Query psy16851
Match_columns 366
No_of_seqs 260 out of 1438
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 23:42:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16851.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16851hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 99.9 1.4E-27 4.8E-32 227.9 15.7 207 83-306 13-236 (280)
2 1xhb_A Polypeptide N-acetylgal 94.6 0.87 3E-05 44.9 16.0 164 115-285 62-251 (472)
3 1qg8_A Protein (spore coat pol 94.5 0.85 2.9E-05 40.4 14.2 155 114-278 30-201 (255)
4 2d7i_A Polypeptide N-acetylgal 93.3 1.7 6E-05 44.3 15.5 162 116-285 146-331 (570)
5 2ffu_A Ppgalnact-2, polypeptid 93.1 1.5 5E-05 43.8 14.3 160 115-285 99-283 (501)
6 4fix_A UDP-galactofuranosyl tr 92.5 3.3 0.00011 43.2 16.4 122 160-285 258-410 (657)
7 3bcv_A Putative glycosyltransf 91.5 2.2 7.7E-05 37.1 12.1 76 114-196 34-109 (240)
8 4hg6_A Cellulose synthase subu 87.2 9.7 0.00033 40.5 15.0 121 156-283 225-359 (802)
9 2z86_A Chondroitin synthase; G 86.6 26 0.0009 35.4 17.4 157 113-285 403-565 (625)
10 2z86_A Chondroitin synthase; G 83.0 19 0.00066 36.4 14.4 162 114-284 123-322 (625)
11 2bo4_A Mannosylglycerate synth 56.3 1.3E+02 0.0044 29.1 12.6 168 114-285 28-210 (397)
12 2c0n_A A197; thermophil protei 50.8 1.3E+02 0.0045 26.5 11.3 126 131-269 16-154 (203)
13 1fo8_A Alpha-1,3-mannosyl-glyc 47.0 1.9E+02 0.0065 27.3 12.1 29 160-189 89-117 (343)
14 1v84_A Galactosylgalactosylxyl 21.9 2.7E+02 0.0093 25.3 7.8 86 159-249 90-184 (253)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.95 E-value=1.4e-27 Score=227.92 Aligned_cols=207 Identities=17% Similarity=0.183 Sum_probs=140.8
Q ss_pred ceEEEEEEcCcC-CHHHHHHHHHHHhcccCCCCeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccC--CCCchHHHHH
Q psy16851 83 LKILILITSALD-HSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVD--SYDNLTLKTV 159 (366)
Q Consensus 83 ~~Lli~V~Sap~-~~~rR~aIR~TW~~~~~~~~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~D--sY~Nlt~Ktl 159 (366)
-+|+|+|+|+++ +.+||.+||+||++.+.. .++|+.....+.+ ... ..+++++.++.+ ++.+++.|+.
T Consensus 13 ~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~---~~fifsd~~d~~l----~~~--~~~~~~~~~~~~~~~~~~l~~K~~ 83 (280)
T 2j0a_A 13 GDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ---QTFIFTDSPDERL----QER--LGPHLVVTQCSAEHSHPALSCKMA 83 (280)
T ss_dssp GGEEEEEECCGGGTTTTHHHHHHTGGGGSGG---GEEEEESSCCHHH----HHH--HGGGEEECCC-------CCCHHHH
T ss_pred ccEEEEEECcHHHHHHHHHHHHHHHhccCCC---ceEEEcCCCcccc----ccc--ccccceeccccccccccchHHHHH
Confidence 479999999998 456889999999987532 2333333333322 222 246788888754 5678999999
Q ss_pred HHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCCCcceEeeeecCCCcccccCCCceeeCCCCCCCCCCCCCCC-
Q psy16851 160 AMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTT- 238 (366)
Q Consensus 160 ~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~~~yP~Y~~- 238 (366)
..+++... ++++|++|+||||||+++||+++|...++.+++|+|.... ..|+|. +++++.+.++...| +||+
T Consensus 84 ~~~~~~l~--~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~-~~~~~~---~~~~~~~~~~~~~~-~y~~G 156 (280)
T 2j0a_A 84 AEFDAFLV--SGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSL-NRPIHA---SELQSKQRTKLVRF-WFATG 156 (280)
T ss_dssp HHHHHHHH--HTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-----------------------C-CEECG
T ss_pred HHHHHHhC--CCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEecc-Cccccc---cccCcccccccccc-CcccC
Confidence 98886542 5899999999999999999999999999999999999874 356653 45666554444455 4775
Q ss_pred CCcccccHHHHHHHHHhhhcC-------CCCCCCchhhHHHHHH-hCCCceeecCCcccCCC---CCCCCccCC--eEEE
Q psy16851 239 GPAYLFTSDVVSDVYTKALET-------TYLKLEDVFTTGVVAQ-SLKIKRQHVNEFFNKRI---PLNACTIKK--GISI 305 (366)
Q Consensus 239 G~gYvlS~d~~~~l~~~s~~~-------~~~~~EDV~ltGi~~~-~~gi~~~~~~~f~~~~~---~~~~c~~~~--~it~ 305 (366)
