Query psy16862
Match_columns 303
No_of_seqs 201 out of 1740
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 23:57:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16862.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16862hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 1.2E-34 4.3E-39 267.4 19.8 205 35-240 26-239 (510)
2 2rh1_A Beta-2-adrenergic recep 100.0 3.5E-32 1.2E-36 250.4 17.1 201 39-239 38-239 (500)
3 3uon_A Human M2 muscarinic ace 100.0 3.1E-31 1.1E-35 241.5 20.3 198 40-242 22-222 (467)
4 3odu_A C-X-C chemokine recepto 100.0 7.1E-32 2.4E-36 248.0 14.8 197 37-242 44-245 (502)
5 4dkl_A MU-type opioid receptor 100.0 9.4E-32 3.2E-36 244.6 15.1 203 39-242 15-217 (464)
6 3eml_A Human adenosine A2A rec 100.0 1.1E-30 3.9E-35 238.9 17.5 200 41-243 21-229 (488)
7 4eiy_A Adenosine receptor A2A/ 100.0 2.2E-30 7.4E-35 234.6 18.2 203 37-242 27-238 (447)
8 3vw7_A Proteinase-activated re 100.0 1.9E-30 6.6E-35 237.4 17.5 203 38-241 17-223 (484)
9 3sn6_R Lysozyme, beta-2 adrene 100.0 2.2E-31 7.7E-36 245.9 11.3 206 40-245 181-387 (514)
10 2ks9_A Substance-P receptor; w 100.0 6.2E-30 2.1E-34 225.8 19.1 194 41-236 32-226 (364)
11 4amj_A Beta-1 adrenergic recep 100.0 5.2E-31 1.8E-35 227.5 11.5 203 39-241 9-212 (315)
12 3v2y_A Sphingosine 1-phosphate 100.0 2.7E-29 9.3E-34 232.2 23.7 188 41-237 63-250 (520)
13 3pbl_A D(3) dopamine receptor, 100.0 1.9E-30 6.4E-35 237.3 15.7 192 39-240 36-231 (481)
14 3rze_A Histamine H1 receptor, 100.0 1.6E-30 5.6E-35 235.7 15.1 198 41-242 8-207 (452)
15 2z73_A Rhodopsin; visual pigme 100.0 1.7E-29 5.9E-34 229.2 20.6 201 38-244 31-238 (448)
16 1u19_A Rhodopsin; G protein-co 100.0 5.9E-30 2E-34 224.3 15.9 194 37-237 34-235 (349)
17 4ea3_A Fusion protein of nocic 100.0 1.3E-29 4.6E-34 229.2 15.2 198 38-236 122-319 (434)
18 2lnl_A C-X-C chemokine recepto 100.0 2.9E-28 1E-32 209.2 13.8 195 38-235 8-203 (296)
19 1hll_A Alpha-2A adrenergic rec 98.5 2.2E-08 7.6E-13 54.8 1.4 30 127-156 2-31 (32)
20 2lot_A Apelin receptor; membra 95.7 0.00057 1.9E-08 43.0 -2.2 29 43-71 30-58 (64)
21 3odu_A C-X-C chemokine recepto 87.3 2.8 9.6E-05 37.3 9.3 37 35-71 45-81 (502)
22 2rdd_B UPF0092 membrane protei 81.3 2.2 7.6E-05 23.2 3.6 28 216-243 6-34 (37)
23 4dkl_A MU-type opioid receptor 59.8 66 0.0023 27.7 10.2 37 35-71 14-50 (464)
24 2ks9_A Substance-P receptor; w 59.3 75 0.0026 26.3 10.3 49 40-90 28-76 (364)
25 3sn6_R Lysozyme, beta-2 adrene 57.5 45 0.0015 29.6 8.8 39 35-73 179-217 (514)
26 3rze_A Histamine H1 receptor, 50.6 65 0.0022 27.6 8.5 31 43-73 13-43 (452)
27 2z73_A Rhodopsin; visual pigme 44.8 1.5E+02 0.0051 25.4 17.5 33 39-71 29-61 (448)
28 4grv_A Neurotensin receptor ty 44.5 80 0.0027 28.0 8.3 33 33-65 27-59 (510)
29 4eiy_A Adenosine receptor A2A/ 38.5 1.2E+02 0.004 25.9 8.2 42 32-73 25-66 (447)
30 3arc_M Photosystem II reaction 31.3 49 0.0017 17.7 2.7 23 207-229 7-29 (36)
31 3lcn_C MRNA transport factor G 30.3 6.6 0.00023 19.5 -0.7 13 289-301 13-25 (29)
32 3arc_I Photosystem II reaction 26.5 65 0.0022 17.3 2.6 16 44-59 11-26 (38)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-34 Score=267.38 Aligned_cols=205 Identities=18% Similarity=0.308 Sum_probs=165.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc---cchhHHHHHHHHHhHHHHhhhhhHHHHHHhc--ccccc
Q psy16862 35 HIHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLR---IITNYFVVSLAFADLLVALCVMPFNAIVSLT--DEWYF 109 (303)
Q Consensus 35 ~~~~~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~---~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~--~~~~~ 109 (303)
.......++..+++++++++|++||+++++++.+++++| +++|+|++|||++|++.+++.+|+.+..... +.|.+
T Consensus 26 ~~~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~ 105 (510)
T 4grv_A 26 NTDIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAF 105 (510)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSS
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEh
Confidence 344556788889999999999999999999999876544 7889999999999999999999988876654 56999
Q ss_pred ccccchhchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccCCCcc
Q psy16862 110 GYFMCDVWNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQ 189 (303)
Q Consensus 110 ~~~~C~~~~~~~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~ 189 (303)
|+.+|++..++..++..+|++++++||+|||+||++|++|+...+++++..+++++|++++++++|+++.... ......
