 Identities=25% Similarity=0.361 Sum_probs=45.4
Q ss_pred CChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccc
Q psy16848 131 NDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGL 190 (514)
Q Consensus 131 ~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 190 (514)
.|.+.+++.+.. ++++|.++....-+|...+..++.++++.+|+.+.+|++++.+.
T Consensus 124 ~d~~~l~~ai~~----~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~ 179 (382)
T TIGR02080 124 GDEQALRAALAQ----KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPA 179 (382)
T ss_pred CCHHHHHHhcCc----CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 367777776643 46888887666677999999999999999999999999987664
No 496
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=69.44 E-value=57 Score=33.19 Aligned_cols=53 Identities=23% Similarity=0.329 Sum_probs=39.8
Q ss_pred ChHHHHHHHHhcccCCCcEEEeeccccccCCccch-hHHhhhhhhcCceEEeecccccc
Q psy16848 132 DVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPL-KELCEVSHQHGALTFVDEVHAVG 189 (514)
Q Consensus 132 d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g 189 (514)
|.+++++.+. .+.+.++++.. +.+|...+. .++.++++++|+.+.+|..|..|
T Consensus 148 d~~~l~~~i~----~~t~~viv~~~-~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~ 201 (398)
T cd00613 148 DLEALKEEVS----EEVAALMVQYP-NTLGVFEDLIKEIADIAHSAGALVYVDGDNLNL 201 (398)
T ss_pred CHHHHHHhcC----CCeEEEEEECC-CCCceecchHHHHHHHHHhcCCEEEEEeccccc
Confidence 5677776663 34566666654 356888886 99999999999999999877543
No 497
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=69.10 E-value=5.3 Score=40.74 Aligned_cols=67 Identities=16% Similarity=0.207 Sum_probs=52.3
Q ss_pred CCCeeeccCCChHHHHHHHHhcccCCCcEEEeeccccccCCccchhHHhhhhhhcCceEEeeccccccccc
Q psy16848 122 SAPKIIYRHNDVNHLTQVLENMDVKIPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYG 192 (514)
Q Consensus 122 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 192 (514)
|.++..+...+.+++++.+ ..++++|++++....+|...+.+++.++++++|+.+.+|..|+.|...
T Consensus 114 gi~v~~~d~~~~e~l~~~i----~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~ 180 (377)
T TIGR01324 114 GVDITYYDPLIGEDIATLI----QPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLF 180 (377)
T ss_pred CcEEEEECCCCHHHHHHhc----CCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccccc
Confidence 4444444443445555554 346789999999999999999999999999999999999999988764
No 498
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=68.67 E-value=1e+02 Score=32.09 Aligned_cols=121 Identities=17% Similarity=0.222 Sum_probs=65.6
Q ss_pred HHHHHHHHHhH-cCCCcEEEEeccccccccchhhccc----c------CCCceEEecCccchhhhhhhhcCCCCeeeccC
Q psy16848 62 HEKLEEDVAKL-HQKEAGLVFTSCYVANDSTLFTLGK----M------IPGLHYISDAGNHASMIQGIRNSSAPKIIYRH 130 (514)
Q Consensus 62 ~~~~~~~la~~-~~~~~~i~~~sGt~a~~~~l~~l~~----~------~~gd~v~~~~~~h~~~~~~~~~~~~~~~~~~~ 130 (514)
..+.+=++|+. +|...++.+..+.|+....-.++.. . -++.+..++.+....-.. +........
T Consensus 129 A~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~-----~~~~~~~~~ 203 (447)
T COG0160 129 AVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPF-----GIGGEECGD 203 (447)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcc-----cCchhhhhH
Confidence 34445555555 5778888888888874433333322 0 112233333222111000 000000000
Q ss_pred CChHHHHHHHHhcc--cCCCcEEEeeccccccCCccc----hhHHhhhhhhcCceEEeecccc
Q psy16848 131 NDVNHLTQVLENMD--VKIPKLVAFETVHSMTGAICP----LKELCEVSHQHGALTFVDEVHA 187 (514)
Q Consensus 131 ~d~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 187 (514)
...+.+++.+.... ..++..++++-+....|.+.| +++++++++++|..+.+|+.+.
T Consensus 204 ~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQt 266 (447)
T COG0160 204 DALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQT 266 (447)
T ss_pred HHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 02344566555443 446778888888876666655 4567888999999999999765
No 499
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=68.58 E-value=7.5 Score=38.92 Aligned_cols=47 Identities=38% Similarity=0.646 Sum_probs=40.8
Q ss_pred CCcEEEeeccccccCCccchhHHhhhhhhcCceEEeecccccccccc
Q psy16848 147 IPKLVAFETVHSMTGAICPLKELCEVSHQHGALTFVDEVHAVGLYGE 193 (514)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 193 (514)
+++++++..++..+|.+.+..++.++++++|..+.+|+.|..|..+.
T Consensus 146 ~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~ 192 (360)
T TIGR00858 146 RRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGE 192 (360)
T ss_pred CCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCC
Confidence 35677888888888999999999999999999999999998776554
No 500
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=68.25 E-value=20 Score=35.94 Aligned_cols=45 Identities=7% Similarity=-0.010 Sum_probs=34.5
Q ss_pred ceeeecCchhhHHHHHhhccCC--ceeeec----chHHHHhhCCCCEEEec
Q psy16848 197 GIGERDGQLHNMDIISGTLVNP--EVAIHA----SMIQGIRNSSAPKIIYR 241 (514)
Q Consensus 197 g~~~~~G~~~~i~~~~~~l~~~--~v~~~~----~~~~~~~~~g~~~~~v~ 241 (514)
.|+.++|+++++..+..+++++ +++++. .+...+...|++++.++
T Consensus 83 ~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~ 133 (356)
T PRK04870 83 DVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVP 133 (356)
T ss_pred cEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEec
Confidence 5778889999999999999887 667665 33455567788777665
Done!