Query psy16859
Match_columns 168
No_of_seqs 157 out of 1271
Neff 12.0
Searched_HMMs 29240
Date Fri Aug 16 23:53:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16859.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16859hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j8h_A Titin, connectin; cardi 100.0 5.9E-30 2E-34 160.3 19.7 161 1-167 31-192 (197)
2 3rbs_A Myomesin-1; immunoglobu 100.0 3.5E-29 1.2E-33 158.0 20.5 161 1-168 30-203 (207)
3 2a38_A Titin; Z1Z2, structural 100.0 2.9E-29 9.9E-34 156.7 19.5 158 1-167 32-190 (194)
4 2r15_A Myomesin-1; sarcomeric 100.0 6.5E-29 2.2E-33 157.1 20.9 163 2-167 31-205 (212)
5 2rik_A Titin; I-SET IG fold, p 100.0 2E-28 6.9E-33 161.2 21.6 154 1-167 126-279 (284)
6 4fa8_A Secreted protein BARF1; 100.0 8.7E-30 3E-34 160.2 13.7 153 1-165 23-195 (203)
7 3lcy_A Titin; A-BAND, IG tande 100.0 3.8E-28 1.3E-32 151.9 19.2 155 1-167 34-191 (197)
8 2yd1_A Tyrosine-protein phosph 100.0 2E-27 6.9E-32 150.5 22.3 156 1-163 33-190 (212)
9 2yd6_A PTPRD protein; hydrolas 100.0 1.9E-27 6.5E-32 150.6 21.9 157 1-163 33-194 (212)
10 3b43_A Titin; I-SET IG fold, e 100.0 5.6E-28 1.9E-32 172.8 21.2 153 1-166 318-470 (570)
11 3b43_A Titin; I-SET IG fold, e 100.0 7E-28 2.4E-32 172.3 21.4 155 1-168 411-566 (570)
12 2rik_A Titin; I-SET IG fold, p 100.0 5.4E-27 1.8E-31 154.4 23.8 155 1-167 32-186 (284)
13 2wv3_A Neuroplastin; igcam, me 100.0 8.9E-27 3E-31 145.1 22.7 146 3-167 34-185 (190)
14 2nzi_A Titin; IG-domain, FNIII 100.0 3.5E-27 1.2E-31 156.7 20.0 161 1-167 31-192 (305)
15 2y25_A Myomesin; structural pr 100.0 1.3E-27 4.3E-32 159.5 17.1 165 1-167 135-310 (317)
16 2va4_A NCAM2, N-CAM 2, neural 100.0 2E-26 6.9E-31 143.5 20.6 152 1-168 31-189 (192)
17 2c5d_C AXL oncogene, tyrosine- 100.0 2.6E-26 8.8E-31 143.6 19.7 145 1-163 30-183 (195)
18 1epf_A NCAM, protein (neural c 100.0 1.3E-26 4.4E-31 144.4 17.4 149 2-162 31-181 (191)
19 1itb_B Type 1 interleukin-1 re 100.0 2.8E-26 9.5E-31 153.0 19.9 158 1-168 136-310 (315)
20 2iep_A Muscle-specific kinase 100.0 7E-27 2.4E-31 145.7 15.8 146 1-163 34-180 (192)
21 2jll_A NCAM2, neural cell adhe 100.0 4.1E-26 1.4E-30 156.2 20.5 154 1-166 27-188 (389)
22 3grw_A Fibroblast growth facto 100.0 2.2E-26 7.6E-31 148.1 17.7 158 1-167 42-213 (241)
23 2v44_A NCAM2, neural cell adhe 99.9 6E-26 2.1E-30 141.2 17.5 145 2-163 30-178 (189)
24 3kld_A Contactin 4, axcam, BIG 99.9 1.2E-26 4E-31 158.9 15.1 146 1-167 232-378 (384)
25 3laf_A Deleted in colorectal c 99.9 4.4E-26 1.5E-30 156.6 16.9 149 1-167 248-396 (403)
26 1rhf_A Tyrosine-protein kinase 99.9 1.3E-25 4.3E-30 138.9 17.4 142 1-163 29-173 (182)
27 3p3y_A Neurofascin; IG domains 99.9 2.5E-26 8.6E-31 157.8 14.6 149 1-167 249-398 (404)
28 3ojm_B Fibroblast growth facto 99.9 4.5E-26 1.5E-30 145.7 14.4 158 1-167 46-216 (231)
29 2v5t_A NCAM2, N-CAM 2, neural 99.9 1.5E-25 5.2E-30 139.2 16.4 151 1-167 29-183 (189)
30 1bih_A Hemolin; insect immunit 99.9 6.9E-26 2.4E-30 155.2 16.0 151 1-167 239-391 (395)
31 2yd9_A Receptor-type tyrosine- 99.9 1.5E-25 5.3E-30 148.8 16.1 156 1-163 33-191 (304)
32 2yd9_A Receptor-type tyrosine- 99.9 3.2E-25 1.1E-29 147.3 16.8 151 1-167 135-286 (304)
33 2v5m_A Dscam; neurobiology SPL 99.9 4.4E-25 1.5E-29 151.0 17.7 142 1-168 239-385 (388)
34 3s97_C Contactin-1; carbonic a 99.9 2.3E-25 8E-30 139.6 14.6 156 1-167 36-196 (201)
35 2y23_A Myomesin; structural pr 99.9 7E-25 2.4E-29 145.9 17.6 161 1-164 29-194 (312)
36 1qz1_A Neural cell adhesion mo 99.9 4.3E-25 1.5E-29 145.7 16.3 153 1-167 127-285 (291)
37 3oq3_B IFN-alpha/beta binding 99.9 2.6E-24 8.8E-29 144.5 20.0 155 1-168 155-326 (329)
38 2y23_A Myomesin; structural pr 99.9 9E-25 3.1E-29 145.4 17.3 161 1-168 135-308 (312)
39 1f97_A Junction adhesion molec 99.9 1.5E-25 5E-30 141.6 12.7 146 1-162 28-195 (212)
40 1hng_A CD2; T lymphocyte adhes 99.9 3.9E-25 1.3E-29 136.3 13.5 136 2-168 26-172 (176)
41 1cs6_A Axonin-1; neural cell a 99.9 5.6E-25 1.9E-29 150.2 15.3 144 1-167 234-377 (382)
42 2vr9_A Roundabout 1, ROBO; imm 99.9 1.6E-25 5.6E-30 142.0 11.8 154 1-164 36-198 (217)
43 2wim_A N-CAM 2, NCAM2, neural 99.9 1.3E-24 4.3E-29 143.4 16.1 151 1-167 125-279 (291)
44 1ry7_B FGFR-3, fibroblast grow 99.9 6.7E-26 2.3E-30 152.3 10.1 160 1-167 150-322 (334)
45 3bp6_B Programmed cell death 1 99.9 1.9E-24 6.5E-29 135.8 15.9 150 4-167 37-188 (202)
46 3k0w_A Mucosa-associated lymph 99.9 9E-24 3.1E-28 134.3 18.8 141 1-162 45-191 (218)
47 3b5h_A Cervical EMMPRIN, HAB18 99.9 1.6E-23 5.4E-28 129.7 19.5 143 2-167 26-178 (184)
48 2fbo_J V1V2;, variable region- 99.9 6.8E-25 2.3E-29 141.9 13.2 127 32-166 90-246 (250)
49 1qz1_A Neural cell adhesion mo 99.9 8.8E-24 3E-28 139.4 17.8 147 2-160 31-179 (291)
50 4dep_C Interleukin-1 receptor 99.9 5E-25 1.7E-29 148.9 11.6 157 1-167 152-328 (349)
51 1e07_A Carcinoembryonic antige 99.9 6.9E-24 2.3E-28 153.5 17.6 141 2-167 494-635 (642)
52 2x1w_L Vascular endothelial gr 99.9 4.4E-24 1.5E-28 135.3 14.6 153 2-167 36-202 (213)
53 3o4o_C Interleukin-1 receptor 99.9 3.4E-25 1.2E-29 149.2 9.7 158 1-167 152-330 (339)
54 3r4d_A CEA-related cell adhesi 99.9 2.1E-23 7.2E-28 131.5 17.4 145 2-163 27-190 (208)
55 2o26_X MAST/stem cell growth f 99.9 8.3E-24 2.9E-28 139.6 15.9 154 2-167 118-283 (290)
56 2v9r_A Roundabout homolog 1; p 99.9 2.2E-24 7.4E-29 136.3 11.5 150 1-163 36-192 (212)
57 4fqp_A Poliovirus receptor; im 99.9 2.5E-23 8.4E-28 138.8 17.1 149 1-168 145-300 (313)
58 1nbq_A JAM, junctional adhesio 99.9 4.9E-25 1.7E-29 138.9 8.3 146 1-162 31-197 (209)
59 3jz7_A MCAR, CAR, coxsackievir 99.9 4.1E-24 1.4E-28 135.0 12.4 151 3-168 33-208 (214)
60 3ejj_X Macrophage colony-stimu 99.9 3.2E-23 1.1E-27 136.6 17.1 151 5-167 121-276 (289)
61 3qs7_E FL cytokine receptor; i 99.9 1.4E-23 4.9E-28 145.2 15.7 149 2-168 256-410 (423)
62 2y25_A Myomesin; structural pr 99.9 4.9E-25 1.7E-29 147.0 8.0 151 2-167 35-195 (317)
63 2ec8_A MAST/stem cell growth f 99.9 2.8E-23 9.6E-28 147.2 17.1 157 1-167 238-406 (524)
64 3mj8_L Stimulatory hamster ant 99.9 2.9E-23 9.9E-28 131.3 15.0 159 1-167 27-208 (213)
65 4fom_A Poliovirus receptor-rel 99.9 2.7E-25 9.4E-30 147.9 5.9 150 1-168 142-296 (308)
66 3laf_A Deleted in colorectal c 99.9 6.8E-23 2.3E-27 140.7 17.8 156 1-167 148-306 (403)
67 3qs9_E FL cytokine receptor; i 99.9 1.4E-23 4.8E-28 148.7 14.6 149 1-167 255-409 (527)
68 2ifg_A High affinity nerve gro 99.9 4.5E-24 1.5E-28 144.4 11.3 149 1-168 185-341 (347)
69 3p2t_A Leukocyte immunoglobuli 99.9 2E-23 7E-28 130.6 13.5 146 2-160 31-179 (196)
70 3dmk_A DOWN syndrome cell adhe 99.9 1.9E-23 6.4E-28 154.7 14.4 149 3-167 649-804 (816)
71 1ugn_A LIR1, leukocyte immunog 99.9 1.4E-23 4.9E-28 131.5 11.6 144 4-160 33-181 (198)
72 3s96_B 3B5H10 FAB light chain; 99.9 6.2E-23 2.1E-27 130.2 14.1 158 2-167 29-215 (218)
73 3u83_A Poliovirus receptor-rel 99.9 9.1E-23 3.1E-27 136.8 15.6 145 1-167 163-315 (331)
74 1jbj_A CD3 epsilon and gamma e 99.9 4E-24 1.4E-28 132.9 8.1 139 3-162 26-179 (186)
75 2ny1_B T-cell surface glycopro 99.9 2.4E-23 8.1E-28 129.0 11.6 138 1-167 22-174 (184)
76 3sgj_C Human FCG3A receptor; r 99.9 7.9E-23 2.7E-27 128.7 13.7 124 2-159 35-160 (204)
77 4f80_A Butyrophilin subfamily 99.9 3.5E-22 1.2E-26 127.5 16.3 126 29-167 80-208 (226)
78 2d3v_A Leukocyte immunoglobuli 99.9 5.9E-23 2E-27 128.5 12.3 144 4-160 33-180 (196)
79 3kld_A Contactin 4, axcam, BIG 99.9 1.4E-22 4.9E-27 138.7 14.7 154 2-166 131-288 (384)
80 1uct_A Immunoglobulin alpha FC 99.9 5.1E-23 1.7E-27 130.8 11.6 142 2-159 35-180 (218)
81 3d9a_L Light chain of hyhel10 99.9 3.6E-23 1.2E-27 130.9 10.8 153 1-162 28-203 (213)
82 2ghw_B Anti-SARS SCFV antibody 99.9 1.2E-21 4E-26 126.6 18.0 140 19-159 67-228 (247)
83 1dr9_A B7-1 (CD80), T lymphocy 99.9 4.3E-22 1.5E-26 124.9 15.5 152 2-167 26-196 (201)
84 2if7_A SLAM family member 6; N 99.9 4.2E-22 1.4E-26 124.4 15.3 141 2-167 27-187 (193)
85 3tv3_L PGT128 light chain, IG 99.9 4E-23 1.4E-27 130.5 10.6 158 2-167 26-206 (211)
86 1ry7_B FGFR-3, fibroblast grow 99.9 2.6E-24 9E-29 144.5 5.1 158 2-166 37-210 (334)
87 4dep_C Interleukin-1 receptor 99.9 2.8E-22 9.4E-27 135.5 14.8 145 2-162 46-204 (349)
88 3o4o_C Interleukin-1 receptor 99.9 7.9E-23 2.7E-27 137.6 12.0 145 1-160 52-204 (339)
89 2wim_A N-CAM 2, NCAM2, neural 99.9 4.6E-22 1.6E-26 131.2 15.4 144 4-161 33-178 (291)
90 1vca_A VCAM-D1,2, human vascul 99.9 1.3E-21 4.3E-26 123.0 16.7 144 1-161 28-179 (202)
91 1lk3_L 9D7 light chain; antige 99.9 1.9E-22 6.3E-27 127.4 12.5 151 2-161 28-201 (210)
92 3qs9_E FL cytokine receptor; i 99.9 3.4E-22 1.2E-26 141.7 14.9 143 1-168 353-506 (527)
93 3dmk_A DOWN syndrome cell adhe 99.9 2.1E-21 7.1E-26 143.9 19.7 146 1-166 370-520 (816)
94 2pet_A Lutheran blood group gl 99.9 6.9E-22 2.4E-26 126.3 15.0 118 33-158 78-211 (231)
95 4dkd_C Macrophage colony-stimu 99.9 4.2E-22 1.4E-26 131.4 14.2 152 4-167 120-276 (292)
96 3oq3_B IFN-alpha/beta binding 99.9 3.6E-22 1.2E-26 134.1 14.0 142 2-163 66-211 (329)
97 3sbw_C Programmed cell death 1 99.9 7.3E-22 2.5E-26 125.5 14.3 152 4-167 36-206 (222)
98 3nl4_L Antigen binding fragmen 99.9 9.5E-22 3.3E-26 124.4 14.7 146 2-156 29-198 (213)
99 2gi7_A GPVI protein; IG-like d 99.9 9.5E-22 3.2E-26 121.9 14.2 133 2-160 34-168 (184)
100 4frw_A Poliovirus receptor-rel 99.9 1.9E-22 6.4E-27 127.5 11.1 124 31-166 78-205 (218)
101 3rjd_A High affinity immunoglo 99.9 2.1E-21 7.3E-26 126.2 16.1 135 1-162 110-249 (262)
102 2zg1_A Sialic acid-binding IG- 99.9 2.6E-21 8.9E-26 122.4 16.1 149 2-167 35-210 (214)
103 1fnl_A Low affinity immunoglob 99.9 5.4E-22 1.8E-26 122.0 12.4 126 2-161 35-162 (175)
104 1q0x_L FAB 9B1, light chain; a 99.9 5.7E-22 1.9E-26 125.4 12.8 157 3-167 32-210 (212)
105 3juy_B 3B3 single chain varian 99.9 5E-21 1.7E-25 124.4 17.4 158 2-160 36-244 (256)
106 2xzc_L FAB A.17 light chain; i 99.9 4E-22 1.4E-26 126.4 12.0 151 3-162 31-205 (216)
107 1e07_A Carcinoembryonic antige 99.9 2.8E-21 9.6E-26 139.9 17.8 137 2-163 138-275 (642)
108 1hnf_A CD2; T lymphocyte adhes 99.9 1.7E-21 5.8E-26 120.4 14.2 134 2-166 29-175 (182)
109 1oll_A NK receptor; immune sys 99.9 3.5E-22 1.2E-26 124.2 11.0 141 2-159 30-172 (188)
110 3sob_L Antibody light chain; b 99.9 1.4E-21 4.7E-26 125.4 14.2 152 2-162 52-226 (237)
111 2rcj_C Light chain; immunoglob 99.9 1.6E-21 5.6E-26 138.1 15.6 157 1-165 27-207 (523)
112 1nqb_A Single-chain antibody f 99.9 6E-21 2.1E-25 124.1 17.0 147 2-159 30-219 (256)
113 1f2q_A High affinity immunoglo 99.9 1.8E-21 6.2E-26 119.8 13.6 123 5-161 36-159 (176)
114 3ry4_A Low affinity immunoglob 99.9 2.5E-21 8.6E-26 118.4 14.1 126 3-162 34-160 (170)
115 2ocw_A Polymeric-immunoglobuli 99.9 5E-21 1.7E-25 137.2 17.8 151 1-163 358-536 (585)
116 1qok_A MFE-23 recombinant anti 99.9 7.4E-21 2.5E-25 125.2 17.3 156 2-159 56-254 (282)
117 1nkr_A P58-CL42 KIR; inhibitor 99.9 1.7E-21 5.9E-26 122.3 13.5 144 2-158 34-183 (201)
118 1f3r_B FV antibody fragment; I 99.9 1.3E-21 4.5E-26 127.2 13.3 157 2-159 30-232 (257)
119 2p1y_A Bispecific alpha/beta T 99.9 5.2E-21 1.8E-25 122.9 16.0 158 1-159 26-222 (238)
120 2ec8_A MAST/stem cell growth f 99.9 1.2E-21 3.9E-26 138.9 13.8 154 2-167 142-304 (524)
121 4i0k_A CD276 antigen; immunogl 99.9 2.7E-22 9.2E-27 127.6 9.5 154 4-167 30-201 (222)
122 3r06_A Anti-mouse CD3epsilon a 99.9 1.2E-21 4.3E-26 123.8 12.2 151 2-161 29-202 (213)
123 3mj6_A Junctional adhesion mol 99.9 1.6E-21 5.5E-26 127.3 13.1 150 2-167 36-232 (268)
124 1wio_A CD4, T-cell surface gly 99.9 6.3E-22 2.1E-26 134.5 11.5 141 1-167 123-288 (363)
125 1ccz_A Protein (CD58); LFA-3, 99.9 3.3E-21 1.1E-25 118.1 13.6 135 2-168 22-167 (171)
126 1c1e_H Catalytic antibody 1E9 99.9 2.5E-21 8.5E-26 123.0 13.4 157 3-167 31-215 (219)
127 2ocw_A Polymeric-immunoglobuli 99.9 6.1E-21 2.1E-25 136.7 16.8 152 4-166 33-215 (585)
128 1cs6_A Axonin-1; neural cell a 99.9 6.4E-22 2.2E-26 135.1 11.0 145 1-160 34-182 (382)
129 1nfd_E H57 FAB; complex (immun 99.9 1.6E-22 5.5E-27 127.9 7.4 156 2-165 27-205 (212)
130 1q9r_B S25-2 FAB (IGG1K) heavy 99.9 8.2E-21 2.8E-25 120.9 15.1 139 20-166 68-217 (222)
131 3eow_R Poliovirus receptor; im 99.9 4.6E-22 1.6E-26 126.6 9.1 151 5-167 35-207 (221)
132 3uzq_A Anti-dengue MAB 4E11; d 99.9 4.5E-21 1.5E-25 124.4 13.9 139 20-159 67-230 (253)
133 2c1o_A IGK-C protein; FAB frag 99.9 1.1E-21 3.8E-26 127.2 11.0 151 3-162 72-245 (254)
134 3esu_F Antibody 14B7* light ch 99.9 2E-20 6.7E-25 121.1 16.7 155 1-157 31-231 (250)
135 3d9a_H Heavy chain of hyhel10 99.9 2.3E-21 7.7E-26 122.5 11.9 156 3-167 31-209 (210)
136 3umt_A SCFV heavy chain and li 99.9 1.3E-20 4.6E-25 122.3 15.8 139 20-159 68-231 (256)
137 2rcj_C Light chain; immunoglob 99.9 7.7E-21 2.6E-25 134.7 15.6 154 4-166 146-310 (523)
138 1itb_B Type 1 interleukin-1 re 99.9 3.3E-22 1.1E-26 133.3 7.9 143 3-162 35-189 (315)
139 1moe_A Anti-CEA MAB T84.66; an 99.9 3.9E-20 1.3E-24 119.0 17.4 149 3-157 34-219 (240)
140 3gkz_A Anti-methamphetamine si 99.9 3.5E-20 1.2E-24 120.4 17.1 157 2-159 38-235 (257)
141 1sy6_A T-cell surface glycopro 99.9 3.8E-22 1.3E-26 125.6 7.6 142 2-161 28-192 (204)
142 2dru_A Chimera of CD48 antigen 99.9 1.1E-20 3.8E-25 116.7 13.9 134 2-167 28-176 (180)
143 3v2a_R Vascular endothelial gr 99.9 1E-23 3.5E-28 155.1 0.0 156 1-167 576-751 (772)
144 3auv_A SC-DSFV derived from th 99.9 3.9E-20 1.3E-24 121.4 16.7 155 2-158 40-235 (276)
145 3pv7_A B7-H6, IG-like domain-c 99.9 3E-21 1E-25 124.8 11.2 120 31-162 81-214 (248)
146 3qs7_E FL cytokine receptor; i 99.9 8.7E-21 3E-25 131.3 13.9 143 1-163 75-218 (423)
147 1wio_A CD4, T-cell surface gly 99.9 2.8E-21 9.5E-26 131.3 11.2 124 1-159 208-351 (363)
148 3bkj_L WO2 IGG2A FAB fragment 99.9 2.4E-21 8.2E-26 125.6 10.3 150 3-161 68-240 (252)
149 2znx_A SCFV; fluorotryptohpan, 99.9 4E-20 1.4E-24 119.2 15.8 160 2-163 29-229 (242)
150 2wng_A Tyrosine-protein phosph 99.9 2.2E-20 7.4E-25 125.3 15.0 150 2-161 32-205 (327)
151 2j6e_L IGM, FAB light chain; a 99.9 9.8E-22 3.3E-26 126.0 8.1 154 5-166 52-229 (234)
152 3p3y_A Neurofascin; IG domains 99.9 5.8E-21 2E-25 131.1 12.5 157 1-167 144-306 (404)
153 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.9 3.5E-20 1.2E-24 120.4 15.4 159 2-162 31-236 (256)
154 3ux9_B SCFV antibody; five hel 99.9 1.4E-19 4.8E-24 117.5 18.1 155 2-159 32-236 (256)
155 3u83_A Poliovirus receptor-rel 99.9 2.2E-20 7.6E-25 125.2 14.2 156 2-168 46-226 (331)
156 3rjd_A High affinity immunoglo 99.9 4.7E-20 1.6E-24 119.8 15.2 130 2-165 29-160 (262)
157 4dzb_B Vbeta2 (MAIT T cell rec 99.9 5.7E-21 2E-25 123.3 10.7 156 2-161 29-220 (246)
158 3mjg_X Beta-type platelet-deri 99.9 4.8E-20 1.6E-24 121.5 15.4 147 1-167 121-273 (289)
159 3vh8_G Killer cell immunoglobu 99.9 1.2E-20 4.2E-25 126.0 12.6 146 2-160 145-296 (316)
160 1dee_B IGM RF 2A2; FAB-IBP com 99.8 3.9E-19 1.3E-23 113.3 18.2 142 19-168 65-223 (223)
161 1pz5_B Heavy chain of FAB (SYA 99.8 5.9E-20 2E-24 116.8 14.0 138 20-167 68-216 (220)
162 1p6f_A NKP46, natural cytotoxi 99.8 2.3E-20 7.8E-25 120.3 12.1 140 3-159 34-175 (242)
163 1bih_A Hemolin; insect immunit 99.8 3.4E-20 1.2E-24 127.0 13.7 156 1-163 128-297 (395)
164 2wng_A Tyrosine-protein phosph 99.8 8.1E-21 2.8E-25 127.3 10.3 146 5-162 150-309 (327)
165 1op3_H FAB 2G12, heavy chain; 99.8 1.4E-19 4.9E-24 115.4 15.6 156 3-166 31-219 (225)
166 1qgc_4 Protein (immunoglobulin 99.8 3.3E-20 1.1E-24 128.8 13.4 149 1-160 144-321 (438)
167 2fbj_H IGA-kappa J539 FAB (hea 99.8 1.5E-19 5.1E-24 115.0 15.0 137 19-163 65-212 (220)
168 1svz_A Immunoglobulin;, single 99.8 8E-20 2.7E-24 118.1 13.9 154 3-158 35-228 (247)
169 3knb_B Obscurin-like protein 1 99.8 3.8E-20 1.3E-24 104.8 10.7 89 78-167 12-100 (107)
170 1qgc_4 Protein (immunoglobulin 99.8 3.7E-20 1.3E-24 128.5 12.8 150 4-162 35-207 (438)
171 3bae_H WO2 IGG2A FAB fragment 99.8 1.3E-19 4.3E-24 115.9 14.2 139 20-167 67-221 (228)
172 1za6_B IGG heavy chain; immuno 99.8 1.8E-20 6.2E-25 126.6 10.8 153 2-162 30-207 (344)
173 4fom_A Poliovirus receptor-rel 99.8 4.3E-20 1.5E-24 122.8 12.4 153 2-163 28-199 (308)
174 3vh8_G Killer cell immunoglobu 99.8 5.3E-20 1.8E-24 122.9 12.6 143 3-161 51-199 (316)
175 2oz4_A Intercellular adhesion 99.8 1E-20 3.6E-25 123.4 8.1 132 2-168 124-260 (265)
176 3nl4_H Antigen binding fragmen 99.8 2E-19 6.7E-24 114.0 13.6 139 19-167 63-209 (215)
177 1mju_H Immunoglobulin MS6-12; 99.8 3.1E-19 1E-23 114.1 14.5 138 20-166 66-211 (227)
178 3knb_A Titin; IG-like, titin, 99.8 1.2E-19 4.3E-24 101.5 11.1 89 79-168 5-95 (100)
179 3bqu_C 3H6 FAB light chain; be 99.8 1.3E-21 4.6E-26 125.3 3.4 151 2-161 51-224 (233)
180 4ei6_B Vbeta16 XV19 type II na 99.8 9.1E-20 3.1E-24 117.6 11.9 156 1-160 28-218 (245)
181 3q5y_A TCR N15 beta; IG, T cel 99.8 3.8E-19 1.3E-23 114.4 14.8 155 2-160 29-212 (240)
182 3pl6_D MBP peptide / T-cell re 99.8 4.7E-20 1.6E-24 120.5 10.7 138 20-161 88-241 (268)
183 2gki_A Nuclease; anti-DNA anti 99.8 2.5E-19 8.7E-24 118.4 14.3 139 20-159 88-258 (291)
184 1b6u_A KIR2DL3, P58 killer cel 99.8 9.3E-20 3.2E-24 118.4 11.6 144 2-158 33-182 (257)
185 2v5m_A Dscam; neurobiology SPL 99.8 7.3E-20 2.5E-24 125.2 11.4 142 1-160 31-189 (388)
186 4fmk_A Poliovirus receptor-rel 99.8 6.3E-20 2.2E-24 116.4 10.4 122 31-163 82-208 (225)
187 3m8o_H Immunoglobulin A1 heavy 99.8 1.2E-18 4.1E-23 110.8 15.6 135 20-163 68-214 (221)
188 2gjj_A A21 single-chain antibo 99.8 6.4E-19 2.2E-23 115.0 14.7 154 3-158 40-239 (264)
189 3liz_H 4C3 monoclonal antibody 99.8 7.3E-19 2.5E-23 114.0 14.8 140 20-167 66-215 (253)
190 3o3u_N Maltose-binding peripla 99.8 5.9E-19 2E-23 126.5 15.7 148 1-162 394-567 (581)
191 3nfj_J T cell receptor beta ch 99.8 7.7E-19 2.6E-23 113.3 14.2 157 1-161 28-219 (245)
192 2rgs_A I, IG gamma-2B heavy ch 99.8 3.4E-20 1.2E-24 117.8 7.7 150 4-161 45-205 (218)
193 1z7z_I Intercellular adhesion 99.8 1.4E-18 4.8E-23 121.0 16.4 147 1-166 113-276 (450)
194 1dn0_B IGM-kappa cold agglutin 99.8 6.9E-18 2.4E-22 108.1 18.4 141 19-167 64-222 (232)
195 3fku_X Neutralizing antibody F 99.8 5E-19 1.7E-23 116.4 13.3 138 20-159 66-234 (280)
196 2o26_X MAST/stem cell growth f 99.8 3.5E-19 1.2E-23 117.5 12.1 130 5-161 39-171 (290)
197 2vol_A Murine IGG FC; FC, zinc 99.8 1.3E-19 4.6E-24 114.2 9.6 151 4-161 37-197 (207)
198 3ejj_X Macrophage colony-stimu 99.8 2.2E-19 7.4E-24 118.3 11.0 138 5-162 31-171 (289)
199 1x9q_A SCFV, 4M5.3 anti-fluore 99.8 1.6E-18 5.6E-23 113.3 14.5 153 3-158 49-254 (268)
200 1c5d_H Monoclonal antibody aga 99.8 2.4E-18 8.1E-23 109.0 14.8 155 3-167 31-211 (215)
201 2wqr_A IG epsilon chain C regi 99.8 4.4E-20 1.5E-24 123.6 6.9 153 1-161 37-203 (323)
202 1z7z_I Intercellular adhesion 99.8 2.2E-19 7.6E-24 125.0 10.3 134 2-161 26-167 (450)
203 3mtr_A N-CAM-1, NCAM-1, neural 99.8 8.6E-19 2.9E-23 111.0 11.5 145 1-163 45-200 (215)
204 2xqy_G A13-D6.3 monoclonal ant 99.8 2.8E-18 9.5E-23 111.8 14.2 154 3-165 37-218 (261)
205 3omz_A Human vdelta1 gamma del 99.8 9.5E-19 3.3E-23 113.8 11.7 128 29-157 76-230 (259)
206 4fqp_A Poliovirus receptor; im 99.8 1.2E-18 4E-23 116.2 12.3 147 5-162 36-203 (313)
207 1hzh_H IGG, immunoglobulin hea 99.8 3.6E-18 1.2E-22 119.3 15.2 137 19-163 65-220 (457)
208 1igt_B IGG2A intact antibody - 99.8 2.7E-19 9.1E-24 124.6 9.4 151 3-160 273-433 (444)
209 2oz4_A Intercellular adhesion 99.8 2.8E-18 9.4E-23 111.9 13.6 132 1-163 31-170 (265)
210 1igt_B IGG2A intact antibody - 99.8 4.5E-18 1.5E-22 118.4 15.5 136 20-163 66-210 (444)
211 2wqr_A IG epsilon chain C regi 99.8 6.6E-19 2.3E-23 117.9 10.6 152 2-161 142-309 (323)
212 2wbj_D OB TCR; transmembrane, 99.8 1.5E-18 5.3E-23 114.0 11.5 156 2-161 52-245 (279)
213 3v2a_R Vascular endothelial gr 99.8 1.2E-17 4.2E-22 123.0 17.1 153 2-166 155-320 (772)
214 1i1c_A IGG2A, IG gamma-2A chai 99.8 6.2E-19 2.1E-23 113.4 9.0 154 1-161 47-211 (239)
215 3qib_D 2B4 beta chain; IG doma 99.8 4.9E-19 1.7E-23 115.8 8.7 137 21-161 90-244 (270)
216 3qp3_A Titin; I-SET IG-like, s 99.8 7.4E-18 2.5E-22 94.7 12.1 89 78-167 7-95 (103)
217 2cqv_A MLCK, myosin light chai 99.8 9.9E-18 3.4E-22 96.0 12.6 89 78-167 6-94 (114)
218 1bec_A 14.3.D T cell antigen r 99.8 9.1E-18 3.1E-22 107.9 13.5 155 2-160 26-211 (238)
219 1hxm_B Gamma-delta T-cell rece 99.8 3.9E-18 1.3E-22 109.9 11.4 155 2-162 31-219 (242)
220 3bn9_D E2 FAB heavy chain; ant 99.8 1.2E-18 4E-23 113.2 9.0 136 19-163 65-221 (257)
221 1igy_B IGG1 intact antibody MA 99.8 8.6E-19 2.9E-23 121.7 8.2 154 2-163 29-206 (434)
222 1l6x_A Immunoglobulin gamma-1 99.8 1.3E-18 4.3E-23 109.7 7.6 151 3-161 36-197 (207)
223 4dkd_C Macrophage colony-stimu 99.8 8.5E-19 2.9E-23 115.6 7.1 136 6-162 32-170 (292)
224 1gsm_A Madcam-1, mucosal addre 99.8 8.9E-17 3E-21 100.8 15.8 138 2-159 34-192 (210)
225 2nzi_A Titin; IG-domain, FNIII 99.8 5.9E-17 2E-21 107.4 15.8 136 1-163 131-281 (305)
226 3puc_A Titin; I-SET IG-like do 99.8 2.7E-17 9.4E-22 91.7 11.9 88 79-167 6-93 (99)
227 2w59_A IGY FCU3-4; immunoglobu 99.8 1.7E-18 5.9E-23 110.9 7.7 151 1-161 41-217 (231)
228 3qhz_H Human monoclonal antibo 99.8 2E-17 6.9E-22 105.9 12.6 139 20-167 70-224 (232)
229 1g1c_A Immunoglobulin-like dom 99.8 3.7E-17 1.3E-21 91.2 11.9 88 79-167 5-93 (99)
230 1wit_A Twitchin 18TH IGSF modu 99.8 1.9E-17 6.6E-22 91.4 9.9 87 79-168 2-90 (93)
231 3u2s_H PG9 heavy chain; greek 99.7 1.2E-16 4.2E-21 103.3 14.7 139 19-166 64-232 (248)
232 3tv3_H PGT128 heavy chain, IG 99.7 1.1E-16 3.6E-21 103.0 14.1 138 20-166 73-231 (239)
233 2bk8_A Connectin, M1, titin he 99.7 1.4E-16 4.7E-21 88.5 12.8 80 88-167 9-89 (97)
234 1waa_A Titin; metal binding pr 99.7 6.4E-17 2.2E-21 89.1 11.1 87 78-166 4-90 (93)
235 3irg_A Titin; IG-like, titin, 99.7 6.6E-17 2.3E-21 90.2 10.8 88 79-167 5-94 (100)
236 3irg_B Obscurin-like protein 1 99.7 6.2E-17 2.1E-21 91.5 10.7 89 78-167 12-100 (107)
237 1nct_A Titin; cell adhesion, g 99.7 1.6E-17 5.4E-22 93.9 8.2 90 77-167 12-101 (106)
238 2yuz_A Myosin-binding protein 99.7 4.8E-17 1.6E-21 90.9 10.0 87 78-167 6-92 (100)
239 1u2h_A APEG-1, aortic preferen 99.7 7.4E-17 2.5E-21 90.0 10.7 88 79-167 5-93 (99)
240 1oga_E TRBC1, T-cell receptor 99.7 1.5E-17 5E-22 107.8 8.8 156 2-161 30-218 (252)
241 1iga_A IGA1; immunoglobulin; N 99.7 3.6E-16 1.2E-20 109.7 16.4 135 19-161 66-215 (475)
242 2e7c_A Myosin-binding protein 99.7 1.4E-16 4.7E-21 91.7 11.9 79 88-167 32-110 (118)
243 1ypz_F T-cell receptor gamma c 99.7 3.1E-17 1.1E-21 105.0 9.7 140 19-161 65-216 (230)
244 2kdg_A Myotilin; immonoglobuli 99.7 5.3E-17 1.8E-21 90.7 9.5 88 79-167 5-93 (100)
245 1iga_A IGA1; immunoglobulin; N 99.7 1.3E-16 4.3E-21 112.1 12.8 123 32-161 309-443 (475)
246 3n9g_H FAB fragment of MAB CR4 99.7 2.4E-16 8.1E-21 100.8 12.9 136 20-166 66-219 (230)
247 1za6_B IGG heavy chain; immuno 99.7 1.5E-17 5E-22 112.3 7.6 152 2-161 149-330 (344)
248 3to4_D NKT vbeta2 (mouse varia 99.7 1.1E-16 3.9E-21 103.7 11.4 133 21-159 65-217 (253)
249 3knb_B Obscurin-like protein 1 99.7 6.4E-17 2.2E-21 91.4 8.8 66 1-68 40-105 (107)
250 2aty_A Complement receptor chi 99.7 1.8E-16 6.2E-21 108.3 12.6 149 5-160 203-361 (376)
251 2lu7_A Obscurin-like protein 1 99.7 5.8E-17 2E-21 87.5 8.2 78 88-166 4-81 (84)
252 1gxe_A Myosin binding protein 99.7 8.2E-17 2.8E-21 95.0 9.2 81 88-168 26-135 (139)
253 2lvc_A Obscurin-like protein 1 99.7 6.8E-17 2.3E-21 88.6 7.6 70 90-160 16-85 (91)
254 1hzh_H IGG, immunoglobulin hea 99.7 9.1E-17 3.1E-21 112.2 9.6 149 5-161 284-443 (457)
255 2dm2_A Palladin; beta-sandwich 99.7 2.9E-16 9.8E-21 89.2 9.9 88 78-166 7-96 (110)
256 1he7_A High affinity nerve gro 99.7 4.4E-16 1.5E-20 89.7 10.5 74 94-167 14-94 (126)
257 2dlt_A Myosin binding protein 99.7 4E-16 1.4E-20 88.1 10.3 88 77-166 6-93 (106)
258 2yr3_A Myosin light chain kina 99.7 2.2E-16 7.6E-21 88.0 9.1 85 78-166 10-94 (99)
259 4acp_A IG gamma-1 chain C regi 99.7 6.1E-17 2.1E-21 104.1 7.4 149 4-160 58-217 (240)
260 2edj_A Roundabout homolog 2; K 99.7 3.5E-16 1.2E-20 87.4 9.5 86 77-166 6-92 (100)
261 3mlr_H Human monoclonal anti-H 99.7 1.4E-15 4.9E-20 97.0 13.3 136 20-166 66-220 (226)
262 2kkq_A Myotilin; unknown funct 99.7 3.5E-16 1.2E-20 89.7 9.3 89 78-167 14-104 (116)
263 3mjg_X Beta-type platelet-deri 99.7 1.9E-16 6.4E-21 104.3 9.2 138 6-162 28-167 (289)
264 2ckn_A Basic fibroblast growth 99.7 1.7E-16 5.8E-21 87.9 7.5 84 78-167 8-91 (95)
265 1igy_B IGG1 intact antibody MA 99.7 2.3E-18 7.8E-23 119.6 -0.4 154 1-162 147-321 (434)
266 3sob_H Antibody heavy chain, l 99.7 2.1E-15 7.2E-20 97.9 13.5 137 19-166 88-245 (256)
267 1fhg_A Telokin; immunoglobulin 99.7 1.7E-15 5.7E-20 91.2 12.0 89 78-167 40-129 (154)
268 2dm3_A KIAA0992 protein, palla 99.7 2.8E-16 9.4E-21 89.3 7.8 88 78-166 8-96 (110)
269 3knb_A Titin; IG-like, titin, 99.7 7.6E-16 2.6E-20 86.0 9.3 66 1-67 32-98 (100)
270 3kvq_A Vascular endothelial gr 99.7 2.4E-16 8.4E-21 89.2 7.4 86 79-167 10-95 (108)
271 2e6p_A Obscurin-like protein 1 99.7 1.6E-15 5.4E-20 85.3 10.5 87 79-166 7-95 (104)
272 3cx2_A Myosin-binding protein 99.7 1.7E-15 5.7E-20 85.8 10.6 89 79-168 4-104 (108)
273 2edf_A Obscurin; beta-sandwich 99.7 1.3E-15 4.3E-20 85.5 9.8 80 77-158 6-85 (103)
274 3caf_A Fibroblast growth facto 99.7 1.9E-16 6.5E-21 88.4 6.0 80 88-167 16-96 (100)
275 1zvo_C Myeloma immunoglobulin 99.7 6.6E-15 2.3E-19 104.3 15.2 159 1-162 163-387 (512)
276 2c1o_A IGK-C protein; FAB frag 99.7 1.2E-15 4.3E-20 98.7 10.6 108 39-160 11-137 (254)
277 1x44_A Myosin-binding protein 99.7 1.5E-15 5E-20 85.3 9.3 77 79-157 7-85 (103)
278 1wwb_X Protein (brain derived 99.7 2.8E-15 9.6E-20 84.1 10.3 76 93-168 14-94 (103)
279 1zvo_C Myeloma immunoglobulin 99.7 1.8E-14 6.3E-19 102.1 16.9 149 4-161 329-492 (512)
280 2eny_A Obscurin; beta-sandwich 99.7 9.1E-16 3.1E-20 86.3 8.3 84 78-162 7-91 (104)
281 2eo9_A Roundabout homolog 1; b 99.6 1.2E-15 4.3E-20 87.7 8.9 85 78-166 7-92 (118)
282 2jll_A NCAM2, neural cell adhe 99.6 7.5E-14 2.6E-18 95.4 19.1 146 1-163 127-279 (389)
283 2edn_A Myosin-binding protein 99.6 2.6E-15 8.8E-20 85.7 9.8 90 78-168 11-112 (118)
284 3iu4_H CHP3 FAB heavy chain; a 99.6 3.1E-15 1.1E-19 97.5 11.5 137 19-166 64-218 (263)
285 1pd6_A Cardiac MYBP-C;, myosin 99.6 3.4E-15 1.2E-19 83.9 9.6 85 77-162 13-98 (104)
286 2edk_A Myosin-binding protein 99.6 9.4E-16 3.2E-20 85.8 7.2 83 77-161 6-92 (101)
287 2cry_A KIN of IRRE-like protei 99.6 1.2E-16 4.1E-21 92.5 3.5 89 78-168 13-109 (122)
288 2dav_A SLOW MYBP-C, myosin-bin 99.6 5.5E-16 1.9E-20 89.4 6.3 87 80-167 8-106 (126)
289 2yuv_A Myosin-binding protein 99.6 1.2E-14 4.2E-19 81.1 11.2 77 78-155 6-82 (100)
290 1wwc_A Protein (NT-3 growth fa 99.6 4.5E-15 1.5E-19 85.3 9.7 72 96-167 21-96 (118)
291 1ow0_A IG alpha-1 chain C regi 99.6 8.4E-17 2.9E-21 101.9 2.3 123 31-160 65-199 (214)
292 2yuz_A Myosin-binding protein 99.6 5.7E-15 2E-19 82.4 9.3 65 1-69 32-96 (100)
293 1he7_A High affinity nerve gro 99.6 3.4E-15 1.2E-19 86.0 8.4 68 1-69 27-100 (126)
294 1ypz_E T cell receptor delta, 99.6 1.3E-14 4.4E-19 91.4 11.6 145 4-163 30-200 (207)
295 3bfo_A Mucosa-associated lymph 99.6 1.5E-14 5.2E-19 79.3 10.5 74 80-163 4-77 (91)
296 2v5y_A Receptor-type tyrosine- 99.6 8.1E-15 2.8E-19 107.8 12.2 142 1-161 103-248 (731)
297 2k1m_A Myosin-binding protein 99.6 1.7E-14 5.8E-19 79.7 10.4 76 80-157 9-84 (95)
298 2edh_A Obscurin; structural ge 99.6 9.7E-15 3.3E-19 83.3 9.4 75 78-155 18-92 (113)
299 1gl4_B Basement membrane-speci 99.6 1.5E-14 5.1E-19 80.4 9.4 84 79-167 9-93 (98)
300 2lu7_A Obscurin-like protein 1 99.6 7.2E-15 2.5E-19 79.2 7.9 59 2-66 23-81 (84)
301 2cqv_A MLCK, myosin light chai 99.6 2.6E-14 9E-19 81.6 10.6 68 1-70 34-101 (114)
302 2kkq_A Myotilin; unknown funct 99.6 2.6E-14 8.9E-19 81.9 10.3 70 1-70 42-111 (116)
303 2e7b_A Obscurin; IG-like domai 99.6 3.3E-14 1.1E-18 79.7 10.1 79 78-158 7-85 (103)
304 3s35_X Vascular endothelial gr 99.6 5.9E-14 2E-18 81.0 11.3 83 85-167 13-105 (122)
305 3qp3_A Titin; I-SET IG-like, s 99.6 3.9E-14 1.3E-18 79.3 10.1 65 1-67 35-99 (103)
306 1g1c_A Immunoglobulin-like dom 99.6 3.5E-14 1.2E-18 78.9 9.8 66 1-67 32-97 (99)
307 2cr3_A Basic fibroblast growth 99.6 6.2E-15 2.1E-19 82.1 6.7 75 88-167 11-85 (99)
308 1u2h_A APEG-1, aortic preferen 99.6 2.6E-14 8.9E-19 79.5 9.2 66 1-67 32-97 (99)
309 2dm7_A KIAA1556 protein; beta- 99.6 2.8E-14 9.7E-19 80.7 9.2 81 77-160 6-86 (108)
310 2v9t_A Roundabout homolog 1; s 99.6 9.2E-15 3.1E-19 83.9 7.2 85 78-163 8-99 (117)
311 2e6q_A Obscurin-like protein 1 99.6 8.3E-14 2.8E-18 78.9 10.9 78 78-158 7-94 (112)
312 2cpc_A KIAA0657 protein; immun 99.6 8.9E-14 3E-18 79.2 11.2 67 90-157 23-89 (113)
313 3so5_A LIG-3, leucine-rich rep 99.6 6.3E-14 2.2E-18 79.5 10.6 84 78-162 9-102 (112)
314 1gxe_A Myosin binding protein 99.6 2.7E-14 9.1E-19 84.2 9.1 65 1-66 45-137 (139)
315 2e7c_A Myosin-binding protein 99.6 5.8E-14 2E-18 80.6 10.4 65 1-68 51-115 (118)
316 2kdg_A Myotilin; immonoglobuli 99.6 5.5E-14 1.9E-18 78.3 10.0 66 1-67 32-97 (100)
317 3lcy_A Titin; A-BAND, IG tande 99.6 1E-13 3.4E-18 86.2 12.0 88 78-166 6-93 (197)
318 3mtr_A N-CAM-1, NCAM-1, neural 99.6 8.7E-14 3E-18 87.9 11.8 87 79-167 19-107 (215)
319 3u1s_H FAB PGT145 heavy chain; 99.6 1.3E-13 4.4E-18 90.1 12.9 134 20-164 89-257 (267)
320 3shs_A HOC head outer capsid p 99.6 1.3E-12 4.5E-17 83.7 16.9 127 3-160 35-169 (304)
321 2bk8_A Connectin, M1, titin he 99.6 8.4E-14 2.9E-18 77.2 10.2 63 2-66 30-92 (97)
322 2dm2_A Palladin; beta-sandwich 99.6 2.3E-14 8E-19 81.3 8.1 70 1-70 35-104 (110)
323 1wwb_X Protein (brain derived 99.6 1.6E-14 5.5E-19 81.0 7.2 66 1-67 28-97 (103)
324 3puc_A Titin; I-SET IG-like do 99.6 7.7E-14 2.6E-18 77.5 9.9 65 1-67 33-97 (99)
325 4hwu_A Fibroblast growth facto 99.5 3.8E-14 1.3E-18 78.3 7.9 74 88-167 9-82 (95)
326 3qr2_A Basigin; CD147, EMMPRIN 99.5 4.4E-14 1.5E-18 83.2 8.7 85 77-162 19-116 (137)
327 3irg_B Obscurin-like protein 1 99.5 5.9E-14 2E-18 79.1 8.8 66 1-68 40-105 (107)
328 3f8u_B Tapasin; endoplasmic re 99.5 4.6E-13 1.6E-17 91.1 14.5 129 30-168 252-400 (401)
329 2cr6_A KIAA1556 protein, obscu 99.5 2.2E-14 7.5E-19 82.1 7.0 80 79-159 13-93 (115)
330 2a38_A Titin; Z1Z2, structural 99.5 1.5E-13 5.1E-18 85.3 11.2 87 79-166 5-93 (194)
331 2yd1_A Tyrosine-protein phosph 99.5 4.2E-13 1.4E-17 84.5 13.4 84 77-161 4-90 (212)
332 2dku_A KIAA1556 protein; beta- 99.5 1E-13 3.5E-18 77.7 9.3 75 78-154 7-81 (103)
333 2j8h_A Titin, connectin; cardi 99.5 5E-13 1.7E-17 83.1 13.0 88 78-166 3-92 (197)
334 2eo1_A OBSCN protein, cDNA FLJ 99.5 1E-13 3.4E-18 77.6 8.6 75 88-163 19-93 (102)
335 1waa_A Titin; metal binding pr 99.5 1.2E-13 4.1E-18 75.9 8.5 60 2-67 32-91 (93)
336 3uto_A Twitchin; kinase, muscl 99.5 3.3E-13 1.1E-17 96.7 12.9 90 78-168 481-570 (573)
337 3m45_A Cell adhesion molecule 99.5 2.5E-13 8.6E-18 76.6 9.9 83 82-166 9-100 (108)
338 2lvc_A Obscurin-like protein 1 99.5 4E-14 1.4E-18 77.4 6.3 51 2-54 33-83 (91)
339 1fhg_A Telokin; immunoglobulin 99.5 2.9E-13 1E-17 81.3 10.4 68 1-69 68-135 (154)
340 2yd6_A PTPRD protein; hydrolas 99.5 6.6E-13 2.2E-17 83.7 12.0 88 78-166 5-94 (212)
341 1wwc_A Protein (NT-3 growth fa 99.5 1.5E-13 5.1E-18 78.9 8.2 67 1-68 32-101 (118)
342 3irg_A Titin; IG-like, titin, 99.5 3.5E-13 1.2E-17 74.9 9.1 66 1-67 32-98 (100)
343 2ens_A Advanced glycosylation 99.5 2.1E-14 7.1E-19 79.5 4.0 73 79-161 10-82 (96)
344 1wit_A Twitchin 18TH IGSF modu 99.5 2.6E-13 8.8E-18 74.6 8.3 62 1-66 29-92 (93)
345 2eo9_A Roundabout homolog 1; b 99.5 1.6E-13 5.4E-18 78.8 7.4 65 1-69 35-99 (118)
346 3rbg_A Cytotoxic and regulator 99.5 6.3E-13 2.1E-17 77.0 9.9 79 88-167 9-96 (124)
347 1hxm_A Gamma-delta T-cell rece 99.5 2.4E-12 8.3E-17 82.2 13.5 143 4-162 33-200 (229)
348 1nct_A Titin; cell adhesion, g 99.5 6.9E-14 2.4E-18 78.8 5.7 64 1-66 41-104 (106)
349 2dm3_A KIAA0992 protein, palla 99.5 9E-14 3.1E-18 78.8 6.0 69 1-70 36-104 (110)
350 2edj_A Roundabout homolog 2; K 99.5 1.6E-13 5.4E-18 76.5 6.5 63 1-67 35-97 (100)
351 2dav_A SLOW MYBP-C, myosin-bin 99.5 5.5E-14 1.9E-18 81.0 4.7 68 1-68 37-111 (126)
352 2edn_A Myosin-binding protein 99.5 3.2E-13 1.1E-17 77.0 7.8 67 1-67 42-115 (118)
353 1iam_A ICAM-1, CD54, intercell 99.5 1.9E-12 6.6E-17 79.6 11.5 114 32-160 50-166 (185)
354 2va4_A NCAM2, N-CAM 2, neural 99.5 1.2E-12 4.2E-17 80.9 10.6 86 79-166 2-88 (192)
355 2c5d_C AXL oncogene, tyrosine- 99.4 1.6E-12 5.5E-17 80.8 10.8 83 79-162 2-94 (195)
356 2ckn_A Basic fibroblast growth 99.4 7E-13 2.4E-17 73.1 8.0 58 2-66 37-94 (95)
357 2yuv_A Myosin-binding protein 99.4 8.4E-13 2.9E-17 73.5 8.0 62 1-68 34-95 (100)
358 1z9m_A GAPA225; nectin-like, I 99.4 1.3E-12 4.3E-17 77.7 9.2 77 88-166 46-132 (145)
359 3kvq_A Vascular endothelial gr 99.4 7.6E-13 2.6E-17 74.7 7.5 65 1-69 37-101 (108)
360 2xot_A Amphoterin-induced prot 99.4 9.7E-13 3.3E-17 89.5 9.3 85 2-113 273-360 (361)
361 4hwu_A Fibroblast growth facto 99.4 1.9E-12 6.5E-17 71.3 8.8 61 2-68 27-87 (95)
362 2v44_A NCAM2, neural cell adhe 99.4 6.6E-12 2.3E-16 77.5 12.2 74 88-162 10-84 (189)
363 2yr3_A Myosin light chain kina 99.4 8.2E-13 2.8E-17 73.4 6.9 61 1-66 38-98 (99)
364 2cpc_A KIAA0657 protein; immun 99.4 2E-12 6.8E-17 73.5 8.5 62 1-68 39-100 (113)
365 1x44_A Myosin-binding protein 99.4 2.4E-12 8.3E-17 72.0 8.5 63 2-69 34-97 (103)
366 3caf_A Fibroblast growth facto 99.4 4.3E-13 1.5E-17 74.6 5.3 63 1-66 35-99 (100)
367 2cr3_A Basic fibroblast growth 99.4 1.7E-12 5.7E-17 72.2 7.7 58 4-67 32-89 (99)
368 2k1m_A Myosin-binding protein 99.4 2.3E-12 7.9E-17 71.0 8.1 60 1-66 34-93 (95)
369 4fa8_A Secreted protein BARF1; 99.4 1E-12 3.5E-17 82.4 7.4 79 89-167 2-100 (203)
370 1ntl_A CRRY-IG; immunology, co 99.4 1.9E-11 6.4E-16 87.5 14.7 147 4-160 377-536 (551)
371 1rhf_A Tyrosine-protein kinase 99.4 3.2E-12 1.1E-16 78.5 9.4 79 82-161 5-85 (182)
372 1epf_A NCAM, protein (neural c 99.4 1.2E-11 4.2E-16 76.4 12.0 84 81-165 4-92 (191)
373 3rbs_A Myomesin-1; immunoglobu 99.4 4.9E-12 1.7E-16 79.6 10.2 71 89-159 11-84 (207)
374 1mq8_A ICAM-1, intercellular a 99.4 2.8E-13 9.6E-18 89.2 4.6 134 5-159 120-269 (291)
375 2edf_A Obscurin; beta-sandwich 99.4 2.4E-12 8.3E-17 72.0 7.7 61 2-68 35-95 (103)
376 2wv3_A Neuroplastin; igcam, me 99.4 8.6E-12 2.9E-16 77.2 10.7 80 79-166 3-85 (190)
377 2id5_A Lingo-1, leucine rich r 99.4 5.1E-13 1.7E-17 93.9 5.7 80 88-167 393-472 (477)
378 3bp6_B Programmed cell death 1 99.4 8E-12 2.7E-16 78.0 10.2 81 86-166 8-97 (202)
379 2eo1_A OBSCN protein, cDNA FLJ 99.4 5.9E-12 2E-16 70.2 8.6 61 1-67 37-97 (102)
380 1jhl_L IGG1-kappa D11.15 FV (l 99.4 1E-11 3.5E-16 70.1 9.7 72 88-159 9-94 (108)
381 1pd6_A Cardiac MYBP-C;, myosin 99.4 4.3E-12 1.5E-16 71.1 8.0 61 1-66 42-102 (104)
382 2e6p_A Obscurin-like protein 1 99.4 5.9E-12 2E-16 70.5 8.3 62 1-69 37-98 (104)
383 2r15_A Myomesin-1; sarcomeric 99.4 2.4E-11 8.3E-16 76.3 11.9 76 92-167 14-90 (212)
384 2dlt_A Myosin binding protein 99.4 4.7E-12 1.6E-16 71.2 7.6 61 2-67 36-96 (106)
385 2dku_A KIAA1556 protein; beta- 99.3 7.1E-12 2.4E-16 70.0 8.2 63 1-69 34-96 (103)
386 2edh_A Obscurin; structural ge 99.3 1.3E-11 4.5E-16 70.1 9.4 60 3-68 46-105 (113)
387 2iep_A Muscle-specific kinase 99.3 7E-12 2.4E-16 77.6 8.8 80 79-161 7-87 (192)
388 2eny_A Obscurin; beta-sandwich 99.3 2.3E-12 7.8E-17 72.3 5.7 60 4-69 39-98 (104)
389 1vca_A VCAM-D1,2, human vascul 99.3 2.9E-11 1E-15 75.7 11.4 78 85-166 6-84 (202)
390 3sgj_C Human FCG3A receptor; r 99.3 7.2E-12 2.5E-16 78.6 8.4 78 79-167 7-85 (204)
391 3ojm_B Fibroblast growth facto 99.3 1.9E-12 6.5E-17 82.3 5.8 79 88-166 27-106 (231)
392 3p2t_A Leukocyte immunoglobuli 99.3 7.6E-12 2.6E-16 77.9 8.4 78 79-160 5-82 (196)
393 2vr9_A Roundabout 1, ROBO; imm 99.3 6.6E-12 2.3E-16 79.2 8.1 85 77-162 7-95 (217)
394 3grw_A Fibroblast growth facto 99.3 5.4E-12 1.8E-16 80.8 7.6 79 88-166 23-102 (241)
395 3zyj_A Leucine-rich repeat-con 99.3 6.7E-12 2.3E-16 87.4 8.3 86 79-167 341-428 (440)
396 3khq_A B-cell antigen receptor 99.3 3.3E-11 1.1E-15 70.5 9.7 76 82-160 20-101 (133)
397 2edk_A Myosin-binding protein 99.3 3E-12 1E-16 71.4 5.1 59 4-67 37-98 (101)
398 2e6q_A Obscurin-like protein 1 99.3 2.2E-11 7.5E-16 68.9 8.4 63 3-69 35-106 (112)
399 3k0w_A Mucosa-associated lymph 99.3 2.1E-11 7.2E-16 77.1 9.3 74 79-162 18-91 (218)
400 2e7b_A Obscurin; IG-like domai 99.3 1.4E-11 4.8E-16 68.8 7.5 62 1-69 35-96 (103)
401 1fnl_A Low affinity immunoglob 99.3 1.6E-11 5.5E-16 75.1 8.1 78 79-167 7-85 (175)
402 3bfo_A Mucosa-associated lymph 99.3 2.3E-11 8E-16 66.4 8.0 55 1-66 30-85 (91)
403 3rbg_A Cytotoxic and regulator 99.3 1.8E-11 6.3E-16 70.7 7.9 69 1-70 28-103 (124)
404 2cr6_A KIAA1556 protein, obscu 99.3 6.2E-12 2.1E-16 71.8 5.8 64 1-69 40-103 (115)
405 3m45_A Cell adhesion molecule 99.3 2.3E-11 7.9E-16 68.4 7.9 67 1-68 33-106 (108)
406 2dm7_A KIAA1556 protein; beta- 99.3 4E-11 1.4E-15 67.5 8.7 61 2-68 34-94 (108)
407 3cx2_A Myosin-binding protein 99.3 3.3E-11 1.1E-15 67.9 8.3 64 4-67 37-107 (108)
408 2v5t_A NCAM2, N-CAM 2, neural 99.3 3.6E-11 1.2E-15 74.1 9.2 80 80-161 3-82 (189)
409 1gl4_B Basement membrane-speci 99.3 3E-11 1E-15 66.8 7.9 59 1-66 38-96 (98)
410 2d3v_A Leukocyte immunoglobuli 99.3 2.4E-11 8.2E-16 75.6 8.2 79 79-161 5-83 (196)
411 1pko_A Myelin oligodendrocyte 99.3 2.2E-10 7.5E-15 67.5 11.9 80 88-167 14-116 (139)
412 2e27_L Anti-ciguatoxin antibod 99.3 5.9E-11 2E-15 68.1 9.1 71 88-158 11-95 (119)
413 3uto_A Twitchin; kinase, muscl 99.3 4.2E-11 1.4E-15 85.9 10.1 64 1-66 509-572 (573)
414 2xot_A Amphoterin-induced prot 99.3 3.4E-11 1.2E-15 81.8 9.3 75 88-167 254-332 (361)
415 3r08_E T-cell surface glycopro 99.3 1.2E-12 4E-17 69.6 1.6 59 88-157 7-66 (82)
416 2q20_A VK1 O18/O8 germline lig 99.3 1.2E-10 4E-15 65.8 10.0 71 88-158 11-95 (109)
417 2v9r_A Roundabout homolog 1; p 99.3 2.5E-11 8.6E-16 76.1 7.9 63 1-68 139-202 (212)
418 1xau_A B- and T-lymphocyte att 99.3 2E-10 6.8E-15 63.2 10.0 76 88-163 22-106 (122)
419 1f97_A Junction adhesion molec 99.2 3E-11 1E-15 75.8 7.8 69 88-160 9-89 (212)
420 3nl4_L Antigen binding fragmen 99.2 6.6E-11 2.3E-15 74.4 9.4 73 88-160 9-95 (213)
421 1mqk_L Antibody 7E2 FV fragmen 99.2 8.1E-11 2.8E-15 67.6 8.9 72 88-159 9-94 (120)
422 1i8k_A Epidermal growth factor 99.2 8E-11 2.7E-15 66.3 8.7 71 88-158 9-93 (107)
423 3r06_A Anti-mouse CD3epsilon a 99.2 1.4E-10 4.6E-15 73.0 10.7 73 88-160 9-95 (213)
424 3mj8_L Stimulatory hamster ant 99.2 1E-10 3.5E-15 73.6 10.0 72 89-160 9-94 (213)
425 1qfw_M FV, antibody (anti beta 99.2 5.7E-11 2E-15 67.0 7.9 71 88-158 9-93 (108)
426 1f2q_A High affinity immunoglo 99.2 1.7E-11 5.8E-16 75.0 6.0 78 79-167 4-82 (176)
427 3s35_X Vascular endothelial gr 99.2 6.3E-11 2.2E-15 68.2 8.0 68 2-69 38-111 (122)
428 4f80_A Butyrophilin subfamily 99.2 2.6E-10 9E-15 72.4 11.6 82 86-167 10-114 (226)
429 3bn3_B ICAM-5, intercellular a 99.2 5.3E-11 1.8E-15 73.7 8.0 117 33-160 53-174 (196)
430 3qib_D 2B4 beta chain; IG doma 99.2 3.9E-11 1.3E-15 78.3 7.9 102 39-158 3-123 (270)
431 3d9a_L Light chain of hyhel10 99.2 1.7E-10 5.9E-15 72.5 10.5 74 88-161 9-96 (213)
432 4f9p_D 103.2 anti-BTN3A1 antib 99.2 2.9E-09 9.9E-14 67.3 15.7 138 19-158 65-229 (254)
433 3zyi_A Leucine-rich repeat-con 99.2 1E-11 3.5E-16 86.8 5.3 83 79-167 352-438 (452)
434 2ywz_A NEW antigen receptor va 99.2 3.4E-10 1.2E-14 64.1 10.4 70 88-157 8-87 (111)
435 3s97_C Contactin-1; carbonic a 99.2 1.6E-11 5.5E-16 76.4 5.2 78 86-163 14-93 (201)
436 2gi7_A GPVI protein; IG-like d 99.2 6.9E-11 2.4E-15 72.9 7.7 71 78-161 7-77 (184)
437 1z9m_A GAPA225; nectin-like, I 99.2 1.3E-10 4.4E-15 69.0 8.5 65 2-69 66-139 (145)
438 2cry_A KIN of IRRE-like protei 99.2 6.6E-12 2.2E-16 72.4 2.8 67 1-67 40-112 (122)
439 1h5b_A Murine T cell receptor 99.2 2.2E-10 7.5E-15 65.1 9.1 72 88-160 9-95 (113)
440 4hwn_A FC receptor-like A; FCR 99.2 1.4E-10 4.7E-15 65.4 7.9 73 78-160 7-84 (108)
441 1gsm_A Madcam-1, mucosal addre 99.2 4.9E-10 1.7E-14 70.3 11.0 73 88-166 15-89 (210)
442 3ry4_A Low affinity immunoglob 99.2 1.1E-10 3.7E-15 70.9 7.9 77 80-167 5-82 (170)
443 1mq8_A ICAM-1, intercellular a 99.2 1.9E-10 6.4E-15 75.8 9.5 113 33-160 51-166 (291)
444 1i3g_L Antibody FV fragment; a 99.2 2.4E-10 8.4E-15 64.7 8.8 71 88-158 12-96 (111)
445 3b5h_A Cervical EMMPRIN, HAB18 99.2 3.7E-10 1.3E-14 69.4 10.4 65 1-66 110-181 (184)
446 3so5_A LIG-3, leucine-rich rep 99.2 1.1E-10 3.9E-15 65.8 7.4 65 2-66 40-111 (112)
447 3s96_B 3B5H10 FAB light chain; 99.2 3.3E-10 1.1E-14 71.4 10.2 72 89-160 9-99 (218)
448 1lk3_L 9D7 light chain; antige 99.2 2.1E-10 7.2E-15 72.0 9.2 74 88-161 8-95 (210)
449 2vsd_A CHIR AB1; immune system 99.2 1.5E-10 5.3E-15 64.8 7.7 75 79-159 5-79 (105)
450 3sob_L Antibody light chain; b 99.2 5.4E-10 1.8E-14 71.3 11.1 73 88-160 32-118 (237)
451 1jbj_A CD3 epsilon and gamma e 99.2 5.1E-11 1.8E-15 73.6 6.1 65 91-166 10-75 (186)
452 2v9t_A Roundabout homolog 1; s 99.2 9.1E-11 3.1E-15 67.0 6.7 66 1-66 36-107 (117)
453 1j05_L T84.66 antibody, anti-C 99.2 1.8E-10 6.1E-15 65.2 7.4 71 88-158 9-97 (111)
454 2coq_A NEW antigen receptor va 99.2 5.1E-10 1.8E-14 63.0 9.2 70 88-157 8-87 (108)
455 1uct_A Immunoglobulin alpha FC 99.2 8.4E-11 2.9E-15 74.5 6.5 79 78-160 8-88 (218)
456 1nbq_A JAM, junctional adhesio 99.2 1.2E-10 4.2E-15 72.7 7.1 74 82-160 7-92 (209)
457 3esu_F Antibody 14B7* light ch 99.1 6.7E-10 2.3E-14 71.5 10.7 73 88-160 12-98 (250)
458 4gos_A V-SET domain-containing 99.1 2.5E-10 8.5E-15 66.1 7.8 81 88-168 13-116 (125)
459 2ens_A Advanced glycosylation 99.1 5.4E-11 1.9E-15 65.6 4.8 55 1-66 37-93 (96)
460 1eaj_A Coxsackie virus and ade 99.1 2.5E-10 8.4E-15 65.8 7.3 80 88-167 13-120 (126)
461 3moq_A NEW antigen receptor va 99.1 1.4E-09 4.7E-14 62.9 10.2 73 88-160 8-90 (126)
462 1q0x_L FAB 9B1, light chain; a 99.1 5.7E-10 2E-14 70.1 9.1 73 88-160 8-97 (212)
463 2ifg_A High affinity nerve gro 99.1 1.2E-10 4.2E-15 78.6 6.3 88 77-167 156-244 (347)
464 2znx_A SCFV; fluorotryptohpan, 99.1 6.4E-10 2.2E-14 71.4 9.4 73 88-160 9-95 (242)
465 1ugn_A LIR1, leukocyte immunog 99.1 5.3E-11 1.8E-15 74.1 4.2 78 78-159 4-81 (198)
466 3udw_C Poliovirus receptor; PV 99.1 4E-10 1.4E-14 64.2 7.6 78 89-166 9-110 (118)
467 3c6l_A TCR 2W20 alpha chain; T 98.7 6.9E-12 2.3E-16 77.4 0.0 137 4-154 30-182 (185)
468 1eeq_A Kappa-4 immunoglobulin 99.1 5.7E-10 1.9E-14 63.4 8.0 71 88-158 9-99 (114)
469 1moe_A Anti-CEA MAB T84.66; an 99.1 5.9E-10 2E-14 71.4 9.0 73 88-160 9-99 (240)
470 4ffy_L DENV1-E111 single chain 99.1 6.4E-10 2.2E-14 64.4 8.3 72 88-159 9-98 (126)
471 1hng_A CD2; T lymphocyte adhes 99.1 1.2E-10 4E-15 71.4 5.4 71 89-162 5-87 (176)
472 2qsq_A Carcinoembryonic antige 99.1 3.1E-10 1E-14 64.2 6.6 67 91-160 11-96 (111)
473 2fbo_J V1V2;, variable region- 99.1 2.8E-10 9.6E-15 73.1 7.2 75 86-161 8-115 (250)
474 3bkj_L WO2 IGG2A FAB fragment 99.1 1.2E-09 4E-14 70.6 10.0 73 88-160 42-133 (252)
475 3tv3_L PGT128 light chain, IG 99.1 5.8E-10 2E-14 70.0 8.4 70 89-160 9-92 (211)
476 1oll_A NK receptor; immune sys 99.1 5.4E-10 1.9E-14 69.1 8.1 78 79-160 4-81 (188)
477 4dzb_B Vbeta2 (MAIT T cell rec 99.1 1.4E-09 4.9E-14 69.8 10.2 73 88-160 9-101 (246)
478 1sq2_N Novel antigen receptor; 99.1 2.1E-09 7.1E-14 61.0 9.6 71 88-158 8-88 (113)
479 2eys_A NKT15; natural killer T 99.1 2.4E-09 8.1E-14 67.4 10.7 121 19-160 61-188 (210)
480 1dlf_L Anti-dansyl immunoglobu 99.1 1.6E-09 5.3E-14 61.5 8.9 71 88-158 9-98 (113)
481 1ncn_A T lymphocyte activation 99.1 4.3E-10 1.5E-14 63.5 6.5 74 89-164 3-97 (110)
482 2yc1_B Single chain antibody f 99.1 2.5E-09 8.5E-14 63.4 10.0 71 88-158 24-108 (146)
483 3auv_A SC-DSFV derived from th 99.1 1.8E-09 6.1E-14 70.7 10.2 78 82-160 15-106 (276)
484 3r4d_A CEA-related cell adhesi 99.1 4.5E-10 1.5E-14 70.3 7.1 61 3-67 138-199 (208)
485 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.1 1.6E-09 5.4E-14 70.2 9.6 73 88-160 11-100 (256)
486 3jz7_A MCAR, CAR, coxsackievir 99.1 3.7E-10 1.3E-14 70.8 6.4 79 88-166 8-114 (214)
487 4acp_A IG gamma-1 chain C regi 99.1 9.7E-11 3.3E-15 75.3 3.7 104 45-161 1-114 (240)
488 1nkr_A P58-CL42 KIR; inhibitor 99.1 1.2E-09 4.2E-14 68.2 8.6 78 78-158 7-85 (201)
489 4frw_A Poliovirus receptor-rel 99.1 7.4E-11 2.5E-15 74.1 3.0 65 1-66 145-209 (218)
490 1zox_A CLM-1; IG-superfamily, 99.1 2.4E-09 8.2E-14 60.7 9.0 79 88-166 9-104 (113)
491 2or8_A Hepatitis A virus cellu 99.1 2.5E-10 8.5E-15 65.1 4.9 73 88-160 5-97 (116)
492 1xt5_A Variable region-contain 99.0 9.4E-10 3.2E-14 64.3 7.3 71 88-159 12-115 (135)
493 3qr2_A Basigin; CD147, EMMPRIN 99.0 7.7E-10 2.6E-14 64.9 6.8 58 1-58 48-116 (137)
494 1nfd_E H57 FAB; complex (immun 99.0 8E-10 2.7E-14 69.4 7.2 70 88-157 7-90 (212)
495 1svz_A Immunoglobulin;, single 99.0 1.7E-09 5.9E-14 69.5 8.9 73 88-160 9-100 (247)
496 1i1r_A GP130, interleukin-6 re 99.0 8.6E-08 2.9E-12 63.5 17.1 132 2-163 39-186 (303)
497 1pew_A JTO2, A lambda-6 type i 99.0 1.2E-09 4.2E-14 61.5 7.1 71 88-158 8-94 (109)
498 2q87_A CMRF35-H antigen; all-b 99.0 2.6E-09 8.9E-14 60.3 8.4 72 88-159 4-91 (110)
499 3nfj_J T cell receptor beta ch 99.0 5.7E-09 2E-13 67.0 11.1 70 88-157 9-95 (245)
500 1ccz_A Protein (CD58); LFA-3, 99.0 3.9E-10 1.3E-14 68.8 5.3 78 89-167 4-91 (171)
No 1
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.97 E-value=5.9e-30 Score=160.26 Aligned_cols=161 Identities=24% Similarity=0.382 Sum_probs=129.8
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|.+.|++++..+.....++.+....++..+|.|.+++.+|+|.|+|.+.|..+.....+.|.|..++. ...+
T Consensus 31 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~-----~~~~ 105 (197)
T 2j8h_A 31 HPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAK-----IHLP 105 (197)
T ss_dssp SSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEEEEEEE-----ECCS
T ss_pred cCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEEEEcCCCc-----CCCC
Confidence 47899999999999865566777665446677999999999999999999999988877788888865432 1111
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEcc-CCCCCCeeEEEEEEcCC
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKR-ATDDENGTYFIVARNIY 159 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~n~~ 159 (168)
.....+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+....++..........|.|.+ +..+|.|.|+|.|.|..
T Consensus 106 ~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~ 184 (197)
T 2j8h_A 106 KTLEGM-GAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRF 184 (197)
T ss_dssp SCBTTB-EEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETT
T ss_pred cccccc-CeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCC
Confidence 111112 3466788999999999999999999999999988877777766666678999999 99999999999999999
Q ss_pred ceeeEEEE
Q psy16859 160 GSDRAFVT 167 (168)
Q Consensus 160 g~~~~~~~ 167 (168)
|..+..+.
T Consensus 185 g~~~~~~~ 192 (197)
T 2j8h_A 185 GIDQKTVE 192 (197)
T ss_dssp EEEEEEEE
T ss_pred CcEeEEEE
Confidence 99876654
No 2
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.97 E-value=3.5e-29 Score=158.04 Aligned_cols=161 Identities=13% Similarity=0.288 Sum_probs=116.9
Q ss_pred CCCceEEEEECCEecCCCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCC------
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGA------ 73 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~------ 73 (168)
.|.|+|.|++|+++|. .+.++.+..+ ..+..+|.|.+++.+|+|.|+|.+.| |.......+.+.......
T Consensus 30 ~P~p~i~W~kng~~l~-~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~~~~~~~~~~~~~~~~~~~~~ 106 (207)
T 3rbs_A 30 SGNAKVNYIFNEKEIF-EGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKATNHSTVVLVGDVFKKLQKEAE 106 (207)
T ss_dssp CSCCEEEEEETTEEEC-SSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEEEEEEEEECTHHHHHHHHHHH
T ss_pred CCCCEEEEEECCEECc-cCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeEEEEEEEEEccchhhhccccc
Confidence 4899999999999994 4456665544 24677899999999999999999998 444333333221100000
Q ss_pred cc-----cCCCCeEEecCCcceEeecCCeEEEEEEEccC-CCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCC
Q psy16859 74 VK-----HEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDE 147 (168)
Q Consensus 74 ~~-----~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 147 (168)
.. ...+|.+...+ ...+.+|..+.|.|.+.|. |.|.+.|++++..+....++. ......+|.|.++..+|
T Consensus 107 ~~~~~~~~~~~P~~~~~~--~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~--~~~~~~~L~I~~v~~~D 182 (207)
T 3rbs_A 107 FQRQEWIRKQGPHFVEYL--SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHD--FKDGICTLLITEFSKKD 182 (207)
T ss_dssp HHHHHHHHHTSSEEEEEE--EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCC--CSSEEEEEEETTCCGGG
T ss_pred ccccccccCCCCceEecC--CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceE--cCCCEEEEEECCCCccc
Confidence 00 01245554433 3678899999999999998 999999999999887654431 12234579999999999
Q ss_pred CeeEEEEEEcCCceeeEEEEC
Q psy16859 148 NGTYFIVARNIYGSDRAFVTV 168 (168)
Q Consensus 148 ~g~y~C~~~n~~g~~~~~~~v 168 (168)
+|.|+|.|.|..|.....+.|
T Consensus 183 ~G~Y~C~a~N~~G~~~~~~~L 203 (207)
T 3rbs_A 183 AGIYEVILKDDRGKDKSRLKL 203 (207)
T ss_dssp CEEEEEEEEETTEEEEEEEEE
T ss_pred CEEEEEEEEcCCCEEEEEEEE
Confidence 999999999999999877653
No 3
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.97 E-value=2.9e-29 Score=156.73 Aligned_cols=158 Identities=24% Similarity=0.399 Sum_probs=128.9
Q ss_pred CCCceEEEEECCEecCCC-CCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKS-SPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
+|.|.+.|++++..+... ..++.+... ++..+|.|.+++.+|+|.|+|.+.+..+.....+.|.|.... .+
T Consensus 32 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~~-------~~ 103 (194)
T 2a38_A 32 FPVPEVSWFRDGQVISTSTLPGVQISFS-DGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAET-------AP 103 (194)
T ss_dssp ESCCEEEEEESSSBCCTTTSTTCEEEEE-TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC-------EE
T ss_pred cCCCEEEEEECCEEcccccCCceEEEeC-CCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEccCC-------CC
Confidence 378899999999888533 235555555 666799999999999999999999988887777778875321 24
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+....++..........|.|.++..+|.|.|+|.|.|..
T Consensus 104 p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 182 (194)
T 2a38_A 104 PNFVQRL-QSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSV 182 (194)
T ss_dssp EEEEECC-CCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETT
T ss_pred CEEEeCC-ccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCC
Confidence 5555555 467788999999999999999999999999999887777766666666789999999999999999999999
Q ss_pred ceeeEEEE
Q psy16859 160 GSDRAFVT 167 (168)
Q Consensus 160 g~~~~~~~ 167 (168)
|.....+.
T Consensus 183 g~~~~~~~ 190 (194)
T 2a38_A 183 GRATSTAE 190 (194)
T ss_dssp EEEEEEEE
T ss_pred CceEEEEE
Confidence 98886654
No 4
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.97 E-value=6.5e-29 Score=157.13 Aligned_cols=163 Identities=17% Similarity=0.295 Sum_probs=126.2
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCC---------
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSG--------- 72 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~--------- 72 (168)
|.|.+.|++++..+. ...++.+... +...+|.|.+++.+|+|.|+|.+.|..+.....+.|.|......
T Consensus 31 p~~~i~W~~~g~~i~-~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~~~~~~~~~~ 108 (212)
T 2r15_A 31 EDLKVNWSHNGSAIR-YSDRVKTGVT-GEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQ 108 (212)
T ss_dssp SSCEEEEEETTEECC-CCSSEEEEEE-TTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCEEcc-CCCeEEEEEe-CCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeeccchhhhccccCc
Confidence 689999999999984 4567777666 66678999999999999999999998777666666554210000
Q ss_pred --CcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEec-CCEEEEEEccCCCCCCe
Q psy16859 73 --AVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETV-NDYVRLTLKRATDDENG 149 (168)
Q Consensus 73 --~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g 149 (168)
......|+.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+....++..... .....|.|.++..+|.|
T Consensus 109 ~~~~~~~~p~~~~~~~-~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 187 (212)
T 2r15_A 109 AAIAEKNRARVLGGLP-DVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSG 187 (212)
T ss_dssp HHHHHHHSCEEEEBCC-SEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCE
T ss_pred ccccccCCCcccccCC-CcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCe
Confidence 00001233333334 567889999999999999999999999999999887776665544 45678999999999999
Q ss_pred eEEEEEEcCCceeeEEEE
Q psy16859 150 TYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 150 ~y~C~~~n~~g~~~~~~~ 167 (168)
.|+|.|.|..|.....+.
T Consensus 188 ~Y~C~a~N~~g~~~~~~~ 205 (212)
T 2r15_A 188 KYGLVVKNKYGSETSDFT 205 (212)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEcCCCcEEEEEE
Confidence 999999999998876654
No 5
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.97 E-value=2e-28 Score=161.19 Aligned_cols=154 Identities=21% Similarity=0.398 Sum_probs=128.7
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|.+.|++++..+. ...++..... .....|.|.+++.+|+|.|+|.+.|..|.....+.|.|.. +|
T Consensus 126 ~p~~~v~W~~~~~~~~-~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----------~p 193 (284)
T 2rik_A 126 SPEIKVLWYKDETEIQ-ESSKFRMSFV-ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE----------PP 193 (284)
T ss_dssp SSCCEEEEEETTEECC-CSSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC----------CC
T ss_pred eCCCEEEEEECCEECc-CCCcEEEEEc-CCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEec----------CC
Confidence 5889999999999984 4446665554 5567899999999999999999999988888888888853 44
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+....++..........|.|.++..+|.|.|+|.|.|..|
T Consensus 194 ~~~~~~-~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 272 (284)
T 2rik_A 194 VFRKKP-HPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVG 272 (284)
T ss_dssp BCCSCC-CCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTE
T ss_pred cceeCC-CcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCC
Confidence 444444 4567889999999999999999999999999998877777766666667899999999999999999999999
Q ss_pred eeeEEEE
Q psy16859 161 SDRAFVT 167 (168)
Q Consensus 161 ~~~~~~~ 167 (168)
.....++
T Consensus 273 ~~~~~~~ 279 (284)
T 2rik_A 273 SYTCVGS 279 (284)
T ss_dssp EEEEEEE
T ss_pred ceeEEEE
Confidence 9886664
No 6
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.97 E-value=8.7e-30 Score=160.20 Aligned_cols=153 Identities=13% Similarity=0.120 Sum_probs=111.0
Q ss_pred CCCceEEEEECCEecC----------------CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLP----------------KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARV 64 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 64 (168)
.|.|.|.|+|++..+. ....++.+... .+..+|.|.+++.+|+|.|+|.+.|..|.....+.|
T Consensus 23 ~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 101 (203)
T 4fa8_A 23 GPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRS-ANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHL 101 (203)
T ss_dssp STTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEc-CCEEEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEE
Confidence 3889999999764321 01223444444 567789999999999999999999999988888888
Q ss_pred EEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccC----CCCcEEEecCCEEEEEE
Q psy16859 65 DVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITT----SSRTMTETVNDYVRLTL 140 (168)
Q Consensus 65 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~----~~~~~~~~~~~~~~l~i 140 (168)
.|.. ||.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..++.....+....+.+
T Consensus 102 ~V~~----------p~~~~~~~-~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i 170 (203)
T 4fa8_A 102 SVVK----------PLTLSVHS-ERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVD 170 (203)
T ss_dssp EEEE----------EEEEEEEE-EECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECTTSCEEEEEE
T ss_pred EecC----------Cceeeecc-eeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEEE
Confidence 8843 44455444 456678999999999999999999999986543321 22333333333355667
Q ss_pred ccCCCCCCeeEEEEEEcCCceeeEE
Q psy16859 141 KRATDDENGTYFIVARNIYGSDRAF 165 (168)
Q Consensus 141 ~~~~~~d~g~y~C~~~n~~g~~~~~ 165 (168)
.++..+|+|.|+|.|.|..|.+...
T Consensus 171 ~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 171 LSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp EEECSSCCCCEEEEEESSSCEEEEE
T ss_pred CCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 7899999999999999999998753
No 7
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.97 E-value=3.8e-28 Score=151.86 Aligned_cols=155 Identities=26% Similarity=0.446 Sum_probs=127.2
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|.+.|++++..+ ....++.+... +...+|.|.+++.+|+|.|+|.+.+..+.......|.|...+.
T Consensus 34 ~p~~~v~W~~~~~~~-~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~p~--------- 102 (197)
T 3lcy_A 34 RPLPDIKWYRFGKEL-IQSRKYKMSSD-GRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQ--------- 102 (197)
T ss_dssp ESCCEEEEEETTEEE-CCCSSEEEEES-SSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEEEEEE---------
T ss_pred CCCCEEEEEECCEEC-CCCccEEEEeC-CCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEEcCCC---------
Confidence 478899999999988 34567777766 6677999999999999999999999888877777888854332
Q ss_pred eEEe--cCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCC-CCCeeEEEEEEc
Q psy16859 81 MFLT--RPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATD-DENGTYFIVARN 157 (168)
Q Consensus 81 ~~~~--~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~g~y~C~~~n 157 (168)
+.. .......+..|..+.|.|.+.+.|.+.+.|++++..+....+...........|.|.++.. +|.|.|+|.|.|
T Consensus 103 -~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n 181 (197)
T 3lcy_A 103 -FHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSN 181 (197)
T ss_dssp -ECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEEC
T ss_pred -CCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEc
Confidence 111 1113456788999999999999999999999999998877777766666668899999985 899999999999
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
..|.....+.
T Consensus 182 ~~g~~~~~~~ 191 (197)
T 3lcy_A 182 VFGTVDAILD 191 (197)
T ss_dssp SSCEEEEEEE
T ss_pred CcCceEEEEE
Confidence 9999887664
No 8
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.97 E-value=2e-27 Score=150.47 Aligned_cols=156 Identities=17% Similarity=0.383 Sum_probs=123.5
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCC-CCCeEEEEEEEcccce-eeEEEEEEEEeccCCCcccCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTA-EEAGKYTCRVSNEYGY-TETFARVDVINVSSGAVKHEK 78 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~ 78 (168)
+|.|.+.|++++..+.....++.+....++..+|.|.+++. +|+|.|+|.+.|..+. ....+.|.|...... ...
T Consensus 33 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~---~~~ 109 (212)
T 2yd1_A 33 DPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKT---PAG 109 (212)
T ss_dssp SSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEECTTCS---CTT
T ss_pred CCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEecccCC---CCC
Confidence 47899999999999865667887665546667999999999 9999999999998887 566788888654320 011
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
+|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+........... +.|.|.++..+|.|.|+|.|.|.
T Consensus 110 ~p~~~~~~-~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~N~ 185 (212)
T 2yd1_A 110 FPVITQGP-GTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKD---GFLQIENSREEDQGKYECVAENS 185 (212)
T ss_dssp CCEEEECC-CCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEET---TEEEECSCCGGGCEEEEEEEEET
T ss_pred CCeeEeCC-CceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccC---CeEEEccCChhhCEEEEEEeecC
Confidence 25555555 466788999999999999999999999999988875433222222 27999999999999999999999
Q ss_pred Cceee
Q psy16859 159 YGSDR 163 (168)
Q Consensus 159 ~g~~~ 163 (168)
.|...
T Consensus 186 ~G~~~ 190 (212)
T 2yd1_A 186 MGTEH 190 (212)
T ss_dssp TEEEE
T ss_pred CCcee
Confidence 99875
No 9
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.97 E-value=1.9e-27 Score=150.61 Aligned_cols=157 Identities=21% Similarity=0.361 Sum_probs=118.9
Q ss_pred CCCceEEEEECCEecCCCCCceEEE-ecCCCEEEEEEcCC-CCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYI-EDSNNLHTLILSGV-TAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEK 78 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~-~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~ 78 (168)
+|.|.+.|++++..+... +.... ........|.|.++ +.+|+|.|+|.+.|..+.....+.|.|...... ...
T Consensus 33 ~p~~~v~W~k~~~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~---~~~ 107 (212)
T 2yd6_A 33 DPRPKIVWNKKGKKVSNQ--RFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQI---PRG 107 (212)
T ss_dssp ESCCEEEEEETTEECCCT--TEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEECGGGC---CTT
T ss_pred CCCCEEEEEECCcCCCCC--ceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEeccCcc---CCC
Confidence 478999999999998432 33322 22134568999999 599999999999999888777888888654320 012
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCC---CCcEEEecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTS---SRTMTETVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
.|.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+... .++..........|.|.++..+|.|.|+|.|
T Consensus 108 ~p~~~~~~-~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 186 (212)
T 2yd6_A 108 FPTIDMGP-QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVA 186 (212)
T ss_dssp CCEEEECC-CCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred cceeecCC-cceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEE
Confidence 34555555 4567889999999999999999999999999887654 2333333445678999999999999999999
Q ss_pred EcCCceee
Q psy16859 156 RNIYGSDR 163 (168)
Q Consensus 156 ~n~~g~~~ 163 (168)
.|..|...
T Consensus 187 ~N~~G~~~ 194 (212)
T 2yd6_A 187 TNSAGTRY 194 (212)
T ss_dssp EETTEEEE
T ss_pred ECCCCccc
Confidence 99999875
No 10
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.96 E-value=5.6e-28 Score=172.82 Aligned_cols=153 Identities=22% Similarity=0.414 Sum_probs=129.1
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|.+.|+|++..+. ...++.+... .....|.|.+++.+|+|.|+|.+.|..|.....+.|.|. .+|
T Consensus 318 ~P~p~v~W~k~~~~l~-~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~----------~~P 385 (570)
T 3b43_A 318 SPEIKVLWYKDETEIQ-ESSKFRMSFV-ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVK----------EPP 385 (570)
T ss_dssp SSSCEEEEEETTEECC-CSSSEEEEEE-TTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEE----------CCC
T ss_pred CCCCEEEEeECCEECC-CCCcEEEEEE-CCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEec----------CCC
Confidence 5899999999999984 4456665544 455689999999999999999999999998888888884 355
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|++++..+....++.........+|.|.++..+|.|.|+|.|.|..|
T Consensus 386 ~~~~~~-~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G 464 (570)
T 3b43_A 386 VFRKKP-HPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVG 464 (570)
T ss_dssp EECSCC-CCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred eeecCC-CceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCC
Confidence 555555 4667889999999999999999999999999998877777666666667899999999999999999999999
Q ss_pred eeeEEE
Q psy16859 161 SDRAFV 166 (168)
Q Consensus 161 ~~~~~~ 166 (168)
.....+
T Consensus 465 ~~~~~~ 470 (570)
T 3b43_A 465 SDTCVG 470 (570)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 887544
No 11
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.96 E-value=7e-28 Score=172.30 Aligned_cols=155 Identities=22% Similarity=0.447 Sum_probs=128.7
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|++.|+|++..+. ...++.+..+ +...+|.|.+++.+|+|.|+|.+.|..|.....+.|.| ..||
T Consensus 411 ~P~p~v~W~k~g~~l~-~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v----------~~~P 478 (570)
T 3b43_A 411 TPPFQVSWHKDKRELR-SGKKYKIMSE-NFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITL----------KAPP 478 (570)
T ss_dssp SSSCCCEEEETTEECC-SSSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE----------CCCC
T ss_pred CCCCEEEEEECCEECc-CCCCEEEEEc-CCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEe----------ccCC
Confidence 5899999999999984 4567777666 66678999999999999999999999999888888888 4566
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEec-cCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDI-TTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+ ....+..........+|.|.++..+|+|.|+|.|.|..
T Consensus 479 ~~~~~~-~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~ 557 (570)
T 3b43_A 479 RFVKKL-SDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEA 557 (570)
T ss_dssp EEEECC-CCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSS
T ss_pred cccccC-CCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECC
Confidence 676666 4667889999999999999999999999998554 34444444444556799999999999999999999999
Q ss_pred ceeeEEEEC
Q psy16859 160 GSDRAFVTV 168 (168)
Q Consensus 160 g~~~~~~~v 168 (168)
|..+..+.|
T Consensus 558 G~~~~~a~L 566 (570)
T 3b43_A 558 GTQECFATL 566 (570)
T ss_dssp CEEEEEEEE
T ss_pred cEEEEEEEE
Confidence 999876643
No 12
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.96 E-value=5.4e-27 Score=154.37 Aligned_cols=155 Identities=26% Similarity=0.390 Sum_probs=127.3
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|.+.|++++..+. ...++.+... .+..+|.|.+++.+|+|.|+|.+.|..+.....+.|.|.. +|
T Consensus 32 ~p~~~v~W~~~~~~~~-~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~----------~p 99 (284)
T 2rik_A 32 TAPIKITWAKDNREIR-PGGNYKMTLV-ENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQE----------PP 99 (284)
T ss_dssp SSCCEEEEEETTEECC-SSSSEEEEEE-TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC----------CC
T ss_pred CCCCEEEEEECCEECc-CCCcEEEEEc-CCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccC----------CC
Confidence 4788999999999984 4456665544 5567999999999999999999999888877788888843 44
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
.+...+.....+..|+.+.|.|.+.+.|.+.+.|++++..+....+...........|.|.++..+|.|.|+|.+.|..|
T Consensus 100 ~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 179 (284)
T 2rik_A 100 RFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAG 179 (284)
T ss_dssp EEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred cccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCC
Confidence 44444444566889999999999999999999999999988877766665556678899999999999999999999999
Q ss_pred eeeEEEE
Q psy16859 161 SDRAFVT 167 (168)
Q Consensus 161 ~~~~~~~ 167 (168)
.....+.
T Consensus 180 ~~~~~~~ 186 (284)
T 2rik_A 180 SASSSTS 186 (284)
T ss_dssp EEEEEEE
T ss_pred ceeEEEE
Confidence 8765543
No 13
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.96 E-value=8.9e-27 Score=145.14 Aligned_cols=146 Identities=18% Similarity=0.232 Sum_probs=116.0
Q ss_pred CceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeE
Q psy16859 3 KPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMF 82 (168)
Q Consensus 3 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~ 82 (168)
.+.+.|++++..+.... .. .....|.|.+++.+|+|.|+|.+.+. +.....+.|.|. .+|.+
T Consensus 34 ~~~v~W~~~~~~~~~~~-~~------~~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V~----------~~p~~ 95 (190)
T 2wv3_A 34 LMYSYWTKNGVELTATR-KN------ASNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEVK----------AAPDI 95 (190)
T ss_dssp EEEEEEEETTEECTTCC-BC------CSEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEEE----------CCCEE
T ss_pred ceEEEEEECCEECcccc-eE------eccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEEe----------cCCcc
Confidence 38999999999884322 21 13358999999999999999999998 777778888884 34555
Q ss_pred EecCCcceEeecCCeEEEEEEEccCCCCeEEEee--CCEecc---CCCCcEEEecCCEEEEEEccCC-CCCCeeEEEEEE
Q psy16859 83 LTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMK--GIKDIT---TSSRTMTETVNDYVRLTLKRAT-DDENGTYFIVAR 156 (168)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~--~~~~~~---~~~~~~~~~~~~~~~l~i~~~~-~~d~g~y~C~~~ 156 (168)
...+ ....+..|+.+.|.|.+.|.|.+.+.|++ ++..+. ...++..........|.|.++. .+|.|.|+|.|.
T Consensus 96 ~~~~-~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 174 (190)
T 2wv3_A 96 TGHK-RSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNAT 174 (190)
T ss_dssp EEEC-SEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEE
T ss_pred cccC-CcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEE
Confidence 5555 46678899999999999999999999999 776654 3345555555556789999999 799999999999
Q ss_pred cCCceeeEEEE
Q psy16859 157 NIYGSDRAFVT 167 (168)
Q Consensus 157 n~~g~~~~~~~ 167 (168)
|..|.....+.
T Consensus 175 N~~g~~~~~~~ 185 (190)
T 2wv3_A 175 NSIGSASVSTV 185 (190)
T ss_dssp CSSCEEEEEEE
T ss_pred ecCCcceeEEE
Confidence 99998876654
No 14
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.96 E-value=3.5e-27 Score=156.69 Aligned_cols=161 Identities=24% Similarity=0.382 Sum_probs=127.8
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|.+.|++++..+.....++.+....++..+|.|.+++.+|+|.|+|.+.|..|.....+.|.|..++. ...+
T Consensus 31 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~-----~~~~ 105 (305)
T 2nzi_A 31 HPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAK-----IHLP 105 (305)
T ss_dssp SSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEECEEEE-----ECCC
T ss_pred CCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEEEEecCCc-----cCCC
Confidence 47899999999999865556777665436677999999999999999999999988877788888844321 0111
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEcc-CCCCCCeeEEEEEEcCC
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKR-ATDDENGTYFIVARNIY 159 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~n~~ 159 (168)
.....+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+....++..........|.|.+ +...|.|.|+|.|.|..
T Consensus 106 ~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~ 184 (305)
T 2nzi_A 106 KTLEGM-GAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRF 184 (305)
T ss_dssp HHHHSS-CCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETT
T ss_pred cccccc-ccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCC
Confidence 111112 3566788999999999999999999999999888777777666666677899999 99999999999999999
Q ss_pred ceeeEEEE
Q psy16859 160 GSDRAFVT 167 (168)
Q Consensus 160 g~~~~~~~ 167 (168)
|.....+.
T Consensus 185 G~~~~~~~ 192 (305)
T 2nzi_A 185 GIDQKTVE 192 (305)
T ss_dssp EEEEEEEE
T ss_pred CceeeEEE
Confidence 98876554
No 15
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.96 E-value=1.3e-27 Score=159.48 Aligned_cols=165 Identities=18% Similarity=0.287 Sum_probs=127.5
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEecc----------
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVS---------- 70 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~---------- 70 (168)
+|.|.+.|++++..+. ...++..... +....|.|.+++.+|+|.|+|.+.|..+.....+.+.+....
T Consensus 135 ~p~~~i~W~~~~~~~~-~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~ 212 (317)
T 2y25_A 135 VEDLKVNWSHNGSAIR-YSDRVKTGVT-GEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLK 212 (317)
T ss_dssp CSSCEEEEEESSSBCC-CCSSEEEEEC-SSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEECCEECC-CCCCeEEecc-CCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccC
Confidence 3789999999999884 4567776666 667789999999999999999999988877776666653100
Q ss_pred CCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEec-CCEEEEEEccCCCCCCe
Q psy16859 71 SGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETV-NDYVRLTLKRATDDENG 149 (168)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g 149 (168)
........++.+...+.....+..|+.+.|.|.+.|.|.+.+.|++++..+....++..... .....|.|.++..+|+|
T Consensus 213 ~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 292 (317)
T 2y25_A 213 QAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSG 292 (317)
T ss_dssp HHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCE
T ss_pred CcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCE
Confidence 00000122334444433567889999999999999999999999999988877666555444 44578999999999999
Q ss_pred eEEEEEEcCCceeeEEEE
Q psy16859 150 TYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 150 ~y~C~~~n~~g~~~~~~~ 167 (168)
.|+|.|.|..|.....+.
T Consensus 293 ~Y~C~a~N~~g~~~~~~~ 310 (317)
T 2y25_A 293 KYGLVVKNKYGSETSDFT 310 (317)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEeCCCeEEEEEE
Confidence 999999999999886664
No 16
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.96 E-value=2e-26 Score=143.53 Aligned_cols=152 Identities=18% Similarity=0.326 Sum_probs=117.2
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|.+.|++++..+. ...++.+... .. +|.|.+++.+|+|.|+|.+.+..+.....+.|.|.. +|
T Consensus 31 ~p~~~v~W~~~~~~~~-~~~~~~~~~~-~~--~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~----------~p 96 (192)
T 2va4_A 31 SPEPAISWFRNGKLIE-ENEKYILKGS-NT--ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV----------QP 96 (192)
T ss_dssp SSCCEEEEEETTEECC-CSSSEEEETT-TT--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE----------EE
T ss_pred CCCCeEEEEECCeEcC-CCccEEEeCC-ee--EEEEecCChhcCcEEEEEEEccccccceEEEEEEEc----------cC
Confidence 4789999999999984 4456665543 33 799999999999999999999888777777788753 23
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeC--CEeccC-----CCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKG--IKDITT-----SSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~--~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
.+...+ ...+..|..+.|.|.+.+.|.+.+.|+++ +..+.. ..++..........|.|.++..+|.|.|+|
T Consensus 97 ~~~~~~--~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 174 (192)
T 2va4_A 97 HIIQLK--NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDC 174 (192)
T ss_dssp EEEEEC--CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEE
T ss_pred cccccC--cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEE
Confidence 333333 34567899999999999999999999997 555443 223334444455789999999999999999
Q ss_pred EEEcCCceeeEEEEC
Q psy16859 154 VARNIYGSDRAFVTV 168 (168)
Q Consensus 154 ~~~n~~g~~~~~~~v 168 (168)
.|.|..|.....+.|
T Consensus 175 ~a~n~~g~~~~~~~l 189 (192)
T 2va4_A 175 EAASRIGGHQKSMYL 189 (192)
T ss_dssp EEECSSCEEEEEEEE
T ss_pred EEEecCCceEEEEEE
Confidence 999999998766643
No 17
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.96 E-value=2.6e-26 Score=143.56 Aligned_cols=145 Identities=20% Similarity=0.315 Sum_probs=112.4
Q ss_pred CCCceEEEEECCEecCCCC-CceEEEecCCC------EEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEEeccCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSS-PRFKYIEDSNN------LHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVINVSSG 72 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~-~~~~~~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~ 72 (168)
+|.|.+.|++++..+.... .++++....++ ..+|.|.+++.+|+|.|+|.+.+..+.... .+.|.|
T Consensus 30 ~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V------ 103 (195)
T 2c5d_C 30 GEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGL------ 103 (195)
T ss_dssp SSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEE------
T ss_pred CCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCCceecccEEEEE------
Confidence 4788999999999985332 24444433111 468999999999999999999998766544 477777
Q ss_pred CcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCC-eEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeE
Q psy16859 73 AVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKP-KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTY 151 (168)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 151 (168)
..+|.+...+ ....+..|+.+.|.|.+.+.|.+ .+.|++++..+...... .....|.|.++. |+|.|
T Consensus 104 ----~~~p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~-----~~~~~L~i~~~~--d~G~Y 171 (195)
T 2c5d_C 104 ----EGLPYFLEEP-EDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH-----GPQRSLHVPGLN--KTSSF 171 (195)
T ss_dssp ----CCSCEEEECC-CCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS-----SCCEEEEECCCS--SCEEE
T ss_pred ----ecCCeEEcCC-CcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc-----CCCCeEEEcccc--cCceE
Confidence 3456666656 45778899999999999999999 99999999887655432 334689999887 78999
Q ss_pred EEEEEcCCceee
Q psy16859 152 FIVARNIYGSDR 163 (168)
Q Consensus 152 ~C~~~n~~g~~~ 163 (168)
+|.|.|..|...
T Consensus 172 ~C~a~N~~g~~~ 183 (195)
T 2c5d_C 172 SCEAHNAKGVTT 183 (195)
T ss_dssp EEEEEETTEEEE
T ss_pred EEEEEcCCCceE
Confidence 999999999774
No 18
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.95 E-value=1.3e-26 Score=144.41 Aligned_cols=149 Identities=19% Similarity=0.345 Sum_probs=114.9
Q ss_pred CCceEEEEE-CCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccc-ceeeEEEEEEEEeccCCCcccCCC
Q psy16859 2 VKPEVIWLR-GNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEY-GYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 2 p~p~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
|.+.+.|++ ++..+.....++..........+|.|.+++.+|+|.|+|.+.+.. +.....+.|.|. .+
T Consensus 31 ~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~----------~~ 100 (191)
T 1epf_A 31 KDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIF----------QK 100 (191)
T ss_dssp CCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEE----------CC
T ss_pred CCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEEee----------cC
Confidence 378999999 888886556677765433556799999999999999999999987 444556677773 34
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+............ ...|.|.++..+|.|.|+|.|.|..
T Consensus 101 p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~a~n~~ 178 (191)
T 1epf_A 101 LMFKNAP-TPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLS-NNYLQIRGIKKTDEGTYRCEGRILA 178 (191)
T ss_dssp SEEEECC-SSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECT-TSCEEETTCCGGGCEEEEEEEEEGG
T ss_pred ceEecCC-CcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEec-CCeEEECCCChhhCEEEEEEEEEec
Confidence 5555555 4667889999999999999999999999999887643322222111 1269999999999999999999988
Q ss_pred cee
Q psy16859 160 GSD 162 (168)
Q Consensus 160 g~~ 162 (168)
|..
T Consensus 179 ~~~ 181 (191)
T 1epf_A 179 RGE 181 (191)
T ss_dssp GTE
T ss_pred cee
Confidence 644
No 19
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.95 E-value=2.8e-26 Score=153.04 Aligned_cols=158 Identities=20% Similarity=0.322 Sum_probs=117.2
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEE-cccceeeE---EEEEEEEeccCCCccc
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVS-NEYGYTET---FARVDVINVSSGAVKH 76 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~-~~~~~~~~---~~~l~v~~~~~~~~~~ 76 (168)
+|.|.+.|++++..+.....++..... .|.|.+++.+|+|.|+|.+. +..|.... .+.+.+.....
T Consensus 136 ~p~~~i~W~k~~~~l~~~~~~~~~~~~-----~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~----- 205 (315)
T 1itb_B 136 NELPKLQWYKDCKPLLLDNIHFSGVKD-----RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENK----- 205 (315)
T ss_dssp TCCCCCEEEETTEECCCCSSSEEEETT-----EEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCC-----
T ss_pred CCCCEEEEEECCEECCCccceEeecCc-----eEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCC-----
Confidence 478999999999998554445443333 89999999999999999999 67776632 33343432211
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEE----ecC--------CEEEEEEccCC
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTE----TVN--------DYVRLTLKRAT 144 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~----~~~--------~~~~l~i~~~~ 144 (168)
..+|.+...+.....+..|+.+.|.|.+.|.|.+.+.|++++..+......... ... ....|.|.++.
T Consensus 206 ~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 285 (315)
T 1itb_B 206 PTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIE 285 (315)
T ss_dssp CCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCC
T ss_pred CCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecC
Confidence 245555544433457889999999999999999999999999988765432211 111 13489999999
Q ss_pred CCC-CeeEEEEEEcCCceeeEEEEC
Q psy16859 145 DDE-NGTYFIVARNIYGSDRAFVTV 168 (168)
Q Consensus 145 ~~d-~g~y~C~~~n~~g~~~~~~~v 168 (168)
.+| +|.|+|.|.|..|.....+.|
T Consensus 286 ~~d~~G~Y~C~a~N~~G~~~~~~~l 310 (315)
T 1itb_B 286 SRFYKHPFTCFAKNTHGIDAAYIQL 310 (315)
T ss_dssp GGGGTSCEEEEEECTTCCEEEEEEE
T ss_pred HHHcCCceEEEEecCCCceeEEEEE
Confidence 999 999999999999999877653
No 20
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.95 E-value=7e-27 Score=145.66 Aligned_cols=146 Identities=24% Similarity=0.437 Sum_probs=116.6
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee-eEEEEEEEEeccCCCcccCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT-ETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~ 79 (168)
+|.|.+.|++++..+.....++.+... +. +|.|.+++.+|+|.|+|.+.+..+.. .....|.|.. +
T Consensus 34 ~p~~~i~W~~~~~~~~~~~~~~~~~~~-~~--~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~----------~ 100 (192)
T 2iep_A 34 YPQPEISWTRNKILIKLFDTRYSIREN-GQ--LLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKM----------K 100 (192)
T ss_dssp ESCCEEEEEETTEECCTTCTTEEEEGG-GT--EEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEEE----------E
T ss_pred CCCCeEEEEECCEEccccCccEEEcCC-cc--EEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEEe----------C
Confidence 478899999999998655677776654 33 79999999999999999999987763 4456677743 3
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+....+...... ..|.|.++..+|.|.|+|.|.|..