T Consensus 106 g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~-~~~~~~ 184 (510)
T 4grv_A 106 GDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGL-QNRSAD 184 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEE-EECSSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcc-cccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999988543221 111111
Q ss_pred cccCCCceEEEE----ehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHh
Q psy16862 190 YRKHHPNVCIFV----VNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKKKKR 240 (303)
Q Consensus 190 ~~~~~~~~c~~~----~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~~~~ 240 (303)
........|... ....|..+..++.+++|+++|+++|.+|++.++++.+..
T Consensus 185 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~ 239 (510)
T 4grv_A 185 GTHPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIF 239 (510)
T ss_dssp SCCGGGEEEEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHH
T ss_pred CCCCCccccccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhh
Confidence 111222345432 234566677778899999999999999999998765543
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.98 E-value=3.5e-32 Score=250.42 Aligned_cols=201 Identities=37% Similarity=0.696 Sum_probs=171.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhccccccccccchhch
Q psy16862 39 FPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWN 118 (303)
Q Consensus 39 ~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~ 118 (303)
...++..+++.+++++|++||+++++++.++++++++.++|++|||++|++.+++.+|+.+...+.+.|.+|...|++..
T Consensus 38 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~ 117 (500)
T 2rh1_A 38 VWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWT 117 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHH
Confidence 33677788999999999999999999999999999999999999999999999999999888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccCC-CcccccCCCce
Q psy16862 119 SFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPD-HKQYRKHHPNV 197 (303)
Q Consensus 119 ~~~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 197 (303)
++..++..+|++++++||+|||+||++|++|+...+++++..+++++|+++++++++|.++++..... ....|......
T Consensus 118 ~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~~~~c~~~~~~ 197 (500)
T 2rh1_A 118 SIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETC 197 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccccCcceecccccc
Confidence 99999999999999999999999999999999999999999999999999999987675555533222 11223222222
Q ss_pred EEEEehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy16862 198 CIFVVNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKKKK 239 (303)
Q Consensus 198 c~~~~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~~~ 239 (303)
|.......|.++..++.+++|+++++++|.+|++.++++.++
T Consensus 198 ~~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~ 239 (500)
T 2rh1_A 198 CDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNI 239 (500)
T ss_dssp CCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSH
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233445677788888889999999999999999999998766
No 3
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.98 E-value=3.1e-31 Score=241.45 Aligned_cols=198 Identities=24% Similarity=0.451 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhccccccccccchhchH
Q psy16862 40 PFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNS 119 (303)
Q Consensus 40 ~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~ 119 (303)
..++..+++.+++++|++||+++++++.++++++++.++|++|||++|++.+++.+|..+.....+.|.++...|++..+
T Consensus 22 ~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 101 (467)
T 3uon_A 22 EVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLA 101 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHHH
Confidence 36778899999999999999999999999999999999999999999999999999999998888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccc---cCCCcccccCCCc
Q psy16862 120 FDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYT---TPDHKQYRKHHPN 196 (303)
Q Consensus 120 ~~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 196 (303)
+..++..+|++++++||+|||+||++|++|+...+.+++..+++++|++++++++|+++..... .......|....
T Consensus 102 ~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~- 180 (467)
T 3uon_A 102 LDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQF- 180 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCCGG-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcceeec-
Confidence 9999999999999999999999999999999999999999999999999999998885432211 111222232221
Q ss_pred eEEEEehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy16862 197 VCIFVVNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKKKKRKK 242 (303)
Q Consensus 197 ~c~~~~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~~~~~~ 242 (303)
.....|.++..++.+++|+++++++|+.|++.++++.++.+.
T Consensus 181 ----~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~ 222 (467)
T 3uon_A 181 ----FSNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEM 222 (467)
T ss_dssp ----GGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred ----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 134567777888889999999999999999999998765544
No 4
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.97 E-value=7.1e-32 Score=247.99 Aligned_cols=197 Identities=24% Similarity=0.366 Sum_probs=167.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhccccccccccchh
Q psy16862 37 HIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDV 116 (303)
Q Consensus 37 ~~~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~~~~~~~~~~C~~ 116 (303)
.....++..+++.+++++|++||+++++++.++++++++.++|++|||++|++.+ +.+|..+..... .|.++...|++
T Consensus 44 ~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C~~ 121 (502)
T 3odu_A 44 ANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLCKA 121 (502)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhhhh
Confidence 3455788899999999999999999999999999999999999999999999995 578887776655 68999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccCCCcccccCCCc
Q psy16862 117 WNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPN 196 (303)
Q Consensus 117 ~~~~~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (303)
..++..++..+|++++++||+|||+||++|++|+...+.+++..+++++|++++++++|+++......... ..