|+|||||++++++|+...... .....||++| |+|++ ++||.+.+.++|+..+. ...++.+.. .+++
T Consensus 157 GaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~l-G~Cl~~~lGV~~~~~~~Fh~~~~~~~~~~~~~l~~~~~~s~ 235 (280)
T 2j0a_A 157 GAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTV-GYIIECKLGGRLQPSPLFHSHLETLQLLGAAQLPEQVTLSY 235 (280)
T ss_dssp GGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHH-HHHHHHTTCCCEEECTTCCCSSSCGGGCCTTTGGGCSEEEC
T ss_pred CCEEEECHHHHHHHHHhhcccccccccccCCCCccHHH-HHHHHhcCCCCceecccccCCCchhccCCHHHhccCcceec
Confidence 569999999999999765432 2234689998 99998 99999999999986542 256677655 3555
Q ss_pred e
Q psy16851 306 H 306 (366)
Q Consensus 306 H 306 (366)
|
T Consensus 236 ~ 236 (280)
T 2j0a_A 236 G 236 (280)
T ss_dssp E
T ss_pred c
Confidence 5
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=94.63 E-value=0.87 Score=44.90 Aligned_cols=164 Identities=9% Similarity=-0.053 Sum_probs=87.5
Q ss_pred eeEEEEecCCCc-hhhhhHHHHhhhcC-CeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHH
Q psy16851 115 VAIAFVVGIGSD-SGNQIVSEESNLYG-DIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTF 192 (366)
Q Consensus 115 v~v~FvlG~~~~-~~~~~l~~E~~~y~-DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~ 192 (366)
.+++.|-..+.+ ...+.+++-++.+. .|..+...++.. + ..++..+.+.. ..+|++.+|+|+.+..+-|...
T Consensus 62 ~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~G-~----~~a~N~g~~~A-~gd~i~flD~D~~~~p~~L~~l 135 (472)
T 1xhb_A 62 EEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSG-L----IRARLKGAAVS-RGQVITFLDAHCECTAGWLEPL 135 (472)
T ss_dssp EEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCC-H----HHHHHHHHHHC-CSSEEEEEESSEEECTTCHHHH
T ss_pred eEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCCC-h----HHHHHHHHHhc-cCCeEEEECCCeEeCccHHHHH
Confidence 366766655553 35555555556666 465554443322 2 34455566665 6899999999999998776666
Q ss_pred HHhcCC-CcceEeeeec---CCC-------ccccc-----CCCcee-eCCC-------CCCCCCCCCCCCCCcccccHHH
Q psy16851 193 LVKHQN-SKMTFFGRLA---KKW-------RPIRK-----SSSKYY-VSPV-------QYSPNMFPDFTTGPAYLFTSDV 248 (366)
Q Consensus 193 L~~~~~-~~~~~~G~~~---~~~-------~P~R~-----~~skwy-vs~~-------~yp~~~yP~Y~~G~gYvlS~d~ 248 (366)
+..... ....+.|.+. ... .+.+. ...+|. ++.. .......-+++.|+.+++++++
T Consensus 136 l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~ 215 (472)
T 1xhb_A 136 LARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDY 215 (472)
T ss_dssp HHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHH
T ss_pred HHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHH
Confidence 654321 1223333321 000 00000 000111 1100 0000112257889999999999
Q ss_pred HHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851 249 VSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN 285 (366)
Q Consensus 249 ~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~ 285 (366)
.+.+---.........||+-+ ++=+...|.+....+
T Consensus 216 ~~~iGgfde~~~~~g~ED~dl-~~R~~~~G~~i~~~p 251 (472)
T 1xhb_A 216 FQEIGTYDAGMDIWGGENLEI-SFRIWQCGGTLEIVT 251 (472)
T ss_dssp HHHTTSCCTTSCTTCCCCSHH-HHHHHHTTCEEEEEE
T ss_pred HHHcCCCCCcccccCchhHHH-HHHHHhcCCeEEEcc
Confidence 988742111122234899997 877777886655443
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=94.50 E-value=0.85 Score=40.40 Aligned_cols=155 Identities=10% Similarity=0.008 Sum_probs=84.8
Q ss_pred CeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCC-----CchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHH
Q psy16851 114 DVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSY-----DNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPK 188 (366)
Q Consensus 114 ~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY-----~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~ 188 (366)
.+.++.+-..+.+... ++.++......|........- .|.. .-.++..+.+.+ +.+|++.+|+|.++..+.
