Query psy16861
Match_columns 382
No_of_seqs 200 out of 2814
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 23:56:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16861.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16861hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 1E-36 3.5E-41 300.8 19.4 200 35-235 26-234 (510)
2 2rh1_A Beta-2-adrenergic recep 100.0 3.4E-33 1.1E-37 275.0 22.0 199 38-236 37-236 (500)
3 1u19_A Rhodopsin; G protein-co 100.0 9.1E-34 3.1E-38 265.4 13.1 288 35-363 32-322 (349)
4 2ks9_A Substance-P receptor; w 100.0 1.7E-32 5.9E-37 258.6 19.1 292 37-363 28-320 (364)
5 3uon_A Human M2 muscarinic ace 100.0 1.5E-32 5.2E-37 267.3 18.5 194 38-235 20-215 (467)
6 3odu_A C-X-C chemokine recepto 100.0 1.4E-32 4.8E-37 270.1 16.2 196 36-235 43-238 (502)
7 3v2y_A Sphingosine 1-phosphate 100.0 1.5E-32 5.3E-37 271.6 15.3 185 41-237 63-250 (520)
8 4ea3_A Fusion protein of nocic 100.0 1E-31 3.6E-36 259.7 19.6 290 37-365 121-410 (434)
9 4dkl_A MU-type opioid receptor 100.0 5.9E-32 2E-36 262.8 17.0 197 37-234 13-209 (464)
10 3vw7_A Proteinase-activated re 100.0 9.7E-32 3.3E-36 262.9 18.4 199 36-235 15-217 (484)
11 4amj_A Beta-1 adrenergic recep 100.0 2.6E-33 8.8E-38 258.2 4.5 292 39-365 9-301 (315)
12 2lnl_A C-X-C chemokine recepto 100.0 4.5E-31 1.5E-35 242.0 19.0 279 38-362 8-291 (296)
13 3eml_A Human adenosine A2A rec 100.0 4E-31 1.4E-35 258.6 19.7 196 37-235 17-221 (488)
14 3pbl_A D(3) dopamine receptor, 100.0 6.1E-31 2.1E-35 257.1 18.0 189 36-234 33-225 (481)
15 3rze_A Histamine H1 receptor, 100.0 2.4E-31 8.1E-36 257.8 12.2 189 42-234 9-199 (452)
16 3sn6_R Lysozyme, beta-2 adrene 100.0 2.9E-32 9.8E-37 269.3 5.5 308 36-364 177-490 (514)
17 4eiy_A Adenosine receptor A2A/ 100.0 9.3E-31 3.2E-35 253.2 14.1 198 36-236 26-232 (447)
18 2z73_A Rhodopsin; visual pigme 100.0 5.9E-30 2E-34 248.2 16.8 292 38-362 31-329 (448)
19 1hll_A Alpha-2A adrenergic rec 98.4 1E-07 3.5E-12 55.3 1.5 30 127-156 2-31 (32)
20 3sn6_R Lysozyme, beta-2 adrene 97.0 0.0053 1.8E-07 59.7 11.8 85 233-317 301-386 (514)
21 2rh1_A Beta-2-adrenergic recep 96.5 0.02 7E-07 55.3 12.2 81 232-312 158-239 (500)
22 4amj_A Beta-1 adrenergic recep 96.0 0.0024 8.3E-08 57.2 2.5 80 233-312 130-210 (315)
23 2z73_A Rhodopsin; visual pigme 95.9 0.053 1.8E-06 51.3 11.3 78 232-315 153-236 (448)
24 4grv_A Neurotensin receptor ty 95.8 0.094 3.2E-06 50.8 13.0 77 233-310 156-236 (510)
25 4eiy_A Adenosine receptor A2A/ 95.7 0.13 4.5E-06 48.3 13.1 81 233-314 148-237 (447)
26 3odu_A C-X-C chemokine recepto 95.4 0.12 4E-06 49.6 11.7 36 277-312 207-242 (502)
27 2lot_A Apelin receptor; membra 95.3 0.001 3.5E-08 44.4 -2.3 29 43-71 30-58 (64)
28 3v2y_A Sphingosine 1-phosphate 95.1 0.42 1.4E-05 46.2 14.7 70 232-310 179-250 (520)
29 3rze_A Histamine H1 receptor, 94.9 0.085 2.9E-06 49.7 8.8 76 232-311 126-203 (452)
30 3vw7_A Proteinase-activated re 94.9 0.089 3E-06 50.1 9.1 75 232-311 138-220 (484)
31 3eml_A Human adenosine A2A rec 94.8 0.13 4.5E-06 48.9 10.1 81 232-313 137-226 (488)
32 4dkl_A MU-type opioid receptor 94.8 0.07 2.4E-06 50.4 8.1 80 232-311 134-213 (464)
33 3uon_A Human M2 muscarinic ace 94.7 0.15 5E-06 48.3 10.0 76 233-312 142-219 (467)
34 4ea3_A Fusion protein of nocic 93.4 0.18 6.1E-06 47.5 7.8 70 233-309 243-319 (434)
35 3pbl_A D(3) dopamine receptor, 92.7 1 3.4E-05 42.6 12.0 69 233-311 161-229 (481)
36 1u19_A Rhodopsin; G protein-co 91.4 1.1 3.6E-05 40.3 10.0 72 234-311 157-236 (349)
37 2ks9_A Substance-P receptor; w 88.8 2.5 8.7E-05 38.1 10.3 33 277-309 194-226 (364)
38 2koe_A Human cannabinoid recep 85.6 0.045 1.5E-06 32.6 -2.5 24 339-362 12-35 (40)
39 2lnl_A C-X-C chemokine recepto 83.8 0.2 6.7E-06 44.3 -0.2 75 235-309 129-204 (296)
40 2ki9_A Cannabinoid receptor 2; 77.8 0.49 1.7E-05 26.6 0.1 25 274-298 4-28 (33)
41 2rdd_B UPF0092 membrane protei 50.3 22 0.00076 20.3 3.6 28 289-316 6-34 (37)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=1e-36 Score=300.77 Aligned_cols=200 Identities=19% Similarity=0.343 Sum_probs=163.5
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc---chhHHHHHHHHHHHHHHHHhHhHHHHHHHhc--Ccccc
Q psy16861 35 HIHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLR---IITNYFVVSLAFADLLVALCVMPFNAIVSLT--DEWYF 109 (382)
Q Consensus 35 ~~~~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~---~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~--~~~~~ 109 (382)
..+.+..++..++|.+++++|++||+++++++.+.+++| +++|+|++|||++|++++++.+|+.+..... +.|.+
T Consensus 26 ~~~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~ 105 (510)
T 4grv_A 26 NTDIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAF 105 (510)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSS
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEh
Confidence 345567788899999999999999999999999876544 7899999999999999999999998887653 57999
Q ss_pred cccchhHhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCCCcc
Q psy16861 110 GYFMCDVWNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQ 189 (382)
Q Consensus 110 ~~~~C~~~~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~ 189 (382)
|+.+|++..++..++..+|++++++||+|||++|++|++|+..++++++..+++++|++++++++|+++. +.......+
T Consensus 106 g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~-~~~~~~~~~ 184 (510)
T 4grv_A 106 GDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFT-MGLQNRSAD 184 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHH-EEEEECSSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHh-hcccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999988543 322221111
Q ss_pred cccCCCccccee----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16861 190 YRKHHPNVCIFV----VNVYYALISSSISFWIPGFVMVTMLVVNTVLLML 235 (382)
Q Consensus 190 ~~~~~~~~c~~~----~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~ 235 (382)
........|... ....|....+++.|++|+++|+++|..|.+.+..
T Consensus 185 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~ 234 (510)
T 4grv_A 185 GTHPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTV 234 (510)
T ss_dssp SCCGGGEEEEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCccccccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHH
Confidence 111112233322 3345777788889999999999999999998863
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=3.4e-33 Score=275.03 Aligned_cols=199 Identities=37% Similarity=0.681 Sum_probs=170.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhcCcccccccchhHh
Q psy16861 38 IFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVW 117 (382)
Q Consensus 38 ~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 117 (382)
....++..+++.+++++|++||+++++++.+++++|++.|+|++|||++|++.+++.+|..+...+.+.|.++...|++.
T Consensus 37 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~ 116 (500)
T 2rh1_A 37 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFW 116 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHH
Confidence 34456778899999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCC-CcccccCCCc
Q psy16861 118 NSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPD-HKQYRKHHPN 196 (382)
Q Consensus 118 ~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 196 (382)
.++..++..+|++++++||+|||++|++|++|...++++++..+++++|+++++++++|.+.+|..... ....|.....
T Consensus 117 ~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~~~~c~~~~~ 196 (500)
T 2rh1_A 117 TSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEET 196 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccccCcceeccccc
Confidence 999999999999999999999999999999999889999999999999999999997776666544322 1122332222
Q ss_pred ccceehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16861 197 VCIFVVNVYYALISSSISFWIPGFVMVTMLVVNTVLLMLS 236 (382)
Q Consensus 197 ~c~~~~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~~ 236 (382)
.|.......|....+++.|++|+++++++|..+.+.+...