T Consensus 122 ~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~-------~~ 194 (502)
T 3odu_A 122 VHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADD-------RY 194 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECSS-------SE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccCC-------ce
Confidence 99999999999999999999999999999999999999999999999999999999999866544333222 23
Q ss_pred eEEEE-----ehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy16862 197 VCIFV-----VNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKKKKRKK 242 (303)
Q Consensus 197 ~c~~~-----~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~~~~~~ 242 (303)
.|... ....|.+...++.+++|+++++++|+.|++.++++.++.+.
T Consensus 195 ~C~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~ 245 (502)
T 3odu_A 195 ICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFE 245 (502)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCHHH
T ss_pred EEeecCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhh
Confidence 34322 23446666778889999999999999999999997665443
No 5
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.97 E-value=9.4e-32 Score=244.58 Aligned_cols=203 Identities=21% Similarity=0.334 Sum_probs=170.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhccccccccccchhch
Q psy16862 39 FPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWN 118 (303)
Q Consensus 39 ~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~ 118 (303)
...++..+++.+++++|++||+++++++.++++++++.++|++|||++|++.++. +|..+.....+.|.++...|++..
T Consensus 15 ~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~~ 93 (464)
T 4dkl_A 15 VTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIVI 93 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhHH
Confidence 4478888999999999999999999999999999999999999999999999875 888888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccCCCcccccCCCceE
Q psy16862 119 SFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVC 198 (303)
Q Consensus 119 ~~~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 198 (303)
++..++..+|++++++||+|||+||++|++|+...+.+++..+++++|++++++++|+++........+...|.......
T Consensus 94 ~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~ 173 (464)
T 4dkl_A 94 SIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHP 173 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETTEEECCBCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCCCceEEeecCCc
Confidence 99999999999999999999999999999999999999999999999999999999887654433333333332222111
Q ss_pred EEEehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy16862 199 IFVVNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKKKKRKK 242 (303)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~~~~~~ 242 (303)
.......|.++..++.+++|+++++++|..|++.++++++..+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~ 217 (464)
T 4dkl_A 174 TWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEM 217 (464)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhh
Confidence 11123456777778889999999999999999999887664443
No 6
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.97 E-value=1.1e-30 Score=238.88 Aligned_cols=200 Identities=28% Similarity=0.396 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhccccccccccchhchHH
Q psy16862 41 FIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSF 120 (303)
Q Consensus 41 ~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 120 (303)
..+..+++.+++++|++||+++++++.++++++++.++|++|||++|++.+++.+|..+.... .|..+...|++..++
T Consensus 21 ~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~~~~C~~~~~~ 98 (488)
T 3eml_A 21 SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLFIACF 98 (488)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEECHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccchHHHHHHHH
Confidence 567788899999999999999999999999999999999999999999999989998776443 577888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccC------CCcccccCC
Q psy16862 121 DVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTP------DHKQYRKHH 194 (303)
Q Consensus 121 ~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 194 (303)
..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+++ ++.... .....|...
T Consensus 99 ~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~ 177 (488)
T 3eml_A 99 VLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPML-GWNNCGQPKEGKNHSQGCGEG 177 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGG-TCCSSCC-------CCSSCTT
T ss_pred HHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHh-ccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999988854 332211 122344444
Q ss_pred CceEEE---EehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhh
Q psy16862 195 PNVCIF---VVNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKKKKRKKK 243 (303)
Q Consensus 195 ~~~c~~---~~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~~~~~~~ 243 (303)
...|.. .....+.++..++.+++|+++++++|..|++.++++.++.+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~~ 229 (488)
T 3eml_A 178 QVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEML 229 (488)
T ss_dssp CEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred cceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhh
Confidence 444421 2224455556778899999999999999999999887665543
No 7
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.97 E-value=2.2e-30 Score=234.60 Aligned_cols=203 Identities=28% Similarity=0.404 Sum_probs=166.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhccccccccccchh
Q psy16862 37 HIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDV 116 (303)
Q Consensus 37 ~~~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~~~~~~~~~~C~~ 116 (303)
......+..+++.+++++|++||+++++++.++++++++.++|++|||++|++.+++.+|..+.... .|..+...|++
T Consensus 27 ~~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~--~~~~~~~~C~~ 104 (447)
T 4eiy_A 27 PIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLF 104 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHT--TCEEEHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccccCccHHHH
Confidence 3445678888999999999999999999999999999999999999999999999989998776443 56778899999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccCC------Cccc
Q psy16862 117 WNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPD------HKQY 190 (303)
Q Consensus 117 ~~~~~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~------~~~~ 190 (303)
..++..++..+|++++++||+|||++|++|++|+...+.+++..+++++|++++++++|+++ ++..... ....
T Consensus 105 ~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~-~~~~~~~~~~~~~~~~~ 183 (447)
T 4eiy_A 105 IACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPML-GWNNCGQPKEGKNHSQG 183 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGG-TCSSTTSCCHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhh-eeccccccCcccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998854 3322211 1123
Q ss_pred ccCCCceEEE---EehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy16862 191 RKHHPNVCIF---VVNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKKKKRKK 242 (303)
Q Consensus 191 ~~~~~~~c~~---~~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~~~~~~ 242 (303)
|......|.. .....+.++..++.+++|+++++++|..|++.++++.++...