T Consensus 30 ~~eiivvDd~S~d~t~-~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G--~~~a~N~gi~~a-~g~~i~~lD~Dd~~~~~~ 105 (255)
T 1qg8_A 30 DFELFIMDDNSNEETL-NVIRPFLNDNRVRFYQSDISGVKERTEKTR--YAALINQAIEMA-EGEYITYATDDNIYMPDR 105 (255)
T ss_dssp CEEEEEEECSCCHHHH-HHHGGGGGSTTEEEEECCCCSHHHHHSSCH--HHHHHHHHHHHC-CCSEEEEEETTEEECTTH
T ss_pred ceEEEEEECCCCchHH-HHHHHHhhcCCEEEEecccccccccccccC--HHHHHHHHHHHc-CCCEEEEeCCCCccChHH
Confidence 5677777766653332 233444345556444332100 2332 234566777776 689999999999999877
Q ss_pred HHHHHHhc--CCCcceEeeeecC-----CCcccccCCCceeeCCCCCCCCCCCCCCCCCcccccHHHHHHHHHhh-----
Q psy16851 189 LLTFLVKH--QNSKMTFFGRLAK-----KWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKA----- 256 (366)
Q Consensus 189 L~~~L~~~--~~~~~~~~G~~~~-----~~~P~R~~~skwyvs~~~yp~~~yP~Y~~G~gYvlS~d~~~~l~~~s----- 256 (366)
|...+... .+.-..+.|.... ...+. ..+..+...... ....++.|++.++.+++++.+-...
T Consensus 106 l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~ 180 (255)
T 1qg8_A 106 LLKMVRELDTHPEKAVIYSASKTYHLNENRDIV----KETVRPAAQVTW-NAPCAIDHCSVMHRYSVLEKVKEKFGSYWD 180 (255)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEEEEEEC---CEE----EEEEECCCSCBS-CCTTTSCGGGEEEETHHHHHHHHHHSSSSC
T ss_pred HHHHHHHHHhCCCceEEEeceEEEEeCCCCcch----hhccCchHHHHH-hhcCCCccceEEEEHHHHHhhccccccccc
Confidence 77666543 2333455554321 11111 111122211111 2335678899999999999975211
Q ss_pred hcCCCCCCCchhhHHHHHHhCC
Q psy16851 257 LETTYLKLEDVFTTGVVAQSLK 278 (366)
Q Consensus 257 ~~~~~~~~EDV~ltGi~~~~~g 278 (366)
........||..+ .+-+...|
T Consensus 181 ~~~~~~~~eD~~~-~~r~~~~g 201 (255)
T 1qg8_A 181 ESPAFYRIGDARF-FWRVNHFY 201 (255)
T ss_dssp CCGGGSTTHHHHH-HHHHTTTC
T ss_pred CCcccchHHHHHH-HHHHHHhC
Confidence 0122456799886 55554444
No 4
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=93.29 E-value=1.7 Score=44.26 Aligned_cols=162 Identities=9% Similarity=-0.029 Sum_probs=85.7
Q ss_pred eEEEEecCCC-chhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHHH
Q psy16851 116 AIAFVVGIGS-DSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLV 194 (366)
Q Consensus 116 ~v~FvlG~~~-~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~ 194 (366)
.++.|-..+. .++.+.+++-++.+..|..+...... ++ ..+...+.+.. ..+|++.+|+|+.+..+-|...+.
T Consensus 146 EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~-G~----~~A~N~G~~~A-~gd~i~fLD~D~~~~p~~L~~ll~ 219 (570)
T 2d7i_A 146 EIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKRE-GL----IRTRMLGASVA-TGDVITFLDSHCEANVNWLPPLLD 219 (570)
T ss_dssp EEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSCC-CH----HHHHHHHHHHC-CSSEEEECCSSEEECTTCSHHHHH
T ss_pred EEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCCC-CH----HHHHHHHHHhc-CCCEEEEEcCCccccccHHHHHHH
Confidence 5676666555 44355566656667666555443322 22 23445555555 689999999999998766555554
Q ss_pred hcCCCcceEee-eec---CCCcc--------cccCCCcee-----eCCC---CCCC---CCCCCCCCCCcccccHHHHHH
Q psy16851 195 KHQNSKMTFFG-RLA---KKWRP--------IRKSSSKYY-----VSPV---QYSP---NMFPDFTTGPAYLFTSDVVSD 251 (366)
Q Consensus 195 ~~~~~~~~~~G-~~~---~~~~P--------~R~~~skwy-----vs~~---~yp~---~~yP~Y~~G~gYvlS~d~~~~ 251 (366)
.........+| .+. ..... .+.. -.|. ++.. .+.. ..--+++.|+++++++++.+.