T Consensus 101 p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~ 176 (192)
T 2iep_A 101 PKITRPP-INVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLES---GSLRIHNVQKEDAGQYRCVAKNSL 176 (192)
T ss_dssp EEEEECC-CCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTT---SCEEESSCCGGGCEEEEEEEEETT
T ss_pred CccccCC-cceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecC---CcEEEecCChhhCEEEEEEEEcCC
Confidence 3444444 467788999999999999999999999999998876554433222 369999999999999999999999
Q ss_pred ceee
Q psy16859 160 GSDR 163 (168)
Q Consensus 160 g~~~ 163 (168)
|...
T Consensus 177 g~~~ 180 (192)
T 2iep_A 177 GTAY 180 (192)
T ss_dssp EEEE
T ss_pred CcEE
Confidence 9773
No 21
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.95 E-value=4.1e-26 Score=156.15 Aligned_cols=154 Identities=18% Similarity=0.314 Sum_probs=124.1
Q ss_pred CCCceEEEEEC--CEecCCC----CCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCc
Q psy16859 1 YVKPEVIWLRG--NTPLPKS----SPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAV 74 (168)
Q Consensus 1 ~p~p~v~W~~~--~~~~~~~----~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~ 74 (168)
+|.|.|.|+|+ +..+... ..++.+... ....+|.|.+++.+|+|.|+|.+.|..|.....+.|.|..
T Consensus 27 ~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~------ 99 (389)
T 2jll_A 27 EPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQ-HGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEY------ 99 (389)
T ss_dssp SSCCEEEEEETTTTEEECC--CCSSSSEEEEEC-SSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEEE------
T ss_pred ccCCeEEEEeCCCCceeccCcCCCCCeEEEecc-CCcceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEEEe------
Confidence 58899999999 8887432 457776665 5667999999999999999999999999888888888854
Q ss_pred ccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCC--CcEEEecCCEEEEEEccCCCCCCeeEE
Q psy16859 75 KHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSS--RTMTETVNDYVRLTLKRATDDENGTYF 152 (168)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~ 152 (168)
+|.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+.... +...........|.|.++...|.|.|+
T Consensus 100 ----~P~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 174 (389)
T 2jll_A 100 ----APKFISNQ-TIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYN 174 (389)
T ss_dssp ----EEEECCSC-CEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEE
T ss_pred ----CCEEecCc-ceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEE
Confidence 33333333 34467899999999999999999999999999887654 344444445578999999999999999
Q ss_pred EEEEcCCceeeEEE
Q psy16859 153 IVARNIYGSDRAFV 166 (168)
Q Consensus 153 C~~~n~~g~~~~~~ 166 (168)
|.|.|..|.....+
T Consensus 175 C~a~N~~G~~~~~~ 188 (389)
T 2jll_A 175 CTATNHIGTRFQEY 188 (389)
T ss_dssp EEEEETTEEEEEEE
T ss_pred EEEEcCCCcEEEEE
Confidence 99999999876544
No 22
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.95 E-value=2.2e-26 Score=148.14 Aligned_cols=158 Identities=21% Similarity=0.424 Sum_probs=117.5
Q ss_pred CCCceEEEEECCEecCCCC--CceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSS--PRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEK 78 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~ 78 (168)
+|.|.+.|++++..+.... ........ ..+|.|.+++.+|+|.|+|.+.+..+.....+.|.|..... .
T Consensus 42 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~------~ 112 (241)
T 3grw_A 42 NPTPSISWLKNGREFRGEHRIGGIKLRHQ---QWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSP------H 112 (241)
T ss_dssp SSCCEEEEEETTEECCGGGSTTCCEEEGG---GTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC------C
T ss_pred CCCceeEEEECCcccCCCCcccceeeecc---ceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEEEeccCC------C
Confidence 4789999999999884221 12222222 23799999999999999999999888887788888865332 2
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEee----CCEeccCCCCcEEEe--------cCCEEEEEEccCCCC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMK----GIKDITTSSRTMTET--------VNDYVRLTLKRATDD 146 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~----~~~~~~~~~~~~~~~--------~~~~~~l~i~~~~~~ 146 (168)
++.+.........+..|+.+.|.|.+.+.|.+.+.|++ ++..+.......... ......|.|.++..+
T Consensus 113 ~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 192 (241)
T 3grw_A 113 RPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSER 192 (241)
T ss_dssp CCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGG
T ss_pred CceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcc
Confidence 33444433356778899999999999999999999999 777665443322111 112357999999999
Q ss_pred CCeeEEEEEEcCCceeeEEEE
Q psy16859 147 ENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 147 d~g~y~C~~~n~~g~~~~~~~ 167 (168)
|.|.|+|.|.|..|.....+.
T Consensus 193 d~G~Y~C~a~N~~g~~~~~~~ 213 (241)
T 3grw_A 193 DGGEYLCRATNFIGVAEKAFW 213 (241)
T ss_dssp GCEEEEEEEECSSCEEEEEEE
T ss_pred cCcEEEEEEecCcceEEEEEE
Confidence 999999999999998876654
No 23
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.95 E-value=6e-26 Score=141.20 Aligned_cols=145 Identities=20% Similarity=0.330 Sum_probs=110.6
Q ss_pred CCceEEEEE-CCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee-eEEEEEEEEeccCCCcccCCC
Q psy16859 2 VKPEVIWLR-GNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT-ETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 2 p~p~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~ 79 (168)
|. .+.|++ ++..+ ....++.+... +...+|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|. .+
T Consensus 30 p~-~v~W~~~~~~~~-~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~----------~~ 96 (189)
T 2v44_A 30 PE-SIDWYNPQGEKI-ISTQRVVVQKE-GVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIY----------QK 96 (189)
T ss_dssp CS-EEEEECTTSCBC-CCCSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEE----------CC
T ss_pred Ce-eEEEEeCCCCcc-CCCceEEEECC-CCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEEEe----------cC
Confidence 44 899999 77777 45567777766 666799999999999999999999987765 446677774 23
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccC--CCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITT--SSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..++... . ...|.|.++..+|.|.|+|.|.|
T Consensus 97 p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~-~--~~~L~i~~v~~~d~G~Y~C~a~n 172 (189)
T 2v44_A 97 LTFREVV-SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAML-A--NNNLQILNINKSDEGIYRCEGRV 172 (189)
T ss_dssp CEEESCC-CSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEEC-T--TSCEEETTCCGGGCEEEEEEEEE
T ss_pred CceeecC-CcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEe-c--CCcEEEEEcCcccCeEEEEEEEc
Confidence 4444434 456788999999999999999999999998877653 2222222 1 13799999999999999999999
Q ss_pred CCceee
Q psy16859 158 IYGSDR 163 (168)
Q Consensus 158 ~~g~~~ 163 (168)
..|...
T Consensus 173 ~~~~~~ 178 (189)
T 2v44_A 173 EARGEI 178 (189)
T ss_dssp TTTTEE
T ss_pred cccCce
Confidence 986554
No 24
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.95 E-value=1.2e-26 Score=158.89 Aligned_cols=146 Identities=22% Similarity=0.364 Sum_probs=115.3
Q ss_pred CCCceEEEEEC-CEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 1 YVKPEVIWLRG-NTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 1 ~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
+|.|.+.|+++ +..+. .. ...... . ..|.|.+++.+|+|.|+|.+.|..|.......|.|.. +
T Consensus 232 ~P~p~i~W~k~~~~~~~-~~--~~~~~~-~--~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~----------~ 295 (384)
T 3kld_A 232 NPVPTILWRRADGKPIA-RK--ARRHKS-N--GILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYA----------Q 295 (384)
T ss_dssp ESCCEEEEEETTCCCCC-TT--CEECTT-S--CEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE----------E
T ss_pred cCCCcEEEEeCCCcccc-cc--ceecCC-C--cEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEec----------C
Confidence 48899999995 44552 22 121111 2 3799999999999999999999999988888888853 3
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
|.+...+ ....+..|+.+.|.|.+.|.|.|.+.|++++..+....++... . .+|.|..+..+|+|.|+|.|.|..
T Consensus 296 P~~~~~~-~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~--~--~~L~i~~v~~~D~G~Y~C~A~N~~ 370 (384)
T 3kld_A 296 PNWVQII-NDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIE--Q--GTLNITIVNLSDAGMYQCVAENKH 370 (384)
T ss_dssp EEEEECC-CCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEE--T--TEEEESSCCGGGCEEEEEEEEETT
T ss_pred CccccCC-CceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEe--C--CEEEEeecChhhCEEEEEEEEeCC
Confidence 4444444 4677889999999999999999999999999988766655432 2 279999999999999999999999
Q ss_pred ceeeEEEE
Q psy16859 160 GSDRAFVT 167 (168)
Q Consensus 160 g~~~~~~~ 167 (168)
|.......
T Consensus 371 G~~~~~a~ 378 (384)
T 3kld_A 371 GVIFSSAE 378 (384)
T ss_dssp EEEEEEEE
T ss_pred ceEEeceE
Confidence 99876553
No 25
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.95 E-value=4.4e-26 Score=156.59 Aligned_cols=149 Identities=27% Similarity=0.471 Sum_probs=121.3
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|.+.|++++..+.....++..... .+|.|.+++.+|+|.|+|.+.|..+.....+.|.|.. +|
T Consensus 248 ~p~~~~~W~~~~~~~~~~~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----------~p 313 (403)
T 3laf_A 248 YPPPSFTWLRGEEVIQLRSKKYSLLGG----SNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLV----------PP 313 (403)
T ss_dssp ESCCEEEEEETTEECCCSSSSEEEETT----TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE----------EE
T ss_pred CCCCeEEEEECCeeccCCCceEEECCc----cEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEEC----------CC
Confidence 488999999999988544445444432 2799999999999999999999988888888888853 44
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+........... ..|.|..+..+|.|.|+|.|.|..|
T Consensus 314 ~~~~~~-~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~N~~G 389 (403)
T 3laf_A 314 WFLNHP-SNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGG---SNLRILGVVKSDEGFYQCVAENEAG 389 (403)
T ss_dssp EEEECC-CCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETT---TEEEESSCCGGGCEEEEEEEEETTE
T ss_pred cEeecC-cceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecC---ccEEEeccccccCEEEEEEEEcCCc
Confidence 555555 466788999999999999999999999999998876655444322 3799999999999999999999999
Q ss_pred eeeEEEE
Q psy16859 161 SDRAFVT 167 (168)
Q Consensus 161 ~~~~~~~ 167 (168)
.....+.
T Consensus 390 ~~~~~~~ 396 (403)
T 3laf_A 390 NAQSSAQ 396 (403)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9887664
No 26
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.95 E-value=1.3e-25 Score=138.95 Aligned_cols=142 Identities=18% Similarity=0.332 Sum_probs=110.1
Q ss_pred CCCceEEEEECCEecCCCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEccccee-eEEEEEEEEeccCCCcccCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYT-ETFARVDVINVSSGAVKHEK 78 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~ 78 (168)
+|.|.+.|++++..+.. ..+...... .....+|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|. .
T Consensus 29 ~p~~~v~W~k~~~~~~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~----------~ 97 (182)
T 1rhf_A 29 MEEPDIQWVKDGAVVQN-LDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVE----------G 97 (182)
T ss_dssp CSSCCEEEEETTEECCS-SEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEEE----------C
T ss_pred CCCCeEEEEECCeecCC-CCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEEe----------c
Confidence 48899999999998843 334443332 1224689999999999999999999886653 346778884 3
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCC-eEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKP-KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
+|.+...+ ....+..|+.+.|.|.+.+.|.+ .+.|++++..+..... ....|.|.++ +|+|.|+|.|.|
T Consensus 98 ~p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~-------~~~~L~i~~~--~d~G~Y~C~a~N 167 (182)
T 1rhf_A 98 VPFFTVEP-KDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP-------SPSVLNVTGV--TQSTMFSCEAHN 167 (182)
T ss_dssp SCEEEECC-CCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE-------SSEEEEECCC--SSCEEEEEEEEE
T ss_pred CCeEEecC-cceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC-------CceEEEEecc--ccCeEEEEEEEC
Confidence 55666655 45778899999999999999999 9999999988754321 3457888887 589999999999
Q ss_pred CCceee
Q psy16859 158 IYGSDR 163 (168)
Q Consensus 158 ~~g~~~ 163 (168)
..|...
T Consensus 168 ~~g~~~ 173 (182)
T 1rhf_A 168 LKGLAS 173 (182)
T ss_dssp TTEEEE
T ss_pred CCCCcc
Confidence 999874
No 27
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.94 E-value=2.5e-26 Score=157.77 Aligned_cols=149 Identities=24% Similarity=0.388 Sum_probs=117.5
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|.+.|++++..+.... ...... . .+|.|.+++.+|+|.|+|.+.|..|.....+.|.|.. +|
T Consensus 249 ~p~~~v~W~~~~~~~~~~~--~~~~~~-~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----------~p 313 (404)
T 3p3y_A 249 VPTPDIAWYKKGGDLPSDK--AKFENF-N--KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA----------AP 313 (404)
T ss_dssp SSCCEEEEEETTBCCCTTT--EEEEGG-G--TEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEE----------EE
T ss_pred CCCCcEEEEECCEECCCCc--cccccc-C--ceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeC----------CC
Confidence 5889999999999884332 222222 2 2799999999999999999999999888888888853 44
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCC-cEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSR-TMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+..... ....... ..|.|.++..+|+|.|+|.|.|..
T Consensus 314 ~~~~~~-~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~ 390 (404)
T 3p3y_A 314 YWLDEP-KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAG--DTIIFRDTQISSRAVYQCNTSNEH 390 (404)
T ss_dssp EEEECC-CCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEET--TEEEESSCCSSCCCEEEEEEEETT
T ss_pred eeeccC-CcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecC--CEEEEeecCHHHCEEEEEEEEeCC
Confidence 555555 467788999999999999999999999999998865432 1112222 279999999999999999999999
Q ss_pred ceeeEEEE
Q psy16859 160 GSDRAFVT 167 (168)
Q Consensus 160 g~~~~~~~ 167 (168)
|.....+.
T Consensus 391 G~~~~~~~ 398 (404)
T 3p3y_A 391 GYLLANAF 398 (404)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEE
Confidence 99886654
No 28
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.94 E-value=4.5e-26 Score=145.68 Aligned_cols=158 Identities=21% Similarity=0.375 Sum_probs=115.2
Q ss_pred CCCceEEEEECCEecCCCCC--ceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSP--RFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEK 78 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~ 78 (168)
+|.|.+.|++++..+..... ...... +..+|.|.+++.+|+|.|+|.+.+..+.....+.|.|...+. .
T Consensus 46 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~------~ 116 (231)
T 3ojm_B 46 NPMPTMRWLKNGKEFKQEHRIGGYKVRN---QHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSR------H 116 (231)
T ss_dssp ESCCEEEEEETTEECCGGGSTTCCEEEG---GGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC------C
T ss_pred CCCCeEEEEECCccccccccccceeeec---CcceEEEecCCcccCEEEEEEEecccCcccccEEEEEEcCCC------C
Confidence 37889999999998843211 112222 223799999999999999999999888887788888865432 2
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEee----CCEeccCCCCcEE--Eec-----CCEEEEEEccCCCCC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMK----GIKDITTSSRTMT--ETV-----NDYVRLTLKRATDDE 147 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~----~~~~~~~~~~~~~--~~~-----~~~~~l~i~~~~~~d 147 (168)
++.+.........+..|+.+.|.|.+.+.|.+.+.|++ ++..+........ ... .....|.|.++..+|
T Consensus 117 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 196 (231)
T 3ojm_B 117 RPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEAD 196 (231)
T ss_dssp CCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGG
T ss_pred CCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHH
Confidence 33333332356778899999999999999999999998 6766544332111 111 112469999999999
Q ss_pred CeeEEEEEEcCCceeeEEEE
Q psy16859 148 NGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 148 ~g~y~C~~~n~~g~~~~~~~ 167 (168)
.|.|+|.|.|..|.....+.
T Consensus 197 ~G~Y~C~a~n~~g~~~~~~~ 216 (231)
T 3ojm_B 197 AGEYICKVSNYIGQANQSAW 216 (231)
T ss_dssp CEEEEEEEEETTEEEEEEEE
T ss_pred CeEEEEEEEeccceEeeEEE
Confidence 99999999999998876554
No 29
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.94 E-value=1.5e-25 Score=139.24 Aligned_cols=151 Identities=25% Similarity=0.380 Sum_probs=108.3
Q ss_pred CCCceEEEEECCEecCC-CCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee--EEEEEEEEeccCCCcccC
Q psy16859 1 YVKPEVIWLRGNTPLPK-SSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE--TFARVDVINVSSGAVKHE 77 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~l~v~~~~~~~~~~~ 77 (168)
+|.|.+.|++++..+.. ...++..... + +|.|.+++.+|+|.|+|.+.+..+... ..+.+.+..
T Consensus 29 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~--~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~~--------- 95 (189)
T 2v5t_A 29 SPAPAVSWLYHNEEVTTISDNRFAMLAN--N--NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNV--------- 95 (189)
T ss_dssp SSCCEEEEEC-----CBCCCTTEEECTT--S--CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEE---------
T ss_pred CCCCEEEEEECCccceeccCCeEEEecC--C--CEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEecC---------
Confidence 47899999999987742 3445554433 2 699999999999999999998764332 344555532
Q ss_pred CCCeEEecCC-cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 78 KPAMFLTRPD-TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 78 ~~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
+|.+...+. ....+..|+.+.|.|.+.+.|.+.+.|++++..+....+...... ...|.|.++..+|+|.|+|.|.
T Consensus 96 -~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~ 172 (189)
T 2v5t_A 96 -PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGS--NTELTVRNIINSDGGPYVCRAT 172 (189)
T ss_dssp -EEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETT--TTEEEECSCCGGGCEEEEEEEE
T ss_pred -CCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecC--CCEEEEcCCChhhCeeEEEEEE
Confidence 233333221 134567899999999999999999999999998877665544322 3479999999999999999999
Q ss_pred cCCceeeEEEE
Q psy16859 157 NIYGSDRAFVT 167 (168)
Q Consensus 157 n~~g~~~~~~~ 167 (168)
|..|.....+.
T Consensus 173 n~~g~~~~~~~ 183 (189)
T 2v5t_A 173 NKAGEDEKQAF 183 (189)
T ss_dssp ETTEEEEEEEE
T ss_pred eCCCceeEEEE
Confidence 99998876554
No 30
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.94 E-value=6.9e-26 Score=155.25 Aligned_cols=151 Identities=19% Similarity=0.367 Sum_probs=117.8
Q ss_pred CCCceEEEEECCEecCCC-CCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEEeccCCCcccCC
Q psy16859 1 YVKPEVIWLRGNTPLPKS-SPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVINVSSGAVKHEK 78 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~~ 78 (168)
+|.|.+.|++++..+... ..++..... .....|.|.+++.+|+|.|+|.+.|..|.... .+.|.|..
T Consensus 239 ~p~~~i~W~~~g~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~---------- 307 (395)
T 1bih_A 239 NPMGYPNYFKNGKDVNGNPEDRITRHNR-TSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVS---------- 307 (395)
T ss_dssp SSCCCCEEEETTEECCCCTTSSEESCSS-STTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEE----------
T ss_pred CCCCeEEEEECCEEcCCCCceeEEEEec-CCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEc----------
Confidence 588999999999988532 233332222 22237999999999999999999999888655 78888853
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
+|.+...+.....+..|+.+.|.|.+.|.|.+.+.|++++..+... ++.. ... .|.|.++..+|+|.|+|.|.|.
T Consensus 308 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~--~~~--~L~i~~~~~~d~G~Y~C~a~N~ 382 (395)
T 1bih_A 308 APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATV--TDS--GLVIKGVKNGDKGYYGCRATNE 382 (395)
T ss_dssp EEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEE--ETT--EEEESSCCSTTCEEEEEEEEET
T ss_pred CCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEE--ECC--EEEEeeCCcccCEEEEEEEEcc
Confidence 4555655643377889999999999999999999999999987654 3332 222 7999999999999999999999
Q ss_pred CceeeEEEE
Q psy16859 159 YGSDRAFVT 167 (168)
Q Consensus 159 ~g~~~~~~~ 167 (168)
.|.....+.
T Consensus 383 ~G~~~~~~~ 391 (395)
T 1bih_A 383 HGDKYFETL 391 (395)
T ss_dssp TEEEEEEEE
T ss_pred CCCceEEEE
Confidence 999886654
No 31
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.94 E-value=1.5e-25 Score=148.84 Aligned_cols=156 Identities=21% Similarity=0.328 Sum_probs=112.6
Q ss_pred CCCceEEEEECCEecCCCCCceEEEe-cCCCEEEEEEcCCCC-CCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIE-DSNNLHTLILSGVTA-EEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEK 78 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~-~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~ 78 (168)
+|.|+|.|++++..+. ..++.... ..+....|.|.+++. +|+|.|+|.+.|..|.....+.|.|...+.. ...
T Consensus 33 ~p~~~i~W~k~g~~i~--~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~---p~~ 107 (304)
T 2yd9_A 33 DPKPRVTWNKKGKKVN--SQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQL---PSG 107 (304)
T ss_dssp SSCCEEEEC---------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEECGGGC---CTT
T ss_pred eCCCeEEEEECCEECC--CCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEeccccC---CCC
Confidence 5889999999999883 34555443 213357899999998 9999999999999888777888888754320 011
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCC-cEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSR-TMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+..... ..... .....|.|.++..+|.|.|+|.+.|
T Consensus 108 ~p~i~~~~-~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n 185 (304)
T 2yd9_A 108 FPNIDMGP-QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQ-LRSGALQIESSEETDQGKYECVATN 185 (304)
T ss_dssp CCEEEECC-CCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEE-CTTSCEEECSCCGGGCEEEEEEEEE
T ss_pred CCeeecCC-ccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEe-CCCeEEEEccCCcccCEEEEEEEEe
Confidence 25555555 467788999999999999999999999999988765421 11111 1223799999999999999999999
Q ss_pred CCceee
Q psy16859 158 IYGSDR 163 (168)
Q Consensus 158 ~~g~~~ 163 (168)
..|...
T Consensus 186 ~~g~~~ 191 (304)
T 2yd9_A 186 SAGVRY 191 (304)
T ss_dssp TTEEEE
T ss_pred CCCCEE
Confidence 998754
No 32
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.94 E-value=3.2e-25 Score=147.33 Aligned_cols=151 Identities=23% Similarity=0.356 Sum_probs=111.8
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEE-EEEEEEeccCCCcccCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETF-ARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~-~~l~v~~~~~~~~~~~~~ 79 (168)
+|.|.+.|++++..+.....+..+.....+ .|.|.+++.+|+|.|+|.+.|..|..... ..+.|... ..+
T Consensus 135 ~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~-------~~~ 205 (304)
T 2yd9_A 135 NPDPEITWFKDFLPVDPSASNGRIKQLRSG--ALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQ-------NVA 205 (304)
T ss_dssp SSCCEEEEEETTEECCGGGGTTSEEECTTS--CEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC-------CEE
T ss_pred CCCCeEEEEECCEECcCCCCcceEEeCCCe--EEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEee-------ccC
Confidence 588999999999988533222222222123 79999999999999999999988876543 55666422 124
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
|.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+....... .....|.+.++ +|+|.|+|.|.|..
T Consensus 206 P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~----~~~~~L~i~~~--~d~G~Y~C~a~N~~ 278 (304)
T 2yd9_A 206 PRFSILP-MSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMP----VGRNVLELTDV--KDSANYTCVAMSSL 278 (304)
T ss_dssp EEEEECC-CCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCC----BSEEEEEECSC--CSCEEEEEEEEETT
T ss_pred CcEEecC-CceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCccccc----CCcEEEEEccc--ccCEEEEEEEEeCC
Confidence 5555555 35678899999999999999999999999999887654321 23345777665 68999999999999
Q ss_pred ceeeEEEE
Q psy16859 160 GSDRAFVT 167 (168)
Q Consensus 160 g~~~~~~~ 167 (168)
|.....+.
T Consensus 279 G~~~~~~~ 286 (304)
T 2yd9_A 279 GVIEAVAQ 286 (304)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEE
Confidence 99886654
No 33
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.94 E-value=4.4e-25 Score=150.99 Aligned_cols=142 Identities=26% Similarity=0.408 Sum_probs=113.4
Q ss_pred CCCceEEEEECCEecC-----CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcc
Q psy16859 1 YVKPEVIWLRGNTPLP-----KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVK 75 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~-----~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~ 75 (168)
+|.|.+.|++++..+. ....++..... +|.|.+++.+|+|.|+|.+.|..|.....+.|.|..
T Consensus 239 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~-----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~------- 306 (388)
T 2v5m_A 239 FPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSG-----TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTA------- 306 (388)
T ss_dssp ESCCEEEEEEECTTSSCEEECCCSSSEEEETT-----EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEE-------
T ss_pred CCCCEEEEEecCCCCcccccccccCceecccC-----EEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeC-------
Confidence 4889999999753321 12334433322 799999999999999999999999887788888854
Q ss_pred cCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 76 HEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
++.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+.... ..|.|.++..+|.|.|+|.|
T Consensus 307 ---~p~~~~~~-~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~~----------~~L~i~~v~~~d~G~Y~C~a 372 (388)
T 2v5m_A 307 ---PLSAKIDP-PTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSE----------SVLRIESVKKEDKGMYQCFV 372 (388)
T ss_dssp ---EEEEEEES-SEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEE
T ss_pred ---CCccccCC-CcEEecCCCCEEEEEEeccccCCeEEEEECCEECccCC----------CEEEEecCChhhCEEEEEEE
Confidence 33444455 46778899999999999999999999999998876421 37999999999999999999
Q ss_pred EcCCceeeEEEEC
Q psy16859 156 RNIYGSDRAFVTV 168 (168)
Q Consensus 156 ~n~~g~~~~~~~v 168 (168)
.|..|.....+.|
T Consensus 373 ~N~~G~~~~~~~l 385 (388)
T 2v5m_A 373 RNDRESAEASAEL 385 (388)
T ss_dssp ECSSCEEEEEEEE
T ss_pred EcCCCcEEEEEEE
Confidence 9999998876653
No 34
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.94 E-value=2.3e-25 Score=139.58 Aligned_cols=156 Identities=20% Similarity=0.316 Sum_probs=110.1
Q ss_pred CCC-ceEEEEECCEecCCC-CCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE---EEEEEEEeccCCCcc
Q psy16859 1 YVK-PEVIWLRGNTPLPKS-SPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET---FARVDVINVSSGAVK 75 (168)
Q Consensus 1 ~p~-p~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~---~~~l~v~~~~~~~~~ 75 (168)
+|. +.+.|++++..+... ..+...... + .+|.|.+++.+|+|.|+|.+.+..+.... ...+.+..... .
T Consensus 36 ~p~~~~v~W~~~~~~~~~~~~~~~~~~~~-~--~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~---~ 109 (201)
T 3s97_C 36 FPDDLSYRWLLNEFPVFITMDKRRFVSQT-N--GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERT---T 109 (201)
T ss_dssp ESSCCEEEEEESSTTCBCCCSSSEEECTT-T--CCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCSS---C
T ss_pred CCCceEEEEEECCceeeeeeCCCeEEEcC-C--CeEEECcCCcccCeEEEEEEEecCCCcchhhcccceeeccccc---c
Confidence 366 899999999876422 223332222 2 37999999999999999999987654433 23333322111 0
Q ss_pred cCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 76 HEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
...+|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ... .....|.|.++..+|.|.|+|.|
T Consensus 110 ~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~--~~~--~~~~~L~i~~v~~~d~G~Y~C~a 184 (201)
T 3s97_C 110 KPYPADIVVQF-KDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA--EIS--TSGAVLKIFNIQLEDEGIYECEA 184 (201)
T ss_dssp CCEEEEEEEEC-CCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTC--EEE--TTTTEEEECSCCGGGCEEEEEEE
T ss_pred CCCCCceEecC-CceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCce--eec--CCCCEEEEccCChhhCEEEEEEE
Confidence 11234444444 36778899999999999999999999999988665432 222 12247999999999999999999
Q ss_pred EcCCceeeEEEE
Q psy16859 156 RNIYGSDRAFVT 167 (168)
Q Consensus 156 ~n~~g~~~~~~~ 167 (168)
.|..|.....+.
T Consensus 185 ~n~~g~~~~~~~ 196 (201)
T 3s97_C 185 ENIRGKDKHQAR 196 (201)
T ss_dssp EETTEEEEEEEE
T ss_pred EecCCceeeeEE
Confidence 999998876654
No 35
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.94 E-value=7e-25 Score=145.92 Aligned_cols=161 Identities=15% Similarity=0.264 Sum_probs=118.1
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCC-c-ccCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGA-V-KHEK 78 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~-~-~~~~ 78 (168)
+|.|.+.|+|++..+. ...++.+... ++..+|.|.+++.+|+|.|+|.+.|..|... .+.+.|....... . ....
T Consensus 29 ~p~~~v~W~k~~~~i~-~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~l~v~~~~~~~~~~~~~~ 105 (312)
T 2y23_A 29 TPKSEFSWSKDYVSTE-DSPRLEVESK-GNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYLIDEEELKRLLALSHEHK 105 (312)
T ss_dssp CTTCCEEEEETTEECT-TCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEEECHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEECCEECC-CCCCEEEEEe-CCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEEEEEeeeeeeecccccCC
Confidence 4889999999999984 4568887776 6677999999999999999999999877443 4445542100000 0 0000
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEc-cCCCCeEEEeeCCEeccCCCCcEEEec--CCEEEEEEccCCCCCCeeEEEEE
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLA-GSPKPKVTWMKGIKDITTSSRTMTETV--NDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
+|.+...+.....+.+|+.+.|.|.+. +.|.+.+.|++++..+....++..... .....|.|.++..+|+|.|+|.+
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 185 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQL 185 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEE
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEE
Confidence 222222221366788999999999999 889999999999999887776655443 44567999999999999999999
Q ss_pred EcCCceeeE
Q psy16859 156 RNIYGSDRA 164 (168)
Q Consensus 156 ~n~~g~~~~ 164 (168)
.|..+....
T Consensus 186 ~~~~~~~~~ 194 (312)
T 2y23_A 186 QDGKATNHS 194 (312)
T ss_dssp ESSSCEEEE
T ss_pred EeCCceEEE
Confidence 886555443
No 36
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.94 E-value=4.3e-25 Score=145.71 Aligned_cols=153 Identities=21% Similarity=0.350 Sum_probs=111.7
Q ss_pred CCCceEEEEECCEecCC-CCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee--eEEEEEEEEeccCCCcccC
Q psy16859 1 YVKPEVIWLRGNTPLPK-SSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT--ETFARVDVINVSSGAVKHE 77 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~v~~~~~~~~~~~ 77 (168)
+|.|.+.|++++..+.. ...++.... ++ .|.|.+++.+|+|.|+|.+.|..+.. ...+.+.|..
T Consensus 127 ~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~--------- 193 (291)
T 1qz1_A 127 SLPPTIIWKHKGRDVILKKDVRFIVLS--NN--YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNV--------- 193 (291)
T ss_dssp SSCCEEEEEETTSCSSTTCCTTEEECT--TS--CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEE---------
T ss_pred CCCCEEEEEECCEEcccCCCceEEEcc--CC--cEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEec---------
Confidence 48899999999988743 233443332 22 69999999999999999999875433 2345566532
Q ss_pred CCCeEEecCC-cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCC--cEEEecCCEEEEEEccCCCCCCeeEEEE
Q psy16859 78 KPAMFLTRPD-TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSR--TMTETVNDYVRLTLKRATDDENGTYFIV 154 (168)
Q Consensus 78 ~~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 154 (168)
+|.+...+. ....+..|+.+.|.|.+.|.|.+.+.|++++..+..... ...........|.|.++..+|.|.|+|.
T Consensus 194 -~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 272 (291)
T 1qz1_A 194 -PPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCI 272 (291)
T ss_dssp -EEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEE
T ss_pred -CCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEE
Confidence 333333321 345677899999999999999999999999998876541 1222233345899999999999999999
Q ss_pred EEcCCceeeEEEE
Q psy16859 155 ARNIYGSDRAFVT 167 (168)
Q Consensus 155 ~~n~~g~~~~~~~ 167 (168)
|.|..|..+..+.
T Consensus 273 a~N~~G~~~~~~~ 285 (291)
T 1qz1_A 273 AENKAGEQDASIH 285 (291)
T ss_dssp EEETTEEEEEEEE
T ss_pred EEeCCCceEEEEE
Confidence 9999999876654
No 37
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.94 E-value=2.6e-24 Score=144.52 Aligned_cols=155 Identities=17% Similarity=0.257 Sum_probs=113.3
Q ss_pred CC-CceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcc--cceeeE----EEEEEEEeccCCC
Q psy16859 1 YV-KPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNE--YGYTET----FARVDVINVSSGA 73 (168)
Q Consensus 1 ~p-~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~--~~~~~~----~~~l~v~~~~~~~ 73 (168)
+| .|.+.|+|++..+.....++..... .|.|.+++.+|+|.|+|.+.|. .+.... .+.|.|...+.
T Consensus 155 ~p~~~~i~W~k~~~~l~~~~~~~~~~~~-----~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~-- 227 (329)
T 3oq3_B 155 AKHYNNITWYKNNQELIIDGTKYSQSGQ-----NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQD-- 227 (329)
T ss_dssp CCCCCEEEEEETTEECCCSSSSEEEETT-----EEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCC--
T ss_pred CCCCceEEEEECCccCCCCCceEecCCC-----EEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCC--
Confidence 46 8999999999998555566665533 8999999999999999999986 543333 36677754321
Q ss_pred cccCCCCeEEecCCcceEeecCCeEEEEEEEccCC---CC-eEEEeeCCEec-cCCCCcEEE--ecC--CEEEEEEccCC
Q psy16859 74 VKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSP---KP-KVTWMKGIKDI-TTSSRTMTE--TVN--DYVRLTLKRAT 144 (168)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p---~~-~~~W~~~~~~~-~~~~~~~~~--~~~--~~~~l~i~~~~ 144 (168)
...+ +. .+ ....+..|+.+.|.|.+.+.| .+ .+.|++++..+ ......... ... ....|.|.++.
T Consensus 228 ---~~~~-~~-~~-~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 301 (329)
T 3oq3_B 228 ---HRFK-LI-LD-PKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVT 301 (329)
T ss_dssp ---CCEE-EE-CC-SEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCC
T ss_pred ---CCCc-ee-cC-CeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEecc
Confidence 0012 22 44 457888999999999999987 77 89999998774 322221111 111 34689999999
Q ss_pred CCCCe-eEEEEEEcCCceeeEEEEC
Q psy16859 145 DDENG-TYFIVARNIYGSDRAFVTV 168 (168)
Q Consensus 145 ~~d~g-~y~C~~~n~~g~~~~~~~v 168 (168)
.+|.| .|+|.|.|..|.....++|
T Consensus 302 ~~D~G~~Y~C~a~N~~G~~~~~~~l 326 (329)
T 3oq3_B 302 EEYIGNTYTCRGHNYYFDKTLTTTV 326 (329)
T ss_dssp GGGTTCEEEEEEECSSCEEEEEEEE
T ss_pred HHHCCCcEEEEEEecCCceEEEEEE
Confidence 99999 9999999999998876653
No 38
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.94 E-value=9e-25 Score=145.38 Aligned_cols=161 Identities=13% Similarity=0.266 Sum_probs=114.1
Q ss_pred CCCceEEEEECCEecCCCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCC-------
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSG------- 72 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~------- 72 (168)
+|.|.+.|++++..+. ...++.+... ..+..+|.|.+++.+|+|.|+|.+.+...... ..+.+......
T Consensus 135 ~p~~~v~W~~~~~~i~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 211 (312)
T 2y23_A 135 SGNAKVNYIFNEKEIF-EGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNH--STVVLVGDVFKKLQKEAE 211 (312)
T ss_dssp CSSCEEEEEETTEEEC-SSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEE--EEEEECTHHHHHHHHHHH
T ss_pred CCCCEEEEEECCEECe-eCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEE--EEEEEcchhhhhhccccc
Confidence 4889999999999984 4456665543 25567899999999999999999976443332 23333100000
Q ss_pred ----CcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCC-eEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCC
Q psy16859 73 ----AVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKP-KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDE 147 (168)
Q Consensus 73 ----~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 147 (168)
+.....+|.+.... ...+..|+.+.|.|.+.+.|.+ .+.|++++..+....++... .....|.|.++..+|
T Consensus 212 ~~~~~~~~~~~p~~~~~~--~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~~d 287 (312)
T 2y23_A 212 FQRQEWIRKQGPHFVEYL--SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKD 287 (312)
T ss_dssp HHHHHHHHHHSSEEEEEE--EEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGG
T ss_pred ccccchhhccCCceeecc--eEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCHHH
Confidence 00001223333222 3678899999999999999988 99999999988755544433 334689999999999
Q ss_pred CeeEEEEEEcCCceeeEEEEC
Q psy16859 148 NGTYFIVARNIYGSDRAFVTV 168 (168)
Q Consensus 148 ~g~y~C~~~n~~g~~~~~~~v 168 (168)
+|.|+|.|.|..|.....+.|
T Consensus 288 ~G~Y~C~a~N~~G~~~~~~~l 308 (312)
T 2y23_A 288 AGIYEVILKDDRGKDKSRLKL 308 (312)
T ss_dssp CEEEEEEEESTTCCEEEEEEE
T ss_pred CEEEEEEEEcCCCceeeeeEE
Confidence 999999999999999877653
No 39
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.94 E-value=1.5e-25 Score=141.58 Aligned_cols=146 Identities=25% Similarity=0.380 Sum_probs=105.6
Q ss_pred CCCceEEEEECCEec-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc--eeeEEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPL-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG--YTETFARVDVI 67 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~~l~v~ 67 (168)
+|.|.+.|++++..+ .....++..... +|.|.+++.+|+|.|+|.+.+..+ .....+.|.|.
T Consensus 28 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-----~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~ 102 (212)
T 1f97_A 28 FSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSS-----GITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVL 102 (212)
T ss_dssp CSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETT-----EEEESCCCGGGCEEEEEEEEETTSSSEEEEEEEEEEE
T ss_pred CCCcEEEEEECCCceeeEEecCCcccccccCcEEeece-----eEEEcccCcccCeEEEEEEEccCCCcccEEEEEEEEE
Confidence 488999999987542 122345555443 899999999999999999999866 34456677775
Q ss_pred eccCCCcccCCCCeEEecCCcceEeecCCeEEEEEE-EccCCCCeEEEeeCCE-eccCCCCc-------EEEecCCEEEE
Q psy16859 68 NVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFR-LAGSPKPKVTWMKGIK-DITTSSRT-------MTETVNDYVRL 138 (168)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~-~~~~p~~~~~W~~~~~-~~~~~~~~-------~~~~~~~~~~l 138 (168)
.++. +...+ ....+..|+.+.|.|. +.+.|.+.+.|++++. .+...... ..........|
T Consensus 103 ~~p~----------~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L 171 (212)
T 1f97_A 103 VPPS----------KPTIS-VPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDL 171 (212)
T ss_dssp BCCC----------CCEEE-CCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCE
T ss_pred cCCC----------CcccC-CccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceE
Confidence 4321 11112 2346789999999999 7889999999999998 77653321 12222233579
Q ss_pred EEccCCCCCCeeEEEEEEcCCcee
Q psy16859 139 TLKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 139 ~i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
.|.++..+|.|.|+|.|.|..|..
T Consensus 172 ~i~~~~~~d~G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 172 IFDPVTAFDSGEYYCQAQNGYGTA 195 (212)
T ss_dssp EESSCCGGGCEEEEEEEECSSSCC
T ss_pred EEEecChhhCcEEEEEEccccCCc
Confidence 999999999999999999999987
No 40
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.93 E-value=3.9e-25 Score=136.27 Aligned_cols=136 Identities=15% Similarity=0.242 Sum_probs=99.5
Q ss_pred CCceEEEEECCEecC---------CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee--eEEEEEEEEecc
Q psy16859 2 VKPEVIWLRGNTPLP---------KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT--ETFARVDVINVS 70 (168)
Q Consensus 2 p~p~v~W~~~~~~~~---------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~v~~~~ 70 (168)
|.|.|.|+|++..+. ....|+.+.. .+ +|.|.+++.+|+|.|+|.+.|..|.. ...+.|.|..+.
T Consensus 26 ~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~--~g--sL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~ 101 (176)
T 1hng_A 26 DIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILA--NG--DLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMV 101 (176)
T ss_dssp TEEEEEEEETTEEEEEEETTSCCEESSTTEEECT--TS--CEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCC
T ss_pred ccccEEEEeCCceeEEEcCCCeecCCCCeEEECC--CC--cEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCC
Confidence 467999999996542 1245665532 23 59999999999999999999988876 456677774321
Q ss_pred CCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCee
Q psy16859 71 SGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGT 150 (168)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 150 (168)
..|.+. ..+..+.|.|.+.+.|.|.+.|++++..+....+ +.+..+..+|.|.
T Consensus 102 -------~~p~i~---------~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~-----------~~i~~~~~~d~G~ 154 (176)
T 1hng_A 102 -------SKPMIY---------WECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAP 154 (176)
T ss_dssp -------CCCEEE---------EETTTTEEEEECSSCSSCEEEEEETTEEEEEESS-----------SEEEEECSCCSSC
T ss_pred -------CCCEEE---------ecCCcEEEEEEecCCCCcEEEEEECCEECCCCCc-----------EEEEEEEccCCeE
Confidence 112221 2344589999999999999999999987764332 2333566899999
Q ss_pred EEEEEEcCCceeeEEEEC
Q psy16859 151 YFIVARNIYGSDRAFVTV 168 (168)
Q Consensus 151 y~C~~~n~~g~~~~~~~v 168 (168)
|+|.|.|..|.......|
T Consensus 155 Y~C~a~N~~g~~~~~~~l 172 (176)
T 1hng_A 155 FKCKAVNRVSQESEMEVV 172 (176)
T ss_dssp EEEEEEETTEEEEEEECC
T ss_pred EEEEEEecCCCceecccc
Confidence 999999999998876543
No 41
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.93 E-value=5.6e-25 Score=150.25 Aligned_cols=144 Identities=21% Similarity=0.375 Sum_probs=116.0
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|.+.|++++..+.. ++ . .....|.|.+++.+|+|.|+|.+.|..|.....+.|.|.. +|
T Consensus 234 ~p~~~i~W~~~~~~~~~---~~--~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----------~p 295 (382)
T 1cs6_A 234 NPVPQIKWRKLDGSQTS---KW--L---SSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHA----------QP 295 (382)
T ss_dssp ESCCEEEEEECCSCCSC---CC--S---BSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE----------EE
T ss_pred CCCCEEEEEECCccccc---EE--e---cCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEec----------CC
Confidence 47899999998877632 11 1 1223799999999999999999999998887788888853 34
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+....++... . ..|.|.++..+|+|.|+|.|.|..|
T Consensus 296 ~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~--~--~~L~i~~v~~~d~G~Y~C~a~N~~G 370 (382)
T 1cs6_A 296 DWLDVI-TDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVS--G--GELRFSKLVLEDSGMYQCVAENKHG 370 (382)
T ss_dssp EEEECC-CCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEE--T--TEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CcccCC-CccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEE--C--CEEEECcCCcccCEEEEEEEEeCCC
Confidence 445444 4567889999999999999999999999999988776554432 2 2799999999999999999999999
Q ss_pred eeeEEEE
Q psy16859 161 SDRAFVT 167 (168)
Q Consensus 161 ~~~~~~~ 167 (168)
.....+.
T Consensus 371 ~~~~~~~ 377 (382)
T 1cs6_A 371 TVYASAE 377 (382)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9886654
No 42
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.93 E-value=1.6e-25 Score=142.05 Aligned_cols=154 Identities=18% Similarity=0.336 Sum_probs=107.9
Q ss_pred CCCceEEEEECCEecCCCC-CceEEEecC-CCEEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEEeccCCCcccC
Q psy16859 1 YVKPEVIWLRGNTPLPKSS-PRFKYIEDS-NNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVINVSSGAVKHE 77 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~-~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~ 77 (168)
+|.|.+.|++++..+.... ......... .....|.|.+++.+|+|.|+|.+.|..+.... .+.|.|...
T Consensus 36 ~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~~-------- 107 (217)
T 2vr9_A 36 KPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVL-------- 107 (217)
T ss_dssp SSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETTEEEECCCEEEEECEE--------
T ss_pred CCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecCCCccccccceEEEEEe--------
Confidence 4889999999999885321 122222221 22223478899999999999999998776533 556666332
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEE-ccCCCCeEEEeeCCEeccCCCCcEEEecC-----CEEEEEEccCCCCCCeeE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRL-AGSPKPKVTWMKGIKDITTSSRTMTETVN-----DYVRLTLKRATDDENGTY 151 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~~~~~~~~~~~~-----~~~~l~i~~~~~~d~g~y 151 (168)
++.+...+ ....+..|+.+.|.|.+ .+.|.+.+.|++++..+............ ....|.|.++..+|.|.|
T Consensus 108 -~~~~~~~~-~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 185 (217)
T 2vr9_A 108 -RDDFRVEP-KDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNY 185 (217)
T ss_dssp -CCSCSBCC-CCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTTEEEESSCCSTTCEEE
T ss_pred -CCCcEECC-CccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCCcEEEeeCCHHHCeEE
Confidence 22233334 35678899999999998 88999999999999887733211111000 113799999999999999
Q ss_pred EEEEEcCCceeeE
Q psy16859 152 FIVARNIYGSDRA 164 (168)
Q Consensus 152 ~C~~~n~~g~~~~ 164 (168)
+|.|.|..|....
T Consensus 186 ~C~a~N~~G~~~~ 198 (217)
T 2vr9_A 186 KCIAQNLVGTRES 198 (217)
T ss_dssp EEEEEETTEEEEC
T ss_pred EEEEEcccceecc
Confidence 9999999998764
No 43
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.93 E-value=1.3e-24 Score=143.45 Aligned_cols=151 Identities=25% Similarity=0.387 Sum_probs=109.1
Q ss_pred CCCceEEEEECCEecCC-CCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee--EEEEEEEEeccCCCcccC
Q psy16859 1 YVKPEVIWLRGNTPLPK-SSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE--TFARVDVINVSSGAVKHE 77 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~l~v~~~~~~~~~~~ 77 (168)
+|.|.+.|++++..+.. ...++..... + +|.|.+++.+|+|.|+|.+.+..+... ..+.+.+..
T Consensus 125 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~--~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~--------- 191 (291)
T 2wim_A 125 SPAPAVSWLYHNEEVTTISDNRFAMLAN--N--NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNV--------- 191 (291)
T ss_dssp SSCCEEEEECC----CBCCCSSEEECTT--S--CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEB---------
T ss_pred CCCCEEEEEECCccccccCCceEEEccC--C--CEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEecc---------
Confidence 58899999999987743 3445544332 2 699999999999999999998764332 344555532
Q ss_pred CCCeEEecCC-cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 78 KPAMFLTRPD-TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 78 ~~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
+|.+...+. ....+..|+.+.|.|.+.+.|.+.+.|++++..+....++... .....|.|.++..+|+|.|+|.|.
T Consensus 192 -~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~ 268 (291)
T 2wim_A 192 -PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--GSNTELTVRNIINSDGGPYVCRAT 268 (291)
T ss_dssp -CCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEEC--STTCEEEEESCCSTTCEEEEEEEE
T ss_pred -CCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEc--CCccEEEEeeCCcccCEEEEEEEE
Confidence 222222221 1345678999999999999999999999999988766554432 223579999999999999999999
Q ss_pred cCCceeeEEEE
Q psy16859 157 NIYGSDRAFVT 167 (168)
Q Consensus 157 n~~g~~~~~~~ 167 (168)
|..|.....+.
T Consensus 269 N~~G~~~~~~~ 279 (291)
T 2wim_A 269 NKAGEDEKQAF 279 (291)
T ss_dssp ETTEEEEEEEE
T ss_pred ECCCceeeeEE
Confidence 99999886654
No 44
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.93 E-value=6.7e-26 Score=152.30 Aligned_cols=160 Identities=20% Similarity=0.377 Sum_probs=114.6
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|.+.|++++..+... .++..........+|.|.+++.+|+|.|+|.+.|..|.....+.|.|...+. .+|
T Consensus 150 ~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~------~~p 222 (334)
T 1ry7_B 150 NPTPSISWLKNGREFRGE-HRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSP------HRP 222 (334)
T ss_dssp SSCCEEECCBTTBCCCTT-SSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCC------SSC
T ss_pred CCCCeEEEEECCEECccc-ccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCC------CCC
Confidence 488999999999887432 2221111112334899999999999999999999988887788888865322 223
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEee----CCEeccCCCCcE--EEe-------cCCEEEEEEccCCCCC
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMK----GIKDITTSSRTM--TET-------VNDYVRLTLKRATDDE 147 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~----~~~~~~~~~~~~--~~~-------~~~~~~l~i~~~~~~d 147 (168)
.+.........+..|+.+.|.|.+.+.|.+.+.|++ ++..+....... ... ......|.|.++..+|
T Consensus 223 ~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 302 (334)
T 1ry7_B 223 ILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFED 302 (334)
T ss_dssp BCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTS
T ss_pred ceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHH
Confidence 333222246678899999999999999999999999 565554332211 000 0112379999999999
Q ss_pred CeeEEEEEEcCCceeeEEEE
Q psy16859 148 NGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 148 ~g~y~C~~~n~~g~~~~~~~ 167 (168)
+|.|+|.|.|..|.....+.
T Consensus 303 ~G~Y~C~a~N~~G~~~~~~~ 322 (334)
T 1ry7_B 303 AGEYTCLAGNSIGFSHHSAW 322 (334)
T ss_dssp CSEEEEEEEESSCCEEEEEE
T ss_pred CEEEEEEEeCCCCeEEEEEE
Confidence 99999999999998876654
No 45
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.93 E-value=1.9e-24 Score=135.80 Aligned_cols=150 Identities=13% Similarity=0.135 Sum_probs=106.5
Q ss_pred ceEEEEECCEecCCCCCceEEEec--CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCe
Q psy16859 4 PEVIWLRGNTPLPKSSPRFKYIED--SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAM 81 (168)
Q Consensus 4 p~v~W~~~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~ 81 (168)
+.+.|++++..+.....|+.+..+ ..+..+|.|.+++.+|+|.|+|.+.+..+.....+.|.|..++. .|.
T Consensus 37 ~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~-------~p~ 109 (202)
T 3bp6_B 37 IRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASYM-------RID 109 (202)
T ss_dssp EEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCC-------CEE
T ss_pred eEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCCcceEEEEEEecCCCC-------ccc
Confidence 789999944444344556665543 12557999999999999999999999888777778888854321 222
Q ss_pred EEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCce
Q psy16859 82 FLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
+.. ..+..|+.+.|.|.+.|.|.|.+.|++++..+.. .......+....+.+..+..+|.|.|+|.|.|..|.
T Consensus 110 ~~~-----~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~ 182 (202)
T 3bp6_B 110 TRI-----LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT--SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMK 182 (202)
T ss_dssp EEE-----EECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE--EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTT
T ss_pred EEE-----EecCCCCeEEEEEEccccCCceEEEEeCCCCccC--ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcc
Confidence 221 2345799999999999999999999987764421 111111222356677788899999999999999998
Q ss_pred eeEEEE
Q psy16859 162 DRAFVT 167 (168)
Q Consensus 162 ~~~~~~ 167 (168)
....+.
T Consensus 183 ~~~~~~ 188 (202)
T 3bp6_B 183 ELTSAI 188 (202)
T ss_dssp EEEEEE
T ss_pred cccEEE
Confidence 876553
No 46
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.93 E-value=9e-24 Score=134.28 Aligned_cols=141 Identities=22% Similarity=0.412 Sum_probs=108.8
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee-eEEEEEEEEeccCCCc-----
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT-ETFARVDVINVSSGAV----- 74 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~----- 74 (168)
+|.|.+.|++++..+.... . .+|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|...+....
T Consensus 45 ~p~~~v~W~~~~~~~~~~~---------~--~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~ 113 (218)
T 3k0w_A 45 HPFVQYQWFKMNKEIPNGN---------T--SELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDG 113 (218)
T ss_dssp TTSSEEEEEETTEECTTCC---------S--SEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCS
T ss_pred CCCCEEEEEECCEECCCCC---------C--CEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCccccccccc
Confidence 4789999999999884321 1 279999999999999999999987654 3357777765432100
Q ss_pred ccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEE
Q psy16859 75 KHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIV 154 (168)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 154 (168)
....++.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+..... ..|.|.++..+|.|.|+|.
T Consensus 114 ~~~~~p~~~~~~-~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~ 183 (218)
T 3k0w_A 114 VSESKLQICVEP-TSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEHQGTYWCH 183 (218)
T ss_dssp BCCSSCEEEECC-CCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCS---------SEEEESSCCGGGCEEEEEE
T ss_pred ccCCCceEEECC-CceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCC---------CEEEEeecChhcCEEEEEE
Confidence 011224555555 467788999999999999999999999999988765321 3799999999999999999
Q ss_pred EEcCCcee
Q psy16859 155 ARNIYGSD 162 (168)
Q Consensus 155 ~~n~~g~~ 162 (168)
|.|..|..
T Consensus 184 a~n~~g~~ 191 (218)
T 3k0w_A 184 VYNDRDSQ 191 (218)
T ss_dssp EECSSCEE
T ss_pred EEcCCCCc
Confidence 99988873
No 47
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.93 E-value=1.6e-23 Score=129.73 Aligned_cols=143 Identities=18% Similarity=0.306 Sum_probs=105.6
Q ss_pred CCc--eEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 2 VKP--EVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 2 p~p--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
|.| .+.|++++..+.... .. .....|.|. +.+|+|.|+|.+.+. ....+.|.|. .+
T Consensus 26 ~~p~~~~~W~k~~~~l~~~~-~~------~~~~~l~i~--~~~d~G~Y~C~~~n~---~~~~~~l~V~----------~~ 83 (184)
T 3b5h_A 26 ATEVTGHRWLKGGVVLKEDA-LP------GQKTEFKVD--SDDQWGEYSCVFLPE---PMGTANIQLH----------GP 83 (184)
T ss_dssp SSCCCEEEEESSSEEEECTT-CC------CSEEEEEEC--GGGCCEEEEEEEEST---TSCEEEEEEC----------CS
T ss_pred CCCceEEEEEeCCEEeeccc-cc------CCcEEEEEe--chhhCeEEEEEEECC---cCcEEEEEEe----------cC
Confidence 555 999999998884322 11 223467776 689999999999973 2245667773 34
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCC-CCeEEEee---CC-EeccCC--CCcEEEecCCEEEEEEccCC-CCCCeeE
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSP-KPKVTWMK---GI-KDITTS--SRTMTETVNDYVRLTLKRAT-DDENGTY 151 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~~~W~~---~~-~~~~~~--~~~~~~~~~~~~~l~i~~~~-~~d~g~y 151 (168)
|.+...+ ....+..|+.+.|.|.+.+.| .+.+.|++ ++ ..+... .++..........|.|.++. .+|.|.|
T Consensus 84 P~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y 162 (184)
T 3b5h_A 84 PRVKAVK-SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQY 162 (184)
T ss_dssp CCCEESC-SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEE
T ss_pred CceeecC-CCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceE
Confidence 4555555 456788999999999999999 79999999 34 444322 44555555556789999999 8999999
Q ss_pred EEEEEcCCceeeEEEE
Q psy16859 152 FIVARNIYGSDRAFVT 167 (168)
Q Consensus 152 ~C~~~n~~g~~~~~~~ 167 (168)
+|.|.|..|.....+.
T Consensus 163 ~C~a~N~~g~~~~~~~ 178 (184)
T 3b5h_A 163 RCNGTSSKGSDQAIIT 178 (184)
T ss_dssp EEEEEETTEEEEEEEE
T ss_pred EEEEEeCCCcceEEEE
Confidence 9999999998876654
No 48
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.93 E-value=6.8e-25 Score=141.86 Aligned_cols=127 Identities=18% Similarity=0.235 Sum_probs=92.2
Q ss_pred EEEEEcCCCCCCCeEEEEEEEccccee-----eEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc
Q psy16859 32 HTLILSGVTAEEAGKYTCRVSNEYGYT-----ETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG 106 (168)
Q Consensus 32 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~-----~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~ 106 (168)
.+|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|...+ .++.+...+...+.+.+|+.+.|.|.+.+
T Consensus 90 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~-------~~~~~~~~~~~~~~v~~g~~v~L~C~~~g 162 (250)
T 2fbo_J 90 PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHT-------PSNNVHVSTAEVVQVDEGNDITMTCPCTD 162 (250)
T ss_dssp CCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTS-------CCSCCEECCCSEEECCTTCCEEECCCEES
T ss_pred ceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccC-------CCCeEEEecCceEEecCCCcEEEEEEecC
Confidence 479999999999999999999876543 336667774321 23444444445677788999999999999
Q ss_pred CCCCeEEEeeCCEeccCCCCcE----------------------EEecCCEEEEEEccCCCCCCeeEEEEEEc---CCce
Q psy16859 107 SPKPKVTWMKGIKDITTSSRTM----------------------TETVNDYVRLTLKRATDDENGTYFIVARN---IYGS 161 (168)
Q Consensus 107 ~p~~~~~W~~~~~~~~~~~~~~----------------------~~~~~~~~~l~i~~~~~~d~g~y~C~~~n---~~g~ 161 (168)
.|.|.+.|++++..+....... .... ....|.|.++..+|+|.|+|.|.| ..|.
T Consensus 163 ~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~ 241 (250)
T 2fbo_J 163 CANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFS-GARNLVIRAAKITDAGRVWCELATGQGELDA 241 (250)
T ss_dssp CTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEE-TTTEEEECSCCGGGCEEEEEEEESSSSGGGE
T ss_pred CCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccC-CccEEEEecCCcccCEEEEEEecCCccccCc
Confidence 9999999999987765432111 0000 114799999999999999999999 4455
Q ss_pred eeEEE
Q psy16859 162 DRAFV 166 (168)
Q Consensus 162 ~~~~~ 166 (168)
....+
T Consensus 242 ~~~~~ 246 (250)
T 2fbo_J 242 DRSST 246 (250)
T ss_dssp EEEEE
T ss_pred cceeE
Confidence 55444
No 49
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.93 E-value=8.8e-24 Score=139.42 Aligned_cols=147 Identities=20% Similarity=0.360 Sum_probs=112.1
Q ss_pred CCceEEEEE-CCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccce-eeEEEEEEEEeccCCCcccCCC
Q psy16859 2 VKPEVIWLR-GNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGY-TETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 2 p~p~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
|.+.+.|++ ++..+.....++.+........+|.|.+++.+|+|.|+|.+.+..+. ....+.|.|. .+
T Consensus 31 ~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~----------~~ 100 (291)
T 1qz1_A 31 KDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIF----------QK 100 (291)
T ss_dssp SCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEE----------CC
T ss_pred CCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEee----------cc
Confidence 368999999 78877655667766543245679999999999999999999998754 3446667663 34
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
+.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+............ ...|.|.++..+|.|.|+|.+.|..
T Consensus 101 ~~~~~~~-~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~a~n~~ 178 (291)
T 1qz1_A 101 LMFKNAP-TPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLS-NNYLQIRGIKKTDEGTYRCEGRILA 178 (291)
T ss_dssp SEEEECC-SSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECT-TSCEEETTCCGGGCEEEEEEEEEGG
T ss_pred ccccCCC-CcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEcc-CCcEEEccCccccCeEEEEEEEecC
Confidence 5555555 4677889999999999999999999999998876543322222222 2369999999999999999999976
Q ss_pred c
Q psy16859 160 G 160 (168)
Q Consensus 160 g 160 (168)
+
T Consensus 179 ~ 179 (291)
T 1qz1_A 179 R 179 (291)
T ss_dssp G
T ss_pred C
Confidence 4
No 50
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.92 E-value=5e-25 Score=148.90 Aligned_cols=157 Identities=19% Similarity=0.247 Sum_probs=86.7
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccc-cee---eEEEEEEEEeccCCCccc
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEY-GYT---ETFARVDVINVSSGAVKH 76 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-~~~---~~~~~l~v~~~~~~~~~~ 76 (168)
+|.|.+.|+|++..+. ...++..... .|.|.+++.+|+|.|+|.+.|.. +.. ...+.|.|...+. .
T Consensus 152 ~p~~~v~W~k~~~~l~-~~~~~~~~~~-----~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~----~ 221 (349)
T 4dep_C 152 SVKPTITWYMGCYKIQ-NFNNVIPEGM-----NLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPK----N 221 (349)
T ss_dssp TSCCEEEEEETTEECC-SCSSEEEETT-----EEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGG----G
T ss_pred CCCceEEEeeCCEECC-CccceeecCC-----EEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCC----C
Confidence 4889999999999883 3334433332 79999999999999999999986 443 3456666643221 0
Q ss_pred CCCCeEEecCCcc-eEeecCCeEEEEEEEc----cCCCCeEEEeeCCEeccC-CCCcEEEe-----c-CC---EEEEEEc
Q psy16859 77 EKPAMFLTRPDTM-MSVALGEDISFSFRLA----GSPKPKVTWMKGIKDITT-SSRTMTET-----V-ND---YVRLTLK 141 (168)
Q Consensus 77 ~~~~~~~~~~~~~-~~~~~g~~~~l~C~~~----~~p~~~~~W~~~~~~~~~-~~~~~~~~-----~-~~---~~~l~i~ 141 (168)
..+|.+...+... ..+..|+.+.|.|.+. +.|.+.+.|++++..+.. ..+..... . .. ..+|.|.
T Consensus 222 ~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 301 (349)
T 4dep_C 222 AVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIK 301 (349)
T ss_dssp CCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC---
T ss_pred CCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEe
Confidence 1144444333222 2678999999999998 568899999999887654 22211100 0 11 2459999
Q ss_pred cCCCCCC-eeEEEEEEcCCceeeEEEE
Q psy16859 142 RATDDEN-GTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 142 ~~~~~d~-g~y~C~~~n~~g~~~~~~~ 167 (168)
++..+|. |.|+|.|.|..|.....+.
T Consensus 302 ~v~~~d~~G~Y~C~a~N~~G~~~~~~~ 328 (349)
T 4dep_C 302 KVTSEDLKRSYVCHARSAKGEVAKAAK 328 (349)
T ss_dssp ----------CEEEEECSSCEEEEECC
T ss_pred eccHHHcCCcEEEEEEcCCCcEEEEEE
Confidence 9999999 9999999999999886654
No 51
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.92 E-value=6.9e-24 Score=153.50 Aligned_cols=141 Identities=24% Similarity=0.392 Sum_probs=113.9
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEEeccCCCcccCCCC
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~~~~ 80 (168)
|.|.+.|++++..+. ...++.+... + .+|.|.+++.+|+|.|+|.+.|..|.... .+.|.|... |+
T Consensus 494 ~~~~i~W~~~g~~l~-~~~~~~~~~~-~--~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~---------p~ 560 (642)
T 1e07_A 494 QNTTYLWWVNGQSLP-VSPRLQLSNG-N--RTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYG---------PD 560 (642)
T ss_pred CCcEEEEEECCEeCC-CCCcEEEcCC-C--cEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeC---------CC
Confidence 788999999999984 4456665433 2 48999999999999999999999887654 578888532 33
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+... ..|.|.++..+|.|.|+|.|.|..|
T Consensus 561 ~~~~~~-~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~-----------~~L~i~~~~~~d~G~Y~C~a~N~~G 628 (642)
T 1e07_A 561 TPIISP-PDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHT-----------QVLFIAKITPNNNGTYACFVSNLAT 628 (642)
T ss_pred cceecC-CceeEEcCCcEEEEEEeccCCCCeEEEEECCEECccC-----------ceEEECcccccCCeEEEEEEEeccc
Confidence 344444 4577889999999999999999999999999877532 3699999999999999999999999
Q ss_pred eeeEEEE
Q psy16859 161 SDRAFVT 167 (168)
Q Consensus 161 ~~~~~~~ 167 (168)
.....+.
T Consensus 629 ~~~~s~~ 635 (642)
T 1e07_A 629 GRNNSIV 635 (642)
T ss_pred CcceeEE
Confidence 8875543
No 52
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.92 E-value=4.4e-24 Score=135.27 Aligned_cols=153 Identities=12% Similarity=0.103 Sum_probs=102.6
Q ss_pred CCceEEEEEC---CEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEEeccCCCcccC
Q psy16859 2 VKPEVIWLRG---NTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVINVSSGAVKHE 77 (168)
Q Consensus 2 p~p~v~W~~~---~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~ 77 (168)
|.|.+.|+++ +..+. ...++..... . .|.|.+++.+|+|.|+|.+.+..+.... .+.|.|.. .
T Consensus 36 p~~~v~w~~~~~~g~~~~-~~~~~~~~~~--~--~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~--------~ 102 (213)
T 2x1w_L 36 SNLNVSLCARYPEKRFVP-DGNRISWDSK--K--GFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVG--------Y 102 (213)
T ss_dssp TTCCEEEEEETTTEEECC-CSSSCEEETT--T--EEEEEGGGTTTCSEEEEEEC----CEECCCEEEEECB--------C
T ss_pred CCcEEEEEhhcCCCcccc-CCCcccccCC--c--cEEEccCChhcCceEEEEEEECCeeEEEEEEEEEEeC--------C
Confidence 6789999984 66663 3334433322 2 6999999999999999999885443332 25666622 1
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCC--CCeEEEeeCCEeccCCCC-cEEEe-------cCCEEEEEEccCCCCC
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSP--KPKVTWMKGIKDITTSSR-TMTET-------VNDYVRLTLKRATDDE 147 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~~~~~~~~~~-~~~~~-------~~~~~~l~i~~~~~~d 147 (168)
.++.+...+...+.+..|+.++|.|.+.+.| .+.+.|++++..+..... ..... .....+|.|.+++.+|
T Consensus 103 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 182 (213)
T 2x1w_L 103 RIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSD 182 (213)
T ss_dssp CEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGG
T ss_pred cccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCccc
Confidence 2334444454556889999999999999855 457999998765432111 00100 1113579999999999
Q ss_pred CeeEEEEEEcCCceeeEEEE
Q psy16859 148 NGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 148 ~g~y~C~~~n~~g~~~~~~~ 167 (168)
+|.|+|.|.|..|..+..+.
T Consensus 183 ~G~Y~C~a~N~~g~~~~~~~ 202 (213)
T 2x1w_L 183 QGLYTCAASSGLMTKKNSTF 202 (213)
T ss_dssp CEEEEEEEECSSCEEEEEEE
T ss_pred CEEEEEEEecCCCcEEEEEE
Confidence 99999999999998876654
No 53
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.92 E-value=3.4e-25 Score=149.19 Aligned_cols=158 Identities=17% Similarity=0.296 Sum_probs=116.4
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc----eeeEEEEEEEEeccCCCccc
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG----YTETFARVDVINVSSGAVKH 76 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~~~~~~~~~ 76 (168)
+|.|.+.|++++..+.....++..... . ..|.|.+++.+|+|.|+|.+.|..+ .....+.|.|.....
T Consensus 152 ~p~~~v~W~k~g~~~~~~~~~~~~~~~-~--~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~----- 223 (339)
T 3o4o_C 152 KTDVKIQWYKDSLLLDKDNEKFLSVRG-T--THLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKE----- 223 (339)
T ss_dssp SSCCCBCCEESSCBCCTTCSSEEECTT-S--SEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCC-----
T ss_pred CCCceEEEecCCeeCCCCCceeEEcCC-c--ceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCC-----
Confidence 478999999999988655556655443 2 2799999999999999999999876 344567777765432
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEE---ccCC-CCeEEEeeCCEeccCCC---------CcEEEecCC---EEEEEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRL---AGSP-KPKVTWMKGIKDITTSS---------RTMTETVND---YVRLTL 140 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~---~~~p-~~~~~W~~~~~~~~~~~---------~~~~~~~~~---~~~l~i 140 (168)
..+|.+...+ ....+..|+.+.|.|.+ .|.| .+.+.|++++..+.... +......+. ...|.|
T Consensus 224 ~~~P~i~~~~-~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i 302 (339)
T 3o4o_C 224 ETIPVIISPL-KTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIF 302 (339)
T ss_dssp CCCCEECCCS-CCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEE
T ss_pred CCCCEEecCC-ceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEE
Confidence 2345555444 56678899999999999 8888 88899999887654321 111111111 126999
Q ss_pred ccCCCCCC-eeEEEEEEcCCceeeEEEE
Q psy16859 141 KRATDDEN-GTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 141 ~~~~~~d~-g~y~C~~~n~~g~~~~~~~ 167 (168)
.++..+|. |.|+|.|.|..|...+.+.
T Consensus 303 ~~v~~~d~~G~Y~C~a~N~~G~~~~~~~ 330 (339)
T 3o4o_C 303 DPVTREDLHMDFKCVVHNTLSFQTLRTT 330 (339)
T ss_dssp CSSCCCSCCCCCEEEEEETTEEECCBCC
T ss_pred EEechhhcCccEEEEEEeccCceEEEEE
Confidence 99999997 9999999999999886543
No 54
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.92 E-value=2.1e-23 Score=131.45 Aligned_cols=145 Identities=17% Similarity=0.241 Sum_probs=107.0
Q ss_pred CCceEEEEECCEecCC------------------CCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccc-ceeeEEE
Q psy16859 2 VKPEVIWLRGNTPLPK------------------SSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEY-GYTETFA 62 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~ 62 (168)
|.+.+.||+++..... ...|+.+.. + .+|.|.+++.+|+|.|+|.+.+.. +.....+
T Consensus 27 ~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~--~--~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~ 102 (208)
T 3r4d_A 27 ALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYS--N--GSLLFQMITMKDMGVYTLDMTDENYRRTQATV 102 (208)
T ss_dssp SCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECT--T--SCEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEec--C--CeEEEccccccCCeEEEEEEEcccCceeEEEE
Confidence 6789999997542210 122333322 1 269999999999999999999885 4455567
Q ss_pred EEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEcc
Q psy16859 63 RVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKR 142 (168)
Q Consensus 63 ~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 142 (168)
.|.|...+ ..+.+...+. . +..|+.+.|.|.+.+.| +.+.|++++..+....++...... .+|.|.+
T Consensus 103 ~l~V~~~~-------~~p~i~~~~~-~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~~~--~~L~i~~ 169 (208)
T 3r4d_A 103 RFHVHQPV-------TQPFLQVTNT-T--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQNN--SILRIDP 169 (208)
T ss_dssp EEEEECCC-------CCCEEEESCS-S--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEETTT--TEEEESS
T ss_pred EEEeccCC-------CCCEEecCCc-e--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcCCC--CEEEEec
Confidence 77775432 2344444442 2 78999999999999866 799999999988766655544332 4799999
Q ss_pred CCCCCCeeEEEEEEcCCceee
Q psy16859 143 ATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 143 ~~~~d~g~y~C~~~n~~g~~~ 163 (168)
+..+|.|.|+|.|.|..|...
T Consensus 170 v~~~d~G~Y~C~a~N~~g~~~ 190 (208)
T 3r4d_A 170 IKREDAGEYQCEISNPVSVRR 190 (208)
T ss_dssp CCGGGCEEEEEEEECTTCCEE
T ss_pred cCHHhCeEEEEEEecCCCccc
Confidence 999999999999999999875
No 55
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.92 E-value=8.3e-24 Score=139.61 Aligned_cols=154 Identities=13% Similarity=0.169 Sum_probs=113.3
Q ss_pred CC-ceEEEE-ECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCe-EEEEEEEcccceeeE-EEEEEEEeccCCCcccC
Q psy16859 2 VK-PEVIWL-RGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAG-KYTCRVSNEYGYTET-FARVDVINVSSGAVKHE 77 (168)
Q Consensus 2 p~-p~v~W~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~ 77 (168)
|. |.+.|+ +++..+. ...++..... + .|.|.+++.+|+| .|+|.+.|..+.... .+.|.|.... .
T Consensus 118 p~~~~v~W~~~~g~~l~-~~~~~~~~~~--~--~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~------~ 186 (290)
T 2o26_X 118 PQVSQYSLIECDGKSLP-TDLTFVPNPK--A--GITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAI------K 186 (290)
T ss_dssp CSCEEEEEEETTSCCCC-TTCEEEEETT--T--EEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCC------C
T ss_pred CCCceEEEEeCCCcCCC-CCCceeeCCC--C--CEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCC------C
Confidence 66 899995 6887773 3445544433 2 6999999999999 999999998555433 5777775322 2
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCe-EEEeeCCEec----cCCCCcEEEe---cCCEEEEEEccCCCCCCe
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPK-VTWMKGIKDI----TTSSRTMTET---VNDYVRLTLKRATDDENG 149 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~~~~~~----~~~~~~~~~~---~~~~~~l~i~~~~~~d~g 149 (168)
.+|.+...+ ....+..|+.+.|.|.+.+.|.+. +.|++++..+ .......... ......|.|.++..+|+|
T Consensus 187 ~~P~i~~~~-~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G 265 (290)
T 2o26_X 187 AIPVVSVPE-TSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSG 265 (290)
T ss_dssp SCCEEECSC-SBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCE
T ss_pred CCCccccCC-CcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCe
Confidence 466666655 345788999999999999999886 9999988763 3222222221 122468999999999999
Q ss_pred eEEEEEEcCCceeeEEEE
Q psy16859 150 TYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 150 ~y~C~~~n~~g~~~~~~~ 167 (168)
.|+|.|.|..|.....+.
T Consensus 266 ~Y~C~a~N~~g~~~~~~~ 283 (290)
T 2o26_X 266 VFMCYANNTFGSANVTTT 283 (290)
T ss_dssp EEEEEEECSSCEEEEEEE
T ss_pred EEEEEEeCCCCcEEEEEE
Confidence 999999999999886654
No 56
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.92 E-value=2.2e-24 Score=136.25 Aligned_cols=150 Identities=20% Similarity=0.383 Sum_probs=107.1
Q ss_pred CCCceEEEEECCEecCCCCC---ceEEEecCCCE--EEEEEcCCCCCCCeEEEEEEEccccee-eEEEEEEEEeccCCCc
Q psy16859 1 YVKPEVIWLRGNTPLPKSSP---RFKYIEDSNNL--HTLILSGVTAEEAGKYTCRVSNEYGYT-ETFARVDVINVSSGAV 74 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~---~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~ 74 (168)
+|.|.+.|++++..+..... ........+.. ..|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|...
T Consensus 36 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~----- 110 (212)
T 2v9r_A 36 RPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAIL----- 110 (212)
T ss_dssp ESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEEEECCCEEEEECEE-----
T ss_pred CCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCceeecceEEEEEec-----
Confidence 37889999999998753221 11222221221 134556789999999999999987765 33566666432
Q ss_pred ccCCCCeEEecCCcceEeecCCeEEEEEEE-ccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 75 KHEKPAMFLTRPDTMMSVALGEDISFSFRL-AGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
++.+...+ ....+..|+.+.|.|.+ .+.|.+.+.|++++..+........... ..|.|.++..+|.|.|+|
T Consensus 111 ----~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C 182 (212)
T 2v9r_A 111 ----RDDFRQNP-SDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRG---GKLMITYTRKSDAGKYVC 182 (212)
T ss_dssp ----CSSCSBCC-CCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEET---TEEEESSCCGGGCEEEEE
T ss_pred ----cccceeCC-CceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccC---CeEEEeeCCHhhCeeEEE
Confidence 22233334 45678899999999998 8899999999999998876543332222 279999999999999999
Q ss_pred EEEcCCceee
Q psy16859 154 VARNIYGSDR 163 (168)
Q Consensus 154 ~~~n~~g~~~ 163 (168)
.|.|..|...
T Consensus 183 ~a~N~~g~~~ 192 (212)
T 2v9r_A 183 VGTNMVGERE 192 (212)
T ss_dssp EEEETTEEEE
T ss_pred EEecccCcee
Confidence 9999999754
No 57
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.92 E-value=2.5e-23 Score=138.80 Aligned_cols=149 Identities=14% Similarity=0.166 Sum_probs=107.2
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCC----EEEEEEcCCCCCCCeEEEEEEEcccceeeE--EEEEEEEeccCCCc
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNN----LHTLILSGVTAEEAGKYTCRVSNEYGYTET--FARVDVINVSSGAV 74 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~--~~~l~v~~~~~~~~ 74 (168)
+|.|++.|++++..+.. ..+ ......+ ...|.|..+..+|+|.|+|.+.|..+.... .+.|.|.
T Consensus 145 ~P~~~i~W~~~~~~~~~-~~~--~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~------- 214 (313)
T 4fqp_A 145 RPPAQITWHSDLGGMPN-TSQ--VPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY------- 214 (313)
T ss_dssp BSCCEEEEEETTCCEEE-EEE--EECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBC-------
T ss_pred cCCcEEEeecCCccccc-cce--eeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccc-------
Confidence 58999999999876621 111 1111111 235899999999999999999997665444 3444442
Q ss_pred ccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCC-eEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 75 KHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKP-KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
.+|.+...+.....+..|..+.|.|.+.|.|.| .+.|++++..+.... .. .. .+|.|.++..+|+|.|+|
T Consensus 215 ---~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~---~~-~~--~~L~i~~v~~~d~G~Y~C 285 (313)
T 4fqp_A 215 ---YPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA---VA-QG--AQLLIRPVDKPINTTLIC 285 (313)
T ss_dssp ---EEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE---EE-ET--TEEEECCCSSCCEEEEEE
T ss_pred ---cCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce---EE-eC--CEEEECcCChhhCEEEEE
Confidence 244454444445567788999999999999988 699999998775421 11 12 279999999999999999
Q ss_pred EEEcCCceeeEEEEC
Q psy16859 154 VARNIYGSDRAFVTV 168 (168)
Q Consensus 154 ~~~n~~g~~~~~~~v 168 (168)
.|.|..|..+..+.|
T Consensus 286 ~a~N~~G~~~~~~~l 300 (313)
T 4fqp_A 286 NVTNALGARQAELTV 300 (313)
T ss_dssp EEECSSCEEEEEEEE
T ss_pred EEEeCCCcEEEEEEE
Confidence 999999998876643
No 58
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.92 E-value=4.9e-25 Score=138.88 Aligned_cols=146 Identities=25% Similarity=0.350 Sum_probs=105.5
Q ss_pred CCCceEEEEECCEec-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccce--eeEEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPL-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGY--TETFARVDVI 67 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~ 67 (168)
+|.|.+.|++++..+ .....++..... +|.|.+++.+|+|.|+|.+.+..+. ....+.|.|.
T Consensus 31 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-----~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~ 105 (209)
T 1nbq_A 31 FSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPT-----GITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVL 105 (209)
T ss_dssp CSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETT-----EEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEE
T ss_pred CCCcEEEEEEcCCceeEEEEecCccCccccCceEeecc-----EEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEe
Confidence 488999999987542 122345554433 8999999999999999999987553 3345666675
Q ss_pred eccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEE-ccCCCCeEEEeeCCEeccCCCCc-------EEEecCCEEEEE
Q psy16859 68 NVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRL-AGSPKPKVTWMKGIKDITTSSRT-------MTETVNDYVRLT 139 (168)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~~~~~~-------~~~~~~~~~~l~ 139 (168)
.++. +...+ ....+..|+.+.|.|.+ .+.|.+.+.|++++..+...... ..........|.
T Consensus 106 ~~p~----------~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 174 (209)
T 1nbq_A 106 VPPS----------KPTVN-IPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELV 174 (209)
T ss_dssp BCCC----------CCCCC-CBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEE
T ss_pred cCCc----------CCCcc-cccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEE
Confidence 4322 11112 23457899999999996 88999999999998877654321 011111235799
Q ss_pred EccCCCCCCeeEEEEEEcCCcee
Q psy16859 140 LKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 140 i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
|.++..+|.|.|+|.|.|..|..
T Consensus 175 i~~~~~~d~G~Y~C~a~n~~g~~ 197 (209)
T 1nbq_A 175 FDPLSASDTGEYSCEARNGYGTP 197 (209)
T ss_dssp ESSCCGGGCCCEEEEEECSSSCC
T ss_pred EEeccccCCeEEEEEEeCCcCcc
Confidence 99999999999999999999988
No 59
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.92 E-value=4.1e-24 Score=135.03 Aligned_cols=151 Identities=19% Similarity=0.304 Sum_probs=106.7
Q ss_pred CceEEEEE----------------CCEecC----CCCCceEEEec--CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE
Q psy16859 3 KPEVIWLR----------------GNTPLP----KSSPRFKYIED--SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET 60 (168)
Q Consensus 3 ~p~v~W~~----------------~~~~~~----~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 60 (168)
.+.+.|++ ++..+. ....|+.+... ..+..+|.|.+++.+|+|.|+|.+.+..+....
T Consensus 33 ~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~ 112 (214)
T 3jz7_A 33 PLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANK 112 (214)
T ss_dssp CCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred cEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEccCChhhCeEEEEEEEeCCCcccc
Confidence 47999988 444432 11345554331 123457999999999999999999998887777
Q ss_pred EEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEE-ccCCCCeEEEeeCC--EeccCCCCcEEEecCCEEE
Q psy16859 61 FARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRL-AGSPKPKVTWMKGI--KDITTSSRTMTETVNDYVR 137 (168)
Q Consensus 61 ~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~ 137 (168)
.+.|.|..++. .+... ....+..|+.+.|.|.+ .+.|.+.+.|++++ ..+...... ......
T Consensus 113 ~~~l~V~~~p~-------~~~~~----~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~----~~~~~~ 177 (214)
T 3jz7_A 113 KFLLTVLVKPS-------GTRCF----VDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLA----EMTSPV 177 (214)
T ss_dssp EEEEEEECCCB-------SCEEE----EESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGG----GTTSSE
T ss_pred EEEEEEEcCCC-------Cceee----eecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCcccee----ccCCCE
Confidence 88888864332 11111 12236789999999999 78999999999954 333221111 112238
Q ss_pred EEEccCCCCCCeeEEEEEEcCCceeeEEEEC
Q psy16859 138 LTLKRATDDENGTYFIVARNIYGSDRAFVTV 168 (168)
Q Consensus 138 l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~v 168 (168)
|.|.++..+|+|.|+|.|.|..|.....+.|
T Consensus 178 L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l 208 (214)
T 3jz7_A 178 ISVKNASSEYSGTYSCTVQNRVGSDQCMLRL 208 (214)
T ss_dssp EEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEEecCCHHHCEEEEEEEEcCCCcEEEEEEE
Confidence 9999999999999999999999998876643
No 60
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.92 E-value=3.2e-23 Score=136.59 Aligned_cols=151 Identities=17% Similarity=0.201 Sum_probs=111.8
Q ss_pred eEEEEE-CCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEE-cccceeeEEEEEEEEeccCCCcccCCCCeE
Q psy16859 5 EVIWLR-GNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVS-NEYGYTETFARVDVINVSSGAVKHEKPAMF 82 (168)
Q Consensus 5 ~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~-~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~ 82 (168)
.+.|++ ++..+ ....++..... + .|.|.+++.+|+|.|+|.+. +..+.....+.|.|.... ..+|.+
T Consensus 121 ~v~W~~~~~~~~-~~~~~~~~~~~--~--~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~------~~~p~i 189 (289)
T 3ejj_X 121 SVSLMREGGRQV-LRKTVYFFSPW--R--GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVH------PEPPQI 189 (289)
T ss_dssp SEEEEEGGGEEC-CTTCCEEEETT--T--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSC------CCCCEE
T ss_pred EEEEEecCCeec-CCCccEEECCC--C--CEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECC------CCCCeE
Confidence 499987 66666 34556655433 2 69999999999999999998 444555557788885322 145666
Q ss_pred EecCCcceEeecCCeEEEEEEEcc-CCCCeEEEeeCCEeccCCCCcEEEec--CCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 83 LTRPDTMMSVALGEDISFSFRLAG-SPKPKVTWMKGIKDITTSSRTMTETV--NDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~W~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
...+ ....+..|+.+.|.|.+.+ .|.+.+.|++++..+........... .....|.|.++..+|.|.|+|.|.|..
T Consensus 190 ~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 268 (289)
T 3ejj_X 190 KLEP-SKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDV 268 (289)
T ss_dssp EEES-SSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSS
T ss_pred EecC-CceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCC
Confidence 6666 4556678999999999998 78999999999987765322111001 113689999999999999999999999
Q ss_pred ceeeEEEE
Q psy16859 160 GSDRAFVT 167 (168)
Q Consensus 160 g~~~~~~~ 167 (168)
|.....+.
T Consensus 269 G~~~~s~~ 276 (289)
T 3ejj_X 269 GTRTATMN 276 (289)
T ss_dssp CEEEEEEE
T ss_pred CCccccEE
Confidence 99987764
No 61
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.92 E-value=1.4e-23 Score=145.20 Aligned_cols=149 Identities=17% Similarity=0.260 Sum_probs=104.7
Q ss_pred CCceEEEEECCEecCCCCCceEEE--ec---CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCccc
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYI--ED---SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKH 76 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~--~~---~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~ 76 (168)
|.|.|.|++++..+.. ...+... .. .....+|.|.+++.+|+|.|+|.+.|. ....+.|.|..
T Consensus 256 p~p~i~W~k~g~~l~~-~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~-------- 323 (423)
T 3qs7_E 256 HGFGLTWELENKALEE-GNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVE-------- 323 (423)
T ss_dssp SCCCEEEEESSSBCCG-GGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEES--------
T ss_pred CCcEEEEEECCEEccc-cceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEe--------
Confidence 6789999999988732 2122111 01 011347999999999999999999987 55567778753
Q ss_pred CCCCeEEecC-CcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 77 EKPAMFLTRP-DTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 77 ~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
++.+...+ ...+.+.+|+.+.|.|.+.|.|.|.+.|++++..+....... .....+.......+|+|.|+|.|
T Consensus 324 --~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~~~~~~~~~~D~G~YtC~A 397 (423)
T 3qs7_E 324 --KGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHA 397 (423)
T ss_dssp --SCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC----SSSSEEEEECCCTTCCSCEEEEE
T ss_pred --CCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccc----cCCcEEEEEecccccCEEEEEEE
Confidence 33344333 235667889999999999999999999999999886543100 01112222455678999999999
Q ss_pred EcCCceeeEEEEC
Q psy16859 156 RNIYGSDRAFVTV 168 (168)
Q Consensus 156 ~n~~g~~~~~~~v 168 (168)
.|..|..+..+.|
T Consensus 398 ~N~~G~~~~s~~L 410 (423)
T 3qs7_E 398 ENDDAQFTKMFTL 410 (423)
T ss_dssp EETTEEEEEEEEE
T ss_pred EcCCceEEEEEEE
Confidence 9999999877754
No 62
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.92 E-value=4.9e-25 Score=146.97 Aligned_cols=151 Identities=14% Similarity=0.273 Sum_probs=107.0
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCe
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAM 81 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~ 81 (168)
|.|.+.|++++..+. ...++.+. .+..+|.|.+++.+|+|.|+|.+.|..+.....+.|.|... +.
T Consensus 35 p~~~v~W~~~~~~~~-~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~----------~~ 100 (317)
T 2y25_A 35 KETHIVWYKDEREIS-VDEKHDFK---DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAF----------KE 100 (317)
T ss_dssp TTCEEEEEETTEEEC-CSCC--------CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTHHH----------HH
T ss_pred CCCEEEEEECCeEcC-CCCcEEEE---CCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEecC----------cc
Confidence 779999999999884 34455443 33368999999999999999999998887655554444211 11
Q ss_pred EEecCCcceEeecCCeEEEEEEEcc----------CCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeE
Q psy16859 82 FLTRPDTMMSVALGEDISFSFRLAG----------SPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTY 151 (168)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~~----------~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 151 (168)
+...+ ....+..|..+.|.|.+.+ .|.+.+.|++++..+....++..........|.|.++..+|.|.|
T Consensus 101 ~~~~~-~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 179 (317)
T 2y25_A 101 LMMEV-CKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKY 179 (317)
T ss_dssp HHHHH-HHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEE
T ss_pred ccccC-CceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeE
Confidence 11111 1222334455555554444 688999999999988877777766666667899999999999999
Q ss_pred EEEEEcCCceeeEEEE
Q psy16859 152 FIVARNIYGSDRAFVT 167 (168)
Q Consensus 152 ~C~~~n~~g~~~~~~~ 167 (168)
+|.+.|..|.....+.
T Consensus 180 ~C~a~n~~g~~~~~~~ 195 (317)
T 2y25_A 180 VMELFDGKTGHQKTVD 195 (317)
T ss_dssp EEEEECSSCEEEEEEE
T ss_pred EEEEEeCCceEEEEEE
Confidence 9999999998876654
No 63
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.91 E-value=2.8e-23 Score=147.19 Aligned_cols=157 Identities=19% Similarity=0.281 Sum_probs=115.9
Q ss_pred CCCce-EEEEECCEecC-CCCCceEEEec--CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCccc
Q psy16859 1 YVKPE-VIWLRGNTPLP-KSSPRFKYIED--SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKH 76 (168)
Q Consensus 1 ~p~p~-v~W~~~~~~~~-~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~ 76 (168)
+|.|. +.|++++..+. ....+..+... .....+|.|.+++.+|+|.|+|.+.|..|.....+.|.|..
T Consensus 238 ~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~-------- 309 (524)
T 2ec8_A 238 VSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVD-------- 309 (524)
T ss_dssp SSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEES--------
T ss_pred CCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEec--------
Confidence 46676 99999998731 11112211110 12246899999999999999999999999888888888853
Q ss_pred CCCCeEEecC--CcceEeecCCeEEEEEEEccCCCCe-EEEeeCCEeccCCCC-cEEEecC----CEEEEEEccCCCCCC
Q psy16859 77 EKPAMFLTRP--DTMMSVALGEDISFSFRLAGSPKPK-VTWMKGIKDITTSSR-TMTETVN----DYVRLTLKRATDDEN 148 (168)
Q Consensus 77 ~~~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~~~~~~~~~~~-~~~~~~~----~~~~l~i~~~~~~d~ 148 (168)
+|.+...+ .....+..|+.+.|.|.+.|.|.+. +.|++++..+..... +...... ....|.|.++..+|.
T Consensus 310 --~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 387 (524)
T 2ec8_A 310 --KGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEG 387 (524)
T ss_dssp --SCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGC
T ss_pred --cCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccC
Confidence 33443333 2367788999999999999999999 999999988765542 2211111 236899999999999
Q ss_pred eeEEEEEEcCCceeeEEEE
Q psy16859 149 GTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 149 g~y~C~~~n~~g~~~~~~~ 167 (168)
|.|+|.|.|..|.....+.
T Consensus 388 G~Y~C~a~N~~g~~~~~~~ 406 (524)
T 2ec8_A 388 GTYTFLVSNSDVNAAIAFN 406 (524)
T ss_dssp EEEEEEEECSSCEEEEEEE
T ss_pred eEEEEEEEecCceEEEEEE
Confidence 9999999999998876554
No 64
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.91 E-value=2.9e-23 Score=131.34 Aligned_cols=159 Identities=14% Similarity=0.158 Sum_probs=110.8
Q ss_pred CCCceEEEEEC--CEec-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc---eeeEEEEE
Q psy16859 1 YVKPEVIWLRG--NTPL-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG---YTETFARV 64 (168)
Q Consensus 1 ~p~p~v~W~~~--~~~~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~~l 64 (168)
.|.+.|.|+|. +... .....|+.+... .+..+|.|.+++.+|+|.|.|.+.+..+ .....+.|
T Consensus 27 ~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l 105 (213)
T 3mj8_L 27 LSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNS-GNMATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKV 105 (213)
T ss_dssp TTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEE
T ss_pred CCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEec-CCEEEEEECCCChhhCEEEEEEeccCCcceeEEcCceEE
Confidence 47889999992 2111 013357776655 6678999999999999999999998876 33445777
Q ss_pred EEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CC-CeEEEeeCCEeccCCCC--cEEEecCC---EEE
Q psy16859 65 DVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PK-PKVTWMKGIKDITTSSR--TMTETVND---YVR 137 (168)
Q Consensus 65 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~~~~~~~--~~~~~~~~---~~~ 137 (168)
.|...+ ..+|.+...+. ...+..|+.+.|.|.+.+. |+ +.+.|++++..+..... ........ ...
T Consensus 106 ~V~~~~------~~~P~i~~~~~-~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~ 178 (213)
T 3mj8_L 106 TVLGQP------NAAPSVTLFPP-SSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSY 178 (213)
T ss_dssp EEECSC------CBCCEEEEECC-CHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEE
T ss_pred EEeCCC------CCCCeEEccCC-CcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEE
Confidence 775432 13555555442 3334489999999999885 43 48999999988764211 00111111 246
Q ss_pred EEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 138 LTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 138 l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
|.|..+..+|.|.|+|.|.|..+.....+.
T Consensus 179 L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 179 LTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp EEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred EEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 889999999999999999999988877664
No 65
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.91 E-value=2.7e-25 Score=147.85 Aligned_cols=150 Identities=11% Similarity=0.071 Sum_probs=107.0
Q ss_pred CCCceEEEEECCEecCCCCCceEEEec--CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE--EEEEEEEeccCCCccc
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIED--SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET--FARVDVINVSSGAVKH 76 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~--~~~l~v~~~~~~~~~~ 76 (168)
+|.|++.|++++..+.... ..... ......|.|.++..+|+|.|+|.+.|..+.... .+.|.|.
T Consensus 142 ~P~~~i~W~~~~~~~~~~~---~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~--------- 209 (308)
T 4fom_A 142 KPVAHIDWEGDLGEMESTT---TSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQ--------- 209 (308)
T ss_dssp BSCCEEEECCCSSBCCEEE---EECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCC---------
T ss_pred cCCceEEEEECCccccccc---ceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEe---------
Confidence 5899999999998773110 00000 011246999999999999999999998765544 3444442
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCC-eEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKP-KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
.+|.+...+.....+..|+.+.|.|.+.|.|.| .+.|++++..+..... ..+...+.|.+++.+|+|.|+|.|
T Consensus 210 -~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~-----~~~~~~l~i~~v~~~d~G~Y~C~A 283 (308)
T 4fom_A 210 -YAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLL-----ASDNTLHFVHPLTFNYSGVYICKV 283 (308)
T ss_dssp -EEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCB-----CSTTEEECCSCCCSCCCSEEEEEE
T ss_pred -cCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEE-----EcCCeEEEECCCChhhCEEEEEEE
Confidence 234444444445567788999999999999988 6999998876654321 122345678889999999999999
Q ss_pred EcCCceeeEEEEC
Q psy16859 156 RNIYGSDRAFVTV 168 (168)
Q Consensus 156 ~n~~g~~~~~~~v 168 (168)
.|..|..+..+.|
T Consensus 284 ~N~~G~~~~~~~l 296 (308)
T 4fom_A 284 TNSLGQRSDQKVI 296 (308)
T ss_dssp EETTEEEEEEEEC
T ss_pred EeCCCcEEEEEEE
Confidence 9999998877654
No 66
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.91 E-value=6.8e-23 Score=140.72 Aligned_cols=156 Identities=22% Similarity=0.365 Sum_probs=113.7
Q ss_pred CCCceEEEEECCEecCCC--CCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee-EEEEEEEEeccCCCcccC
Q psy16859 1 YVKPEVIWLRGNTPLPKS--SPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE-TFARVDVINVSSGAVKHE 77 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~ 77 (168)
+|.|.+.|++++..+... ..+..... .+ +|.|.+++.+|+|.|+|.+.|..+... ....+.|...+.. .
T Consensus 148 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~~--~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~----~ 219 (403)
T 3laf_A 148 DPMPTIHWQKNQQDLNPIPGDSRVVVLP--SG--ALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGL----H 219 (403)
T ss_dssp SSCCEEEEEESSSBCCCCTTCCSEEECT--TS--CEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCC----C
T ss_pred cCCCeEEEEECCEeccccCCceEEEEcC--Cc--eEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCc----c
Confidence 478899999999887422 22332222 22 799999999999999999999876543 3567777543320 0
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.++.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+............ ..|.|.++..+|.|.|+|.+.|
T Consensus 220 ~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~n 296 (403)
T 3laf_A 220 RQLYFLQRP-SNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGG--SNLLISNVTDDDSGTYTCVVTY 296 (403)
T ss_dssp EEEEEEECC-CCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETT--TEEEECSCCGGGCEEEEEEEEE
T ss_pred cCceEecCC-CceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCc--cEEEEeCCCHHHCEEEEEEEEc
Confidence 111233334 5677889999999999999999999999999887654433322222 3799999999999999999999
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
..|.....+.
T Consensus 297 ~~g~~~~~~~ 306 (403)
T 3laf_A 297 KNENISASAE 306 (403)
T ss_dssp TTEEEEEEEE
T ss_pred CCCceEEEEE
Confidence 9988765543
No 67
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.91 E-value=1.4e-23 Score=148.75 Aligned_cols=149 Identities=17% Similarity=0.252 Sum_probs=109.4
Q ss_pred CCCceEEEEECCEecCCCCCceEEEe--c---CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcc
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIE--D---SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVK 75 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~--~---~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~ 75 (168)
.|.|+|.|++++..+.. ...+.... . .....+|.|.+++.+|+|.|+|.+.|. ....+.|.|..
T Consensus 255 ~p~p~i~W~k~g~~l~~-~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~------- 323 (527)
T 3qs9_E 255 NHGFGLTWELENKALEE-GNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVE------- 323 (527)
T ss_dssp SSCCCEEEECSSSCCCG-GGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--------
T ss_pred CCCeEEEEEECCEECCC-CceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEc-------
Confidence 48899999999987732 22222111 1 012346999999999999999999987 45566777732
Q ss_pred cCCCCeEEecC-CcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEE
Q psy16859 76 HEKPAMFLTRP-DTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIV 154 (168)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 154 (168)
+|.+...+ .....+.+|+.+.|.|.+.|.|.|.+.|++++..+....+.. .....|.|.++..+|+|.|+|.
T Consensus 324 ---~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~L~I~~v~~~D~G~YtC~ 396 (527)
T 3qs9_E 324 ---KGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL----DNGYSISKFCNHKHQPGEYIFH 396 (527)
T ss_dssp ----CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC----SSSSEEEEECCCTTCCSCEEEE
T ss_pred ---cCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccc----cCCcEEEEecCCcccCEEEEEE
Confidence 33333333 234567789999999999999999999999999886544321 1234789999999999999999
Q ss_pred EEcCCceeeEEEE
Q psy16859 155 ARNIYGSDRAFVT 167 (168)
Q Consensus 155 ~~n~~g~~~~~~~ 167 (168)
|.|..|.....+.
T Consensus 397 A~N~~g~~~~~~~ 409 (527)
T 3qs9_E 397 AENDDAQFTKMFT 409 (527)
T ss_dssp EEETTEEEEEEEE
T ss_pred EEeCCCcEEEEEE
Confidence 9999998876554
No 68
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.91 E-value=4.5e-24 Score=144.35 Aligned_cols=149 Identities=21% Similarity=0.282 Sum_probs=112.2
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCe-EEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAG-KYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
+|.|.+.|++++..+.....+. .. ....+|.|.+++.+|+| .|+|.+.|..|.....+.|.|.. +
T Consensus 185 ~p~p~i~W~~~~~~~~~~~~~~---~~-~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~----------~ 250 (347)
T 2ifg_A 185 RGLEQAGWILTELEQSATVMKS---GG-LPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSF----------P 250 (347)
T ss_dssp SSCCCCCEEESCCCSSEEECCC---CC-SSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBE----------E
T ss_pred CCCCEEEEEcCCceeecccccc---ee-cccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcC----------C
Confidence 4789999999987652211111 11 44568999999999999 99999999988877777777732 3
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEec-------CCEEEEEEccCCCCCCeeEE
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETV-------NDYVRLTLKRATDDENGTYF 152 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~-------~~~~~l~i~~~~~~d~g~y~ 152 (168)
|.+. ......|+.+.|.|.+.|.|.|.+.|++++..+........... ...++|.|.++..+|+|.|+
T Consensus 251 P~i~-----~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~ 325 (347)
T 2ifg_A 251 ASVQ-----LHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYT 325 (347)
T ss_dssp EEEE-----ECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEE
T ss_pred Ceee-----eccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEE
Confidence 3321 12245789999999999999999999999998875544332211 12468999999999999999
Q ss_pred EEEEcCCceeeEEEEC
Q psy16859 153 IVARNIYGSDRAFVTV 168 (168)
Q Consensus 153 C~~~n~~g~~~~~~~v 168 (168)
|.|.|..|.....+.|
T Consensus 326 C~a~N~~G~~~~~~~l 341 (347)
T 2ifg_A 326 LLAANPFGQASASIMA 341 (347)
T ss_dssp EEEEETTEEEEEEEEE
T ss_pred EEEecCCCceeeEEEE
Confidence 9999999998877653
No 69
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.91 E-value=2e-23 Score=130.58 Aligned_cols=146 Identities=14% Similarity=0.174 Sum_probs=103.4
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccce--eeEEEEEEEEeccCCCcccCCC
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGY--TETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
|.+.+.|+|++..+... +.. ........+|.|.+++.+|+|.|+|.+.|..+. ....+.|.|.... .+
T Consensus 31 ~~~~~~w~k~g~~~~~~--~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~-------~~ 100 (196)
T 3p2t_A 31 EAREYRLDKEESPAPWD--RQN-PLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMTGAY-------SK 100 (196)
T ss_dssp TCCEEEEEETTSCSCSE--EEC-CCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEECSS-------CC
T ss_pred CCCEEEEEECCCCCccc--ccc-cccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEecCCC-------CC
Confidence 56899999999877321 111 111134568999999999999999999998773 2335667775322 24
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcE-EEecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTM-TETVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|++++..+....... .........|.|.+++.+|+|.|+|.|.|.
T Consensus 101 p~~~~~~~--~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 177 (196)
T 3p2t_A 101 PTLSALPS--PLVTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHG 177 (196)
T ss_dssp CEEEEESC--SEECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECG
T ss_pred CEEEeCCc--ceecCCCeEEEEEecCC-CCCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcC
Confidence 55555553 25789999999999987 446899999987664332111 112223468999999999999999999998
Q ss_pred Cc
Q psy16859 159 YG 160 (168)
Q Consensus 159 ~g 160 (168)
.+
T Consensus 178 ~~ 179 (196)
T 3p2t_A 178 FS 179 (196)
T ss_dssp GG
T ss_pred CC
Confidence 76
No 70
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.91 E-value=1.9e-23 Score=154.75 Aligned_cols=149 Identities=23% Similarity=0.338 Sum_probs=115.9
Q ss_pred CceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeE
Q psy16859 3 KPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMF 82 (168)
Q Consensus 3 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~ 82 (168)
++++.|++++..+. ...++...........|.|.+++.+|+|.|+|.+.|..|.....+.|.|.. +|.+
T Consensus 649 ~~~i~W~~~g~~l~-~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~----------~P~~ 717 (816)
T 3dmk_A 649 PLNIDWTLDGQAIS-EDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYV----------PPRW 717 (816)
T ss_dssp CCEEEEEETTBCCC-GGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEE----------EEEE
T ss_pred CCEEEEEECCeEcC-CCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEe----------CCce
Confidence 34999999999884 333444333225567899999999999999999999999888888888853 4556
Q ss_pred EecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCC-------CCcEEEecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 83 LTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTS-------SRTMTETVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~-------~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
...+ ....+..|+.+.|.|.+.|.|.|.+.|++++..+... .... ... ++|.|.++..+|+|.|+|.|
T Consensus 718 ~~~~-~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~--~~~--~~L~i~~v~~~d~G~Y~C~a 792 (816)
T 3dmk_A 718 ILEP-TDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIR--VEE--GTLHVDNIQKTNEGYYLCEA 792 (816)
T ss_dssp EECC-CCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEE--EET--TEEEECSCCGGGCEEEEEEE
T ss_pred eeec-ccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEE--ecC--CEEEECcCChhhCeEEEEEE
Confidence 6666 4677889999999999999999999999976543321 1111 111 37999999999999999999
Q ss_pred EcCCceeeEEEE
Q psy16859 156 RNIYGSDRAFVT 167 (168)
Q Consensus 156 ~n~~g~~~~~~~ 167 (168)
.|..|.....+.
T Consensus 793 ~N~~G~~~~~v~ 804 (816)
T 3dmk_A 793 INGIGSGLSAVI 804 (816)
T ss_dssp ECSSSSCEEEEE
T ss_pred EeCCCCCcEEEE
Confidence 999999987764
No 71
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.91 E-value=1.4e-23 Score=131.46 Aligned_cols=144 Identities=12% Similarity=0.088 Sum_probs=94.9
Q ss_pred ceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccc-ce--eeEEEEEEEEeccCCCcccCCCC
Q psy16859 4 PEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEY-GY--TETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 4 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-~~--~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+.+.|+|++..+............ . ..|.|.+++.+|+|.|+|.+.|.. +. ....+.|.|.... .+|
T Consensus 33 ~~~~W~k~g~~~~~~~~~~~~~~~-~--~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~-------~~p 102 (198)
T 1ugn_A 33 QEYRLYREKKTAPWITRIPQELVK-K--GQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAY-------IKP 102 (198)
T ss_dssp CCEEEEESSSCCHHHHTSCHHHHT-T--TEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEECSS-------CCC
T ss_pred cEEEEEECCccccccccccccCCc-c--cEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEcccc-------cCC
Confidence 479999999876311101000111 2 379999999999999999999876 52 2345677775421 234
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCC-cEE-EecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSR-TMT-ETVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~-~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
.+...+ ...+.+|+.++|.|.+.+. .+.+.|++++..+..... ... ........|.|.++..+|.|.|+|.|.|.
T Consensus 103 ~i~~~~--~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 179 (198)
T 1ugn_A 103 TLSAQP--SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDS 179 (198)
T ss_dssp EEEEES--CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECT
T ss_pred ccccCC--ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeC
Confidence 444444 2568899999999999887 789999999886643211 111 11123468999999999999999999998
Q ss_pred Cc
Q psy16859 159 YG 160 (168)
Q Consensus 159 ~g 160 (168)
.+
T Consensus 180 ~~ 181 (198)
T 1ugn_A 180 NS 181 (198)
T ss_dssp TS
T ss_pred CC
Confidence 65
No 72
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.91 E-value=6.2e-23 Score=130.21 Aligned_cols=158 Identities=15% Similarity=0.147 Sum_probs=105.1
Q ss_pred CCceEEEEECC---E--------------ecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc-----eee
Q psy16859 2 VKPEVIWLRGN---T--------------PLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG-----YTE 59 (168)
Q Consensus 2 p~p~v~W~~~~---~--------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-----~~~ 59 (168)
|.+.|.|||.. . .......|+.+... .+..+|.|.+++.+|+|.|.|.+.+..+ ...
