Query psy16863
Match_columns 1075
No_of_seqs 632 out of 4152
Neff 10.4
Searched_HMMs 29240
Date Sat Aug 17 00:00:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16863.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16863hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dmk_A DOWN syndrome cell adhe 100.0 1.8E-73 6.3E-78 716.3 70.2 713 135-929 38-809 (816)
2 3b43_A Titin; I-SET IG fold, e 100.0 3.6E-70 1.2E-74 654.1 72.5 531 348-929 4-570 (570)
3 3dmk_A DOWN syndrome cell adhe 100.0 5.7E-70 2E-74 684.6 70.6 651 95-841 95-809 (816)
4 3b43_A Titin; I-SET IG fold, e 100.0 5.6E-68 1.9E-72 635.2 72.5 540 241-840 4-569 (570)
5 1e07_A Carcinoembryonic antige 100.0 5.1E-66 1.8E-70 630.3 71.2 608 247-928 4-639 (642)
6 1e07_A Carcinoembryonic antige 100.0 8.8E-65 3E-69 619.4 68.7 594 141-841 5-640 (642)
7 3v2a_R Vascular endothelial gr 100.0 3E-61 1E-65 603.0 16.4 623 241-933 30-760 (772)
8 3v2a_R Vascular endothelial gr 100.0 2.9E-60 1E-64 594.1 18.0 629 135-844 31-759 (772)
9 2ec8_A MAST/stem cell growth f 100.0 4.9E-49 1.7E-53 467.8 30.0 445 424-935 18-516 (524)
10 3qs9_E FL cytokine receptor; i 100.0 2.3E-46 7.9E-51 438.4 42.3 424 358-842 57-511 (527)
11 3qs9_E FL cytokine receptor; i 100.0 6.2E-46 2.1E-50 434.8 39.3 402 456-928 58-509 (527)
12 1z7z_I Intercellular adhesion 100.0 3.5E-46 1.2E-50 434.4 36.4 408 455-929 8-449 (450)
13 2ocw_A Polymeric-immunoglobuli 100.0 6E-45 2.1E-49 439.3 47.9 421 456-931 10-548 (585)
14 2ec8_A MAST/stem cell growth f 100.0 3.8E-46 1.3E-50 442.9 33.2 454 112-644 17-509 (524)
15 2ocw_A Polymeric-immunoglobuli 100.0 5.2E-44 1.8E-48 431.1 51.0 451 140-647 5-548 (585)
16 2rcj_C Light chain; immunoglob 100.0 5E-44 1.7E-48 424.5 42.5 437 355-829 6-512 (523)
17 1z7z_I Intercellular adhesion 100.0 2.5E-44 8.5E-49 418.7 38.0 414 354-841 4-449 (450)
18 2rcj_C Light chain; immunoglob 100.0 3.2E-43 1.1E-47 417.6 42.8 454 140-633 5-513 (523)
19 3qs7_E FL cytokine receptor; i 100.0 8.6E-44 2.9E-48 405.7 33.8 393 502-933 4-418 (423)
20 3kld_A Contactin 4, axcam, BIG 100.0 2.8E-40 9.7E-45 374.8 36.9 350 550-928 5-382 (384)
21 3qs7_E FL cytokine receptor; i 100.0 7.2E-41 2.4E-45 381.6 31.9 377 317-730 4-415 (423)
22 3kld_A Contactin 4, axcam, BIG 100.0 1.1E-40 3.9E-45 378.0 29.7 348 448-840 6-382 (384)
23 3laf_A Deleted in colorectal c 100.0 6.7E-39 2.3E-43 367.4 37.4 353 548-930 19-402 (403)
24 3laf_A Deleted in colorectal c 100.0 4.5E-39 1.5E-43 368.8 34.3 347 449-842 23-402 (403)
25 3p3y_A Neurofascin; IG domains 100.0 2.2E-39 7.5E-44 371.6 30.9 354 549-929 16-403 (404)
26 1bih_A Hemolin; insect immunit 100.0 7.2E-39 2.5E-43 366.0 30.5 360 549-927 5-394 (395)
27 1cs6_A Axonin-1; neural cell a 100.0 2.2E-38 7.6E-43 360.0 34.2 346 550-928 4-381 (382)
28 2v5m_A Dscam; neurobiology SPL 100.0 2.1E-38 7.2E-43 361.1 31.8 339 447-839 3-387 (388)
29 3p3y_A Neurofascin; IG domains 100.0 1.5E-38 5.2E-43 364.6 30.6 351 446-840 15-402 (404)
30 1cs6_A Axonin-1; neural cell a 100.0 1.7E-38 5.7E-43 361.0 30.3 348 447-840 4-381 (382)
31 1bih_A Hemolin; insect immunit 100.0 2.5E-38 8.7E-43 361.5 31.7 343 447-839 6-394 (395)
32 2v5m_A Dscam; neurobiology SPL 100.0 7.8E-38 2.7E-42 356.4 33.9 346 550-927 3-387 (388)
33 1qgc_4 Protein (immunoglobulin 100.0 1.6E-35 5.5E-40 343.3 29.0 350 553-925 4-435 (438)
34 1wio_A CD4, T-cell surface gly 100.0 1.6E-36 5.5E-41 341.5 17.2 315 559-928 3-362 (363)
35 2rik_A Titin; I-SET IG fold, p 100.0 3.8E-33 1.3E-37 302.5 38.9 268 348-643 4-282 (284)
36 2rik_A Titin; I-SET IG fold, p 100.0 7.8E-33 2.7E-37 300.0 38.1 279 134-440 4-283 (284)
37 1qgc_4 Protein (immunoglobulin 100.0 5.3E-34 1.8E-38 330.5 29.7 349 352-725 4-435 (438)
38 1wio_A CD4, T-cell surface gly 100.0 3E-34 1E-38 322.9 21.6 316 144-528 3-362 (363)
39 1igt_B IGG2A intact antibody - 100.0 7.1E-32 2.4E-36 312.6 29.2 357 557-916 7-432 (444)
40 2y25_A Myomesin; structural pr 100.0 1.2E-31 3.9E-36 296.1 27.0 292 134-442 6-316 (317)
41 2yd9_A Receptor-type tyrosine- 100.0 4.8E-31 1.7E-35 288.8 31.0 270 549-843 5-293 (304)
42 2yd9_A Receptor-type tyrosine- 100.0 4E-31 1.4E-35 289.5 30.3 273 347-646 4-292 (304)
43 1igt_B IGG2A intact antibody - 100.0 1.8E-31 6.2E-36 309.2 27.3 360 248-633 6-434 (444)
44 2y25_A Myomesin; structural pr 100.0 7.3E-32 2.5E-36 297.7 20.5 263 649-930 5-316 (317)
45 1qz1_A Neural cell adhesion mo 100.0 4.8E-30 1.6E-34 279.2 31.6 266 550-841 2-290 (291)
46 1hzh_H IGG, immunoglobulin hea 100.0 9.4E-31 3.2E-35 304.2 27.3 355 557-917 7-442 (457)
47 1hzh_H IGG, immunoglobulin hea 100.0 1.5E-30 5.1E-35 302.6 28.1 359 249-633 7-443 (457)
48 2wim_A N-CAM 2, NCAM2, neural 100.0 7.2E-30 2.5E-34 277.7 28.5 269 241-529 3-284 (291)
49 1qz1_A Neural cell adhesion mo 100.0 1E-29 3.6E-34 276.5 29.5 266 242-528 2-289 (291)
50 2wim_A N-CAM 2, NCAM2, neural 100.0 1.3E-29 4.5E-34 275.7 28.9 275 135-443 4-286 (291)
51 1iga_A IGA1; immunoglobulin; N 100.0 2.6E-29 9E-34 293.3 32.7 355 557-918 8-443 (475)
52 1igy_B IGG1 intact antibody MA 100.0 3.8E-32 1.3E-36 313.6 6.4 359 249-633 6-424 (434)
53 1iga_A IGA1; immunoglobulin; N 100.0 1.8E-28 6.1E-33 286.2 35.6 359 247-633 6-443 (475)
54 1ry7_B FGFR-3, fibroblast grow 100.0 2.8E-31 9.7E-36 295.2 9.3 273 659-933 17-331 (334)
55 2y23_A Myomesin; structural pr 100.0 2.1E-28 7.3E-33 269.2 29.8 271 358-636 10-304 (312)
56 2y23_A Myomesin; structural pr 100.0 1.6E-28 5.5E-33 270.1 28.5 273 144-440 10-311 (312)
57 2o26_X MAST/stem cell growth f 100.0 1.1E-28 3.6E-33 268.2 26.7 268 133-442 10-289 (290)
58 1igy_B IGG1 intact antibody MA 100.0 3.2E-31 1.1E-35 305.9 6.4 352 142-517 6-423 (434)
59 1itb_B Type 1 interleukin-1 re 100.0 1.7E-29 5.8E-34 278.2 17.6 247 661-928 16-313 (315)
60 2o26_X MAST/stem cell growth f 100.0 3.8E-28 1.3E-32 263.8 25.5 258 549-842 11-289 (290)
61 2oz4_A Intercellular adhesion 100.0 5.1E-28 1.7E-32 258.7 25.9 232 661-929 14-264 (265)
62 3oq3_B IFN-alpha/beta binding 100.0 1.5E-28 5.3E-33 271.9 22.5 244 661-927 40-328 (329)
63 3ejj_X Macrophage colony-stimu 100.0 1E-27 3.4E-32 260.5 27.6 274 135-442 4-282 (289)
64 1ry7_B FGFR-3, fibroblast grow 100.0 1.4E-29 4.8E-34 281.5 12.9 271 353-646 12-328 (334)
65 3rjd_A High affinity immunoglo 100.0 1.8E-27 6.2E-32 254.3 25.7 251 349-643 1-258 (262)
66 3mjg_X Beta-type platelet-deri 100.0 1.5E-27 5.2E-32 259.0 24.9 262 557-843 7-280 (289)
67 3oq3_B IFN-alpha/beta binding 100.0 3.1E-27 1E-31 261.4 27.0 259 555-839 34-328 (329)
68 4fom_A Poliovirus receptor-rel 100.0 4.3E-29 1.5E-33 274.0 11.7 260 559-844 8-303 (308)
69 1zvo_C Myeloma immunoglobulin 100.0 4.4E-26 1.5E-30 267.3 38.0 358 557-918 7-492 (512)
70 2wng_A Tyrosine-protein phosph 100.0 1.6E-27 5.3E-32 263.9 23.6 268 349-637 3-312 (327)
71 4dep_C Interleukin-1 receptor 100.0 4.4E-28 1.5E-32 271.2 19.0 268 557-841 14-333 (349)
72 4dep_C Interleukin-1 receptor 100.0 7.8E-28 2.7E-32 269.2 20.8 271 355-645 13-333 (349)
73 2wng_A Tyrosine-protein phosph 100.0 1.5E-27 5E-32 264.1 22.3 262 551-834 4-312 (327)
74 3o4o_C Interleukin-1 receptor 100.0 9.5E-29 3.2E-33 275.4 12.8 269 348-635 17-326 (339)
75 3rjd_A High affinity immunoglo 100.0 5.3E-27 1.8E-31 250.7 25.7 245 551-839 2-258 (262)
76 4fom_A Poliovirus receptor-rel 100.0 1.4E-28 4.7E-33 269.9 13.6 253 661-932 10-303 (308)
77 4fqp_A Poliovirus receptor; im 100.0 3.8E-27 1.3E-31 259.0 25.1 265 352-647 3-306 (313)
78 1zvo_C Myeloma immunoglobulin 100.0 2.1E-25 7E-30 261.6 40.7 366 249-633 7-492 (512)
79 3ejj_X Macrophage colony-stimu 100.0 7.2E-27 2.5E-31 253.7 26.0 261 242-529 4-281 (289)
80 4fqp_A Poliovirus receptor; im 100.0 1.3E-26 4.5E-31 254.7 27.2 270 246-529 4-304 (313)
81 2jll_A NCAM2, neural cell adhe 100.0 2.4E-25 8.2E-30 253.2 38.1 353 243-637 2-378 (389)
82 1itb_B Type 1 interleukin-1 re 99.9 8.3E-28 2.8E-32 264.7 16.7 261 249-528 12-313 (315)
83 2jll_A NCAM2, neural cell adhe 99.9 3.2E-25 1.1E-29 252.2 37.8 338 349-722 1-378 (389)
84 2nzi_A Titin; IG-domain, FNIII 99.9 7.1E-26 2.4E-30 248.0 30.9 270 347-638 2-284 (305)
85 4dkd_C Macrophage colony-stimu 99.9 2.6E-27 8.9E-32 257.6 18.8 276 134-443 3-283 (292)
86 3vh8_G Killer cell immunoglobu 99.9 2.3E-27 7.8E-32 261.0 18.2 256 347-633 22-297 (316)
87 3o4o_C Interleukin-1 receptor 99.9 2.2E-28 7.6E-33 272.4 9.8 272 549-840 17-334 (339)
88 3mjg_X Beta-type platelet-deri 99.9 1.1E-26 3.8E-31 252.1 20.2 264 351-646 2-279 (289)
89 3vh8_G Killer cell immunoglobu 99.9 1.4E-26 4.7E-31 254.8 18.8 282 115-430 4-297 (316)
90 4dkd_C Macrophage colony-stimu 99.9 1.7E-26 5.7E-31 251.2 19.3 264 241-530 3-282 (292)
91 3rbs_A Myomesin-1; immunoglobu 99.9 3.8E-26 1.3E-30 232.4 20.6 177 748-927 3-205 (207)
92 2oz4_A Intercellular adhesion 99.9 1E-25 3.5E-30 240.8 24.6 250 347-645 4-264 (265)
93 3u83_A Poliovirus receptor-rel 99.9 3.6E-26 1.2E-30 253.7 21.8 267 349-645 14-320 (331)
94 3u83_A Poliovirus receptor-rel 99.9 6.7E-26 2.3E-30 251.5 22.7 273 243-530 15-321 (331)
95 2j8h_A Titin, connectin; cardi 99.9 2.2E-25 7.6E-30 226.4 24.3 183 747-929 3-197 (197)
96 2nzi_A Titin; IG-domain, FNIII 99.9 5.3E-25 1.8E-29 241.1 27.6 262 241-522 3-283 (305)
97 2yd1_A Tyrosine-protein phosph 99.9 1.8E-24 6E-29 222.5 25.7 184 747-930 5-201 (212)
98 2yd6_A PTPRD protein; hydrolas 99.9 3E-24 1E-28 220.7 24.0 182 747-928 5-203 (212)
99 3lcy_A Titin; A-BAND, IG tande 99.9 6.2E-24 2.1E-28 215.7 23.5 181 747-929 6-196 (197)
100 2a38_A Titin; Z1Z2, structural 99.9 4.7E-24 1.6E-28 216.0 21.7 178 747-927 4-193 (194)
101 1za6_B IGG heavy chain; immuno 99.9 3E-24 1E-28 238.9 20.9 277 355-633 6-330 (344)
102 2wqr_A IG epsilon chain C regi 99.9 2.2E-24 7.7E-29 237.7 17.0 236 666-918 25-309 (323)
103 3rbs_A Myomesin-1; immunoglobu 99.9 1.9E-23 6.5E-28 212.3 21.0 176 349-527 3-205 (207)
104 2wqr_A IG epsilon chain C regi 99.9 6.7E-24 2.3E-28 233.9 16.8 267 348-633 6-309 (323)
105 2j8h_A Titin, connectin; cardi 99.9 1.2E-22 3.9E-27 206.3 24.1 182 347-528 2-196 (197)
106 2c5d_C AXL oncogene, tyrosine- 99.9 1.3E-22 4.3E-27 205.6 23.1 173 748-927 2-191 (195)
107 4fa8_A Secreted protein BARF1; 99.9 1.2E-23 4.2E-28 212.3 14.7 159 757-921 2-194 (203)
108 1za6_B IGG heavy chain; immuno 99.9 7.6E-23 2.6E-27 227.6 22.0 266 142-430 7-330 (344)
109 2va4_A NCAM2, N-CAM 2, neural 99.9 2.7E-22 9.1E-27 202.6 23.4 172 748-927 2-191 (192)
110 3lcy_A Titin; A-BAND, IG tande 99.9 1.9E-22 6.5E-27 204.7 21.8 181 348-529 6-196 (197)
111 2a38_A Titin; Z1Z2, structural 99.9 3.3E-22 1.1E-26 202.4 23.3 189 241-440 4-194 (194)
112 2yd1_A Tyrosine-protein phosph 99.9 7E-22 2.4E-26 203.0 25.8 183 347-529 4-200 (212)
113 3ojm_B Fibroblast growth facto 99.9 3.8E-23 1.3E-27 215.9 15.6 186 747-933 14-225 (231)
114 2v5t_A NCAM2, N-CAM 2, neural 99.9 1.5E-22 5E-27 204.0 19.2 175 748-928 2-187 (189)
115 2iep_A Muscle-specific kinase 99.9 1.1E-22 3.6E-27 205.6 18.0 176 747-930 6-191 (192)
116 1rhf_A Tyrosine-protein kinase 99.9 3.6E-22 1.2E-26 199.7 21.6 173 748-927 2-181 (182)
117 1epf_A NCAM, protein (neural c 99.9 5.8E-22 2E-26 200.0 23.0 175 748-927 2-189 (191)
118 2wv3_A Neuroplastin; igcam, me 99.9 9.5E-22 3.2E-26 198.1 24.5 169 747-928 2-189 (190)
119 3grw_A Fibroblast growth facto 99.9 1.1E-22 3.9E-27 213.8 18.5 186 747-933 10-222 (241)
120 2yd6_A PTPRD protein; hydrolas 99.9 1.6E-21 5.4E-26 200.3 24.7 181 348-528 5-203 (212)
121 3k0w_A Mucosa-associated lymph 99.9 3.5E-22 1.2E-26 206.1 19.5 177 742-928 12-201 (218)
122 2wv3_A Neuroplastin; igcam, me 99.9 3.8E-21 1.3E-25 193.7 26.6 171 651-841 3-190 (190)
123 2r15_A Myomesin-1; sarcomeric 99.9 3.8E-22 1.3E-26 205.2 19.3 168 762-930 16-211 (212)
124 2c5d_C AXL oncogene, tyrosine- 99.9 3.2E-21 1.1E-25 195.2 23.5 172 349-527 2-191 (195)
125 2v44_A NCAM2, neural cell adhe 99.9 3E-21 1E-25 194.3 22.0 170 751-927 5-185 (189)
126 2vr9_A Roundabout 1, ROBO; imm 99.9 3.3E-22 1.1E-26 206.5 15.1 181 746-930 7-207 (217)
127 4fa8_A Secreted protein BARF1; 99.9 1.6E-21 5.3E-26 196.8 18.2 172 251-433 2-194 (203)
128 2r15_A Myomesin-1; sarcomeric 99.9 7.5E-21 2.6E-25 195.4 23.3 189 253-442 4-211 (212)
129 1rhf_A Tyrosine-protein kinase 99.9 7.5E-21 2.6E-25 190.0 22.4 172 349-527 2-181 (182)
130 2va4_A NCAM2, N-CAM 2, neural 99.9 9.3E-21 3.2E-25 191.3 23.1 172 349-527 2-191 (192)
131 2v9r_A Roundabout homolog 1; p 99.9 2.3E-22 7.9E-27 206.8 11.1 183 747-933 8-206 (212)
132 3sgj_C Human FCG3A receptor; r 99.9 1.2E-21 3.9E-26 199.1 14.6 169 747-933 6-178 (204)
133 2iep_A Muscle-specific kinase 99.9 4.4E-21 1.5E-25 193.7 18.1 175 347-528 5-189 (192)
134 2v44_A NCAM2, neural cell adhe 99.9 1.6E-20 5.5E-25 188.9 21.8 170 352-527 5-185 (189)
135 1hng_A CD2; T lymphocyte adhes 99.9 1.8E-21 6.3E-26 192.3 13.2 155 758-927 6-174 (176)
136 3bp6_B Programmed cell death 1 99.9 4.6E-21 1.6E-25 195.2 16.3 171 754-929 8-193 (202)
137 2v5t_A NCAM2, N-CAM 2, neural 99.9 1.1E-20 3.7E-25 190.2 18.5 172 349-528 2-187 (189)
138 1f97_A Junction adhesion molec 99.9 3.8E-21 1.3E-25 197.6 15.5 171 749-928 2-206 (212)
139 1epf_A NCAM, protein (neural c 99.9 2.9E-20 1E-24 187.4 21.7 174 349-527 2-189 (191)
140 2ifg_A High affinity nerve gro 99.9 1.4E-21 4.7E-26 217.5 13.0 174 747-931 157-347 (347)
141 2d3v_A Leukocyte immunoglobuli 99.9 3.5E-21 1.2E-25 194.8 14.1 165 747-918 4-181 (196)