T Consensus 220 ~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~ 298 (570)
T 2d7i_A 220 RIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGA-FDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWE 298 (570)
T ss_dssp HHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEE-ECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHH
T ss_pred HHHhCCCEEEeeeeeccCCCchhhccccCCccccc-ccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHh
Confidence 32211223333 211 00000 0000 0010 1100 1111 111256789999999999988
Q ss_pred HHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851 252 VYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN 285 (366)
Q Consensus 252 l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~ 285 (366)
+---.........||+-+ .+=+.+.|.+....+
T Consensus 299 iGgfDe~~~~~g~ED~dl-~~Rl~~~G~~i~~~p 331 (570)
T 2d7i_A 299 LGGYDPGLEIWGGEQYEI-SFKVWMCGGRMEDIP 331 (570)
T ss_dssp TTSSCTTCCSSSSHHHHH-HHHHHHTTCEEEEEE
T ss_pred cCCCCCcccccCcchHHH-HHHHHhCCCeEEEcc
Confidence 832111122223799997 777778887665443
No 5
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=93.06 E-value=1.5 Score=43.76 Aligned_cols=160 Identities=7% Similarity=-0.079 Sum_probs=84.1
Q ss_pred eeEEEEecCCC-chhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHH
Q psy16851 115 VAIAFVVGIGS-DSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFL 193 (366)
Q Consensus 115 v~v~FvlG~~~-~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L 193 (366)
.++++|-..+. +++. ...+.+..|..+.... |.. ...++..+.+.. ..+|++.+|+|..+..+-|...+
T Consensus 99 ~EIIvVDDgS~D~t~~----~~~~~~~~v~vi~~~~---n~G--~~~A~N~G~~~A-~gd~i~flD~D~~~~p~~L~~ll 168 (501)
T 2ffu_A 99 KEIILVDDYSNDPEDG----ALLGKIEKVRVLRNDR---REG--LMRSRVRGADAA-QAKVLTFLDSHCECNEHWLEPLL 168 (501)
T ss_dssp EEEEEEECSCSCTHHH----HGGGGBTTEEEEECSS---CCH--HHHHHHHHHHHC-CSSEEEECCSSEEECTTCHHHHH
T ss_pred eeEEEEECCCCchHHH----HHHhcCCCEEEEECCC---CcC--HHHHHHHHHHhc-CCCEEEEECCCcccCccHHHHHH
Confidence 46777766555 3332 2234456665544433 322 234556666665 68999999999999987766666
Q ss_pred HhcCCC-cceEeeeec---CCCcc-------ccc-----CCCcee-eCCC-------CCCCCCCCCCCCCCcccccHHHH
Q psy16851 194 VKHQNS-KMTFFGRLA---KKWRP-------IRK-----SSSKYY-VSPV-------QYSPNMFPDFTTGPAYLFTSDVV 249 (366)
Q Consensus 194 ~~~~~~-~~~~~G~~~---~~~~P-------~R~-----~~skwy-vs~~-------~yp~~~yP~Y~~G~gYvlS~d~~ 249 (366)
...... ...+.+.+. ..... .+. ..-+|. ++.. .......-+++.|++.++++++.
T Consensus 169 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~ 248 (501)
T 2ffu_A 169 ERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYF 248 (501)
T ss_dssp HHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHH
T ss_pred HHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHH
Confidence 543211 223333221 00000 000 000110 1100 00011122577899999999999
Q ss_pred HHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851 250 SDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN 285 (366)
Q Consensus 250 ~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~ 285 (366)
+.+---.........||+-+ .+-+...|.+....+
T Consensus 249 ~~iGgfde~~~~~g~ED~dl-~~Rl~~~G~~i~~~p 283 (501)
T 2ffu_A 249 EELGKYDMMMDVWGGENLEI-SFRVWQCGGSLEIIP 283 (501)
T ss_dssp HHTTCCCTTCCSSSSHHHHH-HHHHHHTTCEEEEEE
T ss_pred HHhCCCCccccccCcchHHH-HHHHHhcCCeEEEcc
Confidence 88842111122234899987 776777886655444
No 6
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=92.47 E-value=3.3 Score=43.24 Aligned_cols=122 Identities=15% Similarity=0.151 Sum_probs=69.2
Q ss_pred HHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcC-CCcceEee-eecCCCcccc-cCCCcee---------eCCCC
Q psy16851 160 AMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQ-NSKMTFFG-RLAKKWRPIR-KSSSKYY---------VSPVQ 227 (366)
Q Consensus 160 ~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~-~~~~~~~G-~~~~~~~P~R-~~~skwy---------vs~~~ 227 (366)
.+++.+.... +++||+.+|||+.+..+.|...+.... ..+..++| .+.....+.+ ...+.|. ++...
