RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16860
(139 letters)
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion,
lipidic cubic phase, lipidic, mesophase, cholesterol,
membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo
sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A*
3pds_A*
Length = 500
Score = 139 bits (352), Expect = 2e-40
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 7 NSLNYTYNINYTSTNFSNTSLFPTNSTIHIHIFPFIIKGMLMCFIIITAILGNLLVIISV 66
+++ N + + + + T + G++M I++ + GN+LVI ++
Sbjct: 6 DAMGQPGNGSAFLLAPNRSHAPDHDVTQQRDEVWVVGMGIVMSLIVLAIVFGNVLVITAI 65
Query: 67 IKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSFDVYFS 125
K +L+ +TNYF+ SLA ADL++ L V+PF A L W FG F C+ W S DV
Sbjct: 66 AKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCV 124
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G
protein-coupled receptor, GPCR, SI protein-antagonist
complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Length = 467
Score = 131 bits (330), Expect = 2e-37
Identities = 28/105 (26%), Positives = 55/105 (52%)
Query: 21 NFSNTSLFPTNSTIHIHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFV 80
+ +++S T F + ++ + + I+GN+LV++S+ +R L+ + NYF+
Sbjct: 3 DSTDSSDNSLALTSPYKTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFL 62
Query: 81 VSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSFDVYFS 125
SLA ADL++ + M + ++ W G +CD+W + D S
Sbjct: 63 FSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVS 107
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics,
PSI-2, protein structure initiative, AC technologies
center for gene to 3D structure; HET: ETQ MAL; 2.89A
{Homo sapiens}
Length = 481
Score = 131 bits (330), Expect = 3e-37
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 18 TSTNFSNTSLFPTNSTIHIHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITN 77
++ N + NST P + C +I+ + GN LV ++V+K R L+ TN
Sbjct: 15 QLSSHLNYTCGAENSTGASQARPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTN 74
Query: 78 YFVVSLAFADLLVALCVMPFNAIVSLTDE-WYFGYFMCDVWNSFDVYFS 125
Y VVSLA ADLLVA VMP+ + +T W F CDV+ + DV
Sbjct: 75 YLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMC 123
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor,
nanobody, G protein-coupled RE GPCR, signal
transduction, G protein signaling; HET: P0G; 3.20A
{Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A
Length = 514
Score = 130 bits (329), Expect = 6e-37
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 2 NNTIYNSLNYTYNINYTSTNFSNTSLFPTNSTIHIHIFPFIIKGMLMCFIIITAILGNLL 61
+ S Y N + ++ ++ + G++M I++ + GN+L
Sbjct: 144 AVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYAADEVWV-VGMGIVMSLIVLAIVFGNVL 202
Query: 62 VIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSFD 121
VI ++ K +L+ +TNYF+ SLA ADL++ L V+PF A LT W FG F C+ W S D
Sbjct: 203 VITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSID 262
Query: 122 VYFS 125
V
Sbjct: 263 VLCV 266
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics,
PSI-biology, membrane protein, GPCR NET GPCR, hydrolase;
HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Length = 452
Score = 127 bits (320), Expect = 4e-36
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 42 IIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIV 101
+ +++ I + + NLLV+ +V RKL + N ++VSL+ ADL+V VMP N +
Sbjct: 9 MPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILY 68
Query: 102 SLTDEWYFGYFMCDVWNSFDVYFS 125
L +W G +C W S D S
Sbjct: 69 LLMSKWSLGRPLCLFWLSMDYVAS 92
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR,
membrane protein, LCP, mesophase, structural genomics,
PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Length = 488
Score = 121 bits (304), Expect = 2e-33
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 21 NFSNTSLFPTNSTIHIHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFV 80
++ + I + + I + AILGN+LV +V + L+ +TNYFV
Sbjct: 1 DYKDDDDAMGQPVGAPPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFV 60
Query: 81 VSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSFDVYFSQ 126