142 3p2t_A Leukocyte immunoglobuli 99.8 4E-21 1.4E-25 194.5 13.9 164 747-917 4-179 (196)
143 2c1o_A IGK-C protein; FAB frag 99.8 3.9E-21 1.3E-25 203.8 14.3 195 701-919 12-245 (254)
144 1uct_A Immunoglobulin alpha FC 99.8 4.6E-21 1.6E-25 196.7 13.9 178 747-928 8-197 (218)
145 1fnl_A Low affinity immunoglob 99.8 1.3E-20 4.6E-25 186.6 16.5 165 747-929 6-174 (175)
146 3jz7_A MCAR, CAR, coxsackievir 99.8 1E-20 3.6E-25 194.7 15.9 172 755-930 7-213 (214)
147 1f2q_A High affinity immunoglo 99.8 1E-20 3.4E-25 187.7 14.8 167 747-931 3-173 (176)
148 3grw_A Fibroblast growth facto 99.8 1.9E-20 6.5E-25 196.8 17.6 183 348-530 10-219 (241)
149 3k0w_A Mucosa-associated lymph 99.8 5.1E-20 1.8E-24 189.8 19.9 174 346-528 15-201 (218)
150 2c1o_A IGK-C protein; FAB frag 99.8 9.8E-21 3.4E-25 200.6 14.6 196 315-519 11-245 (254)
151 2fbo_J V1V2;, variable region- 99.8 7E-21 2.4E-25 201.4 13.0 172 754-927 8-250 (250)
152 3ojm_B Fibroblast growth facto 99.8 3.6E-20 1.2E-24 193.2 17.8 179 349-529 15-221 (231)
153 1ugn_A LIR1, leukocyte immunog 99.8 5.8E-21 2E-25 193.6 11.3 164 747-917 4-181 (198)
154 3s97_C Contactin-1; carbonic a 99.8 1.9E-20 6.4E-25 190.6 14.8 173 753-928 13-200 (201)
155 2x1w_L Vascular endothelial gr 99.8 2E-20 6.7E-25 192.1 14.8 169 755-931 14-209 (213)
156 1vca_A VCAM-D1,2, human vascul 99.8 1.9E-19 6.5E-24 182.3 21.5 164 759-931 12-199 (202)
157 3b5h_A Cervical EMMPRIN, HAB18 99.8 1.7E-19 6E-24 180.4 20.7 158 661-840 9-182 (184)
158 2vr9_A Roundabout 1, ROBO; imm 99.8 2.6E-20 9E-25 192.1 14.9 177 348-528 8-205 (217)
159 3sgj_C Human FCG3A receptor; r 99.8 5.2E-20 1.8E-24 186.8 16.2 165 348-529 6-174 (204)
160 3mj8_L Stimulatory hamster ant 99.8 7.4E-20 2.5E-24 188.1 17.2 170 751-923 4-207 (213)
161 2d3v_A Leukocyte immunoglobuli 99.8 4.9E-20 1.7E-24 186.3 15.5 165 348-518 4-181 (196)
162 3p2t_A Leukocyte immunoglobuli 99.8 5.1E-20 1.7E-24 186.3 15.6 164 348-517 4-179 (196)
163 2gi7_A GPVI protein; IG-like d 99.8 9.1E-21 3.1E-25 189.4 10.0 155 747-917 7-168 (184)
164 2v9r_A Roundabout homolog 1; p 99.8 5.1E-20 1.7E-24 189.2 15.3 178 348-529 8-202 (212)
165 4f80_A Butyrophilin subfamily 99.8 1.4E-19 4.8E-24 187.8 18.6 169 756-930 12-214 (226)
166 1f97_A Junction adhesion molec 99.8 8.9E-20 3E-24 187.3 16.7 171 350-528 2-206 (212)
167 3sbw_C Programmed cell death 1 99.8 2E-19 6.9E-24 186.2 19.4 171 756-931 9-213 (222)
168 2ny1_B T-cell surface glycopro 99.8 1.7E-20 5.8E-25 187.7 10.8 161 758-931 5-181 (184)
169 3b5h_A Cervical EMMPRIN, HAB18 99.8 2.1E-19 7.2E-24 179.8 18.7 155 758-928 8-182 (184)
170 3ry4_A Low affinity immunoglob 99.8 1.2E-19 4.3E-24 178.8 16.2 162 748-927 4-169 (170)
171 1oll_A NK receptor; immune sys 99.8 5.1E-20 1.8E-24 184.6 13.5 163 747-916 3-172 (188)
172 1nbq_A JAM, junctional adhesio 99.8 5.8E-21 2E-25 195.7 6.6 169 747-924 3-202 (209)
173 1fnl_A Low affinity immunoglob 99.8 2E-19 6.8E-24 178.1 17.1 165 347-528 5-173 (175)
174 1jbj_A CD3 epsilon and gamma e 99.8 2E-20 6.8E-25 187.0 8.9 145 760-919 11-179 (186)
175 1hnf_A CD2; T lymphocyte adhes 99.8 9.2E-20 3.2E-24 179.9 13.2 156 756-926 7-178 (182)
176 1uct_A Immunoglobulin alpha FC 99.8 9.9E-20 3.4E-24 186.7 13.8 164 348-516 8-180 (218)
177 2if7_A SLAM family member 6; N 99.8 4.7E-19 1.6E-23 178.2 17.8 160 755-922 5-185 (193)
178 3bp6_B Programmed cell death 1 99.8 3.9E-19 1.3E-23 180.9 17.4 169 355-528 8-192 (202)
179 3r4d_A CEA-related cell adhesi 99.8 4E-19 1.4E-23 181.8 17.6 164 757-928 8-199 (208)
180 3s97_C Contactin-1; carbonic a 99.8 2.9E-19 1E-23 181.7 16.3 175 352-528 11-200 (201)
181 3s96_B 3B5H10 FAB light chain; 99.8 3.9E-19 1.3E-23 183.4 17.0 171 750-923 3-214 (218)
182 1ugn_A LIR1, leukocyte immunog 99.8 1E-19 3.5E-24 184.4 12.0 164 348-517 4-181 (198)
183 1oll_A NK receptor; immune sys 99.8 3E-19 1E-23 179.0 14.6 163 348-516 3-172 (188)
184 1f2q_A High affinity immunoglo 99.8 3.9E-19 1.3E-23 176.2 15.3 165 348-529 3-171 (176)
185 1hng_A CD2; T lymphocyte adhes 99.8 1.1E-19 3.9E-24 179.4 11.0 156 358-527 5-174 (176)
186 2fbo_J V1V2;, variable region- 99.8 4E-19 1.4E-23 187.8 15.5 172 354-526 7-249 (250)
187 3d9a_L Light chain of hyhel10 99.8 4E-19 1.4E-23 182.5 14.8 167 751-920 4-204 (213)
188 1dr9_A B7-1 (CD80), T lymphocy 99.8 5.2E-19 1.8E-23 179.8 15.2 160 757-924 3-196 (201)
189 2pet_A Lutheran blood group gl 99.8 4.3E-19 1.5E-23 185.0 14.9 168 755-926 7-228 (231)
190 4frw_A Poliovirus receptor-rel 99.8 4.7E-19 1.6E-23 182.7 14.7 170 755-927 6-209 (218)
191 1nkr_A P58-CL42 KIR; inhibitor 99.8 4.5E-19 1.5E-23 180.0 14.1 163 747-916 7-184 (201)
192 2ifg_A High affinity nerve gro 99.8 2.8E-19 9.7E-24 198.7 13.6 192 319-528 136-344 (347)
193 3ry4_A Low affinity immunoglob 99.8 1.4E-18 4.8E-23 171.2 16.6 154 348-518 3-159 (170)
194 1vca_A VCAM-D1,2, human vascul 99.8 5.8E-18 2E-22 171.4 21.4 162 359-528 11-196 (202)
195 2gi7_A GPVI protein; IG-like d 99.8 2.2E-19 7.5E-24 179.3 10.7 155 348-517 7-168 (184)
196 3nl4_L Antigen binding fragmen 99.8 1.7E-18 5.8E-23 177.8 17.6 162 749-913 2-198 (213)
197 2x1w_L Vascular endothelial gr 99.8 1.2E-18 4.2E-23 178.6 16.2 180 248-443 13-209 (213)
198 3jz7_A MCAR, CAR, coxsackievir 99.8 6.8E-19 2.3E-23 181.0 14.3 170 355-528 6-211 (214)
199 3tv3_L PGT128 light chain, IG 99.8 8.7E-19 3E-23 179.7 14.7 163 757-923 9-205 (211)
200 1nbq_A JAM, junctional adhesio 99.8 1.8E-19 6.2E-24 184.5 9.5 167 349-523 4-201 (209)
201 3mj8_L Stimulatory hamster ant 99.8 1.4E-18 4.8E-23 178.5 16.0 171 351-523 3-207 (213)
202 1q0x_L FAB 9B1, light chain; a 99.8 2.3E-18 8E-23 176.6 17.2 166 755-922 7-208 (212)
203 1lk3_L 9D7 light chain; antige 99.8 1.8E-18 6.2E-23 177.1 15.8 162 755-919 7-202 (210)
204 1p6f_A NKP46, natural cytotoxi 99.8 1.4E-18 4.6E-23 180.9 15.0 180 747-933 6-195 (242)
205 1ccz_A Protein (CD58); LFA-3, 99.8 6.6E-19 2.2E-23 172.6 11.0 152 757-925 4-167 (171)
206 1mq8_A ICAM-1, intercellular a 99.8 9.2E-19 3.1E-23 185.0 12.5 248 660-932 9-285 (291)
207 1sy6_A T-cell surface glycopro 99.8 4.3E-19 1.5E-23 180.0 8.9 143 760-918 15-192 (204)
208 2ghw_B Anti-SARS SCFV antibody 99.8 9.4E-18 3.2E-22 176.7 19.4 165 756-920 10-232 (247)
209 2ny1_B T-cell surface glycopro 99.8 8.2E-19 2.8E-23 175.4 10.6 159 358-529 4-179 (184)
210 3mj6_A Junctional adhesion mol 99.8 1.3E-18 4.5E-23 186.0 12.7 182 748-936 5-244 (268)
211 2v5y_A Receptor-type tyrosine- 99.8 1.7E-15 5.8E-20 186.3 41.9 419 362-841 89-561 (731)
212 1c1e_H Catalytic antibody 1E9 99.8 2.2E-18 7.7E-23 177.7 13.2 168 756-925 8-216 (219)
213 1f3r_B FV antibody fragment; I 99.8 3.6E-18 1.2E-22 180.9 14.4 160 757-916 9-232 (257)
214 3r06_A Anti-mouse CD3epsilon a 99.8 9.4E-18 3.2E-22 172.3 17.0 167 749-918 2-202 (213)
215 3d9a_L Light chain of hyhel10 99.8 5.2E-18 1.8E-22 174.2 14.9 166 352-519 4-203 (213)
216 3s96_B 3B5H10 FAB light chain; 99.8 5.9E-18 2E-22 174.5 14.8 170 351-522 3-213 (218)
217 4frw_A Poliovirus receptor-rel 99.8 9.1E-18 3.1E-22 173.0 16.0 171 355-528 5-210 (218)
218 3nl4_L Antigen binding fragmen 99.7 9.8E-18 3.3E-22 172.1 16.0 162 350-513 2-198 (213)
219 1jbj_A CD3 epsilon and gamma e 99.7 1.5E-18 5.1E-23 173.3 9.6 146 360-519 10-179 (186)
220 1p6f_A NKP46, natural cytotoxi 99.7 9.7E-18 3.3E-22 174.4 15.8 176 348-529 6-191 (242)
221 1nfd_E H57 FAB; complex (immun 99.7 1.1E-18 3.9E-23 179.0 8.6 162 755-918 6-201 (212)
222 4f80_A Butyrophilin subfamily 99.7 4.2E-17 1.4E-21 169.1 20.6 186 250-441 12-213 (226)
223 4i0k_A CD276 antigen; immunogl 99.7 4.6E-19 1.6E-23 183.4 5.7 175 758-935 5-212 (222)
224 3sob_L Antibody light chain; b 99.7 1E-17 3.4E-22 175.4 15.7 172 748-922 24-229 (237)
225 1b6u_A KIR2DL3, P58 killer cel 99.7 2.8E-18 9.4E-23 179.9 11.0 178 747-931 6-203 (257)
226 4dzb_B Vbeta2 (MAIT T cell rec 99.7 9.2E-18 3.1E-22 176.7 15.1 169 751-919 4-221 (246)
227 1nkr_A P58-CL42 KIR; inhibitor 99.7 1.5E-17 5.1E-22 168.7 16.0 162 348-516 7-184 (201)
228 3r4d_A CEA-related cell adhesi 99.7 2.7E-17 9.1E-22 168.2 18.1 167 456-646 9-201 (208)
229 3knb_B Obscurin-like protein 1 99.7 6.7E-18 2.3E-22 150.0 11.6 97 746-843 11-107 (107)
230 1q0x_L FAB 9B1, light chain; a 99.7 2.1E-17 7.3E-22 169.4 17.0 167 352-520 4-206 (212)
231 2zg1_A Sialic acid-binding IG- 99.7 9.2E-18 3.2E-22 172.5 14.1 168 755-926 7-210 (214)
232 2pet_A Lutheran blood group gl 99.7 5.8E-18 2E-22 176.4 12.7 156 355-515 6-211 (231)
233 2p1y_A Bispecific alpha/beta T 99.7 1.5E-17 5.3E-22 174.0 16.0 165 751-916 3-222 (238)
234 3mj6_A Junctional adhesion mol 99.7 7.7E-18 2.6E-22 179.9 13.8 194 350-569 6-258 (268)
235 2dru_A Chimera of CD48 antigen 99.7 6.2E-18 2.1E-22 167.3 12.0 155 756-925 7-177 (180)
236 3pv7_A B7-H6, IG-like domain-c 99.7 3E-18 1E-22 180.6 10.3 169 754-927 9-224 (248)
237 2if7_A SLAM family member 6; N 99.7 6.8E-17 2.3E-21 162.3 19.3 160 356-522 5-185 (193)
238 1mq8_A ICAM-1, intercellular a 99.7 1.5E-17 5.2E-22 175.7 15.0 252 249-529 6-282 (291)
239 1hnf_A CD2; T lymphocyte adhes 99.7 8.7E-18 3E-22 165.7 12.3 156 357-526 7-178 (182)
240 3qib_D 2B4 beta chain; IG doma 99.7 9.2E-18 3.1E-22 179.3 13.3 192 702-918 5-244 (270)
241 1lk3_L 9D7 light chain; antige 99.7 2.1E-17 7.3E-22 169.1 15.2 162 356-519 7-202 (210)
242 2v5y_A Receptor-type tyrosine- 99.7 1.7E-15 5.8E-20 186.3 34.8 418 165-637 96-555 (731)
243 2xzc_L FAB A.17 light chain; i 99.7 2.9E-17 9.9E-22 168.9 15.1 163 755-920 7-206 (216)
244 1b6u_A KIR2DL3, P58 killer cel 99.7 3.4E-17 1.2E-21 171.5 15.7 216 446-688 6-240 (257)
245 2znx_A SCFV; fluorotryptohpan, 99.7 9.4E-17 3.2E-21 168.1 19.0 168 751-919 4-228 (242)
246 3tv3_L PGT128 light chain, IG 99.7 5.1E-17 1.8E-21 166.4 16.6 184 251-434 9-204 (211)
247 1nqb_A Single-chain antibody f 99.7 5.6E-17 1.9E-21 171.3 17.4 170 756-930 8-234 (256)
248 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 1.3E-17 4.6E-22 172.3 12.0 167 757-925 9-219 (222)
249 1moe_A Anti-CEA MAB T84.66; an 99.7 5.2E-17 1.8E-21 170.2 16.5 164 751-915 4-220 (240)
250 1c1e_H Catalytic antibody 1E9 99.7 4.1E-17 1.4E-21 168.2 15.2 167 355-523 6-214 (219)
251 2j6e_L IGM, FAB light chain; a 99.7 7.5E-18 2.6E-22 175.9 9.3 171 749-922 21-228 (234)
252 3r06_A Anti-mouse CD3epsilon a 99.7 7.5E-17 2.6E-21 165.5 16.5 167 350-518 2-202 (213)
253 3sbw_C Programmed cell death 1 99.7 2.9E-16 9.8E-21 162.3 21.0 186 249-444 8-214 (222)
254 3auv_A SC-DSFV derived from th 99.7 9.3E-17 3.2E-21 171.9 17.7 168 748-916 12-236 (276)
255 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 1.2E-16 4.2E-21 168.9 18.2 170 749-919 4-236 (256)
256 3mtr_A N-CAM-1, NCAM-1, neural 99.7 8.2E-17 2.8E-21 165.4 16.3 175 747-929 18-209 (215)
257 1qok_A MFE-23 recombinant anti 99.7 1.6E-16 5.5E-21 170.6 19.2 176 752-928 30-267 (282)
258 3d9a_H Heavy chain of hyhel10 99.7 2E-17 7E-22 169.2 11.3 164 756-922 8-207 (210)
259 3uzq_A Anti-dengue MAB 4E11; d 99.7 4.3E-17 1.5E-21 172.2 14.0 169 753-921 6-235 (253)
260 3sob_L Antibody light chain; b 99.7 1E-16 3.5E-21 167.6 16.5 169 349-519 24-226 (237)
261 3bkj_L WO2 IGG2A FAB fragment 99.7 6.4E-17 2.2E-21 170.8 14.9 169 748-919 34-241 (252)
262 2ghw_B Anti-SARS SCFV antibody 99.7 3.1E-16 1E-20 165.1 20.0 184 249-440 9-241 (247)
263 1mju_H Immunoglobulin MS6-12; 99.7 5.6E-17 1.9E-21 167.9 13.9 174 756-931 8-219 (227)
264 1f3r_B FV antibody fragment; I 99.7 2E-16 6.7E-21 167.4 18.5 185 249-441 7-245 (257)
265 1moe_A Anti-CEA MAB T84.66; an 99.7 2.4E-16 8.1E-21 165.1 18.9 164 351-514 3-219 (240)
266 1svz_A Immunoglobulin;, single 99.7 1.6E-16 5.6E-21 167.1 17.7 164 751-915 4-228 (247)
267 3esu_F Antibody 14B7* light ch 99.7 1.1E-16 3.8E-21 168.8 16.4 165 749-914 5-231 (250)
268 2znx_A SCFV; fluorotryptohpan, 99.7 2.7E-16 9.3E-21 164.6 18.8 165 351-515 3-222 (242)
269 3juy_B 3B3 single chain varian 99.7 1.4E-16 4.8E-21 168.6 16.8 172 747-918 5-245 (256)
270 3esu_F Antibody 14B7* light ch 99.7 2.5E-16 8.6E-21 166.1 18.7 165 350-514 5-231 (250)
271 1nfd_E H57 FAB; complex (immun 99.7 7.2E-18 2.5E-22 172.9 6.5 162 356-518 6-201 (212)
272 2rgs_A I, IG gamma-2B heavy ch 99.7 3.2E-17 1.1E-21 168.4 11.1 171 747-918 8-205 (218)
273 1nqb_A Single-chain antibody f 99.7 3.5E-16 1.2E-20 165.1 19.3 182 248-441 6-233 (256)
274 1dee_B IGM RF 2A2; FAB-IBP com 99.7 4E-16 1.4E-20 161.0 19.2 167 756-923 8-221 (223)
275 2vol_A Murine IGG FC; FC, zinc 99.7 2.9E-17 1E-21 167.3 10.5 167 750-917 4-196 (207)
276 3knb_B Obscurin-like protein 1 99.7 7.5E-17 2.6E-21 143.2 11.7 96 348-443 12-107 (107)
277 1pz5_B Heavy chain of FAB (SYA 99.7 1.4E-16 4.6E-21 164.4 15.4 167 756-924 8-216 (220)
278 3auv_A SC-DSFV derived from th 99.7 4.9E-16 1.7E-20 166.3 20.3 167 349-515 12-235 (276)
279 3gkz_A Anti-methamphetamine si 99.7 3.8E-16 1.3E-20 165.4 19.0 171 749-919 9-238 (257)
280 2fbj_H IGA-kappa J539 FAB (hea 99.7 2.1E-16 7.3E-21 162.6 16.3 163 757-920 9-212 (220)
281 1gsm_A Madcam-1, mucosal addre 99.7 4.1E-16 1.4E-20 154.9 17.6 120 758-890 17-143 (210)
282 1dr9_A B7-1 (CD80), T lymphocy 99.7 1.1E-16 3.8E-21 162.4 14.0 161 358-524 3-196 (201)
283 4i0k_A CD276 antigen; immunogl 99.7 3.4E-17 1.1E-21 169.4 10.2 171 357-530 3-207 (222)
284 1op3_H FAB 2G12, heavy chain; 99.7 1E-16 3.4E-21 165.8 13.7 162 757-920 9-216 (225)
285 2gjj_A A21 single-chain antibo 99.7 3.5E-16 1.2E-20 165.9 18.1 167 748-915 5-239 (264)