T Consensus 29 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~ 107 (218)
T 3s96_B 29 STYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSS-GADRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFG 107 (218)
T ss_dssp TTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEEEEEETTEEEEEEC
T ss_pred CCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecC-CceEEEEEccCCcccCEEEEEEEecCCCCceeEEEc
Confidence 67899999932 1 00012247766654 6678899999999999999999998765 223
Q ss_pred EEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcE--EEecCC-
Q psy16859 60 TFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTM--TETVND- 134 (168)
Q Consensus 60 ~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~--~~~~~~- 134 (168)
....|.|...+. .+|.+...+. ......|+.+.|.|.+.+ .|.+ .+.|++++..+....... ......
T Consensus 108 ~~~~l~V~~~~~------~~P~~~~~~~-~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~ 180 (218)
T 3s96_B 108 GGTKVTVLGQPK------STPTLTVFPP-SSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKF 180 (218)
T ss_dssp CCEEEEEESCCC------BCCEEEEECC-CHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC--------------CE
T ss_pred CcEEEEEecCCC------CCceEEeeCC-CcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCceecCcccccCCcE
Confidence 356777754321 3445544332 233456789999999988 5666 899999998876522111 011111
Q ss_pred --EEEEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 135 --YVRLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 135 --~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
...|.|.....+|.|.|+|.|.|..+.....+.
T Consensus 181 ~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 215 (218)
T 3s96_B 181 MASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSLS 215 (218)
T ss_dssp EEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEEC
T ss_pred EEEEEEEEeHHHccCCCeEEEEEEeCCCccccccc
Confidence 134778888888999999999999998887764
No 73
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.91 E-value=9.1e-23 Score=136.83 Aligned_cols=145 Identities=13% Similarity=0.078 Sum_probs=108.0
Q ss_pred CCCceEEEEECCE--ecC----CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCc
Q psy16859 1 YVKPEVIWLRGNT--PLP----KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAV 74 (168)
Q Consensus 1 ~p~p~v~W~~~~~--~~~----~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~ 74 (168)
+|.|.+.|++++. ... .....+.+ ...|.|.+++.+|+|.|+|.+.|..+.....+.|.|..
T Consensus 163 ~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~------~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~------ 230 (331)
T 3u83_A 163 KPPSVVSWETRLKGEAEYQEIRNPNGTVTV------ISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQY------ 230 (331)
T ss_dssp BSCCEEEEEESSCCEEEEEEEECTTSCEEE------EEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEE------
T ss_pred cCCceEEEEcCCCCccccceeECCCCcEEE------EEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEec------
Confidence 5889999999532 210 11112211 13699999999999999999999988877777888753
Q ss_pred ccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCe-EEEeeCCEeccCCCCcEEEecCCEEEEEEc-cCCCCCCeeEE
Q psy16859 75 KHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPK-VTWMKGIKDITTSSRTMTETVNDYVRLTLK-RATDDENGTYF 152 (168)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~d~g~y~ 152 (168)
+|.+...+.....+..|+.+.|.|.+.+.|.+. +.|++++..+.... . . .. .+|.|. ++..+|.|.|+
T Consensus 231 ----~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~--~-~-~~--~~L~i~~~v~~~d~G~Y~ 300 (331)
T 3u83_A 231 ----EPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGV--E-A-QN--RTLFFKGPINYSLAGTYI 300 (331)
T ss_dssp ----EEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE--E-E-ET--TEEEECSCCCGGGCEEEE
T ss_pred ----CCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccc--e-e-cC--cEEEEeCCCccccCeEEE
Confidence 333443343455678899999999999999998 99999988765431 1 1 12 379999 89999999999
Q ss_pred EEEEcCCceeeEEEE
Q psy16859 153 IVARNIYGSDRAFVT 167 (168)
Q Consensus 153 C~~~n~~g~~~~~~~ 167 (168)
|.|.|..|.....+.
T Consensus 301 C~a~N~~G~~~~~~~ 315 (331)
T 3u83_A 301 CEATNPIGTRSGQVE 315 (331)
T ss_dssp EEEEETTEEEEEEEE
T ss_pred EEEEeccccceEEEE
Confidence 999999999876664
No 74
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.91 E-value=4e-24 Score=132.85 Aligned_cols=139 Identities=14% Similarity=0.245 Sum_probs=95.3
Q ss_pred CceEEEEECCEecCCCCCceEEEecCCCEEEEEEcC-CCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcc------
Q psy16859 3 KPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSG-VTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVK------ 75 (168)
Q Consensus 3 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~------ 75 (168)
++.|.|+|++..+.... ++ +|.|.+ ++.+|+|.|+|.+.|..|.....+.+.|.........
T Consensus 26 ~~~i~W~k~g~~l~~~~---------~~--~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~~~~~~~~~~~ 94 (186)
T 1jbj_A 26 DENLKWEKNGQELPQKH---------DK--HLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAAKKDD 94 (186)
T ss_dssp CTTCEEEETTEEECSCC---------CS--EEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCCCCCCCCCCCCC
T ss_pred CCceEEEECCEECCCCC---------CC--EEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEecccccccccccccc
Confidence 34599999999984321 22 799999 9999999999999998887555555544322110000
Q ss_pred --cCCCCeEE---ecCCcc---eEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCC
Q psy16859 76 --HEKPAMFL---TRPDTM---MSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDE 147 (168)
Q Consensus 76 --~~~~~~~~---~~~~~~---~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 147 (168)
...++.+. ...... ..+..|+.+.|.|.+ |.|.+.|++++..+..... ....|.|.++..+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~-------~~~~L~i~~v~~~D 164 (186)
T 1jbj_A 95 AKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA-------TKNTWNLGNNAKDP 164 (186)
T ss_dssp CSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC-------CSSCCEEEETTSCC
T ss_pred cccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC-------CcceEEECCCCcCc
Confidence 00000000 000001 123489999999988 7889999999998764332 22468999999999
Q ss_pred CeeEEEEEEcCCcee
Q psy16859 148 NGTYFIVARNIYGSD 162 (168)
Q Consensus 148 ~g~y~C~~~n~~g~~ 162 (168)
+|.|+|.|.|..|..
T Consensus 165 ~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 165 RGTYQCQGAKETSNP 179 (186)
T ss_dssp EEEEEEEESSCEEEE
T ss_pred CEEEEEEEEcCcCCc
Confidence 999999999999876
No 75
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.90 E-value=2.4e-23 Score=129.01 Aligned_cols=138 Identities=13% Similarity=0.165 Sum_probs=99.7
Q ss_pred CCCceEEEEECCEe--cC-----------CCCCceEEEec--CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEE
Q psy16859 1 YVKPEVIWLRGNTP--LP-----------KSSPRFKYIED--SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVD 65 (168)
Q Consensus 1 ~p~p~v~W~~~~~~--~~-----------~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 65 (168)
.|.+.+.|++++.. +. ....|+..... ..+..+|.|.+++.+|+|.|+|.+.+..+ .+.|.
T Consensus 22 ~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~----~~~l~ 97 (184)
T 2ny1_B 22 KKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKE----EVQLL 97 (184)
T ss_dssp SSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEEEEETTEEE----EEEEE
T ss_pred CCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEEEEEEcCCC----cEEEE
Confidence 37789999998852 21 01223333221 13345799999999999999999988754 34556
Q ss_pred EEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCC
Q psy16859 66 VINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATD 145 (168)
Q Consensus 66 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 145 (168)
|.. +...+ ...+..|+.+.|.|.+.+.|.+.+.|++++..+. . ....|.|.++..
T Consensus 98 V~~-------------~~~~~--~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~--------~--~~~~L~i~~v~~ 152 (184)
T 2ny1_B 98 VFG-------------LTANS--DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI--------Q--GGKTLSVSQLEL 152 (184)
T ss_dssp EEE-------------EEESS--CSEEETTCCEEEEEECCTTCCCEEEEECTTSCEE--------E--ESSEEEESSCCG
T ss_pred EEE-------------ecCCC--CceeecCCCEEEEEEcCCCCCCEEEEEeCCCccc--------c--CceEEEEecCCc
Confidence 632 11222 3467899999999999999999999998765431 1 123799999999
Q ss_pred CCCeeEEEEEEcCCceeeEEEE
Q psy16859 146 DENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 146 ~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
+|+|.|+|.|.|..+.....+.
T Consensus 153 ~d~G~Y~C~a~n~~~~~~~~~~ 174 (184)
T 2ny1_B 153 QDSGTWTCTVLQNQKKVEFKID 174 (184)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE
T ss_pred CCCeEEEEEEEECCceEEEEEE
Confidence 9999999999999988876654
No 76
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.90 E-value=7.9e-23 Score=128.72 Aligned_cols=124 Identities=15% Similarity=0.244 Sum_probs=93.5
Q ss_pred CCce-EEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 2 VKPE-VIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 2 p~p~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
|.|. +.|++++..+.... .+|.|.+++.+|+|.|+|.+.|. .....+.|.|.. ++
T Consensus 35 p~~~~v~W~k~g~~l~~~~------------~~L~i~~v~~~D~G~Y~C~a~n~--~~s~~~~l~V~~----------~p 90 (204)
T 3sgj_C 35 PEDQSTQWFHNESLISSQA------------SSYFIDAATVDDSGEYRCQTQLS--TLSDPVQLEVHI----------GW 90 (204)
T ss_dssp SSCCCEEEEETTEEESCCS------------SEEEESSCCGGGCEEEEEEETTS--BCCCCEEEEEEC----------SS
T ss_pred CCCcEEEEEECCEEcccCc------------cEEEEecccccCCEEEEEEeCCC--cccccEEEEEec----------Cc
Confidence 5555 99999999884321 27999999999999999999874 333356677742 33
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccC-CCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGS-PKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
.+...+. ..+.+|+.+.|.|.+.+. |.+.+.|++++..+... .....|.|.++..+|+|.|+|.|.|..
T Consensus 91 ~~~~~~~--~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~--------~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 160 (204)
T 3sgj_C 91 LLLQAPR--WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYF--------HHNSDFYIPKATLKDSGSYFCRGLVGS 160 (204)
T ss_dssp EEEECSC--SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEE--------EECCCEEESSCCGGGCEEEEEEEEETT
T ss_pred eEecCCc--eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecc--------cCCceEEECcCCcccCEEEEEEEEeCC
Confidence 4444443 567899999999999765 56789999999875321 112369999999999999999999943
No 77
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.90 E-value=3.5e-22 Score=127.51 Aligned_cols=126 Identities=16% Similarity=0.193 Sum_probs=84.1
Q ss_pred CCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-C
Q psy16859 29 NNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-S 107 (168)
Q Consensus 29 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~ 107 (168)
.+..+|.|.+++.+|+|.|+|.+.|..+.....+.+.+.... ...+ ....+..|..+.|.|.+.+ .
T Consensus 80 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~------------~~~~-~~~~~~~g~~v~l~c~~~g~~ 146 (226)
T 4f80_A 80 AGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALG------------SDLH-VDVKGYKDGGIHLECRSTGWY 146 (226)
T ss_dssp GTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCC------------CCCE-EEEEEEETTEEEEEEEEEEEB
T ss_pred CCeEEEEEeeCchHHCeeEEEEEECCCcEEEEEEEEeeccce------------eccc-ceeeeccCCceeeEEEeccCC
Confidence 456789999999999999999999987776655555543211 1111 3455778999999999987 5
Q ss_pred CCCeEEEeeCC-EeccCCCCcEEEecC-CEEEEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 108 PKPKVTWMKGI-KDITTSSRTMTETVN-DYVRLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 108 p~~~~~W~~~~-~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
|.|.+.|++++ ..+............ ....+.+..++.+|.|.|+|.|.|..|..+..+.
T Consensus 147 P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~ 208 (226)
T 4f80_A 147 PQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTAS 208 (226)
T ss_dssp SCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEE
Confidence 99999999854 433332222222222 2234445567789999999999999998775543
No 78
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.90 E-value=5.9e-23 Score=128.52 Aligned_cols=144 Identities=13% Similarity=0.080 Sum_probs=90.9
Q ss_pred ceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee--EEEEEEEEeccCCCcccCCCCe
Q psy16859 4 PEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE--TFARVDVINVSSGAVKHEKPAM 81 (168)
Q Consensus 4 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~ 81 (168)
+.+.|+|++..+.... ...........|.|.+++.+|+|.|+|.+.|..+... ..+.|.|.... .+|.
T Consensus 33 ~~~~W~k~g~~~~~~~---~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~-------~~p~ 102 (196)
T 2d3v_A 33 QEYRLVKEGSPEPWDT---QNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTGFY-------NKPT 102 (196)
T ss_dssp CEEEEEETTCSSCSEE---ECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEECSS-------CCCE
T ss_pred cEEEEEECCCCCCccc---ccccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEecCCC-------CCCe
Confidence 4899999998763211 0000114456899999999999999999988766432 35667775421 2444
Q ss_pred EEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEe--cCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 82 FLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTET--VNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
+...+ ...+.+|+.++|.|.+.+.| +.+.|++++..+.......... ......|.|.+++.+|+|.|+|.|.|..
T Consensus 103 i~~~~--~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 179 (196)
T 2d3v_A 103 LSALP--SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRH 179 (196)
T ss_dssp EEC-------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETT
T ss_pred EEccC--CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccC
Confidence 44433 24678999999999999988 8999999987664221110011 1123689999999999999999999976
Q ss_pred c
Q psy16859 160 G 160 (168)
Q Consensus 160 g 160 (168)
+
T Consensus 180 ~ 180 (196)
T 2d3v_A 180 I 180 (196)
T ss_dssp E
T ss_pred C
Confidence 5
No 79
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.90 E-value=1.4e-22 Score=138.66 Aligned_cols=154 Identities=18% Similarity=0.240 Sum_probs=104.4
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE---EEEEEEEeccCCCcccCC
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET---FARVDVINVSSGAVKHEK 78 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~---~~~l~v~~~~~~~~~~~~ 78 (168)
|.+.+.|++++.++... .+...... .+ .|.|.+++.+|+|.|+|.+.|..+.... ...+.+..... ....
T Consensus 131 ~~~~~~W~~~~~~~~~~-~~~~~~~~-~~--~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~---~~~~ 203 (384)
T 3kld_A 131 GELSYAWIFNEYPSYQD-NRRFVSQE-TG--NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGV---MGEY 203 (384)
T ss_dssp SCEEEEEEETTEECCCS-SSEEECTT-TC--CEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEE---CCCE
T ss_pred CCeEEEEEECCCCCEee-ccEEEEcC-CC--cEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCc---cccc
Confidence 56899999999887433 33222222 33 6999999999999999999998664322 12233221000 0011
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeC-CEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKG-IKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
+|.+.........+..|+.+.|.|.+.|.|.|.+.|+++ +..+.... . .......|.|.++..+|+|.|+|.|.|
T Consensus 204 ~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N 279 (384)
T 3kld_A 204 EPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKA--R--RHKSNGILEIPNFQQEDAGSYECVAEN 279 (384)
T ss_dssp EEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTC--E--ECTTSCEEEECSCCGGGCEEEEEEEEE
T ss_pred CCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccc--e--ecCCCcEEEECCCChhhCEEEEEEEEc
Confidence 233333333567788999999999999999999999984 44443321 1 112235799999999999999999999
Q ss_pred CCceeeEEE
Q psy16859 158 IYGSDRAFV 166 (168)
Q Consensus 158 ~~g~~~~~~ 166 (168)
..|......
T Consensus 280 ~~G~~~~~~ 288 (384)
T 3kld_A 280 SRGKNVAKG 288 (384)
T ss_dssp TTEEEEEEE
T ss_pred CCCeEEEEE
Confidence 999876443
No 80
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.90 E-value=5.1e-23 Score=130.83 Aligned_cols=142 Identities=13% Similarity=0.061 Sum_probs=99.1
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEE--EEEEcCCCCCCCeEEEEEEEcccceee--EEEEEEEEeccCCCcccC
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLH--TLILSGVTAEEAGKYTCRVSNEYGYTE--TFARVDVINVSSGAVKHE 77 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~l~v~~~~~~~~~~~ 77 (168)
|.+.+.|+|++..+.....+. ... .... .|.|.+++.+|+|.|+|.+.|..+... ..+.|.|... .
T Consensus 35 ~~~~~~W~k~g~~~~~~~~~~--~~~-~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~-------~ 104 (218)
T 1uct_A 35 EAYLTQLMIIKNSTYREIGRR--LKF-WNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGL-------Y 104 (218)
T ss_dssp TCSEEEEEEEETTEEEECSEE--CC-----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEEEECS-------S
T ss_pred CCCEEEEEECCCccccccccc--CCC-CcceeeEEEEcccccccCEEEEEEEEcCCCceeecCCEEEEEcCc-------c
Confidence 567999999987652111111 001 1223 799999999999999999998765332 2466666432 1
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.+|.+...+ ...+.+|+.++|.|...+.|.+.+.|++++..+... .........|.|.+++.+|+|.|+|.|.|
T Consensus 105 ~~P~i~~~p--~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~----~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 178 (218)
T 1uct_A 105 GKPFLSADR--GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ----HQSGEHPANFSLGPVDLNVSGIYRCYGWY 178 (218)
T ss_dssp CCCEEEESS--CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS----EEECSSSEEEECCSCCGGGCEEEEEEEEC
T ss_pred cCCEEEeCC--CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc----ccCCCccCEEEEccCCcccCEEEEEEEEc
Confidence 245555545 346789999999997777788899999998766541 11233456899999999999999999998
Q ss_pred CC
Q psy16859 158 IY 159 (168)
Q Consensus 158 ~~ 159 (168)
..
T Consensus 179 ~~ 180 (218)
T 1uct_A 179 NR 180 (218)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 81
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.90 E-value=3.6e-23 Score=130.90 Aligned_cols=153 Identities=17% Similarity=0.219 Sum_probs=104.5
Q ss_pred CCCceEEEEECC--Eec-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEE
Q psy16859 1 YVKPEVIWLRGN--TPL-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDV 66 (168)
Q Consensus 1 ~p~p~v~W~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v 66 (168)
.|.|.|.||+++ ..+ .....|+..... .+..+|.|.+++.+|+|.|.|.+.+..+.... ...|.|
T Consensus 28 ~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3d9a_L 28 SIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGS-GTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEI 106 (213)
T ss_dssp CCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred CCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcC-CCEEEEEECCCChhhCEEEEEeeecCCcceeCCCEEEEE
Confidence 367899999853 211 112357776655 66779999999999999999999987665433 346677
Q ss_pred EeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcEE--EecC-----CEEE
Q psy16859 67 INVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTMT--ETVN-----DYVR 137 (168)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~~--~~~~-----~~~~ 137 (168)
... ..+|.+...+.. .....|..+.|.|.+.+ .|.+ .+.|++++..+........ .... ..+.
T Consensus 107 ~~~-------~~~p~v~~~~~~-~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~ 178 (213)
T 3d9a_L 107 KRA-------DAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSST 178 (213)
T ss_dssp CCC-------CBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEE
T ss_pred ecC-------CCCceeEeECCC-hhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEE
Confidence 332 124454443322 22347889999999987 5665 8999999988765411000 0001 1248
Q ss_pred EEEccCCCCCCeeEEEEEEcCCcee
Q psy16859 138 LTLKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 138 l~i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
|.|.++..+|.|.|+|.|.|.....
T Consensus 179 L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 179 LTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp EEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred EEEeccccCCCCEEEEEEEEccCCC
Confidence 9999999999999999999987664
No 82
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.90 E-value=1.2e-21 Score=126.62 Aligned_cols=140 Identities=20% Similarity=0.285 Sum_probs=94.7
Q ss_pred CCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccce--eeEEEEEEEEeccCCC----c-ccCCCCeEEecCCcce
Q psy16859 19 SPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGY--TETFARVDVINVSSGA----V-KHEKPAMFLTRPDTMM 90 (168)
Q Consensus 19 ~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~~~~~----~-~~~~~~~~~~~~~~~~ 90 (168)
..|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+. ......|.|...+... . ....++.+...+ ..+
T Consensus 67 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 145 (247)
T 2ghw_B 67 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSP-ATL 145 (247)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEEC-SEE
T ss_pred cCcEEEEEeCCCCEEEEEECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccC-CEE
Confidence 357776653 255778999999999999999999987322 2224567774321000 0 001233344444 466
Q ss_pred EeecCCeEEEEEEEccCCCCeEEEee--CCEecc------------CCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 91 SVALGEDISFSFRLAGSPKPKVTWMK--GIKDIT------------TSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 91 ~~~~g~~~~l~C~~~~~p~~~~~W~~--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
.+.+|+.++|.|.+.+.|.+.+.|++ ++..+. ...++.........+|.|.+++.+|+|.|+|.|.
T Consensus 146 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 225 (247)
T 2ghw_B 146 SLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQR 225 (247)
T ss_dssp EECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEEC
T ss_pred EecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEc
Confidence 78899999999999999988999998 444321 1233433333445789999999999999999999
Q ss_pred cCC
Q psy16859 157 NIY 159 (168)
Q Consensus 157 n~~ 159 (168)
|..
T Consensus 226 ~~~ 228 (247)
T 2ghw_B 226 SNW 228 (247)
T ss_dssp SSS
T ss_pred cCC
Confidence 854
No 83
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.90 E-value=4.3e-22 Score=124.93 Aligned_cols=152 Identities=10% Similarity=0.152 Sum_probs=100.5
Q ss_pred CCceEEEEECCEecCC-----------CCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee-----EEEEEE
Q psy16859 2 VKPEVIWLRGNTPLPK-----------SSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE-----TFARVD 65 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-----~~~~l~ 65 (168)
|.|.+.|++++..+.. ...|..+.. .+..+|.|.+++.+|+|.|.|.+.+..+... ..+.|.
T Consensus 26 ~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~--~~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~ 103 (201)
T 1dr9_A 26 AQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDI--TNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLS 103 (201)
T ss_dssp HHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEES--TTTTEEEECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEE
T ss_pred cccEEEEEeCCcEEEEEeCCceeecCcccceeEEcc--CCCcEEEEecccchhCeEEEEEEEcCCCCccccccccEEEEE
Confidence 5689999999987520 112333221 2234899999999999999999999765432 355666
Q ss_pred EEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEc-cCCCCeEEEeeCCEeccCCCCcEEEecC-C-EEEEEEcc
Q psy16859 66 VINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLA-GSPKPKVTWMKGIKDITTSSRTMTETVN-D-YVRLTLKR 142 (168)
Q Consensus 66 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~~~~~~~~~~~~~~~~~-~-~~~l~i~~ 142 (168)
|.... ..|.+.... ...|..+.|.|.+. +.|.|.+.|++++..+............ . .....+..
T Consensus 104 V~~~~-------~~p~~~~~~-----~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 171 (201)
T 1dr9_A 104 VKADF-------PTPSISDFE-----IPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLD 171 (201)
T ss_dssp EECCC-------CCCEEEEEE-----CSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEECTTTCCEEEEEEEE
T ss_pred EcCCC-------CCCceEecc-----CCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEecCCCcEEEEEEEEE
Confidence 64321 123222211 23588899999995 8999999999999877644322222111 1 12223344
Q ss_pred CCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 143 ATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 143 ~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
+..+|.|.|+|.|.|..|..+..++
T Consensus 172 v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 172 FNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp EETTSCEEEEEEEEETTCCEEEEEE
T ss_pred EEecCCCEEEEEEecCcceeeeEEe
Confidence 5568999999999999999887765
No 84
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.90 E-value=4.2e-22 Score=124.41 Aligned_cols=141 Identities=13% Similarity=0.188 Sum_probs=95.9
Q ss_pred CCceEEEEECCEecC---CCC--------------CceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEE
Q psy16859 2 VKPEVIWLRGNTPLP---KSS--------------PRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARV 64 (168)
Q Consensus 2 p~p~v~W~~~~~~~~---~~~--------------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 64 (168)
|.+.|.|++++..+. ... .|+.+. . ..+|+|.+++.+|+|.|.|.+.+..+.....+.|
T Consensus 27 ~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~-~---~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L 102 (193)
T 2if7_A 27 KVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT-Q---SYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTL 102 (193)
T ss_dssp CCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC-T---TCCEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred cccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC-C---CeEEEECCCCcccCceEEEEEEecCCCeEEEEEE
Confidence 346899999986542 110 133332 1 2479999999999999999999887776667778
Q ss_pred EEEeccCCCcccCCCCeEEecCCcceEeecCC-eEEEEEEEccC-CCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEcc
Q psy16859 65 DVINVSSGAVKHEKPAMFLTRPDTMMSVALGE-DISFSFRLAGS-PKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKR 142 (168)
Q Consensus 65 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~l~C~~~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 142 (168)
.|...+. .|.+...+ .....|. .+.|.|.+.+. |.+.+.|++++..+... . .|.|..
T Consensus 103 ~V~~~~~-------~p~i~~~~---~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~---------~--~l~i~~ 161 (193)
T 2if7_A 103 RILRQLR-------NIQVTNHS---QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQ---------P--NLTVSW 161 (193)
T ss_dssp EEECCCE-------EEEEEECC---C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESS---------S--EEEEEE
T ss_pred EEEccCC-------CCeEecCc---eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCC---------C--eEEEEe
Confidence 8854321 23333322 1233455 79999999984 57899999998765321 1 355544
Q ss_pred CCCC-CCeeEEEEEEcCCceeeEEEE
Q psy16859 143 ATDD-ENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 143 ~~~~-d~g~y~C~~~n~~g~~~~~~~ 167 (168)
...+ |.|.|+|.|.|..|..+..+.
T Consensus 162 ~~~~~d~G~Y~C~a~N~~g~~s~~~~ 187 (193)
T 2if7_A 162 DPRISSEQDYTCIAENAVSNLSFSVS 187 (193)
T ss_dssp CTTTCSCCEEEEEEEETTEEEEEEEE
T ss_pred ccCcCCCCcEEEEEECCCCccccccc
Confidence 3444 899999999999999887664
No 85
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.90 E-value=4e-23 Score=130.54 Aligned_cols=158 Identities=13% Similarity=0.130 Sum_probs=109.0
Q ss_pred CCceEEEEEC--CEecC-----------CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc--eeeEEEEEEE
Q psy16859 2 VKPEVIWLRG--NTPLP-----------KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG--YTETFARVDV 66 (168)
Q Consensus 2 p~p~v~W~~~--~~~~~-----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~~l~v 66 (168)
|.+.+.||++ +..+. ....|+..... .+..+|.|.+++.+|+|.|.|.+.+..+ .......|.|
T Consensus 26 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V 104 (211)
T 3tv3_L 26 SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKS-GNTASLTVSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTV 104 (211)
T ss_dssp CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEE-TTEEEEEEESCCGGGCEEEEEEEEETTTEEEECCCEEEEE
T ss_pred CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEcc-CCEEEEEECCCChhHCEEEEEEEecCCCceeECCCceEEE
Confidence 5789999994 22110 12357776655 6678999999999999999999999876 2334567777
Q ss_pred EeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC--CCCeEEEeeCCEeccCCCC--cEEEecCC----EEEE
Q psy16859 67 INVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS--PKPKVTWMKGIKDITTSSR--TMTETVND----YVRL 138 (168)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~--p~~~~~W~~~~~~~~~~~~--~~~~~~~~----~~~l 138 (168)
.... ..+|.+...+. ......|+.+.|.|.+.+. |.+.+.|++++..+..... ........ ...|
T Consensus 105 ~~~~------~~~P~v~~~~~-~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L 177 (211)
T 3tv3_L 105 LGQP------KAAPSVTLFPP-SSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYL 177 (211)
T ss_dssp CCSC------CBCCEEEEECC-CHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEE
T ss_pred eCCC------CcCCeeEecCC-chhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEE
Confidence 4221 13555555442 2334479999999999884 3578999999988754211 00111111 1468
Q ss_pred EEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 139 TLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 139 ~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
.|..+..+|.|.|+|.|.|..+.....+.
T Consensus 178 ~i~~~~~~d~g~Y~C~v~~~~~~~~~~~~ 206 (211)
T 3tv3_L 178 SLTPEQWKSHRSYSCQVTHEGSTVEKTVA 206 (211)
T ss_dssp EECHHHHHHSSCEEEEEEETTEEEEEEEC
T ss_pred EEcHHHhCCCCeEEEEEEECCCCEEeecc
Confidence 88888888999999999999988877664
No 86
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.90 E-value=2.6e-24 Score=144.53 Aligned_cols=158 Identities=20% Similarity=0.338 Sum_probs=63.8
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCc-------
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAV------- 74 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~------- 74 (168)
|.|.+.|++++..+. ...++.... .+|.|.+++.+|+|.|+|.+.|. +.....+.|.|...+....
T Consensus 37 p~~~v~W~k~g~~~~-~~~~~~~~~-----~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l~V~~~~~~~~~~~~~~~ 109 (334)
T 1ry7_B 37 PMGPTVWVKDGTGLV-PSERVLVGP-----QRLQVLNASHEDSGAYSCRQRLT-QRVLCHFSVRVTDAPSSGDDEDGEDE 109 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcceEEEECCeeCC-CcccEEecc-----ceEEEeecccccCEEEEEEEEeC-CeEEEEEEEEEeccCccccccccccc
Confidence 678999999999883 344554432 38999999999999999999988 6666667777754321000
Q ss_pred -----ccCCCCeEEecC---CcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcE-EEecCCEEEEEEccCCC
Q psy16859 75 -----KHEKPAMFLTRP---DTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTM-TETVNDYVRLTLKRATD 145 (168)
Q Consensus 75 -----~~~~~~~~~~~~---~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~ 145 (168)
....+|.+.... .....+..|+.+.|.|.+.+.|.+.+.|++++..+....+.. .........|.|.++..
T Consensus 110 ~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 189 (334)
T 1ry7_B 110 AEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVP 189 (334)
T ss_dssp ---------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCG
T ss_pred cccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCc
Confidence 000122222111 123567899999999999999999999999998776544321 11122335799999999
Q ss_pred CCCeeEEEEEEcCCceeeEEE
Q psy16859 146 DENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 146 ~d~g~y~C~~~n~~g~~~~~~ 166 (168)
+|+|.|+|.+.|..|.....+
T Consensus 190 ~d~G~Y~C~a~n~~g~~~~~~ 210 (334)
T 1ry7_B 190 SDRGNYTCVVENKFGSIRQTY 210 (334)
T ss_dssp GGCCCEEEEEEETTEEEEEEE
T ss_pred ccCEEEEEEEEeCCCCEEEEE
Confidence 999999999999998876554
No 87
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.89 E-value=2.8e-22 Score=135.49 Aligned_cols=145 Identities=19% Similarity=0.240 Sum_probs=104.3
Q ss_pred CCceEEEEECCE------ecC--CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCC
Q psy16859 2 VKPEVIWLRGNT------PLP--KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGA 73 (168)
Q Consensus 2 p~p~v~W~~~~~------~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~ 73 (168)
|.|.|.|++++. .+. ....++.... + +|.|.+++.+|+|.|+|.+.|..+.....+.|.|...+.
T Consensus 46 ~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~---~--~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~-- 118 (349)
T 4dep_C 46 AGLTLIWYWTRQDRDLEEPINFRLPENRISKEK---D--VLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDS-- 118 (349)
T ss_dssp TTCEEEEEEEESSCCCEEECCCCCGGGCEEEET---T--EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCT--
T ss_pred CCceEEEEECCCCCcccccccccccCceEeecC---C--EEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCc--
Confidence 359999999883 221 1122333332 2 799999999999999999999888887788888865332
Q ss_pred cccCCCCeEEecCCcceEeecCCeEEEEEEE-----ccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCC
Q psy16859 74 VKHEKPAMFLTRPDTMMSVALGEDISFSFRL-----AGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDEN 148 (168)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-----~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 148 (168)
..++. ...+ ....+..|+.+.|.|.+ .+.|.+.+.|++++..+.....+. ... ..|.|.++..+|+
T Consensus 119 ---~~~~~-~~~~-~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~--~~~--~~L~i~~v~~~d~ 189 (349)
T 4dep_C 119 ---CFNSP-MKLP-VHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVI--PEG--MNLSFLIALISNN 189 (349)
T ss_dssp ---TSCCS-CCCC-EEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEE--EET--TEEEEESCCGGGC
T ss_pred ---ccCcc-cccC-cceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCcccee--ecC--CEEEEeeeeecCC
Confidence 11111 1112 34567789999999985 678999999999999886543322 222 3699999999999
Q ss_pred eeEEEEEEcCC-cee
Q psy16859 149 GTYFIVARNIY-GSD 162 (168)
Q Consensus 149 g~y~C~~~n~~-g~~ 162 (168)
|.|+|.|.|.. |..
T Consensus 190 G~Y~C~a~n~~~g~~ 204 (349)
T 4dep_C 190 GNYTCVVTYPENGRT 204 (349)
T ss_dssp EEEEEEEEEEETTEE
T ss_pred cEEEEEEEEeeCCEE
Confidence 99999999986 543
No 88
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.89 E-value=7.9e-23 Score=137.64 Aligned_cols=145 Identities=13% Similarity=0.164 Sum_probs=107.3
Q ss_pred CCCceEEEEECCEecC--CC-CCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccC
Q psy16859 1 YVKPEVIWLRGNTPLP--KS-SPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHE 77 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~--~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~ 77 (168)
+|.|.+.|++++..+. .. ..++... ++ +|.|.+++.+|+|.|+|.+.|..+.....+.|.|...+.
T Consensus 52 ~p~~~v~W~k~~~~~~~~~~~~~~~~~~---~~--~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~------ 120 (339)
T 3o4o_C 52 SPRINLTWHKNDSARTVPGEEETRMWAQ---DG--ALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTD------ 120 (339)
T ss_dssp SSCCBCCCEESSCCSCCSCCSSSCEEEE---TT--EEEESSBCTTCCEEEECCEEETTEEEEEEEEEEEECSCG------
T ss_pred CCCceEEEEECCCCcccCccccccEEee---CC--eEEECCCCcccCEEEEEEEECCcceEEEEEEEEEEcCCC------
Confidence 3788999999998742 22 3344433 23 799999999999999999999888777788888864322
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEE-----EccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFR-----LAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYF 152 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~-----~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 152 (168)
.. ..... ....+..|+.+.|.|. +.+.|.+.+.|++++..+......... ......|.|.++..+|.|.|+
T Consensus 121 -~~-~~~~~-~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~ 196 (339)
T 3o4o_C 121 -AF-LPFIS-YPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLS-VRGTTHLLVHDVALEDAGYYR 196 (339)
T ss_dssp -GG-HHHHC-EEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEE-CTTSSEEEESSCCGGGCEEEE
T ss_pred -cc-ccccc-cceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEE-cCCcceEEEcccCHhhCeEEE
Confidence 00 00111 2346789999999999 788899999999999887654322222 222247999999999999999
Q ss_pred EEEEcCCc
Q psy16859 153 IVARNIYG 160 (168)
Q Consensus 153 C~~~n~~g 160 (168)
|.+.|..|
T Consensus 197 C~a~n~~g 204 (339)
T 3o4o_C 197 CVLTFAHE 204 (339)
T ss_dssp EEEECCBT
T ss_pred EEEEECCC
Confidence 99999887
No 89
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.89 E-value=4.6e-22 Score=131.20 Aligned_cols=144 Identities=19% Similarity=0.320 Sum_probs=105.1
Q ss_pred ceEEEEE-CCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee-EEEEEEEEeccCCCcccCCCCe
Q psy16859 4 PEVIWLR-GNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE-TFARVDVINVSSGAVKHEKPAM 81 (168)
Q Consensus 4 p~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~ 81 (168)
+.+.|++ ++..+ ....++.+... +...+|.|.+++.+|+|.|+|.+.+..+... ..+.|.|.. ++.
T Consensus 33 ~~v~W~~~~g~~~-~~~~~~~~~~~-~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~----------~~~ 100 (291)
T 2wim_A 33 ESIDWYNPQGEKI-ISTQRVVVQKE-GVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQ----------KLT 100 (291)
T ss_dssp SEEECBCTTCCBC-CCBTTEEEEEE-TTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEEC----------CCB
T ss_pred CceEEECCCCcCc-cCCCcEEEecC-CCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecC----------Ccc
Confidence 4899999 67666 44567777666 5667999999999999999999999877653 356666642 233
Q ss_pred EEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCce
Q psy16859 82 FLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+............ ...|.|.++...|.|.|+|.+.|..+.
T Consensus 101 ~~~~~-~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~L~i~~v~~~d~G~Y~C~~~n~~~~ 178 (291)
T 2wim_A 101 FREVV-SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA-NNNLQILNINKSDEGIYRCEGRVEARG 178 (291)
T ss_dssp CCSCC-CSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECT-TSCEEETTCCGGGCEEEEEEEEETTTT
T ss_pred eEeCC-CChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEcc-CCCEEEEecchhhCEEEEEEEEECCCC
Confidence 33333 4567889999999999999999999999988776543222211111 236999999999999999999998754
No 90
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.89 E-value=1.3e-21 Score=123.04 Aligned_cols=144 Identities=14% Similarity=0.152 Sum_probs=98.8
Q ss_pred CCCceEEEEECC-EecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 1 YVKPEVIWLRGN-TPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 1 ~p~p~v~W~~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
+|.|.+.|+++. .++ ..+.. .. +....|.|.+++.+|+|.|.|.+.|..+.....+.|.|..++
T Consensus 28 ~P~p~i~W~~~~~~~~---~~~~~--~~-~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~p--------- 92 (202)
T 1vca_A 28 CESPFFSWRTQIDSPL---NGKVT--NE-GTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFP--------- 92 (202)
T ss_dssp CSSCEEEEEETTCCCC---SSEEE--EE-TTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEBCC---------
T ss_pred CCCCeEEEECCCCCCc---cceEE--Ec-CCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEeCC---------
Confidence 588999999843 222 11221 22 334579999999999999999999988777777888886432
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCC---CeEEEeeCCEeccCCCCcEEE----ecCCEEEEEEccCCCCCCeeEE
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPK---PKVTWMKGIKDITTSSRTMTE----TVNDYVRLTLKRATDDENGTYF 152 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~~~W~~~~~~~~~~~~~~~~----~~~~~~~l~i~~~~~~d~g~y~ 152 (168)
......+. ..+.+|+.++|.|.+.+.++ +.+.|++++..+......... .......|.|.....+|.|.|+
T Consensus 93 ~~~~~~~~--~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~yt 170 (202)
T 1vca_A 93 KDPEIHLS--GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLV 170 (202)
T ss_dssp SCCEEEES--SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEE
T ss_pred CCCEeCCc--eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEE
Confidence 22222232 45789999999999987543 369999999876432100000 0011245678888888899999
Q ss_pred EEEEcCCce
Q psy16859 153 IVARNIYGS 161 (168)
Q Consensus 153 C~~~n~~g~ 161 (168)
|.|.|..|.
T Consensus 171 C~A~n~~~~ 179 (202)
T 1vca_A 171 CRAKLHIDE 179 (202)
T ss_dssp EEEEECSCC
T ss_pred EEEEccccC
Confidence 999998875
No 91
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.89 E-value=1.9e-22 Score=127.44 Aligned_cols=151 Identities=15% Similarity=0.171 Sum_probs=102.1
Q ss_pred CCceEEEEECC--Eec-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEE
Q psy16859 2 VKPEVIWLRGN--TPL-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVI 67 (168)
Q Consensus 2 p~p~v~W~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~ 67 (168)
|.|.|.||+++ ..+ .....|+..... .+..+|.|.+++.+|+|.|.|.+.+..+.... ...|.|.
T Consensus 28 ~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~ 106 (210)
T 1lk3_L 28 VTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGS-GTDFTLTIDPVEADDTAIYFCQQSWNGPLTFGAGTKLELK 106 (210)
T ss_dssp CTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred cCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEec-CCEEEEEECCCCHHHCeEEEEEEEcCCCceeCCCEEEEEc
Confidence 67899999942 211 112357776654 66779999999999999999999987654332 3466663
Q ss_pred eccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCCC-eEEEeeCCEeccCC-CC-cEEEe-cCC----EEEE
Q psy16859 68 NVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPKP-KVTWMKGIKDITTS-SR-TMTET-VND----YVRL 138 (168)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~-~~-~~~~~-~~~----~~~l 138 (168)
.. ..+|.+...+... ....|+.+.|.|.+.| .|.+ .+.|++++..+... .. ..... ... .+.|
T Consensus 107 ~~-------~~~P~v~~~~~~~-~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L 178 (210)
T 1lk3_L 107 RA-------DAAPTVSIFPPST-EQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTL 178 (210)
T ss_dssp CC-------CBCCEEEEECCCH-HHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEE
T ss_pred CC-------CcCCeEEEECCch-hhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEE
Confidence 22 1244454433222 2347999999999987 4544 89999999887654 10 00000 111 2478
Q ss_pred EEccCCCCCCeeEEEEEEcCCce
Q psy16859 139 TLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 139 ~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
.|..+..+|.|.|+|.|.|....
T Consensus 179 ~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 179 SLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp EEEHHHHHTCCEEEEEEECTTCS
T ss_pred EEChHHhccCCcEEEEEEecCCC
Confidence 99999999999999999998763
No 92
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.89 E-value=3.4e-22 Score=141.72 Aligned_cols=143 Identities=14% Similarity=0.113 Sum_probs=93.7
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|+|.|+|++..+.... +.. ....+|.|.+++.+|+|.|+|.+.|..|.....+.|.|. .+|
T Consensus 353 ~P~p~i~W~k~g~~l~~~~-~~~-----~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~----------~~P 416 (527)
T 3qs9_E 353 YPQIRCTWTFSRKSFPCEQ-KGL-----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR----------RKP 416 (527)
T ss_dssp ESCCEEEEEETTEEEECBC-CBC-----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC------------CCC
T ss_pred cCCCEEEEEECCEECcCCc-ccc-----cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEe----------cCC
Confidence 5899999999999884322 221 112379999999999999999999999988888888884 355
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCC-----------cEEEecCCEEEEEEccCCCCCCe
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSR-----------TMTETVNDYVRLTLKRATDDENG 149 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~-----------~~~~~~~~~~~l~i~~~~~~d~g 149 (168)
.+...+. ...|.|.+.|.|.|.+.|++++........ ...........+.+.....+|.|
T Consensus 417 ~i~~~~~---------~~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G 487 (527)
T 3qs9_E 417 QVLAEAS---------ASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGF 487 (527)
T ss_dssp EEEECCC---------CE---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCCSSCSC
T ss_pred eEEEeCC---------CCEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCE
Confidence 5544331 235799999999999999986543311000 00011111123333334456999
Q ss_pred eEEEEEEcCCceeeEEEEC
Q psy16859 150 TYFIVARNIYGSDRAFVTV 168 (168)
Q Consensus 150 ~y~C~~~n~~g~~~~~~~v 168 (168)
.|+|.|.|.+|.....+.|
T Consensus 488 ~Y~C~A~N~~G~~~~~~~L 506 (527)
T 3qs9_E 488 LVKCCAYNSLGTSCETILL 506 (527)
T ss_dssp EEEEEEECSSCEEEEEEEC
T ss_pred EEEEEEEeCCCCceeEEEE
Confidence 9999999999999887764
No 93
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.89 E-value=2.1e-21 Score=143.89 Aligned_cols=146 Identities=18% Similarity=0.309 Sum_probs=115.4
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|++.|++++..+... . ..|.|.+++.+|+|.|+|.+.|..+.......+.|... ..+|
T Consensus 370 ~p~~~v~W~k~g~~~~~~----------~--~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~-------~~~p 430 (816)
T 3dmk_A 370 NPIKTVSWMKDGKAIGHS----------E--SVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGR-------FDPP 430 (816)
T ss_dssp ECCCEEEEEETTEECSCC----------S--SEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCS-------SCCC
T ss_pred cCCCEEEEEECCEECCCC----------C--CEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccc-------cCCC
Confidence 378999999999988421 1 26999999999999999999998887776666666322 2456
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEe----c-CCEEEEEEccCCCCCCeeEEEEE
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTET----V-NDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~----~-~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+....++.... . .....|.|.++..+|.|.|+|.|
T Consensus 431 ~i~~~~-~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 509 (816)
T 3dmk_A 431 VIRQAF-QEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIA 509 (816)
T ss_dssp EEEEEC-CCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEE
T ss_pred ceEecC-cceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEE
Confidence 665555 45678899999999999999999999999999887665544321 1 12357999999999999999999
Q ss_pred EcCCceeeEEE
Q psy16859 156 RNIYGSDRAFV 166 (168)
Q Consensus 156 ~n~~g~~~~~~ 166 (168)
.|..|.....+
T Consensus 510 ~n~~g~~~~~~ 520 (816)
T 3dmk_A 510 KSKVGVAEHSA 520 (816)
T ss_dssp EETTEEEEEEE
T ss_pred EECCCeEEEEE
Confidence 99999876554
No 94
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.89 E-value=6.9e-22 Score=126.32 Aligned_cols=118 Identities=19% Similarity=0.314 Sum_probs=87.8
Q ss_pred EEEEcCCCCCCCeEEEEEEEccc-ceeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeE-EEEEEE-ccCCC
Q psy16859 33 TLILSGVTAEEAGKYTCRVSNEY-GYTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDI-SFSFRL-AGSPK 109 (168)
Q Consensus 33 ~l~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~C~~-~~~p~ 109 (168)
.|.|.+++.+|+|.|+|.+.+.. +.....+.|.|...+. .+.+...+ ....+..|..+ .|.|.+ .+.|.
T Consensus 78 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~-------~~~~~~~~-~~~~~~~g~~~~~l~C~~~~~~p~ 149 (231)
T 2pet_A 78 RLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPE-------ATEVSPNK-GTLSVMEDSAQEIATCNSRNGNPA 149 (231)
T ss_dssp CEEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCC-------CCEEEECC-SSCCTTCCSEEEEEEEEEEEEBSC
T ss_pred eEEEcccCcccCceEEEEEEecCCCceEEEEEEEEEecCC-------CcEEecCC-cceeecCCCceEEEEEEeECcccC
Confidence 49999999999999999999886 6666778888865432 34444444 45556688887 999999 88999
Q ss_pred CeEEEeeCCEeccCCC----CcEEEec-----CC----EEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 110 PKVTWMKGIKDITTSS----RTMTETV-----ND----YVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 110 ~~~~W~~~~~~~~~~~----~~~~~~~-----~~----~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
+.+.|++++..+.... +...... .. .+.|.+.....+|.|.|+|.|.|.
T Consensus 150 p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 150 PKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp CEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred CEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 9999999998877554 3222211 01 145777755666699999999993
No 95
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.89 E-value=4.2e-22 Score=131.45 Aligned_cols=152 Identities=14% Similarity=0.160 Sum_probs=108.3
Q ss_pred ceEEEEEC-CEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEEeccCCCcccCCCCe
Q psy16859 4 PEVIWLRG-NTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVINVSSGAVKHEKPAM 81 (168)
Q Consensus 4 p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~~~~~ 81 (168)
|.+.|+++ +..+ ....++..... + .|.|.+++.+|+|.|+|.+.+..+.... .+.|.|.... ..+|.
T Consensus 120 ~~v~W~~~~~~~~-~~~~~~~~~~~--~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~------~~~p~ 188 (292)
T 4dkd_C 120 AGVSLVRVRGRPL-MRHTNYSFSPW--H--GFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVI------PGPPA 188 (292)
T ss_dssp SSEEEEEGGGCCC-CSSCCEECCSS--S--CCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCC------CSSCE
T ss_pred eeEEEEecCCCcc-ccCCcccccCC--c--eEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCC------CCCCe
Confidence 78999997 4444 33444443322 2 4999999999999999999987765544 6778885422 12566
Q ss_pred EEecCCcceEeecCCeEEEEEEEccCCC-CeEEEeeCCEeccCCCCcEEEec--CCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 82 FLTRPDTMMSVALGEDISFSFRLAGSPK-PKVTWMKGIKDITTSSRTMTETV--NDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~~~W~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
+...+ ....+..|+.+.|.|.+.+.|. +.+.|++++..+........... .....|.|.++..+|.|.|+|.|.|.
T Consensus 189 i~~~~-~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 267 (292)
T 4dkd_C 189 LTLVP-AELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNV 267 (292)
T ss_dssp EEEES-SCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECS
T ss_pred EEccC-CceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecC
Confidence 66666 3455679999999999998664 56888888876544332111111 12258999999999999999999999
Q ss_pred CceeeEEEE
Q psy16859 159 YGSDRAFVT 167 (168)
Q Consensus 159 ~g~~~~~~~ 167 (168)
.|..+..+.
T Consensus 268 ~g~~~~~~~ 276 (292)
T 4dkd_C 268 QGKHSTSMF 276 (292)
T ss_dssp SCEEEEEEE
T ss_pred CCCceeEEE
Confidence 999886654
No 96
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.89 E-value=3.6e-22 Score=134.11 Aligned_cols=142 Identities=13% Similarity=0.173 Sum_probs=101.1
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCe-EEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAG-KYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
|.++|.|+|++..+... .+. ... + +|.|.+++.+|+| .|+|.+.|..|.......+.+.. .++
T Consensus 66 p~~~v~W~k~~~~~~~~-~~~-~~~---~--~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~---------~~p 129 (329)
T 3oq3_B 66 KDNVVNWEKIGKTRRPL-NRR-VKN---G--DLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIR---------KPP 129 (329)
T ss_dssp TTCEEEEEECSSSCEEC-STT-EET---T--EEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEEC---------CCC
T ss_pred CCCeeEEEECCCCcccc-Cce-eec---c--eEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEc---------CCC
Confidence 66899999999876432 232 222 2 7999999999999 99999999887644433333322 233
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCC-CCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcC-
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSP-KPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNI- 158 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~- 158 (168)
.+...+ ....+..|+.+.|.|.+.+.| .+.+.|++++..+.......... . ..|.|.++..+|+|.|+|.|.|.
T Consensus 130 ~~~~~~-~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~-~--~~L~I~~v~~~D~G~Y~C~a~n~~ 205 (329)
T 3oq3_B 130 SCIPET-YELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS-G--QNLIIHNPELEDSGRYDCYVHYDD 205 (329)
T ss_dssp SCEEEE-EETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE-T--TEEEECSCCGGGCEEEEEEEEECC
T ss_pred cEeccc-cceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC-C--CEEEEeecChhhCEEEEEEEEecc
Confidence 332222 223356799999999999999 89999999998885333222222 2 47999999999999999999987
Q ss_pred -Cceee
Q psy16859 159 -YGSDR 163 (168)
Q Consensus 159 -~g~~~ 163 (168)
.|...
T Consensus 206 ~~g~~~ 211 (329)
T 3oq3_B 206 VRIKND 211 (329)
T ss_dssp TTSSSC
T ss_pred cCCCce
Confidence 65443
No 97
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.89 E-value=7.3e-22 Score=125.54 Aligned_cols=152 Identities=16% Similarity=0.214 Sum_probs=98.3
Q ss_pred ceEEEEECCEecC--------------CCCCceEEEec--CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 4 PEVIWLRGNTPLP--------------KSSPRFKYIED--SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 4 p~v~W~~~~~~~~--------------~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
+.+.|++++..+. ....|..+... ..+..+|.|.+++.+|+|.|+|.+.+ .+.....+.|.|.
T Consensus 36 ~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~ 114 (222)
T 3sbw_C 36 LIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISY-GGADYKRITVKVN 114 (222)
T ss_dssp CEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGGGCEEEEEEEES-SSEEEEEEEEEEE
T ss_pred EEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccccCeEEEEEEEe-CCCceeEEEEEEE
Confidence 4899999763321 01234444322 24567899999999999999999998 5555667778886
Q ss_pred eccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeC-CEeccCCCCcEEEe--cCCEEEEEEccCC
Q psy16859 68 NVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKG-IKDITTSSRTMTET--VNDYVRLTLKRAT 144 (168)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~-~~~~~~~~~~~~~~--~~~~~~l~i~~~~ 144 (168)
.++. .+... ....+..|+.+.|.|.+.|.|.+.+.|+++ +..+.......... ........+..+.
T Consensus 115 ~~~~-------~~~~~----~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~ 183 (222)
T 3sbw_C 115 APYN-------KINQR----ILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRIN 183 (222)
T ss_dssp BCCC-------CCEEE----EEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEE
T ss_pred CCCC-------CCCce----eeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEe
Confidence 4322 11111 112466899999999999999999999997 55443322111111 1111222233445
Q ss_pred CCCCeeEEEEEEcCCceeeEEEE
Q psy16859 145 DDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 145 ~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
..|.|.|+|.|.|..|.....+.
T Consensus 184 ~~d~g~Y~C~a~n~~g~~~~~~~ 206 (222)
T 3sbw_C 184 TTTNEIFYCTFRRLDPEENHTAE 206 (222)
T ss_dssp CCTTCEEEEEEEETTTTEEEEEE
T ss_pred ccCCcEEEEEEEeCccceeeEEE
Confidence 78899999999999998775543
No 98
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.89 E-value=9.5e-22 Score=124.36 Aligned_cols=146 Identities=18% Similarity=0.170 Sum_probs=101.5
Q ss_pred CCceEEEEECC--E---ec--------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccce---eeEEEEEE
Q psy16859 2 VKPEVIWLRGN--T---PL--------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGY---TETFARVD 65 (168)
Q Consensus 2 p~p~v~W~~~~--~---~~--------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~ 65 (168)
|.|.|.|||+. . .+ .....|+..... .+..+|.|.+++.+|+|.|.|.+.+..+. ......|.
T Consensus 29 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~ 107 (213)
T 3nl4_L 29 ISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGS-GTDFTLTISDLECADAATYYCQSTYENPTYVSFGGGTEVG 107 (213)
T ss_dssp CTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEECSCCGGGCEEEEEEECCSSTTTCEECCCEEEE
T ss_pred CCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecC-CCEEEEEECCCChHHCEEEEEecCCCCceeEEeCCCeEEE
Confidence 67899999942 1 11 012457776655 67789999999999999999999987652 33345667
Q ss_pred EEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCCCeEEEeeCCEeccCCCCcEEE----ecC---CEEE
Q psy16859 66 VINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPKPKVTWMKGIKDITTSSRTMTE----TVN---DYVR 137 (168)
Q Consensus 66 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~W~~~~~~~~~~~~~~~~----~~~---~~~~ 137 (168)
|... ..+|.+...+. ...+..|+.+.|.|.+.+ .|.+.+.|++++..+......... ... ..+.
T Consensus 108 V~~~-------~~~p~v~~~~~-~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~ 179 (213)
T 3nl4_L 108 VKGD-------PVAPTVLIFPP-SADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSST 179 (213)
T ss_dssp EECC-------CBCCEEEEECC-CHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEE
T ss_pred EeCC-------CcCCeEEEeCC-chhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEE
Confidence 7542 23444444332 234557999999999998 899999999999877542100000 001 1246
Q ss_pred EEEccCCCCCCeeEEEEEE
Q psy16859 138 LTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 138 l~i~~~~~~d~g~y~C~~~ 156 (168)
|.|..+..+|.|.|+|.|.
T Consensus 180 L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 180 LTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEEEHHHHHTCCEEEEEEE
T ss_pred EEecHHHcCCCCeEEEEEE
Confidence 8899999999999999999
No 99
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.89 E-value=9.5e-22 Score=121.89 Aligned_cols=133 Identities=13% Similarity=0.101 Sum_probs=96.0
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee--eEEEEEEEEeccCCCcccCCC
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT--ETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~ 79 (168)
|.+.+.|+|++... ... . ..|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|... ..+
T Consensus 34 ~~~~~~W~k~g~~~---------~~~-~--~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~-------~~~ 94 (184)
T 2gi7_A 34 GVDLYRLEKLSSSR---------YQD-Q--AVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGV-------FAK 94 (184)
T ss_dssp TCSEEEEEETTTCC---------EES-S--SEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEESS-------SCC
T ss_pred CCCEEEEEECCccc---------cCc-c--cEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecCc-------CCC
Confidence 56899999988651 111 2 279999999999999999999876532 23466666432 124
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
|.+...+. ..+.+|+.+.|.|.+.+. .+.+.|++++..+...... ......|.|.+++.+|.|.|+|.|.|..
T Consensus 95 p~i~~~p~--~~v~~G~~v~l~C~~~~~-~~~~~w~k~g~~~~~~~~~----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 167 (184)
T 2gi7_A 95 PSLSAQPG--PAVSSGGDVTLQCQTRYG-FDQFALYKEGDPAPYKNPE----RWYRASFPIITVTAAHSGTYRCYSFSSR 167 (184)
T ss_dssp CEEEEECC--CSSCCTTCEEEEEECSSC-CCEEEEEECCCCTTSCCCC----EEEEESSSEEEETTCCSEEEEEEEECTT
T ss_pred CEEEeCCC--ceecCCCcEEEEEEcCCC-CcEEEEEECCCcCcceecC----CCceEEEEEccCCccCCeEEEEEEEeCC
Confidence 45555452 356799999999998764 4699999998876542211 1123468899999999999999999975
Q ss_pred c
Q psy16859 160 G 160 (168)
Q Consensus 160 g 160 (168)
+
T Consensus 168 ~ 168 (184)
T 2gi7_A 168 D 168 (184)
T ss_dssp S
T ss_pred C
Confidence 4
No 100
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.89 E-value=1.9e-22 Score=127.54 Aligned_cols=124 Identities=20% Similarity=0.207 Sum_probs=88.2
Q ss_pred EEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCC
Q psy16859 31 LHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPK 109 (168)
Q Consensus 31 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 109 (168)
..+|.|.+++.+|+|.|.|.+.+..+.... ...+.+..+ ++.....+ ....+..+..+.+.|.+.+.|.
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~c~~~g~p~ 147 (218)
T 4frw_A 78 DGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVP---------PLPSLNPG-PALEEGQGLTLAASCTAEGSPA 147 (218)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC---------CCCEEEEC-SCEETTCCSEEEEEEEEEEBSC
T ss_pred eEEEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEeee---------ccceeeee-eeeeeeeccccceeeeccCCcC
Confidence 457999999999999999999876554433 333334221 22222222 3456778899999999999999
Q ss_pred CeEEEeeCCEeccCCCCcEEEecC---CEEEEEEccCCCCCCeeEEEEEEcCCceeeEEE
Q psy16859 110 PKVTWMKGIKDITTSSRTMTETVN---DYVRLTLKRATDDENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 110 ~~~~W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 166 (168)
|.+.|++++..+....... ... ..+.|.|..+..+|.|.|+|.|.|+.|.....+
T Consensus 148 p~i~W~~~~~~~~~~~~~~--~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~ 205 (218)
T 4frw_A 148 PSVTWDTEVKGTTSSRSFK--HSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRI 205 (218)
T ss_dssp CEEEEEESSCCEEEEEEEE--CSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEE
T ss_pred ceEEEEECCcccccCceEe--cCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEE
Confidence 9999999887654322111 111 125799999999999999999999998765443
No 101
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.89 E-value=2.1e-21 Score=126.16 Aligned_cols=135 Identities=16% Similarity=0.203 Sum_probs=103.2
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|.+.|++++..+.. ... . ..|.|.+++.+|+|.|+|.+.|..+.....+.|.|.... .++
T Consensus 110 ~p~~~v~W~~~g~~~~~-----~~~---~--~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~-------~~p 172 (262)
T 3rjd_A 110 KLVYNVLYYRNGKAFKF-----FHW---N--SNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELF-------PAP 172 (262)
T ss_dssp CCCEEEEEEETTEEEEE-----EEE---C--CCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSS-------CCC
T ss_pred CCCceEEEEECCccccc-----cCC---C--CeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCC-------CCC
Confidence 47789999999988721 111 1 269999999999999999999988777777788885431 245
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCC-Ce----EEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPK-PK----VTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~----~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
.+...+ ...+..|+.+.|.|.+.+.|. +. +.|++++..+... .....|.|.++..+|.|.|+|.|
T Consensus 173 ~~~~~~--~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a 242 (262)
T 3rjd_A 173 VLNASV--TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR--------NTSSEYQILTARREDSGLYWCEA 242 (262)
T ss_dssp EEEESS--CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE--------ESCCEEEESSCCGGGCEEEEEEE
T ss_pred eEeecC--ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc--------CCCceEEEEEechhhCeEEEEEE
Confidence 555544 345789999999999998875 43 7888888866421 12347999999999999999999
Q ss_pred EcCCcee
Q psy16859 156 RNIYGSD 162 (168)
Q Consensus 156 ~n~~g~~ 162 (168)
.|..|..
T Consensus 243 ~n~~G~~ 249 (262)
T 3rjd_A 243 ATEDGNV 249 (262)
T ss_dssp EETTSSC
T ss_pred EcccCce
Confidence 9999964
No 102
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.89 E-value=2.6e-21 Score=122.40 Aligned_cols=149 Identities=17% Similarity=0.244 Sum_probs=99.7
Q ss_pred CCceEEEEECCEe------c----------CCCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccceee----E
Q psy16859 2 VKPEVIWLRGNTP------L----------PKSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE----T 60 (168)
Q Consensus 2 p~p~v~W~~~~~~------~----------~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~----~ 60 (168)
|.+.+.|||++.. + .....|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+... .
T Consensus 35 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~ 114 (214)
T 2zg1_A 35 PPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQN 114 (214)
T ss_dssp CCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTTEEEECCSS
T ss_pred CceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccCCHhhCceEEEEEEcCCCceeeecCC
Confidence 5789999998642 1 112356665543 13345899999999999999999998753221 3
Q ss_pred EEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC----CCCeEEEeeCCEeccCCCCcEEEecCCEE
Q psy16859 61 FARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS----PKPKVTWMKGIKDITTSSRTMTETVNDYV 136 (168)
Q Consensus 61 ~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~----p~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 136 (168)
.+.|.|...+. +|.+.. + . .+.+|+.++|.|.+.+. |.+.+.|++++....... ....+
T Consensus 115 ~~~l~V~~~~~-------~p~i~~-~-~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~~------~~~~~ 177 (214)
T 2zg1_A 115 KLNLEVTALIE-------KPDIHF-L-E--PLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPE------TTRSS 177 (214)
T ss_dssp CEEEEEECCCC-------CCEEC----C--CCCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSCSS------CCCSS
T ss_pred ceEEEEecCCC-------CCceec-C-c--cccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCCCC------ceeEE
Confidence 56777764321 333332 2 1 25689999999999764 788999999875432211 12234
Q ss_pred EEEEccCCCCCCeeEEEEEEcCCce--eeEEEE
Q psy16859 137 RLTLKRATDDENGTYFIVARNIYGS--DRAFVT 167 (168)
Q Consensus 137 ~l~i~~~~~~d~g~y~C~~~n~~g~--~~~~~~ 167 (168)
.|.|..+..+|.|.|+|.|.|..+. .+..++
T Consensus 178 ~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 178 ELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp EEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred EEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 7899999999999999999998644 344444
No 103
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.89 E-value=5.4e-22 Score=122.03 Aligned_cols=126 Identities=15% Similarity=0.237 Sum_probs=93.9
Q ss_pred CCce-EEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 2 VKPE-VIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 2 p~p~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
|.|. +.|++++..+... . .+|.|.+++.+|+|.|+|.+.+..+ ...+.|.|.. ++
T Consensus 35 p~~~~~~W~~~~~~~~~~----------~--~~L~i~~~~~~d~G~Y~C~~~n~~~--s~~~~l~V~~----------~~ 90 (175)
T 1fnl_A 35 PEDNSTQWFHNESLISSQ----------A--SSYFIDAATVNDSGEYRCQTNLSTL--SDPVQLEVHI----------GW 90 (175)
T ss_dssp TTBCCCEEEETTEEEESS----------C--SEEEESSCCGGGCEEEEEECSSSCC--CCCEEEEEEC----------SS
T ss_pred CCCcceEEEECCEEccCC----------c--eEEEEeCCCcccCEEEEEEeeCCcc--cccEEEEEeC----------CC
Confidence 4555 7899999887321 2 2799999999999999999987544 3355666641 22
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCC-eEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKP-KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
.....+ ...+.+|+.+.|.|.+.+.+++ .+.|++++..+... .....|.|.++..+|.|.|+|.|.|..
T Consensus 91 ~~~~~~--~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 160 (175)
T 1fnl_A 91 LLLQAP--RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF--------HHNSDFHIPKATLKDSGSYFCRGLVGS 160 (175)
T ss_dssp EEEECS--CSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE--------EECCCEEESSCCGGGCEEEEEEEEETT
T ss_pred ceeeCC--CceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC--------CCCCEEEEcccChhhCeEEEEEEEcCC
Confidence 333333 3567899999999999887665 89999999876321 112469999999999999999999976
Q ss_pred ce
Q psy16859 160 GS 161 (168)
Q Consensus 160 g~ 161 (168)
|.
T Consensus 161 ~~ 162 (175)
T 1fnl_A 161 KN 162 (175)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 104
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.89 E-value=5.7e-22 Score=125.35 Aligned_cols=157 Identities=13% Similarity=0.149 Sum_probs=105.0
Q ss_pred CceEEEEECC--Eec-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee-EEEEEEEEe
Q psy16859 3 KPEVIWLRGN--TPL-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE-TFARVDVIN 68 (168)
Q Consensus 3 ~p~v~W~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~ 68 (168)
.|.|.||+++ ..+ .....|+..... .+..+|.|.+++.+|+|.|.|.+.+..+... ....|.|..
T Consensus 32 ~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 110 (212)
T 1q0x_L 32 SNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLI-GDKAALTITGAQTEDEAIYFCALWSNNKLVFGGGTKLTVLG 110 (212)
T ss_dssp GGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred CCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEee-CCEEEEEECCCCccCCEEEEEEEecCchhhcCCCeEEEEec
Confidence 4789999953 221 112357766654 5667999999999999999999998765432 234566632
Q ss_pred ccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCC-CC-eEEEeeCCEeccCCCCc--EEEecC----CEEEEEE
Q psy16859 69 VSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSP-KP-KVTWMKGIKDITTSSRT--MTETVN----DYVRLTL 140 (168)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~-~~~W~~~~~~~~~~~~~--~~~~~~----~~~~l~i 140 (168)
.. ..+|.+...+.. .....|..++|.|.+.+.+ .+ .+.|++++..+...... ...... ....|.|
T Consensus 111 ~~------~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i 183 (212)
T 1q0x_L 111 QP------KSSPTVTLFPPS-SEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTL 183 (212)
T ss_dssp SC------CBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEE
T ss_pred CC------CCCCeeEEeCCC-HHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEE
Confidence 21 124555443322 2344688999999998854 33 89999999887643211 011111 1246889
Q ss_pred ccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 141 KRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 141 ~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
.....+|.|.|+|.|.|........++
T Consensus 184 ~~~~~~d~g~Y~C~a~n~~~~~~~~v~ 210 (212)
T 1q0x_L 184 TARAWERHSSYSCQVTHEGHSSNKTLS 210 (212)
T ss_dssp EHHHHTTCCEEEEEEEETTEEEEEEEE
T ss_pred cHHHccCCCcEEEEEEeCCcceeeeec
Confidence 888899999999999999877666553
No 105
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.88 E-value=5e-21 Score=124.38 Aligned_cols=158 Identities=20% Similarity=0.254 Sum_probs=104.4
Q ss_pred CCceEEEEECC--Eec----------------CCCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcc--------
Q psy16859 2 VKPEVIWLRGN--TPL----------------PKSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNE-------- 54 (168)
Q Consensus 2 p~p~v~W~~~~--~~~----------------~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~-------- 54 (168)
|.+.+.||+.. ..+ .....|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+.
T Consensus 36 ~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~ 115 (256)
T 3juy_B 36 SHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGEWGWDDSPY 115 (256)
T ss_dssp GGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCTTCCTT
T ss_pred cCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECCCCcccCEEEEEeEEeccccccccc
Confidence 67899999732 110 112357776633 255678999999999999999999886
Q ss_pred ----cceeeEEEEEEEEeccCCCc-----ccCCCCeEEecCCcceEeecCCeEEEEEEEccCCC-CeEEEeeC--CEecc
Q psy16859 55 ----YGYTETFARVDVINVSSGAV-----KHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPK-PKVTWMKG--IKDIT 122 (168)
Q Consensus 55 ----~~~~~~~~~l~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~~~W~~~--~~~~~ 122 (168)
.........|.|...+.... ....++.+...+ ..+.+.+|+.++|.|.+.+.+. +.+.|++. +..+.
T Consensus 116 ~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~ 194 (256)
T 3juy_B 116 DNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAP-GTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPR 194 (256)
T ss_dssp TTCSCCEECCCEEEEECSCC----------CCCCCCEEEEC-SEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCE
T ss_pred cccceeEECCceEEeecCCcccccccccCCCcceeEEEecC-CeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcE
Confidence 22233355677744321000 000133444445 5678899999999999998776 88999972 22111
Q ss_pred ------------CCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 123 ------------TSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 123 ------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
...++.........+|.|.+++.+|+|.|+|.+.|..+
T Consensus 195 ~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 195 LVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp EEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred EEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 12344444444557899999999999999999998543
No 106
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.88 E-value=4e-22 Score=126.42 Aligned_cols=151 Identities=16% Similarity=0.150 Sum_probs=100.8
Q ss_pred CceEEEEECC--Eec-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc-e-eeEEEEEEEE
Q psy16859 3 KPEVIWLRGN--TPL-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG-Y-TETFARVDVI 67 (168)
Q Consensus 3 ~p~v~W~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-~-~~~~~~l~v~ 67 (168)
.+.|.|+|++ ..+ .....|+..... .+..+|.|.+++.+|+|.|.|.+.+..+ . ......|.|.
T Consensus 31 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~ 109 (216)
T 2xzc_L 31 NNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKS-GTSATLGITGLQTGDEADYYCGTWDSSLNPVFGGGTKLEIK 109 (216)
T ss_dssp GSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEE-TTEEEEEECSCCGGGCEEEEEEEECTTSCEEEBCCEEEEEC
T ss_pred CCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEecc-CCEEEEEECCCCcccCEEEEEEEEeCCCcceECCCEEEEEc
Confidence 5799999953 211 112357776655 6677999999999999999999998765 2 2224456663
Q ss_pred eccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcE--EEecC-C----EEEE
Q psy16859 68 NVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTM--TETVN-D----YVRL 138 (168)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~--~~~~~-~----~~~l 138 (168)
.. ..+|.+...+... ....|..+.|.|.+.+ .|.+ .+.|++++..+....... ..... . .+.|
T Consensus 110 ~~-------~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L 181 (216)
T 2xzc_L 110 RT-------VAAPSVFIFPPSD-EQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTL 181 (216)
T ss_dssp CC-------CBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEE
T ss_pred CC-------CCCCceEEeCCCh-hhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEE
Confidence 21 1245444433222 2336889999999988 5554 899999998876541000 00011 1 1378
Q ss_pred EEccCCCCCCeeEEEEEEcCCcee
Q psy16859 139 TLKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 139 ~i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
.|..+..+|.|.|+|.|.|.....
T Consensus 182 ~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 182 TLSKADYEKHKVYACEVTHQGLSS 205 (216)
T ss_dssp EEEHHHHTTCCEEEEEEECTTCSS
T ss_pred EECHHHhCCCCcEEEEEEcCCCCC
Confidence 899999999999999999987543
No 107
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.88 E-value=2.8e-21 Score=139.89 Aligned_cols=137 Identities=23% Similarity=0.326 Sum_probs=107.2
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee-EEEEEEEEeccCCCcccCCCC
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE-TFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~ 80 (168)
|.|.+.|++++..+. ...++.+... + ..|.|.+++.+|+|.|+|.+.|..+... ..+.|.|...+ +
T Consensus 138 p~~~v~W~~~g~~l~-~~~~~~~~~~-~--~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p---------~ 204 (642)
T 1e07_A 138 QDATYLWWVNNQSLP-VSPRLQLSNG-N--RTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGP---------D 204 (642)
T ss_pred CCeeEEEEECCeECC-CCCceEEcCC-C--CEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCC---------C
Confidence 678999999999984 4456655433 3 3899999999999999999999877643 35777775432 2
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
.....+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ...|.|.++..+|+|.|+|.+.|..|
T Consensus 205 ~~~~~~-~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~-----------~~~L~i~~~~~~d~G~Y~C~a~n~~g 272 (642)
T 1e07_A 205 APTISP-LNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQS-----------TQELFIPNITVNNSGSYTCQAHNSDT 272 (642)
T ss_pred CcEEec-CCcccccCCEEEEEEEcCCCCCcEEEEEECCeEccc-----------CCceEEecccccCCeEEEEEEEeCCC
Confidence 222334 345678999999999999999999999999987642 13689999999999999999999987
Q ss_pred eee
Q psy16859 161 SDR 163 (168)
Q Consensus 161 ~~~ 163 (168)
...
T Consensus 273 ~~~ 275 (642)
T 1e07_A 273 GLN 275 (642)
T ss_pred ceE
Confidence 653
No 108
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.88 E-value=1.7e-21 Score=120.38 Aligned_cols=134 Identities=11% Similarity=0.185 Sum_probs=94.5
Q ss_pred CCceEEEEE--CCEecC---------CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee--EEEEEEEEe
Q psy16859 2 VKPEVIWLR--GNTPLP---------KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE--TFARVDVIN 68 (168)
Q Consensus 2 p~p~v~W~~--~~~~~~---------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~l~v~~ 68 (168)
|.|.|.|++ ++..|. ....|+.+.. ++ +|.|.+++.+|+|.|+|.+.+..|... ..+.|.|..
T Consensus 29 ~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~--ng--sL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~~ 104 (182)
T 1hnf_A 29 DIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFK--NG--TLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQE 104 (182)
T ss_dssp SEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECT--TS--CEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEEC
T ss_pred cCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECC--CC--CEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEcC
Confidence 367999999 887652 1345666553 33 799999999999999999999877654 355677753
Q ss_pred ccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCC
Q psy16859 69 VSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDEN 148 (168)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 148 (168)
+. ..|.+.. .+..+.|.|.+.+.|.+.+.|++++..+ .. ... .+.+.. ...|.
T Consensus 105 ~~-------~~P~i~~---------~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~-------~~~--~i~~~~-~~~d~ 157 (182)
T 1hnf_A 105 RV-------SKPKISW---------TCINTTLTCEVMNGTDPELNLYQDGKHL-KL-------SQR--VITHKW-TTSLS 157 (182)
T ss_dssp CC-------CCCEEEE---------ETTTTEEEEECSSCSSCEEEEEESSCEE-EE-------ESS--CEEEEC-CSCEE
T ss_pred cC-------CCCEEEE---------ccCcEEEEeEccCCCCCEEEEEECCEEC-CC-------CCc--EEEEec-ccCCC
Confidence 21 1222222 2336899999999899999999998876 11 111 222322 46889
Q ss_pred eeEEEEEEcCCceeeEEE
Q psy16859 149 GTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 149 g~y~C~~~n~~g~~~~~~ 166 (168)
|.|+|.|.|.+|......
T Consensus 158 G~Y~C~a~N~~~~~~s~~ 175 (182)
T 1hnf_A 158 AKFKCTAGNKVSKESSVE 175 (182)
T ss_dssp EEEEEEEECSSCEEEEEE
T ss_pred cEEEEEEEeCCCCcEEcc
Confidence 999999999999887654
No 109
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.88 E-value=3.5e-22 Score=124.24 Aligned_cols=141 Identities=15% Similarity=0.147 Sum_probs=98.6
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee--eEEEEEEEEeccCCCcccCCC
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT--ETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~ 79 (168)
+.+.+.|+|++..+.....+. . .......|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|... ..+
T Consensus 30 ~~~~~~w~k~g~~~~~~~~~~--~-~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~-------~~~ 99 (188)
T 1oll_A 30 GAVEYQLHFEGSLFAVDRPKP--P-ERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEM-------YDT 99 (188)
T ss_dssp TCCEEEEEETTEEEEEECCSS--C-TTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEESC-------SCC
T ss_pred CCCEEEEEECCCccccccccc--C-CCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEEeccc-------CCC
Confidence 346899999998763111110 0 11334689999999999999999998764432 23466666432 124
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|++++..+.. ..........|.|.+++.+|+|.|+|.+.|..
T Consensus 100 p~i~~~p~--~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~----~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 100 PTLSVHPG--PEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp CEEEEESC--SEEETTCEEEEEEECSS-SCSEEEEEEESSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred CeEEECCC--CccccCCEEEEEEEcCC-CCCEEEEEECCccccc----cccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 55554452 45789999999999876 4578999998865543 11233455789999999999999999999864
No 110
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.88 E-value=1.4e-21 Score=125.41 Aligned_cols=152 Identities=18% Similarity=0.177 Sum_probs=102.7
Q ss_pred CCceEEEEECC-------------EecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee-EEEEEEEE
Q psy16859 2 VKPEVIWLRGN-------------TPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE-TFARVDVI 67 (168)
Q Consensus 2 p~p~v~W~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~ 67 (168)
|.+.+.|||++ ........|+..... .+..+|.|.+++.+|+|.|.|.+.+..+... ....|.|.
T Consensus 52 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~ 130 (237)
T 3sob_L 52 VSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGS-GTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIK 130 (237)
T ss_dssp CTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEE
T ss_pred CCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcC-CCEEEEEECCCChhhCeEEEEeeccCCceEEcCcEEEEEe
Confidence 57899999942 111123457776655 6678999999999999999999987665332 24566665
Q ss_pred eccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CC-CCeEEEeeCCEeccCCC-Cc-EEEe-cCC----EEEE
Q psy16859 68 NVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SP-KPKVTWMKGIKDITTSS-RT-MTET-VND----YVRL 138 (168)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p-~~~~~W~~~~~~~~~~~-~~-~~~~-~~~----~~~l 138 (168)
.. ..+|.+...+. ......|+.+.|.|.+.+ .| .+.+.|++++..+.... .. .... ... ...|
T Consensus 131 ~~-------~~~p~v~~~~~-~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L 202 (237)
T 3sob_L 131 RT-------VAAPSVFIFPP-SDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTL 202 (237)
T ss_dssp CC-------CBCCEEEEECC-CHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEE
T ss_pred cC-------CCCCceEEeCC-ChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEE
Confidence 42 23455544332 223446888999999988 44 57999999998876421 00 0000 111 2468
Q ss_pred EEccCCCCCCeeEEEEEEcCCcee
Q psy16859 139 TLKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 139 ~i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
.|.....+|.|.|+|.|.|.....
T Consensus 203 ~i~~~~~~d~g~Y~C~a~n~~~~~ 226 (237)
T 3sob_L 203 TLSKADYEKHKVYACEVTHQGLSS 226 (237)
T ss_dssp EEEHHHHTTCCEEEEEEECTTCSS
T ss_pred EEcHHHccCCCcEEEEEeeCCCCC
Confidence 888899999999999999987544
No 111
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.88 E-value=1.6e-21 Score=138.13 Aligned_cols=157 Identities=15% Similarity=0.133 Sum_probs=107.5
Q ss_pred CCCceEEEEECC--EecC-----------CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee---eEEEEE
Q psy16859 1 YVKPEVIWLRGN--TPLP-----------KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT---ETFARV 64 (168)
Q Consensus 1 ~p~p~v~W~~~~--~~~~-----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~---~~~~~l 64 (168)
+|.|.|.|||++ ..+. ....|+..... +...+|.|.+++.+|+|.|+|.+.|..|.. ...+.|
T Consensus 27 ~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l 105 (523)
T 2rcj_C 27 SGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKS-GTSASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKV 105 (523)
T ss_pred cCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecC-CCEEEEEECCCChhhCEEEEEEEccCCCccccccCceEE
Confidence 378899999974 2110 11346664433 556789999999999999999999876532 234566
Q ss_pred EEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCC--eEEEeeCCEeccCCCCcEEE---ecCC---EE
Q psy16859 65 DVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKP--KVTWMKGIKDITTSSRTMTE---TVND---YV 136 (168)
Q Consensus 65 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~~~~~~~~~~~---~~~~---~~ 136 (168)
.|...+ ..+|.+...+. ...+..|+.+.|.|.+.|.|++ .+.|++++..+......... .... ..
T Consensus 106 ~V~~~~------~~~P~~~~~~~-~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s 178 (523)
T 2rcj_C 106 TVLGQP------KANPTVTLFPP-SSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASS 178 (523)
T ss_pred EeccCC------CcCCeEEecCC-cccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEE
Confidence 664322 13455555453 3455678999999999987754 89999999877543221100 1111 14
Q ss_pred EEEEccCCCCCCeeEEEEEEcCCceeeEE
Q psy16859 137 RLTLKRATDDENGTYFIVARNIYGSDRAF 165 (168)
Q Consensus 137 ~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 165 (168)
.|.|.++..+|.|.|+|.|.|..|.....
T Consensus 179 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 207 (523)
T 2rcj_C 179 YLSLTPEQWKSHRSYSCQVTHEGSTVEKT 207 (523)
T ss_pred EEEEechhcCCCceEEEEEEecCcccccc
Confidence 69999999999999999999998866543
No 112
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.88 E-value=6e-21 Score=124.05 Aligned_cols=147 Identities=19% Similarity=0.251 Sum_probs=102.7
Q ss_pred CCceEEEEEC--CEec---C-------------CCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccce-----
Q psy16859 2 VKPEVIWLRG--NTPL---P-------------KSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGY----- 57 (168)
Q Consensus 2 p~p~v~W~~~--~~~~---~-------------~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~----- 57 (168)
|.+.|.|+++ +..+ . ....|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+.
T Consensus 30 ~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~ 109 (256)
T 1nqb_A 30 TSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDY 109 (256)
T ss_dssp GGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCTTSSSSCSE
T ss_pred CCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCChhhCEEEEEEEeeccCccceeE
Confidence 3679999994 2211 0 11357776653 245679999999999999999999987552
Q ss_pred eeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCC-----eEEEee--CCEecc--------
Q psy16859 58 TETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKP-----KVTWMK--GIKDIT-------- 122 (168)
Q Consensus 58 ~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-----~~~W~~--~~~~~~-------- 122 (168)
......|.|. .++.+...| ..+.+.+|+.++|.|.+.+.|.+ .+.|++ ++..+.
T Consensus 110 ~~~~~~L~V~----------~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~ 178 (256)
T 1nqb_A 110 WGQGTTVTVS----------SDIELTQTP-LSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSN 178 (256)
T ss_dssp ECCCEEEEEC----------CCCCEEEEC-SEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTE
T ss_pred EcCceeeeec----------ccccEEecC-cEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCC
Confidence 1123566662 233444444 46678899999999999988765 899998 444321
Q ss_pred ----CCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 123 ----TSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 123 ----~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
...++.........+|.|.+++.+|+|.|+|.+.|..
T Consensus 179 ~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 219 (256)
T 1nqb_A 179 RFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHV 219 (256)
T ss_dssp ECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred CCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCC
Confidence 1234443334455789999999999999999999853
No 113
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.88 E-value=1.8e-21 Score=119.76 Aligned_cols=123 Identities=15% Similarity=0.225 Sum_probs=92.9
Q ss_pred eEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEe
Q psy16859 5 EVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLT 84 (168)
Q Consensus 5 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~ 84 (168)
.+.|++++..+... . .+|.|.+++.+|+|.|+|.+.+..+. ..+.|.|. .++....
T Consensus 36 ~i~W~~~~~~~~~~----------~--~~L~i~~v~~~d~G~Y~C~~~~~~~s--~~~~l~V~----------~~~~~~~ 91 (176)
T 1f2q_A 36 STKWFHNGSLSEET----------N--SSLNIVNAKFEDSGEYKCQHQQVNES--EPVYLEVF----------SDWLLLQ 91 (176)
T ss_dssp CCEEEETTEECSCC----------S--SEEEECSCCGGGCEEEEEECTTSSCC--CCEEEEEE----------CSSEEEE
T ss_pred eEEEEECCeECCCC----------c--eEEEEeccceecCEEEEEEcCCcccc--ccEEEEEe----------Ccceeec
Confidence 69999999987421 1 27999999999999999999875543 34566663 1333333
Q ss_pred cCCcceEeecCCeEEEEEEEc-cCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCce
Q psy16859 85 RPDTMMSVALGEDISFSFRLA-GSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 85 ~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
.+ ...+..|+.+.|.|.+. +.|.+.+.|++++..+.... ....|.|.++..+|+|.|+|.+.|..+.
T Consensus 92 ~~--~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~~~ 159 (176)
T 1f2q_A 92 AS--AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY--------ENHNISITNATVEDSGTYYCTGKVWQLD 159 (176)
T ss_dssp ES--CSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC--------CSSEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CC--cceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec--------CCCeEEECCCCcccCEEEEEEEEeCCcc
Confidence 33 24678999999999995 56677899999998774321 1247999999999999999999997543
No 114
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.88 E-value=2.5e-21 Score=118.36 Aligned_cols=126 Identities=17% Similarity=0.260 Sum_probs=94.3
Q ss_pred CceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeE
Q psy16859 3 KPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMF 82 (168)
Q Consensus 3 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~ 82 (168)
.+.+.|++++..+.... . .+.|.+++.+|+|.|+|.+.+.... ..+.|.|.. ++.+
T Consensus 34 ~~~~~W~~~g~~~~~~~---------~---~~~~~~~~~~d~G~Y~C~~~~~~~s--~~~~l~v~~----------~~~~ 89 (170)
T 3ry4_A 34 SDSIQWFHNGNLIPTHT---------Q---PSYRFKANNNDSGEYTCQTGQTSLS--DPVHLTVLF----------EWLV 89 (170)
T ss_dssp SSCEEEEETTEECTTCC---------S---SEEEEECCGGGCEEEEEEETTSBCC--CCEEEEEEC----------CSEE
T ss_pred cceEEEEECCeEcccCc---------c---ceEEEecccccCeEEEEEEeCCCce--EeEEEEEEC----------CceE
Confidence 67999999999884321 1 3667789999999999999875433 345666642 3333
Q ss_pred EecCCcceEeecCCeEEEEEEEc-cCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCce
Q psy16859 83 LTRPDTMMSVALGEDISFSFRLA-GSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
...+ ...+.+|+.+.|.|.+. +.|.+.+.|++++..+... .....|.|.++..+|.|.|+|.+.|..|.
T Consensus 90 ~~~~--~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 159 (170)
T 3ry4_A 90 LQTP--HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS--------HLDPTFSIPQANHSHSGDYHCTGNIGYTL 159 (170)
T ss_dssp EECS--CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEE--------SSCCEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred ecCC--CceeecCCeEEEEEECCCCCCCceEEEEECCeEcccc--------CCCCeEEEEeccccCCEEEEEEEEeCcCc
Confidence 3333 34678899999999995 4566889999998875421 12347999999999999999999999987
Q ss_pred e
Q psy16859 162 D 162 (168)
Q Consensus 162 ~ 162 (168)
.
T Consensus 160 ~ 160 (170)
T 3ry4_A 160 F 160 (170)
T ss_dssp E
T ss_pred c
Confidence 3
No 115
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.88 E-value=5e-21 Score=137.19 Aligned_cols=151 Identities=20% Similarity=0.249 Sum_probs=109.2
Q ss_pred CCCceE----EEEE--CCE--ecCC--------CCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEE
Q psy16859 1 YVKPEV----IWLR--GNT--PLPK--------SSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFAR 63 (168)
Q Consensus 1 ~p~p~v----~W~~--~~~--~~~~--------~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 63 (168)
+|.|.+ .|++ ++. .+.. ...++.+... ..+..+|.|.+++.+|+|.|+|.+ |..+.....+.
T Consensus 358 ~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~ 436 (585)
T 2ocw_A 358 KESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVE 436 (585)
T ss_pred CCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEE
Confidence 477777 7999 886 4421 2345555532 245567999999999999999998 77777777788
Q ss_pred EEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEc----cCCCCeEEEeeCCEeccCCCC------cEEE-ec
Q psy16859 64 VDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLA----GSPKPKVTWMKGIKDITTSSR------TMTE-TV 132 (168)
Q Consensus 64 l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~----~~p~~~~~W~~~~~~~~~~~~------~~~~-~~ 132 (168)
|.|... +|.+.. + ....+..|+.+.|.|.+. +.|.+.+.|++++..+..... +... ..
T Consensus 437 l~V~~~---------~p~~~~-~-~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~ 505 (585)
T 2ocw_A 437 IKIIEG---------EPNLKV-P-GNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDEN 505 (585)
T ss_pred EEEecC---------cccccc-C-CceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCc
Confidence 888532 333332 3 456788999999999997 667888999999876643221 1111 12
Q ss_pred CCEEEEEEccCCCCCCeeEEEEEEcCCceee
Q psy16859 133 NDYVRLTLKRATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 133 ~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 163 (168)
.....|.|.++..+|+|.|+|.|.|..|...
T Consensus 506 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 536 (585)
T 2ocw_A 506 SRLVSLTLNLVTRADEGWYWCGVKQGHFYGE 536 (585)
T ss_pred ccEEEEEECCCCcccCeEEEEEeEeCCCccE
Confidence 2336899999999999999999999998654
No 116
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.88 E-value=7.4e-21 Score=125.24 Aligned_cols=156 Identities=22% Similarity=0.365 Sum_probs=103.1
Q ss_pred CCceEEEEECC--Eec----------------CCCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccc---ee-
Q psy16859 2 VKPEVIWLRGN--TPL----------------PKSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYG---YT- 58 (168)
Q Consensus 2 p~p~v~W~~~~--~~~----------------~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~---~~- 58 (168)
|.|.+.||+++ ..+ .....|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+ ..
T Consensus 56 ~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~ 135 (282)
T 1qok_A 56 KDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDY 135 (282)
T ss_dssp GGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSSCCCEE
T ss_pred CCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCChhhCEEEEEEeccCCCccceee
Confidence 36899999953 111 011357766543 24567999999999999999999998765 11
Q ss_pred -eEEEEEEEEeccCCC----c-ccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEee--CCEecc--------
Q psy16859 59 -ETFARVDVINVSSGA----V-KHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMK--GIKDIT-------- 122 (168)
Q Consensus 59 -~~~~~l~v~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~--~~~~~~-------- 122 (168)
...+.|.|...+... . ....++.+...| ..+.+.+|+.++|.|.+.+.+ +.+.|++ ++..+.
T Consensus 136 ~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~ 213 (282)
T 1qok_A 136 WGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSP-AIMSASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSN 213 (282)
T ss_dssp ECCCEEEEEEC---------------CCCEEEEC-SEEEECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTE
T ss_pred eCCCEEEEEecCCcccCCccCCCCccceEEecCC-CEEEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecC
Confidence 124567775432100 0 000123344444 467788999999999999988 8999998 444331
Q ss_pred ----CCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 123 ----TSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 123 ----~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
...++.........+|.|.+++.+|+|.|+|.+.|..
T Consensus 214 ~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 254 (282)
T 1qok_A 214 LASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSY 254 (282)
T ss_dssp ECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred CCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCC
Confidence 1234443334455789999999999999999999853
No 117
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.88 E-value=1.7e-21 Score=122.28 Aligned_cols=144 Identities=15% Similarity=0.088 Sum_probs=95.6
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc-----eeeEEEEEEEEeccCCCccc
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG-----YTETFARVDVINVSSGAVKH 76 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~~~~~~~~~ 76 (168)
|.+.+.|+|++..+.... +............|.|.+++.+|+|.|+|.+.+... .....+.|.|....
T Consensus 34 ~~~~~~w~k~g~~~~~~~-~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~------ 106 (201)
T 1nkr_A 34 MFEHFLLHREGMFNDTLR-LIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLY------ 106 (201)
T ss_dssp CCSEEEEEEESSSCEEEE-EECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSS------
T ss_pred CCCEEEEEECCCcCCcce-eeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCCCCCEEEEeeccC------
Confidence 678999999987652110 000011112345899999999999999999986421 12235667775421
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecC-CEEEEEEccCCCCCCeeEEEEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVN-DYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
.+|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|++++..+............ ....|.|.+++ |+|.|+|.+
T Consensus 107 -~~p~i~~~p~--~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a 180 (201)
T 1nkr_A 107 -EKPSLSAQPG--PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFG 180 (201)
T ss_dssp -CCCEEEEESC--SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEE
T ss_pred -CCCceecCCC--CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEE
Confidence 2455555553 36789999999999986 56789999998765432211111111 24679999998 999999999
Q ss_pred EcC
Q psy16859 156 RNI 158 (168)
Q Consensus 156 ~n~ 158 (168)
.+.
T Consensus 181 ~~~ 183 (201)
T 1nkr_A 181 SFH 183 (201)
T ss_dssp EET
T ss_pred EcC
Confidence 865
No 118
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.88 E-value=1.3e-21 Score=127.22 Aligned_cols=157 Identities=18% Similarity=0.258 Sum_probs=103.1
Q ss_pred CCceEEEEEC--CEe---c------------CCCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccc-------
Q psy16859 2 VKPEVIWLRG--NTP---L------------PKSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYG------- 56 (168)
Q Consensus 2 p~p~v~W~~~--~~~---~------------~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~------- 56 (168)
|.|.|.||++ +.. + .....|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+..|
T Consensus 30 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~ 109 (257)
T 1f3r_B 30 TSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWY 109 (257)
T ss_dssp TTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTCCEEEEEEEESSSSCCSSCCC
T ss_pred CCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcccCEEEEEEEcccccCcccccc
Confidence 3789999995 211 1 012357776653 25567999999999999999999998743
Q ss_pred ee--eEEEEEEEEeccCCC----cc-cCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEee--CCEecc-----
Q psy16859 57 YT--ETFARVDVINVSSGA----VK-HEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMK--GIKDIT----- 122 (168)
Q Consensus 57 ~~--~~~~~l~v~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~--~~~~~~----- 122 (168)
.. .....|.|...+... .. ...++.+...+ ..+.+.+|+.++|.|.+.+.|.+.+.|++ ++..+.
T Consensus 110 ~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~ 188 (257)
T 1f3r_B 110 FDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSP-SLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYN 188 (257)
T ss_dssp EEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEET-SEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEET
T ss_pred ccccCCceEEEEEeCCccccccccCCCccceEEEccC-CEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEE
Confidence 11 123567774322100 00 00111222233 45668899999999999998888999998 444321
Q ss_pred -------CCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 123 -------TSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 123 -------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
...++.........+|.|.++..+|+|.|+|.+.|..
T Consensus 189 ~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 189 TNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp TTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred ccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 1233433333445689999999999999999999964
No 119
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.88 E-value=5.2e-21 Score=122.92 Aligned_cols=158 Identities=17% Similarity=0.233 Sum_probs=99.6
Q ss_pred CCCceEEEEECC--Eec--------------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee-----e
Q psy16859 1 YVKPEVIWLRGN--TPL--------------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT-----E 59 (168)
Q Consensus 1 ~p~p~v~W~~~~--~~~--------------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-----~ 59 (168)
.|.|.|.|+|+. ..+ .....|+.+........+|.|.+++.+|+|.|.|.+.+..+.. .
T Consensus 26 ~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~ 105 (238)
T 2p1y_A 26 NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFCASGDLGQTNERLFFG 105 (238)
T ss_dssp SCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEC------CEEEC
T ss_pred CCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCeeEEEEEEeCCCccccceeC
Confidence 377999999952 110 1123467665432445689999999999999999999875421 1
Q ss_pred EEEEEEEEeccCCCcc--cCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCE--e---c---------cC
Q psy16859 60 TFARVDVINVSSGAVK--HEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIK--D---I---------TT 123 (168)
Q Consensus 60 ~~~~l~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~--~---~---------~~ 123 (168)
....|.|...+..... ....+.+...+ ..+.+.+|+.++|.|.+.+.|.+.+.|++++. . + ..
T Consensus 106 ~~~~l~V~~~~~~~~p~~~~~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~ 184 (238)
T 2p1y_A 106 HGTKLSVLGSADDAKKDAAKKDGQVRQSP-QSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKE 184 (238)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHTCCEEEC-SEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEE
T ss_pred CCeEEEEeccCCCCcCCcccceeeEEccC-ceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCccc
Confidence 2345666432100000 00001333334 46778899999999999999999999998531 1 0 01
Q ss_pred CCCcEEE--ecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 124 SSRTMTE--TVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 124 ~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
..++... ......+|.|.+++.+|+|.|+|.|.|..
T Consensus 185 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 185 DGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp ETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 1233322 12334689999999999999999999973
No 120
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.88 E-value=1.2e-21 Score=138.94 Aligned_cols=154 Identities=14% Similarity=0.163 Sum_probs=110.3
Q ss_pred CCceEEEEE-CCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCe-EEEEEEEcccceeeE-EEEEEEEeccCCCcccCC
Q psy16859 2 VKPEVIWLR-GNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAG-KYTCRVSNEYGYTET-FARVDVINVSSGAVKHEK 78 (168)
Q Consensus 2 p~p~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~~ 78 (168)
|.|.+.||+ ++..+ ....++..... + .|.|.+++.+|+| .|+|.+.|..+.... .+.|.|.... ..
T Consensus 142 ~~~~v~W~~~~g~~l-~~~~~~~~~~~--~--~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~------~~ 210 (524)
T 2ec8_A 142 EVTNYSLKGCQGKPL-PKDLRFIPDPK--A--GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAF------KA 210 (524)
T ss_dssp CCSCEEEECSSSCCC-CSSCEEEEETT--T--EEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCC------CS
T ss_pred ccceEEEEccCCcCc-CCCCceeECCC--c--cEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCC------CC
Confidence 458999998 78777 34455554433 2 6999999999999 999999988665544 6777775321 24
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCe-EEEeeCCEec--cCCCCcEEE---ecCCEEEEEEccCCCCCCeeEE
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPK-VTWMKGIKDI--TTSSRTMTE---TVNDYVRLTLKRATDDENGTYF 152 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~~~~~~--~~~~~~~~~---~~~~~~~l~i~~~~~~d~g~y~ 152 (168)
+|.+...+ ....+..|+.+.|.|.+.+.|.+. +.|++++..+ ......... .......|.|.++..+|+|.|+
T Consensus 211 ~p~i~~~~-~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 289 (524)
T 2ec8_A 211 VPVVSVSK-ASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFM 289 (524)
T ss_dssp CCEEECSC-SEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEE
T ss_pred CCcEEecC-CcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEE
Confidence 66666666 456889999999999999988886 9999988763 221111111 0122368999999999999999
Q ss_pred EEEEcCCceeeEEEE
Q psy16859 153 IVARNIYGSDRAFVT 167 (168)
Q Consensus 153 C~~~n~~g~~~~~~~ 167 (168)
|.+.|..|.....+.
T Consensus 290 C~a~n~~g~~~~~~~ 304 (524)
T 2ec8_A 290 CYANNTFGSANVTTT 304 (524)
T ss_dssp EEEECSSCEEEEEEE
T ss_pred EEEEecCCceEEEEE
Confidence 999999998765543
No 121
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.88 E-value=2.7e-22 Score=127.59 Aligned_cols=154 Identities=21% Similarity=0.252 Sum_probs=99.7
Q ss_pred ceEEEEECCEec------------CCCCCceEEEec--CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 4 PEVIWLRGNTPL------------PKSSPRFKYIED--SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 4 p~v~W~~~~~~~------------~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
+.+.|++++... .....|+.+... ..+..+|.|.+++.+|+|.|+|.+.+. +.....+.|.|..+
T Consensus 30 ~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~V~~~ 108 (222)
T 4i0k_A 30 LNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDEGSYTCFVSIQ-DFDSAAVSLQVAAP 108 (222)
T ss_dssp EEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGCSCEEEEEEEC-CCCCCCCCCCCCBC
T ss_pred eEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccCEEEEEEEEeC-CCceEEEEEEEEcC
Confidence 789999987432 012234433321 122457999999999999999999975 33334455555332
Q ss_pred cCCCcccCCCCeEEecCCcceEeecCCeEEEEEEE-ccCCCCeEEEee-CCEeccCCCCcEEEec--CCEEEEEEccCCC
Q psy16859 70 SSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRL-AGSPKPKVTWMK-GIKDITTSSRTMTETV--NDYVRLTLKRATD 145 (168)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~-~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~ 145 (168)
. .+|.+...+ ...+..|+.+.|.|.+ .+.|.+.+.|++ ++..+........... .....|.|.++..
T Consensus 109 ~-------~~p~i~~~~--~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~ 179 (222)
T 4i0k_A 109 Y-------SKPSMTLEP--NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVL 179 (222)
T ss_dssp C-------CCCEEECCC-------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEEC
T ss_pred C-------CCCcEEeCC--CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEe
Confidence 1 234444444 2356789999999999 788999999998 4554443222111111 2234578889999
Q ss_pred CCCeeEEEEEEcCCceeeEEEE
Q psy16859 146 DENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 146 ~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
+|.|.|+|.|.|..|.....+.
T Consensus 180 ~d~G~Y~C~a~n~~g~~~~~~~ 201 (222)
T 4i0k_A 180 GANGTYSCLVRNPVLQQDAHGS 201 (222)
T ss_dssp CTTCEEEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEEECCCCCCceEEE
Confidence 9999999999999998876554
No 122
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.88 E-value=1.2e-21 Score=123.82 Aligned_cols=151 Identities=12% Similarity=0.188 Sum_probs=100.8
Q ss_pred CCceEEEEECC---Ee----------cCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee-eEEEEEEEE
Q psy16859 2 VKPEVIWLRGN---TP----------LPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT-ETFARVDVI 67 (168)
Q Consensus 2 p~p~v~W~~~~---~~----------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~ 67 (168)
|.+.+.|||.+ .. ......|+..... .+..+|.|.+++.+|+|.|.|.+.+..+.. .....|.|.
T Consensus 29 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~ 107 (213)
T 3r06_A 29 ISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGS-GRDSSFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEIK 107 (213)
T ss_dssp CTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGGCSEEEEEECSSSSCEECCCEEEEEC
T ss_pred cCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEecc-CCEEEEEECCCCcccCEEEEEecccCCceEEcCCceEEEe
Confidence 67899999832 11 1112457776655 667899999999999999999998875433 234566663
Q ss_pred eccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCC--CeEEEeeCCEeccCCC-Cc-EEEe--cCC---EEEE
Q psy16859 68 NVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPK--PKVTWMKGIKDITTSS-RT-MTET--VND---YVRL 138 (168)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~~~~~~~~~-~~-~~~~--~~~---~~~l 138 (168)
.. ..+|.+...+. ......|..+.|.|.+.+.++ +.+.|++++..+.... .. .... .+. ...|
T Consensus 108 ~~-------~~~p~v~~~~~-~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l 179 (213)
T 3r06_A 108 RA-------DAKPTVSIFPP-SSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTL 179 (213)
T ss_dssp CC-------CBCCEEEEECC-CHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEE
T ss_pred cc-------CCCceeeeeCC-CceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEE
Confidence 22 23455554442 334457888999999988554 3799999998876421 00 0000 011 1467
Q ss_pred EEccCCCCCCeeEEEEEEcCCce
Q psy16859 139 TLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 139 ~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
.+.....+|.|.|+|.|.|....
T Consensus 180 ~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 180 SLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp EEEHHHHHTCCEEEEEEEETTCS
T ss_pred EeCHHHhccCCeEEEEEEecccC
Confidence 78888888999999999998644
No 123
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.88 E-value=1.6e-21 Score=127.28 Aligned_cols=150 Identities=18% Similarity=0.228 Sum_probs=99.0
Q ss_pred CCceEEEEECCEecCCC-----------------CCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE--E
Q psy16859 2 VKPEVIWLRGNTPLPKS-----------------SPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET--F 61 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~-----------------~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~--~ 61 (168)
|.+.|.|++++...... ..|+.+..+ ..+..+|.|.+++.+|+|.|+|.+.+..+.... .
T Consensus 36 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~ 115 (268)
T 3mj6_A 36 HVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKP 115 (268)
T ss_dssp CEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCGGGCEEEEEEEEETTCCCEEEEE
T ss_pred ceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCHhHCEEEEEEEEecCCcceEEEE
Confidence 56789999965432111 134443321 123357999999999999999999986554433 4
Q ss_pred EEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEE---ccCCCCeEEEeeC-CEeccC--------------
Q psy16859 62 ARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRL---AGSPKPKVTWMKG-IKDITT-------------- 123 (168)
Q Consensus 62 ~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~---~~~p~~~~~W~~~-~~~~~~-------------- 123 (168)
+.|.|. + ..| ....+..|+.+.|.|.+ .+.|.+.+.|+++ +.....
T Consensus 116 ~~l~V~--~-------------~~p-~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~ 179 (268)
T 3mj6_A 116 VELWVL--P-------------EEP-RDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGK 179 (268)
T ss_dssp EEEEEE--C-------------CCC-SEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCE
T ss_pred EEEEEe--c-------------cCC-CccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccc
Confidence 444442 1 012 35678899999999999 5678999999983 321110
Q ss_pred ---CCCc--EEEe----cCCEEEEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 124 ---SSRT--MTET----VNDYVRLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 124 ---~~~~--~~~~----~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
..++ .... ......|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 180 ~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 232 (268)
T 3mj6_A 180 FQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIV 232 (268)
T ss_dssp EECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred cccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEE
Confidence 0000 0000 122357999999999999999999999988776554
No 124
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.88 E-value=6.3e-22 Score=134.50 Aligned_cols=141 Identities=18% Similarity=0.155 Sum_probs=104.1
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|.+.|++++..+ ... . ..|.|.+++.+|+|.|+|.+.+..+.....+.+.|...+ .
T Consensus 123 ~p~~~v~W~~~~~~~-------~~~---~--~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p---------~ 181 (363)
T 1wio_A 123 GSSPSVQCRSPRGKN-------IQG---G--KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ---------K 181 (363)
T ss_dssp TCCCCEEEECSSSCE-------EEE---S--SEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCS---------C
T ss_pred CCCCeEEEEcCCCcc-------ccc---c--eEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCC---------C
Confidence 488999999987543 111 2 279999999999999999999876666556666664221 1
Q ss_pred eEEecCCcceEeecCCeEEEEEEEcc-----CCCCeEEEeeCCEeccC--------CCCcEEEe----------cCCEEE
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAG-----SPKPKVTWMKGIKDITT--------SSRTMTET----------VNDYVR 137 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~-----~p~~~~~W~~~~~~~~~--------~~~~~~~~----------~~~~~~ 137 (168)
. + ....+.+|+.+.|.|.+.+ .|.+.+.|++++..+.. ...+.... ......