T Consensus 197 ~~~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~ 236 (500)
T 2rh1_A 197 CCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQ 236 (500)
T ss_dssp CCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333455678888889999999999999999999888654
No 3
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=9.1e-34 Score=265.37 Aligned_cols=288 Identities=15% Similarity=0.209 Sum_probs=206.8
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhcCcccccccch
Q psy16861 35 HIHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMC 114 (382)
Q Consensus 35 ~~~~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~~~~~~~~~~C 114 (382)
..+.+...+..+++.+++++|++||+++++++.+++++|++.|++++|||++|++.++..+|..+.....+.|.+++..|
T Consensus 32 ~~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C 111 (349)
T 1u19_A 32 LAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGC 111 (349)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHH
Confidence 34456667888999999999999999999999999999999999999999999999998899988888888899999999
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCC--Cccccc
Q psy16861 115 DVWNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPD--HKQYRK 192 (382)
Q Consensus 115 ~~~~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~--~~~~~~ 192 (382)
++..++..++..+|++++++||+|||++|++|++|++ .+++++...++++|+++++.++|+. .++..+.. ....|.
T Consensus 112 ~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~-~~~~~~~~~~~~~~C~ 189 (349)
T 1u19_A 112 NLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPL-VGWSRYIPEGMQCSCG 189 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGG-TTSSCCEEETTTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHH-HheeeeeccCCceeec
Confidence 9999999999999999999999999999999999877 6889999999999999999998885 44433221 111222
Q ss_pred CCCcc-cceehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccCCCCcccccccCCcee
Q psy16861 193 HHPNV-CIFVVNVYYALISSSISFWIPGFVMVTMLVVNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVC 271 (382)
Q Consensus 193 ~~~~~-c~~~~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (382)
..... ........|.....++.+++|+++++++|..+.+.+. +...+.+..+......
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~---------------------~~~~~~~~~~~~~~~~ 248 (349)
T 1u19_A 190 IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVK---------------------EAAAQQQESATTQKAE 248 (349)
T ss_dssp CCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSC---------------------SCCCSSCSSSHHHHHH
T ss_pred ccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HhhhhhccchhhHHHH
Confidence 11111 1112345677788888999999999999976664331 1100000000000001
Q ss_pred eEeecchhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHhHHHhhccCCCccccccccCCCCCcccccCCCCCCCccceeee
Q psy16861 272 IFVVNVYYALISSSISFWIPGFVMVTMYYRIYKEAVRQRIALSRTSSNIVSPVIQSTSEGSAVVTVSDTPQSTPVTRNVR 351 (382)
Q Consensus 272 ~~~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~y~~~ 351 (382)
....+....++..+++||+|+.++.+.... . .. ... ...-..........++..||++|...
T Consensus 249 ~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~----------~-~~--~~~-----~~~~~~~~~~l~~~ns~~nPiiY~~~ 310 (349)
T 1u19_A 249 KEVTRMVIIMVIAFLICWLPYAGVAFYIFT----------H-QG--SDF-----GPIFMTIPAFFAKTSAVYNPVIYIMM 310 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------T-TT--SCC-----CHHHHHHHHHHGGGGGTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhee----------c-CC--ccc-----chHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 113345666778889999998876544221 0 00 000 00000011122356899999999999
Q ss_pred ccccccchhccc
Q psy16861 352 THSVTLNAKKKK 363 (382)
Q Consensus 352 ~~~~~~~~~~~~ 363 (382)
+++++++.++.-
T Consensus 311 ~~~fR~~~~~~~ 322 (349)
T 1u19_A 311 NKQFRNCMVTTL 322 (349)
T ss_dssp CHHHHHHHHHHH
T ss_pred hHHHHHHHHHHh
Confidence 999998876643
No 4
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=1.7e-32 Score=258.56 Aligned_cols=292 Identities=19% Similarity=0.337 Sum_probs=205.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhcCcccccccchhH
Q psy16861 37 HIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDV 116 (382)
Q Consensus 37 ~~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 116 (382)
+.+...+..+++.+++++|++||+++++++.+++++|++.|++++|||++|++.+++.+|..+.....+.|..++..|++
T Consensus 28 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 107 (364)
T 2ks9_A 28 PAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKF 107 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHh
Confidence 33444566888999999999999999999999999999999999999999999999889998888888899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCCCcccccCCCc
Q psy16861 117 WNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPN 196 (382)
Q Consensus 117 ~~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (382)
..++..++..+|++++++||+|||++|++|++|+ .+++++..+++++|+++++.++|+..............|.....
T Consensus 108 ~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~~ 185 (364)
T 2ks9_A 108 HNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWP 185 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCTTCSSBCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHHhhheecCCCCEEeecCC
Confidence 9999999999999999999999999999999976 58888999999999999999988754433222222223332211
Q ss_pred cc-ceehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccCCCCcccccccCCceeeEee
Q psy16861 197 VC-IFVVNVYYALISSSISFWIPGFVMVTMLVVNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIFVV 275 (382)
Q Consensus 197 ~c-~~~~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (382)
.. .......|.....++.+++|+++++++|..+.+.+..... ..+.....++ .........
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~-----------------~~~~~~~~~~-~~~~~~k~~ 247 (364)
T 2ks9_A 186 EHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEI-----------------PGDSSDRYHE-QVSAKRKVV 247 (364)
T ss_dssp CCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCC-----------------SSSSSSCSSH-HHHHHHHHH
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----------------CCCcchhhhh-hHHhhhhHH
Confidence 11 1123346777888899999999999999988865521100 0000000000 000111244
Q ss_pred cchhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHhHHHhhccCCCccccccccCCCCCcccccCCCCCCCccceeeecccc
Q psy16861 276 NVYYALISSSISFWIPGFVMVTMYYRIYKEAVRQRIALSRTSSNIVSPVIQSTSEGSAVVTVSDTPQSTPVTRNVRTHSV 355 (382)
Q Consensus 276 ~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~y~~~~~~~ 355 (382)
+....++..+++||+|+.++.+.... . ...... . ....-......-...++..||++|...++++
T Consensus 248 ~~~~~v~~~f~~~~~P~~i~~~~~~~----------~-~~~~~~--~--~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~f 312 (364)
T 2ks9_A 248 KMMIVVVCTFAICWLPFHIFFLLPYI----------N-PDLYLK--K--FIQQVYLAIMWLAMSSTMYNPIIYCCLNDRF 312 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH----------S-TTSCSS--S--CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh----------C-cccchh--H--HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 55677788899999998876554321 0 000000 0 0000000000112357889999999999999
Q ss_pred ccchhccc
Q psy16861 356 TLNAKKKK 363 (382)
Q Consensus 356 ~~~~~~~~ 363 (382)
+++.++.-
T Consensus 313 R~~~~~~~ 320 (364)
T 2ks9_A 313 RLGFKHAF 320 (364)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98877644
No 5
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=1.5e-32 Score=267.30 Aligned_cols=194 Identities=26% Similarity=0.522 Sum_probs=167.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhcCcccccccchhHh
Q psy16861 38 IFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVW 117 (382)
Q Consensus 38 ~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 117 (382)
.....+..+++.+++++|++||+++++++.++++++++.|+|++|||++|++.+++.+|..+.....+.|.++...|++.
T Consensus 20 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 99 (467)
T 3uon_A 20 TFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLW 99 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHH
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCCCcccccCCCcc
Q psy16861 118 NSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNV 197 (382)
Q Consensus 118 ~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (382)
.++..++..+|++++++||+|||++|++|++|....+.+++..+++++|++++++++|+.+. +....... ......
T Consensus 100 ~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~-~~~~~~~~---~~~~~~ 175 (467)
T 3uon_A 100 LALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILF-WQFIVGVR---TVEDGE 175 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHSCC---CCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHH-hhhccccc---CCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999988554 22111100 011122
Q ss_pred ccee--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16861 198 CIFV--VNVYYALISSSISFWIPGFVMVTMLVVNTVLLML 235 (382)
Q Consensus 198 c~~~--~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~ 235 (382)
|... ....|....+++.|++|+++++++|+.+.+.+..
T Consensus 176 C~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~ 215 (467)
T 3uon_A 176 CYIQFFSNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKS 215 (467)
T ss_dssp CCCGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTT
T ss_pred ceeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322 3456788888999999999999999999988853
No 6
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=1.4e-32 Score=270.13 Aligned_cols=196 Identities=24% Similarity=0.364 Sum_probs=165.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhcCcccccccchh
Q psy16861 36 IHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCD 115 (382)
Q Consensus 36 ~~~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~ 115 (382)
.......+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+ +.+|..+..... .|.++...|+
T Consensus 43 ~~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C~ 120 (502)
T 3odu_A 43 NANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLCK 120 (502)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhhh
Confidence 34556788899999999999999999999999999999999999999999999995 578888776655 6899999999
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCCCcccccCCC
Q psy16861 116 VWNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHP 195 (382)
Q Consensus 116 ~~~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (382)
+..++..++..+|++++++||+|||++|++|++|....+++++..+++++|++++++++|+.+............|....