T Consensus 258 ~Gl~~A~g~~-~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 336 (657)
T 4fix_A 258 RVMYEALKNT-DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAE 336 (657)
T ss_dssp HHHHHHHHHC-CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCC
T ss_pred HHHHHHHhcC-CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccccccccccc
Confidence 4566665543 689999999999999887777665431 11233444 3321111100 0000010 00000
Q ss_pred -------------------CCCCCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851 228 -------------------YSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN 285 (366)
Q Consensus 228 -------------------yp~~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~ 285 (366)
+.......|+.|++.++.+++++.+- ...--++..||+-+ ++=+.+.|.+....+
T Consensus 337 ~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vG--gfd~~F~~~ED~Dl-~lR~~~~G~ki~~~p 410 (657)
T 4fix_A 337 YDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELG--QPLPLFIKWDDADY-GLRAAEHGYPTVTLP 410 (657)
T ss_dssp SCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHC--SCCSCSSSSHHHHH-HHHHHHTTCCEEEEE
T ss_pred ccccccccccccccccccccccceeccccchhHhHhhHHHHHHhC--CChhHhccCcHHHH-HHHHHHcCCeEEEEC
Confidence 11112335888999999999999873 22222456799997 887888887654433
No 7
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=91.51 E-value=2.2 Score=37.10 Aligned_cols=76 Identities=14% Similarity=0.144 Sum_probs=48.2
Q ss_pred CeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHH
Q psy16851 114 DVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFL 193 (366)
Q Consensus 114 ~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L 193 (366)
.++++.+-..+.+...+.+++-++.+..|.... .+ |.. .-.+...+.+.+ +.+|++.+|+|.++..+.|...+
T Consensus 34 ~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~-~~---n~G--~~~a~N~g~~~a-~g~~i~~lD~Dd~~~~~~l~~l~ 106 (240)
T 3bcv_A 34 DIEIILIDDESPDNCPKICDDYAAQYPNIKVIH-KK---NAG--LGMACNSGLDVA-TGEYVAFCDSDDYVDSDMYMTMY 106 (240)
T ss_dssp SEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE-CC---CCC--HHHHHHHHHHHC-CSSEEEECCTTCCCCTTHHHHHH
T ss_pred CeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE-CC---CCC--hHHHHHHHHHHc-CCCEEEEECCCCcCCHHHHHHHH
Confidence 567777766555444444554455666665554 22 322 134556666666 68999999999999987776666
Q ss_pred Hhc
Q psy16851 194 VKH 196 (366)
Q Consensus 194 ~~~ 196 (366)
...
T Consensus 107 ~~~ 109 (240)
T 3bcv_A 107 NVA 109 (240)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 8
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=87.19 E-value=9.7 Score=40.50 Aligned_cols=121 Identities=15% Similarity=0.020 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhc--CCCcceEeeeecC-CCccc-ccCCCcee-eCCC--C-
Q psy16851 156 LKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKH--QNSKMTFFGRLAK-KWRPI-RKSSSKYY-VSPV--Q- 227 (366)
Q Consensus 156 ~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~--~~~~~~~~G~~~~-~~~P~-R~~~skwy-vs~~--~- 227 (366)
.|. ..++.+.+.+ +.+|++.+|+|+.+..+.|.+.+... +++-....|.... +..|. ++. +.+. ++.+ .
T Consensus 225 GKa-~alN~gl~~a-~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 301 (802)
T 4hg6_A 225 AKA-GNMSAALERL-KGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNL-ALGDRCPPENEMF 301 (802)
T ss_dssp HHH-HHHHHHHHHC-CCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHH-TCCTTSCCTTHHH
T ss_pred cch-HHHHHHHHhc-CCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhh-hHHhhhhHHHHHH
Confidence 453 3567777776 68999999999999988877777654 3333344443221 11111 100 0000 0000 0
Q ss_pred CCC------CCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceee
Q psy16851 228 YSP------NMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQH 283 (366)
Q Consensus 228 yp~------~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~ 283 (366)
|.. ..--+++.|++.++.+++.+.+- ... ...-.||..+ +.-+.+.|.+...
T Consensus 302 ~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vG--gf~-~~~~~ED~~l-~~rl~~~G~ri~~ 359 (802)
T 4hg6_A 302 YGKIHRGLDRWGGAFFCGSAAVLRRRALDEAG--GFA-GETITEDAET-ALEIHSRGWKSLY 359 (802)
T ss_dssp HHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHT--TCC-CSSSSHHHHH-HHHHHTTTCCEEE
T ss_pred HHHHHhhHhhcCCceecccchhhhHHHHHHcC--CcC-CCCcchHHHH-HHHHHHcCCeEEE
Confidence 000 00113567999999999999873 111 1223599997 8888887765443
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=86.56 E-value=26 Score=35.41 Aligned_cols=157 Identities=12% Similarity=0.061 Sum_probs=83.6
Q ss_pred CCeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHH
Q psy16851 113 NDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTF 192 (366)
Q Consensus 113 ~~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~ 192 (366)
.++.++.+-..+.+...+.+.+-.+.+..|.... .. |.. .-.++..+.+.+ +.+|++.+|+|.++..+.|...