T Consensus 182 -~---~-~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (363)
T 1wio_A 182 -A---S-SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLH 256 (363)
T ss_dssp -S---E-EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCE
T ss_pred -C---C-CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceE
Confidence 1 1 3456788999999998877 77889999999887665 23332221 112348
Q ss_pred EEEccCCCCCCeeEEEEEEcC--CceeeEEEE
Q psy16859 138 LTLKRATDDENGTYFIVARNI--YGSDRAFVT 167 (168)
Q Consensus 138 l~i~~~~~~d~g~y~C~~~n~--~g~~~~~~~ 167 (168)
|.|.++..+|+|.|+|.|.|. .|.....+.
T Consensus 257 L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~ 288 (363)
T 1wio_A 257 LTLPQALPQYAGSGNLTLALEAKTGKLHQEVN 288 (363)
T ss_dssp EEESSBCGGGCEEEEEEECBTTTTCCEEEEEE
T ss_pred EEEccCCcCcCcEEEEEEEEhhhcCeEEEEEe
Confidence 999999999999999999999 887766543
No 125
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.88 E-value=3.3e-21 Score=118.09 Aligned_cols=135 Identities=11% Similarity=0.153 Sum_probs=93.3
Q ss_pred CCceEEEEECCEecCC-----------CCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEecc
Q psy16859 2 VKPEVIWLRGNTPLPK-----------SSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVS 70 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 70 (168)
|.+.|.|++++..+.. ...|+.+... . .+|.|.+++.+|+|.|.|.+.+..+ ...+.|.|..+.
T Consensus 22 ~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~-~--~sL~I~~v~~~DsG~Y~C~~~n~~~--~~~~~L~V~~~~ 96 (171)
T 1ccz_A 22 PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTV-S--GSLTIYNLTSSDEDEYEMESPNITD--TMKFFLYVLEMV 96 (171)
T ss_dssp CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTT-T--CCEEECSCCGGGCEEEEEECTTCCS--CEEEEEEEECCC
T ss_pred CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCC-C--CeEEECCCChhhCceEEEEEeCCCC--cEEEEEEEECcC
Confidence 6789999998865421 1123333212 2 3799999999999999999988776 556777875432
Q ss_pred CCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCee
Q psy16859 71 SGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGT 150 (168)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 150 (168)
. .|.+..... ...|.|.+.+.|.|.+.|++++..+...... .+.+. ...|.|.
T Consensus 97 ~-------~p~i~~~~~---------~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~---------~l~~~--~~~~~g~ 149 (171)
T 1ccz_A 97 S-------KPMIYWECS---------NATLTCEVLEGTDVELKLYQGKEHLRSLRQK---------TMSYQ--WTNLRAP 149 (171)
T ss_dssp C-------CCEEEEETT---------TTEEEEECSSCSSCEEEEEETTEEEEEESSS---------EEEEE--CSCCSSC
T ss_pred C-------CCEEEEecC---------CcEEEEEeCCCCCcEEEEEECCEECcCCcce---------EEEEe--ccCCCce
Confidence 2 233332221 1279999999899999999999877532211 23332 3678899
Q ss_pred EEEEEEcCCceeeEEEEC
Q psy16859 151 YFIVARNIYGSDRAFVTV 168 (168)
Q Consensus 151 y~C~~~n~~g~~~~~~~v 168 (168)
|+|.|.|..|..+..+.|
T Consensus 150 Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 150 FKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp EEEEEEETTEEEEEEECC
T ss_pred EEEEEEcccCcccceeEE
Confidence 999999999998876643
No 126
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.88 E-value=2.5e-21 Score=123.00 Aligned_cols=157 Identities=14% Similarity=0.181 Sum_probs=100.2
Q ss_pred CceEEEEEC--CEecC----------------CCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccc----eee
Q psy16859 3 KPEVIWLRG--NTPLP----------------KSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYG----YTE 59 (168)
Q Consensus 3 ~p~v~W~~~--~~~~~----------------~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~----~~~ 59 (168)
.+.|.|||+ +..+. ....|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+ ...
T Consensus 31 ~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~ 110 (219)
T 1c1e_H 31 NYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNEDMATYFCARGTTIVRAMDYWG 110 (219)
T ss_dssp GSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEETTTTEEEEEC
T ss_pred cceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEeccCcccceeec
Confidence 689999996 33210 01356666543 23457899999999999999999998752 112
Q ss_pred EEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcEEEecCC---
Q psy16859 60 TFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTMTETVND--- 134 (168)
Q Consensus 60 ~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~~~~~~~--- 134 (168)
....|.|.... ..+|.+...+. ...+..|+.+.|.|.+.+ .|.| .+.|++++..+...........+.
T Consensus 111 ~~~~l~V~~~~------~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~ 183 (219)
T 1c1e_H 111 QGTSLTVSSAK------TTPPSVYPLAP-GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL 183 (219)
T ss_dssp CCEEEEECCCC------CBCCEEEEECC-CSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEE
T ss_pred CceEEEEecCC------CCCCeEEEecC-ccccccCCeEEEEEEcccccCCCeEEEEEeCCcccceEecCCcccCCeEEE
Confidence 34567774321 12344433221 223568999999999998 8988 999999887542111100111111
Q ss_pred EEEEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 135 YVRLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 135 ~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
.+.|.|..... |.|.|+|.|.|..|......+
T Consensus 184 ~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~~~~ 215 (219)
T 1c1e_H 184 SSSVTVPSSPR-PSETVTCNVAHPASSTKVDKK 215 (219)
T ss_dssp EEEEEEESSST-TTSCCEEEEEEGGGTEEEEEE
T ss_pred EEEEEEecccC-CCCEEEEEEEeCCCCccEEEe
Confidence 24678854444 559999999999887665544
No 127
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.87 E-value=6.1e-21 Score=136.75 Aligned_cols=152 Identities=13% Similarity=0.197 Sum_probs=108.1
Q ss_pred ceEEEEECCEecC-------------CCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 4 PEVIWLRGNTPLP-------------KSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 4 p~v~W~~~~~~~~-------------~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
+.+.|+|++..+. ....|+.+... .++..+|.|.+++.+|+|.|+|.+.+..+.....+.|.|..
T Consensus 33 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~- 111 (585)
T 2ocw_A 33 TRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQ- 111 (585)
T ss_pred ccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcccCEEEEEEcccCCCCceEEEEEEEec-
Confidence 3899999875321 11245655542 25567899999999999999999998877776677888843
Q ss_pred cCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCC-CCeEEEeeCCEecc----C---------CCCcEEEecC--
Q psy16859 70 SSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSP-KPKVTWMKGIKDIT----T---------SSRTMTETVN-- 133 (168)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~~~W~~~~~~~~----~---------~~~~~~~~~~-- 133 (168)
+|.+...+ ....+.+|+.+.|.|.+.+.+ .+.+.|++++.... . ..+..+....
T Consensus 112 ---------~p~~~~~~-~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 181 (585)
T 2ocw_A 112 ---------GPGLLNDT-KVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTG 181 (585)
T ss_pred ---------CccccCCC-ccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCC
Confidence 33444444 567789999999999998654 56799999865321 0 1222222222
Q ss_pred -CEEEEEEccCCCCCCeeEEEEEEcCCceeeEEE
Q psy16859 134 -DYVRLTLKRATDDENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 134 -~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 166 (168)
...+|.|.++..+|+|.|+|.+.|..|.....+
T Consensus 182 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~ 215 (585)
T 2ocw_A 182 QLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNA 215 (585)
T ss_pred CcEEEEEEccCChhHCeEEEEEeccCCccccceE
Confidence 124799999999999999999999988765443
No 128
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.87 E-value=6.4e-22 Score=135.12 Aligned_cols=145 Identities=15% Similarity=0.219 Sum_probs=104.2
Q ss_pred CCCceEEEEECCEecCCC-CCceEEEecCCCEEEEEEcCCCC-CCCeEEEEEEEcccceeeE-EEEEEEEeccCCCcccC
Q psy16859 1 YVKPEVIWLRGNTPLPKS-SPRFKYIEDSNNLHTLILSGVTA-EEAGKYTCRVSNEYGYTET-FARVDVINVSSGAVKHE 77 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~-~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~ 77 (168)
+|.|++.|++++..+... ..++..... +|.|.++.. +|+|.|+|.+.|..|.... .+.|.|...+.
T Consensus 34 ~p~~~v~W~k~g~~~~~~~~~~~~~~~~-----~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~------ 102 (382)
T 1cs6_A 34 NPPATYRWKMNGTELKMGPDSRYRLVAG-----DLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQE------ 102 (382)
T ss_dssp ESCCEEEEEETTEECCCSTTSSEEEETT-----EEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECC------
T ss_pred CCCCEEEEEECCEECCcCCCccEEeeCC-----eEEEecccccccCEEEEEEEEcCCcEEEecceEEEeecccc------
Confidence 478999999999988533 346555433 799999997 9999999999998876543 46666643321
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEE-ccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRL-AGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
+...+.....+.+|+.+.|.|.+ .+.|.+.+.|++++..+................|.|.++...|.|.|+|.+.
T Consensus 103 ----~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 178 (382)
T 1cs6_A 103 ----FSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFAT 178 (382)
T ss_dssp ----CCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEE
T ss_pred ----ccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEEEEeeCcccCeeEEEEEE
Confidence 11122245678899999999995 4568889999998865432211111222233479999999999999999999
Q ss_pred cCCc
Q psy16859 157 NIYG 160 (168)
Q Consensus 157 n~~g 160 (168)
|..|
T Consensus 179 n~~g 182 (382)
T 1cs6_A 179 SHID 182 (382)
T ss_dssp EEET
T ss_pred Eccc
Confidence 9874
No 129
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.87 E-value=1.6e-22 Score=127.85 Aligned_cols=156 Identities=14% Similarity=0.130 Sum_probs=103.3
Q ss_pred CCceEEEEECC--Eec-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcc-ccee--eEEEEEE
Q psy16859 2 VKPEVIWLRGN--TPL-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNE-YGYT--ETFARVD 65 (168)
Q Consensus 2 p~p~v~W~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~-~~~~--~~~~~l~ 65 (168)
|.|.|.||+++ ..+ .....|+.+... .+..+|.|.+++.+|+|.|.|.+.|. .+.. .....|.
T Consensus 27 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~ 105 (212)
T 1nfd_E 27 PKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTS-GTTATLTISGAQPEDEAAYYCLSSYGDNNDLVFGSGTQLT 105 (212)
T ss_dssp GGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEE-TTEEEEEETTCCGGGCSEEEEEEEETTTTEEEECCCEEEE
T ss_pred CCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEee-CCEEEEEECcCCcccCEEEEEEEEcccCcccccCCceEEE
Confidence 56789999853 222 011457776655 66779999999999999999999962 2221 2234566
Q ss_pred EEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CC-CeEEEeeCCEeccCCCCcE-EEecCC----EEEE
Q psy16859 66 VINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PK-PKVTWMKGIKDITTSSRTM-TETVND----YVRL 138 (168)
Q Consensus 66 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~~~~~~~~~-~~~~~~----~~~l 138 (168)
|.... ..+|.+...+. ...+..|+.+.|.|.+.+. |. +.+.|++++..+....... .....+ .+.|
T Consensus 106 V~~~~------~~~p~v~~~~~-~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L 178 (212)
T 1nfd_E 106 VLRGP------KSSPKVTVFPP-SPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYL 178 (212)
T ss_dssp EECCC------CBCCEEECCCC-CHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBC
T ss_pred EccCC------CCCCEEEeeCC-chHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEE
Confidence 64322 13455544332 2334579999999999986 54 7999999998876432111 000011 2458
Q ss_pred EEccCCCCCCeeEEEEEEcCCceeeEE
Q psy16859 139 TLKRATDDENGTYFIVARNIYGSDRAF 165 (168)
Q Consensus 139 ~i~~~~~~d~g~y~C~~~n~~g~~~~~ 165 (168)
.|.++..+|.|.|+|.|.|..+.....
T Consensus 179 ~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 205 (212)
T 1nfd_E 179 SLTADQWKSHNRVSCQVTHEGETVEKS 205 (212)
T ss_dssp CEEHHHHHTCSCEEEEEECTTTTCCCC
T ss_pred EEchhhcCCCCeEEEEEEeCCceEEEE
Confidence 888999999999999999998765443
No 130
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.87 E-value=8.2e-21 Score=120.87 Aligned_cols=139 Identities=17% Similarity=0.167 Sum_probs=93.0
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccc-----eeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEee
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYG-----YTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVA 93 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (168)
.|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+ .......|.|...+ ..+|.+...+. ...+.
T Consensus 68 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~~-~~~~~ 140 (222)
T 1q9r_B 68 GRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAK------TTPPSVYPLAP-GSAAQ 140 (222)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSC------CBCCEEEEECC-CSCCC
T ss_pred CceEEEEECCCCeEEEEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCC------CCCCeEEEccc-ccccc
Confidence 57776643 24567999999999999999999998653 12234567774321 12334333221 12356
Q ss_pred cCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcEEEecCC---EEEEEEccCCCCCCeeEEEEEEcCCceeeEEE
Q psy16859 94 LGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTMTETVND---YVRLTLKRATDDENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 94 ~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 166 (168)
.|+.++|.|.+.|. |.| .+.|++++..+...........+. .+.|.|..+...| |.|+|.|.|..|......
T Consensus 141 ~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~ 217 (222)
T 1q9r_B 141 TNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 217 (222)
T ss_dssp CSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred CCCcEEEEEEEccEECCCCEEEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEE
Confidence 89999999999985 887 999999887653211001111111 2468898999889 999999999998766444
No 131
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.87 E-value=4.6e-22 Score=126.56 Aligned_cols=151 Identities=15% Similarity=0.188 Sum_probs=100.5
Q ss_pred eEEEEECCEecCC------------CCCceEEEec----CCCEEEEEEcCCCCCCCeEEEEEEEccc-ceeeEEEEEEEE
Q psy16859 5 EVIWLRGNTPLPK------------SSPRFKYIED----SNNLHTLILSGVTAEEAGKYTCRVSNEY-GYTETFARVDVI 67 (168)
Q Consensus 5 ~v~W~~~~~~~~~------------~~~~~~~~~~----~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~~l~v~ 67 (168)
.|.|++++..... ...|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+.. +.....+.|.|.
T Consensus 35 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~ 114 (221)
T 3eow_R 35 QLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVL 114 (221)
T ss_dssp EEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCCCCSCBEEEEEESSSCSCEEECCCCCC
T ss_pred EEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChHHCeEEEEEEEeCCCCceEEEEEEEEE
Confidence 4999998643211 1345555541 1245689999999999999999999865 555556666663
Q ss_pred eccCCCcccCCCCeEEecCCcceEeecCCeE-EEEEEEc-cCCCCeEEEeeCCEeccCCCCcEEEec---CCEEEEEEcc
Q psy16859 68 NVSSGAVKHEKPAMFLTRPDTMMSVALGEDI-SFSFRLA-GSPKPKVTWMKGIKDITTSSRTMTETV---NDYVRLTLKR 142 (168)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~l~C~~~-~~p~~~~~W~~~~~~~~~~~~~~~~~~---~~~~~l~i~~ 142 (168)
.+|.+...+.... ..|..+ .|.|.+. +.|.+.+.|++++.............. ...+.|.|..
T Consensus 115 ----------~~P~~~~~~~~~~--~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~ 182 (221)
T 3eow_R 115 ----------AKPQNTAEVQKVQ--LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVP 182 (221)
T ss_dssp ----------CCCEEEEEEECCC--CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCC
T ss_pred ----------ECCCceeecCCcc--cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeC
Confidence 2444433332222 577788 5999987 789999999986433221110000001 1236799999
Q ss_pred CCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 143 ATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 143 ~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
+..+|.|.|+|.|.|..+.....+.
T Consensus 183 ~~~~d~g~ytC~a~n~~~~~~~~~~ 207 (221)
T 3eow_R 183 SSQVDGKQVTCKVEHESFEKPQLLT 207 (221)
T ss_dssp CSCCCCCCEEEEECCSCSSSCEEEE
T ss_pred CHHHCCCeEEEEEECCCCCCCeEEE
Confidence 9999999999999999887766554
No 132
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.87 E-value=4.5e-21 Score=124.37 Aligned_cols=139 Identities=20% Similarity=0.191 Sum_probs=93.9
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccceee-EEEEEEEEeccCCCc-----ccCCCCeEEecCCcceEe
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE-TFARVDVINVSSGAV-----KHEKPAMFLTRPDTMMSV 92 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 92 (168)
.|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+... ....|.|........ ....++.+...+ ....+
T Consensus 67 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p-~~~~v 145 (253)
T 3uzq_A 67 GKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTP-ASLAV 145 (253)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEEC-SEEEE
T ss_pred CcEEEEeecCCCeEEEEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcC-CeEEE
Confidence 56766643 24577899999999999999999998654442 355677743100000 001234444445 46788
Q ss_pred ecCCeEEEEEEEccCCCC----eEEEeeC--CEecc------------CCCCcEEEecCCEEEEEEccCCCCCCeeEEEE
Q psy16859 93 ALGEDISFSFRLAGSPKP----KVTWMKG--IKDIT------------TSSRTMTETVNDYVRLTLKRATDDENGTYFIV 154 (168)
Q Consensus 93 ~~g~~~~l~C~~~~~p~~----~~~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 154 (168)
.+|+.++|.|.+.+.+.+ .+.|+++ +.... ...++.........+|.|.+++.+|+|.|+|.
T Consensus 146 ~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 225 (253)
T 3uzq_A 146 SLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQ 225 (253)
T ss_dssp CTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred eCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEE
Confidence 999999999999998876 8999983 21111 11334433444557899999999999999999
Q ss_pred EEcCC
Q psy16859 155 ARNIY 159 (168)
Q Consensus 155 ~~n~~ 159 (168)
+.|..
T Consensus 226 ~~n~~ 230 (253)
T 3uzq_A 226 RSNEV 230 (253)
T ss_dssp ECSSS
T ss_pred EccCC
Confidence 99864
No 133
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.87 E-value=1.1e-21 Score=127.22 Aligned_cols=151 Identities=18% Similarity=0.187 Sum_probs=100.8
Q ss_pred CceEEEEECC--Eec-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEEe
Q psy16859 3 KPEVIWLRGN--TPL-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVIN 68 (168)
Q Consensus 3 ~p~v~W~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~ 68 (168)
.|.|.|++++ ..+ .....|+.+... .+..+|.|.+++.+|+|.|.|.+.+..+.... ...+.|..
T Consensus 72 ~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~ 150 (254)
T 2c1o_A 72 KTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGS-GTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKR 150 (254)
T ss_dssp CBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECC
T ss_pred CCceEEEEeCCCCCceEEEEeccccCCCccceEEEecC-CCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECC
Confidence 4899999843 211 112357776655 66779999999999999999999987554322 34566632
Q ss_pred ccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCC-CeEEEeeCCEeccCCC--CcEEEecC-----CEEEEE
Q psy16859 69 VSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPK-PKVTWMKGIKDITTSS--RTMTETVN-----DYVRLT 139 (168)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~-~~~~W~~~~~~~~~~~--~~~~~~~~-----~~~~l~ 139 (168)
. ..+|.+...+... ....|..+.|.|.+.+ .|. +.+.|++++..+.... ........ ....|.
T Consensus 151 ~-------~~~P~v~~~~~~~-~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~ 222 (254)
T 2c1o_A 151 A-------DAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT 222 (254)
T ss_dssp C-------CBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEE
T ss_pred C-------CCCCeeEeecCCh-hhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEE
Confidence 1 1244444433222 2336789999999987 444 4699999998775541 00000011 135799
Q ss_pred EccCCCCCCeeEEEEEEcCCcee
Q psy16859 140 LKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 140 i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
|.++..+|.|.|+|.|.|.....
T Consensus 223 i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 223 LTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp EEHHHHHTCCEEEEEEECTTCSS
T ss_pred eccccccCCCeEEEEEEcCCCCC
Confidence 99999999999999999987653
No 134
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.87 E-value=2e-20 Score=121.10 Aligned_cols=155 Identities=15% Similarity=0.220 Sum_probs=98.9
Q ss_pred CCCceEEEEECC-----Ee--------cCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee-EEEEEEE
Q psy16859 1 YVKPEVIWLRGN-----TP--------LPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE-TFARVDV 66 (168)
Q Consensus 1 ~p~p~v~W~~~~-----~~--------~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v 66 (168)
.|.|.+.|+|+. .. ......|+..... ....+|.|.+++.+|+|.|.|.+.+..+... ....|.|
T Consensus 31 ~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V 109 (250)
T 3esu_F 31 DIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGS-GTDYSLTISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEI 109 (250)
T ss_dssp CCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred cCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCC-CCEEEEEEccCChhhCEEEEEEEeeCCCceECCCEEEEE
Confidence 377899999953 11 1122457766555 6677999999999999999999998655432 2345666
Q ss_pred EeccCCCc---------ccCCCCeEEecCCcceEeecCCeEEEEEEEccCC--CCeEEEeeC--CEecc-----------
Q psy16859 67 INVSSGAV---------KHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSP--KPKVTWMKG--IKDIT----------- 122 (168)
Q Consensus 67 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~--~~~~~----------- 122 (168)
...+.... ....++.....+ ....+.+|+.++|.|.+.+.+ .+.+.|+++ +..+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~ 188 (250)
T 3esu_F 110 RRGGGGSGGGGSGGGGSGGGGSEVQLQQS-GPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGD 188 (250)
T ss_dssp C------------------------CEEC-CCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTE
T ss_pred ECCCCcccccccccccccCcccceEEecC-CceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCc
Confidence 43210000 000122223333 356788999999999998866 778999986 32221
Q ss_pred ------CCCCcEEEec--CCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 123 ------TSSRTMTETV--NDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 123 ------~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
...++..... ....+|.|.+++.+|+|.|+|.+.+
T Consensus 189 ~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 189 TNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred cccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 0123333211 3346799999999999999999997
No 135
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.87 E-value=2.3e-21 Score=122.48 Aligned_cols=156 Identities=19% Similarity=0.166 Sum_probs=101.5
Q ss_pred CceEEEEECC--EecC---------------CCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEE
Q psy16859 3 KPEVIWLRGN--TPLP---------------KSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARV 64 (168)
Q Consensus 3 ~p~v~W~~~~--~~~~---------------~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 64 (168)
.+.|.|+|++ ..+. ....|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+.. .......|
T Consensus 31 ~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-~~~~~~~l 109 (210)
T 3d9a_H 31 SDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANWDGD-YWGQGTLV 109 (210)
T ss_dssp GSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEETTSS-CBCCCEEE
T ss_pred CCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcccCEEEEEEEecCc-ccccceEE
Confidence 4899999852 2110 02357776643 2346799999999999999999998863 11223466
Q ss_pred EEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcEEEecC---CEEEEE
Q psy16859 65 DVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTMTETVN---DYVRLT 139 (168)
Q Consensus 65 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~---~~~~l~ 139 (168)
.|.... ..+|.+...+. ...+..|+.+.|.|.+.+. |.+ .+.|++++..+...........+ ..+.|.
T Consensus 110 ~V~~~~------~~~P~v~~~~~-~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~ 182 (210)
T 3d9a_H 110 TVSAAK------TTPPSVYPLAP-GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVT 182 (210)
T ss_dssp EECCCC------CBCCEEEEECC-TTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEE
T ss_pred EeccCC------CCCCEEEEecC-CcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEE
Confidence 664311 12344433331 2335789999999999986 877 99999987654211111111111 124688
Q ss_pred EccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 140 LKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 140 i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
|.....++ |.|+|.|.|..|.......
T Consensus 183 i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 209 (210)
T 3d9a_H 183 VPSSTWPS-ETVTCNVAHPASSTKVDKK 209 (210)
T ss_dssp EEGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred EcHHHcCC-CcEEEEEEeCCCCcccccc
Confidence 88888877 9999999999998776654
No 136
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.87 E-value=1.3e-20 Score=122.34 Aligned_cols=139 Identities=18% Similarity=0.260 Sum_probs=94.3
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcc----cceeeEEEEEEEEeccCC------CcccCCCCeEEecCCc
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNE----YGYTETFARVDVINVSSG------AVKHEKPAMFLTRPDT 88 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~----~~~~~~~~~l~v~~~~~~------~~~~~~~~~~~~~~~~ 88 (168)
.|+.+..+ .....+|+|.+++.+|+|.|.|.+.+. .+.......|.|...+.. ......++.+...| .
T Consensus 68 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 146 (256)
T 3umt_A 68 GKAILTVDKSSSTAYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSP-S 146 (256)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEEC-S
T ss_pred ceEEEEEecCCCEEEEEECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCC-C
Confidence 56766543 245678999999999999999999886 222233466777431000 00001144455555 4
Q ss_pred ceEeecCCeEEEEEEEccCCCCeEEEeeC--CEecc------------CCCCcEEEecCCEEEEEEccCCCCCCeeEEEE
Q psy16859 89 MMSVALGEDISFSFRLAGSPKPKVTWMKG--IKDIT------------TSSRTMTETVNDYVRLTLKRATDDENGTYFIV 154 (168)
Q Consensus 89 ~~~~~~g~~~~l~C~~~~~p~~~~~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 154 (168)
.+.+.+|+.++|.|.+.+.+.+.+.|++. +..+. ...++.........+|.|.+++.+|+|.|+|.
T Consensus 147 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 226 (256)
T 3umt_A 147 SLSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCL 226 (256)
T ss_dssp EEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEE
T ss_pred eEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEE
Confidence 67889999999999999988889999983 21111 12344444445567899999999999999999
Q ss_pred EEcCC
Q psy16859 155 ARNIY 159 (168)
Q Consensus 155 ~~n~~ 159 (168)
+.|..
T Consensus 227 ~~~~~ 231 (256)
T 3umt_A 227 QYASS 231 (256)
T ss_dssp ECSSS
T ss_pred EeeCC
Confidence 99864
No 137
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.87 E-value=7.7e-21 Score=134.70 Aligned_cols=154 Identities=16% Similarity=0.173 Sum_probs=101.2
Q ss_pred ceEEEEECCEecCCCCCceE-EEecCCC----EEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCC
Q psy16859 4 PEVIWLRGNTPLPKSSPRFK-YIEDSNN----LHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEK 78 (168)
Q Consensus 4 p~v~W~~~~~~~~~~~~~~~-~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~ 78 (168)
++|.|+|++..+... .+.. .....++ ...|.|.+++.+|+|.|+|.+.|..+.....+.+.+.... ..
T Consensus 146 ~~v~W~k~g~~l~~~-~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~------~~ 218 (523)
T 2rcj_C 146 VTVAWKADGSPVKAG-VETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSAS------TK 218 (523)
T ss_pred eEEEEecCCCCCCCc-eEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCC------Cc
Confidence 399999999887432 1211 1111122 2369999999999999999999987766555444332111 22
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcEEEecCC----EEEEEEccCCCCCCeeEE
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTMTETVND----YVRLTLKRATDDENGTYF 152 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~ 152 (168)
+|.+...+ ....+..|+.+.|.|.+.|. |.+ .+.|++++..+............+ .+.|.|..+..+| |.|+
T Consensus 219 ~P~v~~~~-~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~ 296 (523)
T 2rcj_C 219 GPSVFPLA-PSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYI 296 (523)
T ss_pred CCEEEecC-CCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEE
Confidence 34433222 12346789999999999886 777 899999987653211111111111 2479999999999 9999
Q ss_pred EEEEcCCceeeEEE
Q psy16859 153 IVARNIYGSDRAFV 166 (168)
Q Consensus 153 C~~~n~~g~~~~~~ 166 (168)
|.|.|..|.....+
T Consensus 297 C~a~n~~g~~~~~~ 310 (523)
T 2rcj_C 297 CNVNHKPSNTKVDK 310 (523)
T ss_pred EEEEeCCCCcceEE
Confidence 99999999765443
No 138
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.87 E-value=3.3e-22 Score=133.35 Aligned_cols=143 Identities=17% Similarity=0.296 Sum_probs=104.0
Q ss_pred CceEEEEECCEecC---CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 3 KPEVIWLRGNTPLP---KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 3 ~p~v~W~~~~~~~~---~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
.|.+.|+|++..+. ....++..... +|.|.+++.+|+|.|+|.+.|..+.....+.+.+... +
T Consensus 35 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~-----~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~v~~~---------~ 100 (315)
T 1itb_B 35 KGTITWYKDDSKTPVSTEQASRIHQHKE-----KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVEN---------E 100 (315)
T ss_dssp SSCCCEECTTSCSCSCCCTTSSSEECSS-----BEECTTCCGGGCSCCEECCCSSSCCCCEECCCEEECC---------C
T ss_pred CceEEEEeCCCcCccccccCCcEeccCC-----eEEECCCChhhCEEEEEEEeCCceEEEEEEEEEEeCC---------C
Confidence 78999999986542 22344443322 7999999999999999999998877665555555321 2
Q ss_pred CeEEecC--CcceEeecCCeEEEEEEE------ccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeE
Q psy16859 80 AMFLTRP--DTMMSVALGEDISFSFRL------AGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTY 151 (168)
Q Consensus 80 ~~~~~~~--~~~~~~~~g~~~~l~C~~------~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 151 (168)
|.+...+ .....+..|+.+.|.|.+ .+.|.+.+.|++++..+......... .. ..|.|.++..+|+|.|
T Consensus 101 p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~-~~--~~L~i~~v~~~d~G~Y 177 (315)
T 1itb_B 101 PNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSG-VK--DRLIVMNVAEKHRGNY 177 (315)
T ss_dssp TTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEE-ET--TEEEESSCCGGGCEEE
T ss_pred CCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEee-cC--ceEEEEeceehhCcEE
Confidence 2221111 123467789999999998 78899999999999988654322222 22 2799999999999999
Q ss_pred EEEEE-cCCcee
Q psy16859 152 FIVAR-NIYGSD 162 (168)
Q Consensus 152 ~C~~~-n~~g~~ 162 (168)
+|.+. |..|..
T Consensus 178 ~C~a~~n~~g~~ 189 (315)
T 1itb_B 178 TCHASYTYLGKQ 189 (315)
T ss_dssp EEEEEEEETTEE
T ss_pred EEEEEcCCCCcE
Confidence 99999 788876
No 139
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.87 E-value=3.9e-20 Score=118.96 Aligned_cols=149 Identities=18% Similarity=0.278 Sum_probs=101.1
Q ss_pred CceEEEEECC--Ee---c--------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccce-eeEEEEEEEEe
Q psy16859 3 KPEVIWLRGN--TP---L--------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGY-TETFARVDVIN 68 (168)
Q Consensus 3 ~p~v~W~~~~--~~---~--------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~ 68 (168)
.|.|.|||++ .. + .....|+.+... ++..+|.|.+++.+|+|.|.|.+.+..+. ......|.|..
T Consensus 34 ~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 112 (240)
T 1moe_A 34 VGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGS-RTDFTLIIDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKG 112 (240)
T ss_dssp EECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECC
T ss_pred CceEEEEEECCCCCceEEEEEecccCcCCCccEEEEec-CCeEEEEEcCCChhhCEEEEEEEccCCceeecCCEEEEEec
Confidence 7899999952 11 1 012457776655 66779999999999999999999987554 23345677754
Q ss_pred ccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCC--CeEEEeeC--CEecc-----------------CCCCc
Q psy16859 69 VSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPK--PKVTWMKG--IKDIT-----------------TSSRT 127 (168)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~--~~~~~-----------------~~~~~ 127 (168)
.+. ...++.....+ ....+.+|+.++|.|.+.+.|. +.+.|+++ +..+. ...++
T Consensus 113 ~~~----~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 187 (240)
T 1moe_A 113 GGS----GGGGEVQLQQS-GAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKA 187 (240)
T ss_dssp CSC----CCCCCCEEEEC-CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTE
T ss_pred CCC----CCCceEEEeCC-CceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccE
Confidence 321 01123333334 4567889999999999998773 58999984 22110 11233
Q ss_pred EEEec--CCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 128 MTETV--NDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 128 ~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
..... ....+|.|.+++.+|+|.|+|.|.+
T Consensus 188 ~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 188 TITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp EEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 33221 3446899999999999999999984
No 140
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.87 E-value=3.5e-20 Score=120.43 Aligned_cols=157 Identities=18% Similarity=0.269 Sum_probs=101.7
Q ss_pred CCceEEEEECC--E---ec------------CCCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEccc----ceee
Q psy16859 2 VKPEVIWLRGN--T---PL------------PKSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEY----GYTE 59 (168)
Q Consensus 2 p~p~v~W~~~~--~---~~------------~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~----~~~~ 59 (168)
|.+.+.||+.. . .+ .....|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+.. ....
T Consensus 38 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~ 117 (257)
T 3gkz_A 38 TSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSEDTATYYCSYFDSDDYAMEYWG 117 (257)
T ss_dssp SSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTCTTCEEEC
T ss_pred cceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhhCEEEEEEEecCCCcceeEEc
Confidence 57899999932 1 11 012356766643 2456789999999999999999999862 1222
Q ss_pred EEEEEEEEeccCC----CcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCC-eEEEeeC--CEecc----------
Q psy16859 60 TFARVDVINVSSG----AVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKP-KVTWMKG--IKDIT---------- 122 (168)
Q Consensus 60 ~~~~l~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~--~~~~~---------- 122 (168)
....|.|...... ......++.+...+ ....+.+|+.++|.|.+.+.+.+ .+.|++. +..+.
T Consensus 118 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~ 196 (257)
T 3gkz_A 118 QGTSVTVSGGGGSGGGGSGGGGSQIVLTQSP-AIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLA 196 (257)
T ss_dssp CCEEEEEC---------CTTCCCCCCEECSC-SEEEECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEEC
T ss_pred CCEEEeecCchhhcccccCCCccceEEEcCC-ceEEEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccC
Confidence 3456777432100 00001123444444 56788999999999999998877 8999973 22111
Q ss_pred --CCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 123 --TSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 123 --~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
...++.........+|.|.+++.+|+|.|+|.+.+..
T Consensus 197 ~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 235 (257)
T 3gkz_A 197 SGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSF 235 (257)
T ss_dssp TTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred CCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCC
Confidence 0133433334455689999999999999999998843
No 141
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.87 E-value=3.8e-22 Score=125.58 Aligned_cols=142 Identities=14% Similarity=0.182 Sum_probs=90.2
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEe------ccCC---
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVIN------VSSG--- 72 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~------~~~~--- 72 (168)
|.|.+.|+|++..+... . ....+|.|.+++.+|+|.|+|.+.+.. . ..+.|.+.. ....
T Consensus 28 p~~~i~W~k~g~~l~~~------~---~~~~~L~i~~v~~~DsG~Y~C~~~~~~-s--~~~~v~v~~~~~~~~~~~~~~~ 95 (204)
T 1sy6_A 28 EAKNITWFKDGKMIGFL------T---EDKKKWNLGSNAKDPRGMYQCKGSQNK-S--KPLQVYYRMGSADDAKKDAAKK 95 (204)
T ss_dssp CSSEEEEEETTEEEEEE------E---SSCCCEEEEEGGGCCEEEEEEESSSSC-C--CCEEEEEEC-------------
T ss_pred CCCEEEEEECCEECCCC------C---CCCCeEEeCCCCcCCCEEEEEEecCCC-C--eeEEEEEEEecccccccccccc
Confidence 67899999999887321 0 111369999999999999999965422 1 123444430 0000
Q ss_pred --------Cc---c-cCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCC-CcEEEecCCEEEEE
Q psy16859 73 --------AV---K-HEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSS-RTMTETVNDYVRLT 139 (168)
Q Consensus 73 --------~~---~-~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~-~~~~~~~~~~~~l~ 139 (168)
.. . ...++.+...+ .....+|+.+.|.|. +.|.+.+.|++++..+.... ....... ...|.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~p--~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~--~~~L~ 169 (204)
T 1sy6_A 96 DDAKKDDAKKDGSDGNEEMGGITQTP--YKVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSD--EDHLS 169 (204)
T ss_dssp -----------------------CCC--CEEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEE--TTEEE
T ss_pred ccccccccccccccccccccceecCC--ceeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecC--CCEEE
Confidence 00 0 00022222222 122238999999998 77888999999998875432 1112212 23799
Q ss_pred EccC-CCCCCeeEEEEEEcCCce
Q psy16859 140 LKRA-TDDENGTYFIVARNIYGS 161 (168)
Q Consensus 140 i~~~-~~~d~g~y~C~~~n~~g~ 161 (168)
|.++ ..+|+|.|+|.|.|..|.
T Consensus 170 I~~v~~~~D~G~Y~C~A~N~~g~ 192 (204)
T 1sy6_A 170 LKEFSELEQSGYYVCYPRGSKPE 192 (204)
T ss_dssp ETTCCHHHHCEEEEEEETTSCGG
T ss_pred EeeCCccccCEEEEEEeccCCCC
Confidence 9999 999999999999999996
No 142
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.87 E-value=1.1e-20 Score=116.67 Aligned_cols=134 Identities=13% Similarity=0.188 Sum_probs=91.0
Q ss_pred CCceEEEEEC-CEecC-------------CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 2 VKPEVIWLRG-NTPLP-------------KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 2 p~p~v~W~~~-~~~~~-------------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
+.+.|.|+++ +..+. ....|+.+.. ...+|+|.+++.+|+|.|+|.+.+.. .....+.|.|.
T Consensus 28 ~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~---~~~sL~I~~v~~~D~G~Y~C~v~~~~-~~~~~~~L~V~ 103 (180)
T 2dru_A 28 SYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDK---TNGALRIYNVSKEDRGDYYMRMLHET-EDQWKITMEVY 103 (180)
T ss_dssp SCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECT---TTCCEEECSCCGGGCEEEEEEEESSS-EEEEEEEEEEE
T ss_pred ceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeC---CCccEEEcCCCHHHCeEEEEEEEcCC-eEEEEEEEEEE
Confidence 3689999994 32221 1114555421 22479999999999999999998765 44556777775
Q ss_pred eccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEE-ccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCC
Q psy16859 68 NVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRL-AGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDD 146 (168)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 146 (168)
.+.. .|.+.. .+..+.|.|.+ .+ |.+.+.|++++..+.. ... .+|.+.. .+
T Consensus 104 ~~~~-------~P~i~~---------~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~-------~~~--~~l~~~~--~~ 155 (180)
T 2dru_A 104 EMVS-------KPMIYW---------ECSNATLTCEVLEG-TDVELKLYQGKEHLRS-------LRQ--KTMSYQW--TN 155 (180)
T ss_dssp CCCC-------CCEEEE---------EGGGTEEEEECSSC-TTCEEEEEETTEEEEE-------ESS--SEEEEEC--SC
T ss_pred CCCC-------CCEEEe---------cCCCEEEEEEeCCC-CCCEEEEEECCeECcC-------CCC--CEEEEEE--hh
Confidence 4321 222221 33569999999 55 9999999999987651 111 2455533 77
Q ss_pred CCeeEEEEEEcCCceeeEEEE
Q psy16859 147 ENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 147 d~g~y~C~~~n~~g~~~~~~~ 167 (168)
|+|.|+|.|.|..|.......
T Consensus 156 d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 156 LRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp CSSCEEEEEEETTEEEEEEEC
T ss_pred cCccEEEEEecCcCcccccee
Confidence 899999999999998876553
No 143
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.86 E-value=1e-23 Score=155.12 Aligned_cols=156 Identities=15% Similarity=0.336 Sum_probs=0.0
Q ss_pred CCCceEEEEECCEecCCCC-CceE-----------------EEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE--
Q psy16859 1 YVKPEVIWLRGNTPLPKSS-PRFK-----------------YIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-- 60 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~-~~~~-----------------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-- 60 (168)
+|.|++.|++++..+.... .+.. +........+|.|.+++.+|+|.|+|.+.|..+....
T Consensus 576 ~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~ 655 (772)
T 3v2a_R 576 STFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCV 655 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEE
Confidence 4788999999887652211 1110 0011123446999999999999999999996544322
Q ss_pred EEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEE
Q psy16859 61 FARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTL 140 (168)
Q Consensus 61 ~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i 140 (168)
...+.|.. ..+|.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+....+.... ....+|.|
T Consensus 656 ~~~l~v~~--------~~~P~~~~~~-~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~--~~~~~L~I 724 (772)
T 3v2a_R 656 VRQLTVLE--------RVAPTITGNL-ENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK--DGNRNLTI 724 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEeecccc--------cCCCEeecCC-CceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEc--CCCcEEEE
Confidence 34444421 2344555444 4567889999999999999999999999999888765443322 22358999
Q ss_pred ccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 141 KRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 141 ~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
.++..+|+|.|+|.|.|..|.....+.
T Consensus 725 ~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 751 (772)
T 3v2a_R 725 RRVRKEDEGLYTCQACSVLGCAKVEAF 751 (772)
T ss_dssp ---------------------------
T ss_pred CcCCHHHCEEEEEEEEeCCcceeEEEE
Confidence 999999999999999999998876543
No 144
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.86 E-value=3.9e-20 Score=121.45 Aligned_cols=155 Identities=16% Similarity=0.222 Sum_probs=100.5
Q ss_pred CCceEEEEECCE-----ecC--------CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee-eEEEEEEEE
Q psy16859 2 VKPEVIWLRGNT-----PLP--------KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT-ETFARVDVI 67 (168)
Q Consensus 2 p~p~v~W~~~~~-----~~~--------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~ 67 (168)
|.|.|.||+++. .+. ....|+.+... ++..+|+|.+++.+|+|.|.|.+.+..+.. .....|.|.
T Consensus 40 p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~ 118 (276)
T 3auv_A 40 VSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGS-GTDFTLTISSLQPEDFATYYCQQHYTTPPTFGCGTKVEIK 118 (276)
T ss_dssp CTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSSSCCCCCCEEEEC-
T ss_pred CCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEecc-CCeEEEEEccCChhhCEEEEEEEecCCcccccCCEEEEEe
Confidence 678999999541 110 12457776655 667799999999999999999999875432 223566664
Q ss_pred eccCCC---cc-cCCCCeEEecCCcceEeecCCeEEEEEEEccCC--CCeEEEeeCC--Eec-----------------c
Q psy16859 68 NVSSGA---VK-HEKPAMFLTRPDTMMSVALGEDISFSFRLAGSP--KPKVTWMKGI--KDI-----------------T 122 (168)
Q Consensus 68 ~~~~~~---~~-~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~~--~~~-----------------~ 122 (168)
..+... .. ...|+.....+ ....+.+|+.++|.|.+.+.+ .+.+.|++++ ... .
T Consensus 119 ~~~~~~~~~~~~~~~p~~~~~~p-~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~ 197 (276)
T 3auv_A 119 GGGGGSIEGRSGGGGSEVQLVES-GGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADS 197 (276)
T ss_dssp ----------------CCEEEEE-CCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTT
T ss_pred cCCCccccccccccCcceEEECC-CceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccc
Confidence 322100 00 00122333334 457788999999999999876 5889999853 111 0
Q ss_pred CCCCcEEEec--CCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 123 TSSRTMTETV--NDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 123 ~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
...++..... ....+|.|.+++.+|+|.|+|.+.|.
T Consensus 198 ~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 198 VKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp TTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred cCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 1223333322 23468999999999999999999997
No 145
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.86 E-value=3e-21 Score=124.79 Aligned_cols=120 Identities=20% Similarity=0.240 Sum_probs=80.4
Q ss_pred EEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCC
Q psy16859 31 LHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPK 109 (168)
Q Consensus 31 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~ 109 (168)
..+|.|.+++.+|+|.|+|.+.+..+.....+.|.|.. +|.+...+. .....|..+.|.|.+.+ .|.
T Consensus 81 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~----------~P~v~~~~~--~~~~~~~~~~L~C~~~g~~P~ 148 (248)
T 3pv7_A 81 DASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVA----------SPASRLLLD--QVGMKENEDKYMCESSGFYPE 148 (248)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEB----------CCEEEEECC----------CEEEEEEEEEBSS
T ss_pred cEEEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEec----------CCceEEecC--CccccCCCcEEEEEEccEECC
Confidence 45699999999999999999999877777777888853 444444442 23446777889999998 788
Q ss_pred C-eEEEeeCCEeccCCC----C---cEEEec-CC----EEEEEEccCCCCCCeeEEEEEEcCCcee
Q psy16859 110 P-KVTWMKGIKDITTSS----R---TMTETV-ND----YVRLTLKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 110 ~-~~~W~~~~~~~~~~~----~---~~~~~~-~~----~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
+ .+.|++++..+.... . ...... .. ...|.+.....+|.|.|+|.|.|..+..
T Consensus 149 pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~ 214 (248)
T 3pv7_A 149 AINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHT 214 (248)
T ss_dssp CCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSS
T ss_pred CeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCC
Confidence 8 999999885433210 0 001111 11 2468888888999999999999998863
No 146
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.86 E-value=8.7e-21 Score=131.35 Aligned_cols=143 Identities=14% Similarity=0.178 Sum_probs=89.2
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+|.|.+.|++++..+.. ...+. .......+|.|.+++.+|+|.|+|.+.|..|.....+.|.|.. +|
T Consensus 75 ~P~p~i~W~~~~~~l~~-~~~~~--~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~----------~p 141 (423)
T 3qs7_E 75 PGNISCLWVFKHSSLNC-QPHFD--LQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRN----------TL 141 (423)
T ss_dssp CSSCEEEEEETTEEECC-CCBC-------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-------------
T ss_pred CCCCeEEEEECCCccCc-cceec--cccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEec----------Cc
Confidence 68999999999987732 11221 1113345799999999999999999999988887778888842 22
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEcc-CCCCCCeeEEEEEEcCC
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKR-ATDDENGTYFIVARNIY 159 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~n~~ 159 (168)
.+... .......|..+.|.|.+.|.|.|.+.|++++..+...... .... ...... ....|+|.|+|.|.|..
T Consensus 142 ~~~~~--~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~---~~~~--~~~~~~~l~~~d~G~Y~C~A~N~~ 214 (423)
T 3qs7_E 142 LYTLR--RPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEE---SPAV--VKKEEKVLHELFGTDIRCCARNEL 214 (423)
T ss_dssp --CEE--EEEEEECSSSSCEEEEEEESSCCEEEEEEC----------------C--EEECCSEECCCCSSCEEEEEECSS
T ss_pred ccccc--CCcEeccCCceEEEEEEeeecCCeEEEEECCCCCcccccc---cccc--ccccceEEecccCeEEEEEEEcCC
Confidence 22111 1223456778889999999999999999987644221100 0000 011111 15788999999999999
Q ss_pred ceee
Q psy16859 160 GSDR 163 (168)
Q Consensus 160 g~~~ 163 (168)
|...
T Consensus 215 G~~~ 218 (423)
T 3qs7_E 215 GREC 218 (423)
T ss_dssp CEEE
T ss_pred CCcc
Confidence 9764
No 147
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.86 E-value=2.8e-21 Score=131.31 Aligned_cols=124 Identities=15% Similarity=0.096 Sum_probs=97.0
Q ss_pred CCCceEEEEECCEecCCC-------CCceEEEec---------CCCEEEEEEcCCCCCCCeEEEEEEEcc--cceeeEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKS-------SPRFKYIED---------SNNLHTLILSGVTAEEAGKYTCRVSNE--YGYTETFA 62 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~-------~~~~~~~~~---------~~~~~~l~i~~~~~~d~G~Y~C~~~~~--~~~~~~~~ 62 (168)
+|.|.+.|++++..+... ..++.+... .++..+|.|.+++.+|+|.|+|.+.|. .|.....+
T Consensus 208 ~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~ 287 (363)
T 1wio_A 208 TGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEV 287 (363)
T ss_dssp CEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEE
T ss_pred CCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEE
Confidence 478999999999887542 445554321 133458999999999999999999999 88777777
Q ss_pred EEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCe--EEEeeCCEeccCCCCcEEEecCCEEEEEE
Q psy16859 63 RVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPK--VTWMKGIKDITTSSRTMTETVNDYVRLTL 140 (168)
Q Consensus 63 ~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~--~~W~~~~~~~~~~~~~~~~~~~~~~~l~i 140 (168)
.|.|.. ..|..+.|.|.+.+.|.+. +.|++++..+.. ...|.|
T Consensus 288 ~l~V~~------------------------v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~-----------~~~l~i 332 (363)
T 1wio_A 288 NLVVMR------------------------ATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKV-----------SKREKA 332 (363)
T ss_dssp EEEEEE------------------------ECCCSSSEEEEEESSCCTTCCEEEECSSSSCSE-----------EESSSE
T ss_pred eEEEEE------------------------ecCCCeeEEEEEccccCCCccEEEEeCCCceee-----------eeeeee
Confidence 777731 1178899999999998888 999999876653 124667
Q ss_pred ccCCCCCCeeEEEEEEcCC
Q psy16859 141 KRATDDENGTYFIVARNIY 159 (168)
Q Consensus 141 ~~~~~~d~g~y~C~~~n~~ 159 (168)
.++..+|+|.|+|.|.|..
T Consensus 333 ~~v~~~d~G~Y~C~a~~~~ 351 (363)
T 1wio_A 333 VWVLNPEAGMWQCLLSDSG 351 (363)
T ss_dssp EEESSCCSEEEEEEECSSS
T ss_pred eeeccccceeEEEEEecCC
Confidence 8889999999999999753
No 148
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.86 E-value=2.4e-21 Score=125.60 Aligned_cols=150 Identities=17% Similarity=0.169 Sum_probs=99.9
Q ss_pred CceEEEEECC--Eec-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee-EEEEEEEEe
Q psy16859 3 KPEVIWLRGN--TPL-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE-TFARVDVIN 68 (168)
Q Consensus 3 ~p~v~W~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~ 68 (168)
.+.|.|||++ ..+ .....|+..... ++..+|.|.+++.+|+|.|.|.+.+..+... ....|.|..
T Consensus 68 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 146 (252)
T 3bkj_L 68 HTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGS-GTDFTLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKR 146 (252)
T ss_dssp CBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECC
T ss_pred CCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEcc-CCEEEEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeC
Confidence 5899999954 111 112357776655 6677999999999999999999988755332 234566632
Q ss_pred ccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcEE--E-ecC-C---EEEEE
Q psy16859 69 VSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTMT--E-TVN-D---YVRLT 139 (168)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~~--~-~~~-~---~~~l~ 139 (168)
. ..+|.+...+... ....|+.++|.|.+.+ .|.+ .+.|++++..+........ . ... . ...|.
T Consensus 147 ~-------~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~ 218 (252)
T 3bkj_L 147 A-------DAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT 218 (252)
T ss_dssp C-------CBCCEEEEECCCH-HHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEE
T ss_pred C-------CcCcEEEEeCCCh-hhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEE
Confidence 1 1244444433222 2347889999999988 4543 7999999987654310000 0 011 1 24688
Q ss_pred EccCCCCCCeeEEEEEEcCCce
Q psy16859 140 LKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 140 i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
|..+..+|.|.|+|.|.|....
T Consensus 219 i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 219 LTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp EEHHHHHHCCEEEEEEECTTCS
T ss_pred EcchhccCCCeEEEEEEeCCCC
Confidence 9999999999999999998765
No 149
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.86 E-value=4e-20 Score=119.24 Aligned_cols=160 Identities=16% Similarity=0.220 Sum_probs=100.3
Q ss_pred CCceEEEEECC--Ee---c--------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee-EEEEEEEE
Q psy16859 2 VKPEVIWLRGN--TP---L--------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE-TFARVDVI 67 (168)
Q Consensus 2 p~p~v~W~~~~--~~---~--------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~ 67 (168)
|.|.+.||++. .. + .....|+.+... ....+|.|.+++.+|+|.|.|.+.+..+... ....|.|.
T Consensus 29 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~ 107 (242)
T 2znx_A 29 IGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGS-GTDFTLSINSVETEDFGMYFCQQSNSXPYTFGGGTKLEIT 107 (242)
T ss_dssp CTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecC-CCEEEEEECCCChHHCEEEEEeEecCCceEECCCEEEEEc
Confidence 67899999953 11 1 012457776654 5667899999999999999999998754322 24566764
Q ss_pred eccCCCc---ccCCCCeEEecCCcceEeecCCeEEEEEEEccCC--CCeEEEeeC--CEecc----------------CC
Q psy16859 68 NVSSGAV---KHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSP--KPKVTWMKG--IKDIT----------------TS 124 (168)
Q Consensus 68 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~--~~~~~----------------~~ 124 (168)
.++.... ....++.....+ ....+.+|+.++|.|.+.+.+ .+.+.|+++ +..+. ..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~ 186 (242)
T 2znx_A 108 GGGGSGGGGSGGGGSDIQLQES-GPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLK 186 (242)
T ss_dssp ---------------CCEEEEE-CCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGT
T ss_pred CCCCCCcccccccccceeeecC-CcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCcccc
Confidence 3221000 000112222223 234588999999999999876 478999984 22110 12
Q ss_pred CCcEEEe--cCCEEEEEEccCCCCCCeeEEEEEEcC--Cceee
Q psy16859 125 SRTMTET--VNDYVRLTLKRATDDENGTYFIVARNI--YGSDR 163 (168)
Q Consensus 125 ~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n~--~g~~~ 163 (168)
.++.... .....+|.|.+++.+|+|.|+|.+.|. +|...
T Consensus 187 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~fG~gt 229 (242)
T 2znx_A 187 SRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDGDYXGQGT 229 (242)
T ss_dssp TCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTSSCBCCCE
T ss_pred CcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCCcccCCCe
Confidence 2333322 234568999999999999999999984 45444
No 150
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.86 E-value=2.2e-20 Score=125.25 Aligned_cols=150 Identities=15% Similarity=0.228 Sum_probs=100.5
Q ss_pred CCceEEEEECCEecC----C----CCCceEEEec----CCCEEEEEEcCCCCCCCeEEEEEEEccccee-----eEEEEE
Q psy16859 2 VKPEVIWLRGNTPLP----K----SSPRFKYIED----SNNLHTLILSGVTAEEAGKYTCRVSNEYGYT-----ETFARV 64 (168)
Q Consensus 2 p~p~v~W~~~~~~~~----~----~~~~~~~~~~----~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-----~~~~~l 64 (168)
|.|.|.|++++.++. . ...|+..... .....+|.|.+++.+|+|.|+|.+.|..+.. ...+.|
T Consensus 32 p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l 111 (327)
T 2wng_A 32 PVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTEL 111 (327)
T ss_dssp SCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEE
T ss_pred CCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEE
Confidence 788999999875421 0 1124443321 0334579999999999999999999875531 124577
Q ss_pred EEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCC--eEEEeeCCEeccCCCCcEEEe-c-CC---EEE
Q psy16859 65 DVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKP--KVTWMKGIKDITTSSRTMTET-V-ND---YVR 137 (168)
Q Consensus 65 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~~~~~~~~~~~~-~-~~---~~~ 137 (168)
.|...+. +|.+. .+ ...+..|+.+.|.|.+.+.|++ .+.|++++..+.......... . .. ...
T Consensus 112 ~V~~~p~-------~p~i~-~~--~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~ 181 (327)
T 2wng_A 112 SVRAKPS-------APVVS-GP--AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHST 181 (327)
T ss_dssp EEEBCCC-------CCEEE-CC--SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEE
T ss_pred EEEecCC-------Cceee-cc--ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEEE
Confidence 7764432 33333 33 2457889999999999987765 899999998876433211110 0 11 135
Q ss_pred EEEccCCCCCCeeEEEEEEcCCce
Q psy16859 138 LTLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 138 l~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
|.|.....+|.|.|+|.|.|..|.
T Consensus 182 L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 182 AKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp EEEECCTTGGGCEEEEEEECTTSC
T ss_pred EEEechhcCcCceEEEEEeccccC
Confidence 777777777789999999998775
No 151
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.86 E-value=9.8e-22 Score=125.98 Aligned_cols=154 Identities=14% Similarity=0.144 Sum_probs=100.5
Q ss_pred eEEEEECC--Eec-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccce---eeEEEEEEEEe
Q psy16859 5 EVIWLRGN--TPL-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGY---TETFARVDVIN 68 (168)
Q Consensus 5 ~v~W~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~ 68 (168)
.|.||+++ ..+ .....|+..... .+..+|.|.+++.+|+|.|.|.+.+..+. ......|.|..
T Consensus 52 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 130 (234)
T 2j6e_L 52 YVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKS-GTSASLAISGLRSEDEADYYCATWDDSLSAVIFGGGTKLTVLG 130 (234)
T ss_dssp CCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEE-TTEEEEEEESCCSTTCSEEEEEEEETTTTEEEECCCBCCCBCC
T ss_pred eEEEEEecCCCCcEEEEECccccCCCccccEEEEec-CCeEEEEECCCCHHHCEEEEEEEEcCCcceeEecCCEEEEEec
Confidence 79999963 211 012357766554 56679999999999999999999987662 11234455522
Q ss_pred ccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCC-C-CeEEEeeCCEeccCCCCcE--EEecC----CEEEEEE
Q psy16859 69 VSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSP-K-PKVTWMKGIKDITTSSRTM--TETVN----DYVRLTL 140 (168)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~-~~~~W~~~~~~~~~~~~~~--~~~~~----~~~~l~i 140 (168)
.+ ..+|.+...+... ....|+.++|.|.+.+.+ . +.+.|++++..+....... ..... ..+.|.|
T Consensus 131 ~~------~~~p~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i 203 (234)
T 2j6e_L 131 QP------KAAPSVTLFPPSS-EELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSL 203 (234)
T ss_dssp CC------CCCCCCCEECCCH-HHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECC
T ss_pred CC------CCCCcccccCCCh-hHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEE
Confidence 11 1233333322222 233588999999998854 3 3899999998875431100 00011 1257889
Q ss_pred ccCCCCCCeeEEEEEEcCCceeeEEE
Q psy16859 141 KRATDDENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 141 ~~~~~~d~g~y~C~~~n~~g~~~~~~ 166 (168)
..+..+|.|.|+|.|.|..+.....+
T Consensus 204 ~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 204 TPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp CGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred CHHHcCCCCeEEEEEEeCCCceEEec
Confidence 99999999999999999988776655
No 152
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.86 E-value=5.8e-21 Score=131.11 Aligned_cols=157 Identities=22% Similarity=0.374 Sum_probs=108.9
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCC-CeEEEEEEEcccceeeE---EEEEEEEeccCCCccc
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEE-AGKYTCRVSNEYGYTET---FARVDVINVSSGAVKH 76 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~~~~---~~~l~v~~~~~~~~~~ 76 (168)
+|.|.+.|++++........++.... .+ +|.|.+++.+| +|.|+|.+.|..+.... .+.+.|..... . .
T Consensus 144 ~p~~~v~W~~~~~~~~~~~~~~~~~~--~~--~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~--~-~ 216 (404)
T 3p3y_A 144 LPSPVIFWMSSSMEPITQDKRVSQGH--NG--DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRG--V-A 216 (404)
T ss_dssp SSCCEEEEECTTSCBCCCCSSEEECT--TS--CEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSC--C-C
T ss_pred CCCCeEEEeCCCccccCCCCcEEEcC--CC--cEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCC--c-c
Confidence 48899999998854434444544332 22 69999999999 59999999988765322 24455543211 0 0
Q ss_pred CCCCeEEecC--CcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEE
Q psy16859 77 EKPAMFLTRP--DTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIV 154 (168)
Q Consensus 77 ~~~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 154 (168)
..+|.+.... .....+..|+.+.|.|.+.+.|.+.+.|++++..+..... ... .....|.|.++..+|+|.|+|.
T Consensus 217 ~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~-~~~--~~~~~L~i~~~~~~d~G~Y~C~ 293 (404)
T 3p3y_A 217 ERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKA-KFE--NFNKALRITNVSEEDSGEYFCL 293 (404)
T ss_dssp CCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTE-EEE--GGGTEEEESSCCGGGCEEEEEE
T ss_pred ccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcc-ccc--ccCceEEEccCCHhHCEEEEEE
Confidence 1122222211 1245688999999999999999999999999987765432 111 1224799999999999999999
Q ss_pred EEcCCceeeEEEE
Q psy16859 155 ARNIYGSDRAFVT 167 (168)
Q Consensus 155 ~~n~~g~~~~~~~ 167 (168)
|.|..|.....+.
T Consensus 294 a~n~~g~~~~~~~ 306 (404)
T 3p3y_A 294 ASNKMGSIRHTIS 306 (404)
T ss_dssp EECSSCEEEEEEE
T ss_pred EEeCCCcEEEEEE
Confidence 9999998776553
No 153
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.86 E-value=3.5e-20 Score=120.42 Aligned_cols=159 Identities=18% Similarity=0.224 Sum_probs=100.2
Q ss_pred CCceEEEEECC--Ee---cC---------CCCCceEEEe-cCCCEEEEEEcCCCCCCCeEEEEEEEcccce----eeEEE
Q psy16859 2 VKPEVIWLRGN--TP---LP---------KSSPRFKYIE-DSNNLHTLILSGVTAEEAGKYTCRVSNEYGY----TETFA 62 (168)
Q Consensus 2 p~p~v~W~~~~--~~---~~---------~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~----~~~~~ 62 (168)
|.|.+.||+.. .. +. ....|+.+.. ......+|.|.+++.+|+|.|.|.+.+..+. .....
T Consensus 31 ~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~ 110 (256)
T 3tf7_C 31 ATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSAKGTGSKLSFGKGA 110 (256)
T ss_dssp SCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEEEEEEECTTCTTCEEECCCE
T ss_pred CCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEEEEEEecCCCccceEECCCe
Confidence 77899999832 11 10 1134666532 2255778999999999999999999986542 12245
Q ss_pred EEEEEeccCCC----------cccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCC--Eec---c-----
Q psy16859 63 RVDVINVSSGA----------VKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGI--KDI---T----- 122 (168)
Q Consensus 63 ~l~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~~~---~----- 122 (168)
.|.|....... .....++.+...| ....+.+|+.++|.|.+.+. .+.+.|++.. ... .
T Consensus 111 ~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~ 188 (256)
T 3tf7_C 111 KLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSP-RNKVTVTGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGA 188 (256)
T ss_dssp EEEEEC---------------------CCEEESC-SEEEEETTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEEST
T ss_pred EEEEeCCCCCcCCCCcCcccCCCCcCccEEEecC-CEEEEeCCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCC
Confidence 67775310000 0001244455555 56778899999999999876 6789999732 110 0
Q ss_pred -------CCCCcEEEe-cCCEEEEEEccCCCCCCeeEEEEEEcCCcee
Q psy16859 123 -------TSSRTMTET-VNDYVRLTLKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 123 -------~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
...++.... .....+|.|.+++.+|+|.|+|.+.|..|..
T Consensus 189 ~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~ 236 (256)
T 3tf7_C 189 GNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQL 236 (256)
T ss_dssp TCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEE
T ss_pred CceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCcc
Confidence 012222221 2234589999999999999999999986643
No 154
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.86 E-value=1.4e-19 Score=117.46 Aligned_cols=155 Identities=14% Similarity=0.244 Sum_probs=99.0
Q ss_pred CCceEEEEECC--Eec-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccce---eeEEEEEE
Q psy16859 2 VKPEVIWLRGN--TPL-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGY---TETFARVD 65 (168)
Q Consensus 2 p~p~v~W~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~ 65 (168)
|.+.+.|||+. ..+ .....|+..... ....+|.|.+++.+|+|.|.|.+.+..+. ......|.
T Consensus 32 ~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~ 110 (256)
T 3ux9_B 32 GSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKS-GTSASLAITGLQSEDEADYYCQVRDNNENEWVFGGGTKLT 110 (256)
T ss_dssp TTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEE-TTEEEEEECSCCGGGCEEEEEEEEETTTTEEEECCCEEEE
T ss_pred CCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEcc-CCEEEEEECCCChhhCEEEEEEEEECCCCceEECCCEEEE
Confidence 67899999842 111 012357776655 56779999999999999999999986432 22345677
Q ss_pred EEeccCCCc----------ccC-CCCeEEecCCcceEeecCCeEEEEEEEccCC--CCeEEEeeC--CEec------c--
Q psy16859 66 VINVSSGAV----------KHE-KPAMFLTRPDTMMSVALGEDISFSFRLAGSP--KPKVTWMKG--IKDI------T-- 122 (168)
Q Consensus 66 v~~~~~~~~----------~~~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~--~~~~------~-- 122 (168)
|...+.... ... .++.+...+ ...+.+|+.++|.|.+.+.+ .+.+.|+++ +..+ .
T Consensus 111 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~ 188 (256)
T 3ux9_B 111 VLGSGGSTITSYNVYYTKLSSSGSEVQLVESG--GGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGS 188 (256)
T ss_dssp EC----------------------CCEEEEEC--CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSS
T ss_pred EECCCCCcCccceeEEeecCCCccceeEEcCC--CeEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccC
Confidence 754321000 000 011222222 34588999999999998866 678999985 2211 0
Q ss_pred ---------CCCCcEEEec--CCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 123 ---------TSSRTMTETV--NDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 123 ---------~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
...++..... ....+|.|.+++.+|+|.|+|.+.|..
T Consensus 189 ~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 189 GGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp SSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 1123333322 345679999999999999999999963
No 155
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.86 E-value=2.2e-20 Score=125.25 Aligned_cols=156 Identities=17% Similarity=0.277 Sum_probs=103.6
Q ss_pred CCceEEEEECC--E--------------ecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEE-EcccceeeEEEEE
Q psy16859 2 VKPEVIWLRGN--T--------------PLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRV-SNEYGYTETFARV 64 (168)
Q Consensus 2 p~p~v~W~~~~--~--------------~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~-~~~~~~~~~~~~l 64 (168)
|.+.+.|++++ . .......|+.+........+|.|.+++.+|+|.|+|.+ .+..+.....+.|
T Consensus 46 ~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l 125 (331)
T 3u83_A 46 KITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNL 125 (331)
T ss_dssp EEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEE
T ss_pred ceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcccCcccCcEEEEEEEecCCCccEEEEEE
Confidence 44579999954 1 11123456665422234457999999999999999985 4556666667788
Q ss_pred EEEeccCCCcccCCCCeEEecCCcceEeecC---CeEEEEEE-EccCCCCeEEEeeCCEeccCCCCcEEEecCC----EE
Q psy16859 65 DVINVSSGAVKHEKPAMFLTRPDTMMSVALG---EDISFSFR-LAGSPKPKVTWMKGIKDITTSSRTMTETVND----YV 136 (168)
Q Consensus 65 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~l~C~-~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~----~~ 136 (168)
.|... |............+..| +.+.|.|. ..+.|.+.+.|+++........ ....... ..
T Consensus 126 ~V~~~---------p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~--~~~~~~~~~~~~~ 194 (331)
T 3u83_A 126 TVMAK---------PTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQ--EIRNPNGTVTVIS 194 (331)
T ss_dssp EEEBC---------CEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEE--EEECTTSCEEEEE
T ss_pred EEecC---------CcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccc--eeECCCCcEEEEE
Confidence 88542 22222222245667778 77999998 7789999999998532111100 0000111 14
Q ss_pred EEEEccCCCCCCeeEEEEEEcCCceeeEEEEC
Q psy16859 137 RLTLKRATDDENGTYFIVARNIYGSDRAFVTV 168 (168)
Q Consensus 137 ~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~v 168 (168)
.|.|..+..+|.|.|+|.|.|..|..+..+.|
T Consensus 195 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l 226 (331)
T 3u83_A 195 RYRLVPSREAHQQSLACIVNYHMDRFKESLTL 226 (331)
T ss_dssp EEEECCCGGGTTCEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeccccCCCEEEEEEecCCCcceeeEEE
Confidence 68899999999999999999999887766543
No 156
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.85 E-value=4.7e-20 Score=119.81 Aligned_cols=130 Identities=14% Similarity=0.162 Sum_probs=98.1
Q ss_pred CCc-eEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 2 VKP-EVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 2 p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
|.| .+.|++++..+... . ..|.|.+++.+|+|.|+|.+.+..+.. .+.|.|.. ++
T Consensus 29 ~~~~~~~W~~~g~~~~~~----------~--~~l~i~~~~~~d~G~Y~C~~~~~~~s~--~~~l~v~~----------~~ 84 (262)
T 3rjd_A 29 PGSSSTQWFLNGTATQTS----------T--PSYRITSASVNDSGEYRCQRGLSGRSD--PIQLEIHR----------GW 84 (262)
T ss_dssp CCTTCEEEEETTEECSCC----------S--SEEEESSCCGGGCEEEEEEESSSCCCC--CEEEEEEC----------SS
T ss_pred CCCceEEEEECCEEeecc----------C--CeEEEecCCcccCeEEEEEEecCCccc--cEEEEEec----------cc
Confidence 566 99999999988432 1 269999999999999999998765443 45566632 22
Q ss_pred eEEecCCcceEeecCCeEEEEEEE-ccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRL-AGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
... .+ ....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .....|.|.++..+|.|.|+|.+.|..
T Consensus 85 ~~~-~~-~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~--------~~~~~l~i~~~~~~d~G~Y~C~~~n~~ 154 (262)
T 3rjd_A 85 LLL-QV-SSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF--------HWNSNLTILKTNISHNGTYHCSGMGKH 154 (262)
T ss_dssp EEE-EE-SCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE--------EECCCEEESSCCGGGCEEEEEEEESSS
T ss_pred eEe-cC-CCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc--------CCCCeEEEEECChhhCEEEEEEEeCCC
Confidence 222 23 24567899999999999 67788899999998876421 112369999999999999999999998
Q ss_pred ceeeEE
Q psy16859 160 GSDRAF 165 (168)
Q Consensus 160 g~~~~~ 165 (168)
+.....
T Consensus 155 ~~~~~~ 160 (262)
T 3rjd_A 155 RYTSAG 160 (262)
T ss_dssp EEEEEC
T ss_pred Cccccc
Confidence 766543
No 157
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.85 E-value=5.7e-21 Score=123.34 Aligned_cols=156 Identities=13% Similarity=0.179 Sum_probs=100.8
Q ss_pred CCceEEEEE----------------CCEecCC--CCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc----eee
Q psy16859 2 VKPEVIWLR----------------GNTPLPK--SSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG----YTE 59 (168)
Q Consensus 2 p~p~v~W~~----------------~~~~~~~--~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~----~~~ 59 (168)
|.+.|.||| ++..+.. ...|+.+.....+..+|.|.+++.+|+|.|.|.+.+..+ ...
T Consensus 29 ~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~ 108 (246)
T 4dzb_B 29 QATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARTSGDFGEQFFG 108 (246)
T ss_dssp CCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGCEEEEEEECCSSGGGCCEEC
T ss_pred CceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHCEEEEEEEecCCCCcceEEc
Confidence 678999999 3332211 125777665335577999999999999999999987543 122
Q ss_pred EEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCC--eEEEeeCCEeccCCCCcEE---E----
Q psy16859 60 TFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKP--KVTWMKGIKDITTSSRTMT---E---- 130 (168)
Q Consensus 60 ~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~~~~~~~~~~---~---- 130 (168)
....|.|..... ...+|.+...+.....+..|+.+.|.|.+.+.+++ .+.|++++..+........ .
T Consensus 109 ~~~~l~V~~~~~----~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~ 184 (246)
T 4dzb_B 109 PGTRLTVLEDLK----NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPA 184 (246)
T ss_dssp CCEEEEEESCGG----GCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTT
T ss_pred CCEEEEEecCCC----cccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEECCCCccccccccccccc
Confidence 345677753110 01234433332234456679999999999986654 8999999988764321100 0
Q ss_pred -ecCCE---EEEEEccCCCCC-CeeEEEEEEcCCce
Q psy16859 131 -TVNDY---VRLTLKRATDDE-NGTYFIVARNIYGS 161 (168)
Q Consensus 131 -~~~~~---~~l~i~~~~~~d-~g~y~C~~~n~~g~ 161 (168)
..+.. ..|.|.....+| .|.|+|.|.|....
T Consensus 185 ~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~ 220 (246)
T 4dzb_B 185 LNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 220 (246)
T ss_dssp STTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCC
Confidence 01111 347888888888 99999999997654
No 158
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.85 E-value=4.8e-20 Score=121.50 Aligned_cols=147 Identities=14% Similarity=0.090 Sum_probs=97.2
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEEeccCCCcccCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~~~ 79 (168)
.|.|.+.|++++...... ...... .+ .+ ...|+|.|+|.+.+..+.... .+.+.|... .+
T Consensus 121 ~p~~~v~w~~~~~~~~~~---~~~~~~-~~--~~-----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~--------~~ 181 (289)
T 3mjg_X 121 DPQLVVTLHEKKGDVALP---VPYDHQ-RG--FS-----GIFEDRSYICKTTIGDREVDSDAYYVYRLQV--------SS 181 (289)
T ss_dssp CTTSCEEEEESSCCSCCC---CCEETT-TE--EE-----ECCCSSEEEEEEEETTEEEECCCEEEEECCC--------CC
T ss_pred CCCceEEEEeCCCCCccc---eeecCC-cC--ee-----eeccCcEEEEEEEeCCceeeeeeEEEEecCC--------CC
Confidence 377899999875322111 111111 11 12 357999999999876655433 455666321 24
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEe-----cCCEEEEEEccCCCCCCeeEEEE
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTET-----VNDYVRLTLKRATDDENGTYFIV 154 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~-----~~~~~~l~i~~~~~~d~g~y~C~ 154 (168)
+.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|++++............. ......|.|.++..+|.|.|+|.
T Consensus 182 p~i~~~~~-~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 260 (289)
T 3mjg_X 182 INVSVNAV-QTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCN 260 (289)
T ss_dssp CCCEEEES-CSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEE
T ss_pred CCcEEeCC-cceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEE
Confidence 44444442 3568899999999999999999999998765443322211111 11236899999999999999999
Q ss_pred EEcCCceeeEEEE
Q psy16859 155 ARNIYGSDRAFVT 167 (168)
Q Consensus 155 ~~n~~g~~~~~~~ 167 (168)
|.|..|.....+.
T Consensus 261 a~N~~G~~~~~~~ 273 (289)
T 3mjg_X 261 VTESVNDHQDEKA 273 (289)
T ss_dssp EEETTTTEEEEEE
T ss_pred eecCCCCceeEEE
Confidence 9999998876654
No 159
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.85 E-value=1.2e-20 Score=125.96 Aligned_cols=146 Identities=13% Similarity=0.033 Sum_probs=94.7
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee-----eEEEEEEEEeccCCCccc
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT-----ETFARVDVINVSSGAVKH 76 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-----~~~~~l~v~~~~~~~~~~ 76 (168)
|.+.+.|++++..+............ .....|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|...
T Consensus 145 ~~~~~~w~k~g~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~------- 216 (316)
T 3vh8_G 145 MFEHFFLHKEGISKDPSRLVGQIHDG-VSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGP------- 216 (316)
T ss_dssp CCSEEEEEETTCCSCCEEEECEEETT-EEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECS-------
T ss_pred CCcEEEEEECCCccccceeeeeecCC-CceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCC-------
Confidence 56789999999876321111111111 234589999999999999999999886632 33456666432
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEec-CCEEEEEEccCCCCCCeeEEEEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETV-NDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
..+|.+...+. ..+.+|+.++|.|.+. .|.+.+.|++++..+........... .....|.|.+++ |+|.|+|.+
T Consensus 217 ~~~p~i~~~~~--~~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a 291 (316)
T 3vh8_G 217 YEKPSLSAQPG--PKVQAGESVTLSCSSR-SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFG 291 (316)
T ss_dssp SCCCEEEEESC--SCCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEE
T ss_pred CCCCeEEeCCC--CeecCCCcEEEEEECC-CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEe
Confidence 23555555553 2568999999999997 47789999999876543211111111 123689999998 999999999
Q ss_pred EcCCc
Q psy16859 156 RNIYG 160 (168)
Q Consensus 156 ~n~~g 160 (168)
.|..+
T Consensus 292 ~n~~~ 296 (316)
T 3vh8_G 292 SFRHS 296 (316)
T ss_dssp EBTTB
T ss_pred ecCCC
Confidence 99765
No 160
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.85 E-value=3.9e-19 Score=113.26 Aligned_cols=142 Identities=15% Similarity=0.141 Sum_probs=94.6
Q ss_pred CCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccc----e--eeEEEEEEEEeccCCCcccCCCCeEE-ecCCcce
Q psy16859 19 SPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYG----Y--TETFARVDVINVSSGAVKHEKPAMFL-TRPDTMM 90 (168)
Q Consensus 19 ~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~----~--~~~~~~l~v~~~~~~~~~~~~~~~~~-~~~~~~~ 90 (168)
..|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+ . ....+.|.|.... ..+|.+. ..+. .
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~------~~~P~i~~~~~~--~ 136 (223)
T 1dee_B 65 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGS------ASAPTLFPLVSC--E 136 (223)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSC------CBCCEEEEEECT--T
T ss_pred CCeEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCC------CCCCEEEEecCC--c
Confidence 357776653 24567999999999999999999998642 1 1123467774311 1233333 3332 2
Q ss_pred EeecCCeEEEEEEEccC-CCC-eEEEee-CCEeccCCCCcE-EEecCC---EEEEEEccCCC--CCCeeEEEEEEcCCce
Q psy16859 91 SVALGEDISFSFRLAGS-PKP-KVTWMK-GIKDITTSSRTM-TETVND---YVRLTLKRATD--DENGTYFIVARNIYGS 161 (168)
Q Consensus 91 ~~~~g~~~~l~C~~~~~-p~~-~~~W~~-~~~~~~~~~~~~-~~~~~~---~~~l~i~~~~~--~d~g~y~C~~~n~~g~ 161 (168)
.+..|..++|.|.+.+. |.+ .+.|++ ++..+....... ...... .+.|.|..... +|.|.|+|.|.|..+.
T Consensus 137 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~ 216 (223)
T 1dee_B 137 NSNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGN 216 (223)
T ss_dssp CCCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCC
T ss_pred ccCCCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCC
Confidence 35689999999999886 766 899999 887764310000 001111 24678877776 7889999999999998
Q ss_pred eeEEEEC
Q psy16859 162 DRAFVTV 168 (168)
Q Consensus 162 ~~~~~~v 168 (168)
....+.|
T Consensus 217 ~~~~~~~ 223 (223)
T 1dee_B 217 KEKDVPL 223 (223)
T ss_dssp EEEEEEC
T ss_pred CcccccC
Confidence 8776643
No 161
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.85 E-value=5.9e-20 Score=116.76 Aligned_cols=138 Identities=19% Similarity=0.178 Sum_probs=92.6
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEccccee-e--EEEEEEEEeccCCCcccCCCCeEEecCCcceEeecC
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYT-E--TFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALG 95 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~--~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 95 (168)
.|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+.. . ....|.|.... ..+|.+...+. ...+..|
T Consensus 68 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~~-~~~~~~g 140 (220)
T 1pz5_B 68 GRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSAT------TTAPSVYPLVP-GCSDTSG 140 (220)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC------CBCCEEEEECC-CSCCSCS
T ss_pred CcEEEEEeCCCCeEEEEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCC------CCCCeEEEccc-ccccCCC
Confidence 57776543 2456789999999999999999999865321 1 24566764321 12344433331 2235689
Q ss_pred CeEEEEEEEccC-CCC-eEEEeeCCEecc--CCCCcEEEecC---CEEEEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 96 EDISFSFRLAGS-PKP-KVTWMKGIKDIT--TSSRTMTETVN---DYVRLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 96 ~~~~l~C~~~~~-p~~-~~~W~~~~~~~~--~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
+.+.|.|.+.|. |.| .+.|++++.... ..... . ... ..+.|.|.....++ |.|+|.|.|..|..+..+.
T Consensus 141 ~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~-~-~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 141 SSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSV-L-QSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp SSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCE-E-ETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred CcEEEEEEEEEEeCCCeEEEEecCCcccceEEcCCc-c-cCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 999999999986 888 999998775311 00000 0 111 12568888888866 9999999999998887765
No 162
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.85 E-value=2.3e-20 Score=120.32 Aligned_cols=140 Identities=15% Similarity=0.158 Sum_probs=97.6
Q ss_pred CceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee--eEEEEEEEEeccCCCcccCCCC
Q psy16859 3 KPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT--ETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 3 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
.+.+.|||++..+.....+. . .......|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|... ..+|
T Consensus 34 ~~~~~w~k~g~~~~~~~~~~--~-~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~-------~~~P 103 (242)
T 1p6f_A 34 AVEYQLHFEGSLFAVDRPKP--P-ERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEM-------YDTP 103 (242)
T ss_dssp CCEEEEEETTEEEEEECCSS--C-TTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEECC-------SCCC
T ss_pred CcEEEEEECCCccccccccc--c-CCcceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEEeecc-------cCCC
Confidence 46889999998763111110 0 11334589999999999999999998754332 23466667432 1244
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
.+...+. ..+.+|+.++|.|.+.+. .+.+.|++++..+.. ..........|.|.+++.+|+|.|+|.+.|..
T Consensus 104 ~i~~~p~--~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~----~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~ 175 (242)
T 1p6f_A 104 TLSVHPG--PEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 175 (242)
T ss_dssp EEEEESC--SEEETTCEEEEEEECTTS-CSEEEEEECSSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEEEEEET
T ss_pred ceEccCC--CccCCCCcEEEEEecCCC-CCEEEEEECCCccCc----cccCCCceEEEEeCCCccccCEEEEEEEECCC
Confidence 5554452 457899999999998764 468999999875543 11233456789999999999999999999863
No 163
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.85 E-value=3.4e-20 Score=127.01 Aligned_cols=156 Identities=21% Similarity=0.246 Sum_probs=105.4
Q ss_pred CCCceEEEEECC---EecCCC---CCceEEEecCCCEEEEEEcCCCCCCCe---EEEEEEEcccceeeEEEEEEEEe---
Q psy16859 1 YVKPEVIWLRGN---TPLPKS---SPRFKYIEDSNNLHTLILSGVTAEEAG---KYTCRVSNEYGYTETFARVDVIN--- 68 (168)
Q Consensus 1 ~p~p~v~W~~~~---~~~~~~---~~~~~~~~~~~~~~~l~i~~~~~~d~G---~Y~C~~~~~~~~~~~~~~l~v~~--- 68 (168)
+|.|.+.|++++ .+.... ..++....+ + +|.|.+++.+|+| .|+|.+.|..+............
T Consensus 128 ~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~--~--~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~ 203 (395)
T 1bih_A 128 YPKPLITWKKRLSGADPNADVTDFDRRITAGPD--G--NLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVT 203 (395)
T ss_dssp ESCCEEEEEEEETTSCGGGCCCCCCTTEEECTT--S--CEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCB
T ss_pred CCCCeEEEEecCCCcCcccccccccccEEEcCC--C--cEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccc
Confidence 478999999986 222111 334443322 2 6999999999999 99999999887654433222211
Q ss_pred ccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEec--CCEEEEEEccCCCC
Q psy16859 69 VSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETV--NDYVRLTLKRATDD 146 (168)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~ 146 (168)
..........+|.+ .+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+........... .....|.|.++..+
T Consensus 204 ~~~~~~~~~~~p~~--~~-~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 280 (395)
T 1bih_A 204 KDNSGYKGEPVPQY--VS-KDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPE 280 (395)
T ss_dssp CCSSCCCCCCEEEE--EC-CSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGG
T ss_pred cccccccCCcCcee--cC-CceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChh
Confidence 11000001112222 23 456788999999999999999999999999988765433222211 12237999999999
Q ss_pred CCeeEEEEEEcCCceee
Q psy16859 147 ENGTYFIVARNIYGSDR 163 (168)
Q Consensus 147 d~g~y~C~~~n~~g~~~ 163 (168)
|+|.|+|.|.|..|...
T Consensus 281 d~G~Y~C~a~n~~g~~~ 297 (395)
T 1bih_A 281 DEGVYTCEVDNGVGKPQ 297 (395)
T ss_dssp GCEEEEEEECCSSSSCE
T ss_pred hCEEEEEEEEeCCCCce
Confidence 99999999999998754
No 164
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.85 E-value=8.1e-21 Score=127.33 Aligned_cols=146 Identities=9% Similarity=0.103 Sum_probs=88.5
Q ss_pred eEEEEECCEecCCCCCceEEEecCCC----EEEEEEcCCCCCCCeEEEEEEEccccee---eEEEEEEEEeccCCCcccC
Q psy16859 5 EVIWLRGNTPLPKSSPRFKYIEDSNN----LHTLILSGVTAEEAGKYTCRVSNEYGYT---ETFARVDVINVSSGAVKHE 77 (168)
Q Consensus 5 ~v~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~---~~~~~l~v~~~~~~~~~~~ 77 (168)
++.|++++..+......+. ....++ ...|.|.....+|.|.|+|.+.|..+.. .....+.+.. .
T Consensus 150 ~v~W~k~g~~l~~~~~~~~-~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v--------~ 220 (327)
T 2wng_A 150 TLKWFKNGNELSDFQTNVD-PVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETI--------R 220 (327)
T ss_dssp EEEEEETTEECCCEEEEEE-CSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTB--------C
T ss_pred EEEEEECCEEccccccccc-cccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEecccc--------C
Confidence 9999999998843221111 111011 2358888777788899999999987652 2233332210 2
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcEEEec-CC----EEEEEEccCCCCCCee
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTMTETV-ND----YVRLTLKRATDDENGT 150 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~-~~----~~~l~i~~~~~~d~g~ 150 (168)
.+|.+...+. . +.+|+.+.|.|.+.|. |++ .+.|++++..+........... .. ...|.|..+..+|.|.
T Consensus 221 ~~P~i~~~~~-~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~ 297 (327)
T 2wng_A 221 VPPTLEVTQQ-P--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVK 297 (327)
T ss_dssp BCCEEEEEEE-C--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCE
T ss_pred CCCEEEEecC-C--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCE
Confidence 3455554442 2 6789999999999985 444 7999999987754321111111 11 1468888999999999
Q ss_pred EEEEEEcCCcee
Q psy16859 151 YFIVARNIYGSD 162 (168)
Q Consensus 151 y~C~~~n~~g~~ 162 (168)
|+|.|.|..|..
T Consensus 298 Y~C~a~N~~~~~ 309 (327)
T 2wng_A 298 LTCQVEHDGQPA 309 (327)
T ss_dssp EEEEEEETTCCC
T ss_pred EEEEEEeCCCCC
Confidence 999999998864
No 165
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.85 E-value=1.4e-19 Score=115.43 Aligned_cols=156 Identities=16% Similarity=0.207 Sum_probs=100.7
Q ss_pred CceEEEEECC--Eec----------------CCCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccc-----e-
Q psy16859 3 KPEVIWLRGN--TPL----------------PKSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYG-----Y- 57 (168)
Q Consensus 3 ~p~v~W~~~~--~~~----------------~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-----~- 57 (168)
.+.|.||++. ..+ .....|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+ .
T Consensus 31 ~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~ 110 (225)
T 1op3_H 31 AHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVEDTAIYYCARKGSDRLSDNDPF 110 (225)
T ss_dssp GSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCSSCCSSCCE
T ss_pred CceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCCccccccc
Confidence 5789999853 211 012357776643 24567999999999999999999998754 1
Q ss_pred -e-eEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcEEEec-
Q psy16859 58 -T-ETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTMTETV- 132 (168)
Q Consensus 58 -~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~- 132 (168)
. .....|.|...+. ..|..+...+.. .+..|+.+.|.|.+.+. |.+ .+.|++++..+...........
T Consensus 111 ~~~~~~~~L~V~~~~~-----~~P~v~~~~~~~--~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~ 183 (225)
T 1op3_H 111 DAWGPGTVVTVSPAST-----KGPSVFPLAPSS--KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSS 183 (225)
T ss_dssp EEECCCEEEEEESCSC-----BCCEEEEECCCT--TCCCCCEEEEEEEEEEEBSSCCEEECCTTSCCTTCEECCCEECTT
T ss_pred eeecCCEEEecccCCC-----cCCeEEEecccc--cccCCCcEEEEEEEEeEECCCeEEEEecCCCcCCeEecCceeCCC
Confidence 1 1245777754221 123333344432 24689999999999885 766 8999998865321100001111
Q ss_pred CC---EEEEEEccCCCCCCeeEEEEEEcCCceeeEEE
Q psy16859 133 ND---YVRLTLKRATDDENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 133 ~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 166 (168)
+. .+.|.|.....+| |.|+|.|.|..+.....+
T Consensus 184 g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 219 (225)
T 1op3_H 184 GLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDK 219 (225)
T ss_dssp SCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEEEEE
T ss_pred CCEEEEEEEEEechhcCC-CcEEEEEEcCCCCccEEE
Confidence 11 2468898888888 999999999877655443
No 166
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.85 E-value=3.3e-20 Score=128.75 Aligned_cols=149 Identities=16% Similarity=0.249 Sum_probs=98.4
Q ss_pred CCCc-eEEEEECCEecCCC-CCceEEEecCCC----EEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCc
Q psy16859 1 YVKP-EVIWLRGNTPLPKS-SPRFKYIEDSNN----LHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAV 74 (168)
Q Consensus 1 ~p~p-~v~W~~~~~~~~~~-~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~ 74 (168)
+|.| +|.|++++..+... ..........++ ...|.|.+++.+|+|.|+|.+.|..+..... +.+..
T Consensus 144 ~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~--~~~~~------ 215 (438)
T 1qgc_4 144 YPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIV--KSFNR------ 215 (438)
T ss_dssp BSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEE--EEEET------
T ss_pred cCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCcee--ccccc------
Confidence 4777 99999999988432 011111111111 3479999999999999999999987664322 23321
Q ss_pred ccCCCCeEEecCCcceEeecCCeEEEEEEEccCC--CCeEEEeeC--CEecc-----------------CCCCcEEEec-
Q psy16859 75 KHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSP--KPKVTWMKG--IKDIT-----------------TSSRTMTETV- 132 (168)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~--~~~~~-----------------~~~~~~~~~~- 132 (168)
..++.....+ ....+.+|+.+.|.|.+.+.| .+.+.|+++ +..+. ...++.....
T Consensus 216 --~~~~~~~~~~-~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 292 (438)
T 1qgc_4 216 --NECEVMLVES-GGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDN 292 (438)
T ss_dssp --TC-CCEEEEE-CCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEET
T ss_pred --ccceeEEecC-CceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeec
Confidence 1122222233 356788999999999999988 678999985 33221 1223333322
Q ss_pred -CCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 133 -NDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 133 -~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
.....|.|.+++.+|+|.|+|.|.|..+
T Consensus 293 ~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 321 (438)
T 1qgc_4 293 AKNTLYLQMSSLRSADTAMYYCVRREDGG 321 (438)
T ss_dssp TTTEEEEEECSCCGGGCCEEEEEECCSSS
T ss_pred CCCeEEEEECCCChhhCEEEEEEEEccCC
Confidence 2356899999999999999999998433
No 167
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.84 E-value=1.5e-19 Score=115.00 Aligned_cols=137 Identities=21% Similarity=0.186 Sum_probs=92.2
Q ss_pred CCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccce---eeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeec
Q psy16859 19 SPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGY---TETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVAL 94 (168)
Q Consensus 19 ~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (168)
..|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+..+. ......|.|...+ ..+|.+...+. ..+..
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~------~~~P~v~~~~~--~~~~~ 136 (220)
T 2fbj_H 65 KDKFIISRDNAKNSLYLQMSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAES------ARNPTIYPLTL--PPALS 136 (220)
T ss_dssp TTTEEEEECSSSCEEEEEECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSC------CBCCEEEEECC--CSSSC
T ss_pred CCcEEEEeeCCCCEEEEEECCCChhhCEEEEEEEeccccccceecCCEEEEecCCC------CCCCEEEEeec--ccccC
Confidence 357777654 245679999999999999999999986543 1224567774321 12344443332 23568
Q ss_pred CCeEEEEEEEccC-CC--CeEEEeeCCEeccC-CCCcEEEecCC---EEEEEEccCCCCCCeeEEEEEEcCCceee
Q psy16859 95 GEDISFSFRLAGS-PK--PKVTWMKGIKDITT-SSRTMTETVND---YVRLTLKRATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 95 g~~~~l~C~~~~~-p~--~~~~W~~~~~~~~~-~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 163 (168)
|+.++|.|.+.+. |. +.+.|++++..+.. .........+. .+.|.|......|.|.|+|.|.|..|...
T Consensus 137 g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 137 SDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred CCcEEEEEEEEeEECCCcEEEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 9999999999885 65 68999998865421 01111101111 13588988888999999999999988754
No 168
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.84 E-value=8e-20 Score=118.05 Aligned_cols=154 Identities=18% Similarity=0.218 Sum_probs=97.8
Q ss_pred CceEEEEECC--Ee---cC--------CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee-EEEEEEEEe
Q psy16859 3 KPEVIWLRGN--TP---LP--------KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE-TFARVDVIN 68 (168)
Q Consensus 3 ~p~v~W~~~~--~~---~~--------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~ 68 (168)
.+.+.||++. .. +. ....|+.+... .+..+|.|.+++.+|+|.|.|.+.+..+... ....|.|..
T Consensus 35 ~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 113 (247)
T 1svz_A 35 NTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGS-GTDFTLKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKG 113 (247)
T ss_dssp CBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred CceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccC-CCEEEEEECCCCHHHCEEEEEEEccCCccEECCCEEEEEEC
Confidence 6899999942 11 10 12457776654 6677999999999999999999998754322 245677743
Q ss_pred ccCCC--cc-cCCCCeEEecCCcceEeecCCeEEEEEEEccCC--CCeEEEeeCC--Eec------c-----------CC
Q psy16859 69 VSSGA--VK-HEKPAMFLTRPDTMMSVALGEDISFSFRLAGSP--KPKVTWMKGI--KDI------T-----------TS 124 (168)
Q Consensus 69 ~~~~~--~~-~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~~--~~~------~-----------~~ 124 (168)
.+... .. ...++.....+ ....+.+|+.++|.|.+.+.+ .+.+.|+++. ..+ . ..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (247)
T 1svz_A 114 GGGSGGGGSGGGGSEVQLQQS-GPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFK 192 (247)
T ss_dssp --------------CCEEEEC-CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGS
T ss_pred CccccccccccccCceEEeCC-CceeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCcccc
Confidence 21100 00 00122233333 234588999999999998875 5689999852 111 0 02
Q ss_pred CCcEEEe--cCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 125 SRTMTET--VNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 125 ~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
.++.... .....+|.|.+++.+|+|.|+|.+.|.
T Consensus 193 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 193 GRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp SSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 2333322 233568999999999999999999985
No 169
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.84 E-value=3.8e-20 Score=104.77 Aligned_cols=89 Identities=28% Similarity=0.397 Sum_probs=77.5
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.||.+...+ ..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+....++.+.......+|.|.++..+|+|.|+|.|.|
T Consensus 12 ~pP~f~~~p-~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 12 SPPCFLRFP-RPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EEEEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEeCC-CcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEE
Confidence 466777666 5788999999999999999999999999999999887777766666677899999999999999999999
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
..|.....+.
T Consensus 91 ~~G~~~~~~~ 100 (107)
T 3knb_B 91 AAGEAYAAAA 100 (107)
T ss_dssp TTEEEEEEEE
T ss_pred CCCEEEEEEE
Confidence 9998876654
No 170
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.84 E-value=3.7e-20 Score=128.46 Aligned_cols=150 Identities=18% Similarity=0.217 Sum_probs=103.3
Q ss_pred ceEEEEECC--Eec-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee-eEEEEEEEEec
Q psy16859 4 PEVIWLRGN--TPL-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT-ETFARVDVINV 69 (168)
Q Consensus 4 p~v~W~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~ 69 (168)
+.|.||+++ ..+ .....|+..... ++..+|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|...
T Consensus 35 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~ 113 (438)
T 1qgc_4 35 SFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGS-RTDFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRA 113 (438)
T ss_dssp ECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCC
T ss_pred ceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEcc-CCcEEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCC
Confidence 489999963 221 112357776655 667799999999999999999999887643 23456666322
Q ss_pred cCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcEEEe--c--CC---EEEEEE
Q psy16859 70 SSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTMTET--V--ND---YVRLTL 140 (168)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~~~~--~--~~---~~~l~i 140 (168)
..+|.+...+... ....|..+.|.|.+.+ .|.+ .+.|++++..+.......... . .. ...|.|
T Consensus 114 -------~~~P~v~~~~~~~-~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i 185 (438)
T 1qgc_4 114 -------DAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTL 185 (438)
T ss_dssp -------CBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEE
T ss_pred -------CCCCEEEecCCCh-hhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEE
Confidence 1244444433222 2346889999999987 6777 899999998876541111000 0 11 247999
Q ss_pred ccCCCCCCeeEEEEEEcCCcee
Q psy16859 141 KRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 141 ~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
.++..+|+|.|+|.|.|..|..
T Consensus 186 ~~~~~~d~G~Y~C~a~n~~~~~ 207 (438)
T 1qgc_4 186 TKDEYERHNSYTCEATHKTSTS 207 (438)
T ss_dssp EHHHHHTCCEEEEEEEETTCSS
T ss_pred eCcccCCCCeEEEEEEecccCC
Confidence 9999999999999999998874
No 171
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.84 E-value=1.3e-19 Score=115.91 Aligned_cols=139 Identities=14% Similarity=0.182 Sum_probs=89.4
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccc------e--ee-EEEEEEEEeccCCCcccCCCCeEE-ecCCc
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYG------Y--TE-TFARVDVINVSSGAVKHEKPAMFL-TRPDT 88 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~------~--~~-~~~~l~v~~~~~~~~~~~~~~~~~-~~~~~ 88 (168)
.|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+ . .. ..+.|.|.... ..+|.+. ..+.
T Consensus 67 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~------~~~P~i~~~~~~- 139 (228)
T 3bae_H 67 SRLTISKDTSRDMVFMKITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAK------TTAPSVYPLAPV- 139 (228)
T ss_dssp GGEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCC------CBCCEEEEECC--
T ss_pred CcEEEEEcCCCCeEEEEEcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCC------CCCCEEEEeccc-
Confidence 57776543 23567999999999999999999998754 1 11 23567774311 1234333 3332
Q ss_pred ceEeecCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcEEEecC---CEEEEEEccCCCCCCeeEEEEEEcCCceee
Q psy16859 89 MMSVALGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTMTETVN---DYVRLTLKRATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 89 ~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 163 (168)
..+..|+.+.|.|.+.+. |.+ .+.|++++..+............ ..+.|.|.....++ |.|+|.|.|..|...
T Consensus 140 -~~~~~g~~~~l~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~ 217 (228)
T 3bae_H 140 -CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTK 217 (228)
T ss_dssp -----CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEE
T ss_pred -ccccCCCCEEEEEEEccEeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCC
Confidence 235689999999999885 777 89999987643211101111111 12468888888866 999999999998776
Q ss_pred EEEE
Q psy16859 164 AFVT 167 (168)
Q Consensus 164 ~~~~ 167 (168)
....
T Consensus 218 ~~~~ 221 (228)
T 3bae_H 218 VDKK 221 (228)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 172
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.84 E-value=1.8e-20 Score=126.56 Aligned_cols=153 Identities=15% Similarity=0.167 Sum_probs=100.4
Q ss_pred CCceEEEEEC--CEec----------------CCCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEE
Q psy16859 2 VKPEVIWLRG--NTPL----------------PKSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFA 62 (168)
Q Consensus 2 p~p~v~W~~~--~~~~----------------~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 62 (168)
|.+.|.|||+ +..+ .....|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+......
T Consensus 30 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~ 109 (344)
T 1za6_B 30 TDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLNMAYWGQGT 109 (344)
T ss_dssp TSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTTTCEECCCE
T ss_pred cccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEecCcceecCcE
Confidence 4689999996 3221 012457776643 24567999999999999999999998554444456
Q ss_pred EEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CC-CeEEEeeCCEeccCCCCcEEEec-CC---EE
Q psy16859 63 RVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PK-PKVTWMKGIKDITTSSRTMTETV-ND---YV 136 (168)
Q Consensus 63 ~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~~~~~~~~~~~~~-~~---~~ 136 (168)
.|.|...+ ..+|.+...+. ...+..|+.+.|.|.+.|. |. +.+.|++++..+........... .. ..
T Consensus 110 ~l~V~~~~------~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s 182 (344)
T 1za6_B 110 LVTVSSAS------TKGPSVFPLAP-SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSS 182 (344)
T ss_dssp EEEECSSC------CBCCEEEEECC-SCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEE
T ss_pred EEEEecCC------CCCCeEEEccc-cccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEEEE
Confidence 77774211 12333333221 2235789999999999986 54 68999998865321100000111 11 24
Q ss_pred EEEEccCCCCCCeeEEEEEEcCCcee
Q psy16859 137 RLTLKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 137 ~l~i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
.|.|..+..+| |.|+|.|.|..|..
T Consensus 183 ~L~i~~~~~~d-G~Y~C~a~n~~~~~ 207 (344)
T 1za6_B 183 VVTVPSSSLGT-QTYICNVNHKPSNT 207 (344)
T ss_dssp EEEEETTHHHH-BCEEEEEEEGGGTE
T ss_pred EEEEcHHHcCC-CcEEEEEEeCCCCc
Confidence 68888888878 99999999988754
No 173
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.84 E-value=4.3e-20 Score=122.79 Aligned_cols=153 Identities=14% Similarity=0.216 Sum_probs=99.1
Q ss_pred CCceEEEEECCEecC----------------CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcc-cceeeEEEEE
Q psy16859 2 VKPEVIWLRGNTPLP----------------KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNE-YGYTETFARV 64 (168)
Q Consensus 2 p~p~v~W~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~-~~~~~~~~~l 64 (168)
|.+.|.|+|++.... ....|+.......+..+|.|.+++.+|+|.|+|.+.+. .+.......+
T Consensus 28 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~ 107 (308)
T 4fom_A 28 TITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTV 107 (308)
T ss_dssp CEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEE
Confidence 456799998642210 11234433322234457999999999999999999875 4555556666
Q ss_pred EEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEE-ccCCCCeEEEeeCCEeccCCCCcEE-EecCCEEEEEEcc
Q psy16859 65 DVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRL-AGSPKPKVTWMKGIKDITTSSRTMT-ETVNDYVRLTLKR 142 (168)
Q Consensus 65 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~~~~~~~~~~~~~~-~~~~~~~~l~i~~ 142 (168)
.+...+ ++.....+ .......|+.+.|.|.+ .|.|.+.+.|++++..+........ ........|.|..
T Consensus 108 ~v~~~~--------~~~~~~~~-~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~ 178 (308)
T 4fom_A 108 TVLVEP--------TVSLIKGP-DSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFP 178 (308)
T ss_dssp EEEBCC--------EEEEEECS-SCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECC
T ss_pred Eeeecc--------cccccccc-ceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeecccccccceEEe
Confidence 664321 11222223 34455678899999985 5789999999998876643211000 0000124689999
Q ss_pred CCCCCCeeEEEEEEcCCceee
Q psy16859 143 ATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 143 ~~~~d~g~y~C~~~n~~g~~~ 163 (168)
+..+|.|.|+|.|.|..|...
T Consensus 179 ~~~~d~g~Y~C~a~n~~~~~~ 199 (308)
T 4fom_A 179 TRFARGRRITCVVKHPALEKD 199 (308)
T ss_dssp CGGGTTCEEEEEEECTTCSSC
T ss_pred eeecCCccEEEEEEccCCCCc
Confidence 999999999999999876543
No 174
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.84 E-value=5.3e-20 Score=122.87 Aligned_cols=143 Identities=15% Similarity=0.056 Sum_probs=97.5
Q ss_pred CceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc-----eeeEEEEEEEEeccCCCcccC
Q psy16859 3 KPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG-----YTETFARVDVINVSSGAVKHE 77 (168)
Q Consensus 3 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~~~~~~~~~~ 77 (168)
.+.+.|+|++..+... ... . .....|.|.+++.+|+|.|+|.+.+..+ .....+.|.|....
T Consensus 51 ~~~~~W~k~g~~~~~~---~~~--~-~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~------- 117 (316)
T 3vh8_G 51 FNNFMLYKEDRIHIPI---FHG--R-IFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNH------- 117 (316)
T ss_dssp CCSEEEEESSCSSSCH---HHH--C-CBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSS-------
T ss_pred CceEEEEeCCCcccee---ecC--C-cceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCC-------
Confidence 4789999999876321 000 0 1123799999999999999999986422 22334666665322
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcE-EEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTM-TETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
.+|.+...+. . .+.+|+.++|.|.+. .+.+.+.|++++..+....... .........|.|.++..+|+|.|+|.+.
T Consensus 118 ~~p~~~~~~~-~-~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 194 (316)
T 3vh8_G 118 RKPSLLAHPG-P-LVKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGS 194 (316)
T ss_dssp CCCEEEEESC-S-EEETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCeEEecCC-C-ccCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEe
Confidence 2455555553 2 378999999999995 4667899999887664322111 1111234689999999999999999999
Q ss_pred cCCce
Q psy16859 157 NIYGS 161 (168)
Q Consensus 157 n~~g~ 161 (168)
|..|.
T Consensus 195 n~~g~ 199 (316)
T 3vh8_G 195 VTHTP 199 (316)
T ss_dssp CTTCT
T ss_pred cCCCC
Confidence 98773
No 175
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.83 E-value=1e-20 Score=123.38 Aligned_cols=132 Identities=18% Similarity=0.178 Sum_probs=95.5
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccc-ceee---EEEEEEEEeccCCCcccC
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEY-GYTE---TFARVDVINVSSGAVKHE 77 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-~~~~---~~~~l~v~~~~~~~~~~~ 77 (168)
|.|++.| +|..+... +....|.|..+..+|.|.|+|.+.|.. |... ..+.|.|..++.
T Consensus 124 p~~~i~W--~g~~~~~~----------~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~------ 185 (265)
T 2oz4_A 124 PRAKVTL--NGVPAQPL----------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPR------ 185 (265)
T ss_dssp TTSEEEE--SSCSSSCC----------SSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEE------
T ss_pred CCCEEEE--CCEEccCC----------CCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCc------
Confidence 7899999 77776221 223468899999999999999998544 5544 456777754332
Q ss_pred CCCeEEec-CCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 78 KPAMFLTR-PDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 78 ~~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
+... ......+.+|+.+.|.|.+.|.|.+.+.|++++..+... + .+ ..+..+|+|.|+|.|.