T Consensus 184 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~ 238 (447)
T 4eiy_A 184 CGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLED 238 (447)
T ss_dssp CCTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 4443334422 122344445566778999999999999999999998776554
No 8
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.97 E-value=1.9e-30 Score=237.37 Aligned_cols=203 Identities=17% Similarity=0.182 Sum_probs=158.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhc-cccccccccchh
Q psy16862 38 IFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLT-DEWYFGYFMCDV 116 (303)
Q Consensus 38 ~~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~-~~~~~~~~~C~~ 116 (303)
....++..+++++++++|++||+++++++.+++++++++++|++|||++|++.++. +|..+..... +.|.++...|++
T Consensus 17 ~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~~~~~~~~~~~~C~~ 95 (484)
T 3vw7_A 17 SWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYFSGSDWQFGSELCRF 95 (484)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHHTTSCCCSCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCcccchhHHhH
Confidence 34477888999999999999999999999999999999999999999999999764 5555554444 589999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhcccccccccc--CCCcccccCC
Q psy16862 117 WNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTT--PDHKQYRKHH 194 (303)
Q Consensus 117 ~~~~~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 194 (303)
..++..++..+|++++++||+|||+||++|++|+...+.+++..+++++|++++++++|+++...... ......|...
T Consensus 96 ~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~~~ 175 (484)
T 3vw7_A 96 VTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCHDV 175 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEESSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceeecc
Confidence 99999999999999999999999999999999999999999999999999999999988855433211 1111222221
Q ss_pred CceE-EEEehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy16862 195 PNVC-IFVVNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKKKKRK 241 (303)
Q Consensus 195 ~~~c-~~~~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~~~~~ 241 (303)
...- .......|.++..++.+++|+++++++|+.|++.++++.++.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~~ 223 (484)
T 3vw7_A 176 LSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFE 223 (484)
T ss_dssp CSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHH
T ss_pred CCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHHH
Confidence 1100 0111223666667888999999999999999999998875443
No 9
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.97 E-value=2.2e-31 Score=245.86 Aligned_cols=206 Identities=37% Similarity=0.706 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhccccccccccchhchH
Q psy16862 40 PFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNS 119 (303)
Q Consensus 40 ~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~ 119 (303)
..++..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+++.+|..+.....+.|.++...|++..+
T Consensus 181 ~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 260 (514)
T 3sn6_R 181 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTS 260 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHH
Confidence 46678889999999999999999999999999999999999999999999999999998888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccCCCc-ccccCCCceE
Q psy16862 120 FDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHK-QYRKHHPNVC 198 (303)
Q Consensus 120 ~~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~c 198 (303)
+..++..+|++++++||+|||++|++|++|+...+++++..+++++|+++++++++|.++++....... ..|......+
T Consensus 261 l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~~~~~ 340 (514)
T 3sn6_R 261 IDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCC 340 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeeccccc
Confidence 999999999999999999999999999999998999999999999999999999888766654333322 2232222223
Q ss_pred EEEehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy16862 199 IFVVNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKKKKRKKKKN 245 (303)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~~~~~~~~~ 245 (303)
.......|.+...++.+++|+++++++|.+|++.++++.++.+....
T Consensus 341 ~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~ 387 (514)
T 3sn6_R 341 DFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEG 387 (514)
T ss_dssp CCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 34455678888888999999999999999999999998877765544
No 10
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.97 E-value=6.2e-30 Score=225.76 Aligned_cols=194 Identities=23% Similarity=0.417 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhccccccccccchhchHH
Q psy16862 41 FIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSF 120 (303)
Q Consensus 41 ~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 120 (303)
..+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++.+|..+.....+.|..++..|++..++
T Consensus 32 ~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 111 (364)
T 2ks9_A 32 IVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFF 111 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHH
Confidence 45567888999999999999999999999999999999999999999999988899888877778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccCCCcccccCCCceEE-
Q psy16862 121 DVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCI- 199 (303)
Q Consensus 121 ~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~- 199 (303)
..++..+|++++++||+|||+||++|++|+ .+.+++..+++++|+++++.++|+.+........+...|........
T Consensus 112 ~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~ 189 (364)
T 2ks9_A 112 PIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPN 189 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCTTCSSBCCCCSCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHHhhheecCCCCEEeecCCCcch
Confidence 999999999999999999999999999976 57888889999999999999988765444333333333332221110
Q ss_pred EEehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy16862 200 FVVNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKK 236 (303)
Q Consensus 200 ~~~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~ 236 (303)
......|.....++.+++|+++++++|..|++.++++
T Consensus 190 ~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~ 226 (364)
T 2ks9_A 190 KIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWAS 226 (364)
T ss_dssp TTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0122456677778889999999999999999888653
No 11
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.97 E-value=5.2e-31 Score=227.55 Aligned_cols=203 Identities=36% Similarity=0.677 Sum_probs=172.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhccccccccccchhch
Q psy16862 39 FPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWN 118 (303)
Q Consensus 39 ~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~ 118 (303)
.......+++.+++++|++||+++++++.++++++++.+++++|||++|++.++..+|..+.....+.|..++..|++..
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 88 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWT 88 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHH
Confidence 34677888999999999999999999999999999999999999999999999889999888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccCC-CcccccCCCce
Q psy16862 119 SFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPD-HKQYRKHHPNV 197 (303)
Q Consensus 119 ~~~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 197 (303)
++..++..+|++++++||+|||+||++|++|+...+++++..+++++|+++++.+.+|.+..+....+ +...|......