T Consensus 121 ~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 200 (502)
T 3odu_A 121 AVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFY 200 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECSSSEEEEECC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccCCceEEeecC
Confidence 99999999999999999999999999999999999999999999999999999999999987654333322222232111
Q ss_pred cccceehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16861 196 NVCIFVVNVYYALISSSISFWIPGFVMVTMLVVNTVLLML 235 (382)
Q Consensus 196 ~~c~~~~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~ 235 (382)
....+...|.....++.+++|+++++++|+.+.+.+..
T Consensus 201 --~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~ 238 (502)
T 3odu_A 201 --PNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSH 238 (502)
T ss_dssp --SSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGG
T ss_pred --CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11234455777788899999999999999999988854
No 7
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.98 E-value=1.5e-32 Score=271.59 Aligned_cols=185 Identities=19% Similarity=0.315 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhcCcccccccchhHhhHH
Q psy16861 41 FIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSF 120 (382)
Q Consensus 41 ~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 120 (382)
..+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|..+.. ..+.|..+...|++..++
T Consensus 63 ~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~ 141 (520)
T 3v2y_A 63 IKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGS 141 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHH
Confidence 3678899999999999999999999999999999999999999999999999888776665 566788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCCCcccccCCCcccce
Q psy16861 121 DVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIF 200 (382)
Q Consensus 121 ~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 200 (382)
..++.++|++++++||+|||++|+ |++|...++++++..+++++|++++++++||+ +++....+ . ..|..
T Consensus 142 ~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~-~~~~~~~~-~-------~~C~~ 211 (520)
T 3v2y_A 142 MFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPI-MGWNCISA-L-------SSCST 211 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTT-TTCBCTTC-G-------GGBCS
T ss_pred HHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHH-HeeccccC-C-------Ccccc
Confidence 999999999999999999999999 99999999999999999999999999999884 55554422 1 23332
Q ss_pred eh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy16861 201 VV---NVYYALISSSISFWIPGFVMVTMLVVNTVLLMLSN 237 (382)
Q Consensus 201 ~~---~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~~~ 237 (382)
.+ ...|. ...++.|++|+++++++|..|.+.+....
T Consensus 212 ~~~~~~~~~~-~~~~~~~~lPl~ii~~~Y~~I~~~l~~~~ 250 (520)
T 3v2y_A 212 VLPLYHKHYI-LFCTTVFTLLLLSIVILYCRIYSLVRTRN 250 (520)
T ss_dssp SSTTBBHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccchHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 22 23333 44556799999999999999999887654
No 8
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.98 E-value=1e-31 Score=259.69 Aligned_cols=290 Identities=19% Similarity=0.205 Sum_probs=204.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhcCcccccccchhH
Q psy16861 37 HIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDV 116 (382)
Q Consensus 37 ~~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 116 (382)
+.....+..+++.+++++|++||+++++++.+++++|+++|++++|||++|++. ++.+|..+.....+.|..+...|++
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~ 199 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKT 199 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHH
Confidence 344557778899999999999999999999999999999999999999999998 5678999888888899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCCCcccccCCCc
Q psy16861 117 WNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPN 196 (382)
Q Consensus 117 ~~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (382)
..++..++..+|++++++||+|||++|++|++|...++++++..+++++|+++++.++|+.+.+..........|.....
T Consensus 200 ~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~c~~~~~ 279 (434)
T 4ea3_A 200 VIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIP 279 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSSCCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecCceeEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999998877665444443333332222
Q ss_pred ccceehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccCCCCcccccccCCceeeEeec
Q psy16861 197 VCIFVVNVYYALISSSISFWIPGFVMVTMLVVNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIFVVN 276 (382)
Q Consensus 197 ~c~~~~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (382)
.........|.....++.+++|+++++++|..+.+.+.-... ....++..+ .......
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~-----------------~~~~~~~~~-----~~~~~~~ 337 (434)
T 4ea3_A 280 TPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRL-----------------LSGSREKDR-----NLRRITR 337 (434)
T ss_dssp SSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSS-----------------CSSCHHHHH-----HHHHHHH
T ss_pred ChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----------------cccchhhHH-----HHhHHHH
Confidence 222233456778888999999999999999999877631110 000000000 0111445
Q ss_pred chhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHhHHHhhccCCCccccccccCCCCCcccccCCCCCCCccceeeeccccc
Q psy16861 277 VYYALISSSISFWIPGFVMVTMYYRIYKEAVRQRIALSRTSSNIVSPVIQSTSEGSAVVTVSDTPQSTPVTRNVRTHSVT 356 (382)
Q Consensus 277 ~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~y~~~~~~~~ 356 (382)
....++..+++||+|+.++.+....- ...... ....-..........++..||++|..++++++
T Consensus 338 ~~~~vv~~F~i~w~P~~i~~~~~~~~------------~~~~~~----~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR 401 (434)
T 4ea3_A 338 LVLVVVAVFVGCWTPVQVFVLAQGLG------------VQPSSE----TAVAILRFCTALGYVNSCLNPILYAFLDENFK 401 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT------------CCCCSH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc------------cCCchH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888999999998876543210 000000 00000000000123578899999999999999
Q ss_pred cchhcccch
Q psy16861 357 LNAKKKKKK 365 (382)
Q Consensus 357 ~~~~~~~~~ 365 (382)
++.++...+
T Consensus 402 ~~~~~~~~~ 410 (434)
T 4ea3_A 402 ACFRKFCCA 410 (434)
T ss_dssp HHHC-----
T ss_pred HHHHHHhCc
Confidence 988765443
No 9
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.98 E-value=5.9e-32 Score=262.82 Aligned_cols=197 Identities=21% Similarity=0.369 Sum_probs=168.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhcCcccccccchhH
Q psy16861 37 HIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDV 116 (382)
Q Consensus 37 ~~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 116 (382)
.....++..+++.+++++|++||+++++++.++++++++.|+|++|||++|++.++. +|..+.....+.|.++...|++
T Consensus 13 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~ 91 (464)
T 4dkl_A 13 SMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKI 91 (464)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhh
Confidence 345567888999999999999999999999999999999999999999999999876 9999998888999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCCCcccccCCCc
Q psy16861 117 WNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPN 196 (382)
Q Consensus 117 ~~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (382)
..++..++..+|++++++||+|||++|++|++|....+++++..+++++|++++++++|+.+.....+......|.....
T Consensus 92 ~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~~~c~~~~~ 171 (464)
T 4dkl_A 92 VISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFS 171 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETTEEECCBCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCCCceEEeecC
Confidence 99999999999999999999999999999999998889999999999999999999998876544443333333433222
Q ss_pred ccceehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16861 197 VCIFVVNVYYALISSSISFWIPGFVMVTMLVVNTVLLM 234 (382)
Q Consensus 197 ~c~~~~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~ 234 (382)
.....+...|....+++.+++|+++++++|+.+.+.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~ 209 (464)
T 4dkl_A 172 HPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLK 209 (464)
T ss_dssp SSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCC
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222355677888899999999999999999987764
No 10
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.98 E-value=9.7e-32 Score=262.92 Aligned_cols=199 Identities=18% Similarity=0.202 Sum_probs=156.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHh-cCcccccccch
Q psy16861 36 IHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSL-TDEWYFGYFMC 114 (382)
Q Consensus 36 ~~~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~-~~~~~~~~~~C 114 (382)
+......+..+++.+++++|++||+++++++.+++++++++|+|++|||++|++.++. +|+.+.... .+.|.++...|
T Consensus 15 ~~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~~~~~~~~~~~~C 93 (484)
T 3vw7_A 15 TSSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYFSGSDWQFGSELC 93 (484)
T ss_dssp TCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHHTTSCCCSCHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCcccchhHH
Confidence 3455667889999999999999999999999999999999999999999999999765 555555444 45899999999
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhccccc--CCCccccc
Q psy16861 115 DVWNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTT--PDHKQYRK 192 (382)
Q Consensus 115 ~~~~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~--~~~~~~~~ 192 (382)
++..++..++..+|++++++||+|||++|++|++|...++++++..+++++|++++++++|+.+...... ......|.
T Consensus 94 ~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~ 173 (484)
T 3vw7_A 94 RFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCH 173 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEES
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceee
Confidence 9999999999999999999999999999999999998899999999999999999999988865432211 11122232
Q ss_pred CCCccc-ceehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16861 193 HHPNVC-IFVVNVYYALISSSISFWIPGFVMVTMLVVNTVLLML 235 (382)
Q Consensus 193 ~~~~~c-~~~~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~ 235 (382)
...... .......|.....++.|++|+++++++|+.+.+.+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~ 217 (484)
T 3vw7_A 174 DVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSS 217 (484)
T ss_dssp SSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred ccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhH
Confidence 221111 1122333667778899999999999999999988753
No 11
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.97 E-value=2.6e-33 Score=258.24 Aligned_cols=292 Identities=27% Similarity=0.424 Sum_probs=215.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhcCcccccccchhHhh
Q psy16861 39 FPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWN 118 (382)
Q Consensus 39 ~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 118 (382)
.......+++.+++++|++||+++++++.+++++|++.|+++.|||++|++.++..+|..+.....+.|.+++..|++..