T Consensus 186 ----~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~--------g---~~--~~v~~~d~G~Y~C~a~ 248 (265)
T 2oz4_A 186 ----LDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPI--------G---ES--VTVTRDLEGTYLCRAR 248 (265)
T ss_dssp ----CCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCT--------T---SC--EECCGGGCEEEEEEEE
T ss_pred ----cccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccCCC--------C---cE--EEeehhhCeEEEEEEE
Confidence 2211 124567889999999999999999999999988722211 1 11 1367799999999999
Q ss_pred cCCceeeEEEEC
Q psy16859 157 NIYGSDRAFVTV 168 (168)
Q Consensus 157 n~~g~~~~~~~v 168 (168)
|..|..+..+.|
T Consensus 249 N~~G~~~~~~~l 260 (265)
T 2oz4_A 249 STQGEVTREVTV 260 (265)
T ss_dssp ETTEEEEEEEEE
T ss_pred CCCCcEEEEEEE
Confidence 999998876643
No 176
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.83 E-value=2e-19 Score=113.98 Aligned_cols=139 Identities=14% Similarity=0.109 Sum_probs=84.1
Q ss_pred CCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccce----eeEEEEEEEEeccCCCcccCCCCeEE-ecCCcceEee
Q psy16859 19 SPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGY----TETFARVDVINVSSGAVKHEKPAMFL-TRPDTMMSVA 93 (168)
Q Consensus 19 ~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~----~~~~~~l~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 93 (168)
..|+.+... .+..+|.|.+++.+|+|.|.|.+.+..+. ......|.|.... ..+|.+. ..+. ..+.
T Consensus 63 ~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~~~--~~~~ 133 (215)
T 3nl4_H 63 KGRFTISKT-STTVDLKITSPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQ------PKAPSVFPLAPC--CGDT 133 (215)
T ss_dssp TTTEEEEEC-SSEEEEEESSCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSC------CBCCEEEEECCC--TTCC
T ss_pred cCCEEEEee-CCEEEEEECCCCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCC------cCCCEEEEecCC--cccc
Confidence 357777665 67789999999999999999999987542 2224566664221 1234444 3332 2456
Q ss_pred cCCeEEEEEEEccCCC--CeEEEeeCCEeccCCCCcEEEecCC-EEEEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 94 LGEDISFSFRLAGSPK--PKVTWMKGIKDITTSSRTMTETVND-YVRLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 94 ~g~~~~l~C~~~~~p~--~~~~W~~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
.|+.++|.|.+.+.++ ..+.|++++..+............. ........+...| |.|+|.|.|..|......+
T Consensus 134 ~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~ 209 (215)
T 3nl4_H 134 PSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKT 209 (215)
T ss_dssp C--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEE
T ss_pred CCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEe
Confidence 7999999999988543 3588999886543221111111111 1121223345556 9999999999987765544
No 177
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.83 E-value=3.1e-19 Score=114.07 Aligned_cols=138 Identities=14% Similarity=0.122 Sum_probs=86.1
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEccccee-eEEEEEEEEeccCCCcccCCCCeE-EecCCcceEeecCC
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYT-ETFARVDVINVSSGAVKHEKPAMF-LTRPDTMMSVALGE 96 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~ 96 (168)
.|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..... .....|.|.... ..+|.+ ...+. ..+..|+
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~------~~~P~v~~~~~~--~~~~~g~ 137 (227)
T 1mju_H 66 NKATLTVDTSSSTAYMQLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAK------TTAPSVYPLAPV--CGDTSGS 137 (227)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSC------CBCCEEEEECCC--C------
T ss_pred CcEEEEEeCCCCeEEEEECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCC------CCCCEEEEecCC--ccccCCC
Confidence 57776543 2456799999999999999999998753222 123567774311 123333 33332 2356899
Q ss_pred eEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcEEEecC---CEEEEEEccCCCCCCeeEEEEEEcCCceeeEEE
Q psy16859 97 DISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTMTETVN---DYVRLTLKRATDDENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 97 ~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 166 (168)
.++|.|.+.|. |.+ .+.|++++..+...........+ ..+.|.|.....+| |.|+|.|.|..+......
T Consensus 138 ~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 211 (227)
T 1mju_H 138 SVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDK 211 (227)
T ss_dssp CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred cEEEEEEeecEeCCCeEEEEecCCCcCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEE
Confidence 99999999984 766 89999988654211000011111 12478898888888 999999999876654433
No 178
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.83 E-value=1.2e-19 Score=101.46 Aligned_cols=89 Identities=27% Similarity=0.500 Sum_probs=74.7
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCC--CcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSS--RTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
||.+...| ..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++.........+|.|.++..+|+|.|+|.|.
T Consensus 5 PP~i~~~p-~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 5 PPKIEALP-SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEECCCC-SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEeCC-CcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 55665555 57889999999999999999999999999999887654 4555555667889999999999999999999
Q ss_pred cCCceeeEEEEC
Q psy16859 157 NIYGSDRAFVTV 168 (168)
Q Consensus 157 n~~g~~~~~~~v 168 (168)
|..|..+..+.|
T Consensus 84 N~~G~~~~~~~l 95 (100)
T 3knb_A 84 NEFGSDSATVNI 95 (100)
T ss_dssp ETTEEEEEEEEE
T ss_pred ECCCEEEEEEEE
Confidence 999998866543
No 179
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.83 E-value=1.3e-21 Score=125.30 Aligned_cols=151 Identities=15% Similarity=0.218 Sum_probs=83.8
Q ss_pred CCceEEEEECC--Eec-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEE
Q psy16859 2 VKPEVIWLRGN--TPL-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVI 67 (168)
Q Consensus 2 p~p~v~W~~~~--~~~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~ 67 (168)
|.+.|.||+++ ..+ .....|+..... ++..+|.|.+++.+|+|.|.|.+.+..+.... ...|.|.
T Consensus 51 ~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~ 129 (233)
T 3bqu_C 51 IDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGY-GTDFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTNLEIK 129 (233)
T ss_dssp ESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEE-EEEEEEC-----CCCCSEEEEEECSSSSCCBCCCCBC---
T ss_pred CCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeecc-CCEEEEEECCCCHHHCEEEEEEEecCCceeecCCEEEEEe
Confidence 56789999853 111 011234443322 34558999999999999999999887553322 3345563
Q ss_pred eccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcEE--EecC-----CEEEE
Q psy16859 68 NVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTMT--ETVN-----DYVRL 138 (168)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~~--~~~~-----~~~~l 138 (168)
.. ..+|.+...+... ....|+.++|.|.+.+. |.+ .+.|++++..+........ .... ....|
T Consensus 130 ~~-------~~~p~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L 201 (233)
T 3bqu_C 130 RA-------DAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTL 201 (233)
T ss_dssp CC-------CBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEEEEE
T ss_pred CC-------CCCCEEEEeCCCH-HhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEEEEE
Confidence 32 1244454433222 23479999999999884 443 7999999887654300000 0001 12468
Q ss_pred EEccCCCCCCeeEEEEEEcCCce
Q psy16859 139 TLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 139 ~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
.|.....+|.|.|+|.|.|....
T Consensus 202 ~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 202 TLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp EEEHHHHHTCCCEEEEEEEC---
T ss_pred EECHHHhCCCCCEEEEEEeCCCC
Confidence 88888889999999999997654
No 180
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.83 E-value=9.1e-20 Score=117.62 Aligned_cols=156 Identities=13% Similarity=0.133 Sum_probs=99.7
Q ss_pred CCCceEEEEE--------------CCEecCCC---CCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccc----ceee
Q psy16859 1 YVKPEVIWLR--------------GNTPLPKS---SPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEY----GYTE 59 (168)
Q Consensus 1 ~p~p~v~W~~--------------~~~~~~~~---~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~----~~~~ 59 (168)
.|.+.|.||| ++..+... ..|+.+.....+..+|.|.+++.+|+|.|.|.+.+.. ....
T Consensus 28 ~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~ 107 (245)
T 4ei6_B 28 SNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSAVYFCASSFWGAYAEQFFG 107 (245)
T ss_dssp TTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGCEEEEEEEECSSTTCCCEEC
T ss_pred CCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHCEEEEEEEccCCCcceEEEc
Confidence 3678999998 22222111 1677776643557799999999999999999998532 2222
Q ss_pred EEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcEE---E----
Q psy16859 60 TFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTMT---E---- 130 (168)
Q Consensus 60 ~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~~---~---- 130 (168)
....|.|..... ...+|.+...+.....+..|..+.|.|.+.+ .|.+ .+.|++++..+........ .
T Consensus 108 ~~~~l~V~~~~~----~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~ 183 (245)
T 4ei6_B 108 PGTRLTVLEDLK----NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPA 183 (245)
T ss_dssp CCEEEEEESCGG----GCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTT
T ss_pred CCcEEEEecccC----CCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEECCCCccccccccccccc
Confidence 345677753110 0123433332223444667999999999988 4545 7999999988764321100 0
Q ss_pred -ecCC---EEEEEEccCCCCC-CeeEEEEEEcCCc
Q psy16859 131 -TVND---YVRLTLKRATDDE-NGTYFIVARNIYG 160 (168)
Q Consensus 131 -~~~~---~~~l~i~~~~~~d-~g~y~C~~~n~~g 160 (168)
.... ...|.|.....+| .|.|+|.|.|...
T Consensus 184 ~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l 218 (245)
T 4ei6_B 184 LNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (245)
T ss_dssp STTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred CCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCC
Confidence 0111 1357888887878 8999999998754
No 181
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.83 E-value=3.8e-19 Score=114.42 Aligned_cols=155 Identities=14% Similarity=0.147 Sum_probs=99.9
Q ss_pred CCceEEEEEC--------------CEec--CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcc--c-ceeeEEE
Q psy16859 2 VKPEVIWLRG--------------NTPL--PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNE--Y-GYTETFA 62 (168)
Q Consensus 2 p~p~v~W~~~--------------~~~~--~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~--~-~~~~~~~ 62 (168)
|.+.|.|||. +... .....|+.+.....+..+|.|.+++.+|+|.|.|.+.+. . .......
T Consensus 29 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~ 108 (240)
T 3q5y_A 29 GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDSAMYFCASSLRWGDEQYFGPGT 108 (240)
T ss_dssp TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGCEEEEEEEESSTTBCCEECCCE
T ss_pred CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHCEEEEEEEccCCCcceEEcCCE
Confidence 5689999992 2111 112357777654355779999999999999999999732 1 2222345
Q ss_pred EEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcE---EEecCCE--
Q psy16859 63 RVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTM---TETVNDY-- 135 (168)
Q Consensus 63 ~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~---~~~~~~~-- 135 (168)
.|.|..... ...+|.+...+.....+..|..+.|.|.+.+ .|.+ .+.|++++..+....... .......
T Consensus 109 ~l~V~~~~~----~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~ 184 (240)
T 3q5y_A 109 RLTVLEDLR----NVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYS 184 (240)
T ss_dssp EEEEESCGG----GCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEEEETTEEE
T ss_pred EEEEecccc----CCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECcCcEecCCceeeCCCCCEE
Confidence 677753110 0124444433323445667899999999988 5656 799999998876432111 1111221
Q ss_pred --EEEEEccCCCCC-CeeEEEEEEcCCc
Q psy16859 136 --VRLTLKRATDDE-NGTYFIVARNIYG 160 (168)
Q Consensus 136 --~~l~i~~~~~~d-~g~y~C~~~n~~g 160 (168)
+.|.|.....+| .|.|+|.|.|...
T Consensus 185 ~~s~L~i~~~~~~d~~g~YtC~v~~~~~ 212 (240)
T 3q5y_A 185 LSSRLRVSATFWHNPRNHFRCQVQFHGL 212 (240)
T ss_dssp EEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred EEEEEEECHHHhccCCCEEEEEEEcCCC
Confidence 358888888888 6799999998754
No 182
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.83 E-value=4.7e-20 Score=120.49 Aligned_cols=138 Identities=13% Similarity=0.118 Sum_probs=89.9
Q ss_pred CceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcc--cceeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCe
Q psy16859 20 PRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNE--YGYTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGED 97 (168)
Q Consensus 20 ~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~--~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 97 (168)
.|+.+.....+..+|.|.+++.+|+|.|.|.+.+. .........|.|..... ...+|.+...+.....+..|+.
T Consensus 88 ~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~----~~~~P~v~~~~~~~~~~~~g~~ 163 (268)
T 3pl6_D 88 DRFFAVRPEGSVSTLKIQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLK----NVFPPEVAVFEPSEAEISHTQK 163 (268)
T ss_dssp TTEEEECTTSSSEEEEECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGG----GCBCCEEEEECCCHHHHHHHSE
T ss_pred CcEEEEecCCCEEEEEECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcc----cccCCceEEeCCCcccccCCCc
Confidence 67777654355679999999999999999999974 22333345677753110 0123433332223445667999
Q ss_pred EEEEEEEccCCCC--eEEEeeCCEeccCCCCcE---EE-----ecCC---EEEEEEccCCCCC-CeeEEEEEEcCCce
Q psy16859 98 ISFSFRLAGSPKP--KVTWMKGIKDITTSSRTM---TE-----TVND---YVRLTLKRATDDE-NGTYFIVARNIYGS 161 (168)
Q Consensus 98 ~~l~C~~~~~p~~--~~~W~~~~~~~~~~~~~~---~~-----~~~~---~~~l~i~~~~~~d-~g~y~C~~~n~~g~ 161 (168)
++|.|.+.+.+++ .+.|++++..+....... .. .... ...|.+.....+| .|.|+|.+.|....
T Consensus 164 v~L~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 164 ATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp EEEEEEEEEEBSSCEEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred eEEEEEECcccCCCeEEEEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 9999999985544 899999988775421100 00 0111 1456777777777 99999999997543
No 183
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.83 E-value=2.5e-19 Score=118.43 Aligned_cols=139 Identities=17% Similarity=0.235 Sum_probs=89.6
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEccc-c--ee--eEEEEEEEEecc---C--CCc-ccCCCCeEEecCC
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEY-G--YT--ETFARVDVINVS---S--GAV-KHEKPAMFLTRPD 87 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-~--~~--~~~~~l~v~~~~---~--~~~-~~~~~~~~~~~~~ 87 (168)
.|+.+... ..+..+|+|.+++.+|+|.|.|.+.+.. + .. .....|.|.... . ... ....++.+...+
T Consensus 88 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p- 166 (291)
T 2gki_A 88 GKATLTSDKSSSTAYMELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSP- 166 (291)
T ss_dssp TTBCEEEEGGGTEEEEEECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSC-
T ss_pred CCEEEEEeCCCCEEEEEECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCC-
Confidence 46655432 2446789999999999999999999874 2 11 123466664310 0 000 000122333334
Q ss_pred cceEeecCCeEEEEEEEccCCCC------eEEEeeCC--Eecc------------CCCCcEEEecCCEEEEEEccCCCCC
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKP------KVTWMKGI--KDIT------------TSSRTMTETVNDYVRLTLKRATDDE 147 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~------~~~W~~~~--~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d 147 (168)
..+.+.+|+.++|.|.+.+.+.+ .+.|+++. ..+. ...++.........+|.|.+++.+|
T Consensus 167 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 246 (291)
T 2gki_A 167 SSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAED 246 (291)
T ss_dssp SEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CEEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHH
Confidence 46778999999999999987765 89999852 2110 0234443334445689999999999
Q ss_pred CeeEEEEEEcCC
Q psy16859 148 NGTYFIVARNIY 159 (168)
Q Consensus 148 ~g~y~C~~~n~~ 159 (168)
+|.|+|.+.|..
T Consensus 247 sG~Y~C~a~~~~ 258 (291)
T 2gki_A 247 LAVYYCKQSYYH 258 (291)
T ss_dssp CEEEEEEEEETT
T ss_pred CEEEEEEEccCC
Confidence 999999999853
No 184
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.83 E-value=9.3e-20 Score=118.36 Aligned_cols=144 Identities=13% Similarity=0.058 Sum_probs=94.0
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc----e-eeEEEEEEEEeccCCCccc
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG----Y-TETFARVDVINVSSGAVKH 76 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~----~-~~~~~~l~v~~~~~~~~~~ 76 (168)
+.+.+.|||++..+.... .............|.|.+++.+|+|.|+|.+.+... . ....+.|.|...
T Consensus 33 ~~~~~~W~k~g~~~~~~~-~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~------- 104 (257)
T 1b6u_A 33 RFQHFLLHREGKFKDTLH-LIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGL------- 104 (257)
T ss_dssp CCSEEEEEEESTTCEEEE-EECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEEEEEECS-------
T ss_pred CCcEEEEEECCCCCCcce-eeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCccccccCCCEEEecccC-------
Confidence 457899999986542100 000000112345899999999999999999986421 1 233566777542
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEE-ecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTE-TVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
..+|.+...+. ..+.+|+.++|.|.+.+. .+.+.|++++..+......... .......|.|.+++ |+|.|+|.+
T Consensus 105 ~~~P~l~~~p~--~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a 179 (257)
T 1b6u_A 105 YEKPSLSAQPG--PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFG 179 (257)
T ss_dssp SCCCEEECSSC--TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEE
T ss_pred CCCcceEccCC--CccCCCCEEEEEEeCCCC-CcEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEE
Confidence 12455555553 357899999999999875 4689999998765432211100 11224689999988 999999999
Q ss_pred EcC
Q psy16859 156 RNI 158 (168)
Q Consensus 156 ~n~ 158 (168)
.|.
T Consensus 180 ~~~ 182 (257)
T 1b6u_A 180 SFR 182 (257)
T ss_dssp ECS
T ss_pred EcC
Confidence 975
No 185
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.83 E-value=7.3e-20 Score=125.17 Aligned_cols=142 Identities=16% Similarity=0.296 Sum_probs=100.4
Q ss_pred CCCceEEEEE-CCEecCCCCCceEEEecCCCEEEEEEcCCCCCC------CeEEEEEEEcccceee-EEEEEEEEeccCC
Q psy16859 1 YVKPEVIWLR-GNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEE------AGKYTCRVSNEYGYTE-TFARVDVINVSSG 72 (168)
Q Consensus 1 ~p~p~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d------~G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~ 72 (168)
+|.|++.|++ ++..+... .++..... ++ +|.|.+++.+| +|.|+|.+.|..|... ..+.+.+..
T Consensus 31 ~p~p~v~W~k~~g~~~~~~-~~~~~~~~-~~--~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~---- 102 (388)
T 2v5m_A 31 NPMPEIIWIRSDGTAVGDV-PGLRQISS-DG--KLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVV---- 102 (388)
T ss_dssp ESCCEEEEEETTSCBCCCB-TTTBEECS-TT--EEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred CCCCEEEEEcCCCCccccC-CCceEEcC-Cc--eEEecccChhhccccccCceEEEEEEccCCeEEecceEEEEcc----
Confidence 4889999999 78877432 23333323 33 79999999987 9999999999887643 356666643
Q ss_pred CcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCC---CeEEEeeCCEeccCC-----CCcEEEecCCEEEEEEccCC
Q psy16859 73 AVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPK---PKVTWMKGIKDITTS-----SRTMTETVNDYVRLTLKRAT 144 (168)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~~~W~~~~~~~~~~-----~~~~~~~~~~~~~l~i~~~~ 144 (168)
++.+...+ ....+.+|+.+.|.|.+.+.+. +.+.|++++..+... .+.... ....|.|.+++
T Consensus 103 ------~p~~~~~~-~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~v~ 172 (388)
T 2v5m_A 103 ------AQYYEADV-NKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVL---PSGELHIREVG 172 (388)
T ss_dssp ------CCCCCCBC-CCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEEC---TTSCEEESSCC
T ss_pred ------ccccccCc-cceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEc---cCCcEEEecCC
Confidence 22222233 4567889999999999987653 679999987654321 122111 12369999999
Q ss_pred CCCC-eeEEEEEEcCCc
Q psy16859 145 DDEN-GTYFIVARNIYG 160 (168)
Q Consensus 145 ~~d~-g~y~C~~~n~~g 160 (168)
.+|. |.|+|.+.|..+
T Consensus 173 ~~d~~G~Y~C~~~n~~~ 189 (388)
T 2v5m_A 173 PEDGYKSYQCRTKHRLT 189 (388)
T ss_dssp GGGGGCCEEEEEEETTT
T ss_pred ccccCeeEEEEeccCCC
Confidence 9999 999999999764
No 186
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.83 E-value=6.3e-20 Score=116.39 Aligned_cols=122 Identities=14% Similarity=0.169 Sum_probs=80.5
Q ss_pred EEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEc-cCC
Q psy16859 31 LHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLA-GSP 108 (168)
Q Consensus 31 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p 108 (168)
..+|.|.+++.+|+|.|.|.+.+..+.... ...+.+. .++.....+ .......+..+.+.|.+. +.|
T Consensus 82 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~-~~~~~~~~~~~~~~c~~~~~~P 150 (225)
T 4fmk_A 82 DATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVI----------AQPENHAEA-QEVTIGPQSVAVARCVSTGGRP 150 (225)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE----------BCCEEEEEE-CCBCCSSSCEEEEEEEEEEEBS
T ss_pred cEEEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeee----------cCCceeecc-cceeecceeeeeeeeeecCCCC
Confidence 457999999999999999999987665544 3334442 122333333 223455666777777654 578
Q ss_pred CCeEEEeeCCEeccCCCCcEEEecCC---EEEEEEccCCCCCCeeEEEEEEcCCceee
Q psy16859 109 KPKVTWMKGIKDITTSSRTMTETVND---YVRLTLKRATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 109 ~~~~~W~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 163 (168)
.+.+.|++++..+...........+. .+.|.|..+..+|.|.|+|.|.|..|...
T Consensus 151 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~ 208 (225)
T 4fmk_A 151 PARITWISSLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEP 208 (225)
T ss_dssp CCEEEEECSSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSC
T ss_pred CCEEEEEECCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeE
Confidence 88999998765433211111111111 24699999999999999999999987654
No 187
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.82 E-value=1.2e-18 Score=110.80 Aligned_cols=135 Identities=14% Similarity=0.155 Sum_probs=89.7
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEccc--ceeeEEEEEEEEeccCCCcccCCCCeEE-ecCCcceEeecC
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEY--GYTETFARVDVINVSSGAVKHEKPAMFL-TRPDTMMSVALG 95 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~--~~~~~~~~l~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g 95 (168)
.|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+.. ........|.|.... ..+|.+. ..+. .. ..|
T Consensus 68 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~------~~~p~v~~~~~~-~~--~~g 138 (221)
T 3m8o_H 68 GRLTISRDDSKNTAFLQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSAS------PTSPKVFPLSLC-ST--QPD 138 (221)
T ss_dssp TSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCC------CBCCEEEEEECC-SC--CCT
T ss_pred ccEEEEecCCCCEEEEEECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCC------CCCCeEEEecCc-cc--ccC
Confidence 57776543 2456789999999999999999998763 122234566774221 1233333 3342 22 689
Q ss_pred CeEEEEEEEcc-CCC--CeEEEeeCCEeccCCCCcEEE--ecCC---EEEEEEccCCCCCCeeEEEEEEcCCceee
Q psy16859 96 EDISFSFRLAG-SPK--PKVTWMKGIKDITTSSRTMTE--TVND---YVRLTLKRATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 96 ~~~~l~C~~~~-~p~--~~~~W~~~~~~~~~~~~~~~~--~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 163 (168)
..++|.|.+.+ .|. +.+.|++++..+......... .... .+.|.|......|.|.|+|.|.|..+...
T Consensus 139 ~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 139 GNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp TEEEEEEEEEEEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCCE
T ss_pred CCEEEEEEEEeeECCCCEEEEEEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCce
Confidence 99999999998 665 389999988655321100000 0111 13688999999999999999999887654
No 188
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.82 E-value=6.4e-19 Score=114.99 Aligned_cols=154 Identities=18% Similarity=0.271 Sum_probs=98.5
Q ss_pred CceEEEEEC--CEecC-----------CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee-EEEEEEEEe
Q psy16859 3 KPEVIWLRG--NTPLP-----------KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE-TFARVDVIN 68 (168)
Q Consensus 3 ~p~v~W~~~--~~~~~-----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~ 68 (168)
.+.|.||++ +..+. ....|+.+... ....+|+|.+++.+|+|.|.|.+.+..+... ....|.|..
T Consensus 40 ~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~-~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~ 118 (264)
T 2gjj_A 40 KNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGS-GTDFTLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKR 118 (264)
T ss_dssp EECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEEC
T ss_pred CceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecC-CCEEEEEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEc
Confidence 578999995 22110 12457776654 5677999999999999999999988654322 245677754
Q ss_pred ccCC--------Cccc-CCCCeEEecCCcceEeecCCeEEEEEEEccCCC--CeEEEeeCC--Ee---cc----C-----
Q psy16859 69 VSSG--------AVKH-EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPK--PKVTWMKGI--KD---IT----T----- 123 (168)
Q Consensus 69 ~~~~--------~~~~-~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~~--~~---~~----~----- 123 (168)
.+.. .... ..+......+ ....+.+|+.++|.|.+.+.+. +.+.|+++. .. +. .
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~ 197 (264)
T 2gjj_A 119 GGGGSGGGGSGGGGSGGGGSEVQLQQS-GPEVVKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATST 197 (264)
T ss_dssp C-------------------CCEEEEC-CCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEE
T ss_pred CCcccccccccccccccccCcEEEeCC-CCEEEcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccc
Confidence 3200 0000 0112222222 2346889999999999988764 789999852 11 10 0
Q ss_pred -----CCCcEEEe--cCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 124 -----SSRTMTET--VNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 124 -----~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
..++.... .....+|.|.+++.+|+|.|+|.+.|.
T Consensus 198 ~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 198 YNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp ECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred cCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 12333221 234578999999999999999999995
No 189
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.82 E-value=7.3e-19 Score=114.03 Aligned_cols=140 Identities=17% Similarity=0.158 Sum_probs=89.0
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEccc----ceeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeec
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEY----GYTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVAL 94 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~----~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (168)
.|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+.. ........|.|.... ..+|.+...+. ...+..
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~~-~~~~~~ 138 (253)
T 3liz_H 66 GRFTISRDNAKNTLFLQMSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAK------TTPPSVYPLAP-GSAAQT 138 (253)
T ss_dssp TTCEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSC------CBCCEEEEECC-------
T ss_pred CcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccC------CCCCeEEEecC-CcccCC
Confidence 57776643 2467789999999999999999998752 222234567774211 12444443221 234567
Q ss_pred CCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcEEEecC---CEEEEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 95 GEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTMTETVN---DYVRLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 95 g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
|+.+.|.|.+.+ .|.+ .+.|++++..+...........+ ..+.|.|.....+| |.|+|.|.|..+.......
T Consensus 139 g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~ 215 (253)
T 3liz_H 139 NSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKK 215 (253)
T ss_dssp CCEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred CCcEEEEEEEeeEeCCCeEEEEEeCCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEE
Confidence 999999999988 6766 89999987633211100011111 12578899999999 9999999999887665443
No 190
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.82 E-value=5.9e-19 Score=126.53 Aligned_cols=148 Identities=14% Similarity=0.182 Sum_probs=100.2
Q ss_pred CCCceEEEEECCEecCCC-----------CCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee-eEEEEEEEEe
Q psy16859 1 YVKPEVIWLRGNTPLPKS-----------SPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT-ETFARVDVIN 68 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~ 68 (168)
.|.|.|.|++++..+... ..|..+.. .+ +|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|..
T Consensus 394 ~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~--~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 469 (581)
T 3o3u_N 394 KPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLP--NG--SLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQ 469 (581)
T ss_dssp SSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECT--TS--CEEESSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEB
T ss_pred CCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcC--Cc--eEEEeccccccCeEEEEEEEcCCCceeEEEEEEEEEc
Confidence 478999999987533111 22333322 22 79999999999999999999988776 5678888865
Q ss_pred ccCCCcccCCCCeEEecCCcceEeecCCe-EEEEEEEcc-CCCCeEEEeeCCEeccCCCCcEEE-----e---cCC---E
Q psy16859 69 VSSGAVKHEKPAMFLTRPDTMMSVALGED-ISFSFRLAG-SPKPKVTWMKGIKDITTSSRTMTE-----T---VND---Y 135 (168)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~l~C~~~~-~p~~~~~W~~~~~~~~~~~~~~~~-----~---~~~---~ 135 (168)
++. .|.+.... . .+..+.. +.|.|.+.+ .|.+.+.|++++..+......... . .+. .
T Consensus 470 ~~~-------~p~i~~~~--~-~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~ 539 (581)
T 3o3u_N 470 IPG-------KPEIVDSA--S-ELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQ 539 (581)
T ss_dssp CCC-------CCEEESCC--S-EECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTTTCCEEEE
T ss_pred CCC-------CCEEEcCC--c-ccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCCceEEEE
Confidence 432 33333322 2 2445544 567999988 599999999999988654332111 1 111 2
Q ss_pred EEEEEccCC-CCCCeeEEEEEEcCCcee
Q psy16859 136 VRLTLKRAT-DDENGTYFIVARNIYGSD 162 (168)
Q Consensus 136 ~~l~i~~~~-~~d~g~y~C~~~n~~g~~ 162 (168)
++|.|..+. .++.|.|+|.+.|..+..
T Consensus 540 s~L~i~~~~~~d~~~~y~C~~~n~~~~~ 567 (581)
T 3o3u_N 540 SELMVTPARGGDPRPTFSCSFSPGLPRH 567 (581)
T ss_dssp EEEEECCCTTSCSCCCEEEEEECSSCSS
T ss_pred EEEEEEeccccCCCceEEEEEeccCCCC
Confidence 578999888 455889999999986543
No 191
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.82 E-value=7.7e-19 Score=113.31 Aligned_cols=157 Identities=13% Similarity=0.159 Sum_probs=98.7
Q ss_pred CCCceEEEEECC--Ee---c----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc------eee
Q psy16859 1 YVKPEVIWLRGN--TP---L----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG------YTE 59 (168)
Q Consensus 1 ~p~p~v~W~~~~--~~---~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~------~~~ 59 (168)
.|.+.|.|||.. .. + .....|+.+.....+..+|.|.+++.+|+|.|.|.+.+..+ ...
T Consensus 28 ~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~ 107 (245)
T 3nfj_J 28 TSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFYLCAWSVSVGAGVPTIYFG 107 (245)
T ss_dssp CSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEECCTTTSSCCCEEC
T ss_pred CCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEEEEEEeeccCCCceeEEEC
Confidence 377899999921 10 0 11235676665335677999999999999999999998322 222
Q ss_pred EEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcE---EE----
Q psy16859 60 TFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTM---TE---- 130 (168)
Q Consensus 60 ~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~---~~---- 130 (168)
....|.|..... ...+|.+...+.....+..|+.+.|.|.+.+. |.+ .+.|++++..+....... ..
T Consensus 108 ~~~~l~V~~~~~----~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~ 183 (245)
T 3nfj_J 108 EGSWLTVVEDLN----KVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPA 183 (245)
T ss_dssp CCEEEEEESCGG----GCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSSS
T ss_pred CCeEEEEEcccC----CCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEECCCCccccccccccccc
Confidence 345677753110 01234443322234445569999999999884 444 689999998876432110 00
Q ss_pred -ecCC---EEEEEEccCCCCC-CeeEEEEEEcCCce
Q psy16859 131 -TVND---YVRLTLKRATDDE-NGTYFIVARNIYGS 161 (168)
Q Consensus 131 -~~~~---~~~l~i~~~~~~d-~g~y~C~~~n~~g~ 161 (168)
.... ...|.|.....+| .|.|+|.|.|....
T Consensus 184 ~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~ 219 (245)
T 3nfj_J 184 LNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp STTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCC
Confidence 0111 1467888877777 67999999997654
No 192
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.82 E-value=3.4e-20 Score=117.80 Aligned_cols=150 Identities=15% Similarity=0.201 Sum_probs=90.8
Q ss_pred ceEEEEECCEecCCCCCceEEEecCC----CEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 4 PEVIWLRGNTPLPKSSPRFKYIEDSN----NLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 4 p~v~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
+.|.|+|++..+.... ........+ ...+|.|.+++.+|+|.|+|.+.|..+.......+... .. ...+
T Consensus 45 ~~v~W~k~~~~~~~~~-~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~-~~-----~~~~ 117 (218)
T 2rgs_A 45 VQISWFVNNVEVHTAQ-TQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPSPIERTISKI-KG-----LVRA 117 (218)
T ss_dssp EEEEEEETTEEECCCE-EEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCSSCEEEEECCC-CC-----CCBC
T ss_pred eEEEEEECCccccCcc-cccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCCCcceEEEeec-CC-----CCCC
Confidence 8999999998773221 111111101 13479999999999999999999876543222222110 00 1234
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcEE-EecCC-E---EEEEEccCCCCCCeeEE
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTMT-ETVND-Y---VRLTLKRATDDENGTYF 152 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~~-~~~~~-~---~~l~i~~~~~~d~g~y~ 152 (168)
|.+...+..... ..|+.+.|.|.+.| .|.+ .+.|++++..+........ ..... . ..|.+....++|.|.|+
T Consensus 118 P~v~~~~~~~~~-~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~Yt 196 (218)
T 2rgs_A 118 PQVYILPPPAEQ-LSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFS 196 (218)
T ss_dssp CEEEEECCCGGG-TTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEE
T ss_pred CEEEEECCChHH-hcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEE
Confidence 555444422222 35899999999998 6765 8999999987643211111 11111 1 23555555556799999
Q ss_pred EEEEcCCce
Q psy16859 153 IVARNIYGS 161 (168)
Q Consensus 153 C~~~n~~g~ 161 (168)
|.|.|....
T Consensus 197 C~a~n~~l~ 205 (218)
T 2rgs_A 197 CNVRHEGLK 205 (218)
T ss_dssp EEEECTTSG
T ss_pred EEEEcCCCC
Confidence 999998654
No 193
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.82 E-value=1.4e-18 Score=121.02 Aligned_cols=147 Identities=13% Similarity=0.158 Sum_probs=98.9
Q ss_pred CCCc---eEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee--------EEEEEEEEec
Q psy16859 1 YVKP---EVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE--------TFARVDVINV 69 (168)
Q Consensus 1 ~p~p---~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~--------~~~~l~v~~~ 69 (168)
+|+| +|.|+|++..+.... . ... ....+|.|.+++.+|+|.|+|.+.|..|... ....+.|...
T Consensus 113 ~~~~~~~~v~W~k~g~~l~~~~-~---~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~ 187 (450)
T 1z7z_I 113 GAPRANLTVVLLRGEKELKREP-A---VGE-PAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVL 187 (450)
T ss_dssp CBCGGGEEEEEEETTEEEEEEE-C---CTT-TEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCC
T ss_pred CCCCcCcEEEEeeCCEEeeccc-c---ccc-ccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeecc
Confidence 3566 999999998873211 1 112 3345899999999999999999999866432 1233444221
Q ss_pred cCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-C--CCeEEEeeCCEeccCCCCcEEEecCCEEEEE-EccCCC
Q psy16859 70 SSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-P--KPKVTWMKGIKDITTSSRTMTETVNDYVRLT-LKRATD 145 (168)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p--~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~-i~~~~~ 145 (168)
+ ..+|.+.. ...+..|+.+.|.|.+.+. | .+.+.|++++..+.. +. ....+...+. ..++..
T Consensus 188 ~------~~~p~~~~----~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~--~~--~~~~~~~~~~~~~~v~~ 253 (450)
T 1z7z_I 188 P------ATPPQLVS----PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--TV--TYGNDSFSAKASVSVTA 253 (450)
T ss_dssp C------SSCCEEEC----CSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC--EE--EEETTEEEEEEEEECCG
T ss_pred C------CCCCEecC----ceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc--eE--EecCCceeEEEEEEeEh
Confidence 1 12232221 1568899999999999998 6 688999999988765 11 2222222221 226789
Q ss_pred CCCe--eEEEEEEcCCceeeEEE
Q psy16859 146 DENG--TYFIVARNIYGSDRAFV 166 (168)
Q Consensus 146 ~d~g--~y~C~~~n~~g~~~~~~ 166 (168)
+|.| .|+|.+.|..|.....+
T Consensus 254 ~d~G~~~Y~C~a~n~~g~~~~~~ 276 (450)
T 1z7z_I 254 EDEGTQRLTCAVILGNQSQETLQ 276 (450)
T ss_dssp GGCEEEEEEEEEEETTEEEEEEE
T ss_pred hhCCcEEEEEEEccCCccEEEEE
Confidence 9999 99999999988775443
No 194
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.82 E-value=6.9e-18 Score=108.12 Aligned_cols=141 Identities=16% Similarity=0.141 Sum_probs=88.2
Q ss_pred CCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEccc--ce----eeEEEEEEEEeccCCCcccCCCCeEE-ecCCcce
Q psy16859 19 SPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEY--GY----TETFARVDVINVSSGAVKHEKPAMFL-TRPDTMM 90 (168)
Q Consensus 19 ~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~--~~----~~~~~~l~v~~~~~~~~~~~~~~~~~-~~~~~~~ 90 (168)
..|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+.. +. ......|.|...+ ..+|.+. ..+. .
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~------~~~P~v~~~~p~--~ 135 (232)
T 1dn0_B 64 KSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGS------ASAPTLFPLVSC--E 135 (232)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSC------CBCCEEEEEECC---
T ss_pred CCeEEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCC------CCCCceEEeccc--c
Confidence 357776653 2457799999999999999999998421 11 1224567775311 1233333 3332 2
Q ss_pred EeecC-CeEEEEEEEccC-CCC-eEEEee-CCEeccCCCCc-EEEecCC---EEEEEEccCCC--CCCeeEEEEEEcCCc
Q psy16859 91 SVALG-EDISFSFRLAGS-PKP-KVTWMK-GIKDITTSSRT-MTETVND---YVRLTLKRATD--DENGTYFIVARNIYG 160 (168)
Q Consensus 91 ~~~~g-~~~~l~C~~~~~-p~~-~~~W~~-~~~~~~~~~~~-~~~~~~~---~~~l~i~~~~~--~d~g~y~C~~~n~~g 160 (168)
.+..| ..++|.|.+.+. |.+ .+.|++ ++..+...... .....+. .+.|.|..... +|.|.|+|.+.|..+
T Consensus 136 ~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~ 215 (232)
T 1dn0_B 136 NSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNG 215 (232)
T ss_dssp -----CCSEEEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTC
T ss_pred ccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCC
Confidence 24477 899999999875 766 899999 88766431000 0001111 24688888887 789999999999998
Q ss_pred eeeEEEE
Q psy16859 161 SDRAFVT 167 (168)
Q Consensus 161 ~~~~~~~ 167 (168)
.......
T Consensus 216 ~~~~~~~ 222 (232)
T 1dn0_B 216 NKEKNVP 222 (232)
T ss_dssp CEEEEEE
T ss_pred CcceeEe
Confidence 8665443
No 195
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.82 E-value=5e-19 Score=116.41 Aligned_cols=138 Identities=14% Similarity=0.181 Sum_probs=89.5
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcc---------cceeeEEEEEEEEeccCCC-----cccCCCCeEEe
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNE---------YGYTETFARVDVINVSSGA-----VKHEKPAMFLT 84 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~---------~~~~~~~~~l~v~~~~~~~-----~~~~~~~~~~~ 84 (168)
.|+.+..+ .....+|.|.+++.+|+|.|.|.+.+. .........|.|...+... .....++.+..
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~ 145 (280)
T 3fku_X 66 GRVTITADQSTRTAYMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQ 145 (280)
T ss_dssp TTCEEEEETTTTEEEEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBC
T ss_pred CcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEe
Confidence 46766632 256679999999999999999999886 1112224456664300000 00011333333
Q ss_pred cCCcceEeecCCeEEEEEEEcc-CC-CCeEEEeeC--CEecc------------CCCCcEEEecCCEEEEEEccCCCCCC
Q psy16859 85 RPDTMMSVALGEDISFSFRLAG-SP-KPKVTWMKG--IKDIT------------TSSRTMTETVNDYVRLTLKRATDDEN 148 (168)
Q Consensus 85 ~~~~~~~~~~g~~~~l~C~~~~-~p-~~~~~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~ 148 (168)
.+ . ..+.+|++++|.|.+.+ .+ .+.+.|++. +..+. ...++.........+|.|.+++.+|+
T Consensus 146 ~p-~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 223 (280)
T 3fku_X 146 PP-S-VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDE 223 (280)
T ss_dssp CS-E-EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred CC-c-EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHC
Confidence 33 3 78889999999999987 44 478999873 22111 12344444445557899999999999
Q ss_pred eeEEEEEEcCC
Q psy16859 149 GTYFIVARNIY 159 (168)
Q Consensus 149 g~y~C~~~n~~ 159 (168)
|.|+|.+.|..
T Consensus 224 G~Y~C~~~~~~ 234 (280)
T 3fku_X 224 ADYYCSTWDSS 234 (280)
T ss_dssp SEEEEEEEETT
T ss_pred EEEEEEEecCC
Confidence 99999999876
No 196
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.81 E-value=3.5e-19 Score=117.47 Aligned_cols=130 Identities=17% Similarity=0.116 Sum_probs=95.5
Q ss_pred eEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEe
Q psy16859 5 EVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLT 84 (168)
Q Consensus 5 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~ 84 (168)
.+.|++++..+ .. .... + .+|.|.+++.+|+|.|+|.+.| |. ...+.|.|..++ ..+ .
T Consensus 39 ~i~W~~~~~~~-----~~-~~~~-~--~~L~i~~~~~~d~G~Y~C~~~n--g~-~~~~~l~V~~~~---------~~~-~ 96 (290)
T 2o26_X 39 FVRWTFKTYFN-----EM-VENK-K--NEWIQEKAEATRTGTYTCSNSN--GL-TSSIYVFVRDPA---------KLF-L 96 (290)
T ss_dssp EEEEEEECSSS-----CE-EEEC-S--SEEEETTCCGGGCEEEEEEESS--SC-EEEEEEEEECSS---------CCB-C
T ss_pred cEEEecCCcce-----ee-ecCC-C--ceEEEeccCHHhCeEEEEEeeC--Cc-cEEEEEEEeCCC---------ccc-c
Confidence 68999998866 11 1112 2 4899999999999999999998 43 556777775422 122 2
Q ss_pred cCCcceEeecCCeEEEEEEEccCCC-CeEEEe-eCCEeccCCCCcEEEecCCEEEEEEccCCCCCCe-eEEEEEEcCCce
Q psy16859 85 RPDTMMSVALGEDISFSFRLAGSPK-PKVTWM-KGIKDITTSSRTMTETVNDYVRLTLKRATDDENG-TYFIVARNIYGS 161 (168)
Q Consensus 85 ~~~~~~~~~~g~~~~l~C~~~~~p~-~~~~W~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~y~C~~~n~~g~ 161 (168)
.+ ....+.+|+.+.|.|.+.+ |. +.+.|+ +++..+....++..... ..|.|.++..+|.| .|+|.+.|..|.
T Consensus 97 ~~-~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~---~~L~i~~v~~~d~G~~Y~C~a~n~~~~ 171 (290)
T 2o26_X 97 VG-LPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPK---AGITIKNVKRAYHRLCVRCAAQRDGTW 171 (290)
T ss_dssp CC-CCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETT---TEEEEESCCGGGTTCEEEEEEEETTEE
T ss_pred cc-cceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCC---CCEEEecccHHHCCCEEEEEEEECCce
Confidence 33 4567889999999999986 77 889995 67777655433332222 26999999999999 999999998665
No 197
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.81 E-value=1.3e-19 Score=114.18 Aligned_cols=151 Identities=11% Similarity=0.142 Sum_probs=91.1
Q ss_pred ceEEEEECCEecCCCCCceEEEecC---CCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 4 PEVIWLRGNTPLPKSSPRFKYIEDS---NNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 4 p~v~W~~~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
+.|.|++++..+............. .....|.|.+++.+|+|.|+|.+.+..+.......+.+.. . ...+|
T Consensus 37 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~~~~-~-----~~~~P 110 (207)
T 2vol_A 37 VQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTK-G-----RPKAP 110 (207)
T ss_dssp CEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSSCEEEEECCCC-C-----CCBCC
T ss_pred eEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCCceEEEeccCC-C-----CCcCC
Confidence 4999999997763211000000010 0124799999999999999999999876532222222100 0 02345
Q ss_pred eEEecCCcceEeecCCeEEEEEEEcc-CCC-CeEEEeeCCEeccCCCCcE-EEecCC-E---EEEEEccCCCCCCeeEEE
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAG-SPK-PKVTWMKGIKDITTSSRTM-TETVND-Y---VRLTLKRATDDENGTYFI 153 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~-~~~~W~~~~~~~~~~~~~~-~~~~~~-~---~~l~i~~~~~~d~g~y~C 153 (168)
.+...+.... ...|+.+.|.|.+.| .|. +.+.|++++..+....... ...... . ..|.+....++|.|.|+|
T Consensus 111 ~v~~~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC 189 (207)
T 2vol_A 111 QVYTLPPPKE-QMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTC 189 (207)
T ss_dssp EEEEECCCTG-GGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEE
T ss_pred eEEEeCCCHH-HhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEE
Confidence 5544332222 235899999999998 454 4899999998775322111 111111 1 346666666678999999
Q ss_pred EEEcCCce
Q psy16859 154 VARNIYGS 161 (168)
Q Consensus 154 ~~~n~~g~ 161 (168)
.|.|....
T Consensus 190 ~a~n~~l~ 197 (207)
T 2vol_A 190 SVLHEGLH 197 (207)
T ss_dssp EEECTTSG
T ss_pred EEECCCCC
Confidence 99998653
No 198
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.81 E-value=2.2e-19 Score=118.27 Aligned_cols=138 Identities=15% Similarity=0.169 Sum_probs=95.3
Q ss_pred eEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEe
Q psy16859 5 EVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLT 84 (168)
Q Consensus 5 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~ 84 (168)
.+.|++++... ...... ....+|.|.+++.+|+|.|+|.+.+..+.....+.|.|..+ +..+..
T Consensus 31 ~v~W~~~~~~~------~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~---------~~~~~~ 94 (289)
T 3ejj_X 31 SVEWDGPISPY------WTLDPE-SPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDP---------AHSWNL 94 (289)
T ss_dssp CCEEECSCSSS------SEECCC-SSCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECCS---------SCSEEE
T ss_pred cEEEccCCCce------EEEecc-CCccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCC---------Ccceec
Confidence 47899765432 111111 23358999999999999999999988777777788888432 212344
Q ss_pred cCCcceEeecCCeEEEEEEEccCCCCe-EEEee-CCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE-cCCce
Q psy16859 85 RPDTMMSVALGEDISFSFRLAGSPKPK-VTWMK-GIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR-NIYGS 161 (168)
Q Consensus 85 ~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~-n~~g~ 161 (168)
.+ ....+..|+.+.|.|.+.+.+.+. +.|++ ++..+....++..... ..|.|.++..+|.|.|+|.+. |..+.
T Consensus 95 ~~-~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~~~~~~~ 170 (289)
T 3ejj_X 95 LA-QEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPW---RGFIIRKAKVLDSNTYVCKTMVNGRES 170 (289)
T ss_dssp SC-SEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETT---TEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred cc-ceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCC---CCEEEeecccccCEEEEEEEEeCCCcc
Confidence 44 577889999999999999877665 99985 6666655444443322 269999999999999999999 54444
Q ss_pred e
Q psy16859 162 D 162 (168)
Q Consensus 162 ~ 162 (168)
.
T Consensus 171 ~ 171 (289)
T 3ejj_X 171 T 171 (289)
T ss_dssp E
T ss_pred c
Confidence 3
No 199
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.81 E-value=1.6e-18 Score=113.25 Aligned_cols=153 Identities=18% Similarity=0.251 Sum_probs=95.5
Q ss_pred CceEEEEECC--Ee---cC--------CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee-EEEEEEEEe
Q psy16859 3 KPEVIWLRGN--TP---LP--------KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE-TFARVDVIN 68 (168)
Q Consensus 3 ~p~v~W~~~~--~~---~~--------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~ 68 (168)
.+.+.||++. .. +. ....|+.+... .+..+|+|.+++.+|+|.|.|.+.+..+... ....|.|..
T Consensus 49 ~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~ 127 (268)
T 1x9q_A 49 NTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGS-GTDFTLKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKS 127 (268)
T ss_dssp CBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE-TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEC---
T ss_pred CceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcC-CCEEEEEECCCChhHCEEEEEEEecCCCceEcCCEEEEEcc
Confidence 5899999853 21 10 12457776654 5667999999999999999999998754322 234566644
Q ss_pred ccCCCcccCCCC--------------eEEecCCcceEeecCCeEEEEEEEccCCC--CeEEEeeCC--Eec---------
Q psy16859 69 VSSGAVKHEKPA--------------MFLTRPDTMMSVALGEDISFSFRLAGSPK--PKVTWMKGI--KDI--------- 121 (168)
Q Consensus 69 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~~--~~~--------- 121 (168)
.+... ....|| .....+ ....+.+|+.++|.|.+.+.+. +.+.|+++. ..+
T Consensus 128 ~~~~~-~p~~pp~~~~~~~~~~~~~~v~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~ 205 (268)
T 1x9q_A 128 SADDA-KKDAAKKDDAKKDDAKKDGGVKLDET-GGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNK 205 (268)
T ss_dssp ----------------------CGGGCEEEEE-CCEEECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCG
T ss_pred CccCC-CccccccccccccccccccceEEECC-CceEecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEccc
Confidence 32100 000011 122223 3567889999999999988663 789999742 111
Q ss_pred ----------cCCCCcEEEec--CCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 122 ----------TTSSRTMTETV--NDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 122 ----------~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
....++..... ....+|.|.+++.+|+|.|+|.+.|.
T Consensus 206 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 206 PYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp GGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred ccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 01223333221 23468999999999999999999975
No 200
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.81 E-value=2.4e-18 Score=109.05 Aligned_cols=155 Identities=18% Similarity=0.251 Sum_probs=95.8
Q ss_pred CceEEEEECC--EecC---------------CCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccce---eeEE
Q psy16859 3 KPEVIWLRGN--TPLP---------------KSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGY---TETF 61 (168)
Q Consensus 3 ~p~v~W~~~~--~~~~---------------~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~ 61 (168)
.+.|.||++. ..+. ....|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+..+. ....
T Consensus 31 ~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~ 110 (215)
T 1c5d_H 31 TNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTEDTAIYFCTREDGWNYFDYWGPG 110 (215)
T ss_dssp SCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGGCEEEEEEECCSSSCSCCBCCC
T ss_pred CCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCcccCEEEEEEEecCCcccceEcCC
Confidence 5789999853 2110 12357776643 245679999999999999999999886421 1223
Q ss_pred EEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcEEEecCCE---E
Q psy16859 62 ARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTMTETVNDY---V 136 (168)
Q Consensus 62 ~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~~~---~ 136 (168)
+.|.|..... ..|......+. ..+..|..+.|.|.+.+. |.+ .+.|++++..+...........+.. +
T Consensus 111 ~~L~V~~~~~-----~~P~i~~~~~~--~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s 183 (215)
T 1c5d_H 111 TMVTVSSAQT-----TAPSVYPLAPG--CGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVHTFPAVLQSGLYTLTS 183 (215)
T ss_dssp EEEEECSSCC-----BCCCEEEECCC--SSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCSCCBCCCEEETTEEEEEE
T ss_pred EEEEecCCCC-----CCCeEEeccCC--hhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCceEecCcccCCCCEEEEE
Confidence 5677753211 12333333332 235689999999999985 777 8999998764332111111111111 1
Q ss_pred EEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 137 RLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 137 ~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
.|. ....++ |.|+|.|.|..|.......
T Consensus 184 ~L~--~~~~~~-g~ytC~v~n~~~~~~~~~~ 211 (215)
T 1c5d_H 184 SVT--SSTWPS-QTVTCNVAHPASSTKVDKK 211 (215)
T ss_dssp EEE--ESSTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred EEe--cccCCC-CeEEEEEEeCCCCccEEEe
Confidence 233 444456 9999999999887665443
No 201
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.81 E-value=4.4e-20 Score=123.65 Aligned_cols=153 Identities=16% Similarity=0.175 Sum_probs=95.0
Q ss_pred CC-CceEEEEECCEecCCCCCceEEEecCCC----EEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcc
Q psy16859 1 YV-KPEVIWLRGNTPLPKSSPRFKYIEDSNN----LHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVK 75 (168)
Q Consensus 1 ~p-~p~v~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~ 75 (168)
|| .++|.|+|+|..+............ ++ ...|.|.++..+|+|.|+|.+.|..+.....+.+.+...
T Consensus 37 ~P~~~~v~W~k~g~~l~~~~~~~~~~~~-~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~~~~~------ 109 (323)
T 2wqr_A 37 TPGTIQITWLEDGQVMDVDLSTASTTQE-GELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCADSN------ 109 (323)
T ss_dssp CCCCEEEEEEETTEECCGGGEEEEEEEE-TTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECCCCCSS------
T ss_pred ECCCeEEEEEECCEEcccceecCCcCcc-CCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeecCCCCC------
Confidence 45 4799999999988422111111111 22 235788888888999999999987665433322111000
Q ss_pred cCCCCeEEecCCcceEeecCCeEEEEEEEccC-CCC---eEEEeeCC-EeccCCCCcEEEecC----CEEEEEEccCCCC
Q psy16859 76 HEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PKP---KVTWMKGI-KDITTSSRTMTETVN----DYVRLTLKRATDD 146 (168)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~---~~~W~~~~-~~~~~~~~~~~~~~~----~~~~l~i~~~~~~ 146 (168)
...+..+...| ....+..|+.+.|.|.+.+. |.+ .+.|++++ ..+............ ..+.|.|.++..+
T Consensus 110 ~~~p~v~~~~p-~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~ 188 (323)
T 2wqr_A 110 PRGVSAYLSRP-SPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWI 188 (323)
T ss_dssp GGGCEEEECCC-CHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHH
T ss_pred CCCCEEEEcCC-CHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHcc
Confidence 01232333334 44557789999999999875 555 89999964 433322111110111 2347999999999
Q ss_pred CCeeEEEEEEcCCce
Q psy16859 147 ENGTYFIVARNIYGS 161 (168)
Q Consensus 147 d~g~y~C~~~n~~g~ 161 (168)
|.|.|+|.|.|..+.
T Consensus 189 D~G~Y~C~a~n~~~~ 203 (323)
T 2wqr_A 189 EGETYQCRVTHPHLP 203 (323)
T ss_dssp TTCCEEEEEECTTSS
T ss_pred CCCCEEEEEECCCCC
Confidence 999999999998643
No 202
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.81 E-value=2.2e-19 Score=125.04 Aligned_cols=134 Identities=16% Similarity=0.178 Sum_probs=99.5
Q ss_pred CCceE-----EEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCccc
Q psy16859 2 VKPEV-----IWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKH 76 (168)
Q Consensus 2 p~p~v-----~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~ 76 (168)
|.|.+ .|+|++..+. + .....|.|.+++. |+| |+|.+.+..+.....+.|.|..
T Consensus 26 p~p~~~~~~~~w~k~~~~~~--~---------~~~~~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~~l~V~~-------- 84 (450)
T 1z7z_I 26 DQPMLLGIETPLPKKELLLP--G---------NNRKVYELSNVQE-DSQ-PMCYSNCPDGQSTAKTFLTVYW-------- 84 (450)
T ss_dssp SCCCEEEECSSSCEEECCSS--T---------TTEEEEEEEEECS-CBC-CEEEEEETTEEEEEECEEEEEB--------
T ss_pred CCcccccccceeeecceEec--C---------CCceEEEEEeccc-CCe-eEEEEeCCCCcceeEEEEEEEe--------
Confidence 56777 8998876552 1 1223789999987 999 9999986656566677788853
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCC---eEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKP---KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~---~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
.|..+...+ ....+.+|+.+.|.|.+.+.|++ .+.|++++..+...... .......|.|..+..+|.|.|+|
T Consensus 85 -~P~~~~~~~-~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~---~~~~~~~L~i~~~~~~d~G~Y~C 159 (450)
T 1z7z_I 85 -TPERVELAP-LPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV---GEPAEVTTTVLVRRDHHGANFSC 159 (450)
T ss_dssp -CCSEEEECC-CCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECC---TTTEEEEEEEECCSSCSSCEEEE
T ss_pred -CCCcceecC-CCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeeccccc---ccccceEEEEEeeccccCceEEE
Confidence 233443444 45678899999999999998887 89999999877543211 12223589999999999999999
Q ss_pred EEEcCCce
Q psy16859 154 VARNIYGS 161 (168)
Q Consensus 154 ~~~n~~g~ 161 (168)
.|.|..|.
T Consensus 160 ~a~n~~g~ 167 (450)
T 1z7z_I 160 RTELDLRP 167 (450)
T ss_dssp EEEEECGG
T ss_pred EEEcccCC
Confidence 99998774
No 203
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.80 E-value=8.6e-19 Score=111.00 Aligned_cols=145 Identities=16% Similarity=0.172 Sum_probs=101.0
Q ss_pred CCCceEEEEECCEecCCCC-CceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSS-PRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
+|.|.+.|++++..+.... .++.+... ....+|.|.+++.+|+|.|+|.+.|..|.....+.|.|..++. +
T Consensus 45 ~p~p~i~W~~~g~~l~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~P~-------~ 116 (215)
T 3mtr_A 45 YPSATISWFRDGQLLPSSNYSNIKIYNT-PSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPS-------S 116 (215)
T ss_dssp ESCCEEEEEETTEESSCSSSCSEEEEEE-TTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEECCCCC-------C
T ss_pred cCCCEEEEEECCeECCCCCCccEEEecC-CCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEEECCCCC-------C
Confidence 4889999999999985432 56666655 5567999999999999999999999999888888888854332 2
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEc----cCCCC--eEEEeeCCEeccCCCCcEEEe--c--CCEEEEEEccCCCCCCe
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLA----GSPKP--KVTWMKGIKDITTSSRTMTET--V--NDYVRLTLKRATDDENG 149 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~----~~p~~--~~~W~~~~~~~~~~~~~~~~~--~--~~~~~l~i~~~~~~d~g 149 (168)
|... .....+..+.|.|... +.|.. .+.|..++... ...... . .....+.|.++...+.|
T Consensus 117 p~~~------~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~----w~~~~~~~~~~~~~~~l~i~~L~~~~~y 186 (215)
T 3mtr_A 117 PSID------QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEV----WHSKWYDAKEASMEGIVTIVGLKPETTY 186 (215)
T ss_dssp CEEE------EEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCC----CEEEEEEHHHHHHHTEEEEECCCTTCEE
T ss_pred Ccce------EEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCc----ccccccccccccccccEEECCCCCCCEE
Confidence 2211 1123466788888743 22333 37787765421 111110 0 01147899999999999
Q ss_pred eEEEEEEcCCceee
Q psy16859 150 TYFIVARNIYGSDR 163 (168)
Q Consensus 150 ~y~C~~~n~~g~~~ 163 (168)
.|+|.|.|..|...
T Consensus 187 ~~~~~A~N~~G~s~ 200 (215)
T 3mtr_A 187 AVRLAALNGKGLGE 200 (215)
T ss_dssp EEEEEEEESSCBCC
T ss_pred EEEEEEEeCCcccC
Confidence 99999999998764
No 204
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.80 E-value=2.8e-18 Score=111.77 Aligned_cols=154 Identities=14% Similarity=0.151 Sum_probs=96.9
Q ss_pred CceEEEEECC--Eec------C----------CCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccc-e--eeE
Q psy16859 3 KPEVIWLRGN--TPL------P----------KSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYG-Y--TET 60 (168)
Q Consensus 3 ~p~v~W~~~~--~~~------~----------~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-~--~~~ 60 (168)
.+.|.|||+. ..+ . ....|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+..+ . ...
T Consensus 37 ~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~ 116 (261)
T 2xqy_G 37 SYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTSEDSAVYYCGRLGYVYGFDYWGQ 116 (261)
T ss_dssp GSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECC
T ss_pred CceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCcccCeEEEEEEecCCCcceEECC
Confidence 5789999863 211 0 01357776543 24567899999999999999999998542 1 112
Q ss_pred EEEEEEEeccCCCcccCCCCeEE-ecCCcceEeecCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcEEEecC---C
Q psy16859 61 FARVDVINVSSGAVKHEKPAMFL-TRPDTMMSVALGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTMTETVN---D 134 (168)
Q Consensus 61 ~~~l~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~---~ 134 (168)
.+.|.|.... ..+|.+. ..+. ..+..|..++|.|.+.+. |.+ .+.|++++..+............ .
T Consensus 117 ~~~L~V~~~~------~~~P~v~~~~p~--~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~g~~~~ 188 (261)
T 2xqy_G 117 GTTLTVSSAK------TTAPSVYPLAPV--CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTL 188 (261)
T ss_dssp CEEEEECSSC------CBCCEEEEECCC--CC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEE
T ss_pred CEEEEEccCC------CCCCeEEEeCCC--ccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcCceEecCceecCCcEEE
Confidence 3567774311 1233333 3332 235679999999999874 766 89999987654311100111111 1
Q ss_pred EEEEEEccCCCCCCeeEEEEEEcCCceeeEE
Q psy16859 135 YVRLTLKRATDDENGTYFIVARNIYGSDRAF 165 (168)
Q Consensus 135 ~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 165 (168)
.+.|.|.....+| |.|+|.|.|........
T Consensus 189 ~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~ 218 (261)
T 2xqy_G 189 SSSVTVTSSTWPS-QSITCNVAHPASSTKVD 218 (261)
T ss_dssp EEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred EEEEEEeccccCC-CEEEEEEEECCCCccEE
Confidence 2568898888888 99999999976654433
No 205
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.80 E-value=9.5e-19 Score=113.80 Aligned_cols=128 Identities=15% Similarity=0.222 Sum_probs=82.6
Q ss_pred CCEEEEEEcCCCCCCCeEEEEEEEcccc---eeeEEEEEEEEeccCCCc-------ccCCCCeEEecCCcceEeecCCeE
Q psy16859 29 NNLHTLILSGVTAEEAGKYTCRVSNEYG---YTETFARVDVINVSSGAV-------KHEKPAMFLTRPDTMMSVALGEDI 98 (168)
Q Consensus 29 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~~l~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~~ 98 (168)
....+|.|.+++.+|+|.|.|.+.+..+ .......|.|......+. ....++.+...+ ..+.+.+|+.+
T Consensus 76 ~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p-~~~~v~~G~~v 154 (259)
T 3omz_A 76 RKNLRMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQ-SSVSMPVRKAV 154 (259)
T ss_dssp -CCCEEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCC-CCEEEETTCCE
T ss_pred CCeEEEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeC-CEEEEcCCCCE
Confidence 3445799999999999999999998765 223346677754321000 000023444444 56788999999
Q ss_pred EEEEEEccC-CCCeEEEeeCCE--ecc------------CCCCcEEE--ecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 99 SFSFRLAGS-PKPKVTWMKGIK--DIT------------TSSRTMTE--TVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 99 ~l~C~~~~~-p~~~~~W~~~~~--~~~------------~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
+|.|.+.+. +.+.+.|++... .+. ...++... ......+|.|.+++.+|+|.|+|.+.+
T Consensus 155 ~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 155 TLNCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGE 230 (259)
T ss_dssp EECCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEES
T ss_pred EEEEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeC
Confidence 999998874 788999997431 110 01122221 112235699999999999999999985
No 206
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.80 E-value=1.2e-18 Score=116.17 Aligned_cols=147 Identities=13% Similarity=0.155 Sum_probs=95.0
Q ss_pred eEEEEECCEecC------------CCCCceEEEec----CCCEEEEEEcCCCCCCCeEEEEEEEcc-cceeeEEEEEEEE
Q psy16859 5 EVIWLRGNTPLP------------KSSPRFKYIED----SNNLHTLILSGVTAEEAGKYTCRVSNE-YGYTETFARVDVI 67 (168)
Q Consensus 5 ~v~W~~~~~~~~------------~~~~~~~~~~~----~~~~~~l~i~~~~~~d~G~Y~C~~~~~-~~~~~~~~~l~v~ 67 (168)
.|.|+|++.... ....++..... ..+..+|.|.+++.+|+|.|+|.+.+. .+.....+.|.+.
T Consensus 36 ~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~ 115 (313)
T 4fqp_A 36 QLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVL 115 (313)
T ss_dssp EEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGGCEEEEEEEECSSSCEEEEEEEECCB
T ss_pred EEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhhCEEEEEEEeeccCcceeeeeeeeec
Confidence 489999875321 12234433221 122457999999999999999988643 4455555556553
Q ss_pred eccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEc-cCCCCeEEEeeCCEeccCCCCcEEEecCC---EEEEEEccC
Q psy16859 68 NVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLA-GSPKPKVTWMKGIKDITTSSRTMTETVND---YVRLTLKRA 143 (168)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~ 143 (168)
.+|.....+ ....+..+..+.+.|.+. +.|.+.+.|++++..+............. .+.|.+...
T Consensus 116 ----------~~P~~~~~~-~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~ 184 (313)
T 4fqp_A 116 ----------AKPQNTAEV-QKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPS 184 (313)
T ss_dssp ----------BCCEEEEEE-CCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCC
T ss_pred ----------cCCcceecc-cceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecccccccceeeeeccc
Confidence 233333333 234566788889999865 68999999999887654322111111111 145888888
Q ss_pred CCCCCeeEEEEEEcCCcee
Q psy16859 144 TDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 144 ~~~d~g~y~C~~~n~~g~~ 162 (168)
..+|.|.|+|.|.|..+..
T Consensus 185 ~~~d~g~Y~C~a~n~~~~~ 203 (313)
T 4fqp_A 185 SQVDGKNVTCKVEHESFEK 203 (313)
T ss_dssp GGGTTCEEEEEEECTTSSS
T ss_pred ccccCeeEEEEEEccCcCc
Confidence 9999999999999987654
No 207
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.80 E-value=3.6e-18 Score=119.33 Aligned_cols=137 Identities=15% Similarity=0.164 Sum_probs=91.0
Q ss_pred CCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccc------------eeeEEEEEEEEeccCCCcccCCCCeEEec
Q psy16859 19 SPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYG------------YTETFARVDVINVSSGAVKHEKPAMFLTR 85 (168)
Q Consensus 19 ~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~------------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~ 85 (168)
..|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+ .......|.|.... ..+|.+...
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~ 138 (457)
T 1hzh_H 65 QDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSAS------TKGPSVFPL 138 (457)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCC------CBCCEEEEE
T ss_pred cCceEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCC------CCCCeEEec
Confidence 457776543 24567999999999999999999998754 12234567774321 123333332
Q ss_pred CCcceEeecCCeEEEEEEEccC-CC-CeEEEeeCCEeccCCCCcEEEecCC----EEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 86 PDTMMSVALGEDISFSFRLAGS-PK-PKVTWMKGIKDITTSSRTMTETVND----YVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 86 ~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
+. ...+..|+.+.|.|.+.+. |. +.+.|++++..+............. ...|.|..+..+| |.|+|.|.|..
T Consensus 139 ~~-~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~ 216 (457)
T 1hzh_H 139 AP-SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKP 216 (457)
T ss_dssp CC-CSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGG
T ss_pred Cc-cccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCC
Confidence 21 2336789999999999986 64 7899999886543110000111111 1468999999989 99999999987
Q ss_pred ceee
Q psy16859 160 GSDR 163 (168)
Q Consensus 160 g~~~ 163 (168)
+...
T Consensus 217 ~~~~ 220 (457)
T 1hzh_H 217 SNTK 220 (457)
T ss_dssp GTEE
T ss_pred CCcc
Confidence 7644
No 208
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.80 E-value=2.7e-19 Score=124.55 Aligned_cols=151 Identities=11% Similarity=0.144 Sum_probs=93.4
Q ss_pred CceEEEEECCEecCCCCCc-eEEEecC--CCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 3 KPEVIWLRGNTPLPKSSPR-FKYIEDS--NNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 3 ~p~v~W~~~~~~~~~~~~~-~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
.+.|.|++++..+...... ....... ....+|.|.+++.+|+|.|+|.+.|..+.......+.+... ...+
T Consensus 273 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~------~~~~ 346 (444)
T 1igt_B 273 DVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKG------SVRA 346 (444)
T ss_dssp CCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCC------CCBC
T ss_pred CeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCC------CCCC
Confidence 3699999999887432211 1111110 12357999999999999999999998776533333322000 0234
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcEE-EecCC----EEEEEEccCCCCCCeeEE
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTMT-ETVND----YVRLTLKRATDDENGTYF 152 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~~-~~~~~----~~~l~i~~~~~~d~g~y~ 152 (168)
|.+...+.....+. +..+.|.|.+.| .|.+ .+.|++++..+........ ..... ...|.+....++|.|.|+
T Consensus 347 P~v~~~~~~~~~~~-~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Yt 425 (444)
T 1igt_B 347 PQVYVLPPPEEEMT-KKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYS 425 (444)
T ss_dssp CEEEEECCCGGGTT-SSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEE
T ss_pred CEEEEeCCChHHcc-CCeEEEEEEEEeeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEE
Confidence 55544332222233 445999999998 5655 8999999987743211111 11111 134667777777899999
Q ss_pred EEEEcCCc
Q psy16859 153 IVARNIYG 160 (168)
Q Consensus 153 C~~~n~~g 160 (168)
|.|.|..-
T Consensus 426 C~a~n~~l 433 (444)
T 1igt_B 426 CSVVHEGL 433 (444)
T ss_dssp EEEECTTS
T ss_pred EEEECCCc
Confidence 99999753
No 209
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.80 E-value=2.8e-18 Score=111.91 Aligned_cols=132 Identities=20% Similarity=0.228 Sum_probs=93.6
Q ss_pred CCCc--eEEEEECCEecCCCCCceEEEecCCCEEEEEEcCC---CCCCCeE--EEEEEEcccceeeEEEEEEEEeccCCC
Q psy16859 1 YVKP--EVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGV---TAEEAGK--YTCRVSNEYGYTETFARVDVINVSSGA 73 (168)
Q Consensus 1 ~p~p--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d~G~--Y~C~~~~~~~~~~~~~~l~v~~~~~~~ 73 (168)
+|.| ++.|++++..+.. .+... +. .+.+..+ +.+|+|. |+|.+.|..+.....+.|.|...+
T Consensus 31 ~p~p~~~v~W~k~~~~l~~-----~~~~~-~~--~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V~~~p--- 99 (265)
T 2oz4_A 31 FPVSEAQVHLALGDQRLNP-----TVTYG-ND--SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFP--- 99 (265)
T ss_dssp SCGGGCEEEEEETTEECCC-----EEEEC-SS--EEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEEEEECCC---
T ss_pred CCCcceEEEEEeCCEECCc-----eEeeC-CC--eEEEEeecccccccCCcceEEEEEecCCCCcEEEEEEEEeCCC---
Confidence 3666 9999999998842 22222 22 4555444 7788885 999999998887778888885421
Q ss_pred cccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 74 VKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
++.+.. ....+.+|+.+.|.|.+. |.+.+.| ++..+... .....|.+..+..+|.|.|+|
T Consensus 100 -----~p~~~~---~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~--------~~~~~l~i~~~~~~~~g~Y~C 159 (265)
T 2oz4_A 100 -----APNVIL---TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL--------GPRAQLLLKATPEDNGRSFSC 159 (265)
T ss_dssp -----CCEEEE---SCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCC--------SSEECCEEECCGGGTTEEEEE
T ss_pred -----Cceeec---CCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCC--------CCcEEEEEccccccCCceEEE
Confidence 233332 234578899999999997 8899999 66665321 233568888889999999999
Q ss_pred EEEcCC-ceee
Q psy16859 154 VARNIY-GSDR 163 (168)
Q Consensus 154 ~~~n~~-g~~~ 163 (168)
.+.|.. |...
T Consensus 160 ~a~n~~~g~~~ 170 (265)
T 2oz4_A 160 SATLEVAGQLI 170 (265)
T ss_dssp EEEEECSSSEE
T ss_pred EEEcCCCCCcc
Confidence 998644 6543
No 210
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.80 E-value=4.5e-18 Score=118.40 Aligned_cols=136 Identities=18% Similarity=0.229 Sum_probs=90.1
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccce---eeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecC
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGY---TETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALG 95 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 95 (168)
.|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+. ....+.|.|..... ..|..+...+. ..+..|
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~-----~~P~i~~~~~~--~~~~~g 138 (444)
T 1igt_B 66 GRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKT-----TAPSVYPLAPV--CGDTTG 138 (444)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCC-----BCCEEEEECCC--SSCCCS
T ss_pred CceEEEEeCCCCeEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCC-----CCCceeEeccc--ccCCCC
Confidence 47776543 245679999999999999999999987543 12245666642111 12333333442 224789
Q ss_pred CeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcEEEecC---CEEEEEEccCCCCCCeeEEEEEEcCCceee
Q psy16859 96 EDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTMTETVN---DYVRLTLKRATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 96 ~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 163 (168)
+.+.|.|.+.|. |.+ .+.|++++..+...........+ ....|.|..+..+| |.|+|.|.|..|...
T Consensus 139 ~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~ 210 (444)
T 1igt_B 139 SSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK 210 (444)
T ss_dssp SCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEE
T ss_pred CcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcc
Confidence 999999999884 766 89999987653211000001111 12468899999889 999999999988754
No 211
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.79 E-value=6.6e-19 Score=117.94 Aligned_cols=152 Identities=15% Similarity=0.198 Sum_probs=93.1
Q ss_pred CCc---eEEEEECC-EecCCCCCceEEEecCC---CEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCc
Q psy16859 2 VKP---EVIWLRGN-TPLPKSSPRFKYIEDSN---NLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAV 74 (168)
Q Consensus 2 p~p---~v~W~~~~-~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~ 74 (168)
|.| .|.||+++ ..+. ...........+ ....|.|.+++.+|+|.|+|.+.|..+... ..+.|.....
T Consensus 142 P~p~~~~i~W~k~~g~~~~-~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~--~~~~v~~~~~--- 215 (323)
T 2wqr_A 142 PSKGTVQLTWSRASGKPVN-HSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRA--LMRSTTKTSG--- 215 (323)
T ss_dssp CCSSCCEEEEEETTCCCCC-CCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC--EEEEECCCCS---
T ss_pred CCCCceEEEEEECCCcccc-cccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCC--eeeEEEccCC---
Confidence 556 99999975 4442 211111111101 134799999999999999999998753322 2344421100
Q ss_pred ccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCc---EEEecC----CEEEEEEccCCC
Q psy16859 75 KHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRT---MTETVN----DYVRLTLKRATD 145 (168)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~---~~~~~~----~~~~l~i~~~~~ 145 (168)
...+|.+...+.... ...|+.+.|.|.+.| .|.+ .+.|++++..+...... ...... ..+.|.|..+..
T Consensus 216 -~~~~P~v~~~~~~~~-~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~ 293 (323)
T 2wqr_A 216 -PRAAPEVYAFATPEW-PGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEW 293 (323)
T ss_dssp -CCBCCEEEEEECCCC-TTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHH
T ss_pred -CCCCCEEEEeCCChH-HhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHc
Confidence 012444433221111 223999999999988 4443 79999999887643210 001111 125688999999
Q ss_pred CCCeeEEEEEEcCCce
Q psy16859 146 DENGTYFIVARNIYGS 161 (168)
Q Consensus 146 ~d~g~y~C~~~n~~g~ 161 (168)
+|.|.|+|.|.|..+.
T Consensus 294 ~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 294 EQKDEFICRAVHEAAS 309 (323)
T ss_dssp HHCCCEEEEEECTTST
T ss_pred cCCCEEEEEEEeCCCC
Confidence 9999999999998876
No 212
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.79 E-value=1.5e-18 Score=114.00 Aligned_cols=156 Identities=14% Similarity=0.168 Sum_probs=98.7
Q ss_pred CCceEEEEECC--Eec--------------C--CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc------e
Q psy16859 2 VKPEVIWLRGN--TPL--------------P--KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG------Y 57 (168)
Q Consensus 2 p~p~v~W~~~~--~~~--------------~--~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~------~ 57 (168)
|.+.|.||+++ ..+ . ....|+.+..+..+..+|.|.+++.+|+|.|.|.+.+..+ .
T Consensus 52 ~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~ 131 (279)
T 2wbj_D 52 QATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDLTSGANNEQF 131 (279)
T ss_dssp CEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGGCEEEEEEEEETTCBTSCCEE
T ss_pred CCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccCCEEEEEEEcccccCCcccee
Confidence 67899999963 110 0 1235777765435677999999999999999999998321 1
Q ss_pred eeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CC-CeEEEeeCCEeccCCCCcE---EE--
Q psy16859 58 TETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PK-PKVTWMKGIKDITTSSRTM---TE-- 130 (168)
Q Consensus 58 ~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~~~~~~~~~---~~-- 130 (168)
......|.|..... ...+|.+...+.....+..|+.+.|.|.+.+. |. +.+.|++++..+....... ..
T Consensus 132 ~~~~~~l~V~~~~~----~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~ 207 (279)
T 2wbj_D 132 FGPGTRLTVTEDLK----NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQ 207 (279)
T ss_dssp ECCCEEEEEESCGG----GCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEETTEECCTTEEECSSCEESS
T ss_pred eCCCEEEEEecCCC----CCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEECCEECCCCccccccccccc
Confidence 12235677754210 01244444332233345578999999999986 43 6899999998775432110 00
Q ss_pred ---ecCC---EEEEEEccCCCCC-CeeEEEEEEcCCce
Q psy16859 131 ---TVND---YVRLTLKRATDDE-NGTYFIVARNIYGS 161 (168)
Q Consensus 131 ---~~~~---~~~l~i~~~~~~d-~g~y~C~~~n~~g~ 161 (168)
.... ...|.|......| .|.|+|.|.|....
T Consensus 208 ~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 208 PALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 245 (279)
T ss_dssp TTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBC
T ss_pred ccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCC
Confidence 0111 1357787777765 67899999997654
No 213
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.79 E-value=1.2e-17 Score=123.00 Aligned_cols=153 Identities=11% Similarity=0.104 Sum_probs=99.3
Q ss_pred CCceEEEEEC--CEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEE-EEEEEEeccCCCcccCC
Q psy16859 2 VKPEVIWLRG--NTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETF-ARVDVINVSSGAVKHEK 78 (168)
Q Consensus 2 p~p~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~-~~l~v~~~~~~~~~~~~ 78 (168)
|.+.+.|+++ +..+.......... . .. .|.|.+++.+|.|.|+|.+.+........ ..+.+.. ..
T Consensus 155 p~~~v~w~~~~~~~~~~~~~~~~~~~-~-~~--~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~--------~~ 222 (772)
T 3v2a_R 155 SNLNVSLCARYPEKRFVPDGNRISWD-S-KK--GFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVG--------YR 222 (772)
T ss_dssp SSCCEEEEEETTTEEECCCSSSCEEE-T-TT--EEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEEC--------CC
T ss_pred CCcEEEEEecCCCccccCCCceeecC-C-CC--CeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEec--------Cc
Confidence 6789999997 66553333333322 2 22 69999999999999999999764433332 3333321 12
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEcc--CCCCeEEEeeCCEeccCCCCcEEE--------ecCCEEEEEEccCCCCCC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAG--SPKPKVTWMKGIKDITTSSRTMTE--------TVNDYVRLTLKRATDDEN 148 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~--~p~~~~~W~~~~~~~~~~~~~~~~--------~~~~~~~l~i~~~~~~d~ 148 (168)
++.+...+.....+..|+.+.|.|.+.+ .+.+.+.|++++..+......... .......|.|.++..+|+
T Consensus 223 ~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 302 (772)
T 3v2a_R 223 IYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQ 302 (772)
T ss_dssp EEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTC
T ss_pred cceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCC
Confidence 3334444544568899999999999987 456689999988765443222111 011235799999999999
Q ss_pred eeEEEEEEcCCceeeEEE
Q psy16859 149 GTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 149 g~y~C~~~n~~g~~~~~~ 166 (168)
|.|+|.+.|..|.....+
T Consensus 303 G~Y~C~~~~~~~~~~~~~ 320 (772)
T 3v2a_R 303 GLYTCAASSGLMTKKNST 320 (772)
T ss_dssp SEEEEEEECSSCEEEEEE
T ss_pred eEEEEEEEcCCcceeEEE
Confidence 999999999988765444
No 214
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.79 E-value=6.2e-19 Score=113.44 Aligned_cols=154 Identities=10% Similarity=0.081 Sum_probs=91.9
Q ss_pred CCCc-eEEEEECCEecCCCCCceEEEecC---CCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCccc
Q psy16859 1 YVKP-EVIWLRGNTPLPKSSPRFKYIEDS---NNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKH 76 (168)
Q Consensus 1 ~p~p-~v~W~~~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~ 76 (168)
||.| .|.||+++..+............. ....+|.|.+++.+|+|.|.|.+.+..+.......+.+. .. .
T Consensus 47 ~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~-~~-----~ 120 (239)
T 1i1c_A 47 NDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPAPIEKSISKP-EG-----T 120 (239)
T ss_dssp TCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSSCEEEEECCC-SS-----C
T ss_pred CCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCCCcEEEEecC-CC-----C
Confidence 4877 999999986653211000001110 123479999999999999999999887654222222110 00 1
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEcc-CCC-CeEEEeeCCEeccCCCCcEE-EecCC-E---EEEEEccCCCCCCe
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPK-PKVTWMKGIKDITTSSRTMT-ETVND-Y---VRLTLKRATDDENG 149 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~-~~~~W~~~~~~~~~~~~~~~-~~~~~-~---~~l~i~~~~~~d~g 149 (168)
..+|.+...+.... ...|..+.|.|.+.| .|. ..+.|++++..+........ ..... . ..|.+....++|.|
T Consensus 121 ~~~P~v~v~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~g 199 (239)
T 1i1c_A 121 PRGPQVYTMAPPKE-EMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQQGN 199 (239)
T ss_dssp CBCCEEEEECCCGG-GGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTC
T ss_pred CcCCEEEEECCChH-HhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCEEEEEEEEEChhhcCCCC
Confidence 23455544442222 235788999999988 454 47999999987753221111 11111 1 23555555556799
Q ss_pred eEEEEEEcCCce
Q psy16859 150 TYFIVARNIYGS 161 (168)
Q Consensus 150 ~y~C~~~n~~g~ 161 (168)
.|+|.|.|....
T Consensus 200 ~YtC~v~n~~l~ 211 (239)
T 1i1c_A 200 TFTCSVLHEGLE 211 (239)
T ss_dssp CEEEEEECTTSG
T ss_pred EEEEEEECCCCC
Confidence 999999997643
No 215
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.79 E-value=4.9e-19 Score=115.81 Aligned_cols=137 Identities=15% Similarity=0.148 Sum_probs=88.2
Q ss_pred ceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc----eeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCC
Q psy16859 21 RFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG----YTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGE 96 (168)
Q Consensus 21 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 96 (168)
|+.+.....+..+|.|.+++.+|+|.|.|.+.+... .......|.|..... ...+|.+...+.....+..|.
T Consensus 90 r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~----~~~~P~v~~~~~~~~~~~~g~ 165 (270)
T 3qib_D 90 RFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLK----NVFPPEVAVFEPSEAEISHTQ 165 (270)
T ss_dssp HEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCST----TCBCCEEEEEECCHHHHHHHS
T ss_pred cEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccc----cccCCceEEECCCccccccCC
Confidence 666554335567999999999999999999986421 222345677754211 012343333222344455699
Q ss_pred eEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcE---EE-----ecCC---EEEEEEccCCCCC-CeeEEEEEEcCCce
Q psy16859 97 DISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTM---TE-----TVND---YVRLTLKRATDDE-NGTYFIVARNIYGS 161 (168)
Q Consensus 97 ~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~---~~-----~~~~---~~~l~i~~~~~~d-~g~y~C~~~n~~g~ 161 (168)
.++|.|.+.+ .|.+ .+.|++++..+....... .. .... ...|.|.....+| .|.|+|.+.|....
T Consensus 166 ~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~ 244 (270)
T 3qib_D 166 KATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 244 (270)
T ss_dssp EEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBC
T ss_pred ceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCC
Confidence 9999999988 6666 799999998876432110 00 0111 1457777777777 99999999987543
No 216
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.78 E-value=7.4e-18 Score=94.74 Aligned_cols=89 Identities=20% Similarity=0.356 Sum_probs=76.1
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.+|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.........+|.|.++..+|+|.|+|.|.|
T Consensus 7 ~~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 85 (103)
T 3qp3_A 7 HAPRITLRM-RSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTN 85 (103)
T ss_dssp EEEEEEECC-CCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCEEEeCC-cceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEe
Confidence 355666656 5778999999999999999999999999999998877777666666667899999999999999999999
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
..|.....+.
T Consensus 86 ~~G~~~~~~~ 95 (103)
T 3qp3_A 86 YKGEASDYAT 95 (103)
T ss_dssp TTEEEEEEEE
T ss_pred CCCcEEEEEE
Confidence 9998876554
No 217
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.78 E-value=9.9e-18 Score=95.95 Aligned_cols=89 Identities=26% Similarity=0.354 Sum_probs=75.5
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.||.+...+ ..+.+..|+.+.|.|.+.|.|.+.+.|++++..+....++..........|.|.++..+|+|.|+|.|.|
T Consensus 6 ~pp~i~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 6 SGPQIIQFP-EDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCCEESCCC-CSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCCEEEeCC-CCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEE
Confidence 466666555 5788999999999999999999999999999888777676666555567899999999999999999999
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
..|.....+.
T Consensus 85 ~~g~~~~~~~ 94 (114)
T 2cqv_A 85 KLGSRQAQVN 94 (114)
T ss_dssp SSCEEECCEE
T ss_pred CCCcEEEEEE
Confidence 9998775543
No 218
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.78 E-value=9.1e-18 Score=107.93 Aligned_cols=155 Identities=15% Similarity=0.164 Sum_probs=95.6
Q ss_pred CCceEEEEECC--Ee---c-----------CCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc----e-eeE
Q psy16859 2 VKPEVIWLRGN--TP---L-----------PKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG----Y-TET 60 (168)
Q Consensus 2 p~p~v~W~~~~--~~---~-----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~----~-~~~ 60 (168)
+.+.|.|||++ .. + .....|+.+.....+..+|.|.+++.+|+|.|.|.+.+..+ . ...
T Consensus 26 ~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~ 105 (238)
T 1bec_A 26 NHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQTSVYFCASGGGRGSYAEQFFGP 105 (238)
T ss_dssp CCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGCEEEEEEEESCTTCGGGCEECC
T ss_pred CCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccCEEEEEEEecCCCCccccccCC
Confidence 56889999853 11 1 01245676654325567999999999999999999998631 1 112
Q ss_pred EEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCc---EEEecCCE
Q psy16859 61 FARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRT---MTETVNDY 135 (168)
Q Consensus 61 ~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~---~~~~~~~~ 135 (168)
...|.|..... ...+|.+...+.....+..|..+.|.|.+.|. |.+ .+.|++++..+...... ........
T Consensus 106 ~~~l~V~~~~~----~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~g~ 181 (238)
T 1bec_A 106 GTRLTVLEDLR----QVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYS 181 (238)
T ss_dssp CEEEEEESCGG----GCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEECTTEEECSSCEEEETTE
T ss_pred CEEEEEeccCC----CCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEECCCceecccceEeCCCCC
Confidence 34677754210 01244444332233445689999999999985 655 89999999877543211 11111221
Q ss_pred ----EEEEEccCCCCC-CeeEEEEEEcCCc
Q psy16859 136 ----VRLTLKRATDDE-NGTYFIVARNIYG 160 (168)
Q Consensus 136 ----~~l~i~~~~~~d-~g~y~C~~~n~~g 160 (168)
..|.|......| .|.|+|.|.|...
T Consensus 182 ~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 182 YCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp EEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred EEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 234444444444 6789999999743
No 219
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.78 E-value=3.9e-18 Score=109.94 Aligned_cols=155 Identities=15% Similarity=0.209 Sum_probs=95.5
Q ss_pred CCceEEEEECC--Ee---c-----------C-C-CCCceEEEecC-CCEEEEEEcCCCCCCCeEEEEEEEcccc-----e
Q psy16859 2 VKPEVIWLRGN--TP---L-----------P-K-SSPRFKYIEDS-NNLHTLILSGVTAEEAGKYTCRVSNEYG-----Y 57 (168)
Q Consensus 2 p~p~v~W~~~~--~~---~-----------~-~-~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-----~ 57 (168)
+.+.|.|||+. .. + . . ...|+.+..+. .+..+|+|.+++.+|+|.|.|.+.+... .
T Consensus 31 ~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~ 110 (242)
T 1hxm_B 31 SATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEAQQELGKKI 110 (242)
T ss_dssp TTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEECSSTTCEE
T ss_pred cCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCcccCEEEEEeeecCCccccccc
Confidence 56789999843 11 1 0 0 34677766441 2577999999999999999999987631 1
Q ss_pred --eeEEEEEEEEeccCCCcccCCCCe-EEecCCcceEeecCCeEEEEEEEccC-CC-CeEEEeeCCE-eccCCC-CcEEE
Q psy16859 58 --TETFARVDVINVSSGAVKHEKPAM-FLTRPDTMMSVALGEDISFSFRLAGS-PK-PKVTWMKGIK-DITTSS-RTMTE 130 (168)
Q Consensus 58 --~~~~~~l~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~-~~~~~~-~~~~~ 130 (168)
......|.|...+... ..+|. ....+ ....+..|+.+.|.|.+.+. |. +.+.|++++. .+.... .....
T Consensus 111 ~~~~~~~~L~V~~~~~~~---~~~p~~~v~~p-~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~l~~~~~~~~~~ 186 (242)
T 1hxm_B 111 KVFGPGTKLIITDKQLDA---DVSPKPTIFLP-SIAETKLQKAGTYLCLLEKFFPDVIKIHWEEKKSNTILGSQEGNTMK 186 (242)
T ss_dssp EEECCCEEEEEESSCCCS---CCSCBCCCCCC-CGGGGGSSSCEEEEEEEEEESSCCEEEEEEESSSCCCCCCEECCCEE
T ss_pred eeEcCcEEEEEcccccCC---CcCCCceEECC-ChhhcccCCCceEEEEEeeEECCCeEEEEEcCCCEeecCccccceec
Confidence 1124577775422100 00121 12223 23345579999999999885 64 6899999886 443221 11111
Q ss_pred ecCC---EEEEEEccCCCCCCeeEEEEEEcCCcee
Q psy16859 131 TVND---YVRLTLKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 131 ~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
..+. ...|.|..... + |.|+|.+.|..+..
T Consensus 187 ~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~ 219 (242)
T 1hxm_B 187 TNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKN 219 (242)
T ss_dssp CSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGG
T ss_pred CCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCC
Confidence 1111 24688877665 4 99999999998765
No 220
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.78 E-value=1.2e-18 Score=113.24 Aligned_cols=136 Identities=18% Similarity=0.193 Sum_probs=74.5
Q ss_pred CCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccc----------e--e-eEEEEEEEEeccCCCcccCCCCeEEe
Q psy16859 19 SPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYG----------Y--T-ETFARVDVINVSSGAVKHEKPAMFLT 84 (168)
Q Consensus 19 ~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~----------~--~-~~~~~l~v~~~~~~~~~~~~~~~~~~ 84 (168)
..|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+ . . .....|.|...+ ..+|.+..
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~------~~~P~v~~ 138 (257)
T 3bn9_D 65 KGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSAS------TKGPSVFP 138 (257)
T ss_dssp TTTEEEEEETTTTEEEEEEESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSC------CBCCEECC
T ss_pred CCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCC------CcCCcEEE
Confidence 357776543 24567999999999999999999998654 1 1 123567774311 12344332
Q ss_pred -cCCcceEeecCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcEEEecC-C---EEEEEEccCCCCCCeeEEEEEEc
Q psy16859 85 -RPDTMMSVALGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTMTETVN-D---YVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 85 -~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~-~---~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.+. ..+..|..++|.|.+.+. |.+ .+.|++++..+............ . .+.|.|.....+| |.|+|.|.|
T Consensus 139 ~~p~--~~~~~g~~v~L~C~~~g~~P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n 215 (257)
T 3bn9_D 139 LAPS--SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNH 215 (257)
T ss_dssp CCC-------------CCCEEEEEBSSCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEE
T ss_pred ecCc--ccccCCCcEEEEEEEeeEECCCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEe
Confidence 332 235678999999999885 776 89999988653211000011111 1 2457777777777 999999999
Q ss_pred CCceee
Q psy16859 158 IYGSDR 163 (168)
Q Consensus 158 ~~g~~~ 163 (168)
......
T Consensus 216 ~~~~~~ 221 (257)
T 3bn9_D 216 KPSNTK 221 (257)
T ss_dssp GGGTEE
T ss_pred cCCCcC
Confidence 765443
No 221
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.77 E-value=8.6e-19 Score=121.71 Aligned_cols=154 Identities=17% Similarity=0.250 Sum_probs=98.2
Q ss_pred CCceEEEEECC--Eec----C------------CCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEE
Q psy16859 2 VKPEVIWLRGN--TPL----P------------KSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFA 62 (168)
Q Consensus 2 p~p~v~W~~~~--~~~----~------------~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 62 (168)
|.+.|.|||++ ..+ . ....|+.+..+ .++..+|.|.+++.+|+|.|.|.+.+..+......
T Consensus 29 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~ 108 (434)
T 1igy_B 29 TTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLTSDDSAVYYCVREGEVPYWGQGT 108 (434)
T ss_dssp GGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBCGGGCSEECCCCSSSSCCCCCCE
T ss_pred cCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCChHHCEEEEEEEEccccccCCce
Confidence 36789999963 211 0 01346655432 13345899999999999999999988544333455
Q ss_pred EEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcEEEecCC---EEE
Q psy16859 63 RVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTMTETVND---YVR 137 (168)
Q Consensus 63 ~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~~---~~~ 137 (168)
.|.|..... ..|..+...+. ..+..|+.+.|.|.+.|. |.+ .+.|++++..+...........+. ...
T Consensus 109 ~l~V~~~~~-----~~P~i~~~~~~--~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~ 181 (434)
T 1igy_B 109 TVTVSSAKT-----TPPSVYPLAPG--SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSS 181 (434)
T ss_dssp ECEECCSCC-----BCCCEEEECCC--CCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEE
T ss_pred EEEEccCCC-----CCCeEEEcCCc--cccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEE
Confidence 677742111 12333333332 235789999999999885 766 899999886432100000000111 246
Q ss_pred EEEccCCCCCCeeEEEEEEcCCceee
Q psy16859 138 LTLKRATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 138 l~i~~~~~~d~g~y~C~~~n~~g~~~ 163 (168)
|.|..+..+| |.|+|.|.|..|...
T Consensus 182 L~i~~~~~~d-g~Y~C~a~n~~~~~~ 206 (434)
T 1igy_B 182 VTVPSSPRPS-ETVTCNVAHPASSTK 206 (434)
T ss_dssp EEEETTTTTS-SCCEEEEECTTTTCC
T ss_pred EEEcchhcCC-CcEEEEEEeCCCCcc
Confidence 8899998888 999999999988743
No 222
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.77 E-value=1.3e-18 Score=109.71 Aligned_cols=151 Identities=12% Similarity=0.131 Sum_probs=84.5
Q ss_pred CceEEEEECCEecCCCCCceEEEecCCCE----EEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCC
Q psy16859 3 KPEVIWLRGNTPLPKSSPRFKYIEDSNNL----HTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEK 78 (168)
Q Consensus 3 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~ 78 (168)
.+.|.|+|++..+............ ++. ..|.|.....+|+|.|+|.+.|..+.......+.+... ...
T Consensus 36 ~~~v~W~k~~~~~~~~~~~~~~~~~-~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~~~~~v~~~~~------~~~ 108 (207)
T 1l6x_A 36 EVKFNWYVDGVEVHNAKTKPREEQY-NSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG------QPR 108 (207)
T ss_dssp CCEEEEEETTEEECCCEECCCEECT-TSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCS------CCB
T ss_pred CeEEEEEECCccccCcccCCceecc-CCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcceEEEeccCCC------CCc
Confidence 3599999999877422100111111 221 12444444445599999999998765433323321000 023
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccC-CC-CeEEEeeCCEeccCCCCcEE-EecCC-E---EEEEEccCCCCCCeeE
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGS-PK-PKVTWMKGIKDITTSSRTMT-ETVND-Y---VRLTLKRATDDENGTY 151 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~~~~~~~~~~-~~~~~-~---~~l~i~~~~~~d~g~y 151 (168)
+|.+...+..... ..|..+.|.|.+.|. |. +.+.|++++..+........ ..... . ..|.+......|.|.|
T Consensus 109 ~P~v~~~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~Y 187 (207)
T 1l6x_A 109 EPQVYTLPPSRDE-LTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVF 187 (207)
T ss_dssp CCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCE
T ss_pred CCEEEEECCChHH-hcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEEEECHHHcCCCCEE
Confidence 4444433322222 346679999999984 54 48999999987653211111 11111 1 2455655556779999
Q ss_pred EEEEEcCCce
Q psy16859 152 FIVARNIYGS 161 (168)
Q Consensus 152 ~C~~~n~~g~ 161 (168)
+|.|.|....
T Consensus 188 tC~a~n~~l~ 197 (207)
T 1l6x_A 188 SCSVMHEALH 197 (207)
T ss_dssp EEEEECTTSG
T ss_pred EEEEEcCCcC
Confidence 9999997643
No 223
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.77 E-value=8.5e-19 Score=115.59 Aligned_cols=136 Identities=15% Similarity=0.119 Sum_probs=93.6
Q ss_pred EEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEec
Q psy16859 6 VIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLTR 85 (168)
Q Consensus 6 v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~ 85 (168)
+.|++++.. +...... ....+|.|.+++.+|+|.|+|.+.|..+.....+.|.|..+ +..+...
T Consensus 32 v~W~~~~~~------~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~---------~~~~~~~ 95 (292)
T 4dkd_C 32 VEWDGPPSP------HWTLYSD-GSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDP---------ARPWNVL 95 (292)
T ss_dssp CCBCCCCCS------SCEECCB-TTEEEEEESSCCGGGCSCEEECCCC----CCEEECCEECCS---------SCCEEES
T ss_pred eEEccCCCC------ceEEecc-CceEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcCc---------ccccccc
Confidence 678754321 2222333 44568999999999999999999988777777777777432 2223334
Q ss_pred CCcceEeecCCeEEEEEEEccCCC--CeEEEeeC-CEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCcee
Q psy16859 86 PDTMMSVALGEDISFSFRLAGSPK--PKVTWMKG-IKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 86 ~~~~~~~~~g~~~~l~C~~~~~p~--~~~~W~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
+ ....+.+|+.+.|.|.+.+ |. +.+.|+++ +..+....+..... ...|.|.++..+|.|.|+|.+.|..|..
T Consensus 96 ~-~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 170 (292)
T 4dkd_C 96 A-QEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSP---WHGFTIHRAKFIQSQDYQCSALMGGRKV 170 (292)
T ss_dssp C-SEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCS---SSCCEETTCCGGGCSEEEEEECSTTSCE
T ss_pred C-CeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccC---CceEEECCCCHHHCeEEEEEEEeCCCce
Confidence 4 4677889999999999987 44 78999986 45444433332211 1249999999999999999999987744
No 224
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.77 E-value=8.9e-17 Score=100.75 Aligned_cols=138 Identities=13% Similarity=0.100 Sum_probs=94.3
Q ss_pred CCc--eEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 2 VKP--EVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 2 p~p--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
|.| .|.|++.+..+ .+.... .....|.|.+++.+|+|.|.|.+.+..+.....+.|+|..+ |
T Consensus 34 p~P~~~i~W~~~~~~l----~~~~~~---~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~~~---------P 97 (210)
T 1gsm_A 34 ADRGASVQWRGLDTSL----GAVQSD---TGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYAF---------P 97 (210)
T ss_dssp SSTTCEEEEESSTTTT----CCEEEE---SSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBC---------C
T ss_pred CCCCcceEEeeccccc----CcEEec---CCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEEec---------C
Confidence 566 99999855443 233222 33458999999999999999999998887777888999643 3
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccC-CC----CeEEEeeCCEeccCCCCcE--EEe--------cC-C---EEEEEE
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGS-PK----PKVTWMKGIKDITTSSRTM--TET--------VN-D---YVRLTL 140 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~----~~~~W~~~~~~~~~~~~~~--~~~--------~~-~---~~~l~i 140 (168)
......+. ....|+.+ |.|.+.+. |. +.+.|++++..+....... ... .. . .+++.+
T Consensus 98 ~~~~i~~~---~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~ 173 (210)
T 1gsm_A 98 NQLTVSPA---ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRL 173 (210)
T ss_dssp SEEEEESS---SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEEC
T ss_pred CCcEEccc---eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEEEEEee
Confidence 23333342 45577778 99999984 64 3799999999885432111 100 01 1 134555
Q ss_pred ccCCCCCCeeEEEEEEcCC
Q psy16859 141 KRATDDENGTYFIVARNIY 159 (168)
Q Consensus 141 ~~~~~~d~g~y~C~~~n~~ 159 (168)
.....++.+.|+|.|.+..
T Consensus 174 ~~~~~D~~~~~tC~a~~~L 192 (210)
T 1gsm_A 174 PPLGTPVPPALYCQATMRL 192 (210)
T ss_dssp CCCCSSCCSEEEEEEEEEE
T ss_pred cCCcccCCceEEEEEEeeC
Confidence 5666677789999999865
No 225
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.76 E-value=5.9e-17 Score=107.44 Aligned_cols=136 Identities=16% Similarity=0.362 Sum_probs=94.5
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcC-CCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSG-VTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
+|.|.+.|++++..+. ...++.+... ....+|.|.+ ++.+|.|.|+|.+.|..|.....+.|.|...+. +
T Consensus 131 ~p~p~i~W~~~~~~~~-~~~~~~~~~~-~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~-------~ 201 (305)
T 2nzi_A 131 KPDPVITWQKGQDLID-NNGHYQVIVT-RSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPD-------P 201 (305)
T ss_dssp ESCCEEEEEESSSBCC-SSSSCEEEEC-SSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCC-------C
T ss_pred CCCCEEEEEECCEECC-CCCcEEEEEc-CCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCC-------C
Confidence 4889999999998884 4556766655 5567899999 999999999999999999988888888875442 2
Q ss_pred CeEEecCCcceEeecCCeEEEEEE--------------EccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFR--------------LAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATD 145 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~--------------~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 145 (168)
|.... .....+..+.|.|. +...+.+...|...+... ...+.|.++..
T Consensus 202 p~~~~-----~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~~-------------~~~~~i~~l~~ 263 (305)
T 2nzi_A 202 PRGVK-----VSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQAR-------------ETRYTVINLFG 263 (305)
T ss_dssp CEEEE-----EESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEES-------------SSEEEECSCCS
T ss_pred CCCce-----eeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECcccc-------------CceEEecCCCC
Confidence 22110 11113334444444 443333344444322211 23688999999
Q ss_pred CCCeeEEEEEEcCCceee
Q psy16859 146 DENGTYFIVARNIYGSDR 163 (168)
Q Consensus 146 ~d~g~y~C~~~n~~g~~~ 163 (168)
.+.|.|+|.|.|..|...
T Consensus 264 ~~~y~~~~~A~N~~G~~~ 281 (305)
T 2nzi_A 264 KTSYQFRVIAENKFGLSK 281 (305)
T ss_dssp SCEEEEEEEEEETTEECC
T ss_pred CCeEEEEEEEEeCCcccC
Confidence 999999999999998754
No 226
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.76 E-value=2.7e-17 Score=91.69 Aligned_cols=88 Identities=19% Similarity=0.296 Sum_probs=75.2
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
+|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+....++..........|.|.++..+|+|.|+|.+.|.
T Consensus 6 ~P~i~~~~-~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 6 KPVIVTGL-QDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EEEEEECC-CCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCEEEecC-ccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 45555555 56789999999999999999999999999999988777777666666678999999999999999999999
Q ss_pred CceeeEEEE
Q psy16859 159 YGSDRAFVT 167 (168)
Q Consensus 159 ~g~~~~~~~ 167 (168)
.|.....+.
T Consensus 85 ~g~~~~~~~ 93 (99)
T 3puc_A 85 AGSVSSSCK 93 (99)
T ss_dssp TEEEEEEEE
T ss_pred CCcEeEEEE
Confidence 998876554
No 227
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.76 E-value=1.7e-18 Score=110.85 Aligned_cols=151 Identities=13% Similarity=0.154 Sum_probs=93.6
Q ss_pred CCC-c-eEEEEECCEec-CCCCCceEEEecCCC----EEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCC
Q psy16859 1 YVK-P-EVIWLRGNTPL-PKSSPRFKYIEDSNN----LHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGA 73 (168)
Q Consensus 1 ~p~-p-~v~W~~~~~~~-~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~ 73 (168)
+|. | .|.|+++|..+ .... ....... ++ ...|.|.+++.+|+|.|+|.+.+..+.. .+.+.|.....
T Consensus 41 ~P~~p~~v~W~~~g~~~~~~~~-~~~~~~~-~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~--~~~~~v~~~~~-- 114 (231)
T 2w59_A 41 PSDSSLSVTWTREKSGNLRPDP-MVLQEHF-NGTYSASSAVPVSTQDWLSGERFTCTVQHEELPL--PLSKSVYRNTG-- 114 (231)
T ss_dssp SCCTTCEEEEECSSSSCCCCCC-CEEEECT-TSCEEEEEEEECCHHHHHTTCCEEEEEECTTCSS--CEEEEECCCCS--
T ss_pred cCCCCeEEEEEcCCeecccccc-ccceECC-CCcEEEEEEEEecchhccCCCEEEEEEEcCCCCC--ceEEEEecCCC--
Confidence 464 5 99999999876 3221 1111111 22 2469999999999999999999876543 23334421100
Q ss_pred cccCCCCeEE-ecCCcceEeecCCeEEEEEEEccC-C-CCeEEEeeCCEeccCCCCcE---EE---------ec-CC---
Q psy16859 74 VKHEKPAMFL-TRPDTMMSVALGEDISFSFRLAGS-P-KPKVTWMKGIKDITTSSRTM---TE---------TV-ND--- 134 (168)
Q Consensus 74 ~~~~~~~~~~-~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~~~W~~~~~~~~~~~~~~---~~---------~~-~~--- 134 (168)
...+|.+. ..+. ...+ .+..+.|.|.+.|. | .+.+.|++++..+....... .. .. +.
T Consensus 115 --~~~~P~v~v~~~~-~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~ 190 (231)
T 2w59_A 115 --PTTPPLIYPFAPH-PEEL-SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFV 190 (231)
T ss_dssp --CCBCCEEEEECCC-GGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC---CCCCEEE
T ss_pred --CCcCCEEEEeCCC-HHHh-ccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCcccccccCCCCCeEEE
Confidence 01234433 3332 2222 35579999999984 4 36899999998876543111 11 11 11
Q ss_pred EEEEEEccCCCCCCeeEEEEEEcCCce
Q psy16859 135 YVRLTLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 135 ~~~l~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
.+.|.|....+.|.|.|+|.|.|....