286 3ux9_B SCFV antibody; five hel 99.7 2.9E-16 9.9E-21 166.2 17.2 159 757-916 11-236 (256)
287 2j6e_L IGM, FAB light chain; a 99.7 6.2E-17 2.1E-21 168.9 11.6 164 356-520 26-226 (234)
288 1sy6_A T-cell surface glycopro 99.7 1.4E-17 4.9E-22 168.7 6.5 143 361-518 15-192 (204)
289 2zg1_A Sialic acid-binding IG- 99.7 2.4E-16 8.1E-21 161.9 15.7 169 354-526 5-210 (214)
290 3knb_A Titin; IG-like, titin, 99.7 1.6E-16 5.6E-21 139.2 12.1 93 747-840 4-98 (100)
291 3bqu_C 3H6 FAB light chain; be 99.7 8.4E-18 2.9E-22 175.3 4.5 168 748-918 23-224 (233)
292 1svz_A Immunoglobulin;, single 99.7 7E-16 2.4E-20 162.3 19.2 165 351-515 3-228 (247)
293 3juy_B 3B3 single chain varian 99.7 1E-15 3.6E-20 161.8 20.3 188 241-428 5-243 (256)
294 2p1y_A Bispecific alpha/beta T 99.7 4.3E-16 1.5E-20 162.9 17.0 164 352-516 3-222 (238)
295 2xzc_L FAB A.17 light chain; i 99.7 4.2E-16 1.4E-20 160.2 16.4 174 249-432 7-206 (216)
296 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 3.9E-16 1.3E-20 161.2 16.2 180 249-437 7-219 (222)
297 3pv7_A B7-H6, IG-like domain-c 99.7 3E-16 1E-20 165.2 15.6 165 355-524 9-219 (248)
298 3nfj_J T cell receptor beta ch 99.7 3.9E-16 1.3E-20 164.0 16.1 168 752-919 5-220 (245)
299 3uzq_A Anti-dengue MAB 4E11; d 99.7 5.4E-16 1.8E-20 163.7 17.0 197 246-442 5-245 (253)
300 1ccz_A Protein (CD58); LFA-3, 99.7 1E-16 3.4E-21 157.0 10.4 152 358-525 4-167 (171)
301 3ux9_B SCFV antibody; five hel 99.7 1E-15 3.5E-20 162.0 18.8 161 356-516 9-236 (256)
302 3qib_D 2B4 beta chain; IG doma 99.7 1.2E-16 4.1E-21 170.6 11.5 192 315-517 3-243 (270)
303 4ei6_B Vbeta16 XV19 type II na 99.7 3.8E-16 1.3E-20 164.1 15.2 169 749-918 3-219 (245)
304 1dn0_B IGM-kappa cold agglutin 99.7 1E-15 3.5E-20 158.9 18.1 172 756-928 8-226 (232)
305 3q5y_A TCR N15 beta; IG, T cel 99.7 3.7E-16 1.3E-20 163.6 15.0 168 750-918 4-213 (240)
306 3mtr_A N-CAM-1, NCAM-1, neural 99.7 1E-15 3.5E-20 157.1 18.0 174 348-528 18-208 (215)
307 3bkj_L WO2 IGG2A FAB fragment 99.7 3.4E-16 1.2E-20 165.1 14.5 168 349-518 34-240 (252)
308 1qok_A MFE-23 recombinant anti 99.7 1.6E-15 5.6E-20 162.7 19.5 185 247-440 31-267 (282)
309 2gjj_A A21 single-chain antibo 99.7 1.6E-15 5.5E-20 160.8 19.0 167 349-515 5-239 (264)
310 3nl4_H Antigen binding fragmen 99.7 4.1E-16 1.4E-20 160.1 13.9 168 756-926 7-211 (215)
311 4dzb_B Vbeta2 (MAIT T cell rec 99.7 3.5E-16 1.2E-20 164.5 13.5 168 351-518 3-220 (246)
312 3bae_H WO2 IGG2A FAB fragment 99.7 2.4E-16 8.4E-21 163.3 12.1 166 756-923 8-220 (228)
313 3umt_A SCFV heavy chain and li 99.7 2E-15 6.8E-20 159.7 19.4 193 250-442 10-246 (256)
314 1hxm_B Gamma-delta T-cell rece 99.7 8.4E-16 2.9E-20 160.8 16.2 176 750-927 3-227 (242)
315 3shs_A HOC head outer capsid p 99.7 2.2E-14 7.7E-19 141.6 25.1 236 354-628 7-278 (304)
316 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 1.4E-15 4.7E-20 160.8 17.9 168 350-518 4-235 (256)
317 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 9.1E-16 3.1E-20 163.4 16.4 168 747-915 14-254 (268)
318 3pl6_D MBP peptide / T-cell re 99.7 2.6E-16 8.8E-21 167.9 12.1 170 748-918 26-241 (268)
319 3d9a_H Heavy chain of hyhel10 99.7 5.5E-16 1.9E-20 158.5 13.8 175 249-433 7-206 (210)
320 1dee_B IGM RF 2A2; FAB-IBP com 99.7 4.7E-15 1.6E-19 152.9 20.8 166 356-522 7-220 (223)
321 1mju_H Immunoglobulin MS6-12; 99.7 9.9E-16 3.4E-20 158.4 15.5 171 356-528 7-216 (227)
322 2fbj_H IGA-kappa J539 FAB (hea 99.7 2.5E-15 8.7E-20 154.5 18.3 164 356-520 7-212 (220)
323 1pz5_B Heavy chain of FAB (SYA 99.6 1.2E-15 4E-20 157.3 15.7 167 355-523 6-215 (220)
324 3umt_A SCFV heavy chain and li 99.6 5.2E-15 1.8E-19 156.5 20.8 188 453-646 9-246 (256)
325 4fmk_A Poliovirus receptor-rel 99.6 1E-15 3.5E-20 158.4 15.0 180 250-441 9-217 (225)
326 1op3_H FAB 2G12, heavy chain; 99.6 1.1E-15 3.8E-20 157.9 14.8 162 356-519 7-215 (225)
327 4acp_A IG gamma-1 chain C regi 99.6 2E-16 7E-21 163.6 9.1 190 706-916 1-216 (240)
328 3m8o_H Immunoglobulin A1 heavy 99.6 1.7E-15 5.9E-20 156.2 15.9 162 757-920 9-214 (221)
329 3knb_A Titin; IG-like, titin, 99.6 1.1E-15 3.8E-20 133.8 12.0 93 348-440 4-98 (100)
330 3gkz_A Anti-methamphetamine si 99.6 5E-15 1.7E-19 156.7 19.5 184 245-428 11-235 (257)
331 2dru_A Chimera of CD48 antigen 99.6 6.9E-16 2.4E-20 152.5 11.6 153 357-524 7-176 (180)
332 1c5d_H Monoclonal antibody aga 99.6 8.3E-16 2.8E-20 157.6 12.6 166 756-923 8-210 (215)
333 1l6x_A Immunoglobulin gamma-1 99.6 3.3E-16 1.1E-20 159.5 9.6 156 761-917 16-196 (207)
334 1gsm_A Madcam-1, mucosal addre 99.6 7.1E-15 2.4E-19 145.9 18.7 148 359-518 17-194 (210)
335 3bqu_C 3H6 FAB light chain; be 99.6 8.3E-17 2.8E-21 167.8 4.8 167 349-517 23-223 (233)
336 3omz_A Human vdelta1 gamma del 99.6 9.8E-16 3.4E-20 162.4 13.0 168 748-915 2-231 (259)
337 2wbj_D OB TCR; transmembrane, 99.6 1.5E-15 5.2E-20 162.7 14.5 171 748-918 24-245 (279)
338 3eow_R Poliovirus receptor; im 99.6 4.4E-16 1.5E-20 160.7 9.8 167 356-527 6-210 (221)
339 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 5.1E-15 1.8E-19 157.6 18.3 167 349-515 15-254 (268)
340 2gki_A Nuclease; anti-DNA anti 99.6 2.1E-15 7.3E-20 162.4 15.2 164 755-918 29-260 (291)
341 3bae_H WO2 IGG2A FAB fragment 99.6 3.3E-15 1.1E-19 154.7 16.0 165 356-522 7-219 (228)
342 2xqy_G A13-D6.3 monoclonal ant 99.6 1.9E-15 6.7E-20 159.3 14.3 166 755-922 13-218 (261)
343 1g1c_A Immunoglobulin-like dom 99.6 3.2E-15 1.1E-19 131.5 13.3 95 747-841 4-98 (99)
344 1dn0_B IGM-kappa cold agglutin 99.6 1.1E-14 3.7E-19 151.0 19.6 172 355-527 6-225 (232)
345 1i1c_A IGG2A, IG gamma-2A chai 99.6 3.6E-16 1.2E-20 162.5 8.3 170 748-918 16-211 (239)
346 2vol_A Murine IGG FC; FC, zinc 99.6 9E-16 3.1E-20 156.2 11.1 165 352-517 5-196 (207)
347 2rgs_A I, IG gamma-2B heavy ch 99.6 6.9E-16 2.4E-20 158.5 10.2 169 348-517 8-204 (218)
348 3m8o_H Immunoglobulin A1 heavy 99.6 1E-14 3.5E-19 150.3 18.9 163 355-519 6-213 (221)
349 3nl4_H Antigen binding fragmen 99.6 4.1E-15 1.4E-19 152.6 15.5 190 248-438 5-211 (215)
350 2w59_A IGY FCU3-4; immunoglobu 99.6 4.7E-16 1.6E-20 161.2 8.3 168 748-918 12-217 (231)
351 3eow_R Poliovirus receptor; im 99.6 8.2E-16 2.8E-20 158.7 9.7 181 249-443 6-212 (221)
352 2kkq_A Myotilin; unknown funct 99.6 4.8E-15 1.6E-19 134.3 13.5 100 746-845 13-113 (116)
353 3bn9_D E2 FAB heavy chain; ant 99.6 2.2E-15 7.5E-20 158.1 12.8 164 757-922 9-223 (257)
354 4fmk_A Poliovirus receptor-rel 99.6 8.7E-15 3E-19 151.3 16.1 159 457-635 12-208 (225)
355 3nfj_J T cell receptor beta ch 99.6 9.6E-15 3.3E-19 153.3 15.5 167 352-518 4-219 (245)
356 1c5d_H Monoclonal antibody aga 99.6 1.5E-14 5E-19 148.2 15.7 165 356-522 7-209 (215)
357 3qp3_A Titin; I-SET IG-like, s 99.6 1.2E-14 4.1E-19 128.9 12.9 95 746-841 6-100 (103)
358 3q5y_A TCR N15 beta; IG, T cel 99.6 8.7E-15 3E-19 153.1 14.1 166 351-517 4-212 (240)
359 2xqy_G A13-D6.3 monoclonal ant 99.6 1.7E-14 5.8E-19 152.1 16.3 163 355-519 12-215 (261)
360 4ei6_B Vbeta16 XV19 type II na 99.6 9E-15 3.1E-19 153.6 14.2 167 350-517 3-218 (245)
361 3fku_X Neutralizing antibody F 99.6 2.1E-14 7.1E-19 153.7 17.2 186 249-443 7-252 (280)
362 3shs_A HOC head outer capsid p 99.6 9.3E-14 3.2E-18 137.3 20.2 234 557-825 9-278 (304)
363 2kdg_A Myotilin; immonoglobuli 99.6 6.9E-15 2.4E-19 129.7 10.9 95 747-841 4-98 (100)
364 3omz_A Human vdelta1 gamma del 99.6 5.4E-15 1.9E-19 156.6 12.1 166 349-514 2-230 (259)
365 2gki_A Nuclease; anti-DNA anti 99.6 1.7E-14 5.9E-19 155.3 15.9 172 249-428 29-258 (291)
366 3liz_H 4C3 monoclonal antibody 99.6 2.2E-14 7.6E-19 151.0 16.2 171 355-527 6-218 (253)
367 1waa_A Titin; metal binding pr 99.6 1.6E-14 5.3E-19 124.3 12.2 89 747-841 4-92 (93)
368 1hxm_B Gamma-delta T-cell rece 99.6 1.6E-14 5.6E-19 151.0 14.9 175 351-527 3-227 (242)
369 4acp_A IG gamma-1 chain C regi 99.6 2.5E-15 8.6E-20 155.3 8.1 189 321-516 1-216 (240)
370 2wbj_D OB TCR; transmembrane, 99.6 3.8E-14 1.3E-18 151.8 17.6 170 349-518 24-245 (279)
371 3bn9_D E2 FAB heavy chain; ant 99.6 1.7E-14 5.8E-19 151.3 14.4 163 355-519 6-220 (257)
372 1bec_A 14.3.D T cell antigen r 99.6 1.6E-14 5.4E-19 150.7 14.1 163 753-916 4-210 (238)
373 2yuz_A Myosin-binding protein 99.6 6.8E-15 2.3E-19 128.8 9.4 92 747-843 6-97 (100)
374 1u2h_A APEG-1, aortic preferen 99.6 2E-14 6.8E-19 126.4 12.5 95 747-841 4-98 (99)
375 3pl6_D MBP peptide / T-cell re 99.6 7.5E-15 2.6E-19 156.5 11.7 167 350-517 27-240 (268)
376 2cqv_A MLCK, myosin light chai 99.6 2.6E-14 8.7E-19 129.4 13.3 96 747-843 6-101 (114)
377 2w59_A IGY FCU3-4; immunoglobu 99.6 5.3E-15 1.8E-19 153.2 9.2 167 349-517 12-216 (231)
378 1l6x_A Immunoglobulin gamma-1 99.5 9.7E-15 3.3E-19 148.6 10.5 155 362-517 16-196 (207)
379 3fku_X Neutralizing antibody F 99.5 1E-13 3.5E-18 148.3 18.4 193 142-352 7-258 (280)
380 3o3u_N Maltose-binding peripla 99.5 1.3E-14 4.6E-19 173.7 12.7 155 757-918 375-566 (581)
381 1wit_A Twitchin 18TH IGSF modu 99.5 2.2E-14 7.7E-19 124.2 10.7 89 748-839 2-92 (93)
382 2dm2_A Palladin; beta-sandwich 99.5 1.5E-14 5.1E-19 130.0 9.7 97 747-843 7-104 (110)
383 2yuz_A Myosin-binding protein 99.5 2E-14 6.8E-19 125.8 10.2 94 347-444 5-98 (100)
384 3liz_H 4C3 monoclonal antibody 99.5 9.6E-14 3.3E-18 146.1 17.2 191 249-440 7-219 (253)
385 3puc_A Titin; I-SET IG-like do 99.5 5.8E-14 2E-18 123.4 13.0 94 747-841 5-98 (99)
386 1waa_A Titin; metal binding pr 99.5 4.7E-14 1.6E-18 121.3 11.8 90 347-441 3-92 (93)
387 1fhg_A Telokin; immunoglobulin 99.5 4.2E-14 1.5E-18 135.7 12.8 100 746-845 39-138 (154)
388 3to4_D NKT vbeta2 (mouse varia 99.5 2.1E-14 7.3E-19 151.3 11.6 160 755-916 8-217 (253)
389 1oga_E TRBC1, T-cell receptor 99.5 2E-14 6.9E-19 151.3 11.4 168 750-918 5-218 (252)
390 3irg_B Obscurin-like protein 1 99.5 4.2E-14 1.4E-18 126.4 11.6 95 747-842 12-106 (107)
391 1i1c_A IGG2A, IG gamma-2A chai 99.5 8.7E-15 3E-19 152.0 8.0 166 351-517 18-210 (239)
392 1ypz_F T-cell receptor gamma c 99.5 2E-14 6.8E-19 148.8 10.6 164 753-918 6-216 (230)
393 2cqv_A MLCK, myosin light chai 99.5 1.4E-13 4.7E-18 124.5 14.7 97 348-444 6-102 (114)
394 1he7_A High affinity nerve gro 99.5 7.5E-14 2.6E-18 125.2 12.3 93 747-843 3-101 (126)
395 2lu7_A Obscurin-like protein 1 99.5 1.7E-14 5.7E-19 121.0 7.3 82 755-842 3-84 (84)
396 3qp3_A Titin; I-SET IG-like, s 99.5 1.2E-13 4E-18 122.4 13.0 94 348-441 7-100 (103)
397 2dm3_A KIAA0992 protein, palla 99.5 2.1E-14 7.1E-19 129.2 8.0 97 747-843 8-104 (110)
398 1wwb_X Protein (brain derived 99.5 7.4E-14 2.5E-18 123.2 10.5 94 747-843 3-100 (103)
399 2lu7_A Obscurin-like protein 1 99.5 4.9E-14 1.7E-18 118.1 8.5 82 356-442 3-84 (84)
400 1ow0_A IG alpha-1 chain C regi 99.5 9.1E-15 3.1E-19 149.6 4.2 164 750-917 6-199 (214)
401 2bk8_A Connectin, M1, titin he 99.5 4.2E-13 1.4E-17 117.2 14.2 89 751-840 4-93 (97)
402 3puc_A Titin; I-SET IG-like do 99.5 2.5E-13 8.6E-18 119.3 12.9 94 348-441 5-98 (99)
403 2dav_A SLOW MYBP-C, myosin-bin 99.5 1.6E-13 5.6E-18 123.1 11.7 96 748-843 7-114 (126)
404 2e7c_A Myosin-binding protein 99.5 1.6E-13 5.4E-18 125.0 11.8 96 746-843 19-117 (118)
405 3irg_B Obscurin-like protein 1 99.5 1.7E-13 5.9E-18 122.4 11.7 96 348-443 12-107 (107)
406 1g1c_A Immunoglobulin-like dom 99.5 3.1E-13 1.1E-17 118.7 12.9 94 348-441 4-98 (99)
407 2lvc_A Obscurin-like protein 1 99.5 8.2E-14 2.8E-18 118.8 8.7 87 348-439 3-91 (91)
408 2aty_A Complement receptor chi 99.5 2.1E-13 7.1E-18 152.4 14.5 157 760-917 180-361 (376)
409 2lvc_A Obscurin-like protein 1 99.5 7.8E-14 2.7E-18 118.9 8.4 87 747-839 3-91 (91)
410 1nct_A Titin; cell adhesion, g 99.5 4.6E-14 1.6E-18 125.4 6.9 95 745-840 11-105 (106)
411 3irg_A Titin; IG-like, titin, 99.5 3E-13 1E-17 119.1 12.0 93 747-840 4-98 (100)
412 2edn_A Myosin-binding protein 99.5 1.2E-13 4.1E-18 122.5 9.1 96 747-842 11-117 (118)
413 3qhz_H Human monoclonal antibo 99.5 1.1E-12 3.8E-17 136.0 17.9 189 250-439 8-227 (232)
414 3o3u_N Maltose-binding peripla 99.5 9.3E-14 3.2E-18 166.4 11.1 156 357-518 374-566 (581)
415 2edj_A Roundabout homolog 2; K 99.5 1E-13 3.6E-18 122.0 8.6 93 746-842 6-99 (100)
416 2kkq_A Myotilin; unknown funct 99.5 3.7E-13 1.3E-17 121.8 12.4 99 348-446 14-114 (116)
417 3tv3_H PGT128 heavy chain, IG 99.5 6.7E-13 2.3E-17 138.2 16.0 170 355-526 6-234 (239)
418 3tv3_H PGT128 heavy chain, IG 99.5 6.7E-13 2.3E-17 138.2 15.7 190 249-439 7-235 (239)
419 3qhz_H Human monoclonal antibo 99.5 8.6E-13 2.9E-17 136.9 16.5 170 356-527 7-227 (232)
420 2yr3_A Myosin light chain kina 99.4 1.4E-13 4.8E-18 120.9 8.2 89 747-839 10-98 (99)
421 3cx2_A Myosin-binding protein 99.4 8E-13 2.7E-17 118.0 13.2 94 747-840 3-107 (108)
422 1wit_A Twitchin 18TH IGSF modu 99.4 3.5E-13 1.2E-17 116.6 10.6 89 349-439 2-92 (93)
423 1ypz_F T-cell receptor gamma c 99.4 3.2E-13 1.1E-17 139.7 12.2 164 353-518 5-216 (230)
424 2ckn_A Basic fibroblast growth 99.4 1.5E-13 5.3E-18 119.4 8.2 87 747-839 8-94 (95)
425 1bec_A 14.3.D T cell antigen r 99.4 1.1E-12 3.8E-17 136.6 16.4 173 247-430 4-212 (238)
426 3kvq_A Vascular endothelial gr 99.4 1E-13 3.5E-18 124.1 7.2 94 747-843 9-102 (108)
427 3u2s_H PG9 heavy chain; greek 99.4 6.9E-13 2.4E-17 138.6 14.7 191 248-439 5-236 (248)
428 3n9g_H FAB fragment of MAB CR4 99.4 5.9E-13 2E-17 137.8 14.0 169 757-929 9-225 (230)
429 1ypz_E T cell receptor delta, 99.4 1.2E-12 4.1E-17 132.7 15.5 159 752-920 5-200 (207)