T Consensus 403 ~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~-~~---n~G--~~~a~n~g~~~a-~g~~i~~ld~D~~~~~~~l~~~ 475 (625)
T 2z86_A 403 TDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS-QK---NKG--IGSASNTAVRLC-RGFYIGQLDSDDFLEPDAVELC 475 (625)
T ss_dssp CSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE-EC---CCC--HHHHHHHHHHHC-CSSEEEECCTTCEECTTHHHHH
T ss_pred CCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe-CC---CCC--HHHHHHHHHHhc-CCCEEEEECCCcccChhHHHHH
Confidence 3567777766665433344444445566665543 22 221 124556666666 6899999999999998887776
Q ss_pred HHhc--CCCcceEeeeecCCCcccccCCCceeeCCC---CCCC-CCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCc
Q psy16851 193 LVKH--QNSKMTFFGRLAKKWRPIRKSSSKYYVSPV---QYSP-NMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLED 266 (366)
Q Consensus 193 L~~~--~~~~~~~~G~~~~~~~P~R~~~skwyvs~~---~yp~-~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~ED 266 (366)
+... .+.-..+.|.... .+..+++.-... .+.. ...-.++.|++.++.+++.+.+. .....+...||
T Consensus 476 ~~~~~~~~~~~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g--gfd~~~~~~eD 548 (625)
T 2z86_A 476 LDEFRKDLSLACVYTTNRN-----IDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTE--GFNESISNAVD 548 (625)
T ss_dssp HHHHHHCTTCSEEEEEEEE-----ECTTSCEEEECCCCSSCCHHHHTTSCCCCSCEEEEHHHHTTTT--CCCSSCSSCHH
T ss_pred HHHHHhCCCeeEEEeeeEE-----ECCCCCEeccCcccccCCHHHHhhcccCCceEEEEHHHHHHhC--CCCCccCChHH
Confidence 6543 2333444443211 011111110000 1110 01123566788889988766542 12223446799
Q ss_pred hhhHHHHHHhCCCceeecC
Q psy16851 267 VFTTGVVAQSLKIKRQHVN 285 (366)
Q Consensus 267 V~ltGi~~~~~gi~~~~~~ 285 (366)
.-+ .+-+.+.| .....+
T Consensus 549 ~dl-~~r~~~~g-~~~~~~ 565 (625)
T 2z86_A 549 YDM-YLKLSEVG-PFKHIN 565 (625)
T ss_dssp HHH-HHHHTTTS-CEEEEE
T ss_pred HHH-HHHHHHhC-CEEEeC
Confidence 886 66666667 444443
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=82.97 E-value=19 Score=36.43 Aligned_cols=162 Identities=13% Similarity=0.036 Sum_probs=81.9
Q ss_pred CeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHH
Q psy16851 114 DVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFL 193 (366)
Q Consensus 114 ~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L 193 (366)
...++.+-..+.+...+ +.++......+......+.-... -.++..+.+.+ +.+|++.+|+|..+..+.|...+
T Consensus 123 ~~eiivvDd~s~d~t~~-~~~~~~~~~~i~~i~~~~~~~g~----~~a~N~g~~~a-~g~~v~~lD~D~~~~~~~l~~~~ 196 (625)
T 2z86_A 123 DYEVIVADDGSKENIEE-IVREFESLLNIKYVRQKDYGYQL----CAVRNLGLRAA-KYNYVAILDCDMAPNPLWVQSYM 196 (625)
T ss_dssp CEEEEEEEESCSSCHHH-HHHTTTTTSCEEEEEECCCSCCH----HHHHHHHHHHC-CSSEEEEECTTEEECTTHHHHHH
T ss_pred CeEEEEEeCCCchhHHH-HHHHhhhcCCeEEEEeCCCCcch----hHHHHHHHHhC-CcCEEEEECCCCCCCHHHHHHHH
Confidence 56777776555533322 33333322344433322211111 23455566665 68999999999999987776666
Q ss_pred HhcC-CCcceEeeeecC-CCcc------------ccc-----------------CCCceee----CCCCCCCCCCC-CCC
Q psy16851 194 VKHQ-NSKMTFFGRLAK-KWRP------------IRK-----------------SSSKYYV----SPVQYSPNMFP-DFT 237 (366)
Q Consensus 194 ~~~~-~~~~~~~G~~~~-~~~P------------~R~-----------------~~skwyv----s~~~yp~~~yP-~Y~ 237 (366)
.... .....++|.... .... .+. ....|.. ..........| .++
T Consensus 197 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (625)
T 2z86_A 197 ELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFF 276 (625)
T ss_dssp HHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGC
T ss_pred HHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEE
Confidence 5432 123344443211 0000 000 0000100 00000011111 257
Q ss_pred CCCcccccHHHHHHHHHhhhcCCCC--CCCchhhHHHHHHhCCCceeec
Q psy16851 238 TGPAYLFTSDVVSDVYTKALETTYL--KLEDVFTTGVVAQSLKIKRQHV 284 (366)
Q Consensus 238 ~G~gYvlS~d~~~~l~~~s~~~~~~--~~EDV~ltGi~~~~~gi~~~~~ 284 (366)
.|++.++++++++.+- .....++ ..||..+ ++=+...|.+....