VSLA AD+ V + +PF +S + C F + +Q
Sbjct: 61 VSLAAADIAVGVLAIPFAITIST--GFCAACHGCLFIACFVLVLTQ 104
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR
BETA1-adrenoceptor, stabilising mutat biased agonist;
HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A*
2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A*
2ycx_A* 2ycy_A* 2ycz_A*
Length = 315
Score = 117 bits (296), Expect = 3e-33
Identities = 31/85 (36%), Positives = 52/85 (61%)
Query: 42 IIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIV 101
+LM +++ + GN+LVI ++ ++L+ +TN F+ SLA ADL+V L V+PF A +
Sbjct: 12 AGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATL 71
Query: 102 SLTDEWYFGYFMCDVWNSFDVYFSQ 126
+ W +G F+C++W S DV
Sbjct: 72 VVRGTWLWGSFLCELWTSLDVLCVT 96
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein
engineering, GPCR network, PSI-biology, struct genomics,
membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A
{Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A*
3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Length = 447
Score = 117 bits (294), Expect = 2e-32
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 8 SLNYTYNINYTSTNFSNTSLFPTNSTIHIHIFPFIIKGMLMCFIIITAILGNLLVIISVI 67
+L+Y + + + + P + + + I + AILGN+LV +V
Sbjct: 6 ALSYIFCLVFADYKDDDDGAPPIMGSS--------VYITVELAIAVLAILGNVLVCWAVW 57
Query: 68 KHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSFDVYFSQ 126
+ L+ +TNYFVVSLA AD+ V + +PF +S + C F + +Q
Sbjct: 58 LNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLFIACFVLVLTQ 114
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor,
lipid receptor, multiple sclerosi autoimmunity,
structural genomics, PSI-biology; HET: ML5 NAG; 2.80A
{Homo sapiens} PDB: 3v2w_A*
Length = 520
Score = 93.8 bits (232), Expect = 2e-23
Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 10/125 (8%)
Query: 2 NNTIYNSLNYTYNI-NYTSTNFSNTSLFPTNSTIHIHIFPFIIKGMLMCFIIITAILGNL 60
+++ + +NY + +Y T N S NS + ++ I IL N+
Sbjct: 31 RSSVSDYVNYDIIVRHYNYTGKLNISADKENSIK--------LTSVVFILICCFIILENI 82
Query: 61 LVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSF 120
V++++ K +K YF+ +LA +DLL + ++S + +
Sbjct: 83 FVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTAN-LLLSGATTYKLTPAQWFLREGS 141
Query: 121 DVYFS 125
Sbjct: 142 MFVAL 146
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide
receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A
2ksb_A
Length = 364
Score = 90.9 bits (226), Expect = 7e-23
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 1 MNNTIYNSLNYTYNINYTSTNFSNTSLFPTNSTIHIHIFPFIIKGMLMCFIIITAILGNL 60
M+N + + + NI STN S + F + + + I++T+++GN+
Sbjct: 1 MDNVLPVDSDLSPNI---STNTSEPNQFVQPAWQIV------LWAAAYTVIVVTSVVGNV 51
Query: 61 LVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSF 120
+V+ ++ H+++R +TNYF+V+LAFA+ +A N ++ +EWY+G F C N F
Sbjct: 52 VVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFF 111
Query: 121 DVY 123
+
Sbjct: 112 PIA 114
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR
network, structural genomics, GPCR membrane 7TM NOP ORL1
cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo
sapiens}
Length = 434
Score = 84.9 bits (210), Expect = 2e-20
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Query: 1 MNNTIYNSLNYTYNINYTSTNFSNTSLFPTNSTIHIHIFPFIIKGMLM---CFIIITAIL 57
+++ + + + T+ P +K ++ + + +L
Sbjct: 82 IDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLGAFLPLGLKVTIVGLYLAVCVGGLL 141
Query: 58 GNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVW 117
GN LV+ +++H K++ TN ++ +LA AD LV L + PF L W FG +C
Sbjct: 142 GNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTL-PFQGTDILLGFWPFGNALCKTV 200
Query: 118 NSFDVY 123
+ D Y
Sbjct: 201 IAIDYY 206
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal
protei photoreceptor, signaling protein; HET: MAN NAG
BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2
PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A*
2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A*
1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A*
...