430 1u2h_A APEG-1, aortic preferen 99.4 6.4E-13 2.2E-17 116.7 11.7 93 348-440 4-97 (99)
431 2eo9_A Roundabout homolog 1; b 99.4 3E-13 1E-17 123.2 9.8 94 747-844 7-101 (118)
432 2e6q_A Obscurin-like protein 1 99.4 7.7E-13 2.6E-17 116.7 12.0 92 348-444 7-108 (112)
433 2bk8_A Connectin, M1, titin he 99.4 1.6E-12 5.6E-17 113.4 14.0 90 352-441 4-94 (97)
434 1oga_E TRBC1, T-cell receptor 99.4 4E-13 1.4E-17 141.3 12.0 167 351-518 5-218 (252)
435 3to4_D NKT vbeta2 (mouse varia 99.4 7E-13 2.4E-17 139.6 13.6 182 248-430 7-219 (253)
436 2e6q_A Obscurin-like protein 1 99.4 6.7E-13 2.3E-17 117.1 11.0 91 747-843 7-107 (112)
437 2eny_A Obscurin; beta-sandwich 99.4 2.7E-13 9.2E-18 119.8 8.4 93 747-844 7-100 (104)
438 3caf_A Fibroblast growth facto 99.4 1.1E-13 3.9E-18 121.8 5.9 93 747-839 3-99 (100)
439 2eny_A Obscurin; beta-sandwich 99.4 3.8E-13 1.3E-17 118.8 8.9 93 348-444 7-100 (104)
440 3irg_A Titin; IG-like, titin, 99.4 1E-12 3.4E-17 115.7 11.6 93 348-440 4-98 (100)
441 2kdg_A Myotilin; immonoglobuli 99.4 8.8E-13 3E-17 116.0 11.2 95 348-442 4-99 (100)
442 2yuv_A Myosin-binding protein 99.4 1.4E-12 4.8E-17 114.5 12.4 91 747-843 6-97 (100)
443 3u2s_H PG9 heavy chain; greek 99.4 1.3E-12 4.6E-17 136.4 14.4 171 354-526 4-235 (248)
444 2dm2_A Palladin; beta-sandwich 99.4 9E-13 3.1E-17 118.3 11.2 98 347-444 6-105 (110)
445 2edh_A Obscurin; structural ge 99.4 5.1E-13 1.7E-17 120.5 9.4 90 747-843 18-107 (113)
446 1x44_A Myosin-binding protein 99.4 1.1E-12 3.7E-17 116.0 11.3 90 748-843 7-98 (103)
447 1nct_A Titin; cell adhesion, g 99.4 3.3E-13 1.1E-17 119.8 7.9 94 347-440 12-105 (106)
448 1gxe_A Myosin binding protein 99.4 4.3E-13 1.5E-17 124.5 8.8 85 755-840 25-138 (139)
449 2cr6_A KIAA1556 protein, obscu 99.4 6.5E-14 2.2E-18 126.8 3.1 94 747-844 12-105 (115)
450 3n9g_H FAB fragment of MAB CR4 99.4 6.3E-12 2.1E-16 130.0 18.3 188 250-440 8-224 (230)
451 2edh_A Obscurin; structural ge 99.4 8.3E-13 2.9E-17 119.1 10.0 104 332-444 5-108 (113)
452 2e7c_A Myosin-binding protein 99.4 1.8E-12 6.2E-17 117.9 12.1 95 348-443 20-117 (118)
453 2cry_A KIN of IRRE-like protei 99.4 3.8E-14 1.3E-18 130.0 0.9 97 746-843 12-115 (122)
454 2edj_A Roundabout homolog 2; K 99.4 1.5E-12 5.2E-17 114.4 10.7 93 347-442 6-99 (100)
455 2yuv_A Myosin-binding protein 99.4 2.7E-12 9.1E-17 112.7 12.2 91 348-443 6-97 (100)
456 3iu4_H CHP3 FAB heavy chain; a 99.4 1.8E-12 6E-17 136.7 13.0 167 757-927 9-222 (263)
457 2edf_A Obscurin; beta-sandwich 99.4 1E-12 3.5E-17 116.2 9.3 91 747-843 7-97 (103)
458 3m45_A Cell adhesion molecule 99.4 2.3E-12 7.9E-17 115.2 11.8 96 747-843 5-108 (108)
459 1iam_A ICAM-1, CD54, intercell 99.4 1.6E-11 5.4E-16 119.0 17.9 148 756-917 7-166 (185)
460 1x44_A Myosin-binding protein 99.4 2.1E-12 7.1E-17 114.2 10.8 91 349-444 7-99 (103)
461 2edf_A Obscurin; beta-sandwich 99.4 1.8E-12 6.2E-17 114.6 10.2 92 348-444 7-98 (103)
462 3iu4_H CHP3 FAB heavy chain; a 99.4 2.4E-12 8.3E-17 135.7 13.0 163 357-523 8-218 (263)
463 2edk_A Myosin-binding protein 99.4 3.3E-13 1.1E-17 118.9 5.2 90 747-842 7-100 (101)
464 2dlt_A Myosin binding protein 99.4 9.1E-13 3.1E-17 117.2 8.1 91 747-841 7-97 (106)
465 2dlt_A Myosin binding protein 99.4 1.8E-12 6.1E-17 115.3 10.0 92 347-441 6-97 (106)
466 1ypz_E T cell receptor delta, 99.4 3.3E-12 1.1E-16 129.4 13.1 158 352-519 4-199 (207)
467 2e6p_A Obscurin-like protein 1 99.4 1.9E-12 6.5E-17 114.7 9.7 92 747-844 6-100 (104)
468 2k1m_A Myosin-binding protein 99.4 3.2E-12 1.1E-16 111.0 10.9 88 747-840 7-94 (95)
469 1he7_A High affinity nerve gro 99.4 5.9E-12 2E-16 112.8 12.9 83 362-444 13-102 (126)
470 3mlr_H Human monoclonal anti-H 99.4 3.5E-12 1.2E-16 131.4 13.2 164 757-924 9-221 (226)
471 1wwc_A Protein (NT-3 growth fa 99.4 3.7E-12 1.3E-16 115.8 11.8 94 747-843 7-103 (118)
472 1fhg_A Telokin; immunoglobulin 99.4 4.7E-12 1.6E-16 121.3 12.9 97 348-444 40-137 (154)
473 2dm3_A KIAA0992 protein, palla 99.3 1.9E-12 6.6E-17 116.1 9.4 98 347-444 7-105 (110)
474 2edk_A Myosin-binding protein 99.3 6.6E-13 2.3E-17 116.9 5.9 90 348-442 7-100 (101)
475 1iam_A ICAM-1, CD54, intercell 99.3 3.6E-11 1.2E-15 116.5 18.6 151 356-517 6-166 (185)
476 3kvq_A Vascular endothelial gr 99.3 1.3E-12 4.3E-17 116.9 7.9 94 348-443 9-102 (108)
477 2ckn_A Basic fibroblast growth 99.3 2E-12 6.8E-17 112.3 8.8 88 347-439 7-94 (95)
478 2dav_A SLOW MYBP-C, myosin-bin 99.3 3.1E-12 1E-16 114.8 10.0 104 135-245 7-119 (126)
479 1pd6_A Cardiac MYBP-C;, myosin 99.3 3.4E-12 1.2E-16 112.5 10.2 89 746-840 13-103 (104)
480 1gxe_A Myosin binding protein 99.3 2.1E-12 7.2E-17 119.8 9.2 85 356-440 25-138 (139)
481 3sob_H Antibody heavy chain, l 99.3 9.7E-12 3.3E-16 131.0 15.3 167 357-527 31-249 (256)
482 3sob_H Antibody heavy chain, l 99.3 1.5E-11 5.1E-16 129.5 16.5 186 251-439 32-249 (256)
483 2edn_A Myosin-binding protein 99.3 2.9E-12 1E-16 113.6 9.1 95 348-442 11-117 (118)
484 2k1m_A Myosin-binding protein 99.3 5.1E-12 1.7E-16 109.6 10.6 88 348-440 7-94 (95)
485 1ow0_A IG alpha-1 chain C regi 99.3 7.2E-13 2.5E-17 135.4 6.0 176 245-430 7-200 (214)
486 2e6p_A Obscurin-like protein 1 99.3 3E-12 1E-16 113.5 9.3 92 348-444 6-100 (104)
487 2yr3_A Myosin light chain kina 99.3 2.9E-12 1E-16 112.4 9.0 89 348-439 10-98 (99)
488 1wwb_X Protein (brain derived 99.3 1E-11 3.4E-16 109.4 12.4 93 348-443 3-100 (103)
489 2eo9_A Roundabout homolog 1; b 99.3 4.5E-12 1.6E-16 115.3 10.5 95 347-444 6-101 (118)
490 2aty_A Complement receptor chi 99.3 7.1E-12 2.4E-16 140.0 14.1 170 254-430 180-362 (376)
491 3mlr_H Human monoclonal anti-H 99.3 2.8E-11 9.7E-16 124.6 17.1 182 250-434 8-219 (226)
492 2e7b_A Obscurin; IG-like domai 99.3 5.3E-12 1.8E-16 111.6 9.7 92 348-444 7-98 (103)
493 2v9t_A Roundabout homolog 1; s 99.3 2E-12 6.7E-17 117.5 6.9 97 746-842 7-110 (117)
494 3bfo_A Mucosa-associated lymph 99.3 7.3E-12 2.5E-16 107.7 10.1 82 748-839 3-85 (91)
495 1pd6_A Cardiac MYBP-C;, myosin 99.3 7.5E-12 2.6E-16 110.3 10.1 89 347-440 13-103 (104)
496 3cx2_A Myosin-binding protein 99.3 1.4E-11 4.8E-16 109.8 12.0 93 348-440 3-107 (108)
497 2cr6_A KIAA1556 protein, obscu 99.3 7.7E-13 2.6E-17 119.6 3.4 100 338-444 5-105 (115)
498 2e7b_A Obscurin; IG-like domai 99.3 3.8E-12 1.3E-16 112.5 7.7 91 747-843 7-97 (103)
499 2cr3_A Basic fibroblast growth 99.3 3.1E-12 1E-16 112.0 6.7 82 754-841 9-90 (99)
500 2dku_A KIAA1556 protein; beta- 99.3 1.1E-11 3.8E-16 109.5 10.5 91 747-843 7-97 (103)
No 1
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=1.8e-73 Score=716.33 Aligned_cols=713 Identities=21% Similarity=0.312 Sum_probs=539.2
Q ss_pred cccceeecce-eEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEee-CCCceeccCcEEEEecCCeEEEEEceeccCC
Q psy16863 135 APAFIRRLHD-IAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRA-QGDHPIFGNRFRAINRDGRTELNIRRVRRDD 212 (1075)
Q Consensus 135 ~p~~~~~~~~-~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 212 (1075)
+|.|+..+.+ +.+.+|++++|.|.+. |.|.+.+.|++ +|..+....+......++ +|.|.+++.+|
T Consensus 38 ~P~~~~~p~~~~~~~~g~~~~l~C~a~----------g~p~p~~~W~k~~g~~~~~~~~~~~~~~~g--~l~i~~~~~~~ 105 (816)
T 3dmk_A 38 GPVFLKEPTNRIDFSNSTGAEIECKAS----------GNPMPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAED 105 (816)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEE----------EESCCEEEEEETTSCBCCCBTTTBEECSTT--EEEECCCCGGG
T ss_pred CCcEEeCCCCeEEEECCCCeEEEeeec----------CCCCCEEEEEeCCCCCccCCCceEEEeeCC--cEEEcCCChHH
Confidence 4677776665 5688899998777664 45678999999 565443333333445555 69999998887
Q ss_pred ------CeEEEEEEEcCceeE-EEEEEEeeeccCCCCCccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeE
Q psy16863 213 ------GGRYSVTASNESGYS-TAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFS 285 (1075)
Q Consensus 213 ------~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~ 285 (1075)
+|.|+|.|.|..|.. +..+.|.+. .++.+...+.+..+.+|+.++|.|.+.+.. ......+.
T Consensus 106 ~~~~~d~G~Y~C~a~n~~G~~~S~~~~v~~~----~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~-------~~~~~~v~ 174 (816)
T 3dmk_A 106 YRQEVHAQVYACLARNQFGSIISRDVHVRAV----VAQYYEADVNKEHVIRGNSAVIKCLIPSFV-------ADFVEVVS 174 (816)
T ss_dssp CCHHHHEEEEEEEEEETTEEEEEEEEEEEEE----CCCCCCCBCCCEEEETTSCEEECCBCCHHH-------HTTEEEEE
T ss_pred ccccccceEEEEEEecCcceEEccceEEEEE----EccccEEEEecceEecCceEEEEECCCccc-------cccEEEEE
Confidence 899999999999986 455555543 235566677778899999999999764211 01125677
Q ss_pred EecCCCccc-----cCCCeEEEeeCCeEEEEEcccCCCCC-EEEEEEEEeCCee-EE---EEEEEEEecC-CCCCCeeee
Q psy16863 286 FRAQGDHPI-----FGNRFRAINRDGRTELNIRRVRRDDG-GRYSVTASNESGY-ST---AKFELSVESQ-VPDAPAFIR 354 (1075)
Q Consensus 286 w~~~~~~~~-----~~~~~~~~~~~~~~~L~I~~~~~~d~-G~Y~C~a~n~~g~-~~---~~~~l~V~~~-~~~~p~~~~ 354 (1075)
|++++.... ...++.+..++ .|.|.+++.+|+ |.|+|.|.|..+. .. ....+.|... ...+|.+..
T Consensus 175 W~~~~~~~~~~~~~~~~r~~~~~~g---~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~~~~~~~P~i~~ 251 (816)
T 3dmk_A 175 WHTDEEENYFPGAEYDGKYLVLPSG---ELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSAVPKVVS 251 (816)
T ss_dssp EEETTSCEECBSSCBTTTEEECTTS---CEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEECCCSCCCCBCCG
T ss_pred EEecCceEeccccCCCceEEEecCc---eEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeCCCCCCCCcccc
Confidence 887776543 24566554443 699999999998 9999999985432 11 1234555432 123455543
Q ss_pred ec--CceeeccCCeEEEEEEEecCCCcEEEEEECCEec------CCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 355 RL--HDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKL------EENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 355 ~~--~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l------~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
.. ....+.+|+.+.|.|.+.|.|.+.|+|+|++... ....+.. ..+. .|.|.+++.+|+|.|+|.|.|
T Consensus 252 ~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~--~~~~--~L~i~~v~~~D~G~Y~C~a~n 327 (816)
T 3dmk_A 252 LAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVK--QVSG--TLIIKDAVVEDSGKYLCVVNN 327 (816)
T ss_dssp GGGEEEEEECTTSCEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSSSEE--EETT--EEEECSCCGGGCEEEEEEEEC
T ss_pred ccCccceEEeCCCeEEEEEEeeecCCCeEEEEeCCCCCccCcceecCCceE--eccc--eEEECCCCHhHCEEEEEEEEc
Confidence 22 4567899999999999999999999999965322 2223322 1222 589999999999999999999
Q ss_pred CCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCCEEEEEeCCCCCCCcE
Q psy16863 427 AVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGDIFALTANPKDPSSLG 506 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~~~~l~i~~~~~~d~G 506 (1075)
..|.....+.|.|..++. ....+....+.+|+++.|.|.+.|.|.+.++|+|+|..+..+. ..|.|..+..+|+|
T Consensus 328 ~~g~~~~~~~l~V~~~~~----~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~-~~L~i~~v~~~d~G 402 (816)
T 3dmk_A 328 SVGGESVETVLTVTAPLS----AKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSE-SVLRIESVKKEDKG 402 (816)
T ss_dssp SSCEEEEEEEEEECEEEE----EEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCCS-SEEEESSCCGGGCE
T ss_pred CCCceEEEEEEEEcCCCc----eeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCCC-CEEEEcCCCHHHCE
Confidence 999888788888875432 1222333447899999999999999999999999999997654 46999999999999
Q ss_pred EEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEE
Q psy16863 507 TYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWY 586 (1075)
Q Consensus 507 ~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~ 586 (1075)
.|+|.|.|..|....+..+.|.. ...+|.+...+....+.+|+.++|.|.+.+.|.| .+.|+
T Consensus 403 ~Y~C~a~n~~g~~~~~~~l~v~~-----------------~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p-~v~W~ 464 (816)
T 3dmk_A 403 MYQCFVRNDRESAEASAELKLGG-----------------RFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTP-EISWE 464 (816)
T ss_dssp EEEEEEECSSCEEEECCEEECCC-----------------SSCCCEEEEECCCEEECSSSCEEEEEEEECSSCC-EEEEE
T ss_pred EEEEEEECCCCcEEEEEEEEEcc-----------------ccCCCceEecCcceEEcCCCCEEEEEEEecCCCC-EEEEE
Confidence 99999999999887777776642 1246677777788889999999999999999987 89999
Q ss_pred eCCeEEecCCcEEEE----EcCCceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEEeCCCCcCCCceeeccceee
Q psy16863 587 NKEGVVEASDKYHIM----ADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVM 662 (1075)
Q Consensus 587 ~~~~~i~~~~~~~~~----~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~ 662 (1075)
+++..+..+.++... .++.....|.|.++..+|+|.|+|.|.|..|... ....+.|..++ .+.......+
T Consensus 465 ~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p-----~~~~~~~~~v 538 (816)
T 3dmk_A 465 LDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAE-HSAKLNVYGLP-----YIRQMEKKAI 538 (816)
T ss_dssp ETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEE-EEEEEEECSSC-----EECCCCCEEE
T ss_pred ECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEE-EEEEEEEecCC-----eeEccCCeEE
Confidence 999998877776542 2333445799999999999999999999998865 34567776553 2222233456
Q ss_pred ecCCeEEEEEEEecCCCCeEEEEECCEEcCCCCe--------EEEee---cCCCceEEEEEEecCceE-EEEEEEEEEec
Q psy16863 663 TDDGLVSFECKVVGFPTPTLQWFKDNEELKPGDV--------YQLTG---TSSLGSYCCVAKNVMGKA-ESSTQLTIEDI 730 (1075)
Q Consensus 663 ~~g~~~~l~C~v~g~p~p~v~W~k~g~~l~~~~~--------~~~~~---~~d~G~Y~C~a~N~~g~~-~~~~~l~V~~~ 730 (1075)
..|+.+.|.|.+.|.|.+.+.|+|+|..+..+.+ +.+.. .+|+|.|+|.|.|..|.. ...+.+.|..