T Consensus 89 ~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 168 (315)
T 4amj_A 89 SLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGC 168 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCcccccccccc
Confidence 99999999999999999999999999999999889999999999999999999998886654432222 22233334444
Q ss_pred EEEEehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhh
Q psy16862 198 CIFVVNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKKKKRK 241 (303)
Q Consensus 198 c~~~~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~~~~~ 241 (303)
|+......|.....++.+++|+++++++|..|++.++++.++.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~ 212 (315)
T 4amj_A 169 CDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKID 212 (315)
T ss_dssp CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC-----
T ss_pred chhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 44456677888888899999999999999999999987765443
No 12
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.97 E-value=2.7e-29 Score=232.22 Aligned_cols=188 Identities=18% Similarity=0.252 Sum_probs=151.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhccccccccccchhchHH
Q psy16862 41 FIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSF 120 (303)
Q Consensus 41 ~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 120 (303)
..+..+++.+++++|++||+++++++.+++++|+++++|++|||++|++.++..+|..+.. ....|..+...|.+..++
T Consensus 63 ~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~ 141 (520)
T 3v2y_A 63 IKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGS 141 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHH
Confidence 4788899999999999999999999999999999999999999999999999888876665 556788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccCCCcccccCCCceEEE
Q psy16862 121 DVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCIF 200 (303)
Q Consensus 121 ~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 200 (303)
..++..+|++++++||+|||+||+ |++|+...+++++..+++++|++++++++||+ +++... .+...|.....
T Consensus 142 ~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~-~~~~~~-~~~~~C~~~~~---- 214 (520)
T 3v2y_A 142 MFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPI-MGWNCI-SALSSCSTVLP---- 214 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTT-TTCBCT-TCGGGBCSSST----
T ss_pred HHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHH-Heeccc-cCCCcccccCC----
Confidence 999999999999999999999999 99999999999999999999999999999884 445333 22222322211
Q ss_pred EehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q psy16862 201 VVNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKK 237 (303)
Q Consensus 201 ~~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~ 237 (303)
.....|.+ ..++.+++|+++++++|.+|++.+++++
T Consensus 215 ~~~~~~~~-~~~~~~~lPl~ii~~~Y~~I~~~l~~~~ 250 (520)
T 3v2y_A 215 LYHKHYIL-FCTTVFTLLLLSIVILYCRIYSLVRTRN 250 (520)
T ss_dssp TBBHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 12233443 3455699999999999999999999987
No 13
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.97 E-value=1.9e-30 Score=237.26 Aligned_cols=192 Identities=38% Similarity=0.610 Sum_probs=160.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhc-cccccccccchhc
Q psy16862 39 FPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLT-DEWYFGYFMCDVW 117 (303)
Q Consensus 39 ~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~-~~~~~~~~~C~~~ 117 (303)
....+..+++.+++++|++||+++++++.++++++++.++|++|||++|++.+++.+|..+...+. +.|.++...|++.
T Consensus 36 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~ 115 (481)
T 3pbl_A 36 RPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVF 115 (481)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhH
Confidence 446677788999999999999999999999999999999999999999999999899988876666 5789999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC---CcccchhhhHHHHHHHHhhhhhhhhccccccccccCCCcccccCC
Q psy16862 118 NSFDVYFSTASILHLCCISVDRYYAIVKPLQY---PIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHH 194 (303)
Q Consensus 118 ~~~~~~~~~~s~~~l~~iaidRy~aI~~P~~~---~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (303)
.++..++..+|++++++||+|||+||++|++| ....+.+++..+++++|++++++++|+++ ++... ....
T Consensus 116 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~-~~~~~-~~~~----- 188 (481)
T 3pbl_A 116 VTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLF-GFNTT-GDPT----- 188 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHT-TTCCC-SSTT-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHh-eeccc-CCCC-----
Confidence 99999999999999999999999999999998 56778899999999999999999988854 33221 2222
Q ss_pred CceEEEEehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHh
Q psy16862 195 PNVCIFVVNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKKKKR 240 (303)
Q Consensus 195 ~~~c~~~~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~~~~ 240 (303)
.|... ...|..+..++.+++|+++++++|+.|++.++++.+++
T Consensus 189 --~C~~~-~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~ 231 (481)
T 3pbl_A 189 --VCSIS-NPDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKN 231 (481)
T ss_dssp --CCSCC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred --ccccc-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 23222 23467777788899999999999999999999876543
No 14
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=235.73 Aligned_cols=198 Identities=24% Similarity=0.424 Sum_probs=165.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhccccccccccchhchHH
Q psy16862 41 FIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVWNSF 120 (303)
Q Consensus 41 ~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 120 (303)
.++..+++.+++++|++||+++++++.++++++++.++|++|||++|++.+++.+|..+.....+.|.++...|++..++
T Consensus 8 ~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 87 (452)
T 3rze_A 8 LMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSM 87 (452)
T ss_dssp -CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHH
Confidence 44567888999999999999999999999999999999999999999999999999999998888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccCCCcccccCCCceEE-
Q psy16862 121 DVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNVCI- 199 (303)
Q Consensus 121 ~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~- 199 (303)
..++..+|++++++||+|||++|++|++|+...+.+++..+++++|++++++++|.+....+..... ......|.