Length = 349
Score = 84.0 bits (208), Expect = 2e-20
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 6/121 (4%)
Query: 9 LNYTYNINYTSTNFSNTSLFPTNSTIHIHIFP-----FIIKGMLMCFIIITAILGNLLVI 63
+N T N+ FSN + + + F + M +I+ N L +
Sbjct: 2 MNGTEGPNFYVP-FSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTL 60
Query: 64 ISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSFDVY 123
++H+KLR NY +++LA ADL + SL + FG C++ F
Sbjct: 61 YVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATL 120
Query: 124 F 124
Sbjct: 121 G 121
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor,
chromophore, glycoprotein, lipoprotein, membrane,
palmitate phosphorylation; HET: BOG RET PLM TWT PC1;
2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Length = 448
Score = 81.5 bits (201), Expect = 3e-19
Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 11/117 (9%)
Query: 19 STNFSNTSLFPTNSTIHIH----IFP------FIIKGMLMCFIIITAILGNLLVIISVIK 68
+ + + N +I +H F + G+ + I GN +VI K
Sbjct: 2 GRDLRDNETWWYNPSIVVHPHWREFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTK 61
Query: 69 HRKLRIITNYFVVSLAFADLLVALC-VMPFNAIVSLTDEWYFGYFMCDVWNSFDVYF 124
+ L+ N F+++LAF+D +L P I +W FG+ C V+ F
Sbjct: 62 TKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIF 118
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled
receptor, 7 transmembrane receptor, signal
protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A
{Mus musculus} PDB: 4ej4_A* 4djh_A*
Length = 464
Score = 74.3 bits (182), Expect = 1e-16
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 24 NTSLFPTNSTIHIHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSL 83
+ SL P + + I L + + + GN LV+ ++++ K++ TN ++ +L
Sbjct: 2 SHSLCPQTGSPSM--VTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNL 59
Query: 84 AFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSFDVY 123
A AD L +PF ++ L W FG +C + S D Y
Sbjct: 60 ALADALATST-LPFQSVNYLMGTWPFGNILCKIVISIDYY 98
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural
genomics, PSI-2, protein structure initiative; HET: ITD
OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A*
3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Length = 502
Score = 73.0 bits (179), Expect = 3e-16
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Query: 1 MNNTIYNSLNYTYNINYTSTNFSNTSLFPTNSTIHIHIFPFIIKGMLMCFIIITAILGNL 60
+IY S NYT + + F + IF I I +T I+GN
Sbjct: 12 EGISIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTI----YSIIFLTGIVGNG 67
Query: 61 LVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSF 120
LVI+ + +KLR +T+ + + L+ ADLL + +PF A V WYFG F+C +
Sbjct: 68 LVILVMGYQKKLRSMTDKYRLHLSVADLLFVIT-LPFWA-VDAVANWYFGNFLCKAVHVI 125
Query: 121 DVY 123
Sbjct: 126 YTV 128
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 30.8 bits (69), Expect = 0.13
Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 18/112 (16%)
Query: 24 NTSLFPTNSTIHIHIF--P--FIIKG---MLMCFII----ITAILGNLLVIISVIKH--R 70
N+ L P + I + ++ G L + A G + S I R
Sbjct: 357 NSHL-PAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSG---LDQSRIPFSER 412
Query: 71 KLRIITNYFVVSLAF-ADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSFD 121
KL+ + V+ F + LLV + +V + V+++FD