T Consensus 539 ~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~- 617 (816)
T 3dmk_A 539 VAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMV- 617 (816)
T ss_dssp ETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEEC-
T ss_pred ecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEec-
Confidence 7899999999999999999999999998865443 33433 258999999999999954 3456666653
Q ss_pred cccCchhhhhhhccCCCCCeEEe-ccceeeeecCCeEEEEEEEecCCCC-eEEEEECCEEeecCCcEEEEEeeCcEEEEE
Q psy16863 731 RNHLSEEDKLLLLTNNKAPKFIE-GLKSCQATVNEEFKFTVQVSISPEP-KVSWFRDDQQVVESDNVKILKETLGVCHLK 808 (1075)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~g~~~~l~C~v~g~p~p-~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~ 808 (1075)
+|.+.. ......+..|+.+.|.|.+.+.|.| .|+|+|+|+++..+.++.+.........|.
T Consensus 618 -----------------~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~ 680 (816)
T 3dmk_A 618 -----------------LPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLT 680 (816)
T ss_dssp -----------------CCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEE
T ss_pred -----------------CCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEE
Confidence 343332 2345568899999999999876654 999999999998777776665555678999
Q ss_pred EccccCCCCeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecc-eeecCCCeEEEEEEEEccCCCeeEEEECCEEc
Q psy16863 809 IHALEVADQAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELK-AVLSEGGAVNLECKVIGVPQPTLKWFKDGREL 887 (1075)
Q Consensus 809 I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l 887 (1075)
|.+++.+|+|.|+|.|.|..|....++.|.|..||. +...+. ..+.+|+.++|.|.+.|.|.|.|+|+|+|..+
T Consensus 681 i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~-----~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~ 755 (816)
T 3dmk_A 681 IEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPR-----WILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDT 755 (816)
T ss_dssp EESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEE-----EEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSS
T ss_pred EccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCc-----eeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCC
Confidence 999999999999999999999999999999987653 333333 34778999999999999999999999987544
Q ss_pred CC-------CCe-----eEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEec
Q psy16863 888 KA-------GDI-----HKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFE 929 (1075)
Q Consensus 888 ~~-------~~~-----~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 929 (1075)
.. +.. ..|.+......|+|.|+|.|.|.+|++.+++.+..+.
T Consensus 756 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~v~~~~~~ 809 (816)
T 3dmk_A 756 PGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQ 809 (816)
T ss_dssp TTCCBCCCCBTTEEEETTEEEECSCCGGGCEEEEEEEECSSSSCEEEEEEEEEE
T ss_pred CccccccccCCCEEecCCEEEECcCChhhCeEEEEEEEeCCCCCcEEEEEEEee
Confidence 32 111 1467777888999999999999999999999887654
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=3.6e-70 Score=654.15 Aligned_cols=531 Identities=26% Similarity=0.495 Sum_probs=451.4
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.||.|+.++.++.+.+|+.++|.|.+.|.|.+.|+|||||..|..+.++.+...+....|.|.++..+|+|.|+|.|.|.
T Consensus 4 ~pP~f~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (570)
T 3b43_A 4 EPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENS 83 (570)
T ss_dssp CCCEEEECCCCEEECTTSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCcceEECCceEEcCCCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeC
Confidence 58999999999999999999999999999999999999999998888888887788889999999999999999999999
Q ss_pred CCceeeEEEEEeecCCCCCCCeeeeecceE-EecCCeEEEEEEEECCCCCeEEEEeCCEeccCCC---------EEEEEe
Q psy16863 428 VGRSHCSCELSVLVPKAYKAPFFTKELEAI-LTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGD---------IFALTA 497 (1075)
Q Consensus 428 ~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~-~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~---------~~~l~i 497 (1075)
.|....++.|.|... ..+|.+...+... +.+|+++.|.|.+.|.|++.|+|+|||+.+..+. ...|.|
T Consensus 84 ~g~~~~~~~l~v~~~--~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i 161 (570)
T 3b43_A 84 VGAVASSAVLVIKER--KLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQI 161 (570)
T ss_dssp TEEEEEEEEEEECCC--CCCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEE
T ss_pred CceEEEEEEEEECCC--CCCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEE
Confidence 998887777777543 2345565554443 6789999999999999999999999999987543 246889
Q ss_pred CCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecC
Q psy16863 498 NPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVP 577 (1075)
Q Consensus 498 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~ 577 (1075)
..+..+|+|.|+|.|.|..|....++.+.|... ..||.+...+....+.+|+.++|.|.+.|.
T Consensus 162 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~-----------------~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~ 224 (570)
T 3b43_A 162 LQTDQSHVGQYNCSASNPLGTASSSAKLTLSEH-----------------EVPPFFDLKPVSVDLALGESGTFKCHVTGT 224 (570)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC-----------------CCCCEEEECCCCBCCBSBSCEEEEEEEESS
T ss_pred CcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCC-----------------CCCCccccCCceeEecCCCeEEEEEEEEEC
Confidence 999999999999999999999988888888631 245677777778889999999999999999
Q ss_pred CCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEEeCCCCcCCCceeec
Q psy16863 578 PWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVES 657 (1075)
Q Consensus 578 p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~ 657 (1075)
|.| .++|++++..+..+.++.+...+ +...|.|.+++.+|+|.|+|.|.|..|... ....|.|..| |.+...
T Consensus 225 p~p-~i~W~k~g~~i~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~-~~~~l~V~~~-----p~~~~~ 296 (570)
T 3b43_A 225 API-KITWAKDNREIRPGGNYKMTLVE-NTATLTVLKVTKGDAGQYTCYASNVAGKDS-CSAQLGVQEP-----PRFIKK 296 (570)
T ss_dssp SCC-EEEEEETTEECCTTSSEEEEEET-TEEEEEESSBCGGGCEEEEEEEEETTEEEE-EEEEECCBCC-----CEEEEC
T ss_pred CCC-EEEEEECCEECcCCCcEEEEEEC-CEEEEEEcccCcccCEEEEEEEECCCCcEE-EEEEEEeecC-----Cccccc
Confidence 877 89999999999888777765443 346899999999999999999999999865 3345666554 445443
Q ss_pred cc--eeeecCCeEEEEEEEecCCCCeEEEEECCEEcCCCCeEEEe-------------ecCCCceEEEEEEecCceEEEE
Q psy16863 658 LK--AVMTDDGLVSFECKVVGFPTPTLQWFKDNEELKPGDVYQLT-------------GTSSLGSYCCVAKNVMGKAESS 722 (1075)
Q Consensus 658 ~~--~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~l~~~~~~~~~-------------~~~d~G~Y~C~a~N~~g~~~~~ 722 (1075)
+. ..+.+|+.+.|.|.+.|.|.|.++|+|+|..+..+.++.+. ..+|+|.|+|.|.|..|....+
T Consensus 297 ~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~ 376 (570)
T 3b43_A 297 LEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSS 376 (570)
T ss_dssp CCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEE
T ss_pred CCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEE
Confidence 32 24678999999999999999999999999999877655432 2368999999999999999999
Q ss_pred EEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeC
Q psy16863 723 TQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETL 802 (1075)
Q Consensus 723 ~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~ 802 (1075)
+.|.|. .+|.|...+....+..|+.+.|.|.+.|.|.|.|+|+|+|.++..+.++.+... +
T Consensus 377 ~~l~V~------------------~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~-~ 437 (570)
T 3b43_A 377 TSLKVK------------------EPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSE-N 437 (570)
T ss_dssp EEECEE------------------CCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEE-T
T ss_pred EEEEec------------------CCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEc-C
Confidence 999997 588888888888889999999999999999999999999999998888887654 3
Q ss_pred cEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeeccee-ecCCCeEEEEEEEEccCCCeeEEE
Q psy16863 803 GVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELKAV-LSEGGAVNLECKVIGVPQPTLKWF 881 (1075)
Q Consensus 803 ~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~-~~~g~~~~L~C~v~g~p~p~v~W~ 881 (1075)
....|.|.+++.+|+|.|+|.|.|.+|.+..++.|.|..| |.|...+... +.+|+.+.|.|.+.|.|.|.|+|+
T Consensus 438 ~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~-----P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~ 512 (570)
T 3b43_A 438 FLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAP-----PRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWF 512 (570)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCC-----CEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEE
T ss_pred CEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccC-----CcccccCCCceecCCCeEEEEEEEecCCCCEEEEE
Confidence 4678999999999999999999999999998888888754 5566555544 678999999999999999999999
Q ss_pred ECCEEcC-CC---------CeeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEec
Q psy16863 882 KDGRELK-AG---------DIHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFE 929 (1075)
Q Consensus 882 k~g~~l~-~~---------~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 929 (1075)
|||.++. .+ ....|.+......|+|.|+|.|.|.+|.+++++.|.|+|
T Consensus 513 k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~e 570 (570)
T 3b43_A 513 KDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVLE 570 (570)
T ss_dssp ETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCBC
T ss_pred eCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEeC
Confidence 9986653 22 235677777788899999999999999999999998864
No 3
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=5.7e-70 Score=684.59 Aligned_cols=651 Identities=20% Similarity=0.329 Sum_probs=500.0
Q ss_pred EEEEcccccCC------CeEEEEEEEcCCeeE-EEEEEEEEeecCCCcccceeecceeEEeeCCeEEEEEEecCCCeeEE
Q psy16863 95 ELNIRRVRRDD------GGRYSVTASNESGYS-TAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKC 167 (1075)
Q Consensus 95 ~L~I~~~~~~d------~G~Y~c~a~n~~g~~-~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~~~l~c~~~~~~~~~c 167 (1075)
+|.|.++..+| +|.|+|.|.|..|.. +..+.|.+.. ++.+...+.+..+.+|++++|.|.+.+..
T Consensus 95 ~l~i~~~~~~~~~~~~d~G~Y~C~a~n~~G~~~S~~~~v~~~~----~~~~~~~~~~~~v~~G~~v~L~C~~~~~~---- 166 (816)
T 3dmk_A 95 KLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVV----AQYYEADVNKEHVIRGNSAVIKCLIPSFV---- 166 (816)
T ss_dssp EEEECCCCGGGCCHHHHEEEEEEEEEETTEEEEEEEEEEEEEC----CCCCCCBCCCEEEETTSCEEECCBCCHHH----
T ss_pred cEEEcCCChHHccccccceEEEEEEecCcceEEccceEEEEEE----ccccEEEEecceEecCceEEEEECCCccc----
Confidence 58899988886 999999999999976 4455554432 23455566678899999999999764321
Q ss_pred EEccCCCeeEEEeeCCCcee-----ccCcEEEEecCCeEEEEEceeccCCC-eEEEEEEEcCcee-EE---EEEEEeeec
Q psy16863 168 QFDLNNTIPFSFRAQGDHPI-----FGNRFRAINRDGRTELNIRRVRRDDG-GRYSVTASNESGY-ST---AKFELSVES 237 (1075)
Q Consensus 168 ~~~~~~~~~~~W~~~~~~~~-----~~~~~~~~~~~~~~~L~I~~~~~~D~-G~Y~C~a~n~~g~-~~---~~~~l~V~~ 237 (1075)
..+.+.+.|++++.... ..+|+.+. .++ .|.|.+++.+|+ |.|+|.|.|..+. .. ....|.|..
T Consensus 167 ---~~~~~~v~W~~~~~~~~~~~~~~~~r~~~~-~~g--~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~ 240 (816)
T 3dmk_A 167 ---ADFVEVVSWHTDEEENYFPGAEYDGKYLVL-PSG--ELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITE 240 (816)
T ss_dssp ---HTTEEEEEEEETTSCEECBSSCBTTTEEEC-TTS--CEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEEC
T ss_pred ---cccEEEEEEEecCceEeccccCCCceEEEe-cCc--eEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeC
Confidence 11226789999887654 35566553 344 699999999999 9999999975432 21 223455543
Q ss_pred cCC-CCCccccc--cccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCccc------cCCCeEEEeeCCeE
Q psy16863 238 QVP-DAPAFIRR--LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPI------FGNRFRAINRDGRT 308 (1075)
Q Consensus 238 ~~~-~~p~~~~~--~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~~------~~~~~~~~~~~~~~ 308 (1075)
... .+|.+... +....+.+|+.++|.|.+.+ .+.+.+.|++++.... ...++. ... .
T Consensus 241 ~~~~~~P~i~~~~~~~~~~v~~g~~v~L~C~~~g----------~p~p~v~W~k~~~~~~~~~~~~~~~~~~--~~~--~ 306 (816)
T 3dmk_A 241 PISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQG----------YPVPVFRWYKFIEGTTRKQAVVLNDRVK--QVS--G 306 (816)
T ss_dssp CCSCCCCBCCGGGGEEEEEECTTSCEEECCCCBC----------SSCCEEEEEEECTTSSCEEECCCSSSEE--EET--T
T ss_pred CCCCCCCccccccCccceEEeCCCeEEEEEEeee----------cCCCeEEEEeCCCCCccCcceecCCceE--ecc--c
Confidence 221 23444322 24567889999999887654 4556777876432211 122222 122 2
Q ss_pred EEEEcccCCCCCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCE
Q psy16863 309 ELNIRRVRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDR 388 (1075)
Q Consensus 309 ~L~I~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~ 388 (1075)
+|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.. +|.+...+....+.+|++++|.|.+.|.|.+.++|+|||.
T Consensus 307 ~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~----~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~ 382 (816)
T 3dmk_A 307 TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTA----PLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGK 382 (816)
T ss_dssp EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECE----EEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTE
T ss_pred eEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcC----CCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCE
Confidence 799999999999999999999999888888888874 6666667788899999999999999999999999999999
Q ss_pred ecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecc-eEEecCCeEEEE
Q psy16863 389 KLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELE-AILTEQGTVSLE 467 (1075)
Q Consensus 389 ~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~v~l~ 467 (1075)
.+..+.. .|.|.+++.+|+|.|+|.|.|..|....+..+.|... ..+|.+...+. ..+.+|+.+.|.
T Consensus 383 ~~~~~~~----------~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~--~~~p~i~~~~~~~~v~~G~~v~L~ 450 (816)
T 3dmk_A 383 AIGHSES----------VLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGR--FDPPVIRQAFQEETMEPGPSVFLK 450 (816)
T ss_dssp ECSCCSS----------EEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCS--SCCCEEEEECCCEEECSSSCEEEE
T ss_pred ECCCCCC----------EEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccc--cCCCceEecCcceEEcCCCCEEEE
Confidence 9865432 4899999999999999999999998777777766542 34556655444 347899999999
Q ss_pred EEEECCCCCeEEEEeCCEeccCCCE--------------EEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccc
Q psy16863 468 CKVMGIPTPQLIWYKDNKKIKAGDI--------------FALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSF 533 (1075)
Q Consensus 468 C~~~g~p~~~v~W~~~g~~l~~~~~--------------~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~ 533 (1075)
|.+.|.|.+.++|+++|..+..+.+ ..|.|..+..+|+|.|+|.|.|..|....++.|.|...
T Consensus 451 C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~--- 527 (816)
T 3dmk_A 451 CVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGL--- 527 (816)
T ss_dssp EEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSS---
T ss_pred EEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecC---
Confidence 9999999999999999999876543 25889999999999999999999999999999988632
Q ss_pred cCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEe
Q psy16863 534 LDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEIN 613 (1075)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~ 613 (1075)
| +...+....+.+|+.++|.|.+.+.|.+ .+.|++++..+....+..+..++ +|.|.
T Consensus 528 -----------------p-~~~~~~~~~v~~G~~v~l~C~~~g~p~~-~i~W~k~~~~l~~~~~~~~~~~~----~l~i~ 584 (816)
T 3dmk_A 528 -----------------P-YIRQMEKKAIVAGETLIVTCPVAGYPID-SIVWERDNRALPINRKQKVFPNG----TLIIE 584 (816)
T ss_dssp -----------------C-EECCCCCEEEETTCCEEEECCEECSSEE-EEEEEETTEESCCSTTEEECTTS----EEEES
T ss_pred -----------------C-eeEccCCeEEecCCeEEEEEEecCCCCC-EEEEEECCeEcccCCceEEecCC----eEEEE
Confidence 2 2233455678899999999999998866 89999999998877776665444 79999
Q ss_pred eee-ecCCceEEEEEECCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEEecCCCC-eEEEEECCEEc
Q psy16863 614 YLE-AVDDGEWKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKVVGFPTP-TLQWFKDNEEL 691 (1075)
Q Consensus 614 ~~~-~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v~g~p~p-~v~W~k~g~~l 691 (1075)
++. .+|+|.|+|.|.|..|........+.|..++...... .....+..|+.++|.|.+.+.|.+ .++|+|+|..+
T Consensus 585 ~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~---~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l 661 (816)
T 3dmk_A 585 NVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFA---FEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAI 661 (816)
T ss_dssp SCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCC---CCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCC
T ss_pred ecCccccCEEEEEEEEECCCceeeeeEEEEEecCCcccccc---ccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEc
Confidence 998 6999999999999999765555667777665432211 112246689999999999876554 89999999887
Q ss_pred CCCC------------eEEEe--ecCCCceEEEEEEecCceEEEEEEEEEEeccccCchhhhhhhccCCCCCeEEeccce
Q psy16863 692 KPGD------------VYQLT--GTSSLGSYCCVAKNVMGKAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKS 757 (1075)
Q Consensus 692 ~~~~------------~~~~~--~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 757 (1075)
..+. .+.+. ..+|+|.|+|.|.|..|....++.|.|. .+|.|...+.+
T Consensus 662 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~------------------~~P~~~~~~~~ 723 (816)
T 3dmk_A 662 SEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVY------------------VPPRWILEPTD 723 (816)
T ss_dssp CGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEE------------------EEEEEEECCCC
T ss_pred CCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEE------------------eCCceeeeccc
Confidence 5332 22332 3478999999999999999999999987 47888888888
Q ss_pred eeeecCCeEEEEEEEecCCCCeEEEEECCEEee-------cCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCce
Q psy16863 758 CQATVNEEFKFTVQVSISPEPKVSWFRDDQQVV-------ESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQ 830 (1075)
Q Consensus 758 ~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~-------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~ 830 (1075)
..+..|+.+.|.|.+.|.|.|.|+|+|++..+. .+.++.+ ..+ .|.|.+++.+|+|.|+|.|.|.+|.