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 88 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWT 88 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHH
Confidence 34467788999999999999999999999999999999999999999999998888999999888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccC-CCcccccCCCcc
Q psy16861 119 SFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTP-DHKQYRKHHPNV 197 (382)
Q Consensus 119 ~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 197 (382)
++..++..+|++++++||+|||++|++|++|+...+++++..+++++|+++++.+++|.+..+.... .....|......
T Consensus 89 ~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 168 (315)
T 4amj_A 89 SLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGC 168 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCcccccccccc
Confidence 9999999999999999999999999999999888899999999999999999999888765443322 222234444444
Q ss_pred cceehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccCCCCcccccccCCceeeEeecc
Q psy16861 198 CIFVVNVYYALISSSISFWIPGFVMVTMLVVNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIFVVNV 277 (382)
Q Consensus 198 c~~~~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (382)
|.......|.....++.+++|+++++++|..+.+.+.....-. .....++..+ ..........+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~--------------~~~~~~~~~~-~~~~~~~k~~~~ 233 (315)
T 4amj_A 169 CDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKI--------------DRASKRKTSR-VMLMREHKALKT 233 (315)
T ss_dssp CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC--------------------------CH-HHHHHHHHHHHH
T ss_pred chhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------Ccccccccch-hhhhhhhhHHHH
Confidence 5555677888888899999999999999999988774322100 0000000000 000011123445
Q ss_pred hhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHhHHHhhccCCCccccccccCCCCCcccccCCCCCCCccceeeecccccc
Q psy16861 278 YYALISSSISFWIPGFVMVTMYYRIYKEAVRQRIALSRTSSNIVSPVIQSTSEGSAVVTVSDTPQSTPVTRNVRTHSVTL 357 (382)
Q Consensus 278 ~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~y~~~~~~~~~ 357 (382)
...++..+++||+|+.+..+....- ..... .........-...++..||.+|. .++++++
T Consensus 234 ~~~~~~~f~i~~~P~~i~~~~~~~~------------~~~~~-------~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~ 293 (315)
T 4amj_A 234 LGIIMGVFTLCWLPFFLVNIVNVFN------------RDLVP-------DWLFVAFNWLGYANSAMNPIIYC-RSPDFRK 293 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC------------TTSSC-------HHHHHHHHHHHHHGGGTHHHHGG-GSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc------------Cccch-------HHHHHHHHHHHHHhccccHHHHc-CcHHHHH
Confidence 6677788999999998876653210 00000 00000001112468899999999 8999998
Q ss_pred chhcccch
Q psy16861 358 NAKKKKKK 365 (382)
Q Consensus 358 ~~~~~~~~ 365 (382)
+.++.-.+
T Consensus 294 ~~~~~l~~ 301 (315)
T 4amj_A 294 AFKRLLAF 301 (315)
T ss_dssp HHHHHHC-
T ss_pred HHHHHhCC
Confidence 88765543
No 12
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.97 E-value=4.5e-31 Score=242.00 Aligned_cols=279 Identities=20% Similarity=0.292 Sum_probs=200.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhcCcccccccchhHh
Q psy16861 38 IFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVW 117 (382)
Q Consensus 38 ~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 117 (382)
.....+..+++.+++++|++||+++++++.++|++|+++|+++.|||++|++.++. +|..+.... ++|..|+..|++.
T Consensus 8 ~~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~-~p~~~~~~~-~~~~~~~~~c~~~ 85 (296)
T 2lnl_A 8 TLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALT-LPIWAASKV-NGWIFGTFLCKVV 85 (296)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHH-HHHHHHHHH-SSSCCSSHHHHHH
T ss_pred chhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHh-hhHHHhhcc-CCCccchhHHHHH
Confidence 34456777889999999999999999999999999999999999999999998764 777666555 4689999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCCCc-ccccCCCc
Q psy16861 118 NSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHK-QYRKHHPN 196 (382)
Q Consensus 118 ~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 196 (382)
.++..++..+|++++++||+|||++|++|++|+... ++++..+++++|+++++.++|+.........+.. ..+.....
T Consensus 86 ~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 164 (296)
T 2lnl_A 86 SLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQK-RHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLG 164 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCH-HHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCCS
T ss_pred hhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhh-hhhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeeeecc
Confidence 999999999999999999999999999999987754 4667778889999999999888654333222222 12222222
Q ss_pred ccceehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccCCCCcccccccCCceeeEeec
Q psy16861 197 VCIFVVNVYYALISSSISFWIPGFVMVTMLVVNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIFVVN 276 (382)
Q Consensus 197 ~c~~~~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (382)
.........+......+.+++|+.++..+|..+.+++ .+...+++ ....+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~---------------------~~~~~~~~---------~k~~~ 214 (296)
T 2lnl_A 165 NDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTL---------------------FKAHMGQK---------HRAMR 214 (296)
T ss_dssp CCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTS---------------------SSCCCHHH---------HTHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHhhhhh---------hhHHH
Confidence 2223345667788889999999999999997765332 11111110 11456
Q ss_pred chhhhhhhhhhhhHhHHHHHHHHHHHHHHHH----HhHHHhhccCCCccccccccCCCCCcccccCCCCCCCccceeeec
Q psy16861 277 VYYALISSSISFWIPGFVMVTMYYRIYKEAV----RQRIALSRTSSNIVSPVIQSTSEGSAVVTVSDTPQSTPVTRNVRT 352 (382)
Q Consensus 277 ~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~y~~~~ 352 (382)
....++..+++||+|+.++.+.+........ ........ .......-.-.|+..||.+|..++
T Consensus 215 ~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~ns~~NPiIY~~~~ 281 (296)
T 2lnl_A 215 VIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGR-------------ALDATEILGFLHSCLNPIIYAFIG 281 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTH-------------HHHHHHHHGGGGGTHHHHHHHHHC
T ss_pred HHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHHH-------------HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6788889999999999888776543110000 00000000 000001112468899999999999
Q ss_pred cccccchhcc
Q psy16861 353 HSVTLNAKKK 362 (382)
Q Consensus 353 ~~~~~~~~~~ 362 (382)
+++|++.++-
T Consensus 282 ~~fR~~~~~l 291 (296)
T 2lnl_A 282 QNFRHGFLKI 291 (296)
T ss_dssp SHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998887653
No 13
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.97 E-value=4e-31 Score=258.58 Aligned_cols=196 Identities=29% Similarity=0.421 Sum_probs=162.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhcCcccccccchhH
Q psy16861 37 HIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDV 116 (382)
Q Consensus 37 ~~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 116 (382)
......+..+++.+++++|++||+++++++.++++++++.|+|++|||++|++.+++.+|..+.... .|..+...|++
T Consensus 17 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~~~~C~~ 94 (488)
T 3eml_A 17 PIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLF 94 (488)
T ss_dssp -CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEECHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccchHHHH
Confidence 3444567889999999999999999999999999999999999999999999999999998776544 57888999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCC------Cccc
Q psy16861 117 WNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPD------HKQY 190 (382)
Q Consensus 117 ~~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~------~~~~ 190 (382)
..++..++..+|++++++||+|||++|++|++|....+++++..+++++|++++++++|+. +++..... ....
T Consensus 95 ~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~ 173 (488)
T 3eml_A 95 IACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPM-LGWNNCGQPKEGKNHSQG 173 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGG-GTCCSSCC-------CCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHH-hccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999998885 44443322 1233
Q ss_pred ccCCCcccce---ehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16861 191 RKHHPNVCIF---VVNVYYALISSSISFWIPGFVMVTMLVVNTVLLML 235 (382)
Q Consensus 191 ~~~~~~~c~~---~~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~ 235 (382)
|......|.. .....+....+++.+++|+++++++|+.+.+.+..
T Consensus 174 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~ 221 (488)
T 3eml_A 174 CGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARR 221 (488)
T ss_dssp SCTTCEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTC
T ss_pred cccccceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444434432 22344556668889999999999999999988853
No 14
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.97 E-value=6.1e-31 Score=257.07 Aligned_cols=189 Identities=39% Similarity=0.629 Sum_probs=158.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhc-Ccccccccch
Q psy16861 36 IHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLT-DEWYFGYFMC 114 (382)
Q Consensus 36 ~~~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~-~~~~~~~~~C 114 (382)
.......+..+++.+++++|++||+++++++.++++++++.|+|++|||++|++.+++.+|..+...+. +.|.++...|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C 112 (481)
T 3pbl_A 33 SQARPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICC 112 (481)
T ss_dssp --------CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchh
Confidence 334455677788999999999999999999999999999999999999999999999999988877666 6799999999
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC---CcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCCCcccc
Q psy16861 115 DVWNSFDVYFSTASILHLCCISVDRYYAIVKPLQY---PIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYR 191 (382)
Q Consensus 115 ~~~~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~---~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~ 191 (382)
++..++..++..+|++++++||+|||++|++|++| ....+.+++..+++++|++++++++|+.+ ++.....