T Consensus 88 ~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~----~~~~~~C~~ 163 (452)
T 3rze_A 88 DYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTS----VRREDKCET 163 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-----------CCSSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccc----cCCCCeecC
Confidence 9999999999999999999999999999999999999999999999999999887543322221110 01112231
Q ss_pred -EEehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy16862 200 -FVVNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKKKKRKK 242 (303)
Q Consensus 200 -~~~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~~~~~~ 242 (303)
......|.++..++.+++|+++++++|+.|++.++++.+++..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~ 207 (452)
T 3rze_A 164 DFYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEM 207 (452)
T ss_dssp SCTTCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHH
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 2234557777788889999999999999999999887655443
No 15
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.97 E-value=1.7e-29 Score=229.21 Aligned_cols=201 Identities=23% Similarity=0.369 Sum_probs=168.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhh-hhHHHHHHhccccccccccchh
Q psy16862 38 IFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCV-MPFNAIVSLTDEWYFGYFMCDV 116 (303)
Q Consensus 38 ~~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~-~~~~~~~~~~~~~~~~~~~C~~ 116 (303)
.....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++. +|..+.....+.|.++...|++
T Consensus 31 ~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~ 110 (448)
T 2z73_A 31 DAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKV 110 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHH
Confidence 344677888999999999999999999999999999999999999999999998764 8888887778889999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccCCCcccccCCCc
Q psy16862 117 WNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPN 196 (303)
Q Consensus 117 ~~~~~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (303)
..++..++..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++++++ ++.....+ ....
T Consensus 111 ~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~-~~~~~~~~-----~~~~ 184 (448)
T 2z73_A 111 YGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIF-GWGAYTLE-----GVLC 184 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGG-TSSCEEEC-----TTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHh-ceeeeeec-----CCce
Confidence 99999999999999999999999999999999999999999999999999999999988754 33111111 1122
Q ss_pred eEEEE------ehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q psy16862 197 VCIFV------VNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKKKKRKKKK 244 (303)
Q Consensus 197 ~c~~~------~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~~~~~~~~ 244 (303)
.|... ....|.....++.+++|+++++++|..|++.++++.++.+...
T Consensus 185 ~c~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~ 238 (448)
T 2z73_A 185 NCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMA 238 (448)
T ss_dssp SEEECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred eEecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34322 2245566667778999999999999999999999887766543
No 16
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.97 E-value=5.9e-30 Score=224.31 Aligned_cols=194 Identities=20% Similarity=0.329 Sum_probs=162.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhccccccccccchh
Q psy16862 37 HIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDV 116 (303)
Q Consensus 37 ~~~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~~~~~~~~~~C~~ 116 (303)
......+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++..+|..+.....+.|..++..|++
T Consensus 34 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 113 (349)
T 1u19_A 34 EPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNL 113 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHH
Confidence 34457788889999999999999999999999999999999999999999999999889988887777889999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccCCCcccccCCCc
Q psy16862 117 WNSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPN 196 (303)
Q Consensus 117 ~~~~~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (303)
..++..++..+|++++++||+|||+||++|++|+. .+.+++...++++|+++++.++|+++ ++.....+ ....
T Consensus 114 ~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~-~~~~~~~~-----~~~~ 186 (349)
T 1u19_A 114 EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLV-GWSRYIPE-----GMQC 186 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGT-TSSCCEEE-----TTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHH-heeeeecc-----CCce
Confidence 99999999999999999999999999999999877 68899999999999999999988854 33111111 1112
Q ss_pred eEEEE--------ehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q psy16862 197 VCIFV--------VNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKKK 237 (303)
Q Consensus 197 ~c~~~--------~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~~ 237 (303)
.|... ....|.....++.+++|+++++++|.+|++.++++.
T Consensus 187 ~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~ 235 (349)
T 1u19_A 187 SCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA 235 (349)
T ss_dssp EEECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCC
T ss_pred eecccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34321 235566777778899999999999999998886553
No 17
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.96 E-value=1.3e-29 Score=229.17 Aligned_cols=198 Identities=23% Similarity=0.321 Sum_probs=158.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhccccccccccchhc
Q psy16862 38 IFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVW 117 (303)
Q Consensus 38 ~~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~~~~~~~~~~C~~~ 117 (303)
....++..+++.+++++|++||+++++++.+++++|++.+++++|||++|++. ++.+|..+.....+.|..+...|++.
T Consensus 122 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~~ 200 (434)
T 4ea3_A 122 LGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKTV 200 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHHH
Confidence 34477888899999999999999999999999999999999999999999998 56788888888888899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccCCCcccccCCCce
Q psy16862 118 NSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKHHPNV 197 (303)
Q Consensus 118 ~~~~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (303)
.++..++..+|++++++||+|||+||++|++|+...+++++..+++++|++++++++|+.+.+..........|......