T Consensus 191 ~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 191 YSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp EEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred EEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 246778888888899999999998654
No 228
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.76 E-value=2e-17 Score=105.89 Aligned_cols=139 Identities=14% Similarity=0.146 Sum_probs=85.8
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEccc--------ceeeEEEEEEEEeccCCCcccCCCCeEE-ecCCcc
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEY--------GYTETFARVDVINVSSGAVKHEKPAMFL-TRPDTM 89 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~--------~~~~~~~~l~v~~~~~~~~~~~~~~~~~-~~~~~~ 89 (168)
.|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+.. ........|.|.... ..+|.+. ..+.
T Consensus 70 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~v~~~~~~-- 141 (232)
T 3qhz_H 70 TRLTISKDTSKSQVVLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSAS------TKGPSVFPLAPS-- 141 (232)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSC------CBCCEEEEECC---
T ss_pred CceEEEeccCCCEEEEEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCC------CCCCEEEEeccc--
Confidence 57776654 3567889999999999999999998652 112223456664221 1234444 3342
Q ss_pred eEeecCCeEEEEEEEccC-C-CCeEEEeeCCEeccCCCCcEEEecCC----EEEEEEccCCCCCCeeEEEEEEcCCceee
Q psy16859 90 MSVALGEDISFSFRLAGS-P-KPKVTWMKGIKDITTSSRTMTETVND----YVRLTLKRATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 90 ~~~~~g~~~~l~C~~~~~-p-~~~~~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 163 (168)
..+..|..+.|.|.+.+. | ...+.|++++..+............. .+.|.|......| |.|+|.|.|..+...
T Consensus 142 ~~~~~g~~v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~ 220 (232)
T 3qhz_H 142 SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 220 (232)
T ss_dssp ------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEE
T ss_pred ccccCCCcEEEEEEEeeEeCCCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCcc
Confidence 345579999999999874 3 33588999875432111111111111 1468888888888 999999999987666
Q ss_pred EEEE
Q psy16859 164 AFVT 167 (168)
Q Consensus 164 ~~~~ 167 (168)
...+
T Consensus 221 ~~~~ 224 (232)
T 3qhz_H 221 VDKR 224 (232)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 229
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.76 E-value=3.7e-17 Score=91.19 Aligned_cols=88 Identities=23% Similarity=0.397 Sum_probs=72.8
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEE-ecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTE-TVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
+|.+...+ ....+..|+.+.|.|.+.|.|.+.+.|++++..+....+.... .......|.|.++..+|+|.|+|.|.|
T Consensus 5 ~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 5 APKIFERI-QSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCceEecC-cceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 55566555 5678999999999999999999999999999988776655433 244567899999999999999999999
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
..|.....+.
T Consensus 84 ~~g~~~~~~~ 93 (99)
T 1g1c_A 84 IAGETSSHAF 93 (99)
T ss_dssp TTEEEEEEEE
T ss_pred CCCcEEEEEE
Confidence 9998876554
No 230
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.75 E-value=1.9e-17 Score=91.35 Aligned_cols=87 Identities=20% Similarity=0.390 Sum_probs=69.7
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCC--EeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGI--KDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
+|.+...+ ..+.+..|+.+.|.|.+.|.|.|.+.|++++ ..+... ...........|.|.++..+|+|.|+|.|.
T Consensus 2 ~P~i~~~~-~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 78 (93)
T 1wit_A 2 KPKILTAS-RKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE--LLVDAKSSTTSIFFPSAKRADSGNYKLKVK 78 (93)
T ss_dssp CCEECCCC-CEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT--SEEEEETTEEEEECTTBCGGGCEEEEEEEE
T ss_pred CCeEEcCC-CceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc--EEEEecCCEEEEEECCCChhcCEEEEEEEE
Confidence 34554444 5778999999999999999999999999998 776543 223333455789999999999999999999
Q ss_pred cCCceeeEEEEC
Q psy16859 157 NIYGSDRAFVTV 168 (168)
Q Consensus 157 n~~g~~~~~~~v 168 (168)
|..|.....+.|
T Consensus 79 N~~G~~~~~~~l 90 (93)
T 1wit_A 79 NELGEDEAIFEV 90 (93)
T ss_dssp ETTEEEEEEEEE
T ss_pred cCCCeEEEEEEE
Confidence 999988876643
No 231
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.75 E-value=1.2e-16 Score=103.28 Aligned_cols=139 Identities=14% Similarity=0.131 Sum_probs=84.5
Q ss_pred CCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEccc----------------------ceeeEEEEEEEEeccCCCcc
Q psy16859 19 SPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEY----------------------GYTETFARVDVINVSSGAVK 75 (168)
Q Consensus 19 ~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~----------------------~~~~~~~~l~v~~~~~~~~~ 75 (168)
..|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+.. ........|.|....
T Consensus 64 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~----- 138 (248)
T 3u2s_H 64 WGRLSISRDNSKDTLYLQMNSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSAS----- 138 (248)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCC-----
T ss_pred CCcEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccC-----
Confidence 357776543 2457789999999999999999998642 111123566664211
Q ss_pred cCCCCeEE-ecCCcceEeecCCeEEEEEEEcc-CC-CCeEEEeeCCEeccCCCCcEEEecCC----EEEEEEccCCCCCC
Q psy16859 76 HEKPAMFL-TRPDTMMSVALGEDISFSFRLAG-SP-KPKVTWMKGIKDITTSSRTMTETVND----YVRLTLKRATDDEN 148 (168)
Q Consensus 76 ~~~~~~~~-~~~~~~~~~~~g~~~~l~C~~~~-~p-~~~~~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~ 148 (168)
..+|.+. ..+. ..+..|..+.|.|.+.+ .| ...+.|.+++..+............. .+.|.|......+
T Consensus 139 -~~~P~v~~~~~~--~~~~~g~~~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~- 214 (248)
T 3u2s_H 139 -TKGPSVFPLAPS--SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT- 214 (248)
T ss_dssp -CBCCEEEEECCC--------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-
T ss_pred -CCCCEEEEeCCC--ccccCCCcEEEEEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-
Confidence 1234443 3332 23457999999999987 45 45699999875432111111111111 2467888888888
Q ss_pred eeEEEEEEcCCceeeEEE
Q psy16859 149 GTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 149 g~y~C~~~n~~g~~~~~~ 166 (168)
|.|+|.+.|..+......
T Consensus 215 ~~ytC~v~h~~~~~~~~~ 232 (248)
T 3u2s_H 215 QTYICNVNHKPSNTKVDK 232 (248)
T ss_dssp BCCEEEEEEGGGTEEEEE
T ss_pred CeEEEEEEECCCCcceEE
Confidence 999999999876655433
No 232
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.74 E-value=1.1e-16 Score=103.05 Aligned_cols=138 Identities=18% Similarity=0.177 Sum_probs=86.2
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccc-----------e--eeEEEEEEEEeccCCCcccCCCCeEE-e
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYG-----------Y--TETFARVDVINVSSGAVKHEKPAMFL-T 84 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-----------~--~~~~~~l~v~~~~~~~~~~~~~~~~~-~ 84 (168)
.|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+..+ . ......|.|.... ..+|.+. .
T Consensus 73 ~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~------~~~P~v~~~ 146 (239)
T 3tv3_H 73 SRLTLALDTPKNLVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSAS------TKGPSVFPL 146 (239)
T ss_dssp GGEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCC------CBCCEEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCC------CcCCEEEEE
Confidence 56666543 25567899999999999999999986531 1 1123456664221 1234444 3
Q ss_pred cCCcceEeecCCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcEEEecCC----EEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 85 RPDTMMSVALGEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTMTETVND----YVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 85 ~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
.+. ..+..|..+.|.|.+.+ .|.+ .+.|++++..+............. .+.|.|......| |.|+|.|.|.
T Consensus 147 ~~~--~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~ 223 (239)
T 3tv3_H 147 APS--SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHK 223 (239)
T ss_dssp CCC--CCC--TTEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEG
T ss_pred CCC--hhhccCCcEEEEEEEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEEC
Confidence 332 33457999999999987 4534 589999876432111111111111 2468888888888 9999999998
Q ss_pred CceeeEEE
Q psy16859 159 YGSDRAFV 166 (168)
Q Consensus 159 ~g~~~~~~ 166 (168)
.+......
T Consensus 224 ~~~~~~~~ 231 (239)
T 3tv3_H 224 PSNTKVDK 231 (239)
T ss_dssp GGTEEEEE
T ss_pred CCCceEEE
Confidence 87655443
No 233
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.74 E-value=1.4e-16 Score=88.55 Aligned_cols=80 Identities=20% Similarity=0.341 Sum_probs=70.0
Q ss_pred cceEeecCCeEEEEEEEccC-CCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCceeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGS-PKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 166 (168)
..+.+.+|+.+.|.|.+.+. |.+.+.|++++..+....++..........|.|.++..+|+|.|+|.+.|..|.....+
T Consensus 9 ~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 88 (97)
T 2bk8_A 9 MHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYA 88 (97)
T ss_dssp CCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred cCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEE
Confidence 56789999999999999997 89999999999988877777665556667899999999999999999999999887655
Q ss_pred E
Q psy16859 167 T 167 (168)
Q Consensus 167 ~ 167 (168)
.
T Consensus 89 ~ 89 (97)
T 2bk8_A 89 E 89 (97)
T ss_dssp E
T ss_pred E
Confidence 4
No 234
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.74 E-value=6.4e-17 Score=89.15 Aligned_cols=87 Identities=16% Similarity=0.080 Sum_probs=71.2
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.++.+...+ ..+.+.+|+.+.|.|.+.+ +.+.+.|++++..+....++.+...+...+|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~~~~~~~~-~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 4 ALIEVEKPL-YGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCEEECC-CCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCcEeeccC-cceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 455666555 5788999999999999976 55789999999999887777776666667899999999999999999999
Q ss_pred CCceeeEEE
Q psy16859 158 IYGSDRAFV 166 (168)
Q Consensus 158 ~~g~~~~~~ 166 (168)
..+++...+
T Consensus 82 ~~~sa~L~V 90 (93)
T 1waa_A 82 TKSAANLKV 90 (93)
T ss_dssp EEEEEEEEE
T ss_pred CcEEEEEEE
Confidence 765554443
No 235
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.74 E-value=6.6e-17 Score=90.24 Aligned_cols=88 Identities=27% Similarity=0.495 Sum_probs=71.9
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccC--CCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITT--SSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
||.+...+ ..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.........+|.|.++..+|+|.|+|.+.
T Consensus 5 pP~i~~~~-~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 5 PPKIEALP-SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEECCCC-SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCeeecCC-CcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 44454445 567889999999999999999999999999988763 345555555556789999999999999999999
Q ss_pred cCCceeeEEEE
Q psy16859 157 NIYGSDRAFVT 167 (168)
Q Consensus 157 n~~g~~~~~~~ 167 (168)
|..|.....+.
T Consensus 84 n~~g~~~~~~~ 94 (100)
T 3irg_A 84 NEFGSDSATVN 94 (100)
T ss_dssp ETTEEEEEEEE
T ss_pred eCCCcEEEEEE
Confidence 99998876654
No 236
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.74 E-value=6.2e-17 Score=91.53 Aligned_cols=89 Identities=28% Similarity=0.397 Sum_probs=74.4
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.+|.+...+ ..+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++..........|.|.++..+|+|.|+|.+.|
T Consensus 12 ~~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 12 SPPCFLRFP-RPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EEEEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeeEcCC-ccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEc
Confidence 356666666 5788999999999999999999999999999988776666555555566899999999999999999999
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
..|.....+.
T Consensus 91 ~~g~~~~~~~ 100 (107)
T 3irg_B 91 AAGEAYAAAA 100 (107)
T ss_dssp TTEEEEEEEE
T ss_pred CCCcEEEEEE
Confidence 9998876554
No 237
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.74 E-value=1.6e-17 Score=93.90 Aligned_cols=90 Identities=30% Similarity=0.449 Sum_probs=76.0
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
..++.+...| ..+.+..|+.+.|.|.+.|.|.+.+.|++++..+....++.........+|.|.++...|+|.|+|.+.
T Consensus 12 ~~~~~i~~~p-~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 90 (106)
T 1nct_A 12 TLAARILTKP-RSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVE 90 (106)
T ss_dssp SCCCEEEECC-CCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCB
T ss_pred CCCCEEEECC-CCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEE
Confidence 3456666666 578899999999999999999999999999988877777666655566799999999999999999999
Q ss_pred cCCceeeEEEE
Q psy16859 157 NIYGSDRAFVT 167 (168)
Q Consensus 157 n~~g~~~~~~~ 167 (168)
|..|.....+.
T Consensus 91 N~~G~~~~~~~ 101 (106)
T 1nct_A 91 NSEGKQEAEFT 101 (106)
T ss_dssp CSSCBCCEEEE
T ss_pred eCCCeEEEEEE
Confidence 99998776554
No 238
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=4.8e-17 Score=90.88 Aligned_cols=87 Identities=21% Similarity=0.229 Sum_probs=72.5
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.|+.+...+ ..+.+.+|+.+.|.|.+ .|.+.+.|++++..+....++.....+....|.|.++..+|+|.|+|.|.|
T Consensus 6 ~p~~~~~~~-~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (100)
T 2yuz_A 6 SGLKILTPL-TDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDA 82 (100)
T ss_dssp CCCCCSBCC-CCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESS
T ss_pred CCCEEeccC-CceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcC
Confidence 455555555 67889999999999999 788999999999999888887777666677899999999999999999999
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
...+..+.+.
T Consensus 83 ~~~~~~a~L~ 92 (100)
T 2yuz_A 83 YNVTLPAKVH 92 (100)
T ss_dssp SCCCEEEEEE
T ss_pred CCeeEEEEEE
Confidence 8555555554
No 239
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.73 E-value=7.4e-17 Score=89.95 Aligned_cols=88 Identities=28% Similarity=0.474 Sum_probs=70.9
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCc-EEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRT-MTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
||.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+...... .........+|.|.++..+|+|.|+|.|.|
T Consensus 5 ~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 5 PPTFKVSL-MDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEECC-CCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEEcC-CceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 55566555 4678899999999999999999999999999888765432 233334446899999999999999999999
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
..|.....+.
T Consensus 84 ~~g~~~~~~~ 93 (99)
T 1u2h_A 84 EYGARQCEAR 93 (99)
T ss_dssp TTEEEEEEEE
T ss_pred CCCceeEEEE
Confidence 9998876654
No 240
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.73 E-value=1.5e-17 Score=107.83 Aligned_cols=156 Identities=12% Similarity=0.145 Sum_probs=95.5
Q ss_pred CCceEEEEECC--E--e-cC-----------CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccc---ceeeEEE
Q psy16859 2 VKPEVIWLRGN--T--P-LP-----------KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEY---GYTETFA 62 (168)
Q Consensus 2 p~p~v~W~~~~--~--~-~~-----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~---~~~~~~~ 62 (168)
+.+.+.||++. . . +. ....|+.+.....+..+|.|.+++.+|+|.|.|.+.+.. .......
T Consensus 30 ~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~ 109 (252)
T 1oga_E 30 NHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAFYLCASSSRSSYEQYFGPGT 109 (252)
T ss_dssp CCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCCCEEEEEEEESSTTSCCEECCCE
T ss_pred CCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhhCEEEEEEEecCCccceeECCCE
Confidence 46789999853 1 1 10 123566655422345689999999999999999998852 1112234
Q ss_pred EEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcE---EE-----ec
Q psy16859 63 RVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTM---TE-----TV 132 (168)
Q Consensus 63 ~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~---~~-----~~ 132 (168)
.|.|..... ...+|.+...+.....+..|..+.|.|.+.+. |.+ .+.|++++..+....... .. ..
T Consensus 110 ~l~V~~~~~----~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~ 185 (252)
T 1oga_E 110 RLTVTEDLK----NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALND 185 (252)
T ss_dssp EEEEESCGG----GCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECSSEEECSSCEESCTTSTT
T ss_pred EEEEecccC----CCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECCCCcccccccccccccCCC
Confidence 567653210 01244444332233345578999999999984 654 899999998775432110 00 01
Q ss_pred CC---EEEEEEccCCCC-CCeeEEEEEEcCCce
Q psy16859 133 ND---YVRLTLKRATDD-ENGTYFIVARNIYGS 161 (168)
Q Consensus 133 ~~---~~~l~i~~~~~~-d~g~y~C~~~n~~g~ 161 (168)
.. .+.|.|....+. +.|.|+|.+.|....
T Consensus 186 gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 186 SRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 218 (252)
T ss_dssp CCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 11 134777766654 578899999997654
No 241
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.73 E-value=3.6e-16 Score=109.74 Aligned_cols=135 Identities=17% Similarity=0.167 Sum_probs=87.0
Q ss_pred CCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccce------eeEEEEEEEEeccCCCcccCCCCeEEecCCcceE
Q psy16859 19 SPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGY------TETFARVDVINVSSGAVKHEKPAMFLTRPDTMMS 91 (168)
Q Consensus 19 ~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~------~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (168)
..|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+. ....+.|.|.... ..+|.+...+.. .
T Consensus 66 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~~~--~ 137 (475)
T 1iga_A 66 RGRVTFTRDTSATTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSAS------PTSPKVFPLSLC--S 137 (475)
T ss_pred CCceEEEEcCCCCeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCC------CcCCeEEecCcc--c
Confidence 356666543 245678999999999999999999987641 1234567774311 123333332211 2
Q ss_pred eecCCeEEEEEEEccC-CC-C-eEEEeeCCEeccCCCCcEEE--ecCC---EEEEEEccCCCCCCeeEEEEEEcCCce
Q psy16859 92 VALGEDISFSFRLAGS-PK-P-KVTWMKGIKDITTSSRTMTE--TVND---YVRLTLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 92 ~~~g~~~~l~C~~~~~-p~-~-~~~W~~~~~~~~~~~~~~~~--~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
+..|+.+.|.|.+.|. |. + .+.|++++............ ..+. ...|.|......|.|.|+|.|.|..+.
T Consensus 138 ~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 215 (475)
T 1iga_A 138 TQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNP 215 (475)
T ss_pred cCCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCC
Confidence 3689999999999986 55 4 89999877432111000000 1111 135888888889999999999998764
No 242
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=1.4e-16 Score=91.73 Aligned_cols=79 Identities=22% Similarity=0.378 Sum_probs=67.9
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
..+.+..|+.+.|.|.+.|.|.|.+.|++++..+. ..+...........|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 32 ~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~ 110 (118)
T 2e7c_A 32 QTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIR 110 (118)
T ss_dssp SCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEE
T ss_pred CCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEE
Confidence 56788899999999999999999999999999886 34555555556678999999999999999999999998876654
No 243
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.73 E-value=3.1e-17 Score=104.97 Aligned_cols=140 Identities=14% Similarity=0.136 Sum_probs=84.3
Q ss_pred CCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcc--cc--eeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEee
Q psy16859 19 SPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNE--YG--YTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVA 93 (168)
Q Consensus 19 ~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~--~~--~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (168)
..|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+. .. .......|.|............|......+ ....+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p-~~~~v~ 143 (230)
T 1ypz_F 65 YKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLP-SVAETN 143 (230)
T ss_dssp SSEEEEEECCTTTEEEEEECSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECC-CHHHHH
T ss_pred CCeEEEEEcCCCCEEEEEECcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECC-Cchhhc
Confidence 457776643 236789999999999999999999874 11 111235677752110000000111122223 233455
Q ss_pred cCCeEEEEEEEccC-CC-CeEEEee-CCEeccCCCC-cEEEecCC---EEEEEEccCCCCCCeeEEEEEEcCCce
Q psy16859 94 LGEDISFSFRLAGS-PK-PKVTWMK-GIKDITTSSR-TMTETVND---YVRLTLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 94 ~g~~~~l~C~~~~~-p~-~~~~W~~-~~~~~~~~~~-~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
.|..++|.|.+.+. |. +.+.|++ ++..+..... ........ .+.|.|..... + |.|+|.+.|..+.
T Consensus 144 ~g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 144 LHKTGTYLCLLEAFFPDVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp HHSCEEEEEEEEEESSCCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred cCCcceEEEEEeeecCCCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 78899999999875 65 5899999 7765543211 11111111 24688887765 4 9999999998764
No 244
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.73 E-value=5.3e-17 Score=90.72 Aligned_cols=88 Identities=23% Similarity=0.403 Sum_probs=70.6
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEE-EecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMT-ETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
+|.+...+ ..+.+..|+.+.|.|.+.|.|.+.+.|++++..+........ ........|.|.++..+|+|.|+|.+.|
T Consensus 5 ~P~~~~~p-~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 5 PPRFIQVP-ENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEECCCCC-CCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCeEEeCC-CCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 44444445 567889999999999999999999999999988876554332 3334446899999999999999999999
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
..|.....+.
T Consensus 84 ~~g~~~~~~~ 93 (100)
T 2kdg_A 84 RAGEATFTVQ 93 (100)
T ss_dssp TTEEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9998876654
No 245
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.72 E-value=1.3e-16 Score=112.07 Aligned_cols=123 Identities=13% Similarity=0.106 Sum_probs=84.2
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-C-C
Q psy16859 32 HTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-P-K 109 (168)
Q Consensus 32 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~ 109 (168)
..|.|.+++.+|+|.|+|.+.|..+.......+.+... ..+|.+...+.....+..|+.+.|.|.+.|. | .
T Consensus 309 ~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~-------~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~ 381 (475)
T 1iga_A 309 SVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGN-------TFRPEVHLLPPPSEELALNELVTLTCLARGFSPKD 381 (475)
T ss_pred EEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCC-------CCCCeEEEECCChHHhccCCceEEEEEEeeeECCC
Confidence 47999999999999999999998876544444432111 2345554444333346789999999999985 3 3
Q ss_pred CeEEEeeCCEeccCCCCcE---EEe----cC---CEEEEEEccCCCCCCeeEEEEEEcCCce
Q psy16859 110 PKVTWMKGIKDITTSSRTM---TET----VN---DYVRLTLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 110 ~~~~W~~~~~~~~~~~~~~---~~~----~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
+.+.|++++..+....... ... .+ ..+.|.|.....+|.|.|+|.|.|....
T Consensus 382 ~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 382 VLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred CEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 5899999998876542100 111 11 1245778888888899999999997643
No 246
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.72 E-value=2.4e-16 Score=100.82 Aligned_cols=136 Identities=15% Similarity=0.141 Sum_probs=85.9
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEccc-----c-e--eeEEEEEEEEeccCCCcccCCCCeEE-ecCCcc
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEY-----G-Y--TETFARVDVINVSSGAVKHEKPAMFL-TRPDTM 89 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-----~-~--~~~~~~l~v~~~~~~~~~~~~~~~~~-~~~~~~ 89 (168)
.|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+.. + . ......|.|.... ..+|.+. ..+.
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~v~~~~~~-- 137 (230)
T 3n9g_H 66 GRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSAS------TKGPSVFPLAPS-- 137 (230)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSC------CBCCEEEEECCC--
T ss_pred CcEEEEecCCCCEEEEEECCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecC------CCCCEEEecCCC--
Confidence 57776544 2467889999999999999999998753 1 1 1123466664322 1234443 3342
Q ss_pred eEeecCCeEEEEEEEcc-CC-CCeEEEeeCCEeccCCCC-c-EEEecCC----EEEEEEccCCCCCCeeEEEEEEcCCce
Q psy16859 90 MSVALGEDISFSFRLAG-SP-KPKVTWMKGIKDITTSSR-T-MTETVND----YVRLTLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 90 ~~~~~g~~~~l~C~~~~-~p-~~~~~W~~~~~~~~~~~~-~-~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
..+..|..+.|.|.+.+ .| .+.+.| ++..+..... . ....... .+.|.|.....+| |.|+|.+.|..+.
T Consensus 138 ~~~~~g~~v~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~ 214 (230)
T 3n9g_H 138 SKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 214 (230)
T ss_dssp CCCCTTCEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGT
T ss_pred ccccCCCCEEEEEEEEeEECCCEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCC
Confidence 23468999999999987 44 346999 4433321100 0 0011111 2478899999999 9999999998876
Q ss_pred eeEEE
Q psy16859 162 DRAFV 166 (168)
Q Consensus 162 ~~~~~ 166 (168)
.....
T Consensus 215 ~~~~~ 219 (230)
T 3n9g_H 215 TKVDK 219 (230)
T ss_dssp EEEEE
T ss_pred cceEE
Confidence 55443
No 247
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.72 E-value=1.5e-17 Score=112.34 Aligned_cols=152 Identities=16% Similarity=0.187 Sum_probs=89.1
Q ss_pred CC-ceEEEEECCEecCC--------CCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEe----
Q psy16859 2 VK-PEVIWLRGNTPLPK--------SSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVIN---- 68 (168)
Q Consensus 2 p~-p~v~W~~~~~~~~~--------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~---- 68 (168)
|. |+|.|++++..+.. .+.++.. ...|.|.++..+| |.|+|.+.|..+.......+.+..
T Consensus 149 P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~------~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~ 221 (344)
T 1za6_B 149 PEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL------SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKT 221 (344)
T ss_dssp SSCCCEEETTTTBCTTEEECCCEECTTSCEEE------EEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC---
T ss_pred CCCeEEEEecCCccCceeECCCeECCCCCEEE------EEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccc
Confidence 65 79999999976421 1112211 2369999998888 999999999877543332222100
Q ss_pred --------ccCC--CcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-C-CCeEEEeeCCEeccCCCCcEEE-ecCC-
Q psy16859 69 --------VSSG--AVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-P-KPKVTWMKGIKDITTSSRTMTE-TVND- 134 (168)
Q Consensus 69 --------~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~~~W~~~~~~~~~~~~~~~~-~~~~- 134 (168)
.... ......+|.+...+..... ..|..+.|.|.+.|. | .+.+.|++++..+......... ....
T Consensus 222 ~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~ 300 (344)
T 1za6_B 222 HTCPPCGGGSSGGGSGGQPREPQVYTLPPSRDE-LTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGS 300 (344)
T ss_dssp -----------------CCBCCEEEEECCCGGG-GGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSC
T ss_pred cccCCCCCCccccccCCCCcCCEEEEeCCChHh-ccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCc
Confidence 0000 0001234444433322222 346679999999984 4 3689999998876542211111 1111
Q ss_pred ---EEEEEEccCCCCCCeeEEEEEEcCCce
Q psy16859 135 ---YVRLTLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 135 ---~~~l~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
...|.+.....+|.|.|+|.|.|....
T Consensus 301 ~~~~s~l~i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 301 FFLYSKLTVDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp EEEEEEEEECHHHHHTTCEEEEEEECTTST
T ss_pred EEEEEEEEEChHHccCCCeEEEEEEcCCCC
Confidence 134667666677899999999997654
No 248
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.72 E-value=1.1e-16 Score=103.68 Aligned_cols=133 Identities=11% Similarity=0.127 Sum_probs=83.2
Q ss_pred ceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccc------eeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeec
Q psy16859 21 RFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYG------YTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVAL 94 (168)
Q Consensus 21 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~------~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (168)
|+.+... .... |.|.+++.+|+|.|.|.+.+..+ .......|.|..... ...+|.+...+.....+..
T Consensus 65 R~~~~~~-~~~~-L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~----~~~~P~v~~~~~~~~~~~~ 138 (253)
T 3to4_D 65 DYLATRV-TDTE-LRLQVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLK----NVFPPEVAVFEPSEAEISH 138 (253)
T ss_dssp EEEEECC-SSSC-CEEEEESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCST----TCBCCEEEEEECCHHHHHH
T ss_pred cEEEEeC-CCCe-EEEccCChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCC----CCCCCeEEEeCCChhhccc
Confidence 5555544 2222 99999999999999999986543 112234666653210 0124444332222333445
Q ss_pred CCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcE---EE-----ecCCE---EEEEEccCCCCC-CeeEEEEEEcCC
Q psy16859 95 GEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTM---TE-----TVNDY---VRLTLKRATDDE-NGTYFIVARNIY 159 (168)
Q Consensus 95 g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~---~~-----~~~~~---~~l~i~~~~~~d-~g~y~C~~~n~~ 159 (168)
|..++|.|.+.+ .|.+ .+.|++++..+....... .. ..... +.|.+.....+| .|.|+|.|.|..
T Consensus 139 g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 139 TQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp HSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred CCceEEEEEEceEECCcEEEEEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 789999999998 6666 799999998875422110 00 01111 467788777777 779999999874
No 249
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.72 E-value=6.4e-17 Score=91.44 Aligned_cols=66 Identities=32% Similarity=0.561 Sum_probs=57.7
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEe
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVIN 68 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 68 (168)
+|.|+|.|+||+..|. ...++.+..+ +...+|.|.+++.+|+|.|+|.+.|..|.....+.|.|..
T Consensus 40 ~P~p~v~W~k~g~~l~-~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 40 EPPPVVVWEKGGQQLA-ASERLSFPAD-GAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp ESCCEEEEEETTEECC-CCSSEECCEE-TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ecCCEEEEEECccccc-ceeeEEEeec-CceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEEEEEc
Confidence 4899999999999994 5567777666 6678999999999999999999999999988888898854
No 250
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.71 E-value=1.8e-16 Score=108.26 Aligned_cols=149 Identities=11% Similarity=0.117 Sum_probs=91.5
Q ss_pred eEEEEECCEecCCCCCce-EEEec--CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCe
Q psy16859 5 EVIWLRGNTPLPKSSPRF-KYIED--SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAM 81 (168)
Q Consensus 5 ~v~W~~~~~~~~~~~~~~-~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~ 81 (168)
.|.|++++..+....... ..... ......|.|.+++.+|+|.|+|.+.+..+.......+.+... ...+|.
T Consensus 203 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~------~~~~P~ 276 (376)
T 2aty_A 203 QFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKG------RPKAPQ 276 (376)
T ss_pred EEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCCceEEEEcCCCC------CCcCCe
Confidence 799999986652111000 00011 012347999999999999999999987654333222322100 123555
Q ss_pred EEecCCcceEeecCCeEEEEEEEccC-C-CCeEEEeeCCEeccCCCCcEEEecC--C---EEEEEEccCCCCCCeeEEEE
Q psy16859 82 FLTRPDTMMSVALGEDISFSFRLAGS-P-KPKVTWMKGIKDITTSSRTMTETVN--D---YVRLTLKRATDDENGTYFIV 154 (168)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~~~~~W~~~~~~~~~~~~~~~~~~~--~---~~~l~i~~~~~~d~g~y~C~ 154 (168)
+...+. ......|+.++|.|.+.|. | .+.+.|++++..+............ . ...|.+....++|.|.|+|.
T Consensus 277 v~v~~~-~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~ 355 (376)
T 2aty_A 277 LYTIPP-PKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFTCS 355 (376)
T ss_pred EEeeCC-CHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEEEE
Confidence 555443 2234458899999999984 3 4589999999876432221111111 1 24577777777889999999
Q ss_pred EEcCCc
Q psy16859 155 ARNIYG 160 (168)
Q Consensus 155 ~~n~~g 160 (168)
|.|..-
T Consensus 356 v~h~~l 361 (376)
T 2aty_A 356 VLHEGL 361 (376)
T ss_pred EEeCCC
Confidence 999754
No 251
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.71 E-value=5.8e-17 Score=87.51 Aligned_cols=78 Identities=22% Similarity=0.281 Sum_probs=66.5
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCceeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 166 (168)
..+.+.+|+.+.|.|.+.+ |.|.+.|++++..+....++..........|.|.++..+|+|.|+|.|.|..+.....+
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~a~l~V 81 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQDSRIFLVSV 81 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTTCEEEEEEE
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCEEEEEEEEE
Confidence 4577889999999999966 88899999999999988888777777677899999999999999999988765555443
No 252
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.71 E-value=8.2e-17 Score=94.97 Aligned_cols=81 Identities=30% Similarity=0.540 Sum_probs=67.3
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC----------------------------Eec-cCCCCcEEEecCCEEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI----------------------------KDI-TTSSRTMTETVNDYVRL 138 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~----------------------------~~~-~~~~~~~~~~~~~~~~l 138 (168)
..+.+..|+.+.|.|.+.|.|.|.+.|++++ ..+ ....+...........|
T Consensus 26 ~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~L 105 (139)
T 1gxe_A 26 DTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIF 105 (139)
T ss_dssp CEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEEE
T ss_pred CCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEEE
Confidence 5788999999999999999999999999987 333 23345555555556789
Q ss_pred EEccCCCCCCeeEEEEEEcCCceeeEEEEC
Q psy16859 139 TLKRATDDENGTYFIVARNIYGSDRAFVTV 168 (168)
Q Consensus 139 ~i~~~~~~d~g~y~C~~~n~~g~~~~~~~v 168 (168)
.|.++..+|+|.|+|.|.|..|.....++|
T Consensus 106 ~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L 135 (139)
T 1gxe_A 106 TVEGAEKEDEGVYTVTVKNPVGEDQVNLTV 135 (139)
T ss_dssp ECSCCCTTTCEEEEEEEECSSCEEEEEEEE
T ss_pred EECCCCcccCEEEEEEEEeCCceEEEEEEE
Confidence 999999999999999999999999877654
No 253
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.70 E-value=6.8e-17 Score=88.57 Aligned_cols=70 Identities=17% Similarity=0.252 Sum_probs=60.7
Q ss_pred eEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 90 MSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 90 ~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
+.+.+|+.+.|.|.+.+ |.+.+.|++++..+....++.....+...+|.|.++..+|+|.|+|.|.|..+
T Consensus 16 v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 85 (91)
T 2lvc_A 16 VHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDECA 85 (91)
T ss_dssp EECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSCEE
T ss_pred EEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcceEE
Confidence 34568999999999865 88899999999999888888877777778999999999999999999988533
No 254
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.70 E-value=9.1e-17 Score=112.24 Aligned_cols=149 Identities=11% Similarity=0.123 Sum_probs=83.5
Q ss_pred eEEEEECCEecCCCCCceEEEecCCCEE----EEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCC
Q psy16859 5 EVIWLRGNTPLPKSSPRFKYIEDSNNLH----TLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPA 80 (168)
Q Consensus 5 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~----~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~ 80 (168)
.|.|++++..+............ ++.. .|.|.....+|+|.|+|.+.|..+.......+.+... ...+|
T Consensus 284 ~i~W~k~~~~~~~~~~~~~~~~~-~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~------~~~~P 356 (457)
T 1hzh_H 284 KFNWYVDGVEVHNAKTKPREEQY-NSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG------QPREP 356 (457)
T ss_dssp EEEEEETTEEECCCEEEEEEECT-TSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCC------CCBCC
T ss_pred EEEEEeCCccccccccccceecC-CCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccC------CCCCC
Confidence 99999999887322111111122 2311 2222222233499999999976544433333322000 02344
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCCCC--eEEEeeCCEeccCCCCcEEE-ecCC-E---EEEEEccCCCCCCeeEEE
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSPKP--KVTWMKGIKDITTSSRTMTE-TVND-Y---VRLTLKRATDDENGTYFI 153 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~~~~~~~~~~~-~~~~-~---~~l~i~~~~~~d~g~y~C 153 (168)
.+...+.....+..|. +.|.|.+.|.+++ .+.|++++..+......... .... . ..|.+.....+|.|.|+|
T Consensus 357 ~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC 435 (457)
T 1hzh_H 357 QVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSC 435 (457)
T ss_dssp EEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEE
T ss_pred eEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEE
Confidence 4444442333344455 9999999986443 89999999887543211111 1111 1 345666666678999999
Q ss_pred EEEcCCce
Q psy16859 154 VARNIYGS 161 (168)
Q Consensus 154 ~~~n~~g~ 161 (168)
.|.|....
T Consensus 436 ~a~n~~l~ 443 (457)
T 1hzh_H 436 SVMHEALH 443 (457)
T ss_dssp EEECTTSG
T ss_pred EEEECCCC
Confidence 99997644
No 255
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=2.9e-16 Score=89.24 Aligned_cols=88 Identities=27% Similarity=0.412 Sum_probs=70.2
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccC-CCCcEEEec-CCEEEEEEccCCCCCCeeEEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITT-SSRTMTETV-NDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~-~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
.+|.+...+ ..+.+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..++..... .....|.|.++..+|.|.|+|.+
T Consensus 7 ~~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 7 GAPFFEMKL-KHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp CCCCBSSCC-CCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCCEEEecC-cCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 455555555 577899999999999999999999999999988765 344444433 33458999999999999999999
Q ss_pred EcCCceeeEEE
Q psy16859 156 RNIYGSDRAFV 166 (168)
Q Consensus 156 ~n~~g~~~~~~ 166 (168)
.|..|.....+
T Consensus 86 ~N~~g~~~~~~ 96 (110)
T 2dm2_A 86 ANPQGRISCTG 96 (110)
T ss_dssp ECTTCCEEECC
T ss_pred EECCCeEEEEE
Confidence 99999876543
No 256
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.69 E-value=4.4e-16 Score=89.70 Aligned_cols=74 Identities=24% Similarity=0.383 Sum_probs=62.3
Q ss_pred cCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecC-------CEEEEEEccCCCCCCeeEEEEEEcCCceeeEEE
Q psy16859 94 LGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVN-------DYVRLTLKRATDDENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 94 ~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~-------~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 166 (168)
.+..+.|.|.+.|.|.|.+.|+++|..+....+....... ..+.|.|.++...|+|.|+|.|.|.+|...+.+
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 6678999999999999999999999999877664432211 246899999999999999999999999998776
Q ss_pred E
Q psy16859 167 T 167 (168)
Q Consensus 167 ~ 167 (168)
.
T Consensus 94 ~ 94 (126)
T 1he7_A 94 M 94 (126)
T ss_dssp E
T ss_pred E
Confidence 4
No 257
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.69 E-value=4e-16 Score=88.09 Aligned_cols=88 Identities=17% Similarity=0.232 Sum_probs=72.4
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
..++.+...+ ..+.+..|+.+.|.|.+.+.|.+ +.|++++..+....++..........|.|.++..+|+|.|+|.+.
T Consensus 6 ~~~p~~~~~~-~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (106)
T 2dlt_A 6 SGQLEVLQDI-ADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPD 83 (106)
T ss_dssp CCCCCEEECC-CCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEE
T ss_pred CCCCEEecCC-CCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEc
Confidence 3466666666 57889999999999999988877 999999998887777777666666789999999999999999999
Q ss_pred cCCceeeEEE
Q psy16859 157 NIYGSDRAFV 166 (168)
Q Consensus 157 n~~g~~~~~~ 166 (168)
|..+...+.+
T Consensus 84 n~~~~~~~~l 93 (106)
T 2dlt_A 84 GYALSLSAKL 93 (106)
T ss_dssp TSCCCCCBCE
T ss_pred cCCceEEEEE
Confidence 9855444444
No 258
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=2.2e-16 Score=88.02 Aligned_cols=85 Identities=21% Similarity=0.356 Sum_probs=69.0
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.+|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+..... ........|.|.++..+|+|.|+|.|.|
T Consensus 10 ~~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~---~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 85 (99)
T 2yr3_A 10 VAPSFSSVL-KDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARS---TCEAGVAELHIQDALPEDHGTYTCLAEN 85 (99)
T ss_dssp EEEEEEECC-CCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCC---EEETTEEEEEECSCCTTCCBCEEEEEEC
T ss_pred cCCceeecC-CCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccce---EeeCCeEEEEECCCChhhCEEEEEEEEE
Confidence 355566555 567899999999999999999999999999887765432 2233457899999999999999999999
Q ss_pred CCceeeEEE
Q psy16859 158 IYGSDRAFV 166 (168)
Q Consensus 158 ~~g~~~~~~ 166 (168)
..|.....+
T Consensus 86 ~~g~~~~~~ 94 (99)
T 2yr3_A 86 ALGQVSCSA 94 (99)
T ss_dssp SSCEEEEEC
T ss_pred CCCeEEEEE
Confidence 999887654
No 259
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.69 E-value=6.1e-17 Score=104.13 Aligned_cols=149 Identities=13% Similarity=0.147 Sum_probs=85.5
Q ss_pred ceEEEEECCEecCCCCCceEEEecCCC----EEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 4 PEVIWLRGNTPLPKSSPRFKYIEDSNN----LHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 4 p~v~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
.+|.|++||..+............ ++ ...|.|.....+|.|.|+|.+.+..+.......+..... ...+
T Consensus 58 i~v~W~k~g~~l~~~~~~~~~~~~-~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~------~~~~ 130 (240)
T 4acp_A 58 VKFNWYVDGVEVHNAKTKPREEQY-NSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG------QPRE 130 (240)
T ss_dssp CEEEEEETTEEECCCEECCCEEC----CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCS------CCBC
T ss_pred cEEEEEECCcccCCceeccceECC-CCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCC------CCCC
Confidence 389999999987321100000111 11 236888877778899999999987653322222221000 1234
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEcc-CCCC-eEEEeeCCEeccCCCCcEEE-ecC-C---EEEEEEccCCCCCCeeEE
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAG-SPKP-KVTWMKGIKDITTSSRTMTE-TVN-D---YVRLTLKRATDDENGTYF 152 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~W~~~~~~~~~~~~~~~~-~~~-~---~~~l~i~~~~~~d~g~y~ 152 (168)
|.+...+.... ...|..+.|.|.+.+ .|.+ .+.|++++..+......... ... . .+.|.+....+.+.|.|+
T Consensus 131 P~V~v~~~~~~-~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~yt 209 (240)
T 4acp_A 131 PQVYTLPPSRD-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFS 209 (240)
T ss_dssp CEEEEECCCGG-GGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEE
T ss_pred CEEEEECCChH-HhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEE
Confidence 44444442222 234889999999998 5554 79999999876432111111 111 1 245667666667789999
Q ss_pred EEEEcCCc
Q psy16859 153 IVARNIYG 160 (168)
Q Consensus 153 C~~~n~~g 160 (168)
|.|.|..-
T Consensus 210 C~V~h~~l 217 (240)
T 4acp_A 210 CSVMHEAL 217 (240)
T ss_dssp EEEECTTS
T ss_pred EEEEECCC
Confidence 99999753
No 260
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=3.5e-16 Score=87.37 Aligned_cols=86 Identities=21% Similarity=0.342 Sum_probs=68.1
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCC-CcEEEecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSS-RTMTETVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
..+|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ++.. . ...+|.|.++..+|+|.|+|.+
T Consensus 6 ~~~P~i~~~p-~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~-~--~~~~L~i~~v~~~d~G~Y~C~a 81 (100)
T 2edj_A 6 SGPPIILQGP-ANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATI-Q--EQGTLQIKNLRISDTGTYTCVA 81 (100)
T ss_dssp CSSCEEEECC-CCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEE-C--TTCCEEEESCCTTTCCEEEEEE
T ss_pred CCCCEEEeCc-CCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEE-c--CCCEEEEccCCcccCEEEEEEE
Confidence 3466677666 57788999999999999999999999999988776332 2222 1 2237999999999999999999
Q ss_pred EcCCceeeEEE
Q psy16859 156 RNIYGSDRAFV 166 (168)
Q Consensus 156 ~n~~g~~~~~~ 166 (168)
.|..|.....+
T Consensus 82 ~n~~g~~~~~~ 92 (100)
T 2edj_A 82 TSSSGETSWSA 92 (100)
T ss_dssp ECSSCCCBCCE
T ss_pred EcCCCCEEEEE
Confidence 99999876544
No 261
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.69 E-value=1.4e-15 Score=96.96 Aligned_cols=136 Identities=14% Similarity=0.139 Sum_probs=83.9
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccc-------ee--eEEEEEEEEeccCCCcccCCCCeEE-ecCCc
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYG-------YT--ETFARVDVINVSSGAVKHEKPAMFL-TRPDT 88 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-------~~--~~~~~l~v~~~~~~~~~~~~~~~~~-~~~~~ 88 (168)
.|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+..+ .. .....|.|.... ..+|.+. ..+
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~------~~~P~i~~~~~-- 137 (226)
T 3mlr_H 66 GQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGT------TKGPSVFPLAP-- 137 (226)
T ss_dssp TTBEEEEEGGGTEEEEEESSCCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCC------CBCCEEEEEEE--
T ss_pred CcEEEEecCCCCEEEEEECCCCcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCC------CCCCcEEEecC--
Confidence 57776543 24577899999999999999999976531 11 123456664322 1234443 222
Q ss_pred ceEeecCCeEEEEEEEcc-CC-CCeEEEeeCCEeccCCC--CcEEEecCC----EEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 89 MMSVALGEDISFSFRLAG-SP-KPKVTWMKGIKDITTSS--RTMTETVND----YVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 89 ~~~~~~g~~~~l~C~~~~-~p-~~~~~W~~~~~~~~~~~--~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
...+..|..+.|.|.+.+ .| .+.+.| ++..+.... ......... .+.|.|.....+| |.|+|.+.|..+
T Consensus 138 ~~~~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~ 214 (226)
T 3mlr_H 138 SSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 214 (226)
T ss_dssp EECSTTSSEEEEEEEEEEEBSSCCEEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGG
T ss_pred cccccCCCCEEEEEEEEEEECCCeEEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCC
Confidence 223457899999999987 44 457999 332221100 000111111 2468888888888 999999999887
Q ss_pred eeeEEE
Q psy16859 161 SDRAFV 166 (168)
Q Consensus 161 ~~~~~~ 166 (168)
......
T Consensus 215 ~~~~~~ 220 (226)
T 3mlr_H 215 NTKVDK 220 (226)
T ss_dssp TEEEEE
T ss_pred CcCeEE
Confidence 665444
No 262
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.68 E-value=3.5e-16 Score=89.75 Aligned_cols=89 Identities=21% Similarity=0.371 Sum_probs=71.8
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccC-CCCcEEEecC-CEEEEEEccCCCCCCeeEEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITT-SSRTMTETVN-DYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~-~~~~~~~~~~-~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
.+|.+...| ..+.+.+|+.+.|.|.+.|.|.+.+.|++++..+.. ..++...... ...+|.|.++..+|+|.|+|.|
T Consensus 14 ~~p~f~~~p-~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (116)
T 2kkq_A 14 RAPMFIYKP-QSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSA 92 (116)
T ss_dssp BCCCBSSCC-CCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEE
T ss_pred CCCeEEeCC-CcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEE
Confidence 456666666 578899999999999999999999999999988774 3444444333 3458999999999999999999
Q ss_pred EcCCceeeEEEE
Q psy16859 156 RNIYGSDRAFVT 167 (168)
Q Consensus 156 ~n~~g~~~~~~~ 167 (168)
.|..|.....+.
T Consensus 93 ~N~~G~~~~~~~ 104 (116)
T 2kkq_A 93 VNEAGVTTCNTR 104 (116)
T ss_dssp EETTEEEEEEEE
T ss_pred EcCCCeEEEEEE
Confidence 999998876554
No 263
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.68 E-value=1.9e-16 Score=104.31 Aligned_cols=138 Identities=15% Similarity=0.186 Sum_probs=80.6
Q ss_pred EEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEccccee-eEEEEEEEEeccCCCcccCCCCeEEe
Q psy16859 6 VIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYT-ETFARVDVINVSSGAVKHEKPAMFLT 84 (168)
Q Consensus 6 v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~ 84 (168)
|.|++++..+. .+...........+|.|.+++.+|+|.|+|.+.|..|.. .....+.|..... ..+.+..
T Consensus 28 v~W~~~~~~~~---~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p------~~~~~~~ 98 (289)
T 3mjg_X 28 VVWERMSQEPP---QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDP------TVGFLPN 98 (289)
T ss_dssp CEEEBTTBCCS---EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CCCEEEEEECCCT------TCCBCCC
T ss_pred EEEECCCCCcc---cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEECC------CcCcccC
Confidence 89999998772 222222221224689999999999999999999887652 2233444432210 1111111
Q ss_pred cCC-cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCcee
Q psy16859 85 RPD-TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 85 ~~~-~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
.+. ..+.+.+|+.+.|.|.+. .|.+.+.|++.+....... .. .... ..+ ...|+|.|+|.|.|..+..
T Consensus 99 ~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~--~~-~~~~-~~~-----~~~d~G~Y~C~a~n~~~~~ 167 (289)
T 3mjg_X 99 DAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPV--PY-DHQR-GFS-----GIFEDRSYICKTTIGDREV 167 (289)
T ss_dssp CHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCC--CE-ETTT-EEE-----ECCCSSEEEEEEEETTEEE
T ss_pred CCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccce--ee-cCCc-Cee-----eeccCcEEEEEEEeCCcee
Confidence 110 115688999999999998 6788899987642221111 00 1111 111 2568999999999876654
No 264
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.68 E-value=1.7e-16 Score=87.87 Aligned_cols=84 Identities=18% Similarity=0.306 Sum_probs=67.8
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.|+.+...+ ....+..|+.+.|.|.+.+.| +.+.|++++..+....++... ...|.|.++..+|+|.|+|.+.|
T Consensus 8 ~pp~~~~~~-~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n 81 (95)
T 2ckn_A 8 QPWGVPVEV-ESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT----GEEVEVRDSIPADSGLYACVTSS 81 (95)
T ss_dssp CSCCBTTBB-CCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC----SSEEEESSCCGGGSEEEEEEEEE
T ss_pred CCCEEEcCc-ceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe----CCEEEECCCChHHCEEEEEEecc
Confidence 345555445 567889999999999999987 799999999887765554332 23799999999999999999999
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
..|.....+.
T Consensus 82 ~~g~~~~~~~ 91 (95)
T 2ckn_A 82 PSGSDTTYFS 91 (95)
T ss_dssp TTEEEEEEEE
T ss_pred CCCcEEEEEE
Confidence 9998876654
No 265
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.68 E-value=2.3e-18 Score=119.59 Aligned_cols=154 Identities=10% Similarity=0.122 Sum_probs=96.0
Q ss_pred CCCc-eEEEEECCEecCC-------CCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCC
Q psy16859 1 YVKP-EVIWLRGNTPLPK-------SSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSG 72 (168)
Q Consensus 1 ~p~p-~v~W~~~~~~~~~-------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~ 72 (168)
+|.| +|.|++++..+.. ....+.. ...|.|.+++.+| |.|+|.+.|..+.......+.+......
T Consensus 147 ~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~------~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~ 219 (434)
T 1igy_B 147 FPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL------SSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCK 219 (434)
T ss_dssp BSSCCEEEETTTTBCSSEEECCCEECSSCEEE------EEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCC
T ss_pred cCCCeEEEEeeCCcCCCeEecCceecCCcEEE------EEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCc
Confidence 4777 9999999875310 0011111 2369999999889 9999999998877544444433110000
Q ss_pred --Cc-ccCCCCeEEecCCcceE-eecCCeEEEEEEEccCC----CCeEEEeeCCEeccCCCCcEE--Eec---CCEEEEE
Q psy16859 73 --AV-KHEKPAMFLTRPDTMMS-VALGEDISFSFRLAGSP----KPKVTWMKGIKDITTSSRTMT--ETV---NDYVRLT 139 (168)
Q Consensus 73 --~~-~~~~~~~~~~~~~~~~~-~~~g~~~~l~C~~~~~p----~~~~~W~~~~~~~~~~~~~~~--~~~---~~~~~l~ 139 (168)
.. ....|..+...| .... +..|+.+.|.|.+.|.+ .+.+.|++++..+........ ... ...+.|.
T Consensus 220 v~~~~~~~~p~v~~~~p-~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 298 (434)
T 1igy_B 220 PCICTVPEVSSVFIFPP-KPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALP 298 (434)
T ss_dssp CCCCCCSSSCCEEEECC-CHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEE
T ss_pred cccCCCCcCcEEEEeCC-ChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEE
Confidence 00 001133334333 2222 77899999999999874 357999998876543211110 000 1124688
Q ss_pred EccCCCCCCeeEEEEEEcCCcee
Q psy16859 140 LKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 140 i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
|..+..+|.|.|+|.|.|..|..
T Consensus 299 i~~~~~~d~G~Y~C~a~n~~~~~ 321 (434)
T 1igy_B 299 IMHQDWLNGKEFKCRVNSAAFPA 321 (434)
T ss_dssp CCHHHHHHTCCCBCCBCCSSCSS
T ss_pred ECHHHccCCCcEEEEEECCCCCC
Confidence 99999999999999999988854
No 266
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.68 E-value=2.1e-15 Score=97.91 Aligned_cols=137 Identities=18% Similarity=0.197 Sum_probs=82.8
Q ss_pred CCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccc-----------eeeEEEEEEEEeccCCCcccCCCCeEE-ec
Q psy16859 19 SPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYG-----------YTETFARVDVINVSSGAVKHEKPAMFL-TR 85 (168)
Q Consensus 19 ~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-----------~~~~~~~l~v~~~~~~~~~~~~~~~~~-~~ 85 (168)
..|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+..+ .......|.|.... ..+|.+. ..
T Consensus 88 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~ 161 (256)
T 3sob_H 88 KGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSAS------TKGPSVFPLA 161 (256)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSC------CBCCEEEEEC
T ss_pred CCcEEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCC------CCCCEEEEEC
Confidence 357776544 24677899999999999999999986431 11123456664321 1234443 34
Q ss_pred CCcceEeecCCeEEEEEEEcc-CC-CCeEEEeeCCEeccCCCC--cEEEecCC----EEEEEEccCCCCCCeeEEEEEEc
Q psy16859 86 PDTMMSVALGEDISFSFRLAG-SP-KPKVTWMKGIKDITTSSR--TMTETVND----YVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 86 ~~~~~~~~~g~~~~l~C~~~~-~p-~~~~~W~~~~~~~~~~~~--~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
+. ..+..|..++|.|.+.+ .| .+.+.| ++..+..... ........ .+.|.|.....+| |.|+|.+.|
T Consensus 162 ~~--~~~~~g~~v~L~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~ 236 (256)
T 3sob_H 162 PS--SKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNH 236 (256)
T ss_dssp CC-------TTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEE
T ss_pred CC--cccccCCcEEEEEEEEEEECCCeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEe
Confidence 42 23568999999999987 44 456999 4433221100 00111111 2468888888889 999999999
Q ss_pred CCceeeEEE
Q psy16859 158 IYGSDRAFV 166 (168)
Q Consensus 158 ~~g~~~~~~ 166 (168)
..+......
T Consensus 237 ~~~~~~~~~ 245 (256)
T 3sob_H 237 KPSNTKVDK 245 (256)
T ss_dssp GGGTEEEEE
T ss_pred CCCCcceEE
Confidence 886655433
No 267
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.68 E-value=1.7e-15 Score=91.15 Aligned_cols=89 Identities=21% Similarity=0.327 Sum_probs=73.2
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEec-CCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETV-NDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
.+|.+...+ ..+.+..|+.+.|.|.+.|.|.+.+.|++++..+....++..... .....|.|.++...|.|.|+|.|.
T Consensus 40 ~~P~~~~~~-~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 118 (154)
T 1fhg_A 40 VKPYFTKTI-LDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAV 118 (154)
T ss_dssp EEEEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEccC-CcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEE
Confidence 355666655 467899999999999999999999999999998887666655433 335689999999999999999999
Q ss_pred cCCceeeEEEE
Q psy16859 157 NIYGSDRAFVT 167 (168)
Q Consensus 157 n~~g~~~~~~~ 167 (168)
|..|.....+.
T Consensus 119 N~~G~~~~~~~ 129 (154)
T 1fhg_A 119 NSLGEATCTAE 129 (154)
T ss_dssp ETTEEEEEEEE
T ss_pred ECCCeEEEEEE
Confidence 99998876543
No 268
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=2.8e-16 Score=89.29 Aligned_cols=88 Identities=22% Similarity=0.329 Sum_probs=71.5
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEec-CCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETV-NDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
.+|.+...+ ..+.+..|+.+.|.|.+.+.|.+.+.|++++..+........... ....+|.|.++..+|+|.|+|.+.
T Consensus 8 ~~P~i~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 8 FRPHFLQAP-GDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp CCCEEEECC-CEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEE
T ss_pred CCCcEEeCC-CcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEE
Confidence 466777666 578899999999999999999999999999887766554443322 334689999999999999999999
Q ss_pred cCCceeeEEE
Q psy16859 157 NIYGSDRAFV 166 (168)
Q Consensus 157 n~~g~~~~~~ 166 (168)
|..|.....+
T Consensus 87 n~~g~~~~~~ 96 (110)
T 2dm3_A 87 NRAGQNSFSL 96 (110)
T ss_dssp CSSCEEEECC
T ss_pred CCCCEEEEEE
Confidence 9999876544
No 269
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.67 E-value=7.6e-16 Score=85.98 Aligned_cols=66 Identities=27% Similarity=0.505 Sum_probs=56.8
Q ss_pred CCCceEEEEECCEecCCC-CCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKS-SPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
+|.|+|.|++|++.+... ..++.+... ++..+|.|.+++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 32 ~P~p~v~W~k~g~~i~~~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 32 EPTPEVTWSCGGRKIHSQEQGRFHIENT-DDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp ESCCEEEEEETTEECCTTGGGTEEEEEC-SSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ecCCEEEEEECceEeeeeccceeeeecc-cceEEEEEcCCCccCCEEEEEEEEECCCEEEEEEEEEEE
Confidence 489999999999998533 346777766 677899999999999999999999999998888888884
No 270
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.67 E-value=2.4e-16 Score=89.20 Aligned_cols=86 Identities=20% Similarity=0.388 Sum_probs=61.0
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
+|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+....+..... ....|.|.++..+|+|.|+|.+.|.
T Consensus 10 ~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~n~ 86 (108)
T 3kvq_A 10 APTITGNL-ENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKD--GNRNLTIRRVRKEDEGLYTCQACSV 86 (108)
T ss_dssp -CCCBSCC-CCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEET--TTTEEEECSCCGGGCEEEEEEEC--
T ss_pred CCceecCC-CCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeC--CCcEEEEeecCcccCEEEEEEEEeC
Confidence 45555555 56788999999999999999999999999998776655544332 2347999999999999999999999
Q ss_pred CceeeEEEE
Q psy16859 159 YGSDRAFVT 167 (168)
Q Consensus 159 ~g~~~~~~~ 167 (168)
.|.....+.
T Consensus 87 ~g~~~~~~~ 95 (108)
T 3kvq_A 87 LGCAKVEAF 95 (108)
T ss_dssp --CEEEEEE
T ss_pred CCceEEEEE
Confidence 998876554
No 271
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=1.6e-15 Score=85.30 Aligned_cols=87 Identities=16% Similarity=0.228 Sum_probs=71.3
Q ss_pred CCeEEecCCcc--eEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 79 PAMFLTRPDTM--MSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 79 ~~~~~~~~~~~--~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
+|.+...+... +.+.+|+.+.|.|.+.+.|.+ +.|++++..+....++..........|.|.++..+|+|.|+|.+.
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 85 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTE 85 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECS
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEEC
Confidence 45555555332 678999999999999998888 999999999887777776666667789999999999999999999
Q ss_pred cCCceeeEEE
Q psy16859 157 NIYGSDRAFV 166 (168)
Q Consensus 157 n~~g~~~~~~ 166 (168)
|..+.....+
T Consensus 86 n~~~~~~l~V 95 (104)
T 2e6p_A 86 GVSAFFGVTV 95 (104)
T ss_dssp SCCCCEEEEE
T ss_pred CceEEEEEEE
Confidence 9877665554
No 272
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.67 E-value=1.7e-15 Score=85.82 Aligned_cols=89 Identities=24% Similarity=0.301 Sum_probs=65.1
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCC---CeEEEeeCCEec-cC--CCCcEEEe---c---CCEEEEEEccCCCC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPK---PKVTWMKGIKDI-TT--SSRTMTET---V---NDYVRLTLKRATDD 146 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~~~W~~~~~~~-~~--~~~~~~~~---~---~~~~~l~i~~~~~~ 146 (168)
.|.+...| ..+.+..|+.++|.|.+.|.|. +.+.|++++... .. ..++.... . .....|.|.+++.+
T Consensus 4 ~p~f~~~p-~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 4 IGLFVMRP-QDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCSCSBCC-CCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred ccEEEeCC-CcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 34555556 5788999999999999999988 999999976221 11 12222211 0 12468999999999
Q ss_pred CCeeEEEEEEcCCceeeEEEEC
Q psy16859 147 ENGTYFIVARNIYGSDRAFVTV 168 (168)
Q Consensus 147 d~g~y~C~~~n~~g~~~~~~~v 168 (168)
|+|.|+|.+.|..|..++.+.|
T Consensus 83 D~G~Y~C~a~N~~G~~~~~~~L 104 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDCSNFNL 104 (108)
T ss_dssp GCEEEEEEEECSSCEEEEEEEE
T ss_pred cCEEEEEEEecCCCceEEEEEE
Confidence 9999999999999998876643
No 273
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=1.3e-15 Score=85.54 Aligned_cols=80 Identities=23% Similarity=0.288 Sum_probs=67.8
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
..|+.+...+ ..+.+..|+.+.|.|.+.+ |.+.+.|++++..+....++..........|.|.++..+|+|.|+|.+.
T Consensus 6 ~~pp~~~~~~-~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (103)
T 2edf_A 6 SGPAAIIKPL-EDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVE 83 (103)
T ss_dssp CCCCCEEECC-CCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECS
T ss_pred CCCcEEEecC-CccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEc
Confidence 4566666666 5688999999999999987 8888999999998877777776666667789999999999999999999
Q ss_pred cC
Q psy16859 157 NI 158 (168)
Q Consensus 157 n~ 158 (168)
|.
T Consensus 84 n~ 85 (103)
T 2edf_A 84 AS 85 (103)
T ss_dssp SC
T ss_pred cC
Confidence 93
No 274
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.66 E-value=1.9e-16 Score=88.45 Aligned_cols=80 Identities=23% Similarity=0.390 Sum_probs=63.8
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcE-EEecCCEEEEEEccCCCCCCeeEEEEEEcCCceeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTM-TETVNDYVRLTLKRATDDENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 166 (168)
..+.+..|+.+.|.|.+.|.|.+.+.|++++..+....+.. .........|.|.++..+|+|.|+|.+.|..|.....+
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 95 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 95 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEE
Confidence 45678899999999999999999999999998876543321 11112224799999999999999999999999887665
Q ss_pred E
Q psy16859 167 T 167 (168)
Q Consensus 167 ~ 167 (168)
.
T Consensus 96 ~ 96 (100)
T 3caf_A 96 H 96 (100)
T ss_dssp E
T ss_pred E
Confidence 4
No 275
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.66 E-value=6.6e-15 Score=104.31 Aligned_cols=159 Identities=17% Similarity=0.178 Sum_probs=93.4
Q ss_pred CCCc-eEEEEECCEecCCCCCceEEEecCCC----EEEEEEcCCCCCCCeEEEEEEEcccceeeEEE-----------EE
Q psy16859 1 YVKP-EVIWLRGNTPLPKSSPRFKYIEDSNN----LHTLILSGVTAEEAGKYTCRVSNEYGYTETFA-----------RV 64 (168)
Q Consensus 1 ~p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~-----------~l 64 (168)
+|.| +|.|++++......... ..... ++ ...|.|.....+ .|.|+|.+.|..+...... .+
T Consensus 163 ~P~p~~v~W~~~~~~~~~~~~~-~~~~~-~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v 239 (512)
T 1zvo_C 163 HPTSVTVTWYMGTQSQPQRTFP-EIQRR-DSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASS 239 (512)
T ss_pred ecCceEEEEEcCcccCceEecC-ceecC-CCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEE
Confidence 4765 99999976432100000 00111 11 235889888777 8999999999877654433 23
Q ss_pred EEEeccC--CCc----------------------------------------ccCCCCeEEecCCcceEeecCCeEEEEE
Q psy16859 65 DVINVSS--GAV----------------------------------------KHEKPAMFLTRPDTMMSVALGEDISFSF 102 (168)
Q Consensus 65 ~v~~~~~--~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~g~~~~l~C 102 (168)
.+..++. ..+ ....+|.+...+.....+..|+.+.|.|
T Consensus 240 ~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C 319 (512)
T 1zvo_C 240 VPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTC 319 (512)
T ss_pred EEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEE
Confidence 3322111 000 0012333333332344466899999999
Q ss_pred EEccCCC--CeEEEeeCCEeccCCCC-cEEEe-cCC----EEEEEEccCCCCCCeeEEEEEEcCCcee
Q psy16859 103 RLAGSPK--PKVTWMKGIKDITTSSR-TMTET-VND----YVRLTLKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 103 ~~~~~p~--~~~~W~~~~~~~~~~~~-~~~~~-~~~----~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
.+.|..+ ..+.|++++..+..... ..... ... .+.|.|....++|.|.|+|.|.|..+..
T Consensus 320 ~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~ 387 (512)
T 1zvo_C 320 FVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPP 387 (512)
T ss_pred EEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCC
Confidence 9988533 37999999987552110 00110 111 2468899999999999999999987643
No 276
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.66 E-value=1.2e-15 Score=98.72 Aligned_cols=108 Identities=20% Similarity=0.347 Sum_probs=59.3
Q ss_pred CCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCC-----CCeEE
Q psy16859 39 VTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSP-----KPKVT 113 (168)
Q Consensus 39 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-----~~~~~ 113 (168)
++.+|+|.|+|.+. |.....+.+.+. .++.+...| ..+.+.+|+.++|.|.+.+.| .+.+.
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~----------~~~~~~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~ 76 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWL----------RELVMTQSP-LTLSVTIGQPASISCKSSQSLLYSNGKTYLN 76 (254)
T ss_dssp ----------------------------------------CCCEEEEC-SEEEECTTSCEEEEEEESSCCBCSSSCBCEE
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhhee----------eceeEEeCC-ceEEecCCCcEEEEeeccCcccccCCCCceE
Confidence 67899999999998 433333333331 133444445 578899999999999999877 37899
Q ss_pred EeeCC--Eec------------cCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 114 WMKGI--KDI------------TTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 114 W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
|+++. ..+ ....++.........+|.|.+++.+|+|.|+|.+.|..+
T Consensus 77 W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 137 (254)
T 2c1o_A 77 WLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFP 137 (254)
T ss_dssp EEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSS
T ss_pred EEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcc
Confidence 99732 211 112344444444556899999999999999999999854
No 277
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.65 E-value=1.5e-15 Score=85.29 Aligned_cols=77 Identities=16% Similarity=0.249 Sum_probs=63.6
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCC--CcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSS--RTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
|+.+...+ ..+.+.+|+.+.|.|.+.+ |.+.+.|++++..+.... ++..........|.|.++..+|+|.|+|.+.
T Consensus 7 p~~~~~~~-~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 84 (103)
T 1x44_A 7 GIMVTKQL-EDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTT 84 (103)
T ss_dssp SCCCSBCC-CCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEET
T ss_pred CceeeccC-CCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEEC
Confidence 33344444 5678999999999999987 778999999999887776 4466655666789999999999999999999
Q ss_pred c
Q psy16859 157 N 157 (168)
Q Consensus 157 n 157 (168)
|
T Consensus 85 n 85 (103)
T 1x44_A 85 G 85 (103)
T ss_dssp T
T ss_pred C
Confidence 8
No 278
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.65 E-value=2.8e-15 Score=84.13 Aligned_cols=76 Identities=26% Similarity=0.430 Sum_probs=61.2
Q ss_pred ecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEE--EecC---CEEEEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 93 ALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMT--ETVN---DYVRLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 93 ~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~--~~~~---~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
..+..+.|.|.+.|.|.|.+.|++++..+........ .... ..+.|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 4577899999999999999999999998877654322 1111 2356999999999999999999999999987765
Q ss_pred C
Q psy16859 168 V 168 (168)
Q Consensus 168 v 168 (168)
|
T Consensus 94 l 94 (103)
T 1wwb_X 94 A 94 (103)
T ss_dssp E
T ss_pred E
Confidence 3
No 279
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.65 E-value=1.8e-14 Score=102.06 Aligned_cols=149 Identities=12% Similarity=0.091 Sum_probs=90.4
Q ss_pred ceEEEEECCEecCCCCCceEEEecCCC----EEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 4 PEVIWLRGNTPLPKSSPRFKYIEDSNN----LHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 4 p~v~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
.+|.|++++..+......-......++ ...|.|..+..+|.|.|+|.+.|..+... ...+...... ....+
T Consensus 329 ~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~~----~~~~~ 403 (512)
T 1zvo_C 329 AHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPAA----QAPVK 403 (512)
T ss_pred eEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecCC----CCCCC
Confidence 499999999876311100001111122 24699999999999999999998865443 2222221100 00123
Q ss_pred CeEEecCCcceEeecCCeEE-EEEEEccCCCC--eEEEeeCCEeccCCCCc--E-EEecCC--E---EEEEEccCCCCCC
Q psy16859 80 AMFLTRPDTMMSVALGEDIS-FSFRLAGSPKP--KVTWMKGIKDITTSSRT--M-TETVND--Y---VRLTLKRATDDEN 148 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~-l~C~~~~~p~~--~~~W~~~~~~~~~~~~~--~-~~~~~~--~---~~l~i~~~~~~d~ 148 (168)
|.+...+... .|+.+. |.|.+.|.+++ .+.|++++..+...... . ...... . ..|.+.....+|.
T Consensus 404 p~v~~~~~~~----~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~ 479 (512)
T 1zvo_C 404 LSLNLLASSD----PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQP 479 (512)
T ss_pred CEEEEEccCc----CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCC
Confidence 4433333222 788899 99999985433 68999999887653211 1 111111 1 4577777778889
Q ss_pred eeEEEEEEcCCce
Q psy16859 149 GTYFIVARNIYGS 161 (168)
Q Consensus 149 g~y~C~~~n~~g~ 161 (168)
|.|+|.|.|....
T Consensus 480 g~YtC~v~h~~l~ 492 (512)
T 1zvo_C 480 ATYTCVVSHEDSR 492 (512)
T ss_pred CeEEEEEEecCCC
Confidence 9999999998654
No 280
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=9.1e-16 Score=86.29 Aligned_cols=84 Identities=21% Similarity=0.256 Sum_probs=68.1
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCC-CeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPK-PKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
.|+.+...+ ..+.+.+|+.+.|.|.+.+.|. +.+.|++++..+....++.........+|.|.+++.+|+|.|+|.+.
T Consensus 7 ~p~~~~~~~-~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 85 (104)
T 2eny_A 7 GHVGITKRL-KTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVR 85 (104)
T ss_dssp CCCCCSBCC-CCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEET
T ss_pred CCCEEEecC-CCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEEC
Confidence 344555445 5788999999999999998774 47999999999887777777666667799999999999999999997
Q ss_pred cCCcee
Q psy16859 157 NIYGSD 162 (168)
Q Consensus 157 n~~g~~ 162 (168)
|.....
T Consensus 86 ~~~~~a 91 (104)
T 2eny_A 86 GLTSKA 91 (104)
T ss_dssp TEEEEE
T ss_pred CeeEEE
Confidence 754333
No 281
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=1.2e-15 Score=87.67 Aligned_cols=85 Identities=24% Similarity=0.288 Sum_probs=67.8
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCC-CCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTS-SRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
.+|.+...+ ..+.+..|+.+.|.|.+.|.|.+.+.|++++..+... .++..... .+|.|.++..+|+|.|+|.+.
T Consensus 7 ~pP~i~~~p-~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~---~~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 7 GPPVIRQGP-VNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLEN---GVLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp CSCCCSBCC-CCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEET---TEEEEESCCGGGCCCEEEEEE
T ss_pred CCCEEEcCC-CCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccC---CEEEEccCCcCCCEEEEEEEE
Confidence 456666555 5678999999999999999999999999998877643 33333322 279999999999999999999
Q ss_pred cCCceeeEEE
Q psy16859 157 NIYGSDRAFV 166 (168)
Q Consensus 157 n~~g~~~~~~ 166 (168)
|..|.....+
T Consensus 83 n~~g~~~~~~ 92 (118)
T 2eo9_A 83 TPSGEATWSA 92 (118)
T ss_dssp CSSCEEEEEC
T ss_pred cCCCcEEEEE
Confidence 9999876543
No 282
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.65 E-value=7.5e-14 Score=95.44 Aligned_cols=146 Identities=14% Similarity=0.159 Sum_probs=99.0
Q ss_pred CCCceEEEEECCEecCCCC-CceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSS-PRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
+|.|.+.|++++..+.... .++.+... +...+|.|.+++.+|+|.|+|.+.|..|.....+.+.+...+. +
T Consensus 127 ~p~~~i~W~~~g~~l~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~-------~ 198 (389)
T 2jll_A 127 NPPASIHWRRDKLVLPAKNTTNLKTYST-GRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPS-------S 198 (389)
T ss_dssp ESCCEEEEEETTEESSCTTCTTEEEEEC-SSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCC-------C
T ss_pred cCCCeEEEEECCccCCcccCceEEEecc-CCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCC-------C
Confidence 4889999999999985432 46666655 5567899999999999999999999999887777777633221 2
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEcc----CCCC--eEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAG----SPKP--KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~----~p~~--~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
|... ......+..+.|.|.... .|.. .+.|...+.. .............+.|.++...+.+.|+|
T Consensus 199 P~~~-----~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~----~~~~~~~~~~~~~~~i~~l~~~~~y~~~v 269 (389)
T 2jll_A 199 PYGV-----KIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASE----IWKIVRSHGVQTMVVLNNLEPNTTYEIRV 269 (389)
T ss_dssp CEEE-----EEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCS----CCEEEECSTTCSEEEECSCCTTCEEEEEE
T ss_pred Ccce-----EEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCc----ccEEeeccCCcceEEECCccCCCEEEEEE
Confidence 2111 112234567888887432 2322 3667765431 11112222233578999999999999999
Q ss_pred EEEcCCceee
Q psy16859 154 VARNIYGSDR 163 (168)
Q Consensus 154 ~~~n~~g~~~ 163 (168)
.|.|..|...
T Consensus 270 ~A~N~~G~~~ 279 (389)
T 2jll_A 270 AAVNGKGQGD 279 (389)
T ss_dssp EEEESSCBCC
T ss_pred EEEcCCccCC
Confidence 9999988643
No 283
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=2.6e-15 Score=85.65 Aligned_cols=90 Identities=22% Similarity=0.395 Sum_probs=66.9
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccC---CCCeEEEeeCCE-eccC--CCCcEEEec-C-----CEEEEEEccCCC
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGS---PKPKVTWMKGIK-DITT--SSRTMTETV-N-----DYVRLTLKRATD 145 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~---p~~~~~W~~~~~-~~~~--~~~~~~~~~-~-----~~~~l~i~~~~~ 145 (168)
..+.+...| ..+.+.+|+.++|.|.+.+. |.|.+.|+++.. .+.. ..++.+... . ....|.|.++..
T Consensus 11 ~~~~f~~~P-~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 89 (118)
T 2edn_A 11 PTGVFLKKP-DSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVL 89 (118)
T ss_dssp CSSSCSBCC-CCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCT
T ss_pred CcceEEECC-CCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCCh
Confidence 344556666 68899999999999999875 788999999752 2221 223333211 1 146899999999
Q ss_pred CCCeeEEEEEEcCCceeeEEEEC
Q psy16859 146 DENGTYFIVARNIYGSDRAFVTV 168 (168)
Q Consensus 146 ~d~g~y~C~~~n~~g~~~~~~~v 168 (168)
.|+|.|+|.+.|..|..++.+.|
T Consensus 90 ~D~G~Y~Cevsn~~g~~s~~~~L 112 (118)
T 2edn_A 90 GDRGYYRLEVKAKDTCDSCGFNI 112 (118)
T ss_dssp TTCSCEEEEEECSSCEEEEEECC
T ss_pred hhCEEEEEEEEEcCCcEEEEEEE
Confidence 99999999999999998877654
No 284
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.64 E-value=3.1e-15 Score=97.51 Aligned_cols=137 Identities=14% Similarity=0.156 Sum_probs=81.2
Q ss_pred CCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEccc-----c-e-e-eEEEEEEEEeccCCCcccCCCCeEE-ecCCc
Q psy16859 19 SPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEY-----G-Y-T-ETFARVDVINVSSGAVKHEKPAMFL-TRPDT 88 (168)
Q Consensus 19 ~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-----~-~-~-~~~~~l~v~~~~~~~~~~~~~~~~~-~~~~~ 88 (168)
..|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+.. + . . .....|.|.... ..+|.+. ..+.
T Consensus 64 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~------~~~P~v~~~~~~- 136 (263)
T 3iu4_H 64 KSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAAS------TKGPSVFPLAPS- 136 (263)
T ss_dssp TTCEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSC------CBCCEEEEECCC-
T ss_pred CCCEEEEecCCCCEEEEEECCCCHHHCEEEEEEEEeCCCCccccccceeCCceEEEEeccc------CCCCEEEEccCc-
Confidence 357776543 2457789999999999999999998753 1 1 1 123466664321 1234443 3443
Q ss_pred ceEeecCCeEEEEEEEccC-C-CCeEEEeeCCEeccCCC--CcEEEecCC----EEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 89 MMSVALGEDISFSFRLAGS-P-KPKVTWMKGIKDITTSS--RTMTETVND----YVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 89 ~~~~~~g~~~~l~C~~~~~-p-~~~~~W~~~~~~~~~~~--~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
..+..|..+.|.|.+.+. | .+.+.| ++..+.... ......... .+.|.|.....+| |.|+|.+.|..+
T Consensus 137 -~~~~~g~~~~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~ 212 (263)
T 3iu4_H 137 -SKGSTSGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 212 (263)
T ss_dssp -CCC----EEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGG
T ss_pred -cccccCCcEEEEEEEEeEeCCceEEEE--CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCC
Confidence 234588999999999874 4 367999 333222100 000011111 2468888888888 999999999887
Q ss_pred eeeEEE
Q psy16859 161 SDRAFV 166 (168)
Q Consensus 161 ~~~~~~ 166 (168)
......
T Consensus 213 ~~~~~~ 218 (263)
T 3iu4_H 213 NTKVDK 218 (263)
T ss_dssp TEEEEE
T ss_pred CcceeE
Confidence 655443
No 285
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=3.4e-15 Score=83.90 Aligned_cols=85 Identities=21% Similarity=0.354 Sum_probs=67.4
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCC-CCcEEEecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTS-SRTMTETVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
..++.+...+.....+..|+.+.|.|.+ +.|.+.+.|++++..+... .++.....+....|.|.++..+|+|.|+|.+
T Consensus 13 ~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 91 (104)
T 1pd6_A 13 KKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVV 91 (104)
T ss_dssp STTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEE
T ss_pred cCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEE
Confidence 3455555555455789999999999999 6888899999999888776 6666665566678999999999999999999
Q ss_pred EcCCcee
Q psy16859 156 RNIYGSD 162 (168)
Q Consensus 156 ~n~~g~~ 162 (168)
.|..+..
T Consensus 92 ~~~~~~~ 98 (104)
T 1pd6_A 92 GGEKCST 98 (104)
T ss_dssp TTEEECC
T ss_pred CCCcEEE
Confidence 6644433
No 286
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=9.4e-16 Score=85.78 Aligned_cols=83 Identities=16% Similarity=0.286 Sum_probs=67.4
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCC----CcEEEecCCEEEEEEccCCCCCCeeEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSS----RTMTETVNDYVRLTLKRATDDENGTYF 152 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~g~y~ 152 (168)
..|+.+...+ ..+.+.+|+.+.|.|.+.+.| +.+.|++++..+.... ++..........|.|.++..+|+|.|+
T Consensus 6 ~~p~~~~~~~-~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 83 (101)
T 2edk_A 6 SGPVLIVTPL-EDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQ 83 (101)
T ss_dssp CCCCCEEECC-CCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEE
T ss_pred cCCCEEEecC-CceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEE
Confidence 3456666655 568899999999999999988 9999999998887665 446665566678999999999999999
Q ss_pred EEEEcCCce
Q psy16859 153 IVARNIYGS 161 (168)
Q Consensus 153 C~~~n~~g~ 161 (168)
|.+.|....
T Consensus 84 C~a~n~~~~ 92 (101)
T 2edk_A 84 VITNGGQCE 92 (101)
T ss_dssp EECSSCEEC
T ss_pred EEEcCCcEE
Confidence 999984433
No 287
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.63 E-value=1.2e-16 Score=92.52 Aligned_cols=89 Identities=19% Similarity=0.328 Sum_probs=69.5
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCe-EEEeeCCEeccC--CCCcEEE--ecCC--EEEEEEccCCCCCC-e
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPK-VTWMKGIKDITT--SSRTMTE--TVND--YVRLTLKRATDDEN-G 149 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~~~~~~~~--~~~~~~~--~~~~--~~~l~i~~~~~~d~-g 149 (168)
.+|.+.. + ....+.+|+.+.|.|.+.|.|.|. +.|++++..+.. ..++... .... ...|.|.++..+|. |
T Consensus 13 ~~P~i~~-~-~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G 90 (122)
T 2cry_A 13 GPPIISS-T-QTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQT 90 (122)
T ss_dssp SSCCEEE-E-CCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHS
T ss_pred cCCCccC-C-CeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCc
Confidence 3555555 4 467788999999999999999987 999999887764 2344432 1222 46899999999998 9
Q ss_pred eEEEEEEcCCceeeEEEEC
Q psy16859 150 TYFIVARNIYGSDRAFVTV 168 (168)
Q Consensus 150 ~y~C~~~n~~g~~~~~~~v 168 (168)
.|+|.|.|..|.....+.|
T Consensus 91 ~Y~C~a~N~~G~~~~~~~l 109 (122)
T 2cry_A 91 IYNCTAWNSFGSDTEIIRL 109 (122)
T ss_dssp CEEEEEECSSCEEEEEECC
T ss_pred eEEEEEECCCCeEEEEEEE
Confidence 9999999999999877654
No 288
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.63 E-value=5.5e-16 Score=89.37 Aligned_cols=87 Identities=21% Similarity=0.348 Sum_probs=63.7
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccC---CCCeEEEeeCCEe-cc--CCCCcEEEec--C----CEEEEEEccCCCCC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGS---PKPKVTWMKGIKD-IT--TSSRTMTETV--N----DYVRLTLKRATDDE 147 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~---p~~~~~W~~~~~~-~~--~~~~~~~~~~--~----~~~~l~i~~~~~~d 147 (168)
+.+...| ..+.+.+|+.++|.|.+.+. |.|.+.|+++... +. ...++.+... . ....|.|.++...|
T Consensus 8 ~~F~~~P-~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 86 (126)
T 2dav_A 8 ILFIEKP-QGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNF 86 (126)
T ss_dssp CSCCSCC-CCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTS
T ss_pred cEEEEcC-CCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCccc
Confidence 3455566 67889999999999999874 8899999997421 11 1223333211 1 13689999999999
Q ss_pred CeeEEEEEEcCCceeeEEEE
Q psy16859 148 NGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 148 ~g~y~C~~~n~~g~~~~~~~ 167 (168)
+|.|+|.+.|..|..++.++
T Consensus 87 aG~Y~Cevsn~~g~~~~~~~ 106 (126)
T 2dav_A 87 AGNYRCEVTYKDKFDSCSFD 106 (126)
T ss_dssp CEEEEEEEECSSCEEEECCE
T ss_pred CEEEEEEEEeCCCcEEEEEE
Confidence 99999999999998875543
No 289
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.63 E-value=1.2e-14 Score=81.07 Aligned_cols=77 Identities=25% Similarity=0.378 Sum_probs=64.8
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
.+|.+...+.....+..|+.+.|.|.+. .|.+.+.|++++..+....++..........|.|.++..+|+|.|+|.+
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE
Confidence 4666666664446788999999999998 6889999999999888777777666666678999999999999999999
No 290
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.63 E-value=4.5e-15 Score=85.32 Aligned_cols=72 Identities=21% Similarity=0.394 Sum_probs=59.6
Q ss_pred CeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecC----CEEEEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 96 EDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVN----DYVRLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 96 ~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
....|.|.+.|.|.+.+.|++++..+....+....... ....|.|.++...|+|.|+|.|.|..|.....+.
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~ 96 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTIN 96 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred cceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEE
Confidence 56788999999999999999999988776644433221 2468999999999999999999999999887765
No 291
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.62 E-value=8.4e-17 Score=101.86 Aligned_cols=123 Identities=14% Similarity=0.122 Sum_probs=77.9
Q ss_pred EEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CC
Q psy16859 31 LHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PK 109 (168)
Q Consensus 31 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~ 109 (168)
..+|.|.+++.+|+|.|.|.+.+..+.......+.+... ..+|.+...+.....+..|..+.|.|.+.|. |.
T Consensus 65 ~~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~i~~~~~-------~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~ 137 (214)
T 1ow0_A 65 SSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGN-------TFRPEVHLLPPPSEELALNELVTLTCLARGFSPK 137 (214)
T ss_dssp EEECTTTHHHHHHTCEEEEEECCSSCSSCEEEEEECCSS-------CCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSS
T ss_pred EEEEEEeHHHcCCCCeEEEEEecCCCCCceeEeeccCCC-------CCCCEEEecCCCHHHhccCCceEEEEEEeeeECC
Confidence 357889999999999999999987654333333321011 2355544333223335678899999999984 53
Q ss_pred -CeEEEeeCCEeccCCCCc---EEEe---cCC-E---EEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 110 -PKVTWMKGIKDITTSSRT---MTET---VND-Y---VRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 110 -~~~~W~~~~~~~~~~~~~---~~~~---~~~-~---~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
+.+.|++++..+...... .... ... . ..|.+....+++.|.|+|.|.|...
T Consensus 138 ~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 138 DVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp CCEEEEEETTEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred CcEEEEEECCEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 489999999887654211 1121 111 1 2344554444568999999999754
No 292
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=5.7e-15 Score=82.39 Aligned_cols=65 Identities=22% Similarity=0.370 Sum_probs=54.4
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
.|.|.+.|||||..+. ...++.+... +...+|.|.+++.+|+|.|+|.+.|. .....+.|.|..+
T Consensus 32 ~p~p~v~W~k~g~~l~-~~~r~~i~~~-~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~~a~L~V~~~ 96 (100)
T 2yuz_A 32 SENIPGKWTKNGLPVQ-ESDRLKVVQK-GRIHKLVIANALTEDEGDYVFAPDAY--NVTLPAKVHVISG 96 (100)
T ss_dssp SSCCCEEEEETTEECC-CCSSEEEEEC-SSEEEEEESSCCGGGCSEEEEEESSS--CCCEEEEEEEECC
T ss_pred CCCCeEEEEECCEECC-CCCcEEEEEe-CCEEEEEECCCChhhCEEEEEEEcCC--CeeEEEEEEEeCC
Confidence 4889999999999994 5568887777 66789999999999999999999987 4556778888643
No 293
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.62 E-value=3.4e-15 Score=86.03 Aligned_cols=68 Identities=18% Similarity=0.163 Sum_probs=53.5
Q ss_pred CCCceEEEEECCEecCCCCCceEEEec------CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIED------SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~------~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
+|.|+|+|+|||++|. ...++..... .....+|.|.+++..|+|.|+|.+.|..|....++.|.|...
T Consensus 27 ~P~P~I~W~knG~~l~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~~l~v~~~ 100 (126)
T 1he7_A 27 QPAPSLRWLFNGSVLN-ETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDN 100 (126)
T ss_dssp SSCCEEEEEETTEECC-CCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECCCSC
T ss_pred eCCCeEEEEECCEECC-CCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEEEEEEEcC
Confidence 6999999999999994 3444432211 012468999999999999999999999999988888888543
No 294
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.61 E-value=1.3e-14 Score=91.40 Aligned_cols=145 Identities=16% Similarity=0.145 Sum_probs=84.7
Q ss_pred ceEEEEECC--E---ecC------CCCCceEEEec--CCCEEEEEEcCCCCCCCeEEEEEEEcccc---------e--ee
Q psy16859 4 PEVIWLRGN--T---PLP------KSSPRFKYIED--SNNLHTLILSGVTAEEAGKYTCRVSNEYG---------Y--TE 59 (168)
Q Consensus 4 p~v~W~~~~--~---~~~------~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~---------~--~~ 59 (168)
+.|.|||.. . .+. ....|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+..+ . ..
T Consensus 30 ~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~p~~~~~~~~~~~ 109 (207)
T 1ypz_E 30 RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAADTWHISEGYELGTDKLVFG 109 (207)
T ss_dssp SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEEECBCCCTTCCCCCCCCEEC
T ss_pred eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEEecCCcccccccccceeeec
Confidence 479999843 1 110 12357766643 25567999999999999999999987642 1 11
Q ss_pred EEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CC-CeEEEeeCCEeccCCCCcEEEecCCEEE
Q psy16859 60 TFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PK-PKVTWMKGIKDITTSSRTMTETVNDYVR 137 (168)
Q Consensus 60 ~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 137 (168)
....|.|..... ...+|.+. +..+ .+.|.|.+.+. |. +.+.|+++ ..+................
T Consensus 110 ~~t~L~V~~~~~----~~~~P~v~--------~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l~~~~~~~~~~~~g~y~ 175 (207)
T 1ypz_E 110 QGTQVTVEPKSQ----PPAKPSVF--------IMKN-GTNVACLVKDFYPKEVTISLRSS-KKIVEFDPAIVISPSGKYS 175 (207)
T ss_dssp CCEEEEEECCCC----CCCCCEEE--------EEEE-TTEEEEEEEEESSSCCEEEEECS-SEEEECCCEEEECTTSSEE
T ss_pred CccEEEEccCCC----CCCCCeEE--------EeCC-CCeEEEEEeeEeCCCeEEEEecC-CcccCCccceEEcCCCcEE
Confidence 235677753211 01122221 1111 26899999874 54 68999998 5554321111111222222
Q ss_pred EEEccCCCCCCeeEEEEEEcCCceee
Q psy16859 138 LTLKRATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 138 l~i~~~~~~d~g~y~C~~~n~~g~~~ 163 (168)
+. .....++.|.|+|.+.|..+..+
T Consensus 176 ~~-~~~~~~~~~~ytC~v~~~~~~~~ 200 (207)
T 1ypz_E 176 AV-KLGQYGDSNSVTCSVQHNSETVH 200 (207)
T ss_dssp EE-ECEEESSTTTCEEEEEETTEEEE
T ss_pred EE-EeecccCCCcEEEEEEECCccEe
Confidence 22 22333678999999999887654
No 295
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.61 E-value=1.5e-14 Score=79.28 Aligned_cols=74 Identities=20% Similarity=0.306 Sum_probs=61.7
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
+.+...| ....+..|+.+.|.|.+.|.|.+.+.|++++..+..... ..|.|.++..+|+|.|+|.+.|..
T Consensus 4 ~~i~~~p-~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~a~n~~ 73 (91)
T 3bfo_A 4 LQICVEP-TSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDR 73 (91)
T ss_dssp CEEEECC-CCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCCS---------SEEEESSCCGGGCEEEEEEEECSS
T ss_pred eEEEECC-CccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCCC---------CeEEECCCCHHhCEEEEEEEEcCC
Confidence 3445555 467788999999999999999999999999987765321 379999999999999999999999
Q ss_pred ceee
Q psy16859 160 GSDR 163 (168)
Q Consensus 160 g~~~ 163 (168)
|...
T Consensus 74 g~~~ 77 (91)
T 3bfo_A 74 DSQD 77 (91)
T ss_dssp CEEE
T ss_pred CCEE
Confidence 9754
No 296
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.61 E-value=8.1e-15 Score=107.82 Aligned_cols=142 Identities=18% Similarity=0.197 Sum_probs=91.4
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCC-CCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCC
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTA-EEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~ 79 (168)
.|.|++.|.++|..+.. .. ...+.|..+.. +..+.|.|.+.+..|..... .+.+.... ...+
T Consensus 103 ~P~p~i~W~k~g~~~~~-~~----------~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~~~~~~-----~~~~ 165 (731)
T 2v5y_A 103 GPLGNPIWNISGDPTRT-WN----------RAELAISTFWPNFYQVIFEVITSGHQGYLAID-EVKVLGHP-----CTRT 165 (731)
T ss_dssp CCCCSEEEEECCCCCSS-CE----------EEEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBEEESSC-----CSSS
T ss_pred CCccceeEEEeCCcCCc-ee----------EEEEEEeecCCCceEEEEEEEecCCceEEEEe-eEEeeecc-----cccc
Confidence 48899999999987621 11 11355554422 23367788666666654321 12222211 1235
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEE-Ee--eCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVT-WM--KGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~-W~--~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
|.+. .+ ..+.+..|+.+.|.|.+.|.|.+.+. |+ +++..+...............+|.|.++...|.|.|+|.|.
T Consensus 166 p~~~-~~-~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~ 243 (731)
T 2v5y_A 166 PHFL-RI-QNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIR 243 (731)
T ss_dssp CEEC-CC-CCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEE
T ss_pred cccc-cc-cceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEE
Confidence 5554 44 46889999999999999999999877 88 56665543211110011123689999999999999999999
Q ss_pred cCCce
Q psy16859 157 NIYGS 161 (168)
Q Consensus 157 n~~g~ 161 (168)
|..|.
T Consensus 244 n~~G~ 248 (731)
T 2v5y_A 244 TEGGV 248 (731)
T ss_dssp ETTEE
T ss_pred CCCCC
Confidence 99997
No 297
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.61 E-value=1.7e-14 Score=79.73 Aligned_cols=76 Identities=25% Similarity=0.403 Sum_probs=63.5
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
+.+...+ ..+.+..|+.+.|.|.+ +.|.+.+.|++++..+....++..........|.|.++..+|+|.|+|.+.+
T Consensus 9 ~~~~~~~-~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ag~ 84 (95)
T 2k1m_A 9 SAFSKKP-RSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIAGS 84 (95)
T ss_dssp CCCSBCC-CCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEETT
T ss_pred CeeEeCC-CcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEECC
Confidence 3444444 57889999999999999 7888899999999988877777766666667899999999999999999944
No 298
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.60 E-value=9.7e-15 Score=83.28 Aligned_cols=75 Identities=16% Similarity=0.286 Sum_probs=62.8
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
.|+.+...+ ....+.+|+.+.|.|.+.+. +.+.|++++..+....++..........|.|.++..+|+|.|+|.+
T Consensus 18 ~pp~~~~~~-~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (113)
T 2edh_A 18 LPIKFTEGL-RNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC 92 (113)
T ss_dssp SCCCEEECC-CCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE
T ss_pred CCCcccccC-CceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe
Confidence 345665555 56789999999999999764 7899999999888777777766666678999999999999999999
No 299
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.60 E-value=1.5e-14 Score=80.40 Aligned_cols=84 Identities=23% Similarity=0.340 Sum_probs=63.3
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEc-cCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLA-GSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
++.+...+...+.+..|+.+.|.|.+. +.|.+.+.|++++....... ..... .+|.|.+++.+|+|.|+|.+.|
T Consensus 9 ~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~--~~~~~---~~L~i~~v~~~D~G~Y~C~a~n 83 (98)
T 1gl4_B 9 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSR--AMDFN---GILTIRNVQPSDAGTYVCTGSN 83 (98)
T ss_dssp CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTT--EEEET---TEEEECSCCGGGCEEEEEEEEC
T ss_pred CcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCce--eecCC---CEEEEeCCChhhCEEEEEEecC
Confidence 444444444677899999999999998 68999999998754332221 11112 2799999999999999999999
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
..|.....+.
T Consensus 84 ~~g~~~~~~~ 93 (98)
T 1gl4_B 84 MFAMDQGTAT 93 (98)
T ss_dssp SSCEEEEEEE
T ss_pred CCCccccEEE
Confidence 9998876654
No 300
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.60 E-value=7.2e-15 Score=79.25 Aligned_cols=59 Identities=22% Similarity=0.383 Sum_probs=49.2
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEE
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDV 66 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 66 (168)
|.|.|.|||||.+|. ...++.+... ++..+|.|.+++.+|+|.|+|.+.| ....+.|.|
T Consensus 23 p~p~v~W~k~g~~l~-~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a~l~V 81 (84)
T 2lu7_A 23 PGGPVRWYKDGERLA-SQGRVQLEQA-GARQVLRVQGARSGDAGEYLCDAPQ----DSRIFLVSV 81 (84)
T ss_dssp CSTTCEEEETTEECC-CCSSEEEEEC-SSCEEEEESSCSSTTCEEEEEECTT----TCEEEEEEE
T ss_pred CCcEEEEEECCEEcc-ccccEEEeec-CCeEEEEecCCCCcccEEEEEEECC----EEEEEEEEE
Confidence 789999999999994 5668887777 6778999999999999999998854 345667777
No 301
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.59 E-value=2.6e-14 Score=81.58 Aligned_cols=68 Identities=19% Similarity=0.280 Sum_probs=57.9
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEecc
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVS 70 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 70 (168)
+|.|++.|+|++..+. ...++.+... .....|.|.+++.+|+|.|+|.+.|..|.....+.|.|...+
T Consensus 34 ~p~p~i~W~k~~~~~~-~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 101 (114)
T 2cqv_A 34 TQPITCTWMKFRKQIQ-ESEHMKVENS-ENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKP 101 (114)
T ss_dssp SSSCEEEEEESSSBCC-CSSSEEEEEC-SSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEEECSC
T ss_pred CCCCEEEEEECCEECc-CCCCEEEEEc-CCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEEEEECCC
Confidence 5889999999999884 4557777765 566799999999999999999999999988888889987544
No 302
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.59 E-value=2.6e-14 Score=81.88 Aligned_cols=70 Identities=29% Similarity=0.443 Sum_probs=59.0
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEecc
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVS 70 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 70 (168)
+|.|.+.|++++..+.....++.+.....+..+|.|.+++.+|+|.|+|.+.|..|.....+.|.|..++
T Consensus 42 ~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p 111 (116)
T 2kkq_A 42 IPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARP 111 (116)
T ss_dssp BSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEECCS
T ss_pred cCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEEeCCC
Confidence 4889999999999986556788777663556789999999999999999999999998888888886543
No 303
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.58 E-value=3.3e-14 Score=79.67 Aligned_cols=79 Identities=15% Similarity=0.256 Sum_probs=65.2
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.||.+...+ ..+.+.+|+.+.|.|.+.+.|.+ +.|++++..+....++..........|.|.++..+|+|.|+|.+.+
T Consensus 7 ~pp~~~~~~-~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~g~ 84 (103)
T 2e7b_A 7 GPVRFQEAL-KDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCSFGD 84 (103)
T ss_dssp CCCCCTBCC-CCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEECSS
T ss_pred CCCEEEecC-ccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEEECC
Confidence 455555545 57889999999999999998888 9999999888777777776666667899999999999999998444
Q ss_pred C
Q psy16859 158 I 158 (168)
Q Consensus 158 ~ 158 (168)
.
T Consensus 85 ~ 85 (103)
T 2e7b_A 85 Q 85 (103)
T ss_dssp C
T ss_pred c
Confidence 3
No 304
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.58 E-value=5.9e-14 Score=81.04 Aligned_cols=83 Identities=12% Similarity=0.141 Sum_probs=59.8
Q ss_pred cCCcceEeecCCeEEEEEEEcc--CCCCeEEEeeCCEeccC-----CCCcEEEec---CCEEEEEEccCCCCCCeeEEEE
Q psy16859 85 RPDTMMSVALGEDISFSFRLAG--SPKPKVTWMKGIKDITT-----SSRTMTETV---NDYVRLTLKRATDDENGTYFIV 154 (168)
Q Consensus 85 ~~~~~~~~~~g~~~~l~C~~~~--~p~~~~~W~~~~~~~~~-----~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~ 154 (168)
.|...+.+.+|+.+.|.|.+.| .|.+.+.|++++..+.. ......... .....|.|.+++.+|+|.|+|.
T Consensus 13 ~p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 92 (122)
T 3s35_X 13 SPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCA 92 (122)
T ss_dssp ESCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEE
T ss_pred cCCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEE
Confidence 3434567889999999999998 44568999997764321 111111111 1235799999999999999999
Q ss_pred EEcCCceeeEEEE
Q psy16859 155 ARNIYGSDRAFVT 167 (168)
Q Consensus 155 ~~n~~g~~~~~~~ 167 (168)
|.|..|.....+.
T Consensus 93 a~n~~g~~~~~~~ 105 (122)
T 3s35_X 93 ASSGLMTKKNSTF 105 (122)
T ss_dssp EECSSCEEEEEEE
T ss_pred EccCCCceEEEEE
Confidence 9999998876554
No 305
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.58 E-value=3.9e-14 Score=79.35 Aligned_cols=65 Identities=23% Similarity=0.425 Sum_probs=56.3
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
+|.|.+.|++++..+. ...++.+... ....+|.|.+++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 35 ~p~p~i~W~k~~~~~~-~~~~~~~~~~-~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 99 (103)
T 3qp3_A 35 KPTAEVKWYHNGVELQ-ESSKIHYTNT-SGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVT 99 (103)
T ss_dssp ESCCEEEEEETTEECC-CCSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCCCEEEEEECCEECC-CCCCEEEEEC-CCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 4889999999999984 4457777766 667789999999999999999999999998888888885
No 306
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=3.5e-14 Score=78.94 Aligned_cols=66 Identities=23% Similarity=0.338 Sum_probs=54.1
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
+|.|.+.|++++..+.. ..++.......+..+|.|.+++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 32 ~p~p~v~W~k~g~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 32 KPDPECEWYKNGVKIER-SDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQ 97 (99)
T ss_dssp ESCCEEEEEETTEECCC-CSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eCCCEEEEEECCEECCC-CCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEEEEEe
Confidence 48899999999999853 4455544322566789999999999999999999999998888888884
No 307
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=6.2e-15 Score=82.13 Aligned_cols=75 Identities=19% Similarity=0.344 Sum_probs=61.6
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
..+.+..|+.+.|.|.+.+.| +.+.|++++..+....+.... ...|.|.++...|+|.|+|.+.|..|.....+.
T Consensus 11 ~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 85 (99)
T 2cr3_A 11 ESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT----GEEVEVQDSVPADSGLYACVTSSPSGSDTTYFS 85 (99)
T ss_dssp EECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC----SSEEEETTCCTTTCEEEEEEEEETTEEEEEEEE
T ss_pred cCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE----CCEEEEccCCHHHCEEEEEEEEeCCceEEEEEE
Confidence 456678999999999999876 799999999877655544332 237999999999999999999999998876654
No 308
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.58 E-value=2.6e-14 Score=79.49 Aligned_cols=66 Identities=35% Similarity=0.566 Sum_probs=55.3
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
+|.|.+.|++++..+.....++..... ++..+|.|.+++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 32 ~p~p~v~W~k~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 32 EPKPVVSWLRNRQPVRPDQRRFAEEAE-GGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVR 97 (99)
T ss_dssp ESCCEEEEEETTEECCCBTTEEEEECG-GGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCCCEEEEEECCEECCCCCCEEEEECC-CCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEEEEEE
Confidence 488999999999998655555555555 666789999999999999999999999998888888874
No 309
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.57 E-value=2.8e-14 Score=80.65 Aligned_cols=81 Identities=16% Similarity=0.238 Sum_probs=65.9
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
..||.+...+ ..+.+.+|+.+.|.|.+.+. +.+.|++++..+....++..........|.|.+++.+|+|.|+|.+.
T Consensus 6 ~~pp~~~~~~-~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 82 (108)
T 2dm7_A 6 SGPARFTQDL-KTKEASEGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCG 82 (108)
T ss_dssp CCCCCBCSCC-BCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEET
T ss_pred CCCCeeeecC-CcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEc
Confidence 3456665555 57889999999999999765 68999999988887777776666667789999999999999999997
Q ss_pred cCCc
Q psy16859 157 NIYG 160 (168)
Q Consensus 157 n~~g 160 (168)
|...
T Consensus 83 n~~~ 86 (108)
T 2dm7_A 83 QERT 86 (108)
T ss_dssp TEEE
T ss_pred CCEE
Confidence 6433
No 310
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.57 E-value=9.2e-15 Score=83.86 Aligned_cols=85 Identities=25% Similarity=0.452 Sum_probs=61.4
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCC----cEEEecCC-EEEEEE--ccCCCCCCee
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSR----TMTETVND-YVRLTL--KRATDDENGT 150 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~----~~~~~~~~-~~~l~i--~~~~~~d~g~ 150 (168)
.||.+...| ....+..|+.+.|.|.+.|.|.|.+.|++++..+..... ........ ...+.| .++..+|+|.
T Consensus 8 ~pP~i~~~p-~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~ 86 (117)
T 2v9t_A 8 FPPRIVEHP-SDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (117)
T ss_dssp EEEEEEECC-CCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEE
T ss_pred CCCeeEcCC-CCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEE
Confidence 356666666 567889999999999999999999999999988764421 11111121 112222 2557899999
Q ss_pred EEEEEEcCCceee
Q psy16859 151 YFIVARNIYGSDR 163 (168)
Q Consensus 151 y~C~~~n~~g~~~ 163 (168)
|+|.|.|..|...
T Consensus 87 Y~C~a~N~~G~~~ 99 (117)
T 2v9t_A 87 YVCVARNYLGEAV 99 (117)
T ss_dssp EEEEEEETTEEEE
T ss_pred EEEEEEeCccceE
Confidence 9999999999876
No 311
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=8.3e-14 Score=78.86 Aligned_cols=78 Identities=21% Similarity=0.209 Sum_probs=62.6
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCC----------CcEEEecCCEEEEEEccCCCCC
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSS----------RTMTETVNDYVRLTLKRATDDE 147 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~----------~~~~~~~~~~~~l~i~~~~~~d 147 (168)
.++.+...+ ....+.+|+.+.|.|.+.+ .+.+.|++++..+.... ++.+...+...+|.|.++..+|
T Consensus 7 p~~~~~~~l-~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D 83 (112)
T 2e6q_A 7 GTARLVAGL-EDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQD 83 (112)
T ss_dssp SCCCEEECC-CCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTT
T ss_pred CCcEEecCC-CCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHH
Confidence 345555555 6789999999999999987 77899999999998776 5555555556789999999999
Q ss_pred CeeEEEEEEcC
Q psy16859 148 NGTYFIVARNI 158 (168)
Q Consensus 148 ~g~y~C~~~n~ 158 (168)
+|.|+|...+.
T Consensus 84 ~G~Y~~~~~~~ 94 (112)
T 2e6q_A 84 SGALVGFSCPG 94 (112)
T ss_dssp CSEEEEEEETT
T ss_pred CccEEEEEECC
Confidence 99998855543
No 312
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=8.9e-14 Score=79.21 Aligned_cols=67 Identities=18% Similarity=0.333 Sum_probs=58.9
Q ss_pred eEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 90 MSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 90 ~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
+.+..|+.+.|.|.+. .|.+.+.|++++..+....++..........|.|.++..+|+|.|+|.+.|
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 89 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD 89 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec
Confidence 5678999999999995 788899999999998877777766655567899999999999999999999
No 313
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.57 E-value=6.3e-14 Score=79.46 Aligned_cols=84 Identities=20% Similarity=0.275 Sum_probs=63.0
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccC--CCCeEEEeeCCEeccCCCCcEEEec-C-------CEEEEEEccCCCCC
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGS--PKPKVTWMKGIKDITTSSRTMTETV-N-------DYVRLTLKRATDDE 147 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~--p~~~~~W~~~~~~~~~~~~~~~~~~-~-------~~~~l~i~~~~~~d 147 (168)
.+|.+...| ....+..|+.+.|.|.+.+. +.+.+.|++++..+........... . ....|.|.++..+|
T Consensus 9 ~~P~i~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (112)
T 3so5_A 9 PXPQITVQP-ETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTS 87 (112)
T ss_dssp CSCEEEECC-CCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGG
T ss_pred CCCeEEeCC-CCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccccc
Confidence 456666666 46788999999999999854 4678999999987765321111111 1 13689999999999
Q ss_pred CeeEEEEEEcCCcee
Q psy16859 148 NGTYFIVARNIYGSD 162 (168)
Q Consensus 148 ~g~y~C~~~n~~g~~ 162 (168)
+|.|+|.|.|..|..