T Consensus 113 ~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~-~~~~~~~----- 186 (481)
T 3pbl_A 113 DVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLF-GFNTTGD----- 186 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHT-TTCCCSS-----
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHh-eecccCC-----
Confidence 99999999999999999999999999999999998 56778899999999999999999998854 4433221
Q ss_pred cCCCcccceehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16861 192 KHHPNVCIFVVNVYYALISSSISFWIPGFVMVTMLVVNTVLLM 234 (382)
Q Consensus 192 ~~~~~~c~~~~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~ 234 (382)
...|.... ..|.....++.|++|+++++++|+.+.+.+.
T Consensus 187 ---~~~C~~~~-~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~ 225 (481)
T 3pbl_A 187 ---PTVCSISN-PDFVIYSSVVSFYLPFGVTVLVYARIYVVLK 225 (481)
T ss_dssp ---TTCCSCCC-HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCcccccC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22344333 3477778899999999999999999998875
No 15
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.97 E-value=2.4e-31 Score=257.82 Aligned_cols=189 Identities=25% Similarity=0.465 Sum_probs=160.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhcCcccccccchhHhhHHH
Q psy16861 42 IIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSFD 121 (382)
Q Consensus 42 ~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 121 (382)
.+..+++.+++++|++||+++++++.++++++++.|+|++|||++|++.+++.+|..+.....+.|.++...|++..++.
T Consensus 9 ~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 88 (452)
T 3rze_A 9 MPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMD 88 (452)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHHH
Confidence 45567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCCCcccccCCCcccce-
Q psy16861 122 VYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIF- 200 (382)
Q Consensus 122 ~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~- 200 (382)
.++..+|++++++||+|||++|++|++|....+++++..+++++|++++++++|.. ++........ ......|..
T Consensus 89 ~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~--~~~~~~~~~~--~~~~~~C~~~ 164 (452)
T 3rze_A 89 YVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPIL--GWNHFMQQTS--VRREDKCETD 164 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHH--CCCC---------CCSSSSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHH--HHHhcccccc--cCCCCeecCC
Confidence 99999999999999999999999999999999999999999999999999988743 3322221111 112223432
Q ss_pred -ehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16861 201 -VVNVYYALISSSISFWIPGFVMVTMLVVNTVLLM 234 (382)
Q Consensus 201 -~~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~ 234 (382)
.....|.....++.|++|+++++++|+.+.+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~ 199 (452)
T 3rze_A 165 FYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVR 199 (452)
T ss_dssp CTTCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2345577888899999999999999999998774
No 16
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.97 E-value=2.9e-32 Score=269.27 Aligned_cols=308 Identities=27% Similarity=0.410 Sum_probs=216.8
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhcCcccccccchh
Q psy16861 36 IHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCD 115 (382)
Q Consensus 36 ~~~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~ 115 (382)
..........+++.+++++|++||+++++++.+++++|++.|++++|||++|++.+++.+|..+.....+.|.++...|+
T Consensus 177 ~~~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~ 256 (514)
T 3sn6_R 177 ADEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCE 256 (514)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhh
Confidence 34455677889999999999999999999999999999999999999999999999999999999988899999999999
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCCC-cccccCC
Q psy16861 116 VWNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDH-KQYRKHH 194 (382)
Q Consensus 116 ~~~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~-~~~~~~~ 194 (382)
+..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|+++++++++|.+.++...... ...|...
T Consensus 257 ~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~ 336 (514)
T 3sn6_R 257 FWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAE 336 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeec
Confidence 999999999999999999999999999999999998889999999999999999999988877666544332 2223333
Q ss_pred CcccceehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccCCCCccc----ccc-cCCc
Q psy16861 195 PNVCIFVVNVYYALISSSISFWIPGFVMVTMLVVNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQ----YRK-HHPN 269 (382)
Q Consensus 195 ~~~c~~~~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~ 269 (382)
...|.......|....+++.+++|+++++++|..+.+.+.....-.......... .......+.++. .++ ....
T Consensus 337 ~~~~~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 415 (514)
T 3sn6_R 337 ETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHV-QNLSQVEQDGRTGHGLRRSSKFCL 415 (514)
T ss_dssp SSCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------------------------CH
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccc-cccccccccccccccccchhhhhH
Confidence 3333444567788889999999999999999999998887543311000000000 000000000000 000 0000
Q ss_pred eeeEeecchhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHhHHHhhccCCCccccccccCCCCCcccccCCCCCCCcccee
Q psy16861 270 VCIFVVNVYYALISSSISFWIPGFVMVTMYYRIYKEAVRQRIALSRTSSNIVSPVIQSTSEGSAVVTVSDTPQSTPVTRN 349 (382)
Q Consensus 270 ~~~~~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~y~ 349 (382)
...........++..+++||+|+.++.+....- ..... .........-...++..||++|.
T Consensus 416 ~~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~------------~~~~~-------~~~~~~~~~l~~~ns~~NPiIY~ 476 (514)
T 3sn6_R 416 KEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQ------------DNLIR-------KEVYILLNWIGYVNSGFNPLIYC 476 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS------------TTSSC-------HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------ccccc-------hHHHHHHHHHHHHHHhhhHHhhc
Confidence 111234456677788999999998876653220 00000 00000011122467889999999
Q ss_pred eeccccccchhcccc
Q psy16861 350 VRTHSVTLNAKKKKK 364 (382)
Q Consensus 350 ~~~~~~~~~~~~~~~ 364 (382)
.++++++..++.-.
T Consensus 477 -~~~~fR~~~~~~l~ 490 (514)
T 3sn6_R 477 -RSPDFRIAFQELLC 490 (514)
T ss_dssp -TCHHHHHHHHTTCC
T ss_pred -CCHHHHHHHHHHhC
Confidence 88888887776543
No 17
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.97 E-value=9.3e-31 Score=253.25 Aligned_cols=198 Identities=27% Similarity=0.392 Sum_probs=161.7
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhHhHHHHHHHhcCcccccccchh
Q psy16861 36 IHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCD 115 (382)
Q Consensus 36 ~~~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~ 115 (382)
.+.....+..+++.+++++|++||+++++++.++++++++.|+|++|||++|++.+++.+|..+.... .|..+...|+
T Consensus 26 ~~~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~--~~~~~~~~C~ 103 (447)
T 4eiy_A 26 PPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCL 103 (447)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHT--TCEEEHHHHH
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccccCccHHH
Confidence 34455567888999999999999999999999999999999999999999999999998998776443 5677889999
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCCC------cc
Q psy16861 116 VWNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDH------KQ 189 (382)
Q Consensus 116 ~~~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~------~~ 189 (382)
+..++..++..+|++++++||+|||++|++|++|....+++++..+++++|++++++++|+. +++...... ..
T Consensus 104 ~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~-~~~~~~~~~~~~~~~~~ 182 (447)
T 4eiy_A 104 FIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPM-LGWNNCGQPKEGKNHSQ 182 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGG-GTCSSTTSCCHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhh-heeccccccCccccccc
Confidence 99999999999999999999999999999999999889999999999999999999999884 444433221 12
Q ss_pred cccCCCccccee---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16861 190 YRKHHPNVCIFV---VNVYYALISSSISFWIPGFVMVTMLVVNTVLLMLS 236 (382)
Q Consensus 190 ~~~~~~~~c~~~---~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~~ 236 (382)
.|......|... ....+....+++.+++|+++++++|+.+.+.+...
T Consensus 183 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~ 232 (447)
T 4eiy_A 183 GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQ 232 (447)
T ss_dssp TCCTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233333333222 12334444566778999999999999999888754
No 18
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.97 E-value=5.9e-30 Score=248.25 Aligned_cols=292 Identities=18% Similarity=0.267 Sum_probs=208.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHhH-hHHHHHHHhcCcccccccchhH
Q psy16861 38 IFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCV-MPFNAIVSLTDEWYFGYFMCDV 116 (382)
Q Consensus 38 ~~~~~~~~~~~~~i~i~gi~gN~~vl~vi~~~~~l~~~~~~~i~nLai~Dll~~~~~-~p~~~~~~~~~~~~~~~~~C~~ 116 (382)
.....+..+++.+++++|++||+++++++.+++++|++.|++++|||++|++.+++. +|..+.....+.|.++...|++
T Consensus 31 ~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~ 110 (448)
T 2z73_A 31 DAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKV 110 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHH
Confidence 334567788999999999999999999999999999999999999999999998774 8888888888889999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccchhhhhhhhhHHhHHHHHHHHhhHhhcccccCCCcccccCCCc
Q psy16861 117 WNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPN 196 (382)
Q Consensus 117 ~~~~~~~~~~~s~~~l~~iaidRy~~I~~p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (382)
..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++++.+ ++.....+.. ..