T Consensus 724 ~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~---~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~ 798 (816)
T 3dmk_A 724 KAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRV---EEG--TLHVDNIQKTNEGYYLCEAINGIGS 798 (816)
T ss_dssp EEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEE---ETT--EEEECSCCGGGCEEEEEEEECSSSS
T ss_pred ceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEEe---cCC--EEEECcCChhhCeEEEEEEEeCCCC
Confidence 889999999999999999999999999875442 2233332 223 6999999999999999999999999
Q ss_pred EEEEEEEEEEe
Q psy16863 831 SITSCFLKLNV 841 (1075)
Q Consensus 831 ~~~s~~l~V~~ 841 (1075)
+.+++.+..+-
T Consensus 799 ~~~~v~~~~~~ 809 (816)
T 3dmk_A 799 GLSAVIMISVQ 809 (816)
T ss_dssp CEEEEEEEEEE
T ss_pred CcEEEEEEEee
Confidence 98887776653
No 4
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=5.6e-68 Score=635.17 Aligned_cols=540 Identities=23% Similarity=0.422 Sum_probs=455.7
Q ss_pred CCCccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCccccCCCeEEEeeCCeEEEEEcccCCCCC
Q psy16863 241 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFGNRFRAINRDGRTELNIRRVRRDDG 320 (1075)
Q Consensus 241 ~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~d~ 320 (1075)
.||.|+..+.++.+.+|+.++|.|.+.+ .+.+.+.|++++..+....++++...++..+|.|.+++.+|+
T Consensus 4 ~pP~f~~~~~~~~v~~G~~v~L~C~~~g----------~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~ 73 (570)
T 3b43_A 4 EPPYFIEPLEHVEAAIGEPITLQCKVDG----------TPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDV 73 (570)
T ss_dssp CCCEEEECCCCEEECTTSCEEEEEEEES----------SSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGC
T ss_pred CCCcceEECCceEEcCCCEEEEEEEEcc----------CCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhC
Confidence 5788999999999999999999887764 456788999888776667788888777888999999999999
Q ss_pred EEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEE
Q psy16863 321 GRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQH 400 (1075)
Q Consensus 321 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~ 400 (1075)
|.|+|.|.|..|.....+.+.|.. ...+|.|...+.+..+.+|+++.|.|.+.|.|++.|+|||||..+..+.++....
T Consensus 74 G~Y~C~a~N~~g~~~~~~~l~v~~-~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~ 152 (570)
T 3b43_A 74 GEYTCKAENSVGAVASSAVLVIKE-RKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSF 152 (570)
T ss_dssp EEEEEEEEETTEEEEEEEEEEECC-CCCCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEE
T ss_pred EEEEEEEEeCCceEEEEEEEEECC-CCCCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEE
Confidence 999999999999888777777763 3357888888888999999999999999999999999999999998887776666
Q ss_pred cCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecce-EEecCCeEEEEEEEECCCCCeEE
Q psy16863 401 DGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEA-ILTEQGTVSLECKVMGIPTPQLI 479 (1075)
Q Consensus 401 ~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~-~~~~g~~v~l~C~~~g~p~~~v~ 479 (1075)
......|.|.++..+|+|.|+|.|.|..|....++.|.|.... .+|.+...+.. .+.+|+.+.|.|.+.|.|++.|+
T Consensus 153 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~--~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~ 230 (570)
T 3b43_A 153 IHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHE--VPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKIT 230 (570)
T ss_dssp ETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC--CCCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEE
T ss_pred ECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCCC--CCCccccCCceeEecCCCeEEEEEEEEECCCCEEE
Confidence 6677789999999999999999999999998888888886542 34555544433 37789999999999999999999
Q ss_pred EEeCCEeccCCC---------EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCC
Q psy16863 480 WYKDNKKIKAGD---------IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPA 550 (1075)
Q Consensus 480 W~~~g~~l~~~~---------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~ 550 (1075)
|+|+|.++..+. ...|.|..+..+|+|.|+|.|.|..|....++.|.|.. +
T Consensus 231 W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~--------------------~ 290 (570)
T 3b43_A 231 WAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQE--------------------P 290 (570)
T ss_dssp EEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBC--------------------C
T ss_pred EEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeec--------------------C
Confidence 999999987653 34688999999999999999999999998888887762 3
Q ss_pred Ceeeeec-cceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEEC
Q psy16863 551 PIFIKEV-ENVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATS 629 (1075)
Q Consensus 551 ~~~~~~~-~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 629 (1075)
|.+...+ ....+.+|+.+.|.|.+.|.|.| .+.|+|++..+..+.++.+...+ ....|.|.+++.+|+|.|+|.|.|
T Consensus 291 p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p-~v~W~k~~~~l~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~N 368 (570)
T 3b43_A 291 PRFIKKLEPSRIVKQDEHTRYECKIGGSPEI-KVLWYKDETEIQESSKFRMSFVE-SVAVLEMYNLSVEDSGDYTCEAHN 368 (570)
T ss_dssp CEEEECCCSBCCEESSCEEEEEEEEESSSSC-EEEEEETTEECCCSSSEEEEEET-TEEEEEEESCCGGGCEEEEEEEEB
T ss_pred CcccccCCCccEEcCCCcEEEEEEEeeCCCC-EEEEeECCEECCCCCcEEEEEEC-CEEEEEECCCCcccCEEEEEEEEe
Confidence 4444433 33457899999999999999987 89999999999888887765544 345899999999999999999999
Q ss_pred CCCceeeeeEEEEEeCCCCcCCCceeeccce-eeecCCeEEEEEEEecCCCCeEEEEECCEEcCCCCeEEEe--------
Q psy16863 630 SSGVKQFSAAYVHVLMPKNYRKPRFVESLKA-VMTDDGLVSFECKVVGFPTPTLQWFKDNEELKPGDVYQLT-------- 700 (1075)
Q Consensus 630 ~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~-~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~l~~~~~~~~~-------- 700 (1075)
..|.... ...|.|..|+ .|...... .+.+|+.+.|.|.+.|.|.|.++|+|+|..+..+.++.+.
T Consensus 369 ~~g~~~~-~~~l~V~~~P-----~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L 442 (570)
T 3b43_A 369 AAGSASS-STSLKVKEPP-----VFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSI 442 (570)
T ss_dssp TTBCCEE-EEEECEECCC-----EECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEE
T ss_pred CCCEEEE-EEEEEecCCC-----eeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEE
Confidence 9998764 4577777664 33332222 3567889999999999999999999999999887766543
Q ss_pred -----ecCCCceEEEEEEecCceEEEEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecC
Q psy16863 701 -----GTSSLGSYCCVAKNVMGKAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSIS 775 (1075)
Q Consensus 701 -----~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~ 775 (1075)
..+|+|.|+|.|.|..|.....+.|.|. .||.|...+.+..+..|+.+.|.|.+.|.
T Consensus 443 ~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~------------------~~P~~~~~~~~~~~~~g~~~~l~c~~~g~ 504 (570)
T 3b43_A 443 HILNVDSADIGEYQCKASNDVGSDTCVGSITLK------------------APPRFVKKLSDISTVVGEEVQLQATIEGA 504 (570)
T ss_dssp EECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC------------------CCCEEEECCCCBCCBTTCCEEEEEEEESC
T ss_pred EECCCChhhCEEEEEEEEECCCeEEEEEEEEec------------------cCCcccccCCCceecCCCeEEEEEEEecC
Confidence 2368999999999999999999999887 58999999999999999999999999999
Q ss_pred CCCeEEEEECCEEe-ecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEE
Q psy16863 776 PEPKVSWFRDDQQV-VESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLN 840 (1075)
Q Consensus 776 p~p~v~W~k~g~~i-~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~ 840 (1075)
|.|.|+|+|||..+ ..+.++.+... .+...|.|.+++.+|+|.|+|.|.|.+|.+.+++.|.|.
T Consensus 505 p~~~v~W~k~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 505 EPISVAWFKDKGEIVRESDNIWISYS-ENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp SSCCCEEEETTEECCCCTTTEEECCC-SSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCB
T ss_pred CCCEEEEEeCCeEeccCCCeEEEEEC-CCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEe
Confidence 99999999998665 45566665433 356799999999999999999999999999999998774
No 5
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=5.1e-66 Score=630.27 Aligned_cols=608 Identities=16% Similarity=0.243 Sum_probs=461.5
Q ss_pred cccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCcc---------------cc----CCCeEEEeeCCe
Q psy16863 247 RRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHP---------------IF----GNRFRAINRDGR 307 (1075)
Q Consensus 247 ~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~---------------~~----~~~~~~~~~~~~ 307 (1075)
.++.+..+.+|+.++|.|...+. +...+.|++++... .. ..+..+.. .
T Consensus 4 ~~p~~~~v~~G~~v~L~C~~~~~----------~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~gr~~~~~---~ 70 (642)
T 1e07_A 4 IESTPFNVAEGKEVLLLVHNLPQ----------HLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYP---N 70 (642)
T ss_pred EeccCCcccccccEEEEEccCCC----------CceEEEEECCcccCCcceEEEEEccccccccCccccCceeecc---C
Confidence 34556778999999999975432 23345565522111 00 11222211 2
Q ss_pred EEEEEcccCCCCCEEEEEEEEeC-CeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEEC
Q psy16863 308 TELNIRRVRRDDGGRYSVTASNE-SGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRN 386 (1075)
Q Consensus 308 ~~L~I~~~~~~d~G~Y~C~a~n~-~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~ 386 (1075)
.+|.|.+++.+|+|.|+|.+.|. .+.....+.|.|... +.+|.+.. .....+.+|+.+.|.|.+.+ |.+.|+|+|+
T Consensus 71 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~-~~~p~i~~-~~~~~v~~g~~v~l~C~~~~-p~~~v~W~~~ 147 (642)
T 1e07_A 71 ASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPE-LPKPSISS-NNSKPVEDKDAVAFTCEPET-QDATYLWWVN 147 (642)
T ss_pred CcEEECCCCcccCcEEEEEEEcCCCeEEEEEEEEEeccc-CCCCcEEc-cCceeEecCCcEEEEEECCC-CCeeEEEEEC
Confidence 37999999999999999999985 344566777888752 23455443 34567889999999999988 8899999999
Q ss_pred CEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCce-eeEEEEEeecCCCCCCCeeeeecceEEecCCeEE
Q psy16863 387 DRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRS-HCSCELSVLVPKAYKAPFFTKELEAILTEQGTVS 465 (1075)
Q Consensus 387 g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~-~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~ 465 (1075)
|..+..+.++.+..++. .|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+|. .+.+ .+....+.+|+.+.
T Consensus 148 g~~l~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~--~~~~-~~~~~~~~~G~~~~ 222 (642)
T 1e07_A 148 NQSLPVSPRLQLSNGNR--TLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPD--APTI-SPLNTSYRSGENLN 222 (642)
T ss_pred CeECCCCCceEEcCCCC--EEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCC--CcEE-ecCCcccccCCEEE
Confidence 99998887776655443 68999999999999999999998864 3456777775542 2222 22233478999999
Q ss_pred EEEEEECCCCCeEEEEeCCEeccCCCEEEEEeCCCCCCCcEEEEEEEEecceeeEEEE--EEEEeccccccCCCCCCcCC
Q psy16863 466 LECKVMGIPTPQLIWYKDNKKIKAGDIFALTANPKDPSSLGTYTCEAVNCMGAAFSTS--RVIARGQQSFLDNDDVPFNS 543 (1075)
Q Consensus 466 l~C~~~g~p~~~v~W~~~g~~l~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~--~v~v~~~~~~~~~~~~~~~~ 543 (1075)
|.|.+.|.|.+.|+|+|+|..+..+ ..|.|..+..+|+|.|+|.|.|..|....+. .|.|...
T Consensus 223 l~C~~~g~p~~~i~W~~~g~~i~~~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~------------- 287 (642)
T 1e07_A 223 LSCHAASNPPAQYSWFVNGTFQQST--QELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAE------------- 287 (642)
T ss_pred EEEEcCCCCCcEEEEEECCeEcccC--CceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEcc-------------
Confidence 9999999999999999999998654 4588889999999999999999998765544 4444321
Q ss_pred CCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceE
Q psy16863 544 LMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEW 623 (1075)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 623 (1075)
.++|.+ .......+..|+.+.|.|.+.+.| + .+.|++++..+..+.++.+..++ ..|.|.++..+|+|.|
T Consensus 288 ----~~~p~i-~~~~~~~~~~g~~v~l~C~~~~~p-~-~v~W~~~g~~l~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y 357 (642)
T 1e07_A 288 ----PPKPFI-TSNNSNPVEDEDAVALTCEPEIQN-T-TYLWWVNNQSLPVSPRLQLSNDN---RTLTLLSVTRNDVGPY 357 (642)
T ss_pred ----CCCCEE-EcCCceeEecCCcEEEEEECCCCC-c-cEEEEECCccCCCcCCEEEeCCC---CEEEEeccCcccCeeE
Confidence 122332 223344566688899999999876 4 79999999988877777765443 3899999999999999
Q ss_pred EEEEECCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEEecCCCCeEEEEECCEEcCCCCeEEEee--
Q psy16863 624 KCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKVVGFPTPTLQWFKDNEELKPGDVYQLTG-- 701 (1075)
Q Consensus 624 ~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~l~~~~~~~~~~-- 701 (1075)
+|.|.|..|........+.|..++.. +.+ ......+..|+.+.|.|.+.|.|.|.++|+|+|..+..+..+.+..
T Consensus 358 ~C~a~n~~g~~~s~~~~l~V~~~p~~--~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~~~L~i~~~~ 434 (642)
T 1e07_A 358 ECGIQNELSVDHSDPVILNVLYGPDD--PTI-SPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHTQELFISNIT 434 (642)
T ss_pred EEEEeCCCCCcceeeEEEEEEcCCCC--Cee-cCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCCceEEEccCC
Confidence 99999999876545566777655421 221 2223356789999999999999999999999999998888887764
Q ss_pred cCCCceEEEEEEecCceEEEEEE--EEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCe
Q psy16863 702 TSSLGSYCCVAKNVMGKAESSTQ--LTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPK 779 (1075)
Q Consensus 702 ~~d~G~Y~C~a~N~~g~~~~~~~--l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~ 779 (1075)
.+|.|.|+|.|.|..|....+.. +.|... ..+|.+. ......+..|+++.|.|.+. .|.+.
T Consensus 435 ~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~---------------~~~p~i~-~~~~~~v~~g~~v~l~C~~~-~~~~~ 497 (642)
T 1e07_A 435 EKNSGLYTCQANNSASGHSRTTVKTITVSAE---------------LPKPSIS-SNNSKPVEDKDAVAFTCEPE-AQNTT 497 (642)
T ss_pred hhhCeEEEEEEEcCCCCCcccceEEEEEecc---------------CCCceEe-cCCceeecCCCeEEEEEECC-CCCcE
Confidence 47999999999999998776644 444321 1244443 34556788999999999999 48899
Q ss_pred EEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEE-EEEEEEEecCCCCCCeeeeecceee
Q psy16863 780 VSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSIT-SCFLKLNVPKHYKKPKFLEELKAVL 858 (1075)
Q Consensus 780 v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~-s~~l~V~~~~~~~~p~~~~~~~~~~ 858 (1075)
++|+|+|.++..+.++.+... ...|.|.+++.+|+|.|+|.|.|..|...+ ++.|.|..+|.. +. .......+
T Consensus 498 i~W~~~g~~l~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~--~~-~~~~~~~v 571 (642)
T 1e07_A 498 YLWWVNGQSLPVSPRLQLSNG---NRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDT--PI-ISPPDSSY 571 (642)
T ss_pred EEEEECCEeCCCCCcEEEcCC---CcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCc--ce-ecCCceeE
Confidence 999999999988888776532 248999999999999999999999998654 688888865421 11 11122347
Q ss_pred cCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCeeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEe
Q psy16863 859 SEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDIHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGF 928 (1075)
Q Consensus 859 ~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 928 (1075)
.+|+.++|.|.+.|.|.|.|+|+|||.+|..+. .|.+......|+|.|+|.|.|.+|.+++++.|.|.
T Consensus 572 ~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l~V~ 639 (642)
T 1e07_A 572 LSGANLNLSCHSASNPSPQYSWRINGIPQQHTQ--VLFIAKITPNNNGTYACFVSNLATGRNNSIVKSIT 639 (642)
T ss_pred EcCCcEEEEEEeccCCCCeEEEEECCEECccCc--eEEECcccccCCeEEEEEEEecccCcceeEEEEEE
Confidence 789999999999999999999999999998654 45666777889999999999999999999988875
No 6
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=8.8e-65 Score=619.35 Aligned_cols=594 Identities=15% Similarity=0.208 Sum_probs=449.3
Q ss_pred ecceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCCceec--------------------cCcEEEEecCCe
Q psy16863 141 RLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIF--------------------GNRFRAINRDGR 200 (1075)
Q Consensus 141 ~~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~~~~~--------------------~~~~~~~~~~~~ 200 (1075)
.+.++.+.+|++++|.|...+. +...+.|++++. ... .+|+.+. . .
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~----------~~~~v~W~k~~~-~~~~~~i~~~~~~~~~~~~~~~~~gr~~~~-~--~ 70 (642)
T 1e07_A 5 ESTPFNVAEGKEVLLLVHNLPQ----------HLFGYSWYKGER-VDGNRQIIGYVIGTQQATPGPAYSGREIIY-P--N 70 (642)
T ss_pred eccCCcccccccEEEEEccCCC----------CceEEEEECCcc-cCCcceEEEEEccccccccCccccCceeec-c--C
Confidence 3456678899999999985442 335677877432 111 1122111 1 2
Q ss_pred EEEEEceeccCCCeEEEEEEEcC-ceeEEEEEEEeeeccCCCCCccccccccceeeccceeEEEEEecCCCceEEEEecC
Q psy16863 201 TELNIRRVRRDDGGRYSVTASNE-SGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLN 279 (1075)
Q Consensus 201 ~~L~I~~~~~~D~G~Y~C~a~n~-~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~ 279 (1075)
..|.|.+++.+|+|.|+|.+.|. .+.....+.|.|.... .+|.+ .......+.+|+.+.|.|.+.+
T Consensus 71 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~-~~p~i-~~~~~~~v~~g~~v~l~C~~~~----------- 137 (642)
T 1e07_A 71 ASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPEL-PKPSI-SSNNSKPVEDKDAVAFTCEPET----------- 137 (642)
T ss_pred CcEEECCCCcccCcEEEEEEEcCCCeEEEEEEEEEecccC-CCCcE-EccCceeEecCCcEEEEEECCC-----------
Confidence 37999999999999999999986 3555667778876422 23333 3344566888999998887653
Q ss_pred CCeeeEEecCCCccccCCCeEEEeeCCeEEEEEcccCCCCCEEEEEEEEeCCee-EEEEEEEEEecCCCCCCeeeeecCc
Q psy16863 280 NTIPFSFRAQGDHPIFGNRFRAINRDGRTELNIRRVRRDDGGRYSVTASNESGY-STAKFELSVESQVPDAPAFIRRLHD 358 (1075)
Q Consensus 280 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~p~~~~~~~~ 358 (1075)
+.+.+.|++++..+..+.++.+... ...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|... |+.+...+.+
T Consensus 138 p~~~v~W~~~g~~l~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~---p~~~~~~~~~ 212 (642)
T 1e07_A 138 QDATYLWWVNNQSLPVSPRLQLSNG--NRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYG---PDAPTISPLN 212 (642)
T ss_pred CCeeEEEEECCeECCCCCceEEcCC--CCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeC---CCCcEEecCC
Confidence 4567888887765555666665433 348999999999999999999998875 355678888742 2222334567
Q ss_pred eeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEE
Q psy16863 359 IAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELS 438 (1075)
Q Consensus 359 ~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~ 438 (1075)
..+.+|+.++|.|.+.|.|.+.|+|+|||..+..+ ..|.|.+++.+|+|.|+|.|.|..|....+..+.