T Consensus 88 ~G~Y~C~a~n~~g~~ 102 (112)
T 3so5_A 88 EGXYQCVISNHFGSS 102 (112)
T ss_dssp CEEEEEEEEETTEEE
T ss_pred CCeEEEEEEeCCCcE
Confidence 999999999999973
No 314
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.57 E-value=2.7e-14 Score=84.21 Aligned_cols=65 Identities=25% Similarity=0.368 Sum_probs=53.7
Q ss_pred CCCceEEEEECC----------------------------EecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEE
Q psy16859 1 YVKPEVIWLRGN----------------------------TPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVS 52 (168)
Q Consensus 1 ~p~p~v~W~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 52 (168)
+|.|+|.|+|++ ..+.....++.+... +....|.|.+++.+|+|.|+|.+.
T Consensus 45 ~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~-~~~s~L~I~~v~~~DsG~Y~C~A~ 123 (139)
T 1gxe_A 45 DPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETT-KDRSIFTVEGAEKEDEGVYTVTVK 123 (139)
T ss_dssp BSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEE-TTEEEEECSCCCTTTCEEEEEEEE
T ss_pred cCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeC-CCEEEEEECCCCcccCEEEEEEEE
Confidence 589999999998 444334557766655 556789999999999999999999
Q ss_pred cccceeeEEEEEEE
Q psy16859 53 NEYGYTETFARVDV 66 (168)
Q Consensus 53 ~~~~~~~~~~~l~v 66 (168)
|..|.....+.|.|
T Consensus 124 N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 124 NPVGEDQVNLTVKV 137 (139)
T ss_dssp CSSCEEEEEEEEEE
T ss_pred eCCceEEEEEEEEE
Confidence 99998888888877
No 315
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=5.8e-14 Score=80.63 Aligned_cols=65 Identities=20% Similarity=0.406 Sum_probs=55.1
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEe
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVIN 68 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 68 (168)
+|.|++.|++++..+. ..++.+... .....|.|.+++.+|+|.|+|.+.|..|.....+.|.|..
T Consensus 51 ~P~p~i~W~k~g~~l~--~~~~~~~~~-~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 115 (118)
T 2e7c_A 51 KPRPQVVWTKGGAPLD--TSRVHVRTS-DFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVE 115 (118)
T ss_dssp ESCCEEEEEETTEECC--CSSCEEEEC-SSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEEEEEC
T ss_pred CCCCEEEEEECCEECC--CCcEEEEEC-CCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 4889999999999984 346666655 6667899999999999999999999999888888888854
No 316
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.57 E-value=5.5e-14 Score=78.29 Aligned_cols=66 Identities=26% Similarity=0.481 Sum_probs=53.2
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
+|.|.+.|++++..+............ .+..+|.|.+++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 32 ~p~p~v~W~~~g~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (100)
T 2kdg_A 32 LPAPDVSWYLNGRTVQSDDLHKMIVSE-KGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVL 97 (100)
T ss_dssp ESCCEEEEEETTEEECCCSSSCEEEET-TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eCCCEEEEEECCEECcCCCcEEEEEcC-CCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEEE
Confidence 488999999999988543322333333 556789999999999999999999999998888888885
No 317
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.56 E-value=1e-13 Score=86.17 Aligned_cols=88 Identities=19% Similarity=0.309 Sum_probs=74.2
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.+|.+...+ ..+.+..|+.+.|.|.+.+.|.+.+.|++++..+....++.........+|.|.++..+|+|.|+|.+.|
T Consensus 6 ~~P~~~~~~-~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 6 EAPGIRKEM-KDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp EEEEEEECC-CCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCcccccC-CceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 355566656 5778999999999999999999999999999988877777766666667899999999999999999999
Q ss_pred CCceeeEEE
Q psy16859 158 IYGSDRAFV 166 (168)
Q Consensus 158 ~~g~~~~~~ 166 (168)
..|.....+
T Consensus 85 ~~~~~~~~~ 93 (197)
T 3lcy_A 85 EVGEVETSS 93 (197)
T ss_dssp SSCEEEEEE
T ss_pred CCCceeEEE
Confidence 988776544
No 318
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.56 E-value=8.7e-14 Score=87.91 Aligned_cols=87 Identities=13% Similarity=0.235 Sum_probs=70.9
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCC--CcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSS--RTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
+|.+ ..+ ..+.+..|+.+.|.|.+.|.|.+.+.|++++..+.... ++..........|.|.++..+|.|.|+|.|.
T Consensus 19 ~P~~-~~p-~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 19 APKL-QGP-VAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp EEEE-ECC-SEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred CCcc-cCC-ceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 4555 344 45788899999999999999999999999999887653 4444444556789999999999999999999
Q ss_pred cCCceeeEEEE
Q psy16859 157 NIYGSDRAFVT 167 (168)
Q Consensus 157 n~~g~~~~~~~ 167 (168)
|..|.....+.
T Consensus 97 n~~g~~~~~~~ 107 (215)
T 3mtr_A 97 NRIGQESLEFI 107 (215)
T ss_dssp CSSCEEEEEEE
T ss_pred ECCCceEEEEE
Confidence 99998875553
No 319
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.56 E-value=1.3e-13 Score=90.06 Aligned_cols=134 Identities=16% Similarity=0.209 Sum_probs=81.7
Q ss_pred CceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcc------cc--------------e-----eeEEEEEEEEeccCCC
Q psy16859 20 PRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNE------YG--------------Y-----TETFARVDVINVSSGA 73 (168)
Q Consensus 20 ~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~------~~--------------~-----~~~~~~l~v~~~~~~~ 73 (168)
.|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+. .+ . ......|.|....
T Consensus 89 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~--- 165 (267)
T 3u1s_H 89 GRVTITRDSGASTVYMELRGLTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSAS--- 165 (267)
T ss_dssp TTEEEEECGGGCCEEEEECSCCGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCC---
T ss_pred CcEEEEEcCCCCEEEEEECCCChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCC---
Confidence 57776654 235678999999999999999999621 01 1 1113456664211
Q ss_pred cccCCCCeEE-ecCCcceEeecCCeEEEEEEEcc-CC-CCeEEEeeCCEeccCCCC--cEEEecCC----EEEEEEccCC
Q psy16859 74 VKHEKPAMFL-TRPDTMMSVALGEDISFSFRLAG-SP-KPKVTWMKGIKDITTSSR--TMTETVND----YVRLTLKRAT 144 (168)
Q Consensus 74 ~~~~~~~~~~-~~~~~~~~~~~g~~~~l~C~~~~-~p-~~~~~W~~~~~~~~~~~~--~~~~~~~~----~~~l~i~~~~ 144 (168)
..+|.+. ..+... ...|..+.|.|.+.+ .| .+.+.| ++..+..... ........ .+.|.|....
T Consensus 166 ---~~~P~v~~~~~~~~--~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~ 238 (267)
T 3u1s_H 166 ---TKGPSVFPLAPSSK--STSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSS 238 (267)
T ss_dssp ---CBCCEEEEECCCGG--GEETTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGG
T ss_pred ---CCCCEEEEecCCcc--cCCCCcEEEEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchh
Confidence 1234443 344322 357899999999986 45 467999 4433321100 00111111 1468888888
Q ss_pred CCCCeeEEEEEEcCCceeeE
Q psy16859 145 DDENGTYFIVARNIYGSDRA 164 (168)
Q Consensus 145 ~~d~g~y~C~~~n~~g~~~~ 164 (168)
.+| +.|+|.+.|..+....
T Consensus 239 ~~~-~~ytC~v~h~~~~~~~ 257 (267)
T 3u1s_H 239 LGT-QTYICNVNHKPSNTKV 257 (267)
T ss_dssp GGT-CCCEEEEEEGGGTEEE
T ss_pred cCC-CEEEEEEEECCCCcce
Confidence 888 9999999998765443
No 320
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.56 E-value=1.3e-12 Score=83.69 Aligned_cols=127 Identities=20% Similarity=0.325 Sum_probs=88.9
Q ss_pred CceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeE
Q psy16859 3 KPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMF 82 (168)
Q Consensus 3 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~ 82 (168)
..++.|+|++.++.. . . ..|.|..++..|+|.|+|.+.+..+.......+.|... ..+.+
T Consensus 35 pyTYqWyKDG~~IsG-a---------T--~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~VtVT~~--------a~l~i 94 (304)
T 3shs_A 35 NLTYTWTKDDQPHEN-N---------T--ATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEE--------AELIV 94 (304)
T ss_dssp CEEEEEEETTEECSC-C---------S--SEEEESSCCGGGCEEEEEEEEETTTCCEEECCCEEECB--------CCEEE
T ss_pred CceEEEEECCccccC-C---------c--ceEEeeeccccCCeEEEEEEEECCCCeeeeeeEEEecc--------CceeE
Confidence 348999999988731 1 1 27999999999999999999987776544434444321 11223
Q ss_pred EecCCcceEeecCCeEEEEEEE--cc-CC-----CCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEE
Q psy16859 83 LTRPDTMMSVALGEDISFSFRL--AG-SP-----KPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIV 154 (168)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~C~~--~~-~p-----~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 154 (168)
....+....+..+..+.|.+.+ .| .| ...+.|++++..+.... .+.+......+.|.|+|.
T Consensus 95 ~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgAq-----------~lT~sS~TateaG~YtV~ 163 (304)
T 3shs_A 95 NITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQ-----------DITIQEFTADKNGVYTVK 163 (304)
T ss_dssp EESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESSS-----------EEEECSCCGGGCEEEEEE
T ss_pred EecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCcc-----------ccceeeEEecCCeEEEEE
Confidence 3322245556677788998887 44 34 45899999998765322 467777788899999999
Q ss_pred EEcCCc
Q psy16859 155 ARNIYG 160 (168)
Q Consensus 155 ~~n~~g 160 (168)
+.|..+
T Consensus 164 VTn~~~ 169 (304)
T 3shs_A 164 VWGESE 169 (304)
T ss_dssp EESSSG
T ss_pred EEcCCC
Confidence 999865
No 321
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.56 E-value=8.4e-14 Score=77.15 Aligned_cols=63 Identities=25% Similarity=0.554 Sum_probs=54.8
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEE
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDV 66 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 66 (168)
|.|.+.|++++..+. ...++.+... ++..+|.|.+++.+|+|.|+|.+.|..|.....+.|.|
T Consensus 30 p~~~v~W~~~~~~~~-~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 92 (97)
T 2bk8_A 30 QSTQVTWYFGVRQLE-NSEKYEITYE-DGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFV 92 (97)
T ss_dssp TTCEEEEEETTEECC-SSSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCEEEEEECCEECc-CCCCEEEEEc-CCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEEEEE
Confidence 889999999999884 4567776655 66779999999999999999999999998888888887
No 322
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=2.3e-14 Score=81.27 Aligned_cols=70 Identities=21% Similarity=0.378 Sum_probs=58.9
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEecc
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVS 70 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 70 (168)
+|.|.+.|++++..+.....++.+.....+...|.|.+++.+|+|.|+|.+.|..|.....+.|.|..++
T Consensus 35 ~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~~ 104 (110)
T 2dm2_A 35 NPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVN 104 (110)
T ss_dssp SSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECCCEEEECCS
T ss_pred cCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEEECCC
Confidence 5889999999999886556677776654566789999999999999999999999998888888886543
No 323
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.56 E-value=1.6e-14 Score=81.01 Aligned_cols=66 Identities=24% Similarity=0.292 Sum_probs=51.6
Q ss_pred CCCceEEEEECCEecCCCCCceE--EEec--CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFK--YIED--SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~--~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
+|.|++.|+|+++.+... .+.. +... .....+|.|.+++.+|+|.|+|.+.|..|....++.|.|.
T Consensus 28 ~P~P~i~W~k~g~~l~~~-~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~V~ 97 (103)
T 1wwb_X 28 NPKPALQWFYNGAILNES-KYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFM 97 (103)
T ss_dssp SSCCEEEEEETTEEECCC-SSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECCS
T ss_pred eCCCEEEEEECCEECCCC-CcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEEC
Confidence 599999999999998543 3432 2111 1223569999999999999999999999999888888884
No 324
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.55 E-value=7.7e-14 Score=77.52 Aligned_cols=65 Identities=22% Similarity=0.455 Sum_probs=55.9
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
+|.|.+.|++++..+. ...++.+... .+..+|.|.+++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 33 ~p~p~v~W~~~g~~~~-~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 33 EPRPTAIWTKDGKAIT-QGGKYKLSED-KGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIK 97 (99)
T ss_dssp ESCCEEEEEETTEECC-SSSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCCCEEEEEECCEECc-CCCCEEEEEe-CCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEEE
Confidence 4789999999999984 4567877766 666789999999999999999999999988888888874
No 325
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.54 E-value=3.8e-14 Score=78.26 Aligned_cols=74 Identities=23% Similarity=0.298 Sum_probs=61.2
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
....+..|+.+.|.|.+.+ .|.+.|++++..+....+.... . ..|.|.++..+|+|.|+|.+.|..|.....+.
T Consensus 9 ~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~--~--~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 82 (95)
T 4hwu_A 9 EAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLI--G--EYLQIKGATPRDSGLYACTAARTVDSETWIFM 82 (95)
T ss_dssp EEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEE--T--TEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEe--C--CEEEECcCCcccCEEEEEEEccCCCcEEEEEE
Confidence 5677889999999999986 5799999999988766554432 2 37999999999999999999999998776554
No 326
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.54 E-value=4.4e-14 Score=83.24 Aligned_cols=85 Identities=18% Similarity=0.276 Sum_probs=64.8
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCC----------CCcEEE---ecCCEEEEEEccC
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTS----------SRTMTE---TVNDYVRLTLKRA 143 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~----------~~~~~~---~~~~~~~l~i~~~ 143 (168)
..||.+...| ..+.+..|+.+.|.|.+.|.|.+.+.|++++..+... .+.... .......|.|.++
T Consensus 19 ~~pP~~~~~p-~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 97 (137)
T 3qr2_A 19 SHMAGFVQAP-LSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTL 97 (137)
T ss_dssp --CCEEEECC-CCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSC
T ss_pred CCCCeEEcCC-CCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCC
Confidence 3577777777 5788999999999999999999999999977654321 122211 1113468999999
Q ss_pred CCCCCeeEEEEEEcCCcee
Q psy16859 144 TDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 144 ~~~d~g~y~C~~~n~~g~~ 162 (168)
..+|+|.|+|.|.|..|..
T Consensus 98 ~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 98 VEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp CGGGCEEEEEEEECCTTSS
T ss_pred CcccCEEEEEEEEecCCcc
Confidence 9999999999999999875
No 327
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.54 E-value=5.9e-14 Score=79.14 Aligned_cols=66 Identities=32% Similarity=0.561 Sum_probs=55.5
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEe
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVIN 68 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 68 (168)
+|.|.+.|++++..+. ...++.+..+ +...+|.|.+++.+|+|.|+|.+.|..|.....+.|.|..
T Consensus 40 ~p~p~i~W~~~~~~~~-~~~~~~~~~~-~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 105 (107)
T 3irg_B 40 EPPPVVVWEKGGQQLA-ASERLSFPAD-GAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp ESCCEEEEEETTEECC-CCSSEECCEE-TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCCCEEEEEECCeECC-CCCcEEEEeC-CCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEEEEEc
Confidence 4789999999999884 4557766655 6667899999999999999999999999888888888853
No 328
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.54 E-value=4.6e-13 Score=91.10 Aligned_cols=129 Identities=18% Similarity=0.201 Sum_probs=82.7
Q ss_pred CEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCC-eEEEEEEEcc-C
Q psy16859 30 NLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGE-DISFSFRLAG-S 107 (168)
Q Consensus 30 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~l~C~~~~-~ 107 (168)
+..+|+|.+++.+|+|.|.|.+.+..+.....+.|.|.. +|.+...+.....+..|+ .++|.|.+.+ .
T Consensus 252 g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~----------pP~V~v~p~~~~~~~~G~~~vtL~C~a~Gfy 321 (401)
T 3f8u_B 252 GNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYK----------PPKVSLMPATLARAAPGEAPPELLCLVSHFY 321 (401)
T ss_dssp EEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEB----------CCEEEEESSSCCCCCTTCCCCCEEEEEEEEB
T ss_pred CcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeecc----------CCeEeeccCcceeecCCCccEEEEEEecCCc
Confidence 467999999999999999999998877766677777743 444444443222234676 7999999988 4
Q ss_pred CC--CeEEEe-eCCE---eccCCC----CcEEEecCC----EEEEEEccCCCCC-CeeEEEEEEcCC---ceeeEEEEC
Q psy16859 108 PK--PKVTWM-KGIK---DITTSS----RTMTETVND----YVRLTLKRATDDE-NGTYFIVARNIY---GSDRAFVTV 168 (168)
Q Consensus 108 p~--~~~~W~-~~~~---~~~~~~----~~~~~~~~~----~~~l~i~~~~~~d-~g~y~C~~~n~~---g~~~~~~~v 168 (168)
|. +.+.|. +++. .+.... ......... .+.|.+.....++ .+.|+|.+.|.. |..+..++|
T Consensus 322 P~~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~sL~~g~rs~sVtL 400 (401)
T 3f8u_B 322 PSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPSLPASGRSAEVTL 400 (401)
T ss_dssp SSTTCEEEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTTSCTTCEEEEEEC
T ss_pred CCCCcEEEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCCCCCCcceEEEEe
Confidence 55 689995 7651 111110 000111111 1345555544334 459999999986 677776664
No 329
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=2.2e-14 Score=82.07 Aligned_cols=80 Identities=16% Similarity=0.262 Sum_probs=63.3
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEE-ecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTE-TVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
++.+...+ ..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+....++... .......|.|.++..+|+|.|+|.+.+
T Consensus 13 p~~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~g~ 91 (115)
T 2cr6_A 13 RVHIIEDL-EDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEAGD 91 (115)
T ss_dssp CCEEEECC-CEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEETT
T ss_pred CCeEeccC-ccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEECC
Confidence 44555555 6788999999999999999999999999999888776655443 223445799999999999999999544
Q ss_pred CC
Q psy16859 158 IY 159 (168)
Q Consensus 158 ~~ 159 (168)
..
T Consensus 92 ~~ 93 (115)
T 2cr6_A 92 QR 93 (115)
T ss_dssp EE
T ss_pred ee
Confidence 33
No 330
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.54 E-value=1.5e-13 Score=85.29 Aligned_cols=87 Identities=23% Similarity=0.360 Sum_probs=70.6
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCC--CcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSS--RTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... +...........|.|.++...|+|.|+|.+.
T Consensus 5 ~P~~~~~~-~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 5 APTFTQPL-QSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCeEEccC-CceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 45566555 56789999999999999999999999999998776543 4444445556789999999999999999999
Q ss_pred cCCceeeEEE
Q psy16859 157 NIYGSDRAFV 166 (168)
Q Consensus 157 n~~g~~~~~~ 166 (168)
|..|.....+
T Consensus 84 n~~~~~~~~~ 93 (194)
T 2a38_A 84 NGSGQATSTA 93 (194)
T ss_dssp ETTEEEEEEE
T ss_pred cCCceEeEEE
Confidence 9988776543
No 331
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.54 E-value=4.2e-13 Score=84.55 Aligned_cols=84 Identities=25% Similarity=0.390 Sum_probs=68.4
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEecc-CCCCcEEEe-cCCEEEEEEccCCC-CCCeeEEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDIT-TSSRTMTET-VNDYVRLTLKRATD-DENGTYFI 153 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~-~~~~~~~~~-~~~~~~l~i~~~~~-~d~g~y~C 153 (168)
..||.+...| ..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+. ...++.... ......|.|.++.. +|+|.|+|
T Consensus 4 ~~pP~~~~~p-~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 82 (212)
T 2yd1_A 4 AHPPEIIRKP-QNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYEC 82 (212)
T ss_dssp -CCCEEEECC-CCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEE
T ss_pred CCCCEEEcCC-CceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEE
Confidence 3567777777 57789999999999999999999999999998886 334444333 23447899999999 99999999
Q ss_pred EEEcCCce
Q psy16859 154 VARNIYGS 161 (168)
Q Consensus 154 ~~~n~~g~ 161 (168)
.+.|..|.
T Consensus 83 ~~~n~~g~ 90 (212)
T 2yd1_A 83 VAENGVGD 90 (212)
T ss_dssp EEECSSSC
T ss_pred EEEeCCCC
Confidence 99999887
No 332
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=1e-13 Score=77.65 Aligned_cols=75 Identities=21% Similarity=0.318 Sum_probs=62.7
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIV 154 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 154 (168)
.||.+...+ ..+.+.+|+.+.|.|.+ +.|.+.+.|++++..+....++..........|.|.++..+|+|.|+|.
T Consensus 7 ~pp~~~~~~-~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2dku_A 7 GANCFTEEL-TNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD 81 (103)
T ss_dssp CCCCCSSCC-CCEEEETTSEEEEEEEC-SSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE
T ss_pred CCCEeEecC-CcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE
Confidence 355555555 57889999999999994 7888999999999988877777766566667899999999999999998
No 333
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.53 E-value=5e-13 Score=83.14 Aligned_cols=88 Identities=23% Similarity=0.357 Sum_probs=70.5
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCC-CcEEE-ecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSS-RTMTE-TVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~-~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
.+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ++... .......|.|.++..+|+|.|+|.+
T Consensus 3 ~~P~~~~~~-~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (197)
T 2j8h_A 3 MAPHFKEEL-RNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (197)
T ss_dssp CCCEEEECC-CCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEE
T ss_pred CCCEEEEcC-CccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEE
Confidence 466677666 57889999999999999999999999999998876543 33332 2344568999999999999999999
Q ss_pred EcCCceeeEEE
Q psy16859 156 RNIYGSDRAFV 166 (168)
Q Consensus 156 ~n~~g~~~~~~ 166 (168)
.|..|.....+
T Consensus 82 ~n~~g~~~~~~ 92 (197)
T 2j8h_A 82 TNQGGSVSGTA 92 (197)
T ss_dssp EETTEEEEEEE
T ss_pred EECCCceeEEE
Confidence 99988766544
No 334
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1e-13 Score=77.56 Aligned_cols=75 Identities=28% Similarity=0.337 Sum_probs=62.5
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCceee
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 163 (168)
..+.+..|+.+.|.|.+. .|.+.+.|++++..+....++..........|.|.++..+|+|.|+|.+.|......
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~~ 93 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGGQQLSFR 93 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEETTEECCEE
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcCCCcEEEE
Confidence 345788999999999998 788999999999998877777666666667899999999999999999977544433
No 335
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.52 E-value=1.2e-13 Score=75.95 Aligned_cols=60 Identities=27% Similarity=0.388 Sum_probs=49.1
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
|.|.|.|+|||.+|. ...++.+..+ +...+|.|.+++.+|+|.|+|.+.|. ..++.|.|.
T Consensus 32 ~~~~v~W~k~g~~i~-~~~~~~i~~~-g~~~~L~I~~v~~~D~G~Y~C~a~n~----~~sa~L~V~ 91 (93)
T 1waa_A 32 PDVHGQWKLKGQPLA-ASPDCEIIED-GKKHILILHNCQLGMTGEVSFQAANT----KSAANLKVK 91 (93)
T ss_dssp SSCCCEEEETTEECC-CBTTEEEEEE-TTEEEEEECSCCGGGCEEEEEEETTE----EEEEEEEEE
T ss_pred CCCeEEEEECCEECc-CCCCEEEEEE-CCEEEEEECCCChhhCEEEEEEECCC----cEEEEEEEE
Confidence 568899999999994 4568887766 66789999999999999999999874 356677774
No 336
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.52 E-value=3.3e-13 Score=96.67 Aligned_cols=90 Identities=28% Similarity=0.490 Sum_probs=79.4
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
..|.+...+ ....+..|+.+.+.|.+.|.|.|.+.|++++..+..+.++.........+|.|.++..+|+|.|+|.|.|
T Consensus 481 ~~P~~~~~~-~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N 559 (573)
T 3uto_A 481 AQPRFIVKP-YGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKN 559 (573)
T ss_dssp GSCEEEECC-CCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred cCCccccCC-CCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEe
Confidence 345555555 5678899999999999999999999999999999988888888888888999999999999999999999
Q ss_pred CCceeeEEEEC
Q psy16859 158 IYGSDRAFVTV 168 (168)
Q Consensus 158 ~~g~~~~~~~v 168 (168)
..|..++.+.|
T Consensus 560 ~~G~~~~~v~l 570 (573)
T 3uto_A 560 SYGTKEEIVFL 570 (573)
T ss_dssp TTEEEEEEEEE
T ss_pred CCCcEEEEEEE
Confidence 99999977653
No 337
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.51 E-value=2.5e-13 Score=76.57 Aligned_cols=83 Identities=8% Similarity=0.128 Sum_probs=61.5
Q ss_pred EEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCE-ecc-------CCCCcEEE-ecCCEEEEEEccCCCCCCeeEE
Q psy16859 82 FLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIK-DIT-------TSSRTMTE-TVNDYVRLTLKRATDDENGTYF 152 (168)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~-~~~-------~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~ 152 (168)
+...+ ..+.+.+|+.+.|.|.+.+.|.+.+.|++++. .+. ...++... ......+|.|.+++.+|+|.|+
T Consensus 9 ~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (108)
T 3m45_A 9 QFPLT-QNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYT 87 (108)
T ss_dssp CCEEC-CCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEE
T ss_pred ccccC-CeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEE
Confidence 33444 46889999999999999999989999998664 111 12233332 2224578999999999999999
Q ss_pred EEEEcCCceeeEEE
Q psy16859 153 IVARNIYGSDRAFV 166 (168)
Q Consensus 153 C~~~n~~g~~~~~~ 166 (168)
|.+.| .|.....+
T Consensus 88 C~~~n-~~~~~~~~ 100 (108)
T 3m45_A 88 CSLFT-MPVKTSKA 100 (108)
T ss_dssp EEECS-SSCEEEEE
T ss_pred EEEEc-CCCcEEEE
Confidence 99999 77666544
No 338
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.51 E-value=4e-14 Score=77.45 Aligned_cols=51 Identities=16% Similarity=0.379 Sum_probs=44.2
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcc
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNE 54 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 54 (168)
|.|.|.|+|||++|. ...++.+..+ ++..+|.|.+++.+|+|.|+|.+.|.
T Consensus 33 p~~~v~W~k~g~~i~-~~~~~~i~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 33 EDAPVRWYKDGQEVE-ESDFVVLENE-GPHRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp TTSCCEEEETTSCCC-CCSSCEEEEE-TTEEEEEESSCCGGGCSEEEEECSSC
T ss_pred CCcEEEEEECCEEee-eeeeeeEEec-CCeEEEEeCCCChhhcEEEEEEEcce
Confidence 788999999999994 5568887777 77789999999999999999998654
No 339
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.51 E-value=2.9e-13 Score=81.30 Aligned_cols=68 Identities=29% Similarity=0.557 Sum_probs=57.0
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
+|.|.+.|++++..+. ...++.+.....+..+|.|.+++.+|+|.|+|.+.|..|.....+.|.|..+
T Consensus 68 ~P~p~v~W~k~g~~~~-~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 135 (154)
T 1fhg_A 68 YPDPEVMWFKDDNPVK-ESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVETM 135 (154)
T ss_dssp ESCCEEEEEETTEECC-CSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred ecCCEEEEEECCEECC-CCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEEEEeCc
Confidence 4889999999999984 4557776654355679999999999999999999999999888888888643
No 340
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.50 E-value=6.6e-13 Score=83.69 Aligned_cols=88 Identities=24% Similarity=0.305 Sum_probs=68.9
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEe-cCCEEEEEEccC-CCCCCeeEEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTET-VNDYVRLTLKRA-TDDENGTYFIVA 155 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~-~~~d~g~y~C~~ 155 (168)
.||.+...| ....+.+|+.+.|.|.+.|.|.+.+.|++++..+.......... ......|.|.++ ..+|+|.|+|.+
T Consensus 5 ~~P~~~~~p-~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 5 TPPRFTRTP-VDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp EEEEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCeEEeCc-ceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 456666666 56788999999999999999999999999998876543322222 224568999999 599999999999
Q ss_pred EcCCceeeEEE
Q psy16859 156 RNIYGSDRAFV 166 (168)
Q Consensus 156 ~n~~g~~~~~~ 166 (168)
.|..|.....+
T Consensus 84 ~n~~g~~~~~~ 94 (212)
T 2yd6_A 84 SNNVGEISVST 94 (212)
T ss_dssp EETTEEEEEEE
T ss_pred EcCCCcEEEEE
Confidence 99998866444
No 341
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.50 E-value=1.5e-13 Score=78.92 Aligned_cols=67 Identities=19% Similarity=0.240 Sum_probs=52.5
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecC---CCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEe
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDS---NNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVIN 68 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 68 (168)
+|.|++.|+|++..+.. ..+....... ....+|.|.+++.+|+|.|+|.+.|..|.....+.|.|..
T Consensus 32 ~P~p~i~W~k~g~~l~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 101 (118)
T 1wwc_A 32 NPPPTLHWLHNGQPLRE-SKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLK 101 (118)
T ss_dssp SSCCEEEEEETTEECCC-SSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECCSC
T ss_pred eCCCeEEEEECCEECCC-CCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEEEcc
Confidence 58999999999999843 3344433220 1345899999999999999999999999988888887743
No 342
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.49 E-value=3.5e-13 Score=74.91 Aligned_cols=66 Identities=27% Similarity=0.505 Sum_probs=55.5
Q ss_pred CCCceEEEEECCEecCC-CCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPK-SSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
+|.|.+.|++++..+.. ...++.+... ....+|.|.+++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 32 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 32 EPTPEVTWSCGGRKIHSQEQGRFHIENT-DDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp ESCCEEEEEETTEECCTTGGGTEEEEEC-SSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCCCceEEEECCEEeecCCCCEEEEEec-CCEEEEEEeecCcccCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 48899999999998853 3457777766 666799999999999999999999999988778888773
No 343
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.1e-14 Score=79.51 Aligned_cols=73 Identities=22% Similarity=0.364 Sum_probs=59.6
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
++.+...| ....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.+.|.
T Consensus 10 ~~~i~~~p-~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~n~ 79 (96)
T 2ens_A 10 EVQLVVEP-EGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPP---------SPVLILPEIGPQDQGTYSCVATHS 79 (96)
T ss_dssp SCCCEEES-TTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSCC---------CSEEEEESCCTTTCEEEECEECCS
T ss_pred CCEEEECC-CCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCCC---------CCEEEECCCCcccCEEEEEEEEeC
Confidence 44555556 45678999999999999999999999999888765432 237999999999999999999997
Q ss_pred Cce
Q psy16859 159 YGS 161 (168)
Q Consensus 159 ~g~ 161 (168)
.|.
T Consensus 80 ~~~ 82 (96)
T 2ens_A 80 SHG 82 (96)
T ss_dssp SCC
T ss_pred CCC
Confidence 553
No 344
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.49 E-value=2.6e-13 Score=74.60 Aligned_cols=62 Identities=21% Similarity=0.393 Sum_probs=49.9
Q ss_pred CCCceEEEEECC--EecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEE
Q psy16859 1 YVKPEVIWLRGN--TPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDV 66 (168)
Q Consensus 1 ~p~p~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 66 (168)
+|.|.+.|++++ ..+.. . ...... .....|.|.+++.+|+|.|+|.+.|..|.....+.|.|
T Consensus 29 ~P~p~i~W~k~~~~~~~~~-~--~~~~~~-~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 29 APDPTATWTVGDSGAALAP-E--LLVDAK-SSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEVIV 92 (93)
T ss_dssp CSSCEEEEECSTTTCBCST-T--SEEEEE-TTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCEEEEEECCCCcccCC-c--EEEEec-CCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEEEEEE
Confidence 589999999999 87732 2 222333 45578999999999999999999999998877777776
No 345
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=1.6e-13 Score=78.80 Aligned_cols=65 Identities=22% Similarity=0.405 Sum_probs=54.3
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
+|.|.+.|++++..+.....++..... + +|.|.+++.+|+|.|+|.+.|..|.....+.|.|...
T Consensus 35 ~p~p~i~W~k~g~~~~~~~~~~~~~~~--~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 99 (118)
T 2eo9_A 35 SPVPTILWRKDGVLVSTQDSRIKQLEN--G--VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEF 99 (118)
T ss_dssp SSCCEEEEEESSSBCCTTSTTEEEEET--T--EEEEESCCGGGCCCEEEEEECSSCEEEEECCEEEECC
T ss_pred cCCCEEEEEECCEECcCCCCeEEEccC--C--EEEEccCCcCCCEEEEEEEEcCCCcEEEEEEEEEEeC
Confidence 588999999999988655667765544 2 7999999999999999999999998888888888643
No 346
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.48 E-value=6.3e-13 Score=76.97 Aligned_cols=79 Identities=11% Similarity=0.149 Sum_probs=60.3
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCEecc--------CCCCcEEE-ecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDIT--------TSSRTMTE-TVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~--------~~~~~~~~-~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
..+.+.+|++++|.|.+.+.|.+.+.|++.+..+. ...++... ......+|.|.+++.+|+|.|+|.+.|.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 88 (124)
T 3rbg_A 9 ETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSD 88 (124)
T ss_dssp EEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESS
T ss_pred ccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcC
Confidence 56778899999999999999999999997543211 22334332 2334578999999999999999999999
Q ss_pred CceeeEEEE
Q psy16859 159 YGSDRAFVT 167 (168)
Q Consensus 159 ~g~~~~~~~ 167 (168)
|.....+.
T Consensus 89 -g~~~~~~~ 96 (124)
T 3rbg_A 89 -SVSTKEVK 96 (124)
T ss_dssp -SEEEEEEE
T ss_pred -CCCcEEEE
Confidence 87765543
No 347
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.48 E-value=2.4e-12 Score=82.18 Aligned_cols=143 Identities=14% Similarity=0.161 Sum_probs=83.2
Q ss_pred ceEEEEECC--E---ec--------CCCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEccc------ce--eeEE
Q psy16859 4 PEVIWLRGN--T---PL--------PKSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEY------GY--TETF 61 (168)
Q Consensus 4 p~v~W~~~~--~---~~--------~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~------~~--~~~~ 61 (168)
+.+.||+.. . .+ .....|+.+..+ ..+..+|.|.+++.+|+|.|.|.+.+.. +. ....
T Consensus 33 ~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~g 112 (229)
T 1hxm_A 33 YYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERDEGSYYCACDTLGMGGEYTDKLIFGKG 112 (229)
T ss_dssp SEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECCCCSSSCCCCCEEBCC
T ss_pred ceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhHCeEEEEEEecCCCcccccchhhcCcc
Confidence 579999842 1 11 112467876643 3567899999999999999999998753 11 1123
Q ss_pred EEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CCC-eEEEeeCCEeccCCCCcEEEecCCEEEEE
Q psy16859 62 ARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PKP-KVTWMKGIKDITTSSRTMTETVNDYVRLT 139 (168)
Q Consensus 62 ~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~ 139 (168)
..|.|..... ...+|.+.. ..+ .+.|.|.+.+. |.+ .+.|.++ ..+............. .+.
T Consensus 113 t~L~V~~~~~----~~~~P~v~~--------~~~-~~~L~C~~~g~~P~~i~v~W~~~-~~~~~~~~~~~~~~dg--~y~ 176 (229)
T 1hxm_A 113 TRVTVEPRSQ----PHTKPSVFV--------MKN-GTNVACLVKEFYPKDIRINLVSS-KKITEFDPAIVISPSG--KYN 176 (229)
T ss_dssp EEEEEECCSC----CCBCCEEEE--------EEE-TTEEEEEEESCBSSCCEEEEECS-SEEEECCCEEEECTTS--SEE
T ss_pred EEEEEeccCC----CCcCCcEEE--------cCC-CCeEEEEEEEEeCCCEEEEEecC-CEEecCccceEECCCC--cEE
Confidence 4677753211 011222221 111 24899999874 544 8999998 5554322111111112 222
Q ss_pred Ecc-CCCCCCeeEEEEEEcCCcee
Q psy16859 140 LKR-ATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 140 i~~-~~~~d~g~y~C~~~n~~g~~ 162 (168)
+.. ....+.|.|+|.+.|..+..
T Consensus 177 ~~~~~~~~~~~~ytC~V~h~~~~~ 200 (229)
T 1hxm_A 177 AVKLGKYEDSNSVTCSVQHDNKTV 200 (229)
T ss_dssp EEEEEEETTTTTCEEEEEETTEEE
T ss_pred EEECcccCCCCcEEEEEEeCCCCc
Confidence 222 23467899999999987544
No 348
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.48 E-value=6.9e-14 Score=78.83 Aligned_cols=64 Identities=28% Similarity=0.402 Sum_probs=54.9
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDV 66 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 66 (168)
+|.|.+.|++++..+. ...++.+... ....+|.|.+++.+|+|.|+|.+.|..|.....+.|.|
T Consensus 41 ~p~p~v~W~k~g~~l~-~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 104 (106)
T 1nct_A 41 EPVPTVTWLRKGQVLS-TSARHQVTTT-KYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTI 104 (106)
T ss_dssp SSCCBCCBCSSSSCCT-TCSSEEEEEC-SSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEEEE
T ss_pred cCCCEEEEEECCEECC-CCCCEEEEEC-CCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEEEE
Confidence 5889999999999884 4567777765 56679999999999999999999999998888888877
No 349
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=9e-14 Score=78.80 Aligned_cols=69 Identities=28% Similarity=0.463 Sum_probs=54.7
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEecc
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVS 70 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 70 (168)
+|.|.+.|++++..+.... +........+..+|.|.+++.+|+|.|+|.+.|..|.....+.|.|..++
T Consensus 36 ~p~p~v~W~~~g~~~~~~~-~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p 104 (110)
T 2dm3_A 36 LPTPDLSWQLDGKPVRPDS-AHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKE 104 (110)
T ss_dssp SSCCEEECBBSSSBCCCCS-SEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCEEEEECCC
T ss_pred cCCCEEEEEECCEECCCCC-ceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEEEEEeCCC
Confidence 5889999999999885433 33333332556789999999999999999999999988888888886543
No 350
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=1.6e-13 Score=76.46 Aligned_cols=63 Identities=29% Similarity=0.474 Sum_probs=51.8
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
+|.|.+.|++++..+.....++..... + +|.|.+++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 35 ~p~p~v~W~~~~~~~~~~~~~~~~~~~--~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (100)
T 2edj_A 35 DPLPVISWLKEGFTFPGRDPRATIQEQ--G--TLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVT 97 (100)
T ss_dssp SSCCEEEEEESSSEESSSCSSCEECTT--C--CEEEESCCTTTCCEEEEEEECSSCCCBCCEEEEEE
T ss_pred cCCCEEEEEECCEECCCCCCCEEEcCC--C--EEEEccCCcccCEEEEEEEEcCCCCEEEEEEEEEe
Confidence 588999999999888544555554333 2 69999999999999999999999988888888885
No 351
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=5.5e-14 Score=81.04 Aligned_cols=68 Identities=19% Similarity=0.357 Sum_probs=51.2
Q ss_pred CCCceEEEEECCEe-cC-CCCCceEEEec---C--CCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEe
Q psy16859 1 YVKPEVIWLRGNTP-LP-KSSPRFKYIED---S--NNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVIN 68 (168)
Q Consensus 1 ~p~p~v~W~~~~~~-~~-~~~~~~~~~~~---~--~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 68 (168)
+|.|+|.|||+... +. ....++.+... . ...+.|+|.+++.+|+|.|+|++.|..+.....+.|.|..
T Consensus 37 ~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 37 LRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp SSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred CCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 48999999997521 11 11345554321 0 1247899999999999999999999999988899999976
No 352
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=3.2e-13 Score=76.99 Aligned_cols=67 Identities=25% Similarity=0.352 Sum_probs=50.6
Q ss_pred CCCceEEEEECCE-ecCC-CCCceEEEecCC-----CEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 1 YVKPEVIWLRGNT-PLPK-SSPRFKYIEDSN-----NLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 1 ~p~p~v~W~~~~~-~~~~-~~~~~~~~~~~~-----~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
+|.|+|.|||+.. .+.. ...++.+..... ..++|+|.+++.+|+|.|.|++.|..|.....+.|.|.
T Consensus 42 ~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevsn~~g~~s~~~~L~V~ 115 (118)
T 2edn_A 42 PDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDVE 115 (118)
T ss_dssp SSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEECSSCEEEEEECCEEE
T ss_pred CCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEEEcCCcEEEEEEEEEE
Confidence 4899999999752 2321 134555432211 25789999999999999999999999998889999985
No 353
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.46 E-value=1.9e-12 Score=79.56 Aligned_cols=114 Identities=15% Similarity=0.181 Sum_probs=77.8
Q ss_pred EEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCCC
Q psy16859 32 HTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPKP 110 (168)
Q Consensus 32 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~ 110 (168)
..|.|.+++. | |.|.|.+..........+.|+|... |..+.+.+. ...+.+|+.++|.|.+.+ .|..
T Consensus 50 ~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~~~l~V~~~---------P~~v~i~~~-~~~~~~G~~~tL~C~v~g~~P~~ 117 (185)
T 1iam_A 50 KVYELSNVQE-D-SQPMCYSNCPDGQSTAKTFLTVYWT---------PERVELAPL-PSWQPVGKQLTLRCQVEGGAPRA 117 (185)
T ss_dssp EEEEEEEECS-C-BCCEEEEECSSCEEEEECEEEEEBC---------CSEEEECCC-CSEECTTSEEEEEEEEECCBCGG
T ss_pred eEEEEEecCc-C-CEEEEEEECCCCceEEEEEEEEeCC---------CCCCEEccC-CccccCCCcEEEEEEcCCccCCC
Confidence 4689999984 4 9999998655444555777788543 444555553 345889999999999998 4543
Q ss_pred --eEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 111 --KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 111 --~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
.+.|++++..+..... .......++.+.....+|...|+|.|.|..+
T Consensus 118 ~l~i~w~kg~~~l~~~~~---~~~~~~~tl~~~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 118 QLTVVLLRGEKELKREPA---VGEPAEVTTTVLVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp GEEEEEEETTEEEEEEEC---CTTTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred CcEEEEEeCCEEcccccC---CCccccEEEEEeceeccCCCeEEEEEEecCc
Confidence 4899999987754220 0011123566665555555699999999876
No 354
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.45 E-value=1.2e-12 Score=80.94 Aligned_cols=86 Identities=23% Similarity=0.408 Sum_probs=67.3
Q ss_pred CCeEEecCC-cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 79 PAMFLTRPD-TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 79 ~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
||.+...+. ..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+....++..... ...|.|.++...|+|.|+|.+.|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~~ 79 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGS--NTELTVRNIINSDGGPYVCRATN 79 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETT--TTEEEECSCCGGGCEEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCC--eeEEEEecCChhcCcEEEEEEEc
Confidence 444444332 356788999999999999999999999999998877665544322 24799999999999999999999
Q ss_pred CCceeeEEE
Q psy16859 158 IYGSDRAFV 166 (168)
Q Consensus 158 ~~g~~~~~~ 166 (168)
..|.....+
T Consensus 80 ~~~~~~~~~ 88 (192)
T 2va4_A 80 KAGEDEKQA 88 (192)
T ss_dssp TTEEEEEEE
T ss_pred cccccceEE
Confidence 988765443
No 355
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.45 E-value=1.6e-12 Score=80.76 Aligned_cols=83 Identities=16% Similarity=0.189 Sum_probs=65.6
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEc-cCCCCeEEEeeCCEeccCCCC--cEEEecCC-------EEEEEEccCCCCCC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLA-GSPKPKVTWMKGIKDITTSSR--TMTETVND-------YVRLTLKRATDDEN 148 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~~~~~~~~~~--~~~~~~~~-------~~~l~i~~~~~~d~ 148 (168)
++.+...| ....+.+|+.+.|.|.+. +.|.+.+.|++++..+..... .......+ ...|.|.++...|+
T Consensus 2 ~~~~~~~p-~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 2 ESPFVGNP-GNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp CCSEEECC-CCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCeeccCh-hheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 44556666 577899999999999999 899999999999998876532 22222221 46899999999999
Q ss_pred eeEEEEEEcCCcee
Q psy16859 149 GTYFIVARNIYGSD 162 (168)
Q Consensus 149 g~y~C~~~n~~g~~ 162 (168)
|.|+|.+.|..|..
T Consensus 81 G~Y~C~~~~~~~~~ 94 (195)
T 2c5d_C 81 GQYQCLVFLGHQTF 94 (195)
T ss_dssp EEEEEEEEETTEEE
T ss_pred cEEEEEEEeCCCce
Confidence 99999999987754
No 356
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.44 E-value=7e-13 Score=73.15 Aligned_cols=58 Identities=26% Similarity=0.469 Sum_probs=47.9
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEE
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDV 66 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 66 (168)
| |.+.|++++..+. ...++.+... .|.|.+++.+|+|.|+|.+.|..|.....+.|.|
T Consensus 37 p-p~i~W~k~g~~~~-~~~~~~~~~~-----~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 37 V-QSINWLRDGVQLV-ESNRTRITGE-----EVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp C-CEEEEEBTTBCCC-CCSSEEECSS-----EEEESSCCGGGSEEEEEEEEETTEEEEEEEEEEE
T ss_pred C-CceEEEECCEecC-CCCCEEEeCC-----EEEECCCChHHCEEEEEEeccCCCcEEEEEEEEE
Confidence 5 7999999999884 4456655433 8999999999999999999999888777777766
No 357
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.43 E-value=8.4e-13 Score=73.51 Aligned_cols=62 Identities=15% Similarity=0.265 Sum_probs=50.5
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEe
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVIN 68 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 68 (168)
.|.|.+.||+++..+. ...++.+... +....|.|.+++.+|+|.|+|.+ +.....+.|.|..
T Consensus 34 ~p~~~v~W~k~g~~i~-~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a----g~~~~~~~l~V~~ 95 (100)
T 2yuv_A 34 DPKLEVKWYKNGQEIR-PSTKYIFEHK-GCQRILFINNCQMTDDSEYYVTA----GDEKCSTELFVRS 95 (100)
T ss_dssp CTTSCEEEEESSCBCC-CBTTEEEEEE-TTEEEEEEEEECTTTCCEEEEEE----TTEEEEEEEEECC
T ss_pred CCCceEEEEECCEECC-CCCCEEEEec-CCEEEEEEcCCCcCcCEEEEEEE----CCceEEEEEEEec
Confidence 3789999999999884 4557877766 66678999999999999999999 5556677888843
No 358
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.43 E-value=1.3e-12 Score=77.74 Aligned_cols=77 Identities=9% Similarity=0.196 Sum_probs=58.6
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEee---------CCEeccCCCCcEE-EecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMK---------GIKDITTSSRTMT-ETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~---------~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
..+.+..|++++|.|.+.+.+.+.+.|++ ++..+. ..++.. .......+|.|.+++.+|+|.|+|.+.|
T Consensus 46 ~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~-~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n 124 (145)
T 1z9m_A 46 SDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALR-DNRIQLVTSTPHELSISISNVALADEGEYTCSIFT 124 (145)
T ss_dssp CCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSC-CTTEEEEEECSSEEEEEECSCCGGGCEEEEEEECS
T ss_pred ceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecc-cCCEEEecCCCCeEEEEECCCChhhCEEEEEEEEc
Confidence 56789999999999999998888999994 333322 233332 2233457899999999999999999999
Q ss_pred CCceeeEEE
Q psy16859 158 IYGSDRAFV 166 (168)
Q Consensus 158 ~~g~~~~~~ 166 (168)
. |.....+
T Consensus 125 ~-~~~~~~~ 132 (145)
T 1z9m_A 125 M-PVRTAKS 132 (145)
T ss_dssp S-SCEEEEE
T ss_pred C-CCceEEE
Confidence 8 7666544
No 359
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.43 E-value=7.6e-13 Score=74.66 Aligned_cols=65 Identities=22% Similarity=0.425 Sum_probs=46.3
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
+|.|.+.|++++..+. ...++..... . .+|.|.+++.+|+|.|+|.+.|..|.....+.|.|...
T Consensus 37 ~p~p~i~W~~~~~~~~-~~~~~~~~~~-~--~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 101 (108)
T 3kvq_A 37 NPPPQIMWFKDNETLV-EDSGIVLKDG-N--RNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGA 101 (108)
T ss_dssp ---CCEEEEESSSBCC-CBTTEEEETT-T--TEEEECSCCGGGCEEEEEEEC----CEEEEEEEEEEC-
T ss_pred cCCCeEEEEECCeEcc-cCCCeEEeCC-C--cEEEEeecCcccCEEEEEEEEeCCCceEEEEEEEEeCC
Confidence 4789999999998884 3445554433 3 37999999999999999999999999888888888643
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.42 E-value=9.7e-13 Score=89.45 Aligned_cols=85 Identities=18% Similarity=0.208 Sum_probs=49.9
Q ss_pred CCceEEEEECCEecCC---CCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCC
Q psy16859 2 VKPEVIWLRGNTPLPK---SSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEK 78 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~---~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~ 78 (168)
|+|.|.|++++..+.. ...++.+ . ++ +|.|.+++.+|+|.|+|.+.|..|.....+.|.|..
T Consensus 273 p~p~i~W~~~~~~~~~~~~~~~r~~~--~-~~--~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~---------- 337 (361)
T 2xot_A 273 QGMTKVWVSPSNEQVLSQGSNGSVSV--R-NG--DLFFKKVQVEDGGVYTCYAMGETFNETLSVELKVYN---------- 337 (361)
T ss_dssp TTCEEEEECTTSCBCCSCCSSSSEEE--E-TT--EEEESSCCTTSCEEEEEEEECSSCEEEEEEEEEEES----------
T ss_pred CCCeEEEEeCCCeeEeecccCCceEe--e-cC--eEEEeecCcccCEEEEEEEecCCCccEEEEEEEEEe----------
Confidence 7899999997765422 2236666 2 33 799999999999999999999988888888888831
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEE
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVT 113 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~ 113 (168)
. ...|..+.|.|.+.|.|.|.+.
T Consensus 338 ~------------~~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 338 F------------TLHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp S------------CCC-------------------
T ss_pred e------------eccCCceEEEEEeCCCCCCccc
Confidence 1 1467789999999999988753
No 361
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.42 E-value=1.9e-12 Score=71.35 Aligned_cols=61 Identities=20% Similarity=0.353 Sum_probs=50.5
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEe
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVIN 68 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 68 (168)
+.|.+.|++++..+. ...++..... +|.|.+++.+|+|.|+|.+.|..|.....+.|.|..
T Consensus 27 ~~p~v~W~k~g~~~~-~~~~~~~~~~-----~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 87 (95)
T 4hwu_A 27 DAAVISWTKDGVHLG-PNNRTVLIGE-----YLQIKGATPRDSGLYACTAARTVDSETWIFMVNVTD 87 (95)
T ss_dssp TTCEEEEEETTEEEC-CCSSEEEETT-----EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECC
T ss_pred CCCEEEEEECCEECC-CCceEEEeCC-----EEEECcCCcccCEEEEEEEccCCCcEEEEEEEEEeC
Confidence 358999999999884 4456665543 799999999999999999999999888888888843
No 362
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.42 E-value=6.6e-12 Score=77.55 Aligned_cols=74 Identities=22% Similarity=0.397 Sum_probs=63.7
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEee-CCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCcee
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMK-GIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSD 162 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~ 162 (168)
....+.+|+.+.|.|.+.+.|. .+.|++ ++..+....+...........|.|.++..+|+|.|+|.+.|..|..
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~ 84 (189)
T 2v44_A 10 SKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQT 84 (189)
T ss_dssp SEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCE
T ss_pred CceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCc
Confidence 5678899999999999998877 999999 7777776667666666666799999999999999999999998865
No 363
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=8.2e-13 Score=73.37 Aligned_cols=61 Identities=25% Similarity=0.456 Sum_probs=48.2
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDV 66 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 66 (168)
+|.|.+.|++++..+.... . .. . .+..+|.|.+++.+|+|.|+|.+.|..|.....+.|.|
T Consensus 38 ~p~p~v~W~~~g~~~~~~~-~-~~--~-~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 38 TPVPRITWLLNGQPIQYAR-S-TC--E-AGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTV 98 (99)
T ss_dssp ESCCCCEEEESSSBCSSCC-C-EE--E-TTEEEEEECSCCTTCCBCEEEEEECSSCEEEEECCEEE
T ss_pred eCCCeEEEEECCEECcccc-e-Ee--e-CCeEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEE
Confidence 4889999999998884322 1 11 2 34568999999999999999999999998877777666
No 364
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=2e-12 Score=73.53 Aligned_cols=62 Identities=23% Similarity=0.461 Sum_probs=50.1
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEe
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVIN 68 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 68 (168)
.|.|.+.|+|++..+. ...++.+... +...+|.|.+++.+|+|.|+|.+.| ....+.|.|..
T Consensus 39 ~p~~~v~W~k~g~~~~-~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~V~~ 100 (113)
T 2cpc_A 39 RPWAEVRWTKDGEEVV-ESPALLLQKE-DTVRRLVLPAVQLEDSGEYLCEIDD----ESASFTVTVTE 100 (113)
T ss_dssp CTTCCCEEEETTEECC-CBTTBEEEEC-SSEEEEEESSCCTTTCEEEEEESSS----CEEEEEEEEEC
T ss_pred CCCCeEEEEECCEECc-cCCCEEEEEC-CCEEEEEECCCCcccCEEEEEEEec----CcEEEEEEEec
Confidence 4789999999999984 4557777666 5567899999999999999999988 34567778853
No 365
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.40 E-value=2.4e-12 Score=72.01 Aligned_cols=63 Identities=19% Similarity=0.379 Sum_probs=49.5
Q ss_pred CCceEEEEECCEecCCCCC-ceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 2 VKPEVIWLRGNTPLPKSSP-RFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
|.|.+.|+|++..+..... ++.+... +....|.|.+++.+|+|.|+|.+.| ....+.|.|...
T Consensus 34 ~~~~v~W~k~g~~l~~~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~~~l~V~~~ 97 (103)
T 1x44_A 34 DDANVKWFKNGEEIIPGPKSRYRIRVE-GKKHILIIEGATKADAAEYSVMTTG----GQSSAKLSVDLK 97 (103)
T ss_dssp SSCCCEEEETTEECCCSTTCSEEEEEE-TTEEEEEEEEECTTTCSEEEEEETT----EEEEEEEEEECC
T ss_pred CCCeEEEEECCEECCCCCceEEEEEEc-CCEEEEEECCCCcccCEEEEEEECC----CcEEEEEEEeCC
Confidence 5689999999999843322 6677766 6667899999999999999999987 355677777543
No 366
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.40 E-value=4.3e-13 Score=74.64 Aligned_cols=63 Identities=29% Similarity=0.565 Sum_probs=48.5
Q ss_pred CCCceEEEEECCEecCCCC--CceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSS--PRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDV 66 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 66 (168)
+|.|.+.|++++..+.... ..+..... . .+|.|.+++.+|+|.|+|.+.|..|.....+.|.|
T Consensus 35 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~-~--~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 35 NPMPTMRWLKNGKEFKQEHRIGGYKVRNQ-H--WSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99 (100)
T ss_dssp ESCCEEEEEETTEECCGGGSTTCCEEEGG-G--TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCEEEEEECCEEcccccccccEEEecC-e--EEEEEccCCcCCCEEEEEEEEeCCCEEEEEEEEEE
Confidence 4889999999999884321 12233322 2 37999999999999999999999998877777776
No 367
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=1.7e-12 Score=72.18 Aligned_cols=58 Identities=24% Similarity=0.457 Sum_probs=47.6
Q ss_pred ceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 4 PEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 4 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
|.+.|+|++..+. ...++.+... +|.|.+++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 32 p~i~W~k~g~~~~-~~~~~~~~~~-----~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 89 (99)
T 2cr3_A 32 QSINWLRDGVQLA-ESNRTRITGE-----EVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVS 89 (99)
T ss_dssp CEEEEEESSSBCC-CCSSEEECSS-----EEEETTCCTTTCEEEEEEEEETTEEEEEEEEECBC
T ss_pred CeEEEEECCEECC-CCCcEEEECC-----EEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEEe
Confidence 7999999998884 3446655433 89999999999999999999998888777777774
No 368
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.40 E-value=2.3e-12 Score=71.04 Aligned_cols=60 Identities=22% Similarity=0.408 Sum_probs=47.9
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDV 66 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 66 (168)
.|.|.+.|+|++..+. ...++.+... +...+|.|.+++.+|+|.|+|.+ +.....+.|.|
T Consensus 34 ~p~~~v~W~k~~~~l~-~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a----g~~~~~~~l~V 93 (95)
T 2k1m_A 34 RAGVKVRWQRGGSDIS-ASNKYGLATE-GTRHTLTVREVGPADQGSYAVIA----GSSKVKFDLKV 93 (95)
T ss_dssp SSSCCCEEECSSSEEC-SSTTCEEEEE-TTEEEEEESSCCTTCCSEEEEEE----TTEEEEEEEEE
T ss_pred CCCCeEEEEECCEECC-CCCcEEEEEc-CCEEEEEEcCCCcccCEEEEEEE----CCceEEEEEEE
Confidence 4788999999999884 4457777766 66678999999999999999999 34445566666
No 369
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.40 E-value=1e-12 Score=82.43 Aligned_cols=79 Identities=14% Similarity=0.115 Sum_probs=59.7
Q ss_pred ceEeecCCeEEEEEE---EccCCCCeEEEeeCCEeccC-----------------CCCcEEEecCCEEEEEEccCCCCCC
Q psy16859 89 MMSVALGEDISFSFR---LAGSPKPKVTWMKGIKDITT-----------------SSRTMTETVNDYVRLTLKRATDDEN 148 (168)
Q Consensus 89 ~~~~~~g~~~~l~C~---~~~~p~~~~~W~~~~~~~~~-----------------~~~~~~~~~~~~~~l~i~~~~~~d~ 148 (168)
.+++..|+.++|.|. +.+.|.+.+.|++++..... ..++..........|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 467889999999995 55789999999987632211 1122333344567899999999999
Q ss_pred eeEEEEEEcCCceeeEEEE
Q psy16859 149 GTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 149 g~y~C~~~n~~g~~~~~~~ 167 (168)
|.|+|.|.|..|.....+.
T Consensus 82 G~Y~C~a~n~~g~~~~~~~ 100 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEH 100 (203)
T ss_dssp EEEEEEEEETTEEEEEEEE
T ss_pred eEEEEEEEcCCCcEEEEEE
Confidence 9999999999998775543
No 370
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=99.40 E-value=1.9e-11 Score=87.47 Aligned_cols=147 Identities=10% Similarity=0.103 Sum_probs=86.2
Q ss_pred ceEEEEECCEecCCCCCceEEEec---CCCEEEEEEcCCCCCCCeEEEEEEEcccceee--EEEEEEEEeccCCCcccCC
Q psy16859 4 PEVIWLRGNTPLPKSSPRFKYIED---SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE--TFARVDVINVSSGAVKHEK 78 (168)
Q Consensus 4 p~v~W~~~~~~~~~~~~~~~~~~~---~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~l~v~~~~~~~~~~~~ 78 (168)
..|.|++++..+.....+...... ....+.|.|......|.+.|+|.+.+...... ..+.+.+.. ..
T Consensus 377 i~v~W~~~~~~~~~~~t~~~~~~~n~~~~~~s~L~i~~~~~~~~~~y~C~v~~~~~~~~~~~~~~~~~~~--------~~ 448 (551)
T 1ntl_A 377 VQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGR--------PK 448 (551)
T ss_pred eEEEEEECCccccccccCCceECCCCeEEEEEeeEcCHHHccCCceEEEEEecCCCCCCeEEEEecCCCC--------Cc
Confidence 689999998765321111111001 01124588887777888999999998755322 233333211 12
Q ss_pred CCeE-EecCCcceEeecCCeEEEEEEEcc-CCC-CeEEEeeCCEeccCCCCcEEEecC--C---EEEEEEccCCCCCCee
Q psy16859 79 PAMF-LTRPDTMMSVALGEDISFSFRLAG-SPK-PKVTWMKGIKDITTSSRTMTETVN--D---YVRLTLKRATDDENGT 150 (168)
Q Consensus 79 ~~~~-~~~~~~~~~~~~g~~~~l~C~~~~-~p~-~~~~W~~~~~~~~~~~~~~~~~~~--~---~~~l~i~~~~~~d~g~ 150 (168)
+|.+ ...+. .....+..++|.|.+.+ .|. ..+.|++++..+............ . .+.|.+....+.+.+.
T Consensus 449 ~P~V~~~~~~--~~~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~l~v~~~~~~~~~~ 526 (551)
T 1ntl_A 449 APQLYTIPPP--KEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNGSYFVYSKLNVQKSNWEAGNT 526 (551)
T ss_pred CCceEEeCCC--hhhccCCceEEEEEEEEeECCCCEEEEEECCEEccCceeccceeCCCCCEEEEEEEEEcHHHcCCCCe
Confidence 3333 33332 22446889999999998 453 479999999876532111111111 1 1346666666667889
Q ss_pred EEEEEEcCCc
Q psy16859 151 YFIVARNIYG 160 (168)
Q Consensus 151 y~C~~~n~~g 160 (168)
|+|.|.|..-
T Consensus 527 ytC~V~h~~l 536 (551)
T 1ntl_A 527 FTCSVLHEGL 536 (551)
T ss_pred EEEEEEECCC
Confidence 9999998754
No 371
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.39 E-value=3.2e-12 Score=78.52 Aligned_cols=79 Identities=15% Similarity=0.335 Sum_probs=62.6
Q ss_pred EEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCC--EEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 82 FLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVND--YVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
+...| ..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+....+........ ...|.|.++..+|+|.|+|.+.|..
T Consensus 5 ~~~~p-~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 83 (182)
T 1rhf_A 5 LMGAP-VKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGG 83 (182)
T ss_dssp --CCC-EEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCT
T ss_pred EEeCC-cceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCC
Confidence 33344 56788999999999999998999999999998887665444333322 3689999999999999999999987
Q ss_pred ce
Q psy16859 160 GS 161 (168)
Q Consensus 160 g~ 161 (168)
|.
T Consensus 84 ~~ 85 (182)
T 1rhf_A 84 ET 85 (182)
T ss_dssp TC
T ss_pred Cc
Confidence 64
No 372
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.39 E-value=1.2e-11 Score=76.44 Aligned_cols=84 Identities=21% Similarity=0.304 Sum_probs=63.6
Q ss_pred eEEecCCcceEeecCCeEEEEEEEccCC-CCeEEEee-CCEeccC-CCCcEEEe-cCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 81 MFLTRPDTMMSVALGEDISFSFRLAGSP-KPKVTWMK-GIKDITT-SSRTMTET-VNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~~~W~~-~~~~~~~-~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
.+...| ....+.+|+.+.|.|.+.+.+ .+.+.|++ ++..+.. ..++.... ......|.|.++..+|+|.|+|.+.
T Consensus 4 ~v~~~p-~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (191)
T 1epf_A 4 QVDIVP-SQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVT 82 (191)
T ss_dssp CEEEES-SSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEecC-CCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEE
Confidence 344455 467889999999999999876 78999999 8877663 33333322 2456789999999999999999999
Q ss_pred cCCc-eeeEE
Q psy16859 157 NIYG-SDRAF 165 (168)
Q Consensus 157 n~~g-~~~~~ 165 (168)
|..| .....
T Consensus 83 ~~~~~~~~~~ 92 (191)
T 1epf_A 83 AEDGTQSEAT 92 (191)
T ss_dssp ETTTEEEEEE
T ss_pred cCCCcceEEE
Confidence 9884 44433
No 373
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.39 E-value=4.9e-12 Score=79.59 Aligned_cols=71 Identities=14% Similarity=0.241 Sum_probs=59.9
Q ss_pred ceEeecCCeEEEEEEEcc-CCCCeEEEeeCCEeccCCCCcEEEecC--CEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 89 MMSVALGEDISFSFRLAG-SPKPKVTWMKGIKDITTSSRTMTETVN--DYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 89 ~~~~~~g~~~~l~C~~~~-~p~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
...+.+|+.+.|.|.+.+ .|.|.+.|++++..+....++.+.... ...+|.|.++..+|+|.|+|.|.|..
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng~ 84 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGK 84 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEETT
T ss_pred ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECCC
Confidence 467889999999999864 799999999999999877776655443 45679999999999999999999933
No 374
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.39 E-value=2.8e-13 Score=89.22 Aligned_cols=134 Identities=14% Similarity=0.172 Sum_probs=37.3
Q ss_pred eEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccce--------eeEEEEEEEEeccCCCccc
Q psy16859 5 EVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGY--------TETFARVDVINVSSGAVKH 76 (168)
Q Consensus 5 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~--------~~~~~~l~v~~~~~~~~~~ 76 (168)
+|.|||+++.+.... .... ....+|.+...+.+|.+.|+|.+.+..+. ......|.|...+.
T Consensus 120 ~itW~kg~~~l~~~~----~~~~-~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~----- 189 (291)
T 1mq8_A 120 TVVLLRGEKELKREP----AVGE-PAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPA----- 189 (291)
T ss_dssp EEEEESSSSEEEEEE----CCBT-TEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC----------
T ss_pred EEEEEECCEEeeccc----CCCC-CceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCC-----
Confidence 699999998773211 0112 23457888877788888999999987542 12345666654321
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCC---eEEEeeCCEeccCCCCcEEEecCCEEEEEEccC---CC--CCC
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKP---KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRA---TD--DEN 148 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~---~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~--~d~ 148 (168)
..+.+. .+ ..+.+|+.++|.|.+.|.+++ .+.|.+++..+...... .++ .+.+... .. ++.
T Consensus 190 -~~~~~~-~p---~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~~~~----~g~--~~~~~~~~~~~~~~~~~ 258 (291)
T 1mq8_A 190 -TPPQLV-SP---RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTY----GND--SFSAKASVSVTAEDEGT 258 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -CCceec-CC---cCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCceeee----cCC--eEEEEEecceeEcCCCC
Confidence 111111 12 247799999999999987554 59999988877642110 111 2222222 23 336
Q ss_pred eeEEEEEEcCC
Q psy16859 149 GTYFIVARNIY 159 (168)
Q Consensus 149 g~y~C~~~n~~ 159 (168)
+.|+|.+.|..
T Consensus 259 ~~~~C~~~~~~ 269 (291)
T 1mq8_A 259 QRLTCAVILGN 269 (291)
T ss_dssp -----------
T ss_pred EEEEEEEEeCC
Confidence 67888888744
No 375
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=2.4e-12 Score=71.97 Aligned_cols=61 Identities=23% Similarity=0.559 Sum_probs=49.7
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEe
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVIN 68 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 68 (168)
|.|.+.|+|++..+. ...++.+..+ +....|.|.+++.+|+|.|+|.+.| ....+.|.|..
T Consensus 35 ~~~~v~W~k~g~~~~-~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~V~~ 95 (103)
T 2edf_A 35 AGTPVHWLKDRKAIR-KSQKYDVVCE-GTMAMLVIRGASLKDAGEYTCEVEA----SKSTASLHVEE 95 (103)
T ss_dssp SSCCCCEEESSCBCC-CSSSEEEEEE-TTEEEEEESSCCTTTCSEEEEECSS----CEEEEEEEECC
T ss_pred CCCcEEEEECCEEcc-CCCCEEEEEC-CCEEEEEECCCCcccCEEEEEEEcc----CCcEEEEEEeC
Confidence 678899999999884 4557877766 5677899999999999999999988 34567777754
No 376
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.38 E-value=8.6e-12 Score=77.18 Aligned_cols=80 Identities=13% Similarity=0.221 Sum_probs=61.7
Q ss_pred CCeEEecCCcceEeec-CCeEEEEEEEccCCC--CeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 79 PAMFLTRPDTMMSVAL-GEDISFSFRLAGSPK--PKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~-g~~~~l~C~~~~~p~--~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
||.+...+ ...+.+ |+.+.|.|.+.+.|. +.+.|++++..+....... ....|.|.++..+|+|.|+|.+
T Consensus 3 ~P~i~~~~--~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~ 75 (190)
T 2wv3_A 3 EPRIVTSE--EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVY 75 (190)
T ss_dssp CCEEEECC--CEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEE
T ss_pred CCcccccc--eEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEE
Confidence 45555533 345556 999999999998876 7899999998876543321 4478999999999999999999
Q ss_pred EcCCceeeEEE
Q psy16859 156 RNIYGSDRAFV 166 (168)
Q Consensus 156 ~n~~g~~~~~~ 166 (168)
.|. |.....+
T Consensus 76 ~n~-~~~~~~~ 85 (190)
T 2wv3_A 76 HFV-SAPKANA 85 (190)
T ss_dssp EET-TEEEEEE
T ss_pred EeC-CcccccE
Confidence 998 7665444
No 377
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.38 E-value=5.1e-13 Score=93.86 Aligned_cols=80 Identities=26% Similarity=0.394 Sum_probs=60.9
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+..............++|.|.+++.+|+|.|+|.|.|..|..+..+.
T Consensus 393 ~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 472 (477)
T 2id5_A 393 QQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAH 472 (477)
T ss_dssp EEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEECTTSCEEESSCCSTTCEEEEEEEEETTEEEEEEEE
T ss_pred ccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEeCCCCEEEEeeCChHHCEEEEEEEEeCCCcEEEEEE
Confidence 56788999999999999999999999999887654321111111111236999999999999999999999998876654
No 378
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.37 E-value=8e-12 Score=78.05 Aligned_cols=81 Identities=12% Similarity=0.124 Sum_probs=59.3
Q ss_pred CCcceEeecCCeEEEEEEEccCCC-----CeEEEee-CCEeccCCCCcEEEec---CCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 86 PDTMMSVALGEDISFSFRLAGSPK-----PKVTWMK-GIKDITTSSRTMTETV---NDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 86 ~~~~~~~~~g~~~~l~C~~~~~p~-----~~~~W~~-~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
|...+.+..|+.+.|.|.+.+.|. +.+.|++ ++.......+...... ....+|.|.+++.+|+|.|+|.+.
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 335678899999999999998876 7899999 4444333334433221 134789999999999999999999
Q ss_pred cCCceeeEEE
Q psy16859 157 NIYGSDRAFV 166 (168)
Q Consensus 157 n~~g~~~~~~ 166 (168)
|..|.....+
T Consensus 88 ~~~~~~~~~~ 97 (202)
T 3bp6_B 88 CGAAWDYKYL 97 (202)
T ss_dssp ETTEEEEEEE
T ss_pred eCCCcceEEE
Confidence 9988665544
No 379
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=5.9e-12 Score=70.25 Aligned_cols=61 Identities=23% Similarity=0.432 Sum_probs=48.5
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
.|.|.+.|+|++..+. ...++.+... +....|.|.+++.+|+|.|+|.+.+. ...+.|.|.
T Consensus 37 ~p~~~v~W~k~g~~~~-~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a~~~----~~~~~l~V~ 97 (102)
T 2eo1_A 37 QAQTEVTWYKDGKKLS-SSSKVRVEAV-GCTRRLVVQQAGQAEAGEYSCEAGGQ----QLSFRLQVA 97 (102)
T ss_dssp CSSSCCEEEETTEECC-CCSSEEEEEE-TTEEEEEETTCCTTTCSCEEEEETTE----ECCEEEEEE
T ss_pred CCCCceEEEECCEECC-CCCCEEEEEc-CCEEEEEECCCCcccCEEEEEEcCCC----cEEEEEEEe
Confidence 4789999999999984 4457777766 66678999999999999999998543 345677774
No 380
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.37 E-value=1e-11 Score=70.06 Aligned_cols=72 Identities=19% Similarity=0.279 Sum_probs=55.1
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC--E---ec---------cCCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI--K---DI---------TTSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~---~~---------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+.+|++++|.|.+.+.|.+.+.|++.. . .+ ....++.........+|.|.+++.+|+|.|.|
T Consensus 9 ~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C 88 (108)
T 1jhl_L 9 SYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFAMYIC 88 (108)
T ss_dssp SEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCCSEEEE
T ss_pred CeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHCEEEEE
Confidence 4678899999999999999888899999843 1 11 01234444434455789999999999999999
Q ss_pred EEEcCC
Q psy16859 154 VARNIY 159 (168)
Q Consensus 154 ~~~n~~ 159 (168)
.+.|..
T Consensus 89 ~~~n~~ 94 (108)
T 1jhl_L 89 QQHNEY 94 (108)
T ss_dssp EECSSS
T ss_pred EEccCC
Confidence 999864
No 381
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=4.3e-12 Score=71.14 Aligned_cols=61 Identities=20% Similarity=0.346 Sum_probs=47.5
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDV 66 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 66 (168)
.|.|.|.|+|++..+.....++.+... +...+|.|.+++.+|+|.|+|.+.+ ....+.|.|
T Consensus 42 ~p~~~v~W~k~g~~l~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~~----~~~~~~l~V 102 (104)
T 1pd6_A 42 DHDAEVKWLKNGQEIQMSGSKYIFESI-GAKRTLTISQCSLADDAAYQCVVGG----EKCSTELFV 102 (104)
T ss_dssp SSSSCCEEEESSSEECCCSSSSEEEEE-TTEEEEEECSCSSSSCEEEEEEETT----EEECCEEEE
T ss_pred CCCCEEEEEECCEECCCCCCeEEEEec-CCEEEEEECCCCcccCEEEEEEECC----CcEEEEEEE
Confidence 478899999999988544367877766 5677899999999999999999943 334455555
No 382
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=5.9e-12 Score=70.49 Aligned_cols=62 Identities=23% Similarity=0.402 Sum_probs=48.9
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
.|.| +.|+|++..+. ...++.+... +....|.|.+++.+|+|.|+|.+.|..+ .+.|.|..+
T Consensus 37 ~p~~-v~W~k~g~~~~-~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a~n~~~----~~~l~V~~~ 98 (104)
T 2e6p_A 37 VDFP-ATWYKDGQKVE-ESELLVVKMD-GRKHRLILPEAKVQDSGEFECRTEGVSA----FFGVTVQDP 98 (104)
T ss_dssp TTCC-CEEEETTEECC-CBTTBEEEEE-TTEEEEEESSCCTTTCEEEEEECSSCCC----CEEEEEECC
T ss_pred CCCc-cEEeeCCEECC-CCCCEEEEeC-CCEEEEEECCCChhhCEEEEEEECCceE----EEEEEEcCC
Confidence 3677 99999999984 4457776666 6667899999999999999999988633 556777543
No 383
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.36 E-value=2.4e-11 Score=76.26 Aligned_cols=76 Identities=18% Similarity=0.212 Sum_probs=64.3
Q ss_pred eecCCeEEEEEEEccC-CCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 92 VALGEDISFSFRLAGS-PKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 92 ~~~g~~~~l~C~~~~~-p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
...++.+.|.|.+.+. |.+.+.|++++..+....++..........|.|.++..+|+|.|+|.+.|..|.....+.
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~ 90 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVD 90 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EEcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEE
Confidence 4477889999999884 588999999999998877777666666678999999999999999999999888765543
No 384
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.35 E-value=4.7e-12 Score=71.20 Aligned_cols=61 Identities=18% Similarity=0.312 Sum_probs=48.3
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
|.| +.|||++..+. ...++.+... +....|.|.+++.+|+|.|+|.+.|. .....+.|.|.
T Consensus 36 ~~~-v~W~k~g~~~~-~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n~--~~~~~~~l~V~ 96 (106)
T 2dlt_A 36 KVT-GKWYKNGVEVR-PSKRITISHV-GRFHKLVIDDVRPEDEGDYTFVPDGY--ALSLSAKLNFL 96 (106)
T ss_dssp SCE-EEEEESSCBCC-CCSSCEEEEE-TTEEEEEESSCCTTTCSCEEEEEETS--CCCCCBCEEEE
T ss_pred Ccc-eEEEcCCEECc-CCCCEEEEEe-CCEEEEEECCCCcCCCEEEEEEEccC--CceEEEEEEEE
Confidence 556 99999999884 4557777766 66678999999999999999999987 33445566664
No 385
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=7.1e-12 Score=70.05 Aligned_cols=63 Identities=21% Similarity=0.317 Sum_probs=50.8
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
.|.|.+.|++++..+. ...++.+... +....|.|.+++.+|+|.|+|. .+.....+.|.|...
T Consensus 34 ~p~~~v~W~k~~~~l~-~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l~V~~~ 96 (103)
T 2dku_A 34 HPAATVTWRKGLLELR-ASGKHQPSQE-GLTLRLTISALEKADSDTYTCD----IGQAQSRAQLLVQGR 96 (103)
T ss_dssp SCCSCCEEEESSCBCC-SSSSEEEEEE-TTEEEEEEESCCTTTCSEEEEE----CSSCBCCEEEEEECS
T ss_pred CCCCeEEEEeCCEECC-CCCeEEEEeC-CCEEEEEECCCCcccCEEEEEE----eCCceEEEEEEEeCc
Confidence 4788999999999884 4557877766 6677899999999999999998 455666778888654
No 386
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.35 E-value=1.3e-11 Score=70.13 Aligned_cols=60 Identities=30% Similarity=0.488 Sum_probs=49.2
Q ss_pred CceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEe
Q psy16859 3 KPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVIN 68 (168)
Q Consensus 3 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 68 (168)
.|.+.|||++..+. ...++.+..+ +....|.|.+++.+|+|.|+|.+ +.....+.|.|..
T Consensus 46 ~p~v~W~k~~~~l~-~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~~~l~V~~ 105 (113)
T 2edh_A 46 MAPVEWWKGHETLR-DGDRHSLRQD-GARCELQIRGLVAEDAGEYLCMC----GKERTSAMLTVRA 105 (113)
T ss_dssp CCCCEEEESSSBCC-CSSSEEEEEE-TTEEEEEECSCCSTTCEEEEEEE----TTEEEEEEEEECC
T ss_pred CCcEEEEECCEECC-CCCcEEEEEC-CCEEEEEECCCChhhCEEEEEEe----CCCCEEEEEEEeC
Confidence 37899999999884 4568887776 66778999999999999999999 5556677888843
No 387
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.34 E-value=7e-12 Score=77.56 Aligned_cols=80 Identities=20% Similarity=0.307 Sum_probs=62.9
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCC-CCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTS-SRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
+|.+...+ ..+.+..|+.+.|.|.+.+.|.+.+.|++++..+... .++...... ..|.|.+++.+|+|.|+|.+.|
T Consensus 7 ~P~i~~~~-~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~ 83 (192)
T 2iep_A 7 APVITTPL-ETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENG--QLLTILSVEDSDDGIYCCTANN 83 (192)
T ss_dssp EEEESSCC-CEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGG--TEEEESSCCGGGCEEEEEEEEC
T ss_pred CceeecCc-cceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCc--cEEEEcCCCcccCeEEEEEEEc
Confidence 44444444 5678899999999999999999999999999887653 233332222 3699999999999999999999
Q ss_pred CCce
Q psy16859 158 IYGS 161 (168)
Q Consensus 158 ~~g~ 161 (168)
..|.
T Consensus 84 ~~~~ 87 (192)
T 2iep_A 84 GVGG 87 (192)
T ss_dssp SSSC
T ss_pred CCCc
Confidence 8876
No 388
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.34 E-value=2.3e-12 Score=72.29 Aligned_cols=60 Identities=20% Similarity=0.293 Sum_probs=48.4
Q ss_pred ceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 4 PEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 4 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
+.+.|||++..+. ...++.+..+ +...+|.|.+++.+|+|.|+|.+.+ ....+.|.|..+
T Consensus 39 ~~v~W~k~g~~i~-~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~~----~~~~a~L~V~~~ 98 (104)
T 2eny_A 39 DPAMWTVGGKTVG-SSSRFQATRQ-GRKYILVVREAAPSDAGEVVFSVRG----LTSKASLIVRER 98 (104)
T ss_dssp SCBCCBSSSSBCS-BCSSCEEEEE-TTEEEEEECSCCTTTCSCEEEEETT----EEEEECEEEECC
T ss_pred ceeEEEECCEECC-CCCCEEEEEc-CCEEEEEECCCCHHHCEEEEEEECC----eeEEEEEEEeCC
Confidence 4799999999984 4557877766 6678999999999999999998854 346778888644
No 389
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.34 E-value=2.9e-11 Score=75.71 Aligned_cols=78 Identities=14% Similarity=0.251 Sum_probs=57.4
Q ss_pred cCCcceEeecCCeEEEEEEEccCCCCeEEEeeCC-EeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCceee
Q psy16859 85 RPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGI-KDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 85 ~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 163 (168)
.|...+.+.+|+.+.|.|.+.|.|.+.+.|.+.. ..+. . ..........|.|.+++.+|+|.|+|.|.|..|..+
T Consensus 6 ~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~--~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~ 81 (202)
T 1vca_A 6 TPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--G--KVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLE 81 (202)
T ss_dssp ESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--S--EEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEE
T ss_pred CCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--c--eEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEe
Confidence 3433445569999999999999999999998742 2111 1 112233456799999999999999999999988765
Q ss_pred EEE
Q psy16859 164 AFV 166 (168)
Q Consensus 164 ~~~ 166 (168)
..+
T Consensus 82 ~~~ 84 (202)
T 1vca_A 82 KGI 84 (202)
T ss_dssp EEE
T ss_pred eEE
Confidence 444
No 390
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.33 E-value=7.2e-12 Score=78.61 Aligned_cols=78 Identities=19% Similarity=0.251 Sum_probs=61.7
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCe-EEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPK-VTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.|.+...| ....+.+|+.+.|.|.+.+.|.+. +.|++++..+.... ..|.|.+++.+|+|.|+|.+.|
T Consensus 7 ~p~i~~~p-~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n 75 (204)
T 3sgj_C 7 KAVVFLEP-QWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQL 75 (204)
T ss_dssp BCEEEEES-CCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEETT
T ss_pred CCeEEEcC-CCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeCC
Confidence 34555556 346789999999999999988776 99999998776432 4799999999999999999998
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
...+....+.
T Consensus 76 ~~~s~~~~l~ 85 (204)
T 3sgj_C 76 STLSDPVQLE 85 (204)
T ss_dssp SBCCCCEEEE
T ss_pred CcccccEEEE
Confidence 6655555443
No 391
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.33 E-value=1.9e-12 Score=82.30 Aligned_cols=79 Identities=23% Similarity=0.399 Sum_probs=62.4
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEE-EecCCEEEEEEccCCCCCCeeEEEEEEcCCceeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMT-ETVNDYVRLTLKRATDDENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 166 (168)
....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+... ........|.|.++...|+|.|+|.+.|..|.....+
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 106 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 106 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccE
Confidence 467788999999999999999999999999988765443211 1122234799999999999999999999988776443
No 392
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.33 E-value=7.6e-12 Score=77.88 Aligned_cols=78 Identities=13% Similarity=0.141 Sum_probs=59.4
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
+|.+...|. . .+..|+.++|.|.+.+ +.+.+.|++++..+...... .........|.|.+++.+|+|.|+|.+.|.
T Consensus 5 ~P~i~~~p~-~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 3p2t_A 5 KPTLWAEPG-S-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQN-PLEPKNKARFSIPSMTEDYAGRYRCYYRSP 80 (196)
T ss_dssp CCEEEEESC-S-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEEC-CCSSSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCEEEccCC-C-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccc-cccCCceEEEEeccCCcccCceEEEEEeCC
Confidence 455666663 3 7889999999999988 77899999998766431110 011134578999999999999999999998
Q ss_pred Cc
Q psy16859 159 YG 160 (168)
Q Consensus 159 ~g 160 (168)
.|
T Consensus 81 ~g 82 (196)
T 3p2t_A 81 VG 82 (196)
T ss_dssp TE
T ss_pred Cc
Confidence 87
No 393
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.33 E-value=6.6e-12 Score=79.22 Aligned_cols=85 Identities=20% Similarity=0.436 Sum_probs=64.4
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCC--cEEEecCCE--EEEEEccCCCCCCeeEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSR--TMTETVNDY--VRLTLKRATDDENGTYF 152 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~--~~~~~~~~~--~~l~i~~~~~~d~g~y~ 152 (168)
..+|.+...+ ..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ......... ..+.|.++..+|+|.|+
T Consensus 7 ~~~P~i~~~p-~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 85 (217)
T 2vr9_A 7 YQSPRIIEHP-TDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYW 85 (217)
T ss_dssp CCCCEEEECC-CCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEE
T ss_pred cCCCEEecCC-CceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEE
Confidence 4567777766 568899999999999999999999999999988765421 222222221 22367788999999999
Q ss_pred EEEEcCCcee
Q psy16859 153 IVARNIYGSD 162 (168)
Q Consensus 153 C~~~n~~g~~ 162 (168)
|.+.|..|..
T Consensus 86 C~~~n~~g~~ 95 (217)
T 2vr9_A 86 CVAKNRVGQA 95 (217)
T ss_dssp EEEEETTEEE
T ss_pred EEEecCCCcc
Confidence 9999988865
No 394
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.32 E-value=5.4e-12 Score=80.84 Aligned_cols=79 Identities=22% Similarity=0.437 Sum_probs=62.6
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcE-EEecCCEEEEEEccCCCCCCeeEEEEEEcCCceeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTM-TETVNDYVRLTLKRATDDENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~~ 166 (168)
..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+....... .........|.|.++...|+|.|+|.+.|..|.....+
T Consensus 23 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~ 102 (241)
T 3grw_A 23 KLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTY 102 (241)
T ss_dssp CEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEE
Confidence 46788899999999999999999999999998876544321 11122234799999999999999999999988776544
No 395
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.32 E-value=6.7e-12 Score=87.44 Aligned_cols=86 Identities=17% Similarity=0.249 Sum_probs=63.0
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCC-EeccCCCC-cEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGI-KDITTSSR-TMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~-~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
+|.+...+ ....+.+|+.++|.|.+ +.|.+.+.|++++ ..+..... ..... ...++|.|.+++.+|+|.|+|.|.
T Consensus 341 ~P~i~~~~-~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~ 417 (440)
T 3zyj_A 341 APVIVEPP-ADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAV-LSDGTLNFTNVTVQDTGMYTCMVS 417 (440)
T ss_dssp CCCEEECC-CCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEE-CTTCCEEESSCCSTTCEEEEEEEE
T ss_pred CCcccccc-cceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEE-ccCCeEEEccCChhhCEEEEEEEE
Confidence 45555555 57789999999999999 5688999999844 33332211 11111 122469999999999999999999
Q ss_pred cCCceeeEEEE
Q psy16859 157 NIYGSDRAFVT 167 (168)
Q Consensus 157 n~~g~~~~~~~ 167 (168)
|..|..++.+.
T Consensus 418 N~~G~~~~~~~ 428 (440)
T 3zyj_A 418 NSVGNTTASAT 428 (440)
T ss_dssp CSSCEEEEEEE
T ss_pred cCCCcEEEEEE
Confidence 99999887664
No 396
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.31 E-value=3.3e-11 Score=70.52 Aligned_cols=76 Identities=16% Similarity=0.298 Sum_probs=57.7
Q ss_pred EEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeC--CEe----ccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 82 FLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKG--IKD----ITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~--~~~----~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
+...| ..+.+.+|+.++|.|.+.+. +.+.|+++ +.. +....++.........+|.|.+++.+|+|.|+|.+
T Consensus 20 v~q~p-~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a 96 (133)
T 3khq_A 20 IWQHP-RFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQ 96 (133)
T ss_dssp EEEEC-SEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred eEEcC-ceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEEE
Confidence 34444 56788999999999999886 88999985 221 12344565555555678999999999999999999
Q ss_pred EcCCc
Q psy16859 156 RNIYG 160 (168)
Q Consensus 156 ~n~~g 160 (168)
.|..|
T Consensus 97 ~n~~g 101 (133)
T 3khq_A 97 KCDSA 101 (133)
T ss_dssp SSCC-
T ss_pred EeCCC
Confidence 99865
No 397
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=3e-12 Score=71.39 Aligned_cols=59 Identities=25% Similarity=0.546 Sum_probs=45.6
Q ss_pred ceEEEEECCEecCCCCC---ceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 4 PEVIWLRGNTPLPKSSP---RFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 4 p~v~W~~~~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
|.+.|||++..+..... ++.+... +....|.|.+++.+|+|.|+|.+.| ....+.|.|.
T Consensus 37 ~~v~W~k~g~~i~~~~~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~~~l~V~ 98 (101)
T 2edk_A 37 AQVMWMKNGVELTREDSFKARYRFKKD-GKRHILIFSDVVQEDRGRYQVITNG----GQCEAELIVE 98 (101)
T ss_dssp CCCEEEESSCBCCCSCCSSCCCEEEEC-SSEEEEECSSCCGGGCSBEEEECSS----CEECCBEEEE
T ss_pred CEEEEEECCEECCCCCCcceeEEEEEC-CCEEEEEECCCChhhCEEEEEEEcC----CcEEEEEEEe
Confidence 89999999998843321 6677766 6677899999999999999999986 2334556664
No 398
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=2.2e-11 Score=68.89 Aligned_cols=63 Identities=16% Similarity=0.227 Sum_probs=48.3
Q ss_pred CceEEEEECCEecCCCC--C-------ceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 3 KPEVIWLRGNTPLPKSS--P-------RFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 3 ~p~v~W~~~~~~~~~~~--~-------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
.|.+.|||||++|.... . |+.+..+ +..++|.|.+++.+|+|.|+|..-+ ....++.|.|..+
T Consensus 35 ~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~-g~~~~L~I~~v~~~D~G~Y~~~~~~---~~~ssA~L~V~~~ 106 (112)
T 2e6q_A 35 IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQK-GLQHRLILHAVKHQDSGALVGFSCP---GVQDSAALTIQES 106 (112)
T ss_dssp CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCB-TTEEEEEEESCCSTTCSEEEEEEET---TEEEEEEEEEECS
T ss_pred CCeEEEEECCEECccCcccccccccccEEEEEeC-CcEEEEEECCCCHHHCccEEEEEEC---CeeEEEEEEEeCC
Confidence 57899999999995432 1 7777666 6678999999999999999875543 3346788999654
No 399
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.30 E-value=2.1e-11 Score=77.14 Aligned_cols=74 Identities=19% Similarity=0.310 Sum_probs=61.5
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
.+.+...| ..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++...|+|.|+|.+.|.
T Consensus 18 ~~~i~~~p-~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~~~n~ 87 (218)
T 3k0w_A 18 GSKITVNP-ESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN---------TSELIFNAVHVKDAGFYVCRVNNN 87 (218)
T ss_dssp -CCEEECC-CCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC---------SSEEEETTCCGGGCEEEEEEEECT
T ss_pred CCEEEECC-CCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC---------CCEEEEccCChhhCeEeEEEEEcC
Confidence 44556666 57889999999999999999999999999998876432 247999999999999999999998
Q ss_pred Ccee
Q psy16859 159 YGSD 162 (168)
Q Consensus 159 ~g~~ 162 (168)
.|..
T Consensus 88 ~~~~ 91 (218)
T 3k0w_A 88 FTFE 91 (218)
T ss_dssp TCCE
T ss_pred CCCc
Confidence 7743
No 400
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.30 E-value=1.4e-11 Score=68.81 Aligned_cols=62 Identities=23% Similarity=0.564 Sum_probs=49.0
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
.|.| +.|++++..+. ...++.+..+ +...+|.|.+++.+|+|.|+|. .+.....+.|.|..+
T Consensus 35 ~p~~-v~W~k~~~~l~-~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l~V~~~ 96 (103)
T 2e7b_A 35 VAAP-VKWCYGNNVLR-PGDKYSLRQE-GAMLELVVRNLRPQDSGRYSCS----FGDQTTSATLTVTAL 96 (103)
T ss_dssp CCCS-CEEEESSSBCC-CSSSEEEEEC-SSEEEEEECSCCTTTCCCEEEE----CSSCBCCBCEEEECC
T ss_pred CCCC-eEEEECCEECC-CCCcEEEEEc-CCEEEEEEccCCcccCEEEEEE----ECCcEEEEEEEEEec
Confidence 3677 99999999883 4568887776 6678899999999999999998 345555677777543
No 401
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.29 E-value=1.6e-11 Score=75.06 Aligned_cols=78 Identities=19% Similarity=0.231 Sum_probs=62.0
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCe-EEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPK-VTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
+|.+...| ....+.+|+.+.|.|.+.+.|.+. +.|++++..+.. ....|.|.+++.+|+|.|+|.+.|
T Consensus 7 ~p~i~~~p-~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~----------~~~~L~i~~~~~~d~G~Y~C~~~n 75 (175)
T 1fnl_A 7 KAVVFLEP-QWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS----------QASSYFIDAATVNDSGEYRCQTNL 75 (175)
T ss_dssp CCEEEEES-CCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES----------SCSEEEESSCCGGGCEEEEEECSS
T ss_pred CCEEEEcC-CceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC----------CceEEEEeCCCcccCEEEEEEeeC
Confidence 45566666 356789999999999999888766 889999887653 224799999999999999999999
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
..++....+.
T Consensus 76 ~~~s~~~~l~ 85 (175)
T 1fnl_A 76 STLSDPVQLE 85 (175)
T ss_dssp SCCCCCEEEE
T ss_pred CcccccEEEE
Confidence 7776655543
No 402
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.29 E-value=2.3e-11 Score=66.39 Aligned_cols=55 Identities=20% Similarity=0.427 Sum_probs=44.2
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDV 66 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v 66 (168)
+|.|.+.|++++..+.... . ..|.|.+++.+|+|.|+|.+.|..|.... .+.|.|
T Consensus 30 ~p~p~i~W~~~~~~~~~~~---------~--~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 85 (91)
T 3bfo_A 30 SPIPHYQWFKNELPLTHET---------K--KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIII 85 (91)
T ss_dssp SSCCEEEEEETTEECTTCC---------S--SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEE
T ss_pred CCCCEEEEEcCCeeCCcCC---------C--CeEEECCCCHHhCEEEEEEEEcCCCCEEeeeEEEEE
Confidence 5889999999999884322 1 27999999999999999999999886543 466666
No 403
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.29 E-value=1.8e-11 Score=70.74 Aligned_cols=69 Identities=16% Similarity=0.300 Sum_probs=51.8
Q ss_pred CCCceEEEEECCEecC-------CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEecc
Q psy16859 1 YVKPEVIWLRGNTPLP-------KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVS 70 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 70 (168)
.|.|.+.|++++..+. ....|+.+........+|.|.+++.+|+|.|+|.+.|. +.....+.|.|..++
T Consensus 28 ~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~-g~~~~~~~l~V~~~P 103 (124)
T 3rbg_A 28 RKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSD-SVSTKEVKVIVLATM 103 (124)
T ss_dssp CTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESS-SEEEEEEEEEEECC-
T ss_pred cCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcC-CCCcEEEEEEEEeCC
Confidence 3789999998654321 13456666543345679999999999999999999998 888888888886543
No 404
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=6.2e-12 Score=71.78 Aligned_cols=64 Identities=19% Similarity=0.242 Sum_probs=47.5
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
.|.|.+.||+++..+. ...++.+....++..+|.|.+++.+|+|.|+|.+ |.....+.|.|...
T Consensus 40 ~p~p~v~W~k~g~~l~-~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~----g~~~~~~~L~V~~~ 103 (115)
T 2cr6_A 40 ANYEPVHWFLDKTPLH-ANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRVTEK 103 (115)
T ss_dssp TTCCSCEEEESSCEEC-CSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE----TTEECCEEEEEECC
T ss_pred CCCCccEEEECCEECC-CCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE----CCeeEEEEEEEECC
Confidence 4778999999999884 3445554422144568999999999999999993 55556778888643
No 405
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.28 E-value=2.3e-11 Score=68.39 Aligned_cols=67 Identities=18% Similarity=0.287 Sum_probs=50.5
Q ss_pred CCCceEEEEECCE-ecC------CCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEe
Q psy16859 1 YVKPEVIWLRGNT-PLP------KSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVIN 68 (168)
Q Consensus 1 ~p~p~v~W~~~~~-~~~------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 68 (168)
.|.|.+.|++++. .+. ....|+.+........+|.|.+++.+|+|.|+|.+.| .+.....+.|.|..
T Consensus 33 ~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~~~~~~~~~L~V~~ 106 (108)
T 3m45_A 33 NDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT-MPVKTSKAYLTVLG 106 (108)
T ss_dssp CSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-SSCEEEEEEEEEEC
T ss_pred CCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-CCCcEEEEEEEEEc
Confidence 3678999999775 221 1334777654434567999999999999999999999 77777778888853
No 406
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.28 E-value=4e-11 Score=67.55 Aligned_cols=61 Identities=23% Similarity=0.425 Sum_probs=48.4
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEe
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVIN 68 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 68 (168)
+.|.+.|++++..+. ...++.+... +...+|.|.+++.+|+|.|+|.+.| ....+.|.|..
T Consensus 34 ~~p~v~W~k~~~~~~-~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~V~~ 94 (108)
T 2dm7_A 34 KVAPVEWKKGPETLR-DGGRYSLKQD-GTRCELQIHDLSVADAGEYSCMCGQ----ERTSATLTVRA 94 (108)
T ss_dssp SSCCCEEESSSSBCC-SSSSCEEEEE-TTEEEEEESSCCTTTCSEEEEEETT----EEEEEECEEEC
T ss_pred CCCeeEEEECCEECC-CCCCEEEEec-CCEEEEEECCCCcccCEEEEEEEcC----CEEEEEEEEec
Confidence 347899999999884 4567877766 6667899999999999999999944 35566777754
No 407
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.28 E-value=3.3e-11 Score=67.94 Aligned_cols=64 Identities=22% Similarity=0.390 Sum_probs=47.7
Q ss_pred ceEEEEECCEe-cC-CCCCceEEEec-----CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEE
Q psy16859 4 PEVIWLRGNTP-LP-KSSPRFKYIED-----SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 4 p~v~W~~~~~~-~~-~~~~~~~~~~~-----~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
|.|.|||++.. +. ....++.+... .....+|.|.+++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 37 p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 37 PVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEEecCCCceEEEEEEEEe
Confidence 99999998732 21 12235554321 0125689999999999999999999999999888888883
No 408
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.28 E-value=3.6e-11 Score=74.12 Aligned_cols=80 Identities=21% Similarity=0.289 Sum_probs=56.6
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
+.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+............ ...|.|.++...|.|.|+|.+.|..
T Consensus 3 ~~~~~~~-~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~~~~~~ 80 (189)
T 2v5t_A 3 LTFREVV-SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA-NNNLQILNINKSDEGIYRCEGRVEA 80 (189)
T ss_dssp CEEEECC-SSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECT-TSCEEETTCCGGGCEEEEEEEEETT
T ss_pred ceeeccC-CCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEec-CCCEEEeeCCHhHCcEEEEEEEEcC
Confidence 4455555 4678899999999999999999999999988776543222211111 2369999999999999999999987
Q ss_pred ce
Q psy16859 160 GS 161 (168)
Q Consensus 160 g~ 161 (168)
+.
T Consensus 81 ~~ 82 (189)
T 2v5t_A 81 RG 82 (189)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 409
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.27 E-value=3e-11 Score=66.82 Aligned_cols=59 Identities=22% Similarity=0.337 Sum_probs=45.2
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDV 66 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 66 (168)
.|.|.+.|++++..... .+...... +|.|.+++.+|+|.|.|.+.|..|.....+.|.|
T Consensus 38 ~p~~~v~W~k~~~~~~~--~~~~~~~~-----~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 96 (98)
T 1gl4_B 38 SPAYTLVWTRLHNGKLP--SRAMDFNG-----ILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHV 96 (98)
T ss_dssp SSCCEEEEEEGGGBCCC--TTEEEETT-----EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCcEEEEEeCCCCCCC--ceeecCCC-----EEEEeCCChhhCEEEEEEecCCCCccccEEEEEE
Confidence 47899999997644321 22222222 7999999999999999999999998887777777
No 410
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.27 E-value=2.4e-11 Score=75.63 Aligned_cols=79 Identities=11% Similarity=0.131 Sum_probs=59.3
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
+|.+...|. ..+.+|+.++|.|.+.+.|. .+.|++++..+...... .........|.|.++..+|+|.|+|.+.|.
T Consensus 5 ~P~i~~~p~--~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 5 KATLWAEPG--SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQN-PLEPKNKARFSIPSMTEHHAGRYRCYYYSP 80 (196)
T ss_dssp BCEEEEESC--SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEEC-CCSSTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCEEEeCCC--CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCccccc-ccCCccccEEEeccCChhHCeEEEEEEeCC
Confidence 556666664 36889999999999988665 99999998766432110 011234578999999999999999999998
Q ss_pred Cce
Q psy16859 159 YGS 161 (168)
Q Consensus 159 ~g~ 161 (168)
.|.
T Consensus 81 ~g~ 83 (196)
T 2d3v_A 81 AGW 83 (196)
T ss_dssp TEE
T ss_pred CCc
Confidence 763
No 411
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.27 E-value=2.2e-10 Score=67.46 Aligned_cols=80 Identities=16% Similarity=0.240 Sum_probs=56.1
Q ss_pred cceEeecCCeEEEEEEEccCC---CCeEEEeeCCEe--cc-------------C--CCCcEEEec---CCEEEEEEccCC
Q psy16859 88 TMMSVALGEDISFSFRLAGSP---KPKVTWMKGIKD--IT-------------T--SSRTMTETV---NDYVRLTLKRAT 144 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p---~~~~~W~~~~~~--~~-------------~--~~~~~~~~~---~~~~~l~i~~~~ 144 (168)
..+.+..|++++|.|.+.+.+ .+.+.|++.+.. +. . ..+...... ....+|.|.+++
T Consensus 14 ~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~ 93 (139)
T 1pko_A 14 HPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVR 93 (139)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccCC
Confidence 567889999999999987644 267999986531 10 0 122222221 135689999999
Q ss_pred CCCCeeEEEEEEcCCceeeEEEE
Q psy16859 145 DDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 145 ~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
.+|+|.|+|.+.|..|.....+.
T Consensus 94 ~~D~G~Y~C~v~~~~~~~~~~~~ 116 (139)
T 1pko_A 94 FSDEGGYTCFFRDHSYQEEAAVE 116 (139)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE
T ss_pred HHHCEEEEEEEEcCCCceEEEEE
Confidence 99999999999999886665443
No 412
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.27 E-value=5.9e-11 Score=68.09 Aligned_cols=71 Identities=17% Similarity=0.309 Sum_probs=54.0
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC--E---ecc---------CCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI--K---DIT---------TSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+.+|++++|.|.+.+.+.+.+.|++.. . .+. ...++.........+|.|.+++.+|+|.|.|
T Consensus 11 ~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C 90 (119)
T 2e27_L 11 SSLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPEDAATYYC 90 (119)
T ss_dssp SEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CeEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChHHCEEEEE
Confidence 4678899999999999988887889999742 1 110 1234444434455789999999999999999
Q ss_pred EEEcC
Q psy16859 154 VARNI 158 (168)
Q Consensus 154 ~~~n~ 158 (168)
.+.|.
T Consensus 91 ~~~~~ 95 (119)
T 2e27_L 91 LQYDN 95 (119)
T ss_dssp EECGG
T ss_pred EEccC
Confidence 99875
No 413
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.26 E-value=4.2e-11 Score=85.92 Aligned_cols=64 Identities=28% Similarity=0.476 Sum_probs=58.2
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDV 66 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 66 (168)
.|.|+|.|+++++.| ....++.+... ++..+|.|.++..+|+|.|+|.+.|..|.....+.|+|
T Consensus 509 ~P~P~v~W~k~~~el-~~s~~~~i~~~-~~~~~L~I~~~~~~D~G~Yt~~A~N~~G~~~~~v~l~V 572 (573)
T 3uto_A 509 SSPPVVTWHKDDREL-KQSVKYMKRYN-GNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNV 572 (573)
T ss_dssp SSCCEEEEEETTEEC-CSSSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCeEEEEECCEEc-ccCCcEEEEEc-CCEEEEEEcCCCcccCcEEEEEEEeCCCcEEEEEEEEE
Confidence 489999999999999 45668888877 78889999999999999999999999999999888887
No 414
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.26 E-value=3.4e-11 Score=81.85 Aligned_cols=75 Identities=13% Similarity=0.144 Sum_probs=59.6
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCC----CcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCceee
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSS----RTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 163 (168)
..+.+.+|+.+.|.|.+.| |.+.+.|++++..+.... ++.. . .++|.|.+++.+|+|.|+|.|.|..|..+
T Consensus 254 ~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~--~--~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~ 328 (361)
T 2xot_A 254 SAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV--R--NGDLFFKKVQVEDGGVYTCYAMGETFNET 328 (361)
T ss_dssp CCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE--E--TTEEEESSCCTTSCEEEEEEEECSSCEEE
T ss_pred cCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe--e--cCeEEEeecCcccCEEEEEEEecCCCccE
Confidence 4668899999999999998 999999999665432211 2333 2 23799999999999999999999999888
Q ss_pred EEEE
Q psy16859 164 AFVT 167 (168)
Q Consensus 164 ~~~~ 167 (168)
..+.
T Consensus 329 ~~~~ 332 (361)
T 2xot_A 329 LSVE 332 (361)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 415
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.26 E-value=1.2e-12 Score=69.58 Aligned_cols=59 Identities=14% Similarity=0.269 Sum_probs=48.1
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccC-CCCCCeeEEEEEEc
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRA-TDDENGTYFIVARN 157 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~g~y~C~~~n 157 (168)
....+..|++++|.|.+.|.|. +.|++++..+... ...+|.|.++ ..+|+|.|+|.|.+
T Consensus 7 ~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~---------~~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 7 EYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQK---------HDKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCEEEEETTEEEEECSSCCCSS--CEEEETTEECTTC---------CSSCCBCCSCCTTTTCSCEEEECSS
T ss_pred ceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcCC---------CCCEEEECccCccCcCEEEEEEEcc
Confidence 3455678999999999999873 9999999988643 1236999996 78999999999876
No 416
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.26 E-value=1.2e-10 Score=65.77 Aligned_cols=71 Identities=13% Similarity=0.244 Sum_probs=54.0
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC--E---ecc---------CCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI--K---DIT---------TSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+.+|++++|.|.+.+.+.+.+.|++.. . .+. ...++.........+|.|.+++.+|+|.|.|
T Consensus 11 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C 90 (109)
T 2q20_A 11 SSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYC 90 (109)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChhhCEEEEE
Confidence 4678899999999999988777889999743 1 110 1234444334455789999999999999999
Q ss_pred EEEcC
Q psy16859 154 VARNI 158 (168)
Q Consensus 154 ~~~n~ 158 (168)
.+.|.