T Consensus 277 ~g~~~~~rr~~l~~iG--gfde~~~~~g~ED~dl-~~Rl~~~G~~i~~~ 322 (625)
T 2z86_A 277 SGGNVAFAKKWLFRAG--WFDEEFTHWGGEDNEF-GYRLYREGCYFRSV 322 (625)
T ss_dssp CTTEEEEETHHHHHHC--CCCTTCSSCCCHHHHH-HHHHHHTTCEEEEC
T ss_pred eeceeeeEHHHHHHhC--CCccccccCCcchhhh-hhhHHhCCceEEEc
Confidence 8999999999999883 1222222 3799997 87787888655443
No 11
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=56.28 E-value=1.3e+02 Score=29.06 Aligned_cols=168 Identities=9% Similarity=-0.019 Sum_probs=85.7
Q ss_pred CeeEEEEecCCCchhhh---hHHHHhh-hcCC-eEEeccc--C-CCCchHHHHHHHHHHHHhhCCCcceEEEeCCCce-e
Q psy16851 114 DVAIAFVVGIGSDSGNQ---IVSEESN-LYGD-IIQGNFV--D-SYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMF-I 184 (366)
Q Consensus 114 ~v~v~FvlG~~~~~~~~---~l~~E~~-~y~D-Ii~~df~--D-sY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~f-V 184 (366)
...+++|-+.|.+...+ ++..+.. .++. ++..... . .-.....=...+++|+.+.. +.++++.+|.|.- .
T Consensus 28 ~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al~~G~~~Al~~a-~gd~vv~mDADlq~~ 106 (397)
T 2bo4_A 28 RVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEET-QWERIHFYDADITSF 106 (397)
T ss_dssp TCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHHHHHHHHHHHC-CCSEEEECCTTCSSC
T ss_pred CeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHHHHHHHHHHHhC-CCCEEEEEcCCCCCC
Confidence 35788888877733222 2222333 3444 3322222 1 01234555677888887434 6899999999995 7
Q ss_pred chHHHHHHHHhcCCCcceEeeeecCC--CcccccCCCceeeCCCCCCCC--CCCCCCCCCcccccHHHHHHHHHhh--hc
Q psy16851 185 NVPKLLTFLVKHQNSKMTFFGRLAKK--WRPIRKSSSKYYVSPVQYSPN--MFPDFTTGPAYLFTSDVVSDVYTKA--LE 258 (366)
Q Consensus 185 n~~~L~~~L~~~~~~~~~~~G~~~~~--~~P~R~~~skwyvs~~~yp~~--~yP~Y~~G~gYvlS~d~~~~l~~~s--~~ 258 (366)
.++-+..++......-.+.+|..... .....+...++..+ ..|+.- .......++.+++++++++.+.... ..
T Consensus 107 ~P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~-~~~~~~~~~~i~dp~sG~~a~~R~vl~~l~~~~~~~~ 185 (397)
T 2bo4_A 107 GPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFA-LLWPHTELSWIEQPLGGELLMRREVAAMLYEDERVRR 185 (397)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHH-HHCTTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHHHT
T ss_pred CHHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHH-HHHHHhhccccccCCcccEEEeHHHHHHHhhhcccCc
Confidence 77766666654433335667753221 11110000111000 011110 0112335677899999999985421 11
Q ss_pred CCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851 259 TTYLKLEDVFTTGVVAQSLKIKRQHVN 285 (366)
Q Consensus 259 ~~~~~~EDV~ltGi~~~~~gi~~~~~~ 285 (366)
..-+. .|+.+ -+.+.+.|.+...++
T Consensus 186 ~~~fg-~eiel-~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 186 RSDWG-IDTLY-TFVTVQQGVSIYECY 210 (397)
T ss_dssp CCSTT-HHHHH-HHHHHHTTCCEEEEE
T ss_pred CCCcc-hHHHH-HHHHHHcCCEEEEEE
Confidence 22233 37776 455566776654443
No 12
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=50.76 E-value=1.3e+02 Score=26.50 Aligned_cols=126 Identities=12% Similarity=0.016 Sum_probs=70.9
Q ss_pred hHHHHhhhcCCeEEecccCCCCchHH-HHHHHHHHHHhhCCCcceEEEeCCC---ceechHHHHHHHHhcCCCcceEeee
Q psy16851 131 IVSEESNLYGDIIQGNFVDSYDNLTL-KTVAMMEWIHDYCPDTHFILKTDDD---MFINVPKLLTFLVKHQNSKMTFFGR 206 (366)
Q Consensus 131 ~l~~E~~~y~DIi~~df~DsY~Nlt~-Ktl~~l~w~~~~c~~~~fvlK~DDD---~fVn~~~L~~~L~~~~~~~~~~~G~ 206 (366)
.|+.+..+.|==+++.+.++. ++. .-.+.=.|+.+ .++++++.+|.| .-.+++.+.++|.. ..++..|.