T Consensus 201 ~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~c~~~~~~ 280 (434)
T 4ea3_A 201 IAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPT 280 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSSCCCEEECCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecCceeEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999988766554433332222211110
Q ss_pred EEEEehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy16862 198 CIFVVNVYYALISSSISFWIPGFVMKKKKKRKKKKKKKK 236 (303)
Q Consensus 198 c~~~~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~~ 236 (303)
........|.+...++.+++|+++++++|..|++.++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~ 319 (434)
T 4ea3_A 281 PQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGV 319 (434)
T ss_dssp SHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 011122456677778889999999999999999888653
No 18
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.95 E-value=2.9e-28 Score=209.20 Aligned_cols=195 Identities=25% Similarity=0.345 Sum_probs=152.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHHHhhhhhHHHHHHhccccccccccchhc
Q psy16862 38 IFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLVALCVMPFNAIVSLTDEWYFGYFMCDVW 117 (303)
Q Consensus 38 ~~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~~l~~~~~~~~~~~~~~~~~~~~~C~~~ 117 (303)
.....+..+++.+++++|++||+++++++.+++++|+++|++++|||++|++.++ .+|..+.... ..|..|+..|+..
T Consensus 8 ~~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~-~~~~~~~~~c~~~ 85 (296)
T 2lnl_A 8 TLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV-NGWIFGTFLCKVV 85 (296)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH-SSSCCSSHHHHHH
T ss_pred chhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc-CCCccchhHHHHH
Confidence 3446778888999999999999999999999999999999999999999999876 5676665554 4699999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhHHHHHHHHhhhhhhhhccccccccccCCCcccccC-CCc
Q psy16862 118 NSFDVYFSTASILHLCCISVDRYYAIVKPLQYPIIMNQNTVLLMLSNVWILPGIISFTPIMLGWYTTPDHKQYRKH-HPN 196 (303)
Q Consensus 118 ~~~~~~~~~~s~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 196 (303)
.++...+..+|++++++||+|||+||++|++|+... +++...+++++|+++++.++|+.........+....+.. ...
T Consensus 86 ~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 164 (296)
T 2lnl_A 86 SLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQK-RHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLG 164 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCH-HHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCCS
T ss_pred hhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhh-hhhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeeeecc
Confidence 999999999999999999999999999999987754 456677888899999999988865443222222211111 111
Q ss_pred eEEEEehhhHHHHHhhhhhhhhhhHHHHHHHHHHHHHHH
Q psy16862 197 VCIFVVNVYYALISSSISFWIPGFVMKKKKKRKKKKKKK 235 (303)
Q Consensus 197 ~c~~~~~~~~~~~~~~~~~~ip~~i~~~~y~~I~~~l~~ 235 (303)
.........+......+.+++|+.++..+|..+.+.+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~ 203 (296)
T 2lnl_A 165 NDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFK 203 (296)
T ss_dssp CCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSS
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111223345667777888999999999999988765543
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.53 E-value=2.2e-08 Score=54.79 Aligned_cols=30 Identities=40% Similarity=0.869 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcccchh
Q psy16862 127 ASILHLCCISVDRYYAIVKPLQYPIIMNQN 156 (303)
Q Consensus 127 ~s~~~l~~iaidRy~aI~~P~~~~~~~t~~ 156 (303)
+|++++++||+|||+||++|++|....+.+
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 688999999999999999999988776654
No 20
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=95.72 E-value=0.00057 Score=42.96 Aligned_cols=29 Identities=17% Similarity=0.363 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q psy16862 43 IKGMLMCFIIITAILGNLLVIISVIKHRK 71 (303)
Q Consensus 43 ~~~~~~~~i~i~gl~~N~~vl~~i~~~~~ 71 (303)
+..+++.+++++|++||+++++++.+++.
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~ 58 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKG 58 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecc
Confidence 66788999999999999999999987664
No 21
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=87.33 E-value=2.8 Score=37.26 Aligned_cols=37 Identities=14% Similarity=-0.081 Sum_probs=20.2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q psy16862 35 HIHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRK 71 (303)
Q Consensus 35 ~~~~~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~ 71 (303)
........+...+..+++++|=+.-++++..-.+.+.
T Consensus 45 ~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~ 81 (502)
T 3odu_A 45 NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRS 81 (502)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 4444444555555556666666666666655544333
No 22
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=81.34 E-value=2.2 Score=23.22 Aligned_cols=28 Identities=18% Similarity=0.013 Sum_probs=17.3
Q ss_pred hhhhhHH-HHHHHHHHHHHHHHHHHhhhh
Q psy16862 216 WIPGFVM-KKKKKRKKKKKKKKKKKRKKK 243 (303)
Q Consensus 216 ~ip~~i~-~~~y~~I~~~l~~~~~~~~~~ 243 (303)
++|++++ ++.|..+++-.+|+++++++.
T Consensus 6 ~l~~v~~~~ifYFl~iRPQ~Kr~K~~~~m 34 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMILRPQQKRTKEHKKL 34 (37)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3444433 667788877777776666544
No 23
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=59.83 E-value=66 Score=27.68 Aligned_cols=37 Identities=11% Similarity=0.194 Sum_probs=21.4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q psy16862 35 HIHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRK 71 (303)
Q Consensus 35 ~~~~~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~ 71 (303)
........++..+..+++++|=+.-++++..-.+.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~ 50 (464)
T 4dkl_A 14 MVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKT 50 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCC
Confidence 3344455555566666666666666666665554433
No 24
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=59.26 E-value=75 Score=26.29 Aligned_cols=49 Identities=6% Similarity=0.008 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHhHHH
Q psy16862 40 PFIIKGMLMCFIIITAILGNLLVIISVIKHRKLRIITNYFVVSLAFADLLV 90 (303)
Q Consensus 40 ~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~~~~~~ll~~Lai~Dl~~ 90 (303)
+.....+...+..+++++|=+..++++.--.+.+.... ..++-+.++..