T Consensus 111 ~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~-~~~~~~~~~~-----~~ 184 (448)
T 2z73_A 111 YGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIF-GWGAYTLEGV-----LC 184 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGG-TSSCEEECTT-----SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHh-ceeeeeecCC-----ce
Confidence 99999999999999999999999999999999998899999999999999999999988854 4433221111 11
Q ss_pred ccce------ehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccCCCCcccccccCCce
Q psy16861 197 VCIF------VVNVYYALISSSISFWIPGFVMVTMLVVNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNV 270 (382)
Q Consensus 197 ~c~~------~~~~~~~~~~~~~~~~~Pl~~i~~~y~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (382)
.|.. .....+.....++.+++|+++++++|..+.+.+........... ......+.+........
T Consensus 185 ~c~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~ 255 (448)
T 2z73_A 185 NCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMA---------KRLNAKELRKAQAGANA 255 (448)
T ss_dssp SEEECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHH---------TTTCCTTHHHHHHHHHH
T ss_pred eEecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------hhhhhHHHHhhhccccH
Confidence 2221 12345666777888999999999999999987764433111000 00000000000000000
Q ss_pred eeEeecchhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHhHHHhhccCCCccccccccCCCCCcccccCCCCCCCccceee
Q psy16861 271 CIFVVNVYYALISSSISFWIPGFVMVTMYYRIYKEAVRQRIALSRTSSNIVSPVIQSTSEGSAVVTVSDTPQSTPVTRNV 350 (382)
Q Consensus 271 ~~~~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~y~~ 350 (382)
.....+....++..+++||+|+.++.+++..- . ..... .............++..||++|..
T Consensus 256 ~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~------~----~~~~~--------~~~~~~~~~l~~~ns~~NPiIY~~ 317 (448)
T 2z73_A 256 EMRLAKISIVIVSQFLLSWSPYAVVALLAQFG------P----LEWVT--------PYAAQLPVMFAKASAIHNPMIYSV 317 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS------C----GGGCC--------HHHHHHHHHHHHHGGGSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC------C----cccCC--------hHHHHHHHHHHHHHHhhcchHHHH
Confidence 11134456677888899999998876654210 0 00000 000000111224678999999999
Q ss_pred eccccccchhcc
Q psy16861 351 RTHSVTLNAKKK 362 (382)
Q Consensus 351 ~~~~~~~~~~~~ 362 (382)
.+++++++.++.
T Consensus 318 ~~~~fR~~~~~~ 329 (448)
T 2z73_A 318 SHPKFREAISQT 329 (448)
T ss_dssp HCHHHHHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 999999887664
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.36 E-value=1e-07 Score=55.29 Aligned_cols=30 Identities=40% Similarity=0.869 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCcccchh
Q psy16861 127 ASILHLCCISVDRYYAIVKPLQYPIIMNQN 156 (382)
Q Consensus 127 ~s~~~l~~iaidRy~~I~~p~~~~~~~t~~ 156 (382)
+|++++++|++|||++|++|++|...++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 689999999999999999999988766654
No 20
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=96.96 E-value=0.0053 Score=59.66 Aligned_cols=85 Identities=33% Similarity=0.677 Sum_probs=60.1
Q ss_pred HHHHhhhhcccccccccccccccCCCCcccccccCCce-eeEeecchhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHhHH
Q psy16861 233 LMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNV-CIFVVNVYYALISSSISFWIPGFVMVTMYYRIYKEAVRQRI 311 (382)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~~~ 311 (382)
..+..+|+.+++.+++|....|................ +.......|.+...++.+++|+.+++++|.+|++.++++.+
T Consensus 301 ~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~ 380 (514)
T 3sn6_R 301 VIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ 380 (514)
T ss_dssp HHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHSSSCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccceecccCcccceeecccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 45788999999999889888776655443322211122 22344567778888888999999999999999999999887
Q ss_pred HhhccC
Q psy16861 312 ALSRTS 317 (382)
Q Consensus 312 ~~~~~~ 317 (382)
+.+...
T Consensus 381 ~~~~~~ 386 (514)
T 3sn6_R 381 KIDKSE 386 (514)
T ss_dssp HHHHHC
T ss_pred cccccc
Confidence 765443
No 21
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=96.53 E-value=0.02 Score=55.27 Aligned_cols=81 Identities=35% Similarity=0.664 Sum_probs=56.3
Q ss_pred HHHHHhhhhcccccccccccccccCCCCcccccccCCcee-eEeecchhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHhH
Q psy16861 232 LLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVC-IFVVNVYYALISSSISFWIPGFVMVTMYYRIYKEAVRQR 310 (382)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~~ 310 (382)
.+.+..+|+.+++.+++|....|................| .......|.+...++.+++|+++|+++|.+|++.+++|.
T Consensus 158 ~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~ 237 (500)
T 2rh1_A 158 RVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQL 237 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eehhhHHHHHHHHHHhcchheeeecccccCcceecccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3558889999999998888777655432221111111111 223445677778888899999999999999999999876
Q ss_pred HH
Q psy16861 311 IA 312 (382)
Q Consensus 311 ~~ 312 (382)
++
T Consensus 238 ~~ 239 (500)
T 2rh1_A 238 NI 239 (500)
T ss_dssp SH
T ss_pred HH
Confidence 55
No 22
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=96.04 E-value=0.0024 Score=57.20 Aligned_cols=80 Identities=36% Similarity=0.730 Sum_probs=54.2
Q ss_pred HHHHhhhhcccccccccccccccCCCCccccccc-CCceeeEeecchhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHhHH
Q psy16861 233 LMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKH-HPNVCIFVVNVYYALISSSISFWIPGFVMVTMYYRIYKEAVRQRI 311 (382)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~~~ 311 (382)
..+..+|+.+.+.+.+|....+............ ....+.......|.....++.+++|+.++.++|.+|++.++++.+
T Consensus 130 ~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~ 209 (315)
T 4amj_A 130 VIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR 209 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC--
T ss_pred HhhhHHHHHHHHHHHHHHHHHhccccCCCccccccccccchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4467789999888888887766555443322211 112223344566777778888899999999999999999988766
Q ss_pred H
Q psy16861 312 A 312 (382)
Q Consensus 312 ~ 312 (382)
+
T Consensus 210 ~ 210 (315)
T 4amj_A 210 K 210 (315)
T ss_dssp -
T ss_pred c
Confidence 5
No 23
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=95.89 E-value=0.053 Score=51.33 Aligned_cols=78 Identities=17% Similarity=0.298 Sum_probs=51.8
Q ss_pred HHHHHhhhhcccccccccccccccCCCCcccccccCCceeeEe------ecchhhhhhhhhhhhHhHHHHHHHHHHHHHH
Q psy16861 232 LLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIFV------VNVYYALISSSISFWIPGFVMVTMYYRIYKE 305 (382)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~ 305 (382)
.+.+..+|+.+++.++++.+. |.....+ .....|... ....+.+...++.+++|+++++++|.+|++.
T Consensus 153 ~~~i~~~W~~s~~~~~~~~~~-~~~~~~~-----~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~ 226 (448)
T 2z73_A 153 FIMIIFVWLWSVLWAIGPIFG-WGAYTLE-----GVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMS 226 (448)
T ss_dssp HHHHHHHHHHHHHHHSGGGGT-SSCEEEC-----TTSSSEEECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhc-eeeeeec-----CCceeEecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345778899999988877653 3221111 112233221 1234556666777899999999999999999
Q ss_pred HHHhHHHhhc
Q psy16861 306 AVRQRIALSR 315 (382)
Q Consensus 306 ~~~~~~~~~~ 315 (382)
++++.++.+.
T Consensus 227 l~~~~~~~~~ 236 (448)
T 2z73_A 227 VSNHEKEMAA 236 (448)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998877654
No 24
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=95.85 E-value=0.094 Score=50.76 Aligned_cols=77 Identities=12% Similarity=0.163 Sum_probs=48.4
Q ss_pred HHHHhhhhcccccccccccccccCCCCcccccccCCceeeE----eecchhhhhhhhhhhhHhHHHHHHHHHHHHHHHHH
Q psy16861 233 LMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIF----VVNVYYALISSSISFWIPGFVMVTMYYRIYKEAVR 308 (382)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~ 308 (382)
+.+..+|+.+++.++|+++........ .+........|.. .....|.++.+++.|++|+++|+++|.+|++.+++
T Consensus 156 ~~i~~~W~~s~~~~~p~~~~~~~~~~~-~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~ 234 (510)
T 4grv_A 156 KFISAIWLASALLAIPMLFTMGLQNRS-ADGTHPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTV 234 (510)
T ss_dssp HHHHHHHHHHHHHHTTHHHHEEEEECS-SSSCCGGGEEEEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT
T ss_pred eeehHHHHHHHHHHHHHHHhhcccccc-cCCCCCCccccccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHH
Confidence 456677888888888776543211111 1111111122321 22345777778888999999999999999999987
Q ss_pred hH
Q psy16861 309 QR 310 (382)
Q Consensus 309 ~~ 310 (382)
+.