Sbjct: 413 KLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFD 464
Score = 28.9 bits (64), Expect = 0.59
Identities = 24/121 (19%), Positives = 30/121 (24%), Gaps = 50/121 (41%)
Query: 29 PTNSTIHIHIFPFIIKG-------MLMCFIIITAILGNLLVIISVIKHRKLRII------ 75
P N TIH F KG M F I I I
Sbjct: 1669 PVNLTIH---FGGE-KGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKG 1724
Query: 76 ----TNY-----FVVSLA-FADL----------------L---VALC----VMPFNAIVS 102
T + ++ A F DL L AL VM ++V
Sbjct: 1725 LLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVE 1784
Query: 103 L 103
+
Sbjct: 1785 V 1785
>2qas_A SSPB, hypothetical protein; SSPB, adaptor, CLPX, unknown function,
hydrolase activator; 2.55A {Caulobacter vibrioides} PDB:
2qaz_A
Length = 157
Score = 27.6 bits (61), Expect = 1.1
Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 63 IISVIKHR--KLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTD 105
+ V++H+ L +F V+L F +P+ A+ D
Sbjct: 72 MTIVLQHQYWDLAPGETFFSVTLKFGGQ-PKRLSVPYAALTRFYD 115
>2nys_A AGR_C_3712P; SSPB, stringent starvation protein B, NESG, ATR88,
structural genomics, PSI-2, protein structure
initiative; 2.70A {Agrobacterium tumefaciens str} SCOP:
b.136.1.2
Length = 176
Score = 26.5 bits (58), Expect = 2.6
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 63 IISVIKH--RKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTD 105
+ VI+H +++ F + L+F+D V+P+NAI D
Sbjct: 64 MTIVIQHQFWDMKVTETGFEIGLSFSDT-PEKLVIPYNAIRGFYD 107
>2r7r_A RNA-dependent RNA polymerase; viral protein, RNA-dependent RNA
polymerase, single subunit polymerase fold, fingers,
PALM, thumb; 2.60A {Simian rotavirus} PDB: 2r7q_A 2r7s_A
2r7t_A 2r7u_A 2r7v_A 2r7w_A* 2r7x_A* 2r7o_A
Length = 1095
Score = 26.3 bits (57), Expect = 4.7
Identities = 16/61 (26%), Positives = 22/61 (36%)
Query: 12 TYNINYTSTNFSNTSLFPTNSTIHIHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRK 71
+Y N S N+ LF NS + KG + I + L VI IK+
Sbjct: 991 SYVYNLLSINYGCYQLFDFNSPDLEKLIRIPFKGKIPAVTFILHLYAKLEVINYAIKNGS 1050
Query: 72 L 72
Sbjct: 1051 W 1051
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 25.2 bits (54), Expect = 9.8
Identities = 19/118 (16%), Positives = 35/118 (29%), Gaps = 38/118 (32%)
Query: 22 FSNTSLF---PTNSTIHIHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNY 78
SL P STI I ++ + L N + HR I+ +Y
Sbjct: 411 LHKYSLVEKQPKESTISIP----------SIYLELKVKLENEYAL-----HRS--IVDHY 453
Query: 79 FVVSLAFADLLVALCVMPFNAIVSLTDE---WYFGYFMC-----DVWNSFDVYFSQYR 128
++ + I D+ + G+ + + F + F +R
Sbjct: 454 --------NIPKTFD--SDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR 501
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.332 0.143 0.451
Gapped
Lambda K H
0.267 0.0689 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,182,671
Number of extensions: 118395
Number of successful extensions: 304
Number of sequences better than 10.0: 1
Number of HSP's gapped: 293
Number of HSP's successfully gapped: 55
Length of query: 139
Length of database: 6,701,793
Length adjustment: 84
Effective length of query: 55
Effective length of database: 4,356,429
Effective search space: 239603595
Effective search space used: 239603595
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 52 (23.9 bits)