T Consensus 28 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~--~~~~~l~~Lai 76 (364)
T 2ks9_A 28 PAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRT--VTNYFLVNLAF 76 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCC--HHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--hHHHHHHHHHH
Confidence 35665666777888888888888888776555444333 23444444433
No 25
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=57.54 E-value=45 Score=29.61 Aligned_cols=39 Identities=10% Similarity=0.093 Sum_probs=25.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy16862 35 HIHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLR 73 (303)
Q Consensus 35 ~~~~~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~ 73 (303)
........+...+..+++++|=+.-++++..-.+.+...
T Consensus 179 ~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~ 217 (514)
T 3sn6_R 179 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVT 217 (514)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHH
T ss_pred chHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHH
Confidence 344445556666777778888888888777776655543
No 26
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=50.56 E-value=65 Score=27.63 Aligned_cols=31 Identities=16% Similarity=0.149 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy16862 43 IKGMLMCFIIITAILGNLLVIISVIKHRKLR 73 (303)
Q Consensus 43 ~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~ 73 (303)
+...+..+++++|=+.-++++..-.+.+...
T Consensus 13 ~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~ 43 (452)
T 3rze_A 13 VVLSTICLVTVGLNLLVLYAVRSERKLHTVG 43 (452)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCSTTCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccCChh
Confidence 4555666667777777777777766544433
No 27
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=44.81 E-value=1.5e+02 Score=25.42 Aligned_cols=33 Identities=27% Similarity=0.105 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q psy16862 39 FPFIIKGMLMCFIIITAILGNLLVIISVIKHRK 71 (303)
Q Consensus 39 ~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~ 71 (303)
.......++.++..+++++|=+..++++.--.+
T Consensus 29 ~~~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~ 61 (448)
T 2z73_A 29 VPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTK 61 (448)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHhhHHHhhhhhhh
Confidence 345566666666777777777777776665444
No 28
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=44.45 E-value=80 Score=28.00 Aligned_cols=33 Identities=6% Similarity=-0.136 Sum_probs=19.2
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16862 33 TIHIHIFPFIIKGMLMCFIIITAILGNLLVIIS 65 (303)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~i~i~gl~~N~~vl~~ 65 (303)
...+......+...++.+++++|=+.-+++++.
T Consensus 27 ~~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~ 59 (510)
T 4grv_A 27 TDIYSKVLVTAIYLALFVVGTVGNSVTLFTLAR 59 (510)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhheee
Confidence 444444444445555566777777766666653
No 29
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=38.51 E-value=1.2e+02 Score=25.93 Aligned_cols=42 Identities=5% Similarity=-0.035 Sum_probs=30.7
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy16862 32 STIHIHIFPFIIKGMLMCFIIITAILGNLLVIISVIKHRKLR 73 (303)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~i~i~gl~~N~~vl~~i~~~~~~~ 73 (303)
...........+..++..+++++|=+.-++++..-.+.+...
T Consensus 25 ~~~~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~ 66 (447)
T 4eiy_A 25 APPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVT 66 (447)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHH
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHH
Confidence 344556666777788888888899888888888777655543
No 30
>3arc_M Photosystem II reaction center protein M; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_M* 2axt_M* 3bz1_M* 3bz2_M* 3kzi_M* 3prq_M* 3prr_M* 3a0b_M* 3a0h_M*
Probab=31.32 E-value=49 Score=17.69 Aligned_cols=23 Identities=13% Similarity=0.251 Sum_probs=16.9
Q ss_pred HHHHhhhhhhhhhhHHHHHHHHH
Q psy16862 207 ALISSSISFWIPGFVMKKKKKRK 229 (303)
Q Consensus 207 ~~~~~~~~~~ip~~i~~~~y~~I 229 (303)
.++......++|.+..++.|++.
T Consensus 7 ~fiAt~Lfi~iPt~FLlilYvqT 29 (36)
T 3arc_M 7 GLIATALFVLVPSVFLIILYVQT 29 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhee
Confidence 34555667788998888888754
No 31
>3lcn_C MRNA transport factor GFD1; nuclear mRNA export, metal-binding, nucleus, RNA-binding, ZI finger, membrane, nuclear pore complex; 2.00A {Saccharomyces cerevisiae}
Probab=30.32 E-value=6.6 Score=19.47 Aligned_cols=13 Identities=38% Similarity=0.583 Sum_probs=7.5
Q ss_pred hhhhccccccccc
Q psy16862 289 KKNQHHRDVWQKK 301 (303)
Q Consensus 289 ~~~~~~~~~~~~~ 301 (303)
++=|+||++++++
T Consensus 13 KKIEEQr~i~~~~ 25 (29)
T 3lcn_C 13 KKIEEQREILQKT 25 (29)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 3446666666653
No 32
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=26.50 E-value=65 Score=17.29 Aligned_cols=16 Identities=6% Similarity=0.231 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHH
Q psy16862 44 KGMLMCFIIITAILGN 59 (303)
Q Consensus 44 ~~~~~~~i~i~gl~~N 59 (303)
..+++..++++|.+.|
T Consensus 11 vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 11 VVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHccccCC
Confidence 3344555566666655
Done!