T Consensus 213 ~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~~-----------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~ 281 (642)
T 1e07_A 213 TSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQST-----------QELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTT 281 (642)
T ss_pred cccccCCEEEEEEEcCCCCCcEEEEEECCeEcccC-----------CceEEecccccCCeEEEEEEEeCCCceEEeeeEE
Confidence 78899999999999999999999999999988432 2488999999999999999999998776555555
Q ss_pred eecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCCE-------EEEEeCCCCCCCcEEEEEE
Q psy16863 439 VLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGDI-------FALTANPKDPSSLGTYTCE 511 (1075)
Q Consensus 439 V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~~-------~~l~i~~~~~~d~G~Y~C~ 511 (1075)
|.+.....+|.+.......+..|+.+.|.|.+.+.| +.++|+|+|+.+..+.+ ..|.|..+..+|+|.|+|.
T Consensus 282 v~v~~~~~~p~i~~~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 360 (642)
T 1e07_A 282 ITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECG 360 (642)
T ss_pred EEEEccCCCCEEEcCCceeEecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEE
Confidence 554333344555544444466688899999999876 69999999998865433 3688999999999999999
Q ss_pred EEecceeeE-EEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEeCCe
Q psy16863 512 AVNCMGAAF-STSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKEG 590 (1075)
Q Consensus 512 a~n~~g~~~-~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~ 590 (1075)
|.|..|... ..+.|.|.. +|+.+...+....+.+|+.++|.|.+.+.|.| .+.|++++.
T Consensus 361 a~n~~g~~~s~~~~l~V~~-------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~i~W~~~g~ 420 (642)
T 1e07_A 361 IQNELSVDHSDPVILNVLY-------------------GPDDPTISPSYTYYRPGVNLSLSCHAASNPPA-QYSWLIDGN 420 (642)
T ss_pred EeCCCCCcceeeEEEEEEc-------------------CCCCCeecCCceEecCCCcEEEEEEcCccCCC-eEEEEECCE
Confidence 999998753 346677652 12222334556778999999999999999977 899999988
Q ss_pred EEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEE
Q psy16863 591 VVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSF 670 (1075)
Q Consensus 591 ~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l 670 (1075)
.+..+ ..|.|.++..+|+|.|+|.|.|..|....+ ..+.|.+.....+|.+.......+.+|+.+.|
T Consensus 421 ~~~~~------------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s-~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l 487 (642)
T 1e07_A 421 IQQHT------------QELFISNITEKNSGLYTCQANNSASGHSRT-TVKTITVSAELPKPSISSNNSKPVEDKDAVAF 487 (642)
T ss_pred EcCCC------------ceEEEccCChhhCeEEEEEEEcCCCCCccc-ceEEEEEeccCCCceEecCCceeecCCCeEEE
Confidence 76421 269999999999999999999999876533 23344333323345554433444668999999
Q ss_pred EEEEecCCCCeEEEEECCEEcCCCCeEEEe-----------ecCCCceEEEEEEecCceEEE-EEEEEEEeccccCchhh
Q psy16863 671 ECKVVGFPTPTLQWFKDNEELKPGDVYQLT-----------GTSSLGSYCCVAKNVMGKAES-STQLTIEDIRNHLSEED 738 (1075)
Q Consensus 671 ~C~v~g~p~p~v~W~k~g~~l~~~~~~~~~-----------~~~d~G~Y~C~a~N~~g~~~~-~~~l~V~~~~~~~~~~~ 738 (1075)
.|.+.+ |.+.++|+|+|..+..+.++.+. ..+|+|.|+|.|.|..|...+ .+.|.|..
T Consensus 488 ~C~~~~-~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~--------- 557 (642)
T 1e07_A 488 TCEPEA-QNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLY--------- 557 (642)
T ss_pred EEECCC-CCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEe---------
Confidence 999984 88899999999998876654432 236899999999999998655 68888874
Q ss_pred hhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCe
Q psy16863 739 KLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQA 818 (1075)
Q Consensus 739 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G 818 (1075)
.|+.+...+.+..+..|+.+.|.|.+.|.|.|.|+|+|||.+|..+ ..|.|.+++.+|+|
T Consensus 558 --------~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~------------~~L~i~~~~~~d~G 617 (642)
T 1e07_A 558 --------GPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHT------------QVLFIAKITPNNNG 617 (642)
T ss_pred --------CCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECccC------------ceEEECcccccCCe
Confidence 3555666667788999999999999999999999999999988542 26999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEEe
Q psy16863 819 EWKCIATNDFGQSITSCFLKLNV 841 (1075)
Q Consensus 819 ~Y~C~A~N~~G~~~~s~~l~V~~ 841 (1075)
.|+|.|.|.+|.+..++.|.|.+
T Consensus 618 ~Y~C~a~N~~G~~~~s~~l~V~v 640 (642)
T 1e07_A 618 TYACFVSNLATGRNNSIVKSITV 640 (642)
T ss_pred EEEEEEEecccCcceeEEEEEEE
Confidence 99999999999999999998875
No 7
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=3e-61 Score=603.00 Aligned_cols=623 Identities=15% Similarity=0.211 Sum_probs=117.8
Q ss_pred CCCccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCccccCCCeEEEe--e-CCeEEEEEcccCC
Q psy16863 241 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFGNRFRAIN--R-DGRTELNIRRVRR 317 (1075)
Q Consensus 241 ~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~--~-~~~~~L~I~~~~~ 317 (1075)
.+|.+........+.+|++++|.|.... .+.|.+.+.......++.+.. + ....+|.|.+++.
T Consensus 30 ~~p~l~~~~~~~~v~~G~~vtL~C~~~~--------------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~I~~~~~ 95 (772)
T 3v2a_R 30 DLPRLSIQKDILTIKANTTLQITCRGQR--------------DLDWLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIG 95 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEECCCCCeEEEcCCCCEEEEEeccC--------------CeeeeCCCCCCccCCceeEEEcCCCcEEEEEEECCCcH
Confidence 3455555566778999999999997542 234444333222222333322 1 2245899999999
Q ss_pred CCCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCee---eeecCceeeccC--CeEEEEEEEecCCCcEEEEEEC--CEec
Q psy16863 318 DDGGRYSVTASNESGYSTAKFELSVESQVPDAPAF---IRRLHDIAVKVG--TRARLLVEIRSPTEIKIHWYRN--DRKL 390 (1075)
Q Consensus 318 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~---~~~~~~~~v~~G--~~v~l~C~~~g~p~~~v~W~k~--g~~l 390 (1075)
+|+|.|+|.+.+ +..+..+.|.|.. +.+|.+ ...+....+.+| ++++|.|.+.+ |.+.|+|+|+ |..+
T Consensus 96 ~d~G~Y~C~~~~--~~~~~~~~v~v~~--~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w~~~~~~~~~ 170 (772)
T 3v2a_R 96 NDTGAYKCFYRE--TDLASVIYVYVQD--YRSPFIASVSDQHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRF 170 (772)
T ss_dssp ----------------------------------------CEEEEEEESSCCCEEEECCCCSC-SSCCEEEEEETTTEEE
T ss_pred hhCEeEEEEEcC--CCEEEEEEEEECC--CCCCceEcCcccceeEEEecCCCCeEEEEccCCC-CCcEEEEEecCCCccc
Confidence 999999999973 2234445555542 223332 123456778899 99999999966 6789999998 6665
Q ss_pred CCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeE-EEEEeecCCCCCCCeeeeecc-eEEecCCeEEEEE
Q psy16863 391 EENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCS-CELSVLVPKAYKAPFFTKELE-AILTEQGTVSLEC 468 (1075)
Q Consensus 391 ~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s-~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~v~l~C 468 (1075)
............. .|.|.+++.+|+|.|+|.+.+..+..... ..+.+...+ .+.....+.. ..+.+|+.+.|.|
T Consensus 171 ~~~~~~~~~~~~~--~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~--~~~v~~~~~~~~~v~~G~~v~L~C 246 (772)
T 3v2a_R 171 VPDGNRISWDSKK--GFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYR--IYDVVLSPSHGIELSVGEKLVLNC 246 (772)
T ss_dssp CCCSSSCEEETTT--EEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECCC--EEEEEEECCSCEEEETTCCEEEEE
T ss_pred cCCCceeecCCCC--CeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEecCc--cceeeeCCCCceEEecCCcEEEEE
Confidence 4433211222222 48899999999999999999864432221 233332221 1112222222 3588999999999
Q ss_pred EEEC--CCCCeEEEEeCCEeccCC-----------------CEEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEec
Q psy16863 469 KVMG--IPTPQLIWYKDNKKIKAG-----------------DIFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARG 529 (1075)
Q Consensus 469 ~~~g--~p~~~v~W~~~g~~l~~~-----------------~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~ 529 (1075)
.+.+ .|.+.+.|++++..+... ....|.|..+..+|+|.|+|.|.|..|.......|.|..
T Consensus 247 ~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~ 326 (772)
T 3v2a_R 247 TARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHE 326 (772)
T ss_dssp EEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeC
Confidence 9997 455689999999875431 233689999999999999999999999888888888873
Q ss_pred cccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEecCCcEEEEEcCCceEE
Q psy16863 530 QQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEASDKYHIMADGLGGYS 609 (1075)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~ 609 (1075)
++.. ...........+.+|+.++|.|.+.+.|.| .+.|++++..+.....+ . +...
T Consensus 327 ~p~~-----------------~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-~v~W~~~g~~l~~~~~~--~----~~~~ 382 (772)
T 3v2a_R 327 KPFV-----------------AFGSGMESLVEATVGERVRIPAKYLGYPPP-EIKWYKNGIPLESNHTI--K----AGHV 382 (772)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred CCee-----------------EeccCCCCcEEEcCCCcEEEEEEEeeeCCC-eEEEEECCEeCCCCceE--c----ccee
Confidence 2110 001112245668899999999999998877 89999999887653222 1 2348
Q ss_pred EEEeeeeecCCceEEEEEECCCCceee-eeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEEecCCCCe-EEEEEC
Q psy16863 610 IEINYLEAVDDGEWKCVATSSSGVKQF-SAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKVVGFPTPT-LQWFKD 687 (1075)
Q Consensus 610 L~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v~g~p~p~-v~W~k~ 687 (1075)
|.|.++..+|+|.|+|.|.|..|.... ....+.|..|+.+....+.. ....+..|+.+.|.|.+.|.|.|. ++|+++
T Consensus 383 L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~ 461 (772)
T 3v2a_R 383 LTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLIS-PVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQ 461 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCC-CccccCCCCcEEEEeEeccCCCCcEEEEEEc
Confidence 999999999999999999999886542 23345555554332211111 112366789999999999999996 999996
Q ss_pred CEE--------------------------------cC---------CC-----CeEEEeecCCCceEEEEEEecCceEEE
Q psy16863 688 NEE--------------------------------LK---------PG-----DVYQLTGTSSLGSYCCVAKNVMGKAES 721 (1075)
Q Consensus 688 g~~--------------------------------l~---------~~-----~~~~~~~~~d~G~Y~C~a~N~~g~~~~ 721 (1075)
+.. +. .+ ..+.+...+|+|.|+|.|.|..|....
T Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~~d~G~Y~C~a~N~~g~~~~ 541 (772)
T 3v2a_R 462 LEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAANVSALYKCEAVNKVGRGER 541 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeecccCeEEEEEEEccccccce
Confidence 322 11 00 122333447899999999999999988
Q ss_pred EEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEE---
Q psy16863 722 STQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKIL--- 798 (1075)
Q Consensus 722 ~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~--- 798 (1075)
.+.|.|.. +|.+...+. ..+.+|+++.|.|.+.|.|.|.++|+|+|..+.........
T Consensus 542 ~~~l~V~~------------------~p~i~~~p~-~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~ 602 (772)
T 3v2a_R 542 VISFHVTR------------------GPEITLQPD-MQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPV 602 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEEEC------------------CceeeccCC-cccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccc
Confidence 88888873 455544333 34779999999999999999999999999876543222111
Q ss_pred ----------------EeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEE--EEEEEEEecCCCCCCeeeeecce-eec
Q psy16863 799 ----------------KETLGVCHLKIHALEVADQAEWKCIATNDFGQSIT--SCFLKLNVPKHYKKPKFLEELKA-VLS 859 (1075)
Q Consensus 799 ----------------~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~--s~~l~V~~~~~~~~p~~~~~~~~-~~~ 859 (1075)
....+...|.|.+++.+|+|.|+|.|.|..|.... ...|.|.+. .+|.|...+.. .+.
T Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~---~~P~~~~~~~~~~v~ 679 (772)
T 3v2a_R 603 CKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLER---VAPTITGNLENQTTS 679 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeeccccc---CCCEeecCCCceEEe
Confidence 11223456999999999999999999997665443 344555321 24555544443 377
Q ss_pred CCCeEEEEEEEEccCCCeeEEEECCEEcCCCC-------eeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEecCCh
Q psy16863 860 EGGAVNLECKVIGVPQPTLKWFKDGRELKAGD-------IHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFEDKS 932 (1075)
Q Consensus 860 ~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~-------~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 932 (1075)
+|+.++|.|.+.|.|.|.|+|+|||.+|..+. ...|.+......|+|.|+|.|.|.+|.+++++.|.|.++|.
T Consensus 680 ~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~ 759 (772)
T 3v2a_R 680 IGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQE 759 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEcCCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCC
Confidence 89999999999999999999999999987654 33456666777899999999999999999999999987665
Q ss_pred h
Q psy16863 933 Q 933 (1075)
Q Consensus 933 ~ 933 (1075)
.
T Consensus 760 ~ 760 (772)
T 3v2a_R 760 K 760 (772)
T ss_dssp -
T ss_pred c
Confidence 4
No 8
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=2.9e-60 Score=594.11 Aligned_cols=629 Identities=17% Similarity=0.235 Sum_probs=122.6
Q ss_pred cccceeecceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCCceeccCcEEEEe--c-CCeEEEEEceeccC
Q psy16863 135 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFGNRFRAIN--R-DGRTELNIRRVRRD 211 (1075)
Q Consensus 135 ~p~~~~~~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~-~~~~~L~I~~~~~~ 211 (1075)
+|.+........+.+|++++|.|...+ .+.|.+.+.......++.+.. . .....|.|.+++.+
T Consensus 31 ~p~l~~~~~~~~v~~G~~vtL~C~~~~--------------~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~ 96 (772)
T 3v2a_R 31 LPRLSIQKDILTIKANTTLQITCRGQR--------------DLDWLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGN 96 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEECCCCCeEEEcCCCCEEEEEeccC--------------CeeeeCCCCCCccCCceeEEEcCCCcEEEEEEECCCcHh
Confidence 455555556778999999999998643 346766554333333433322 1 22458999999999
Q ss_pred CCeEEEEEEEcCceeEEEEEEEeeeccCCCCCcc---ccccccceeecc--ceeEEEEEecCCCceEEEEecCCCeeeEE
Q psy16863 212 DGGRYSVTASNESGYSTAKFELSVESQVPDAPAF---IRRLHDIAVKVG--TRARLLVEIRSPTEIKCQFDLNNTIPFSF 286 (1075)
Q Consensus 212 D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~---~~~~~~~~v~~g--~~~~l~c~~~~~~~~~c~~~~~~~~~~~w 286 (1075)
|+|.|+|.+.+ +..+.++.|.|. .+.+|.+ ...+..+.+.+| +.++|.|.+.. +...+.|
T Consensus 97 d~G~Y~C~~~~--~~~~~~~~v~v~--~~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~~~-----------p~~~v~w 161 (772)
T 3v2a_R 97 DTGAYKCFYRE--TDLASVIYVYVQ--DYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSI-----------SNLNVSL 161 (772)
T ss_dssp ---------------------------------------CEEEEEEESSCCCEEEECCCCSC-----------SSCCEEE
T ss_pred hCEeEEEEEcC--CCEEEEEEEEEC--CCCCCceEcCcccceeEEEecCCCCeEEEEccCCC-----------CCcEEEE
Confidence 99999999973 233344555554 2222322 233566778889 89999988764 3457788
Q ss_pred ecC--CCccccCCCeEEEeeCCeEEEEEcccCCCCCEEEEEEEEeCCeeEEE-EEEEEEecCCCCCCeee-eecCceeec
Q psy16863 287 RAQ--GDHPIFGNRFRAINRDGRTELNIRRVRRDDGGRYSVTASNESGYSTA-KFELSVESQVPDAPAFI-RRLHDIAVK 362 (1075)
Q Consensus 287 ~~~--~~~~~~~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~p~~~-~~~~~~~v~ 362 (1075)
+++ ++............ ....|.|.+++.+|+|.|+|.+.+..+.... ...+.+.. ..+|.+. ..+....+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~--~~~~~v~~~~~~~~~v~ 237 (772)
T 3v2a_R 162 CARYPEKRFVPDGNRISWD--SKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVG--YRIYDVVLSPSHGIELS 237 (772)
T ss_dssp EEETTTEEECCCSSSCEEE--TTTEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEEC--CCEEEEEEECCSCEEEE
T ss_pred EecCCCccccCCCceeecC--CCCCeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEec--CccceeeeCCCCceEEe
Confidence 876 55444422221111 2236999999999999999999986554322 23343432 2233333 333457899
Q ss_pred cCCeEEEEEEEec--CCCcEEEEEECCEecCCCCcEEEE--------EcCCEEEEEEcccCCCCceeEEEEEEeCCCcee
Q psy16863 363 VGTRARLLVEIRS--PTEIKIHWYRNDRKLEENKIYRTQ--------HDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSH 432 (1075)
Q Consensus 363 ~G~~v~l~C~~~g--~p~~~v~W~k~g~~l~~~~~~~~~--------~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~ 432 (1075)
+|++++|.|.+.+ .+.+.|.|+++|..+......... .......|.|.+++.+|+|.|+|.|.|..|...
T Consensus 238 ~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 317 (772)
T 3v2a_R 238 VGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKK 317 (772)
T ss_dssp TTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEE
T ss_pred cCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCccee
Confidence 9999999999987 456799999999887654332211 112345799999999999999999999999888
Q ss_pred eEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCC----EEEEEeCCCCCCCcEEE
Q psy16863 433 CSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGD----IFALTANPKDPSSLGTY 508 (1075)
Q Consensus 433 ~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~----~~~l~i~~~~~~d~G~Y 508 (1075)
.+..|.|..+|...... .......+.+|+.+.|.|.+.|+|.+.+.|+|+|..+.... ...|.|..+..+|+|.|
T Consensus 318 ~~~~l~V~~~p~~~~~~-~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~L~i~~v~~~d~G~Y 396 (772)
T 3v2a_R 318 NSTFVRVHEKPFVAFGS-GMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGHVLTIMEVSERDTGNY 396 (772)
T ss_dssp EEEEEEEECCCC--------------------------------------------------------------------
T ss_pred EEEEEEEeCCCeeEecc-CCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceEccceeEEEecCChhcCceE
Confidence 88888888765432111 01122347889999999999999999999999999887542 25788899999999999
Q ss_pred EEEEEecceeeEEEE--EEEEeccccccCCCCCCcCCCCCCCCCCeeeee---ccceEeecCCeEEEEEEEecCCCCceE
Q psy16863 509 TCEAVNCMGAAFSTS--RVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKE---VENVKAKIGTSAILECQVLVPPWPRSI 583 (1075)
Q Consensus 509 ~C~a~n~~g~~~~~~--~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~G~~~~L~C~~~~~p~p~~v 583 (1075)
+|.|.|..|....+. .|.|.. +|.+... .....+.+|+.++|.|.+.+.|.|..+
T Consensus 397 ~C~a~n~~g~~~~s~~~~l~v~~--------------------~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v 456 (772)
T 3v2a_R 397 TVILTNPISKEKQSHVVSLVVYV--------------------PPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHI 456 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEECCcCeEEEEEEEEEEec--------------------CCcccccccCCCccccCCCCcEEEEeEeccCCCCcEE
Confidence 999999998765444 344331 2222111 111237889999999999999988449
Q ss_pred EEEeCCeE--------------------------------EecC-CcEEEEEc-CCceEEEEEeeeeecCCceEEEEEEC
Q psy16863 584 YWYNKEGV--------------------------------VEAS-DKYHIMAD-GLGGYSIEINYLEAVDDGEWKCVATS 629 (1075)
Q Consensus 584 ~W~~~~~~--------------------------------i~~~-~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n 629 (1075)
.|++++.. +... .+..+... ......|.|.++ +|+|.|+|.|.|
T Consensus 457 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N 534 (772)
T 3v2a_R 457 HWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVN 534 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEcCCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEc
Confidence 99997432 1100 01111111 111246777776 799999999999
Q ss_pred CCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEEecCCCCeEEEEECCEEcCCCCe-------------
Q psy16863 630 SSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKVVGFPTPTLQWFKDNEELKPGDV------------- 696 (1075)
Q Consensus 630 ~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~l~~~~~------------- 696 (1075)
..|.... ...+.|..+ |.+.......+.+|+.+.|.|.+.|.|.+.++|+|+|..+.....