T Consensus 235 ~~ 236 (510)
T 4grv_A 235 MV 236 (510)
T ss_dssp SC
T ss_pred Hh
Confidence 43
No 25
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=95.70 E-value=0.13 Score=48.28 Aligned_cols=81 Identities=25% Similarity=0.422 Sum_probs=49.3
Q ss_pred HHHHhhhhcccccccccccccccCCCCcccc---cccCCce---e---eEeecchhhhhhhhhhhhHhHHHHHHHHHHHH
Q psy16861 233 LMLSNVWILPGIISFTPIMLGWYTTPDHKQY---RKHHPNV---C---IFVVNVYYALISSSISFWIPGFVMVTMYYRIY 303 (382)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~---~~~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~ 303 (382)
..+..+|+.+++.++++.. .|......... ...+... | .......+.....++.+++|+.+++++|.+|+
T Consensus 148 ~~i~~~Wi~s~~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~ 226 (447)
T 4eiy_A 148 GIIAICWVLSFAIGLTPML-GWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIF 226 (447)
T ss_dssp HHHHHHHHHHHHHHTGGGG-TCSSTTSCCHHHHHHTTCCTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHhhhh-eeccccccCccccccccccccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466779999888887765 34333222111 1111111 1 01112334455566778999999999999999
Q ss_pred HHHHHhHHHhh
Q psy16861 304 KEAVRQRIALS 314 (382)
Q Consensus 304 ~~~~~~~~~~~ 314 (382)
+.++++.++..
T Consensus 227 ~~l~~~~~~~~ 237 (447)
T 4eiy_A 227 LAARRQLADLE 237 (447)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhhhhh
Confidence 99999876643
No 26
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=95.40 E-value=0.12 Score=49.57 Aligned_cols=36 Identities=17% Similarity=0.361 Sum_probs=29.4
Q ss_pred chhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHhHHH
Q psy16861 277 VYYALISSSISFWIPGFVMVTMYYRIYKEAVRQRIA 312 (382)
Q Consensus 277 ~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~~~~ 312 (382)
..|.+...++.+++|+++|+++|.+|++.++++.++
T Consensus 207 ~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~ 242 (502)
T 3odu_A 207 VVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSN 242 (502)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 346666777888999999999999999999885443
No 27
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=95.29 E-value=0.001 Score=44.39 Aligned_cols=29 Identities=17% Similarity=0.363 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy16861 43 IKGMLMCFIIITAILGNLLVIISVIKHRK 71 (382)
Q Consensus 43 ~~~~~~~~i~i~gi~gN~~vl~vi~~~~~ 71 (382)
+..++|.+++++|++||+++++++.++|.
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~ 58 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKG 58 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecc
Confidence 66788999999999999999999988765
No 28
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=95.08 E-value=0.42 Score=46.19 Aligned_cols=70 Identities=24% Similarity=0.466 Sum_probs=47.1
Q ss_pred HHHHHhhhhcccccccccccccccCCCCcccccccCCceeeEe--ecchhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHh
Q psy16861 232 LLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIFV--VNVYYALISSSISFWIPGFVMVTMYYRIYKEAVRQ 309 (382)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~ 309 (382)
.+.+..+|+.+++.+++|.+ .|....+. ..|... ....++.+..++.+++|+.+|+++|.+|++.++++
T Consensus 179 ~~~i~~~W~~s~~~~~~~~~-~~~~~~~~--------~~C~~~~~~~~~~~~~~~~~~~~lPl~ii~~~Y~~I~~~l~~~ 249 (520)
T 3v2y_A 179 FLLISACWVISLILGGLPIM-GWNCISAL--------SSCSTVLPLYHKHYILFCTTVFTLLLLSIVILYCRIYSLVRTR 249 (520)
T ss_dssp HHHHHHHHHHHHHHHHTTTT-TCBCTTCG--------GGBCSSSTTBBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-eeccccCC--------CcccccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34578899999999988875 44433211 123111 11223334455669999999999999999999987
Q ss_pred H
Q psy16861 310 R 310 (382)
Q Consensus 310 ~ 310 (382)
.
T Consensus 250 ~ 250 (520)
T 3v2y_A 250 N 250 (520)
T ss_dssp H
T ss_pred h
Confidence 6
No 29
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=94.87 E-value=0.085 Score=49.72 Aligned_cols=76 Identities=18% Similarity=0.461 Sum_probs=47.6
Q ss_pred HHHHHhhhhcccccccccccccccCCCCcccccccCCcee--eEeecchhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHh
Q psy16861 232 LLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVC--IFVVNVYYALISSSISFWIPGFVMVTMYYRIYKEAVRQ 309 (382)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~ 309 (382)
.+.+..+|+.+++.+.|.. .|.....+... .....| .......|.++..++.+++|+++|+++|.+|++.++++
T Consensus 126 ~~~i~~~W~~~~~~~~p~~--~~~~~~~~~~~--~~~~~C~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~ 201 (452)
T 3rze_A 126 SATILGAWFLSFLWVIPIL--GWNHFMQQTSV--RREDKCETDFYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQH 201 (452)
T ss_dssp HHHHHHHHHHHGGGHHHHH--CCCC---------CCSSSSCCSCTTCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHhccccccc--CCCCeecCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3457788999998877633 23222221111 111222 11334457777788889999999999999999999875
Q ss_pred HH
Q psy16861 310 RI 311 (382)
Q Consensus 310 ~~ 311 (382)
.+
T Consensus 202 ~~ 203 (452)
T 3rze_A 202 CN 203 (452)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 30
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=94.86 E-value=0.089 Score=50.11 Aligned_cols=75 Identities=13% Similarity=0.111 Sum_probs=49.2
Q ss_pred HHHHHhhhhcccccccccccccccCCCCcccccccCCceeeE--------eecchhhhhhhhhhhhHhHHHHHHHHHHHH
Q psy16861 232 LLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIF--------VVNVYYALISSSISFWIPGFVMVTMYYRIY 303 (382)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~ 303 (382)
.+.+..+|+.+++.++++............. ...|.. .....|.++..++.+++|+++|+++|.+|+
T Consensus 138 ~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~-----~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~ 212 (484)
T 3vw7_A 138 SFTCLAIWALAIAGVVPLLLKEQTIQVPGLG-----ITTCHDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSII 212 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCEEEETTTT-----EEEESSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCCCC-----CceeeccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3557889999999888777644332111111 112211 111225566678889999999999999999
Q ss_pred HHHHHhHH
Q psy16861 304 KEAVRQRI 311 (382)
Q Consensus 304 ~~~~~~~~ 311 (382)
+.++++.+
T Consensus 213 ~~l~~~~~ 220 (484)
T 3vw7_A 213 RCLSSSAN 220 (484)
T ss_dssp HHTTSCCC
T ss_pred HHHhHhhH
Confidence 99988654
No 31
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=94.81 E-value=0.13 Score=48.87 Aligned_cols=81 Identities=23% Similarity=0.409 Sum_probs=50.0
Q ss_pred HHHHHhhhhcccccccccccccccCCCCcccc---cccCCc---ee---eEeecchhhhhhhhhhhhHhHHHHHHHHHHH
Q psy16861 232 LLMLSNVWILPGIISFTPIMLGWYTTPDHKQY---RKHHPN---VC---IFVVNVYYALISSSISFWIPGFVMVTMYYRI 302 (382)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~---~~~~~~~~~i~~~~~~~~~P~~ii~~~y~~I 302 (382)
.+.+..+|+.+++..+++.+ .|......... ...+.. .| .......+..+..++.+++|+++|+++|.+|
T Consensus 137 ~~~i~~~W~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I 215 (488)
T 3eml_A 137 KGIIAICWVLSFAIGLTPML-GWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRI 215 (488)
T ss_dssp HHHHHHHHHHHHHHHTTGGG-TCCSSCC-------CCSSCTTCEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-ccccccccccccccccccccccceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 34578899999999988875 34332222111 011110 11 1112234556667788899999999999999
Q ss_pred HHHHHHhHHHh
Q psy16861 303 YKEAVRQRIAL 313 (382)
Q Consensus 303 ~~~~~~~~~~~ 313 (382)
++.++++.++.
T Consensus 216 ~~~l~~~~~~~ 226 (488)
T 3eml_A 216 FLAARRQLNIF 226 (488)
T ss_dssp HHHHTCCCCHH
T ss_pred HHHHHHHHhHH
Confidence 99998865443
No 32
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=94.80 E-value=0.07 Score=50.43 Aligned_cols=80 Identities=10% Similarity=0.071 Sum_probs=49.6
Q ss_pred HHHHHhhhhcccccccccccccccCCCCcccccccCCceeeEeecchhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHhHH
Q psy16861 232 LLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIFVVNVYYALISSSISFWIPGFVMVTMYYRIYKEAVRQRI 311 (382)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~~~ 311 (382)
...+..+|+.+++..+++..........+..................|.+...++.+++|+++|+++|.+|++.++++.+
T Consensus 134 ~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~ 213 (464)
T 4dkl_A 134 KIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRN 213 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSBCCEEETTEEECCBCCSSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCS
T ss_pred HHhHHHHHHHHHHHHHHHHHheeecccCCCceEEeecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34578889999999988776443322221111000000000011334667777788999999999999999999887443
No 33
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=94.68 E-value=0.15 Score=48.27 Aligned_cols=76 Identities=16% Similarity=0.352 Sum_probs=50.5
Q ss_pred HHHHhhhhcccccccccccccccCCCCcccccccCCceeeE--eecchhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHhH
Q psy16861 233 LMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIF--VVNVYYALISSSISFWIPGFVMVTMYYRIYKEAVRQR 310 (382)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~~ 310 (382)
..+..+|+.+++.+.++............ .....|.. .....|.++..++.+++|+.+|+++|++|++.++++.