T Consensus 16 ~l~~~l~~~gi~~~l~~~~Sl--I~raRN~lv~~Fl~~--~~~dhllfIDAD~~~I~FdPe~V~rLl~~---g~DVV~Gs 88 (203)
T 2c0n_A 16 PLIDFLVKNDIEYVILSRRNH--VAVQREIALDMFLEM--KDYDTLAFLDEDVVPIEIDFQKVEAKFNE---GYDVVCGY 88 (203)
T ss_dssp HHHHHHHHTTCCEEEECCCSC--HHHHHHHHHHHHHHC--TTCCEEEEECTTEEEEECCHHHHHHHHHH---TCSEEEEE
T ss_pred HHHHHHHhCCCeEEEEccccc--hHHHHHHHHHHHHhc--CCCCEEEEEeCCCCccccCHHHHHHHHhC---CCCEEEEE
Confidence 345555553433455555443 332 22222235443 368999999999 99999999999965 35677786
Q ss_pred ecCCCcccccCCCceeeCCCCCCCCCCC---CCCCCCcccccHHHHHHHHHhhhc------CCCCCCCchhh
Q psy16851 207 LAKKWRPIRKSSSKYYVSPVQYSPNMFP---DFTTGPAYLFTSDVVSDVYTKALE------TTYLKLEDVFT 269 (366)
Q Consensus 207 ~~~~~~P~R~~~skwyvs~~~yp~~~yP---~Y~~G~gYvlS~d~~~~l~~~s~~------~~~~~~EDV~l 269 (366)
...+... . .+.+ .+.|....-+ .||.+|.-+++|.+.+.|...... .+..--|||+.
T Consensus 89 Yp~K~~~--~-~s~~---a~~y~~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F 154 (203)
T 2c0n_A 89 YYLKTLR--G-YSVY---RKDWEKEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYF 154 (203)
T ss_dssp CBCTTSS--S-BSEE---SSSBCSSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHH
T ss_pred eeccCCC--c-cchH---HHHHHHhccCceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEE
Confidence 5443211 0 0100 1123322212 477788889999999988544331 11122388876
No 13
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=46.99 E-value=1.9e+02 Score=27.30 Aligned_cols=29 Identities=10% Similarity=0.040 Sum_probs=21.8
Q ss_pred HHHHHHHhhCCCcceEEEeCCCceechHHH
Q psy16851 160 AMMEWIHDYCPDTHFILKTDDDMFINVPKL 189 (366)
Q Consensus 160 ~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L 189 (366)
.++.++.+.. ++++++.+|||..+.++-+
T Consensus 89 ~al~~vf~~~-~~~~vIiLEDDl~~spdF~ 117 (343)
T 1fo8_A 89 WALGQIFHNF-NYPAAVVVEDDLEVAPDFF 117 (343)
T ss_dssp HHHHHHHTTS-CCSEEEEEETTEEECTTHH
T ss_pred HHHHHHHHhc-cCCEEEEEcCCCeECHHHH
Confidence 4555555443 5899999999999998655
No 14
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=21.86 E-value=2.7e+02 Score=25.29 Aligned_cols=86 Identities=9% Similarity=0.120 Sum_probs=49.2
Q ss_pred HHHHHHHHhhCC----CcceEEEeCCCceechHHHHHHHHhcCCCcceEeeeecCC--CcccccCCCc---eeeCCCCCC
Q psy16851 159 VAMMEWIHDYCP----DTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKK--WRPIRKSSSK---YYVSPVQYS 229 (366)
Q Consensus 159 l~~l~w~~~~c~----~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~~~G~~~~~--~~P~R~~~sk---wyvs~~~yp 229 (366)
-++|+|+.++.. .---|+++|||--..+.- ++.+++...-.-.-+|.+... ..|.-+.++| |+.... |
T Consensus 90 n~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~L-F~emR~i~~vgvWPVglvg~~~~EgPv~~~~gkVvGw~~~w~--~ 166 (253)
T 1v84_A 90 NLALRWLRETFPRNSSQPGVVYFADDDNTYSLEL-FEEMRSTRRVSVWPVAFVGGLRYEAPRVNGAGKVVRWKTVFD--P 166 (253)
T ss_dssp HHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHH-HHHHHTCSSEEECCEESCTTSSEEEEEECTTSCEEEEECSSC--T
T ss_pred HHHHHHHHHhcccccccceeEEEecCCCcccHHH-HHHHhccCeeEEEEEEeecCcceecCeECCCCCEeeeecccC--C
Confidence 468899988652 235689999999888765 455665432111222333211 2455444455 776421 3
Q ss_pred CCCCCCCCCCCcccccHHHH
Q psy16851 230 PNMFPDFTTGPAYLFTSDVV 249 (366)
Q Consensus 230 ~~~yP~Y~~G~gYvlS~d~~ 249 (366)
...|| ..=+||.++..++
T Consensus 167 ~R~fp--iDmAGFA~N~~ll 184 (253)
T 1v84_A 167 HRPFA--IDMAGFAVNLRLI 184 (253)
T ss_dssp TSTTC--CCGGGEEEEHHHH
T ss_pred CCCcc--ceeeeeEEEehhh
Confidence 33333 2346899999865
Done!