T Consensus 91 ~~~~~ 95 (109)
T 2q20_A 91 QQYDN 95 (109)
T ss_dssp EECSS
T ss_pred EEeeC
Confidence 99885
No 417
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.26 E-value=2.5e-11 Score=76.14 Aligned_cols=63 Identities=25% Similarity=0.501 Sum_probs=51.4
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEEe
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVIN 68 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~ 68 (168)
+|.|.+.|++++..+.....++..... .|.|.+++.+|+|.|+|.+.|..|.... .+.|.|..
T Consensus 139 ~p~~~v~W~~~~~~l~~~~~~~~~~~~-----~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~ 202 (212)
T 2v9r_A 139 HPEPTISWKKDGSPLDDKDERITIRGG-----KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLE 202 (212)
T ss_dssp ESCCEEEEEETTEEECTTSTTEEEETT-----EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCCCEEEEEECCccCCCCcceEEccCC-----eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEe
Confidence 488999999999998655555554433 7999999999999999999999888665 47888853
No 418
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.25 E-value=2e-10 Score=63.17 Aligned_cols=76 Identities=18% Similarity=0.141 Sum_probs=55.9
Q ss_pred cceEeecCCeEEEEEEEcc-CCCCeEEEeeCC----EeccCCCCcE--EEecC--CEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 88 TMMSVALGEDISFSFRLAG-SPKPKVTWMKGI----KDITTSSRTM--TETVN--DYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~-~p~~~~~W~~~~----~~~~~~~~~~--~~~~~--~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
....+..|+.+.|.|.+.+ .+.|.+.|.+.+ ..+....... ..... ....|.+.++...|+|.|+|.|.|.
T Consensus 22 S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~ 101 (122)
T 1xau_A 22 SKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFN 101 (122)
T ss_dssp EEEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEET
T ss_pred ccEEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeCC
Confidence 4567889999999999976 689999999854 2332222211 11111 3468999999999999999999998
Q ss_pred Cceee
Q psy16859 159 YGSDR 163 (168)
Q Consensus 159 ~g~~~ 163 (168)
.|..+
T Consensus 102 ~g~ie 106 (122)
T 1xau_A 102 SQVIN 106 (122)
T ss_dssp TEEEE
T ss_pred CCcee
Confidence 87665
No 419
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.25 E-value=3e-11 Score=75.76 Aligned_cols=69 Identities=20% Similarity=0.315 Sum_probs=54.6
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCEec------------cCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDI------------TTSSRTMTETVNDYVRLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 155 (168)
..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....+.... . ..|.|.++..+|+|.|+|.+
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~--~~L~i~~v~~~D~G~Y~C~~ 84 (212)
T 1f97_A 9 SDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS--S--SGITFSSVTRKDNGEYTCMV 84 (212)
T ss_dssp SEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE--T--TEEEESCCCGGGCEEEEEEE
T ss_pred CCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee--c--eeEEEcccCcccCeEEEEEE
Confidence 5778899999999999999899999999876542 112222222 1 47999999999999999999
Q ss_pred EcCCc
Q psy16859 156 RNIYG 160 (168)
Q Consensus 156 ~n~~g 160 (168)
.|..|
T Consensus 85 ~~~~g 89 (212)
T 1f97_A 85 SEEGG 89 (212)
T ss_dssp EETTS
T ss_pred EccCC
Confidence 99876
No 420
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.25 E-value=6.6e-11 Score=74.42 Aligned_cols=73 Identities=14% Similarity=0.173 Sum_probs=56.8
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC--Eecc------------CCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI--KDIT------------TSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+.+|+.+.|.|.+.+.|.+.+.|+++. ..+. ...++.........+|.|.+++.+|+|.|+|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (213)
T 3nl4_L 9 ASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYYC 88 (213)
T ss_dssp SEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEEE
Confidence 4678899999999999999989999999832 1110 1234444444556789999999999999999
Q ss_pred EEEcCCc
Q psy16859 154 VARNIYG 160 (168)
Q Consensus 154 ~~~n~~g 160 (168)
.+.|..+
T Consensus 89 ~~~~~~~ 95 (213)
T 3nl4_L 89 QSTYENP 95 (213)
T ss_dssp EECCSST
T ss_pred ecCCCCc
Confidence 9999765
No 421
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.25 E-value=8.1e-11 Score=67.63 Aligned_cols=72 Identities=15% Similarity=0.266 Sum_probs=54.5
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC--Ee---c-c--------CCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI--KD---I-T--------TSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~~---~-~--------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+.+|+.++|.|.+.+.+.+.+.|++.. .. + . ...++.........+|.|.+++.+|+|.|.|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C 88 (120)
T 1mqk_L 9 VSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDFGSYYC 88 (120)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CeEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHHCEEEEE
Confidence 4678899999999999988777889999842 11 1 0 1234444434455789999999999999999
Q ss_pred EEEcCC
Q psy16859 154 VARNIY 159 (168)
Q Consensus 154 ~~~n~~ 159 (168)
.+.|..
T Consensus 89 ~~~~~~ 94 (120)
T 1mqk_L 89 QHHYGT 94 (120)
T ss_dssp EECSSS
T ss_pred EEEeCC
Confidence 999853
No 422
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.25 E-value=8e-11 Score=66.26 Aligned_cols=71 Identities=15% Similarity=0.293 Sum_probs=53.8
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC--Ee---cc---------CCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI--KD---IT---------TSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~~---~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+.+|++++|.|.+.+.+.+.+.|++.. .. +. ...++.........+|.|.+++.+|+|.|.|
T Consensus 9 ~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C 88 (107)
T 1i8k_A 9 ASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYC 88 (107)
T ss_dssp SEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CeEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEE
Confidence 4677889999999999988777889999742 11 10 1234444434455789999999999999999
Q ss_pred EEEcC
Q psy16859 154 VARNI 158 (168)
Q Consensus 154 ~~~n~ 158 (168)
.+.+.
T Consensus 89 ~~~~~ 93 (107)
T 1i8k_A 89 LQSFN 93 (107)
T ss_dssp EECSS
T ss_pred EEeeC
Confidence 99875
No 423
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.24 E-value=1.4e-10 Score=72.99 Aligned_cols=73 Identities=14% Similarity=0.261 Sum_probs=56.0
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC--Eec------------cCCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI--KDI------------TTSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+.+|+.+.|.|.+.+.|.+.+.|++.. ... ....++.........+|.|.+++.+|+|.|+|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (213)
T 3r06_A 9 SSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYC 88 (213)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEE
T ss_pred CEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEEE
Confidence 4678899999999999999888999999732 100 11234444444456789999999999999999
Q ss_pred EEEcCCc
Q psy16859 154 VARNIYG 160 (168)
Q Consensus 154 ~~~n~~g 160 (168)
.+.|..+
T Consensus 89 ~~~~~~~ 95 (213)
T 3r06_A 89 QQYYNYP 95 (213)
T ss_dssp EECSSSS
T ss_pred ecccCCc
Confidence 9998754
No 424
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.24 E-value=1e-10 Score=73.58 Aligned_cols=72 Identities=15% Similarity=0.237 Sum_probs=56.4
Q ss_pred ceEeecCCeEEEEEEEccCCCCeEEEeeC--CEecc------------CCCCcEEEecCCEEEEEEccCCCCCCeeEEEE
Q psy16859 89 MMSVALGEDISFSFRLAGSPKPKVTWMKG--IKDIT------------TSSRTMTETVNDYVRLTLKRATDDENGTYFIV 154 (168)
Q Consensus 89 ~~~~~~g~~~~l~C~~~~~p~~~~~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 154 (168)
.+.+.+|+.+.|.|.+.+.|.+.+.|++. +.... ...++.........+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEE
Confidence 57788999999999999889999999982 21110 12344444455567899999999999999999
Q ss_pred EEcCCc
Q psy16859 155 ARNIYG 160 (168)
Q Consensus 155 ~~n~~g 160 (168)
+.|..|
T Consensus 89 ~~~~~~ 94 (213)
T 3mj8_L 89 SWDGTN 94 (213)
T ss_dssp EEETTT
T ss_pred eccCCc
Confidence 999887
No 425
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.24 E-value=5.7e-11 Score=66.95 Aligned_cols=71 Identities=15% Similarity=0.240 Sum_probs=52.3
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC--E---ecc---------CCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI--K---DIT---------TSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+.+|++++|.|.+.+.+.+.+.|++.. . .+. ...++.........+|.|.+++.+|+|.|.|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C 88 (108)
T 1qfw_M 9 KSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAEDFADYHC 88 (108)
T ss_dssp SCEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTCCSEEEE
T ss_pred CeEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhhCEEEEE
Confidence 4577889999999999988777789999743 1 110 0123332222345689999999999999999
Q ss_pred EEEcC
Q psy16859 154 VARNI 158 (168)
Q Consensus 154 ~~~n~ 158 (168)
.+.+.
T Consensus 89 ~~~~~ 93 (108)
T 1qfw_M 89 GQTYN 93 (108)
T ss_dssp EECSS
T ss_pred EEccC
Confidence 99985
No 426
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.23 E-value=1.7e-11 Score=75.00 Aligned_cols=78 Identities=12% Similarity=0.190 Sum_probs=60.0
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCC-eEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKP-KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
+|.+...| ....+.+|+.+.|.|.+.+.+.+ .+.|++++..+... ...|.|.+++.+|+|.|+|.+.|
T Consensus 4 ~P~i~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~~~~ 72 (176)
T 1f2q_A 4 KPKVSLNP-PWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET----------NSSLNIVNAKFEDSGEYKCQHQQ 72 (176)
T ss_dssp CCCCEEES-SCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC----------SSEEEECSCCGGGCEEEEEECTT
T ss_pred CCEEEcCC-CCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC----------ceEEEEeccceecCEEEEEEcCC
Confidence 44555556 35678999999999999988775 59999999877532 24799999999999999999999
Q ss_pred CCceeeEEEE
Q psy16859 158 IYGSDRAFVT 167 (168)
Q Consensus 158 ~~g~~~~~~~ 167 (168)
..++....+.
T Consensus 73 ~~~s~~~~l~ 82 (176)
T 1f2q_A 73 VNESEPVYLE 82 (176)
T ss_dssp SSCCCCEEEE
T ss_pred ccccccEEEE
Confidence 8776665554
No 427
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.23 E-value=6.3e-11 Score=68.18 Aligned_cols=68 Identities=22% Similarity=0.231 Sum_probs=48.1
Q ss_pred CCceEEEEECCEecCC----CCCceEEEec--CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 2 VKPEVIWLRGNTPLPK----SSPRFKYIED--SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~----~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
|.+.+.|++++..+.. ...+...... .....+|.|.+++.+|+|.|+|.+.|..|.....+.|.|..+
T Consensus 38 ~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~l~V~~~ 111 (122)
T 3s35_X 38 VGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEK 111 (122)
T ss_dssp CCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEE
T ss_pred CcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccCCCceEEEEEEEEecc
Confidence 4578999998874421 1111111111 013457999999999999999999999998888888998653
No 428
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.23 E-value=2.6e-10 Score=72.42 Aligned_cols=82 Identities=17% Similarity=0.281 Sum_probs=58.1
Q ss_pred CCcceEeecCCeEEEEEEEccCCCC---eEEEeeCCEe-----------ccCC------CCcEEEe---cCCEEEEEEcc
Q psy16859 86 PDTMMSVALGEDISFSFRLAGSPKP---KVTWMKGIKD-----------ITTS------SRTMTET---VNDYVRLTLKR 142 (168)
Q Consensus 86 ~~~~~~~~~g~~~~l~C~~~~~p~~---~~~W~~~~~~-----------~~~~------~~~~~~~---~~~~~~l~i~~ 142 (168)
|...+.+.+|++++|.|.+.+.+.+ .+.|++++.. +... .+..... .....+|.|.+
T Consensus 10 P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 89 (226)
T 4f80_A 10 PSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHN 89 (226)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEee
Confidence 4456788999999999999865544 6999986532 1110 1111111 12346899999
Q ss_pred CCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 143 ATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 143 ~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
++.+|+|.|+|.|.|..|.....++
T Consensus 90 v~~~D~G~Y~C~a~n~~~~~~~~v~ 114 (226)
T 4f80_A 90 VTASDSGKYLCYFQDGDFYEKALVE 114 (226)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CchHHCeeEEEEEECCCcEEEEEEE
Confidence 9999999999999999988876654
No 429
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.23 E-value=5.3e-11 Score=73.75 Aligned_cols=117 Identities=14% Similarity=0.153 Sum_probs=75.2
Q ss_pred EEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCCCe
Q psy16859 33 TLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPKPK 111 (168)
Q Consensus 33 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~ 111 (168)
.+.|.+++ +|.+.|.|.+.-........+.|.|...| ....+.+. ...+.+|+.++|.|.+.+ .|...
T Consensus 53 ~~~ls~vs-~d~~~~~C~~~c~~~~~~~~v~l~Vy~~P---------~~v~i~~~-~~~~~~G~~~tL~C~v~~~~P~~~ 121 (196)
T 3bn3_B 53 ARQLVDIR-EPETQPVCFFRCARRTLQARGLIRTFQRP---------DRVELMPL-PPWQPVGENFTLSCRVPGAGPRAS 121 (196)
T ss_dssp EEEEEEEC-SSEECCEEEEEETTEEEEEECEEEEEBCC---------CCCEECCC-CSSEETTSEEEEEEEETTCBCGGG
T ss_pred EEEEEEEc-cCCCceEEEEECCCCceEEEEEEEEecCC---------CcCEEccC-CccccCCCcEEEEEEeCCccCCCC
Confidence 48889998 88888999976544445557788886533 23333332 224789999999999997 45444
Q ss_pred --EEEeeCCEeccCCCCcEEEec--CCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 112 --VTWMKGIKDITTSSRTMTETV--NDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 112 --~~W~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
+.|++++..+........... .....+.+.....++...|+|.|.|..+
T Consensus 122 L~i~wlkg~~~l~~~~~~~~~~~~~~~t~~~~~~~~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 122 LTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARREDHGANFSCRAELDLR 174 (196)
T ss_dssp EEEEEEETTEEEEEEECTTSCTTCCCEEEEEEEECCGGGTTCEEEEEEEEECG
T ss_pred cEEEEEeCCEEeeccccccccccccceeEEEEEeeeeccCCCeEEEEEEccCC
Confidence 799999987643210000000 0114455655555555599999999766
No 430
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.23 E-value=3.9e-11 Score=78.33 Aligned_cols=102 Identities=13% Similarity=0.170 Sum_probs=51.5
Q ss_pred CCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeC-
Q psy16859 39 VTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKG- 117 (168)
Q Consensus 39 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~- 117 (168)
..+.|.+.|.|.+.+..|.......+.| ...| ..+.+.+|+.++|.|.+.+ +.+.+.|++.
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~~~v----------------~~~p-~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~ 64 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGGMKV----------------IQTP-RYLVKGQGQKAKMRCIPEK-GHPVVFWYQQN 64 (270)
T ss_dssp -------------------------CCC----------------EEEC-SEEEEETTSCEEEEEECCT-TCCEEEEEEEC
T ss_pred chhhhHHHHHHHHhccCCccccccceeE----------------EeCC-CeEEEcCCCCEEEEEEecC-CCceEEEEEEC
Confidence 4578899999999887655443333333 2223 4677889999999999865 7788999972
Q ss_pred -CEecc------------CC---C-CcEEEe-cCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 118 -IKDIT------------TS---S-RTMTET-VNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 118 -~~~~~------------~~---~-~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
+.... .. . ++.... .....+|.|.+++.+|+|.|.|.+.+.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 123 (270)
T 3qib_D 65 KNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLN 123 (270)
T ss_dssp TTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESC
T ss_pred CCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecC
Confidence 11100 00 0 222221 223578999999999999999999964
No 431
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.23 E-value=1.7e-10 Score=72.51 Aligned_cols=74 Identities=20% Similarity=0.301 Sum_probs=57.2
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC--Eec------------cCCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI--KDI------------TTSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+..|+.+.|.|.+.+.|.+.+.|+++. ..+ ....++.........+|.|.+++.+|+|.|+|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (213)
T 3d9a_L 9 ATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFC 88 (213)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred ccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEE
Confidence 4678899999999999999888899999742 111 11134444444456789999999999999999
Q ss_pred EEEcCCce
Q psy16859 154 VARNIYGS 161 (168)
Q Consensus 154 ~~~n~~g~ 161 (168)
.+.|..+.
T Consensus 89 ~~~~~~~~ 96 (213)
T 3d9a_L 89 QQSNSWPY 96 (213)
T ss_dssp EECSSSSC
T ss_pred eeecCCcc
Confidence 99998764
No 432
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=99.23 E-value=2.9e-09 Score=67.33 Aligned_cols=138 Identities=22% Similarity=0.321 Sum_probs=85.1
Q ss_pred CCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEEeccCC-C----cc-----cCC-CCeEEec
Q psy16859 19 SPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVINVSSG-A----VK-----HEK-PAMFLTR 85 (168)
Q Consensus 19 ~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~-~----~~-----~~~-~~~~~~~ 85 (168)
..||.+..+ +.+...|.+.+++.+|++.|.|.-.. ....+. -..++|..-... + .. ... ...+...
T Consensus 65 kgR~TiSrD~s~nt~yLqm~sL~~eDTAvYYCAr~~-~~d~WGqGT~VTVSSast~~ps~~~l~~~~sgGSgsdivltQs 143 (254)
T 4f9p_D 65 KDRTTLTADQSSSTAYMQLSSLTSDDSAVYFCARSD-YGAYWGQGTLVTVSAAGGGGSGGGGSGGGGSGGGGSDIVLTQS 143 (254)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEECEESS-SCCEECCCEEEEECC-------------------CCSCCEEEE
T ss_pred CCCEEEeeccCCCcCeeEEccCCCCCCEEEEEEecC-CCCCcCCCEEEEEeCCCCcCCCCCCCccccccccccccccccC
Confidence 357877654 57788999999999999999996532 111111 234444211000 0 00 000 0122333
Q ss_pred CCcceEeecCCeEEEEEEEccCCCCeEEEeeC--CEe---c---------cCCCCcEEEecCCEEEEEEccCCCCCCeeE
Q psy16859 86 PDTMMSVALGEDISFSFRLAGSPKPKVTWMKG--IKD---I---------TTSSRTMTETVNDYVRLTLKRATDDENGTY 151 (168)
Q Consensus 86 ~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~--~~~---~---------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 151 (168)
| ..+.+..|+.++|.|.........+.|++. ++. + ...+++.....+...+|+|..++.+|.+.|
T Consensus 144 P-~slsvs~G~~vtlsC~~S~~~~~~l~WyqQ~PG~~p~lLiy~~s~~~sGvp~RFSgS~sgt~ftLtIs~lq~eD~A~Y 222 (254)
T 4f9p_D 144 P-VTLSVTPGDSVSLSCRASQSISNNLHWYRQKSHESPRLLIKYASQSIFGIPSRFSGSGSGTEFTLSINSVETEDFGIY 222 (254)
T ss_dssp C-SEEEECTTCEEEEEEEESSCCTTCCEEEEECTTSCCEEEEETTTEECTTSCTTCEEECCTTEEEEEEESCCTTCCEEE
T ss_pred C-ceeEEcCCCcEeeEEEccCcccCCcEEEEECCCCCCEEEEEeeeecCCCCCCCEEeeeeCCEEEEEECCCCHHHCEEE
Confidence 4 567788999999999987655556889862 221 1 022355544444557899999999999999
Q ss_pred EEEEEcC
Q psy16859 152 FIVARNI 158 (168)
Q Consensus 152 ~C~~~n~ 158 (168)
.|.-.+.
T Consensus 223 YC~q~~~ 229 (254)
T 4f9p_D 223 FCQQSNS 229 (254)
T ss_dssp EEEECSS
T ss_pred EEeecCC
Confidence 9976554
No 433
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.23 E-value=1e-11 Score=86.77 Aligned_cols=83 Identities=17% Similarity=0.290 Sum_probs=61.6
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeC-CEeccCCC---CcEEEecCCEEEEEEccCCCCCCeeEEEE
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKG-IKDITTSS---RTMTETVNDYVRLTLKRATDDENGTYFIV 154 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~-~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 154 (168)
+|.+...+ ....+.+|+.++|.|.+. |.|.+.|+++ +..+.... +.... ..++|.|.+++.+|+|.|+|.
T Consensus 352 ~P~i~~~~-~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~---~~g~L~i~~v~~~D~G~Y~C~ 425 (452)
T 3zyi_A 352 APFIMDAP-RDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVL---NDGTLNFSHVLLSDTGVYTCM 425 (452)
T ss_dssp CCCCSBCC-CCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEEC---TTSCEECSSCCTTCCEEEEEE
T ss_pred Cccccccc-ccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEEC---CCCeEEEeecCHHHCEEEEEE
Confidence 34444444 567889999999999987 9999999984 44443221 22211 123699999999999999999
Q ss_pred EEcCCceeeEEEE
Q psy16859 155 ARNIYGSDRAFVT 167 (168)
Q Consensus 155 ~~n~~g~~~~~~~ 167 (168)
|.|..|...+.+.
T Consensus 426 a~N~~G~~~~~~~ 438 (452)
T 3zyi_A 426 VTNVAGNSNASAY 438 (452)
T ss_dssp EECSSCEEEEEEE
T ss_pred EEcCCCcEEEEEE
Confidence 9999999887654
No 434
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.22 E-value=3.4e-10 Score=64.07 Aligned_cols=70 Identities=17% Similarity=0.235 Sum_probs=52.4
Q ss_pred cceEeecCCeEEEEEEEccC--CCCeEEEeeC--CE----eccCCCCcEEEe--cCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 88 TMMSVALGEDISFSFRLAGS--PKPKVTWMKG--IK----DITTSSRTMTET--VNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~--p~~~~~W~~~--~~----~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
..+.+.+|++++|.|.+.+. +.+.+.|++. +. .+....++.... .....+|.|.+++.+|+|.|.|.+.|
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 87 (111)
T 2ywz_A 8 RTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQADY 87 (111)
T ss_dssp SEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCCCEEEEEECCCChhcCEEEEEEEEc
Confidence 46778899999999999875 5678999974 21 222233444322 23457899999999999999999998
No 435
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.21 E-value=1.6e-11 Score=76.38 Aligned_cols=78 Identities=9% Similarity=0.064 Sum_probs=59.6
Q ss_pred CCcceEeecCCeEEEEEE-EccCCC-CeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCceee
Q psy16859 86 PDTMMSVALGEDISFSFR-LAGSPK-PKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSDR 163 (168)
Q Consensus 86 ~~~~~~~~~g~~~~l~C~-~~~~p~-~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~ 163 (168)
+...+.+.+|+.+.|.|. +.+.|. +.+.|++++..+................|.|.++..+|+|.|+|.+.|..+...
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 93 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 93 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEE
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcc
Confidence 335678999999999999 888888 999999988766432222222233335799999999999999999999765544
No 436
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.21 E-value=6.9e-11 Score=72.86 Aligned_cols=71 Identities=13% Similarity=-0.035 Sum_probs=56.2
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.+|.+...|. ..+.+|+.++|.|.+.+ +.+.+.|++++... . .....|.|.+++.+|+|.|+|.+.|
T Consensus 7 ~~P~i~~~p~--~~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~--------~--~~~~~L~i~~v~~~D~G~Y~C~a~n 73 (184)
T 2gi7_A 7 PKPSLQALPS--SLVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR--------Y--QDQAVLFIPAMKRSLAGRYRCSYQN 73 (184)
T ss_dssp CCCEEEEESC--SEEETTCCEEEEEECST-TCSEEEEEETTTCC--------E--ESSSEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCC--ccccCCCcEEEEEeCCC-CCCEEEEEECCccc--------c--CcccEEEECcCChhhCceEEEEEEc
Confidence 4566666664 37889999999999987 77899999987641 1 1224799999999999999999999
Q ss_pred CCce
Q psy16859 158 IYGS 161 (168)
Q Consensus 158 ~~g~ 161 (168)
..|.
T Consensus 74 ~~g~ 77 (184)
T 2gi7_A 74 GSLW 77 (184)
T ss_dssp TTEE
T ss_pred CCCc
Confidence 7753
No 437
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.20 E-value=1.3e-10 Score=68.98 Aligned_cols=65 Identities=17% Similarity=0.357 Sum_probs=50.0
Q ss_pred CCceEEEE---------ECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 2 VKPEVIWL---------RGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 2 p~p~v~W~---------~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
|.+.+.|+ +++..+ ...|+..........+|.|.+++.+|+|.|+|.+.|. +.....+.|.|..+
T Consensus 66 ~~~~i~W~~~~~~~i~~~~~~~~--~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~-~~~~~~~~L~V~~~ 139 (145)
T 1z9m_A 66 EDSSLQWSNPAQQTLYFGEKRAL--RDNRIQLVTSTPHELSISISNVALADEGEYTCSIFTM-PVRTAKSLVTVLGI 139 (145)
T ss_dssp TTCCEEEECTTCCEEEETTEECS--CCTTEEEEEECSSEEEEEECSCCGGGCEEEEEEECSS-SCEEEEEEEEEECC
T ss_pred CCcEEEEECCCCcEEEECCceec--ccCCEEEecCCCCeEEEEECCCChhhCEEEEEEEEcC-CCceEEEEEEEEeC
Confidence 56899999 444443 3457775543355679999999999999999999998 77777888888654
No 438
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.20 E-value=6.6e-12 Score=72.39 Aligned_cols=67 Identities=19% Similarity=0.377 Sum_probs=52.5
Q ss_pred CCCce-EEEEECCEecCC-CCCceEEEec-CCC--EEEEEEcCCCCCCC-eEEEEEEEcccceeeEEEEEEEE
Q psy16859 1 YVKPE-VIWLRGNTPLPK-SSPRFKYIED-SNN--LHTLILSGVTAEEA-GKYTCRVSNEYGYTETFARVDVI 67 (168)
Q Consensus 1 ~p~p~-v~W~~~~~~~~~-~~~~~~~~~~-~~~--~~~l~i~~~~~~d~-G~Y~C~~~~~~~~~~~~~~l~v~ 67 (168)
+|.|. +.|++++..+.. ...++.+... ... ..+|.|.+++.+|. |.|+|.+.|..|.....+.|.|.
T Consensus 40 ~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~~~~~~~l~V~ 112 (122)
T 2cry_A 40 TPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQ 112 (122)
T ss_dssp SSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSCEEEEEECCCCS
T ss_pred cCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCCCeEEEEEEEEEC
Confidence 58887 999999988853 2456665321 122 56899999999999 99999999999998887777774
No 439
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.20 E-value=2.2e-10 Score=65.07 Aligned_cols=72 Identities=21% Similarity=0.392 Sum_probs=52.6
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC--Eec----------cCCCCcEEEe---cCCEEEEEEccCCCCCCeeEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI--KDI----------TTSSRTMTET---VNDYVRLTLKRATDDENGTYF 152 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~~~----------~~~~~~~~~~---~~~~~~l~i~~~~~~d~g~y~ 152 (168)
..+.+.+|+.++|.|.+.+.+ +.+.|++.. ..+ ....++.... .....+|.|.+++.+|+|.|.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 87 (113)
T 1h5b_A 9 SALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDSGTYF 87 (113)
T ss_dssp SEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGCEEEE
T ss_pred CEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhCEEEE
Confidence 467789999999999998754 689999743 111 1122333322 234568999999999999999
Q ss_pred EEEEcCCc
Q psy16859 153 IVARNIYG 160 (168)
Q Consensus 153 C~~~n~~g 160 (168)
|.+.|..|
T Consensus 88 C~~~n~~~ 95 (113)
T 1h5b_A 88 CAAEASSG 95 (113)
T ss_dssp EEEECSSS
T ss_pred EEEecCCC
Confidence 99999765
No 440
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.19 E-value=1.4e-10 Score=65.38 Aligned_cols=73 Identities=12% Similarity=0.186 Sum_probs=51.6
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCC-----eEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKP-----KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYF 152 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-----~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 152 (168)
.+|.+...|. ..+.+|+.++|.|.+.+.+.. .+.|++++..+.. ......|.|..++.+|+|.|+
T Consensus 7 ~kP~l~~~p~--~~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~--------~~~~~~l~i~~v~~~dsG~Y~ 76 (108)
T 4hwn_A 7 PAPILRAVPS--AEPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQS--------RGLSSEFQIPTASEDHSGSYW 76 (108)
T ss_dssp CCCEEEEESC--SSCBTTCCEEEEEEC---------CCEEEEEETTEEEEE--------EESCCEEEESSCCGGGCEEEE
T ss_pred CCCEEEecCC--CcCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccC--------CCcccEEEeCccCcccCeEEE
Confidence 3455655563 247789999999998765443 4999999987642 112247999999999999999
Q ss_pred EEEEcCCc
Q psy16859 153 IVARNIYG 160 (168)
Q Consensus 153 C~~~n~~g 160 (168)
|.+.|..+
T Consensus 77 C~~~~~~~ 84 (108)
T 4hwn_A 77 CEAATEDN 84 (108)
T ss_dssp EEEECTTS
T ss_pred EEEEeCCC
Confidence 99999765
No 441
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.19 E-value=4.9e-10 Score=70.30 Aligned_cols=73 Identities=21% Similarity=0.200 Sum_probs=56.6
Q ss_pred cceEeecCCeEEEEEEEccCCCC--eEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCceeeEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKP--KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYGSDRAF 165 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g~~~~~ 165 (168)
..+.+..|+++.|.|.+ +.|.| .+.|.+....+ .+.. .......|.|.+++.+|.|.|.|.+.|..|.....
T Consensus 15 ~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~--~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~ 88 (210)
T 1gsm_A 15 PVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQ--SDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHT 88 (210)
T ss_dssp SEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEE--EESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEE--ecCCccEEEECccCcccCceEEEEEEeCCCceEEE
Confidence 34688999999999999 88877 99999854333 1111 12445689999999999999999999998876644
Q ss_pred E
Q psy16859 166 V 166 (168)
Q Consensus 166 ~ 166 (168)
+
T Consensus 89 ~ 89 (210)
T 1gsm_A 89 V 89 (210)
T ss_dssp E
T ss_pred E
Confidence 4
No 442
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.19 E-value=1.1e-10 Score=70.89 Aligned_cols=77 Identities=19% Similarity=0.301 Sum_probs=58.8
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCC-CCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSP-KPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
|.+...| ....+.+|+.+.|.|.+.+.| .+.+.|++++..+..... .+.+.++...|+|.|+|.+.|.
T Consensus 5 p~i~~~p-~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~~~~ 73 (170)
T 3ry4_A 5 AVLKLEP-PWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQT 73 (170)
T ss_dssp CEEEEES-CCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEETTS
T ss_pred CEEEeCC-CCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEEeCC
Confidence 4455555 356788999999999999876 578999999988765322 3556688999999999999987
Q ss_pred CceeeEEEE
Q psy16859 159 YGSDRAFVT 167 (168)
Q Consensus 159 ~g~~~~~~~ 167 (168)
.++....+.
T Consensus 74 ~~s~~~~l~ 82 (170)
T 3ry4_A 74 SLSDPVHLT 82 (170)
T ss_dssp BCCCCEEEE
T ss_pred CceEeEEEE
Confidence 666555443
No 443
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.19 E-value=1.9e-10 Score=75.83 Aligned_cols=113 Identities=14% Similarity=0.169 Sum_probs=73.1
Q ss_pred EEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEccC-CCC-
Q psy16859 33 TLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAGS-PKP- 110 (168)
Q Consensus 33 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~- 110 (168)
.|.|.+++.+ |.|.|.+..........+.|.|..++. .+.+.+. ...+..|+.++|.|.+.+. |..
T Consensus 51 ~~~l~~v~~~--~~y~C~~~~~~~~~~~~v~l~V~~~P~---------~v~I~~~-~~~~~~G~~~~LtC~v~g~~P~~~ 118 (291)
T 1mq8_A 51 VYELSNVQED--SQPMCYSNCPDGQSTAKTFLTVYWTPE---------RVELAPL-PSWQPVGKNLTLRCQVEGGAPRAN 118 (291)
T ss_dssp EEEEESCCSC--CCCEEEEECSSCEEEEECEEEECBCCS---------CCCBCCC-CSBCCSSCCCEEEEEECCCBSTTT
T ss_pred EEEEEecccC--CeEEEEEEcCCccEEEEEEEEEecCCC---------CCEEecC-CccccCCCCEEEEEEecCccCCCC
Confidence 5788888754 469999975433344456777754332 2222221 2347789999999999874 433
Q ss_pred -eEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 111 -KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 111 -~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
.+.|++++..+...... ......++.+.....++.+.|+|.|.|..+
T Consensus 119 l~itW~kg~~~l~~~~~~---~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~ 166 (291)
T 1mq8_A 119 LTVVLLRGEKELKREPAV---GEPAEVTTTVLVRRDHHGANFSCRTELDLR 166 (291)
T ss_dssp EEEEEESSSSEEEEEECC---BTTEEEEEECCCSSSCSSCEEEEEEEEECG
T ss_pred cEEEEEECCEEeecccCC---CCCceEEEEeeeeeccCCceEEEEEEecCC
Confidence 58999999766532210 111234566766677777799999999765
No 444
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=99.19 E-value=2.4e-10 Score=64.67 Aligned_cols=71 Identities=15% Similarity=0.282 Sum_probs=53.6
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCE-----ecc---------CCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIK-----DIT---------TSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~-----~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+.+|++++|.|.+.+.+.+.+.|++... .+. ...++.........+|.|.+++.+|+|.|.|
T Consensus 12 ~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C 91 (111)
T 1i3g_L 12 KFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFC 91 (111)
T ss_dssp SEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEE
T ss_pred CEEEEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHHHCEEEEE
Confidence 46788899999999999887777899997431 110 1234444334455789999999999999999
Q ss_pred EEEcC
Q psy16859 154 VARNI 158 (168)
Q Consensus 154 ~~~n~ 158 (168)
.+.+.
T Consensus 92 ~~~~~ 96 (111)
T 1i3g_L 92 QQYSS 96 (111)
T ss_dssp EECSS
T ss_pred EEecC
Confidence 99875
No 445
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.19 E-value=3.7e-10 Score=69.37 Aligned_cols=65 Identities=15% Similarity=0.354 Sum_probs=52.5
Q ss_pred CC-CceEEEEE---CC-EecCCC-CCceEEEecCCCEEEEEEcCCC-CCCCeEEEEEEEcccceeeEEEEEEE
Q psy16859 1 YV-KPEVIWLR---GN-TPLPKS-SPRFKYIEDSNNLHTLILSGVT-AEEAGKYTCRVSNEYGYTETFARVDV 66 (168)
Q Consensus 1 ~p-~p~v~W~~---~~-~~~~~~-~~~~~~~~~~~~~~~l~i~~~~-~~d~G~Y~C~~~~~~~~~~~~~~l~v 66 (168)
+| .|.+.|++ ++ ..+... ..++.+... +....|.|.+++ .+|+|.|+|.+.|..|.....+.|.|
T Consensus 110 ~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 181 (184)
T 3b5h_A 110 VPPVTDWAWYKITDSEDKALMNGSESRFFVSSS-QGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 181 (184)
T ss_dssp SSCCCEEEEEECCSSSCEECCTTGGGTEEEEEE-TTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCCeEEEEEcCCCCCEEeecCCCCEEEEEec-CCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEE
Confidence 46 79999999 44 444322 367877766 666789999999 89999999999999999888888877
No 446
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.18 E-value=1.1e-10 Score=65.80 Aligned_cols=65 Identities=20% Similarity=0.311 Sum_probs=44.7
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCC------CEEEEEEcCCCCCCCeEEEEEEEccccee-eEEEEEEE
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSN------NLHTLILSGVTAEEAGKYTCRVSNEYGYT-ETFARVDV 66 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~------~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v 66 (168)
|.|.+.|++++..+.............. ...+|.|.+++.+|+|.|+|.+.|..|.. ...+.|.|
T Consensus 40 ~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 40 SPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp CCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 4689999999998843211000111101 13689999999999999999999998874 35666665
No 447
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.18 E-value=3.3e-10 Score=71.41 Aligned_cols=72 Identities=11% Similarity=0.186 Sum_probs=54.8
Q ss_pred ceEeecCCeEEEEEEEccC-CCCeEEEeeCC---Ee-------------cc--CCCCcEEEecCCEEEEEEccCCCCCCe
Q psy16859 89 MMSVALGEDISFSFRLAGS-PKPKVTWMKGI---KD-------------IT--TSSRTMTETVNDYVRLTLKRATDDENG 149 (168)
Q Consensus 89 ~~~~~~g~~~~l~C~~~~~-p~~~~~W~~~~---~~-------------~~--~~~~~~~~~~~~~~~l~i~~~~~~d~g 149 (168)
.+.+.+|+.+.|.|.+.+. |.+.+.|++.. .. .. ...++.........+|.|.+++.+|+|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEA 88 (218)
T ss_dssp EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCE
Confidence 6778899999999999998 88999999821 10 00 012344333445578999999999999
Q ss_pred eEEEEEEcCCc
Q psy16859 150 TYFIVARNIYG 160 (168)
Q Consensus 150 ~y~C~~~n~~g 160 (168)
.|.|.+.|..|
T Consensus 89 ~Y~C~~~~~~~ 99 (218)
T 3s96_B 89 IYICGVGDTIK 99 (218)
T ss_dssp EEEEEEEEEET
T ss_pred EEEEEEecCCC
Confidence 99999999776
No 448
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.18 E-value=2.1e-10 Score=72.03 Aligned_cols=74 Identities=16% Similarity=0.227 Sum_probs=56.7
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeC--CEec------------cCCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKG--IKDI------------TTSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~--~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+ ....++..........|.|.+++.+|+|.|.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 87 (210)
T 1lk3_L 8 PALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFC 87 (210)
T ss_dssp SEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEE
Confidence 567889999999999999988889999973 2211 11234444444455689999999999999999
Q ss_pred EEEcCCce
Q psy16859 154 VARNIYGS 161 (168)
Q Consensus 154 ~~~n~~g~ 161 (168)
.+.|..+.
T Consensus 88 ~~~~~~~~ 95 (210)
T 1lk3_L 88 QQSWNGPL 95 (210)
T ss_dssp EECSSSSC
T ss_pred EEEcCCCc
Confidence 99998763
No 449
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.18 E-value=1.5e-10 Score=64.85 Aligned_cols=75 Identities=13% Similarity=0.120 Sum_probs=54.8
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
.|.+...|. . .+..|++++|.|.+.+. ...+.|++++..+... ..........|.|.+++.+|+|.|.|.+.|.
T Consensus 5 kP~i~~~p~-~-~v~~G~~VtL~C~~~~~-~~~~~w~k~g~~~~~~---~~~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~ 78 (105)
T 2vsd_A 5 QPSLSLHPS-Q-GVSLGDTVTLRCHLPRM-AAWVQLWLNGTLRFDK---EKDKEQDAAEFSFAVTNLEDAGTYQCRYQVS 78 (105)
T ss_dssp CCEEEEESC-S-SCCTTCEEEEEEECCSS-CEEEEEEETTEEEEEE---EECTTCSEEEEEEECCSGGGCEEEEEEEEEE
T ss_pred CCEEEeCCC-C-CcCcCCCEEEEEEcCCC-CcEEEEEECCccceee---eccCCCCEEEEEECCCCHHHCeEEEEEEEcC
Confidence 455566563 2 58899999999998764 4578999988754321 0112234568999999999999999999985
Q ss_pred C
Q psy16859 159 Y 159 (168)
Q Consensus 159 ~ 159 (168)
.
T Consensus 79 ~ 79 (105)
T 2vsd_A 79 E 79 (105)
T ss_dssp T
T ss_pred C
Confidence 4
No 450
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.18 E-value=5.4e-10 Score=71.29 Aligned_cols=73 Identities=16% Similarity=0.262 Sum_probs=56.3
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC--Ee------------ccCCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI--KD------------ITTSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~~------------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+.+|+.+.|.|.+.+.+.+.+.|++.. .. .....++.........+|.|.+++.+|+|.|+|
T Consensus 32 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 111 (237)
T 3sob_L 32 SSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC 111 (237)
T ss_dssp SEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEEE
Confidence 4678899999999999999888899999832 11 111234444444556789999999999999999
Q ss_pred EEEcCCc
Q psy16859 154 VARNIYG 160 (168)
Q Consensus 154 ~~~n~~g 160 (168)
.+.|..+
T Consensus 112 ~~~~~~~ 118 (237)
T 3sob_L 112 QQSYTTP 118 (237)
T ss_dssp EECSSSS
T ss_pred eeccCCc
Confidence 9998664
No 451
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.18 E-value=5.1e-11 Score=73.62 Aligned_cols=65 Identities=12% Similarity=0.272 Sum_probs=52.7
Q ss_pred EeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEcc-CCCCCCeeEEEEEEcCCceeeEEE
Q psy16859 91 SVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKR-ATDDENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 91 ~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~n~~g~~~~~~ 166 (168)
....|+.+.|.|.+.+ +. .+.|++++..+.... ..+|.|.+ +..+|+|.|+|.|.|..|.....+
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~---------~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~ 75 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQKH---------DKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYL 75 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSCC---------CSEEEEESCCTTTSCEEEEEECSSCCCCCCEEE
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCCC---------CCEEEECCCCccccCEEEEEEEEeCCCcEEEEE
Confidence 3468999999999987 43 499999999876531 12699999 999999999999999988755444
No 452
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.17 E-value=9.1e-11 Score=67.02 Aligned_cols=66 Identities=23% Similarity=0.438 Sum_probs=43.7
Q ss_pred CCCceEEEEECCEecCCCC--Cc-eEEEecCCCEEEEEE--cCCCCCCCeEEEEEEEcccceeeE-EEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSS--PR-FKYIEDSNNLHTLIL--SGVTAEEAGKYTCRVSNEYGYTET-FARVDV 66 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~--~~-~~~~~~~~~~~~l~i--~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v 66 (168)
+|.|.+.|++++..+.... .+ .......+....+.| .+++.+|+|.|+|.+.|..|.... .+.|.+
T Consensus 36 ~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y~C~a~N~~G~~~s~~~~l~~ 107 (117)
T 2v9t_A 36 RPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEV 107 (117)
T ss_dssp ESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEEEEEEEeCccceEeeeEEEEh
Confidence 4899999999999885322 11 112222122222222 266899999999999999998765 566766
No 453
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=99.16 E-value=1.8e-10 Score=65.24 Aligned_cols=71 Identities=18% Similarity=0.264 Sum_probs=52.6
Q ss_pred cceEeecCCeEEEEEEEccCC----CCeEEEeeCC--E-e--cc---------CCCCcEEEecCCEEEEEEccCCCCCCe
Q psy16859 88 TMMSVALGEDISFSFRLAGSP----KPKVTWMKGI--K-D--IT---------TSSRTMTETVNDYVRLTLKRATDDENG 149 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p----~~~~~W~~~~--~-~--~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g 149 (168)
..+.+.+|+.++|.|.+.+.+ .+.+.|++.. . . +. ...++.........+|.|.+++.+|+|
T Consensus 9 ~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG 88 (111)
T 1j05_L 9 ASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVA 88 (111)
T ss_dssp SEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCCcccCE
Confidence 457788999999999998766 4579999742 1 1 10 123444443445578999999999999
Q ss_pred eEEEEEEcC
Q psy16859 150 TYFIVARNI 158 (168)
Q Consensus 150 ~y~C~~~n~ 158 (168)
.|.|.+.|.
T Consensus 89 ~Y~C~~~~~ 97 (111)
T 1j05_L 89 TYYCQQTNE 97 (111)
T ss_dssp EEEEEECSS
T ss_pred EEEEEEecC
Confidence 999999885
No 454
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.16 E-value=5.1e-10 Score=63.02 Aligned_cols=70 Identities=17% Similarity=0.292 Sum_probs=51.9
Q ss_pred cceEeecCCeEEEEEEEccCC--CCeEEEeeCC--E----eccCCCCcEEEe--cCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 88 TMMSVALGEDISFSFRLAGSP--KPKVTWMKGI--K----DITTSSRTMTET--VNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~~--~----~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
..+.+.+|++++|.|.+.+.+ .+.+.|+++. . .+....++.... .....+|.|.+++.+|+|.|.|.+.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (108)
T 2coq_A 8 RIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDEGSNSASLTIRDLRVEDSGTYKCKAYR 87 (108)
T ss_dssp SEEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred ceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEcCCCCEEEEEECCCCcccCEEEEEEEEe
Confidence 467788999999999998753 4679999852 2 222233444322 23457899999999999999999987
No 455
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.16 E-value=8.4e-11 Score=74.50 Aligned_cols=79 Identities=6% Similarity=-0.037 Sum_probs=56.9
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEE--EEEEccCCCCCCeeEEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYV--RLTLKRATDDENGTYFIVA 155 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~g~y~C~~ 155 (168)
.+|.+...|. ..+.+|+.++|.|.+.+ +.+.+.|++++..+..... ......... .|.|.+++.+|+|.|+|.+
T Consensus 8 ~~P~i~~~p~--~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 83 (218)
T 1uct_A 8 PMPFISAKSS--PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIG-RRLKFWNETDPEFVIDHMDANKAGRYQCQY 83 (218)
T ss_dssp CCCCEEESSC--SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECS-EECC----CCCEEEECSCCGGGCEEEEEEE
T ss_pred CCCEEEecCC--CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccccc-ccCCCCcceeeEEEEcccccccCEEEEEEE
Confidence 4566666664 46889999999999987 6788999998765432211 100111223 7999999999999999999
Q ss_pred EcCCc
Q psy16859 156 RNIYG 160 (168)
Q Consensus 156 ~n~~g 160 (168)
.|..|
T Consensus 84 ~n~~~ 88 (218)
T 1uct_A 84 RIGHY 88 (218)
T ss_dssp EETTT
T ss_pred EcCCC
Confidence 99865
No 456
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.15 E-value=1.2e-10 Score=72.75 Aligned_cols=74 Identities=19% Similarity=0.305 Sum_probs=56.1
Q ss_pred EEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEec------------cCCCCcEEEecCCEEEEEEccCCCCCCe
Q psy16859 82 FLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDI------------TTSSRTMTETVNDYVRLTLKRATDDENG 149 (168)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g 149 (168)
+...+ ..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....+.... . ..|.|.++..+|+|
T Consensus 7 i~~~~-~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~--~~L~i~~~~~~d~G 81 (209)
T 1nbq_A 7 VHSSE-PEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL--P--TGITFKSVTREDTG 81 (209)
T ss_dssp EECSC-SBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE--T--TEEECSCCCTTSCS
T ss_pred EEcCC-CceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee--c--cEEEEeeCCHHHCc
Confidence 33334 5778899999999999999899999999876442 111222222 1 47999999999999
Q ss_pred eEEEEEEcCCc
Q psy16859 150 TYFIVARNIYG 160 (168)
Q Consensus 150 ~y~C~~~n~~g 160 (168)
.|+|.+.|..|
T Consensus 82 ~Y~C~~~~~~g 92 (209)
T 1nbq_A 82 TYTCMVSEEGG 92 (209)
T ss_dssp EEEEEEEETTS
T ss_pred EEEEEEecCCC
Confidence 99999999865
No 457
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.15 E-value=6.7e-10 Score=71.55 Aligned_cols=73 Identities=21% Similarity=0.300 Sum_probs=56.2
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCCE-----e---------ccCCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGIK-----D---------ITTSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~-----~---------~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+.+|+.++|.|.+.+.|.+.+.|++... . .....++.........+|.|.+++.+|+|.|.|
T Consensus 12 ~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 91 (250)
T 3esu_F 12 SSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTYFC 91 (250)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEEEE
Confidence 56778899999999999999999999998421 0 111234444444455689999999999999999
Q ss_pred EEEcCCc
Q psy16859 154 VARNIYG 160 (168)
Q Consensus 154 ~~~n~~g 160 (168)
.+.|..+
T Consensus 92 ~~~n~~~ 98 (250)
T 3esu_F 92 QQGNTLP 98 (250)
T ss_dssp EECSSSS
T ss_pred EEeeCCC
Confidence 9998754
No 458
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.15 E-value=2.5e-10 Score=66.05 Aligned_cols=81 Identities=21% Similarity=0.148 Sum_probs=55.4
Q ss_pred cceEeecCCeEEEEEEEccCCC---CeEEEeeCCEe-----------ccC------CCCcEEEec---CCEEEEEEccCC
Q psy16859 88 TMMSVALGEDISFSFRLAGSPK---PKVTWMKGIKD-----------ITT------SSRTMTETV---NDYVRLTLKRAT 144 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~---~~~~W~~~~~~-----------~~~------~~~~~~~~~---~~~~~l~i~~~~ 144 (168)
..+....|++++|.|.+...+. ..+.|++.+.. ... ..+..+... ....+|.|.+++
T Consensus 13 ~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~ 92 (125)
T 4gos_A 13 VASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQ 92 (125)
T ss_dssp ECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCC
T ss_pred ceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCC
Confidence 3566789999999999864332 35999985421 100 011111111 113579999999
Q ss_pred CCCCeeEEEEEEcCCceeeEEEEC
Q psy16859 145 DDENGTYFIVARNIYGSDRAFVTV 168 (168)
Q Consensus 145 ~~d~g~y~C~~~n~~g~~~~~~~v 168 (168)
.+|+|.|+|.+.|..|..++.++|
T Consensus 93 ~~D~G~Y~C~v~~~~g~~~~~v~L 116 (125)
T 4gos_A 93 LTDAGTYKCYIITSKGKGNANLEY 116 (125)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEE
T ss_pred hHHCEEEEEEEEeCCCeEEEEEEE
Confidence 999999999999999988877754
No 459
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=5.4e-11 Score=65.56 Aligned_cols=55 Identities=20% Similarity=0.546 Sum_probs=41.5
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE--EEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET--FARVDV 66 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~--~~~l~v 66 (168)
+|.|.+.|+|++..+.... . ..|.|.+++.+|+|.|+|.+.|..+.... .+.|.|
T Consensus 37 ~p~~~v~W~k~~~~~~~~~---------~--~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~~~v~V 93 (96)
T 2ens_A 37 QPSPQIHWMKDGVPLPLPP---------S--PVLILPEIGPQDQGTYSCVATHSSHGPQESRAVSISI 93 (96)
T ss_dssp CSSCCCCCEESSSBCSSCC---------C--SEEEEESCCTTTCEEEECEECCSSCCCEECCCEEEEE
T ss_pred CCCCEEEEEECCEECcCCC---------C--CEEEECCCCcccCEEEEEEEEeCCCCcEEEEEEEEEE
Confidence 4789999999998874321 1 27999999999999999999996554333 445554
No 460
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.13 E-value=2.5e-10 Score=65.77 Aligned_cols=80 Identities=16% Similarity=0.244 Sum_probs=55.2
Q ss_pred cceEeecCCeEEEEEEEccCCC----CeEEEeeCC-------Eecc------------C--CCCcEEEec---CCEEEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPK----PKVTWMKGI-------KDIT------------T--SSRTMTETV---NDYVRLT 139 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~----~~~~W~~~~-------~~~~------------~--~~~~~~~~~---~~~~~l~ 139 (168)
..+.+..|+.++|.|.+.+.+. +.+.|++.+ ..+. . ..+...... ....+|.
T Consensus 13 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~ 92 (126)
T 1eaj_A 13 EMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASIN 92 (126)
T ss_dssp EEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEE
T ss_pred ceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEEE
Confidence 5677889999999999986554 349999753 1110 0 112222111 1135799
Q ss_pred EccCCCCCCeeEEEEEEcCCceeeEEEE
Q psy16859 140 LKRATDDENGTYFIVARNIYGSDRAFVT 167 (168)
Q Consensus 140 i~~~~~~d~g~y~C~~~n~~g~~~~~~~ 167 (168)
|.+++.+|+|.|.|.+.|..|.....+.
T Consensus 93 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~ 120 (126)
T 1eaj_A 93 VTNLQLSDIGTYQCKVKKAPGVANKKIH 120 (126)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred ECcCChHHCeEEEEEEEcCCccCCcEEE
Confidence 9999999999999999998887665543
No 461
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=99.13 E-value=1.4e-09 Score=62.91 Aligned_cols=73 Identities=15% Similarity=0.229 Sum_probs=53.6
Q ss_pred cceEeecCCeEEEEEEEccC--CCCeEEEeeC--CE----eccCCCCcEEEe--cCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 88 TMMSVALGEDISFSFRLAGS--PKPKVTWMKG--IK----DITTSSRTMTET--VNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~--p~~~~~W~~~--~~----~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
..+.+.+|++++|.|...+. +.+.+.|++. +. .+....++.... .....+|.|.+++.+|+|.|.|.+.+
T Consensus 8 ~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~ 87 (126)
T 3moq_A 8 RTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQAFY 87 (126)
T ss_dssp SEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred ceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEeCCCCEEEEEECcCChHhCEEEEEEEEE
Confidence 56788999999999999865 4567999983 22 122233444322 23467899999999999999999988
Q ss_pred CCc
Q psy16859 158 IYG 160 (168)
Q Consensus 158 ~~g 160 (168)
..+
T Consensus 88 ~~~ 90 (126)
T 3moq_A 88 VFF 90 (126)
T ss_dssp EEE
T ss_pred cCC
Confidence 654
No 462
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.12 E-value=5.7e-10 Score=70.09 Aligned_cols=73 Identities=15% Similarity=0.289 Sum_probs=55.4
Q ss_pred cceEeecCCeEEEEEEEccCC---CCeEEEeeCC--Eec------------cCCCCcEEEecCCEEEEEEccCCCCCCee
Q psy16859 88 TMMSVALGEDISFSFRLAGSP---KPKVTWMKGI--KDI------------TTSSRTMTETVNDYVRLTLKRATDDENGT 150 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p---~~~~~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 150 (168)
..+.+..|+.+.|.|.+.+.| .+.+.|++++ ..+ ....++.........+|.|.+++.+|+|.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 87 (212)
T 1q0x_L 8 SALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAI 87 (212)
T ss_dssp SEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred CeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEE
Confidence 467789999999999999877 3689999842 221 11234444444455789999999999999
Q ss_pred EEEEEEcCCc
Q psy16859 151 YFIVARNIYG 160 (168)
Q Consensus 151 y~C~~~n~~g 160 (168)
|.|.+.|..+
T Consensus 88 Y~C~~~~~~~ 97 (212)
T 1q0x_L 88 YFCALWSNNK 97 (212)
T ss_dssp EEEEEECSSC
T ss_pred EEEEEecCch
Confidence 9999999865
No 463
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.12 E-value=1.2e-10 Score=78.64 Aligned_cols=88 Identities=18% Similarity=0.160 Sum_probs=67.5
Q ss_pred CCCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCe-eEEEEE
Q psy16859 77 EKPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENG-TYFIVA 155 (168)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~y~C~~ 155 (168)
..+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+...... .......+|.|.++..+|+| .|+|.+
T Consensus 156 c~~P~i~~~~-~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~--~~~~~~~~L~i~~v~~~D~G~~Y~C~a 232 (347)
T 2ifg_A 156 CGVPTLKVQV-PNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMK--SGGLPSLGLTLANVTSDLNRKNVTCWA 232 (347)
T ss_dssp CCCCEEEEEC-CSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECC--CCCSSEEEEEEESCCSTTTTCCEEECC
T ss_pred CCCCceeccC-CceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccccc--ceecccceEEEeeCChHHCCCeEEEEE
Confidence 3456666666 4677899999999999999999999999987654322111 12234578999999999999 999999
Q ss_pred EcCCceeeEEEE
Q psy16859 156 RNIYGSDRAFVT 167 (168)
Q Consensus 156 ~n~~g~~~~~~~ 167 (168)
.|..|.....+.
T Consensus 233 ~n~~g~~~~~~~ 244 (347)
T 2ifg_A 233 ENDVGRAEVSVQ 244 (347)
T ss_dssp EETTEECCEEEC
T ss_pred EcCCCCEEEEEE
Confidence 999988776554
No 464
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.11 E-value=6.4e-10 Score=71.43 Aligned_cols=73 Identities=19% Similarity=0.248 Sum_probs=55.8
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC--Ee---cc---------CCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI--KD---IT---------TSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~~---~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+.+|+.++|.|.+.+.|.+.+.|+++. .. +. ...++.........+|.|.+++.+|+|.|.|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (242)
T 2znx_A 9 ATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFC 88 (242)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEEE
Confidence 4678899999999999999888899999842 11 10 1234444434455789999999999999999
Q ss_pred EEEcCCc
Q psy16859 154 VARNIYG 160 (168)
Q Consensus 154 ~~~n~~g 160 (168)
.+.|..+
T Consensus 89 ~~~n~~~ 95 (242)
T 2znx_A 89 QQSNSXP 95 (242)
T ss_dssp EECSSSS
T ss_pred eEecCCc
Confidence 9999754
No 465
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.11 E-value=5.3e-11 Score=74.14 Aligned_cols=78 Identities=9% Similarity=0.089 Sum_probs=57.0
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
.+|.+...|. ..+.+|+.++|.|.+.+.|. .+.|++++..+....... ........|.|.++..+|+|.|+|.+.|
T Consensus 4 ~~P~i~~~p~--~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (198)
T 1ugn_A 4 PKPTLWAEPG--SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIP-QELVKKGQFPIPSITWEHTGRYRCYYGS 79 (198)
T ss_dssp CCCEEEEESC--SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSC-HHHHTTTEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEeccCC--CcccCCCcEEEEEEecCCCc-EEEEEECCcccccccccc-ccCCcccEEEECCCCHHHCeEEEEEEEC
Confidence 3556666664 37889999999999988765 799999887663211100 0011224799999999999999999999
Q ss_pred CC
Q psy16859 158 IY 159 (168)
Q Consensus 158 ~~ 159 (168)
..
T Consensus 80 ~~ 81 (198)
T 1ugn_A 80 DT 81 (198)
T ss_dssp TT
T ss_pred CC
Confidence 87
No 466
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.11 E-value=4e-10 Score=64.20 Aligned_cols=78 Identities=15% Similarity=0.186 Sum_probs=52.4
Q ss_pred ceEeecCCeEEEEEEEc-cCCCC----eEEEeeCCEec-------------cCCCCcEEEec---C--CEEEEEEccCCC
Q psy16859 89 MMSVALGEDISFSFRLA-GSPKP----KVTWMKGIKDI-------------TTSSRTMTETV---N--DYVRLTLKRATD 145 (168)
Q Consensus 89 ~~~~~~g~~~~l~C~~~-~~p~~----~~~W~~~~~~~-------------~~~~~~~~~~~---~--~~~~l~i~~~~~ 145 (168)
.+.+..|+.++|.|.+. +.+.+ .+.|++++... ....+...... . ...+|.|.+++.
T Consensus 9 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~ 88 (118)
T 3udw_C 9 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRV 88 (118)
T ss_dssp EEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCG
T ss_pred eEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecCh
Confidence 47788999999999994 44443 39999874221 11112221111 0 145899999999
Q ss_pred CCCeeEEEEEEc-CCceeeEEE
Q psy16859 146 DENGTYFIVARN-IYGSDRAFV 166 (168)
Q Consensus 146 ~d~g~y~C~~~n-~~g~~~~~~ 166 (168)
+|+|.|+|.+.+ ..|.....+
T Consensus 89 ~D~G~Y~C~v~~~~~~~~~~~~ 110 (118)
T 3udw_C 89 EDEGNYTCLFVTFPQGSRSVDI 110 (118)
T ss_dssp GGCEEEEEEEEEETTEEEEEEE
T ss_pred HHCeEEEEEEEECCCCCccceE
Confidence 999999999999 666555443
No 467
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.71 E-value=6.9e-12 Score=77.36 Aligned_cols=137 Identities=10% Similarity=0.064 Sum_probs=76.4
Q ss_pred ceEEEEECC--Ee---cC--------CCCCceEEEec-CCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEEEec
Q psy16859 4 PEVIWLRGN--TP---LP--------KSSPRFKYIED-SNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDVINV 69 (168)
Q Consensus 4 p~v~W~~~~--~~---~~--------~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 69 (168)
+.+.||+.. .. +- ....|+.+..+ ..+..+|+|.+++.+|+|.|.|.+.+..........|.|...
T Consensus 30 ~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~R~s~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~fg~gT~L~V~~~ 109 (185)
T 3c6l_A 30 DYFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFNKREKKFSLHIADSQPGDSATYFCAASDNRIFFGDGTQLVVKPN 109 (185)
Confidence 478999854 11 10 02345554422 244568999999999999999998762111112345666432
Q ss_pred cCCCcccCCCCeEEecCCcceEeecCCeEEEEEEEcc-CCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEcc-CCCCC
Q psy16859 70 SSGAVKHEKPAMFLTRPDTMMSVALGEDISFSFRLAG-SPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKR-ATDDE 147 (168)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d 147 (168)
.. ..+|.+...+.. ...++|.|.+.| .|.+.+.|..+...+.......-.. ...+.+.. +.+++
T Consensus 110 ~~-----~~~P~V~~~~~~------~~~vtL~C~~~gf~P~p~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~w~~ 175 (185)
T 3c6l_A 110 IQ-----NPEPAVYQLKDP------RSQDSTLCLFTDFDSQINVPKTMESGTFITDKTVLDMK---AMDSKSNGAIAWSN 175 (185)
Confidence 10 112222221111 127999999988 7888999988766554332211111 11244444 34566
Q ss_pred CeeEEEE
Q psy16859 148 NGTYFIV 154 (168)
Q Consensus 148 ~g~y~C~ 154 (168)
.-.++|.
T Consensus 176 ~~~~~c~ 182 (185)
T 3c6l_A 176 QTSFTCQ 182 (185)
Confidence 6678885
No 468
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=99.11 E-value=5.7e-10 Score=63.44 Aligned_cols=71 Identities=14% Similarity=0.219 Sum_probs=52.5
Q ss_pred cceEeecCCeEEEEEEEccCCC------CeEEEeeCC--E---ecc---------CCCCcEEEecCCEEEEEEccCCCCC
Q psy16859 88 TMMSVALGEDISFSFRLAGSPK------PKVTWMKGI--K---DIT---------TSSRTMTETVNDYVRLTLKRATDDE 147 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~------~~~~W~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d 147 (168)
..+.+.+|+.++|.|.+.+.+. +.+.|++.. . .+. ...++.........+|.|.+++.+|
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 88 (114)
T 1eeq_A 9 DSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAED 88 (114)
T ss_dssp SEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCCCccc
Confidence 4678899999999999987663 579999742 1 110 1234444334455789999999999
Q ss_pred CeeEEEEEEcC
Q psy16859 148 NGTYFIVARNI 158 (168)
Q Consensus 148 ~g~y~C~~~n~ 158 (168)
+|.|.|.+.+.
T Consensus 89 sG~Y~C~~~~~ 99 (114)
T 1eeq_A 89 VAVYYCQQYYS 99 (114)
T ss_dssp CEEEEEEECSS
T ss_pred CEEEEEEEeeC
Confidence 99999999875
No 469
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.11 E-value=5.9e-10 Score=71.35 Aligned_cols=73 Identities=18% Similarity=0.212 Sum_probs=55.3
Q ss_pred cceEeecCCeEEEEEEEccCC----CCeEEEeeCC--Eec---c---------CCCCcEEEecCCEEEEEEccCCCCCCe
Q psy16859 88 TMMSVALGEDISFSFRLAGSP----KPKVTWMKGI--KDI---T---------TSSRTMTETVNDYVRLTLKRATDDENG 149 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p----~~~~~W~~~~--~~~---~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g 149 (168)
..+.+.+|+.++|.|.+.+.| .+.+.|+++. ..+ . ...++.........+|.|.+++.+|+|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (240)
T 1moe_A 9 ASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVA 88 (240)
T ss_dssp SEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCE
Confidence 467889999999999999887 6789999842 111 0 123444444445568999999999999
Q ss_pred eEEEEEEcCCc
Q psy16859 150 TYFIVARNIYG 160 (168)
Q Consensus 150 ~y~C~~~n~~g 160 (168)
.|+|.+.|..+
T Consensus 89 ~Y~C~~~n~~~ 99 (240)
T 1moe_A 89 TYYCQQTNEDP 99 (240)
T ss_dssp EEEEEECSSSS
T ss_pred EEEEEEccCCc
Confidence 99999999854
No 470
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=99.11 E-value=6.4e-10 Score=64.40 Aligned_cols=72 Identities=19% Similarity=0.311 Sum_probs=53.3
Q ss_pred cceEeecCCeEEEEEEEccCC----CCeEEEeeCC--Ee---c---------cCCCCcEEEecCCEEEEEEccCCCCCCe
Q psy16859 88 TMMSVALGEDISFSFRLAGSP----KPKVTWMKGI--KD---I---------TTSSRTMTETVNDYVRLTLKRATDDENG 149 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p----~~~~~W~~~~--~~---~---------~~~~~~~~~~~~~~~~l~i~~~~~~d~g 149 (168)
..+.+.+|++++|.|.+.+.+ .+.+.|++.. .. + ....++.........+|.|.+++.+|+|
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~v~~~DsG 88 (126)
T 4ffy_L 9 ASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVETDDAA 88 (126)
T ss_dssp SEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECCCCHHHCE
Confidence 467889999999999998766 4569999732 11 1 0123444444445678999999999999
Q ss_pred eEEEEEEcCC
Q psy16859 150 TYFIVARNIY 159 (168)
Q Consensus 150 ~y~C~~~n~~ 159 (168)
.|.|.+.+..
T Consensus 89 ~Y~C~~~~~~ 98 (126)
T 4ffy_L 89 TYYCQQNNED 98 (126)
T ss_dssp EEEEEECSSS
T ss_pred EEEEEEecCC
Confidence 9999998853
No 471
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.10 E-value=1.2e-10 Score=71.38 Aligned_cols=71 Identities=23% Similarity=0.289 Sum_probs=52.4
Q ss_pred ceEeecCCeEEEEEEEcc--CCCCeEEEeeCCEecc----------CCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 89 MMSVALGEDISFSFRLAG--SPKPKVTWMKGIKDIT----------TSSRTMTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 89 ~~~~~~g~~~~l~C~~~~--~p~~~~~W~~~~~~~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
.+.+.+|+.+.|.|...+ .+.+.+.|++++..+. ...++... ..++|.|.++..+|+|.|+|.+.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~---~~gsL~I~~v~~~D~G~Y~C~~~ 81 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEIL---ANGDLKIKNLTRDDSGTYNVTVY 81 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEEC---TTSCEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEEC---CCCcEEEcccccccCEEEEEEEE
Confidence 456789999999995333 4566899999886442 22233221 12359999999999999999999
Q ss_pred cCCcee
Q psy16859 157 NIYGSD 162 (168)
Q Consensus 157 n~~g~~ 162 (168)
|..|..
T Consensus 82 n~~g~~ 87 (176)
T 1hng_A 82 STNGTR 87 (176)
T ss_dssp ETTCCE
T ss_pred eCCCCE
Confidence 998875
No 472
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.10 E-value=3.1e-10 Score=64.19 Aligned_cols=67 Identities=16% Similarity=0.177 Sum_probs=47.5
Q ss_pred EeecCCeEEEEEEEccCCCCeEEEeeCCEeccC-------------------CCCcEEEecCCEEEEEEccCCCCCCeeE
Q psy16859 91 SVALGEDISFSFRLAGSPKPKVTWMKGIKDITT-------------------SSRTMTETVNDYVRLTLKRATDDENGTY 151 (168)
Q Consensus 91 ~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~-------------------~~~~~~~~~~~~~~l~i~~~~~~d~g~y 151 (168)
.+.+|+++.|.|.....+...+.|+++...... ..+.... ..++|.|.+++.+|+|.|
T Consensus 11 ~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~---~ngSL~I~nvt~~D~G~Y 87 (111)
T 2qsq_A 11 NVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIY---PNASLLIQNIIQNDAGFY 87 (111)
T ss_dssp EEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEEC---TTSCEEECSCCGGGCEEE
T ss_pred eeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEe---cCCcEEEccCcccCCeEE
Confidence 578999999999854334456999986532210 1122111 224899999999999999
Q ss_pred EEEEEcCCc
Q psy16859 152 FIVARNIYG 160 (168)
Q Consensus 152 ~C~~~n~~g 160 (168)
+|.+.+..+
T Consensus 88 tc~v~~~~~ 96 (111)
T 2qsq_A 88 TLHVIKSDL 96 (111)
T ss_dssp EEEEEETTS
T ss_pred EEEEEeCCC
Confidence 999999865
No 473
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.10 E-value=2.8e-10 Score=73.14 Aligned_cols=75 Identities=16% Similarity=0.243 Sum_probs=54.4
Q ss_pred CCcceEeecCCeEEEEEEEcc---CCCCeEEEeeCCEecc------------------------------CCCCcEEEec
Q psy16859 86 PDTMMSVALGEDISFSFRLAG---SPKPKVTWMKGIKDIT------------------------------TSSRTMTETV 132 (168)
Q Consensus 86 ~~~~~~~~~g~~~~l~C~~~~---~p~~~~~W~~~~~~~~------------------------------~~~~~~~~~~ 132 (168)
+...+.+.+|+.+.|.|.+.+ .|.+.+.|++++.... ...+.....
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~- 86 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN- 86 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC-
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc-
Confidence 335678899999999999987 7888999999764321 000111000
Q ss_pred CCEEEEEEccCCCCCCeeEEEEEEcCCce
Q psy16859 133 NDYVRLTLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 133 ~~~~~l~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
....+|.|.+++.+|+|.|+|.+.|..+.
T Consensus 87 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 115 (250)
T 2fbo_J 87 LAAPTLRLTHVHPQDGGRYWCQVAQWSIR 115 (250)
T ss_dssp TTSCCEEECSCCGGGCEEEEEEEECTTCC
T ss_pred CCcceEEEeeCChhhCeEEEEEeccCccC
Confidence 01247999999999999999999998774
No 474
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.10 E-value=1.2e-09 Score=70.60 Aligned_cols=73 Identities=19% Similarity=0.278 Sum_probs=55.3
Q ss_pred cceEeecCCeEEEEEEEccCC-----CCeEEEeeCC--Eec------------cCCCCcEEEecCCEEEEEEccCCCCCC
Q psy16859 88 TMMSVALGEDISFSFRLAGSP-----KPKVTWMKGI--KDI------------TTSSRTMTETVNDYVRLTLKRATDDEN 148 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p-----~~~~~W~~~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 148 (168)
..+.+.+|+.++|.|.+.+.+ .+.+.|++++ ..+ ....++.........+|.|.+++.+|+
T Consensus 42 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 121 (252)
T 3bkj_L 42 LSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDL 121 (252)
T ss_dssp SEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred ceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccC
Confidence 467789999999999999877 5789999843 111 012344444444556899999999999
Q ss_pred eeEEEEEEcCCc
Q psy16859 149 GTYFIVARNIYG 160 (168)
Q Consensus 149 g~y~C~~~n~~g 160 (168)
|.|.|.+.|..+
T Consensus 122 G~Y~C~~~~~~~ 133 (252)
T 3bkj_L 122 GVYYCFQASLVP 133 (252)
T ss_dssp EEEEEEECSBSS
T ss_pred EEEEEEEEcCCc
Confidence 999999999755
No 475
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.10 E-value=5.8e-10 Score=70.00 Aligned_cols=70 Identities=17% Similarity=0.153 Sum_probs=54.2
Q ss_pred ceEeecCCeEEEEEEEccCCCCeEEEeeC--CEecc------------CCCCcEEEecCCEEEEEEccCCCCCCeeEEEE
Q psy16859 89 MMSVALGEDISFSFRLAGSPKPKVTWMKG--IKDIT------------TSSRTMTETVNDYVRLTLKRATDDENGTYFIV 154 (168)
Q Consensus 89 ~~~~~~g~~~~l~C~~~~~p~~~~~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 154 (168)
.+.+.+|+.+.|.|.+. +.+.+.|+++ +..+. ...++.........+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 56788999999999998 8889999983 22111 12344444445567899999999999999999
Q ss_pred EEcCCc
Q psy16859 155 ARNIYG 160 (168)
Q Consensus 155 ~~n~~g 160 (168)
+.|..|
T Consensus 87 ~~~~~~ 92 (211)
T 3tv3_L 87 SLVGNW 92 (211)
T ss_dssp EEETTT
T ss_pred EecCCC
Confidence 999877
No 476
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.09 E-value=5.4e-10 Score=69.05 Aligned_cols=78 Identities=8% Similarity=-0.009 Sum_probs=56.6
Q ss_pred CCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 79 PAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
+|.+...|. . .+.+|+.++|.|.+.+ +.+.+.|++++..+...... .........|.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~P~i~~~p~-~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 79 (188)
T 1oll_A 4 KPFIWAEPH-F-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIYRVG 79 (188)
T ss_dssp CCEEEEESC-S-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCEEEeecC-C-cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccc-cCCCcceeEEEeCcCCcccCeEEEEEecCC
Confidence 455666664 3 6889999999999875 45789999998765421100 011234568999999999999999999886
Q ss_pred Cc
Q psy16859 159 YG 160 (168)
Q Consensus 159 ~g 160 (168)
.|
T Consensus 80 ~~ 81 (188)
T 1oll_A 80 EL 81 (188)
T ss_dssp TE
T ss_pred CC
Confidence 54
No 477
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.09 E-value=1.4e-09 Score=69.83 Aligned_cols=73 Identities=12% Similarity=0.187 Sum_probs=54.1
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEee----------------CCEeccCC---CCcEEEe-cCCEEEEEEccCCCCC
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMK----------------GIKDITTS---SRTMTET-VNDYVRLTLKRATDDE 147 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~----------------~~~~~~~~---~~~~~~~-~~~~~~l~i~~~~~~d 147 (168)
..+.+.+|+.+.|.|.+.+.+.+.+.|++ ++...... .++.... .....+|.|.+++.+|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 88 (246)
T 4dzb_B 9 SWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPED 88 (246)
T ss_dssp SEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGG
T ss_pred cEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHH
Confidence 46788999999999999999999999998 22211111 2333222 2345689999999999
Q ss_pred CeeEEEEEEcCCc
Q psy16859 148 NGTYFIVARNIYG 160 (168)
Q Consensus 148 ~g~y~C~~~n~~g 160 (168)
+|.|.|.+.|..+
T Consensus 89 ~G~Y~C~~~~~~~ 101 (246)
T 4dzb_B 89 SSFYICSARTSGD 101 (246)
T ss_dssp CEEEEEEECCSSG
T ss_pred CEEEEEEEecCCC
Confidence 9999999997643
No 478
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=99.08 E-value=2.1e-09 Score=61.01 Aligned_cols=71 Identities=15% Similarity=0.238 Sum_probs=52.1
Q ss_pred cceEeecCCeEEEEEEEccCC--CCeEEEeeCC--Ee----ccCCCCcEEEe--cCCEEEEEEccCCCCCCeeEEEEEEc
Q psy16859 88 TMMSVALGEDISFSFRLAGSP--KPKVTWMKGI--KD----ITTSSRTMTET--VNDYVRLTLKRATDDENGTYFIVARN 157 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p--~~~~~W~~~~--~~----~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~n 157 (168)
..+.+.+|++++|.|.+.+.+ .+.+.|++.. .. +....++.... .....+|.|.+++.+|+|.|.|.+.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (113)
T 1sq2_N 8 RSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYRCGLGV 87 (113)
T ss_dssp SEEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECB
T ss_pred ccEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 467788999999999998755 5679999842 21 11223444322 23457899999999999999999988
Q ss_pred C
Q psy16859 158 I 158 (168)
Q Consensus 158 ~ 158 (168)
.
T Consensus 88 ~ 88 (113)
T 1sq2_N 88 A 88 (113)
T ss_dssp T
T ss_pred C
Confidence 3
No 479
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=99.08 E-value=2.4e-09 Score=67.43 Aligned_cols=121 Identities=13% Similarity=0.134 Sum_probs=71.9
Q ss_pred CCceEEEe-cCCCEEEEEEcCCCCCCCeEEEEEEEccc---ce-ee-EEEEEEEEeccCCCcccCCCCeEEecCCcceEe
Q psy16859 19 SPRFKYIE-DSNNLHTLILSGVTAEEAGKYTCRVSNEY---GY-TE-TFARVDVINVSSGAVKHEKPAMFLTRPDTMMSV 92 (168)
Q Consensus 19 ~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~---~~-~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (168)
..||.... ......+|+|.+++.+|+|.|.|.+.+.. +. .. ....|.|..... ...|.++...+.
T Consensus 61 ~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~~~~fg~gt~L~V~~~~~----~~~P~V~~~~~~----- 131 (210)
T 2eys_A 61 NGRYTATLDADTKQSSLHITASQLSDSASYICVVSDRGSTLGRLYFGRGTQLTVWPDIQ----NPDPAVYQLRDS----- 131 (210)
T ss_dssp ETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEEESCSSTTCCEEECCCEEEEEECCCS----SCCCEEEEECCC-----
T ss_pred CCCEEEEEcCCCCEEEEEEccCCcccCceEEEEEEccCCCcccceECCCEEEEEECCCC----CCCCeEEecCCC-----
Confidence 35676653 23567899999999999999999998732 11 11 234677754211 012223333221
Q ss_pred ecCCeEEEEEEEccCCCC-eEEEeeCCEeccCCCCcEEEecCCEEEEEEccCCCCCCeeEEEEEEcCCc
Q psy16859 93 ALGEDISFSFRLAGSPKP-KVTWMKGIKDITTSSRTMTETVNDYVRLTLKRATDDENGTYFIVARNIYG 160 (168)
Q Consensus 93 ~~g~~~~l~C~~~~~p~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~~g 160 (168)
...++|.|.+.+..+. .+.+.. ...... .....|.+..+...+.|.|.|.+.|.++
T Consensus 132 --~~~~tl~Cl~~gf~P~~~v~~~~--------~~~~~~--t~~~~l~~~~~~~~~~~~~~w~~~~~~~ 188 (210)
T 2eys_A 132 --KSSDKSVCLFTDFDSQTNVSQSK--------DSDVYI--TDKCVLDMRSMDFKSNSAVAWSNKSDFA 188 (210)
T ss_dssp --SSSSCEEEEEESCCTTCCCCCCS--------STTEEE--CCCEEEEETTTTEEEEEEEEEECSTTCC
T ss_pred --CCCceEEEEcccccCCcEecccc--------CcceEc--cCchhcchhcccccccchhhccCCCceE
Confidence 1268899999985443 331111 111111 1223677888888889999999888654
No 480
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=99.08 E-value=1.6e-09 Score=61.51 Aligned_cols=71 Identities=20% Similarity=0.284 Sum_probs=52.1
Q ss_pred cceEeecCCeEEEEEEEccCC-----CCeEEEeeCC--E---ecc---------CCCCcEEEecCCEEEEEEccCCCCCC
Q psy16859 88 TMMSVALGEDISFSFRLAGSP-----KPKVTWMKGI--K---DIT---------TSSRTMTETVNDYVRLTLKRATDDEN 148 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p-----~~~~~W~~~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~ 148 (168)
..+.+.+|+.++|.|.+.+.+ .+.+.|++.. . .+. ...++.........+|.|.+++.+|+
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds 88 (113)
T 1dlf_L 9 LSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDL 88 (113)
T ss_dssp SEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred CEEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEEEEECCCChHHC
Confidence 467889999999999998755 3679999732 1 110 12344443344556899999999999
Q ss_pred eeEEEEEEcC
Q psy16859 149 GTYFIVARNI 158 (168)
Q Consensus 149 g~y~C~~~n~ 158 (168)
|.|.|.+.+.
T Consensus 89 G~Y~C~~~~~ 98 (113)
T 1dlf_L 89 GVYFCSQSTH 98 (113)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEEecC
Confidence 9999999875
No 481
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=99.08 E-value=4.3e-10 Score=63.49 Aligned_cols=74 Identities=16% Similarity=0.166 Sum_probs=51.2
Q ss_pred ceEeecCCeEEEEEEEccCCCC-----eEEEeeCCEe-c---cC------------CCCcEEEecCCEEEEEEccCCCCC
Q psy16859 89 MMSVALGEDISFSFRLAGSPKP-----KVTWMKGIKD-I---TT------------SSRTMTETVNDYVRLTLKRATDDE 147 (168)
Q Consensus 89 ~~~~~~g~~~~l~C~~~~~p~~-----~~~W~~~~~~-~---~~------------~~~~~~~~~~~~~~l~i~~~~~~d 147 (168)
.+.+..|+++.|.|.+.+.|.+ .+.|++.+.. + .. ..+... ..+..+|.|.+++.+|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~sL~I~~v~~~D 80 (110)
T 1ncn_A 3 KIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSF--DSDSWTLRLHNLQIKD 80 (110)
T ss_dssp EEEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEE--ETTTTEEEECSCCGGG
T ss_pred EEEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEE--ECCCEEEEEcCCChHH
Confidence 3567899999999998765533 3999986531 1 00 011111 1223589999999999
Q ss_pred CeeEEEEEEcCCceeeE
Q psy16859 148 NGTYFIVARNIYGSDRA 164 (168)
Q Consensus 148 ~g~y~C~~~n~~g~~~~ 164 (168)
+|.|.|.+.+..+....
T Consensus 81 ~G~Y~C~v~~~~~~~~~ 97 (110)
T 1ncn_A 81 KGLYQCIIHHKKPTGMI 97 (110)
T ss_dssp CEEEEEEEEEECSSSEE
T ss_pred CEEEEEEEEcCCCCceE
Confidence 99999999998766543
No 482
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=99.08 E-value=2.5e-09 Score=63.42 Aligned_cols=71 Identities=17% Similarity=0.259 Sum_probs=53.6
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC-----Eecc---------CCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI-----KDIT---------TSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~-----~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+.+|++++|.|.+.+.+.+.+.|++.. ..+. ...++.........+|.|.+++.+|+|.|.|
T Consensus 24 ~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~~DsG~Y~C 103 (146)
T 2yc1_B 24 ATLSVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEPEDFAIYYC 103 (146)
T ss_dssp SEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEE
T ss_pred CEEEEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCHHHCEEEEE
Confidence 4678899999999999987777789999843 1111 1234444434445789999999999999999
Q ss_pred EEEcC
Q psy16859 154 VARNI 158 (168)
Q Consensus 154 ~~~n~ 158 (168)
.+.+.
T Consensus 104 ~~~~~ 108 (146)
T 2yc1_B 104 QQYRY 108 (146)
T ss_dssp EECSS
T ss_pred EEecC
Confidence 99875
No 483
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.07 E-value=1.8e-09 Score=70.73 Aligned_cols=78 Identities=15% Similarity=0.272 Sum_probs=58.3
Q ss_pred EEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCE-----ecc---------CCCCcEEEecCCEEEEEEccCCCCC
Q psy16859 82 FLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIK-----DIT---------TSSRTMTETVNDYVRLTLKRATDDE 147 (168)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~-----~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d 147 (168)
+...| ..+.+.+|+.++|.|.+.+.|.+.+.|+++.. .+. ...++.........+|.|.+++.+|
T Consensus 15 v~~~p-~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 93 (276)
T 3auv_A 15 MTQSP-SSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPED 93 (276)
T ss_dssp EEEEC-SEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred EEeCC-CeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhh
Confidence 34444 56788999999999999998889999997431 110 1234444444455689999999999
Q ss_pred CeeEEEEEEcCCc
Q psy16859 148 NGTYFIVARNIYG 160 (168)
Q Consensus 148 ~g~y~C~~~n~~g 160 (168)
+|.|.|.+.|..+
T Consensus 94 sG~Y~C~~~n~~~ 106 (276)
T 3auv_A 94 FATYYCQQHYTTP 106 (276)
T ss_dssp CEEEEEEECSSSS
T ss_pred CEEEEEEEecCCc
Confidence 9999999999754
No 484
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.07 E-value=4.5e-10 Score=70.25 Aligned_cols=61 Identities=25% Similarity=0.529 Sum_probs=49.1
Q ss_pred CceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeE-EEEEEEE
Q psy16859 3 KPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTET-FARVDVI 67 (168)
Q Consensus 3 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~ 67 (168)
+|.+.|++++..+. ...++..... +. +|.|.+++.+|+|.|+|.+.|..|...+ .+.|.|.
T Consensus 138 pp~i~W~~~g~~l~-~~~~~~~~~~-~~--~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 138 GANIQWLFNSQSLQ-LTERMTLSQN-NS--ILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp TCEEEEEETTEECC-CCSSEEEETT-TT--EEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred CCceEEEECCEeCC-CCCCeEEcCC-CC--EEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence 48999999999984 4456665544 33 7999999999999999999999988765 5777764
No 485
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.06 E-value=1.6e-09 Score=70.20 Aligned_cols=73 Identities=12% Similarity=0.217 Sum_probs=54.8
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC--Ee---c----------cCCCCcEEE--ecCCEEEEEEccCCCCCCee
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI--KD---I----------TTSSRTMTE--TVNDYVRLTLKRATDDENGT 150 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~~---~----------~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~ 150 (168)
..+.+.+|+.++|.|.+.+.|.+.+.|++.. .. + ....++... ......+|.|.+++.+|+|.
T Consensus 11 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~ 90 (256)
T 3tf7_C 11 ARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAV 90 (256)
T ss_dssp SEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSE
T ss_pred ceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEE
Confidence 5678899999999999999899999999732 11 0 012233331 22345789999999999999
Q ss_pred EEEEEEcCCc
Q psy16859 151 YFIVARNIYG 160 (168)
Q Consensus 151 y~C~~~n~~g 160 (168)
|.|.+.|..+
T Consensus 91 Y~C~~~~~~~ 100 (256)
T 3tf7_C 91 YFCAVSAKGT 100 (256)
T ss_dssp EEEEEECTTC
T ss_pred EEEEEecCCC
Confidence 9999999754
No 486
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.06 E-value=3.7e-10 Score=70.77 Aligned_cols=79 Identities=16% Similarity=0.214 Sum_probs=56.4
Q ss_pred cceEeecCCeEEEEEEEccCC----CCeEEEee----------------CCEeccC-----CCCcEEEe---cCCEEEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSP----KPKVTWMK----------------GIKDITT-----SSRTMTET---VNDYVRLT 139 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p----~~~~~W~~----------------~~~~~~~-----~~~~~~~~---~~~~~~l~ 139 (168)
..+.+.+|+.+.|.|.+.+.+ .+.+.|++ ++..+.. ..+..... .....+|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 467788999999999998876 46899987 3333221 11222211 11345799
Q ss_pred EccCCCCCCeeEEEEEEcCCceeeEEE
Q psy16859 140 LKRATDDENGTYFIVARNIYGSDRAFV 166 (168)
Q Consensus 140 i~~~~~~d~g~y~C~~~n~~g~~~~~~ 166 (168)
|.+++.+|+|.|+|.+.|..|.....+
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~~~~~ 114 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVANKKF 114 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred EccCChhhCeEEEEEEEeCCCccccEE
Confidence 999999999999999999988766544
No 487
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.06 E-value=9.7e-11 Score=75.27 Aligned_cols=104 Identities=13% Similarity=0.107 Sum_probs=52.3
Q ss_pred eEEEEEEEcccceeeEEEEEEEEeccCCCcccCCCCeEEecCCcceE-eecCCeEEEEEEEccCC----CCeEEEeeCCE
Q psy16859 45 GKYTCRVSNEYGYTETFARVDVINVSSGAVKHEKPAMFLTRPDTMMS-VALGEDISFSFRLAGSP----KPKVTWMKGIK 119 (168)
Q Consensus 45 G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~l~C~~~~~p----~~~~~W~~~~~ 119 (168)
|.|.|.+.+..+. ......+ ..|..++..|. ... +..|+.+.|.|.+.|.. ...+.|++++.
T Consensus 1 ~~~~~~~~~~~~~--c~~~~~~----------~~P~v~i~~ps-~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~ 67 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CPAPELL----------GGPSVFLFPPK-PKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGV 67 (240)
T ss_dssp ----------------------------------CEEEEECCC-HHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTE
T ss_pred CceeeeeeecCCC--CCccccC----------CCCEEEEECcC-hHHhcccCCCcEEEEEEeccccCCCccEEEEEECCc
Confidence 7899999876443 1111111 23445555553 434 55699999999999853 34799999998
Q ss_pred eccCCCCcE--EEecCC---EEEEEEccCCCCCCeeEEEEEEcCCce
Q psy16859 120 DITTSSRTM--TETVND---YVRLTLKRATDDENGTYFIVARNIYGS 161 (168)
Q Consensus 120 ~~~~~~~~~--~~~~~~---~~~l~i~~~~~~d~g~y~C~~~n~~g~ 161 (168)
.+....... ....+. .+.|.|.....+|.|.|+|.|.|..+.
T Consensus 68 ~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~ 114 (240)
T 4acp_A 68 EVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALP 114 (240)
T ss_dssp EECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC---
T ss_pred ccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCC
Confidence 775432111 001111 146777777777899999999998763
No 488
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.06 E-value=1.2e-09 Score=68.16 Aligned_cols=78 Identities=14% Similarity=0.018 Sum_probs=55.7
Q ss_pred CCCeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCc-EEEecCCEEEEEEccCCCCCCeeEEEEEE
Q psy16859 78 KPAMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRT-MTETVNDYVRLTLKRATDDENGTYFIVAR 156 (168)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 156 (168)
.+|.+...|. ..+.+|+.++|.|.+.+ +.+.+.|++++..+...... ..........|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~P~i~~~p~--~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~ 83 (201)
T 1nkr_A 7 RKPSLLAHPG--PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGS 83 (201)
T ss_dssp CCCEEEEESC--SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEEEcC--CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEe
Confidence 3555666663 56889999999999974 77899999988654321100 01111234689999999999999999998
Q ss_pred cC
Q psy16859 157 NI 158 (168)
Q Consensus 157 n~ 158 (168)
|.
T Consensus 84 ~~ 85 (201)
T 1nkr_A 84 VT 85 (201)
T ss_dssp BT
T ss_pred cC
Confidence 64
No 489
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.06 E-value=7.4e-11 Score=74.05 Aligned_cols=65 Identities=17% Similarity=0.102 Sum_probs=45.0
Q ss_pred CCCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceeeEEEEEEE
Q psy16859 1 YVKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTETFARVDV 66 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 66 (168)
+|+|.|.|++++..+.. .............+.|.|.++..+|+|.|+|.+.|..|.....+.+.|
T Consensus 145 ~p~p~i~W~~~~~~~~~-~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 145 SPAPSVTWDTEVKGTTS-SRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp BSCCEEEEEESSCCEEE-EEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred CcCceEEEEECCccccc-CceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 58899999999876632 111111000012347999999999999999999999887766555554
No 490
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.05 E-value=2.4e-09 Score=60.70 Aligned_cols=79 Identities=14% Similarity=0.119 Sum_probs=54.2
Q ss_pred cceEeecCCeEEEEEEEccCCC-CeEEEeeCCEe-----c-c--------CCCCcEEEe--cCCEEEEEEccCCCCCCee
Q psy16859 88 TMMSVALGEDISFSFRLAGSPK-PKVTWMKGIKD-----I-T--------TSSRTMTET--VNDYVRLTLKRATDDENGT 150 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~-~~~~W~~~~~~-----~-~--------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~ 150 (168)
..+.+.+|++++|.|...+... ..+.|++.... + . ...++.... .....+|.|.+++.+|+|.
T Consensus 9 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~DsG~ 88 (113)
T 1zox_A 9 EEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDAGI 88 (113)
T ss_dssp SEEEEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CEEEEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHCEE
Confidence 4678899999999999976443 35999985421 1 0 012333322 2335689999999999999
Q ss_pred EEEEEEcCCceeeEEE
Q psy16859 151 YFIVARNIYGSDRAFV 166 (168)
Q Consensus 151 y~C~~~n~~g~~~~~~ 166 (168)
|.|.+.+........+
T Consensus 89 Y~C~v~~~~~~~~~~v 104 (113)
T 1zox_A 89 YWCGITKGGLDPMFKV 104 (113)
T ss_dssp EEEEECCSSSCCEEEE
T ss_pred EEEeeEcCCCCccEEE
Confidence 9999998754444433
No 491
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=99.05 E-value=2.5e-10 Score=65.06 Aligned_cols=73 Identities=16% Similarity=0.191 Sum_probs=50.1
Q ss_pred cceEeecCCeEEEEEEEcc-CCCCeEEEeeCCEe--------cc---------CCCCcEEE--ecCCEEEEEEccCCCCC
Q psy16859 88 TMMSVALGEDISFSFRLAG-SPKPKVTWMKGIKD--------IT---------TSSRTMTE--TVNDYVRLTLKRATDDE 147 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~-~p~~~~~W~~~~~~--------~~---------~~~~~~~~--~~~~~~~l~i~~~~~~d 147 (168)
..+.+.+|+.++|.|.... .....+.|++.... +. ...++... ......+|.|.+++.+|
T Consensus 5 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D 84 (116)
T 2or8_A 5 VEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESD 84 (116)
T ss_dssp EEEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGG
T ss_pred ceEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCccc
Confidence 4677889999999999865 33557999986521 00 01112111 01123579999999999
Q ss_pred CeeEEEEEEcCCc
Q psy16859 148 NGTYFIVARNIYG 160 (168)
Q Consensus 148 ~g~y~C~~~n~~g 160 (168)
+|.|.|.+.+..+
T Consensus 85 sG~Y~C~v~~~~~ 97 (116)
T 2or8_A 85 SGLYCCRVEIPGW 97 (116)
T ss_dssp CEEEEEEECCSST
T ss_pred CEEEEEEEEcCCc
Confidence 9999999998754
No 492
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=99.05 E-value=9.4e-10 Score=64.30 Aligned_cols=71 Identities=17% Similarity=0.294 Sum_probs=50.0
Q ss_pred cceEeecCCeEEEEEEEcc---CCCCeEEEeeCCEecc----------------------------CC--CCcEEEecCC
Q psy16859 88 TMMSVALGEDISFSFRLAG---SPKPKVTWMKGIKDIT----------------------------TS--SRTMTETVND 134 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~---~p~~~~~W~~~~~~~~----------------------------~~--~~~~~~~~~~ 134 (168)
..+.+..|++++|.|.+.. .+.+.+.|++...... .. .++.... ..
T Consensus 12 ~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~-~~ 90 (135)
T 1xt5_A 12 TEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN-LA 90 (135)
T ss_dssp SEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESC-TT
T ss_pred ceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEec-CC
Confidence 5677889999999999753 5677899998543210 00 1221111 12
Q ss_pred EEEEEEccCCCCCCeeEEEEEEcCC
Q psy16859 135 YVRLTLKRATDDENGTYFIVARNIY 159 (168)
Q Consensus 135 ~~~l~i~~~~~~d~g~y~C~~~n~~ 159 (168)
..+|.|.+++.+|+|.|.|.+.|..
T Consensus 91 ~~sL~I~~v~~~D~G~Y~C~v~~~~ 115 (135)
T 1xt5_A 91 APTLRLTHVHPQDGGRYWCQVAQWS 115 (135)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECSS
T ss_pred CCeEEECCCChhhCcEEEEEEEcCC
Confidence 3579999999999999999999853
No 493
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.04 E-value=7.7e-10 Score=64.94 Aligned_cols=58 Identities=21% Similarity=0.344 Sum_probs=42.7
Q ss_pred CCCceEEEEECCEecCCC---------CCceEEEec--CCCEEEEEEcCCCCCCCeEEEEEEEccccee
Q psy16859 1 YVKPEVIWLRGNTPLPKS---------SPRFKYIED--SNNLHTLILSGVTAEEAGKYTCRVSNEYGYT 58 (168)
Q Consensus 1 ~p~p~v~W~~~~~~~~~~---------~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 58 (168)
+|.|.+.|++++..+... ..++..... .....+|.|.+++.+|+|.|+|.+.|..|..
T Consensus 48 ~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 48 SPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp SSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGCEEEEEEEECCTTSS
T ss_pred ecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcccCEEEEEEEEecCCcc
Confidence 589999999988765321 124443321 1235689999999999999999999988775
No 494
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.04 E-value=8e-10 Score=69.41 Aligned_cols=70 Identities=21% Similarity=0.338 Sum_probs=53.8
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeC--CEecc------------CCCCcEEEecCCEEEEEEccCCCCCCeeEEE
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKG--IKDIT------------TSSRTMTETVNDYVRLTLKRATDDENGTYFI 153 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 153 (168)
..+.+..|+.+.|.|.+.+.|.+.+.|+++ +..+. ...++.........+|.|.+++.+|+|.|+|
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 86 (212)
T 1nfd_E 7 SSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYC 86 (212)
T ss_dssp SEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEE
T ss_pred CeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEE
Confidence 467789999999999998888788999974 22211 1234444444456789999999999999999
Q ss_pred EEEc
Q psy16859 154 VARN 157 (168)
Q Consensus 154 ~~~n 157 (168)
.+.|
T Consensus 87 ~~~n 90 (212)
T 1nfd_E 87 LSSY 90 (212)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9997
No 495
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.04 E-value=1.7e-09 Score=69.53 Aligned_cols=73 Identities=16% Similarity=0.314 Sum_probs=55.1
Q ss_pred cceEeecCCeEEEEEEEccCC-----CCeEEEeeCC--Ee---cc---------CCCCcEEEecCCEEEEEEccCCCCCC
Q psy16859 88 TMMSVALGEDISFSFRLAGSP-----KPKVTWMKGI--KD---IT---------TSSRTMTETVNDYVRLTLKRATDDEN 148 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p-----~~~~~W~~~~--~~---~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~ 148 (168)
..+.+.+|+.++|.|.+.+.| .+.+.|++.. .. +. ...++.........+|.|.+++.+|+
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 88 (247)
T 1svz_A 9 LYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDL 88 (247)
T ss_dssp SEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHC
Confidence 567889999999999999877 5789999832 11 10 12344444444557899999999999
Q ss_pred eeEEEEEEcCCc
Q psy16859 149 GTYFIVARNIYG 160 (168)
Q Consensus 149 g~y~C~~~n~~g 160 (168)
|.|.|.+.|..+
T Consensus 89 G~Y~C~~~n~~~ 100 (247)
T 1svz_A 89 GIYYCFQGSHFP 100 (247)
T ss_dssp EEEEEEECSSSS
T ss_pred EEEEEEEccCCc
Confidence 999999999754
No 496
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.03 E-value=8.6e-08 Score=63.53 Aligned_cols=132 Identities=11% Similarity=0.125 Sum_probs=74.7
Q ss_pred CCceEEEEECCEecCCCCCceEEEecCCCEEEEEEcCCCCCCCeEEEEEEEcccceee--EEEEEEEEeccCCCcccCCC
Q psy16859 2 VKPEVIWLRGNTPLPKSSPRFKYIEDSNNLHTLILSGVTAEEAGKYTCRVSNEYGYTE--TFARVDVINVSSGAVKHEKP 79 (168)
Q Consensus 2 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~ 79 (168)
|.|.|.|++++..|.. .++.+... ...+|+|.++...| |.|+|.+.+...... ..+.+.+..++
T Consensus 39 p~p~i~W~~~g~~i~~--~~~~~~~~--~~~~L~i~~~~~~~-g~Y~C~a~~~g~~~~~~~~~~l~v~~~P--------- 104 (303)
T 1i1r_A 39 NANYIVWKTNHFTIPK--EQYTIINR--TASSVTFTDIASLN-IQLTCNILTFGQLEQNVYGITIISGLPP--------- 104 (303)
T ss_dssp CGGGEEEEETTEECCG--GGCEEEET--TEEEEEECSCCCSE-EEEEEEEEETTTEEEEEEEEEEEEECCC---------
T ss_pred ChhheEEEECCEECCh--hheeeeCC--cEEEEEEcCcCCCc-eEEEEecccCCCcceEEEEEEEeccCCC---------
Confidence 7799999999998842 35554433 35689999999885 999999977422221 22333332211
Q ss_pred CeEEecCCcceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCCCcEEEe-------------cCCEEEEEEccC-CC
Q psy16859 80 AMFLTRPDTMMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSSRTMTET-------------VNDYVRLTLKRA-TD 145 (168)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~-------------~~~~~~l~i~~~-~~ 145 (168)
+....|.|...+.....+.|......-. ...+.+.. ......+.+..+ ..
T Consensus 105 ---------------~~P~~l~~~~~~~~~v~l~W~~~~~~~~-~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~p 168 (303)
T 1i1r_A 105 ---------------EKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVY 168 (303)
T ss_dssp ---------------CCCEEEEEEEETTSCCEEEEECCSCCSS-CCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCT
T ss_pred ---------------CCCeeeEEEECCCCcEEEEccCCCCCCC-CcCEEEEEEecCCCCccCCCcCCCceEEEECCcCcc
Confidence 1223344555444445566653211100 00111100 111135667777 66
Q ss_pred CCCeeEEEEEEcCCceee
Q psy16859 146 DENGTYFIVARNIYGSDR 163 (168)
Q Consensus 146 ~d~g~y~C~~~n~~g~~~ 163 (168)
.....|++.|.|..|...
T Consensus 169 ~t~Y~f~V~A~N~~G~~~ 186 (303)
T 1i1r_A 169 FVNIEVWVEAENALGKVT 186 (303)
T ss_dssp TSCEEEEEEEEETTEEEE
T ss_pred cccEEEEEEEEcCCCCcc
Confidence 667788899999998763
No 497
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=99.03 E-value=1.2e-09 Score=61.55 Aligned_cols=71 Identities=14% Similarity=0.253 Sum_probs=51.6
Q ss_pred cceEeecCCeEEEEEE-EccCC-CCeEEEeeCCEecc------------CCCCcEEE--ecCCEEEEEEccCCCCCCeeE
Q psy16859 88 TMMSVALGEDISFSFR-LAGSP-KPKVTWMKGIKDIT------------TSSRTMTE--TVNDYVRLTLKRATDDENGTY 151 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~-~~~~p-~~~~~W~~~~~~~~------------~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y 151 (168)
..+.+.+|++++|.|. ..+.+ .+.+.|++...... ...++... ......+|.|.+++.+|+|.|
T Consensus 8 ~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y 87 (109)
T 1pew_A 8 HSVSESPGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADY 87 (109)
T ss_dssp SEEEECTTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred CCEEEcCCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEEE
Confidence 4678899999999999 76654 46799998652110 12344433 233457899999999999999
Q ss_pred EEEEEcC
Q psy16859 152 FIVARNI 158 (168)
Q Consensus 152 ~C~~~n~ 158 (168)
.|.+.+.
T Consensus 88 ~C~~~~~ 94 (109)
T 1pew_A 88 YCQSYDA 94 (109)
T ss_dssp EEEEEET
T ss_pred EEEEEeC
Confidence 9999875
No 498
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=99.03 E-value=2.6e-09 Score=60.26 Aligned_cols=72 Identities=15% Similarity=0.237 Sum_probs=51.2
Q ss_pred cceEeecCCeEEEEEEEccCC-CCeEEEeeCCEe--cc-----------CCCCcEEEe--cCCEEEEEEccCCCCCCeeE
Q psy16859 88 TMMSVALGEDISFSFRLAGSP-KPKVTWMKGIKD--IT-----------TSSRTMTET--VNDYVRLTLKRATDDENGTY 151 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p-~~~~~W~~~~~~--~~-----------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y 151 (168)
..+.+.+|++++|.|...+.. ...+.|++.... .. ...++.... .....+|.|.+++.+|+|.|
T Consensus 4 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y 83 (110)
T 2q87_A 4 RTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTY 83 (110)
T ss_dssp EEEEECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEEE
T ss_pred cEEEEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEEE
Confidence 356788999999999987643 467999985321 10 112333321 22346899999999999999
Q ss_pred EEEEEcCC
Q psy16859 152 FIVARNIY 159 (168)
Q Consensus 152 ~C~~~n~~ 159 (168)
.|.+.+..
T Consensus 84 ~C~~~~~~ 91 (110)
T 2q87_A 84 WCGVDTPW 91 (110)
T ss_dssp EEEEECTT
T ss_pred EEEEecCc
Confidence 99999985
No 499
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.03 E-value=5.7e-09 Score=67.00 Aligned_cols=70 Identities=13% Similarity=0.305 Sum_probs=52.8
Q ss_pred cceEeecCCeEEEEEEEccCCCCeEEEeeCC--Eec--------------cCCCCcEEEe-cCCEEEEEEccCCCCCCee
Q psy16859 88 TMMSVALGEDISFSFRLAGSPKPKVTWMKGI--KDI--------------TTSSRTMTET-VNDYVRLTLKRATDDENGT 150 (168)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~~~--------------~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~ 150 (168)
..+.+.+|+.+.|.|.+.+.+.+.+.|++.. ... ....++.... .....+|.|.+++.+|+|.
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~ 88 (245)
T 3nfj_J 9 ATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGF 88 (245)
T ss_dssp SEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEE
T ss_pred ceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEE
Confidence 5678899999999999999899999999821 100 0112333322 2345689999999999999
Q ss_pred EEEEEEc
Q psy16859 151 YFIVARN 157 (168)
Q Consensus 151 y~C~~~n 157 (168)
|.|.+.|
T Consensus 89 Y~C~~~~ 95 (245)
T 3nfj_J 89 YLCAWSV 95 (245)
T ss_dssp EEEEEEC
T ss_pred EEEEEee
Confidence 9999999
No 500
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.03 E-value=3.9e-10 Score=68.79 Aligned_cols=78 Identities=15% Similarity=0.177 Sum_probs=55.7
Q ss_pred ceEeecCCeEEEEEEEccCCCCeEEEeeCCEeccCCC----------CcEEEecCCEEEEEEccCCCCCCeeEEEEEEcC
Q psy16859 89 MMSVALGEDISFSFRLAGSPKPKVTWMKGIKDITTSS----------RTMTETVNDYVRLTLKRATDDENGTYFIVARNI 158 (168)
Q Consensus 89 ~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~----------~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~n~ 158 (168)
.+.+..|+.++|.|.+.+ |.+.+.|++++..+.... +.+........+|.|.+++.+|+|.|.|.+.|.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 456789999999999854 788999999876432110 001111122357999999999999999999998
Q ss_pred CceeeEEEE
Q psy16859 159 YGSDRAFVT 167 (168)
Q Consensus 159 ~g~~~~~~~ 167 (168)
.|.....+.
T Consensus 83 ~~~~~~~L~ 91 (171)
T 1ccz_A 83 TDTMKFFLY 91 (171)
T ss_dssp CSCEEEEEE
T ss_pred CCcEEEEEE
Confidence 885555443
Done!