T Consensus 142 ~~i~~~W~~~~~~~~~~~~~~~~~~~~~~----~~~~~C~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~ 217 (467)
T 3uon_A 142 MMIAAAWVLSFILWAPAILFWQFIVGVRT----VEDGECYIQFFSNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRI 217 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCC----CCSSCCCCGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccC----CCCCcceeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 55788999999998887654221111110 11122321 2344677778888899999999999999999999865
Q ss_pred HH
Q psy16861 311 IA 312 (382)
Q Consensus 311 ~~ 312 (382)
++
T Consensus 218 ~~ 219 (467)
T 3uon_A 218 NI 219 (467)
T ss_dssp CH
T ss_pred hH
Confidence 43
No 34
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=93.43 E-value=0.18 Score=47.52 Aligned_cols=70 Identities=16% Similarity=0.304 Sum_probs=48.7
Q ss_pred HHHHhhhhcccccccccccccccCCCCcccccccCCceeeEe-------ecchhhhhhhhhhhhHhHHHHHHHHHHHHHH
Q psy16861 233 LMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIFV-------VNVYYALISSSISFWIPGFVMVTMYYRIYKE 305 (382)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~ 305 (382)
..+..+|+.+++.+.+............. ..|... ....+.+...++.+++|+.+++++|.+|++.
T Consensus 243 ~~i~~~W~~s~~~~~p~~~~~~~~~~~~~-------~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~ 315 (434)
T 4ea3_A 243 AVNVAIWALASVVGVPVAIMGSAQVEDEE-------IECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRR 315 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEEECCCSSC-------CCEEECCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HhhhhhhhHHHHHHhhHheeeeeEeecCc-------eeEEEecCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44677899999988877765544333321 223221 1234667777888999999999999999988
Q ss_pred HHHh
Q psy16861 306 AVRQ 309 (382)
Q Consensus 306 ~~~~ 309 (382)
++++
T Consensus 316 l~~~ 319 (434)
T 4ea3_A 316 LRGV 319 (434)
T ss_dssp HTTC
T ss_pred Hhhc
Confidence 8764
No 35
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=92.74 E-value=1 Score=42.62 Aligned_cols=69 Identities=36% Similarity=0.574 Sum_probs=48.9
Q ss_pred HHHHhhhhcccccccccccccccCCCCcccccccCCceeeEeecchhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHhHH
Q psy16861 233 LMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIFVVNVYYALISSSISFWIPGFVMVTMYYRIYKEAVRQRI 311 (382)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~~~ 311 (382)
+.+..+|+.+++...++.+. +..... ...|... ...+.++..++.+++|+.+++++|.+|++.++++.+
T Consensus 161 ~~i~~~W~~~~~~~~~~~~~-~~~~~~--------~~~C~~~-~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~ 229 (481)
T 3pbl_A 161 LMITAVWVLAFAVSCPLLFG-FNTTGD--------PTVCSIS-NPDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRR 229 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-TCCCSS--------TTCCSCC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhe-ecccCC--------CCccccc-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 45778899999998877653 332211 1223322 334677778888999999999999999999987543
No 36
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=91.41 E-value=1.1 Score=40.25 Aligned_cols=72 Identities=14% Similarity=0.218 Sum_probs=44.4
Q ss_pred HHHhhhhcccccccccccccccCCCCcccccccCCceeeE--------eecchhhhhhhhhhhhHhHHHHHHHHHHHHHH
Q psy16861 234 MLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIF--------VVNVYYALISSSISFWIPGFVMVTMYYRIYKE 305 (382)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~ 305 (382)
.+..+|+.+.+.+.++... |.....+. ....|.. .....|......+.+++|+.++.++|.+|++.
T Consensus 157 ~i~~~W~~~~~~~~~~~~~-~~~~~~~~-----~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~ 230 (349)
T 1u19_A 157 GVAFTWVMALACAAPPLVG-WSRYIPEG-----MQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFT 230 (349)
T ss_dssp HHHHHHHHHHHHHSGGGTT-SSCCEEET-----TTTEEECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTS
T ss_pred HHHHHHHHHHHHHHHHHHh-eeeeeccC-----CceeecccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455677777777776642 32221111 1122221 12345666677778899999999999999988
Q ss_pred HHHhHH
Q psy16861 306 AVRQRI 311 (382)
Q Consensus 306 ~~~~~~ 311 (382)
++++.+
T Consensus 231 l~~~~~ 236 (349)
T 1u19_A 231 VKEAAA 236 (349)
T ss_dssp SCSCCC
T ss_pred HHHhhh
Confidence 876543
No 37
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=88.77 E-value=2.5 Score=38.06 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=27.3
Q ss_pred chhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHh
Q psy16861 277 VYYALISSSISFWIPGFVMVTMYYRIYKEAVRQ 309 (382)
Q Consensus 277 ~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~ 309 (382)
..|.+...++.+++|+.++.++|.+|++.++++
T Consensus 194 ~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~ 226 (364)
T 2ks9_A 194 KVYHICVTVLIYFLPLLVIGYAYTVVGITLWAS 226 (364)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 356666777888999999999999999888654
No 38
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=85.60 E-value=0.045 Score=32.56 Aligned_cols=24 Identities=8% Similarity=0.169 Sum_probs=19.6
Q ss_pred CCCCCCccceeeeccccccchhcc
Q psy16861 339 DTPQSTPVTRNVRTHSVTLNAKKK 362 (382)
Q Consensus 339 ~~~~~np~~y~~~~~~~~~~~~~~ 362 (382)
.++..||++|+..+++++++.++.
T Consensus 12 ~ns~lNPiIY~~~~~~fr~~~~~~ 35 (40)
T 2koe_A 12 LNSTVNPIIYALRSKDLRHAFRSM 35 (40)
T ss_dssp HHHHSSTTTTBTTBHHHHHHHTTT
T ss_pred HHHHHHHHHHHHccHHHHHHHHHH
Confidence 467899999999999888776654
No 39
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=83.75 E-value=0.2 Score=44.29 Aligned_cols=75 Identities=13% Similarity=0.120 Sum_probs=44.3
Q ss_pred HHhhhhcccccccccccccccCCCCcccccccCCce-eeEeecchhhhhhhhhhhhHhHHHHHHHHHHHHHHHHHh
Q psy16861 235 LSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNV-CIFVVNVYYALISSSISFWIPGFVMVTMYYRIYKEAVRQ 309 (382)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~P~~ii~~~y~~I~~~~~~~ 309 (382)
+..+|+.+.+.+.|+.........+........... ........+.+....+.+.+|+.++..+|.++.+.++++
T Consensus 129 ~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~ 204 (296)
T 2lnl_A 129 CLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKA 204 (296)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCCSCCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSC
T ss_pred ehHHHHHHHHHhcchhhcceeecCCCCCceeeeeccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445677777777666554443333222211111111 111233456677778888999999999999998776553
No 40
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=77.84 E-value=0.49 Score=26.62 Aligned_cols=25 Identities=8% Similarity=0.343 Sum_probs=19.2
Q ss_pred eecchhhhhhhhhhhhHhHHHHHHH
Q psy16861 274 VVNVYYALISSSISFWIPGFVMVTM 298 (382)
Q Consensus 274 ~~~~~~~i~~~~~~~~~P~~ii~~~ 298 (382)
..+....++..+++||+|+.++.+.
T Consensus 4 ~~k~l~~vv~~F~icW~P~~i~~~~ 28 (33)
T 2ki9_A 4 LAKTLGLVLAVLLICWFPVLALMAH 28 (33)
T ss_dssp SSSHHHHHHHHHTTTSSHHHHHHTT
T ss_pred hhhhHHHHHHHHHHHHhHHHHHHHH
Confidence 3456677888999999999886543
No 41
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=50.28 E-value=22 Score=20.35 Aligned_cols=28 Identities=11% Similarity=0.231 Sum_probs=17.6
Q ss_pred hHhHHHH-HHHHHHHHHHHHHhHHHhhcc
Q psy16861 289 WIPGFVM-VTMYYRIYKEAVRQRIALSRT 316 (382)
Q Consensus 289 ~~P~~ii-~~~y~~I~~~~~~~~~~~~~~ 316 (382)
++|++++ ++.|..+.+-=+|+.|+.++.
T Consensus 6 ~l~~v~~~~ifYFl~iRPQ~Kr~K~~~~m 34 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMILRPQQKRTKEHKKL 34 (37)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4455544 667888877777766665443
Done!