T Consensus 535 ~~g~~~~-~~~l~V~~~-----p~i~~~p~~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~ 608 (772)
T 3v2a_R 535 KVGRGER-VISFHVTRG-----PEITLQPDMQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDT 608 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccce-eEEEEEECC-----ceeeccCCcccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccc
Confidence 9997653 345555543 333333333466889999999999999999999998876542211
Q ss_pred ------------------EEEe--ecCCCceEEEEEEecCceEEE--EEEEEEEeccccCchhhhhhhccCCCCCeEEec
Q psy16863 697 ------------------YQLT--GTSSLGSYCCVAKNVMGKAES--STQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEG 754 (1075)
Q Consensus 697 ------------------~~~~--~~~d~G~Y~C~a~N~~g~~~~--~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~ 754 (1075)
+.+. ..+|+|.|+|.|.|..|.... ...|.|.. ..+|.|...
T Consensus 609 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~----------------~~~P~~~~~ 672 (772)
T 3v2a_R 609 LWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLE----------------RVAPTITGN 672 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccc----------------cCCCEeecC
Confidence 2222 347999999999997655432 34555532 158888888
Q ss_pred cceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEE
Q psy16863 755 LKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITS 834 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s 834 (1075)
+.+..+.+|+.+.|.|.+.|.|.|.|+|+|||.+|..+.++.+.. +...|.|.+++.+|+|.|+|.|.|.+|.+.++
T Consensus 673 ~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 749 (772)
T 3v2a_R 673 LENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKD---GNRNLTIRRVRKEDEGLYTCQACSVLGCAKVE 749 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEcC---CCcEEEECcCCHHHCEEEEEEEEeCCcceeEE
Confidence 888889999999999999999999999999999998877665542 23589999999999999999999999999999
Q ss_pred EEEEEEecCC
Q psy16863 835 CFLKLNVPKH 844 (1075)
Q Consensus 835 ~~l~V~~~~~ 844 (1075)
+.|.|..+|.
T Consensus 750 ~~l~V~~~p~ 759 (772)
T 3v2a_R 750 AFFIIEGAQE 759 (772)
T ss_dssp ----------
T ss_pred EEEEEECCCC
Confidence 9999987653
No 9
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=4.9e-49 Score=467.75 Aligned_cols=445 Identities=15% Similarity=0.207 Sum_probs=308.4
Q ss_pred EEeCCCceeeEEEEEeecCCCCCCCeeeeec-ceEEecCCeEEEEEEEECCCCCeEEEEeCCEecc-CCCEEEEEeCCCC
Q psy16863 424 AENAVGRSHCSCELSVLVPKAYKAPFFTKEL-EAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIK-AGDIFALTANPKD 501 (1075)
Q Consensus 424 a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~-~~~~~~l~i~~~~ 501 (1075)
+.+..|.......|.|.++|. +.... ...+.+|+.++|.|.+.+ .++|+|++.++. .+....|.|..+.
T Consensus 18 ~~~~~g~~~~~i~l~v~~pP~-----i~~~~~~~~v~~G~~v~l~C~~~~----~v~W~~~~~~~~~~~~~~~L~I~~~~ 88 (524)
T 2ec8_A 18 LRVQTGSSQPSVSPGEPSPPS-----IHPGKSDLIVRVGDEIRLLCTDPG----FVKWTFEILDETNENKQNEWITEKAE 88 (524)
T ss_dssp C--------------CCCCCE-----EESCCSEEECCTTSCEEEEEECTT----EEEEEEESSSCCEEECSSEEEESSCC
T ss_pred hhhhcCCCCCeEEcCCCCCCc-----cCCCCceEEEeCCCeEEEEEeCCc----eEEEcCCCccccccCccceEEEcccc
Confidence 445556666677777877654 33332 334789999999999876 899999998773 2233579999999
Q ss_pred CCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCCc
Q psy16863 502 PSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWPR 581 (1075)
Q Consensus 502 ~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~ 581 (1075)
.+|+|.|+|.|.| |. ..+..|.|.. ++..+ ..+.+..+.+|+.++|.|.+.+.+.+
T Consensus 89 ~~D~G~Y~C~a~n--g~-~~~~~l~V~~-------------------p~~~~-~~~~~~~v~~G~~v~l~C~~~~~~~~- 144 (524)
T 2ec8_A 89 ATNTGKYTCTNKH--GL-SNSIYVFVRD-------------------PAKLF-LVDRSLYGKEDNDTLVRCPLTDPEVT- 144 (524)
T ss_dssp STTCEEEEEEETT--SC-EEEEEEECCC-------------------SSCSB-CCCCCCCEETTSCEEECCCBSCCCCS-
T ss_pred hhhCEEEEEeecC--Cc-ceEEEEEECC-------------------CCccc-ccccceEEEcCCeEEEECcCCCCccc-
Confidence 9999999999999 53 5556666542 22222 45666788999999999999987645
Q ss_pred eEEEEe-CCeEEecCCcEEEEEcCCceEEEEEeeeeecCCc-eEEEEEECCCCceeeeeEEEEEeCCCCcCCCceeeccc
Q psy16863 582 SIYWYN-KEGVVEASDKYHIMADGLGGYSIEINYLEAVDDG-EWKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLK 659 (1075)
Q Consensus 582 ~v~W~~-~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~ 659 (1075)
.+.|++ ++..+..+.++.+..++ .|.|.+++.+|+| .|+|.|.|..|........|.|...+ ..+|.+.....
T Consensus 145 ~v~W~~~~g~~l~~~~~~~~~~~~----~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~-~~~p~i~~~~~ 219 (524)
T 2ec8_A 145 NYSLKGCQGKPLPKDLRFIPDPKA----GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAF-KAVPVVSVSKA 219 (524)
T ss_dssp CEEEECSSSCCCCSSCEEEEETTT----EEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCC-CSCCEEECSCS
T ss_pred eEEEEccCCcCcCCCCceeECCCc----cEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCC-CCCCcEEecCC
Confidence 899998 67777666666655443 7999999999999 99999999877654434566665211 23455544433
Q ss_pred e-eeecCCeEEEEEEEecCCCCe-EEEEECCEEc--CCCC--------------eEEEe--ecCCCceEEEEEEecCceE
Q psy16863 660 A-VMTDDGLVSFECKVVGFPTPT-LQWFKDNEEL--KPGD--------------VYQLT--GTSSLGSYCCVAKNVMGKA 719 (1075)
Q Consensus 660 ~-~~~~g~~~~l~C~v~g~p~p~-v~W~k~g~~l--~~~~--------------~~~~~--~~~d~G~Y~C~a~N~~g~~ 719 (1075)
. .+.+|+.+.|.|.+.|.|.|. ++|+|++..+ .... .+.+. ..+|+|.|+|.|.|..|..
T Consensus 220 ~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~ 299 (524)
T 2ec8_A 220 SYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSA 299 (524)
T ss_dssp EEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEE
T ss_pred cceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCce
Confidence 3 477899999999999999886 9999999873 2211 12222 2379999999999999999
Q ss_pred EEEEEEEEEeccccCchhhhhhhccCCCCCeEEecc---ceeeeecCCeEEEEEEEecCCCCe-EEEEECCEEeecCC-c
Q psy16863 720 ESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGL---KSCQATVNEEFKFTVQVSISPEPK-VSWFRDDQQVVESD-N 794 (1075)
Q Consensus 720 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~g~~~~l~C~v~g~p~p~-v~W~k~g~~i~~~~-~ 794 (1075)
..++.|.|.. +|.+...+ ....+..|+.+.|.|.+.|.|.|. ++|+|+|.++.... +
T Consensus 300 ~~~~~l~V~~------------------~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~ 361 (524)
T 2ec8_A 300 NVTTTLEVVD------------------KGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWED 361 (524)
T ss_dssp EEEEEEEEES------------------SCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCC
T ss_pred EEEEEEEEec------------------cCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccc
Confidence 9999999973 66665433 367899999999999999999999 99999999987665 3
Q ss_pred EEEEEeeC----cEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEE
Q psy16863 795 VKILKETL----GVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKV 870 (1075)
Q Consensus 795 ~~~~~~~~----~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v 870 (1075)
+... ... ....|.|.+++.+|+|.|+|.|.|..|....++.|.|..+| .+..... ..+| +|.|.+
T Consensus 362 ~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P-----~i~~~~~--~~~g---~l~C~~ 430 (524)
T 2ec8_A 362 YPKS-ENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKP-----EILTYDR--LVNG---MLQCVA 430 (524)
T ss_dssp EESC-CSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEE-----EEEEEEC--CSSS---CEEEEE
T ss_pred eeEE-ccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCC-----eEeeccc--CcCc---EEEEEE
Confidence 3322 221 35689999999999999999999999999889999987654 4443332 3455 999999
Q ss_pred EccCCCeeEEEECCEEcC-------------------CCCeeEE--EECCCCceeeEEEEEEEEeCCeeEEEEEEEEEec
Q psy16863 871 IGVPQPTLKWFKDGRELK-------------------AGDIHKI--ISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFE 929 (1075)
Q Consensus 871 ~g~p~p~v~W~k~g~~l~-------------------~~~~~~i--~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 929 (1075)
.|.|.|.|+|+|||..+. ......+ .+......|+|.|+|.|+|.+|.+++++.|.|.+
T Consensus 431 ~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e 510 (524)
T 2ec8_A 431 AGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKG 510 (524)
T ss_dssp EEESCCEEECCCC----------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC--
T ss_pred EeecCCEEEEEECCCcccccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEec
Confidence 999999999999987651 0111111 1333334789999999999999999999999987
Q ss_pred CChhhh
Q psy16863 930 DKSQIE 935 (1075)
Q Consensus 930 ~~~~~~ 935 (1075)
++..-+
T Consensus 511 ~~~~~~ 516 (524)
T 2ec8_A 511 NNKEQI 516 (524)
T ss_dssp ------
T ss_pred CCHHHc
Confidence 655433
No 10
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-46 Score=438.42 Aligned_cols=424 Identities=13% Similarity=0.173 Sum_probs=283.6
Q ss_pred ceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEE
Q psy16863 358 DIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCEL 437 (1075)
Q Consensus 358 ~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l 437 (1075)
.+.|.+|++++|.|.+.+.|...+.|++++..+.....+.. .+.....|.|.+++.+|+|.|+|.|.|..|.......|
T Consensus 57 ~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~-~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v 135 (527)
T 3qs9_E 57 AVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDL-QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTV 135 (527)
T ss_dssp EEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEE
T ss_pred eEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCC-CcceEEEEEECcCChhhCeeEEEEEEeccccEEEEEEE
Confidence 68899999999999999888899999999998866555432 22345679999999999999999999998877655555
Q ss_pred EeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCC-----EEEEEeCCCCCCCcEEEEEEE
Q psy16863 438 SVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGD-----IFALTANPKDPSSLGTYTCEA 512 (1075)
Q Consensus 438 ~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~-----~~~l~i~~~~~~d~G~Y~C~a 512 (1075)
.|. +.. ............++.+.|.|.+.|+|.|.|+|++++..+.... ........+...|+|.|+|.|
T Consensus 136 ~v~--~~~---~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~A 210 (527)
T 3qs9_E 136 SIR--NTL---LYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCA 210 (527)
T ss_dssp EEC----------CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEE
T ss_pred EEC--Cce---eeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCccccccCCcEEEEeeeeccccCCEEEEEEE
Confidence 554 221 1111111224567778999999999999999999988764221 112222334578999999999
Q ss_pred EecceeeEEE-EEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEe-cCCCCceEEEEeCCe
Q psy16863 513 VNCMGAAFST-SRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVL-VPPWPRSIYWYNKEG 590 (1075)
Q Consensus 513 ~n~~g~~~~~-~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~-~~p~p~~v~W~~~~~ 590 (1075)
.|..|..... +.|.|.. +|.+ ++.+..+.+|+.+.|.|.+. +.|.| .|+|++++.
T Consensus 211 ~N~~G~~~~~~~~l~V~~--------------------~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p-~i~W~k~g~ 267 (527)
T 3qs9_E 211 RNELGRECTRLFTIDLNQ--------------------TPQT--TLPQLFLKVGEPLWIRCKAVHVNHGF-GLTWELENK 267 (527)
T ss_dssp ECSSCEEEEECEEEESSS--------------------CCCC--SCCEEEECTTSCEEEEEEEEESSSCC-CEEEECSSS
T ss_pred EeCCCcccceEEEEEEec--------------------cCcc--CCCceEEeCCCeEEEEEEEccCCCCe-EEEEEECCE
Confidence 9999987664 4555431 1112 34567889999999999997 78876 899999998
Q ss_pred EEecCCcEEEEE--cC---CceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecC
Q psy16863 591 VVEASDKYHIMA--DG---LGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDD 665 (1075)
Q Consensus 591 ~i~~~~~~~~~~--~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g 665 (1075)
.+.....+.... .+ .....|.|.+++.+|+|.|+|.|.|. ......|.|..++.+.... ......+.+|
T Consensus 268 ~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~----~~~~~~L~V~~~p~i~~~~--~~~~~~v~~G 341 (527)
T 3qs9_E 268 ALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH----PSQSALVTIVEKGFINATN--SSEDYEIDQY 341 (527)
T ss_dssp CCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE----EEEEEEEEEC--CEEECCC--SCCEECCCTT
T ss_pred ECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC----CCceEEEEEEccCcccccc--CcccEEEcCC
Confidence 876554332211 11 11236999999999999999999998 2244566666543211100 0011235678
Q ss_pred CeEEEEEEEecCCCCeEEEEECCEEcCCCC-------eEEEe--ecCCCceEEEEEEecCceEEEEEEEEEEeccccCch
Q psy16863 666 GLVSFECKVVGFPTPTLQWFKDNEELKPGD-------VYQLT--GTSSLGSYCCVAKNVMGKAESSTQLTIEDIRNHLSE 736 (1075)
Q Consensus 666 ~~~~l~C~v~g~p~p~v~W~k~g~~l~~~~-------~~~~~--~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~ 736 (1075)
+.+.|.|.+.|.|.|.++|+|+|..+..+. .+.+. ..+|+|.|+|.|.|..|....++.|.|.
T Consensus 342 ~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~-------- 413 (527)
T 3qs9_E 342 EEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR-------- 413 (527)
T ss_dssp CCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC----------
T ss_pred CeEEEEEEEEecCCCEEEEEECCEECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEe--------
Confidence 899999999999999999999999886543 34444 3479999999999999999999999887
Q ss_pred hhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCc------E----EEEEeeCcEEE
Q psy16863 737 EDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDN------V----KILKETLGVCH 806 (1075)
Q Consensus 737 ~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~------~----~~~~~~~~~~~ 806 (1075)
.+|.|..... ...|.|.+.|.|.|.|+|+|++........ . ...........
T Consensus 414 ----------~~P~i~~~~~--------~~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (527)
T 3qs9_E 414 ----------RKPQVLAEAS--------ASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSS 475 (527)
T ss_dssp ----------CCCEEEECCC--------CE---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEE
T ss_pred ----------cCCeEEEeCC--------CCEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEE
Confidence 5888876542 235799999999999999998765421110 0 00011111223
Q ss_pred EEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEec
Q psy16863 807 LKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVP 842 (1075)
Q Consensus 807 L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~ 842 (1075)
+.+.-...+|+|.|+|.|.|.+|.+..++.|.|..|
T Consensus 476 s~L~i~~~~d~G~Y~C~A~N~~G~~~~~~~L~V~~p 511 (527)
T 3qs9_E 476 STLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGP 511 (527)
T ss_dssp EECCCCCSSCSCEEEEEEECSSCEEEEEEEC-----
T ss_pred EEEEEEEcCCCEEEEEEEEeCCCCceeEEEEecCCC
Confidence 333333456999999999999999998888876543
No 11
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=6.2e-46 Score=434.79 Aligned_cols=402 Identities=15% Similarity=0.173 Sum_probs=281.0
Q ss_pred eEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCC--------CEEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEE
Q psy16863 456 AILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAG--------DIFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIA 527 (1075)
Q Consensus 456 ~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~--------~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v 527 (1075)
..+.+|++++|.|.+.+.|...+.|++++..+... ....|.|.++..+|+|.|+|.|.|..|.......+.|
T Consensus 58 ~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~v 137 (527)
T 3qs9_E 58 VEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSI 137 (527)
T ss_dssp EEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEE
T ss_pred EEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCCCcceEEEEEECcCChhhCeeEEEEEEeccccEEEEEEEEE
Confidence 44889999999999998888899999999975432 2345999999999999999999999988777666666
Q ss_pred eccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEecCCcEEEEEcCCce
Q psy16863 528 RGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEASDKYHIMADGLGG 607 (1075)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~ 607 (1075)
.. ..+...........|+.+.|.|.+.|.|.| .|.|++++..+..... .....
T Consensus 138 ~~---------------------~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P-~i~W~~~~~~~~~~~~-----~~~~~ 190 (527)
T 3qs9_E 138 RN---------------------TLLYTLRRPYFRKMENQDALVCISESVPEP-IVEWVLCDSQGESCKE-----ESPAV 190 (527)
T ss_dssp C--------------------------CEEEEEEEECSSSSCEEEEEEESSCC-EEEEEEC------------------C
T ss_pred CC---------------------ceeeccCCCcEEecCCceEEEEEEceecCC-eEEEEECCCCCccccc-----cCCcE
Confidence 41 111111222334567888999999999988 8999998876532111 11112
Q ss_pred EEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEEe-cCCCCeEEEEE
Q psy16863 608 YSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKVV-GFPTPTLQWFK 686 (1075)
Q Consensus 608 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v~-g~p~p~v~W~k 686 (1075)
.......+...|+|.|+|.|.|..|........+.|..++.. +| ....+.+|+.+.|.|.+. |.|.|.|+|+|
T Consensus 191 ~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~-~p-----~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k 264 (527)
T 3qs9_E 191 VKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT-TL-----PQLFLKVGEPLWIRCKAVHVNHGFGLTWEL 264 (527)
T ss_dssp EEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCC-SC-----CEEEECTTSCEEEEEEEEESSSCCCEEEEC
T ss_pred EEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEeccCcc-CC-----CceEEeCCCeEEEEEEEccCCCCeEEEEEE
Confidence 233344566889999999999999987654455666554433 11 133567899999999997 89999999999
Q ss_pred CCEEcCCCCeE-----------------EEe--ecCCCceEEEEEEecCceEEEEEEEEEEeccccCchhhhhhhccCCC
Q psy16863 687 DNEELKPGDVY-----------------QLT--GTSSLGSYCCVAKNVMGKAESSTQLTIEDIRNHLSEEDKLLLLTNNK 747 (1075)
Q Consensus 687 ~g~~l~~~~~~-----------------~~~--~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~ 747 (1075)
+|..+..+..+ .+. ..+|+|.|+|.|.|. ...++.|.|..
T Consensus 265 ~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~------------------ 323 (527)
T 3qs9_E 265 ENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVE------------------ 323 (527)
T ss_dssp SSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC-------------------
T ss_pred CCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEc------------------
Confidence 99877654322 222 237999999999997 56677787763
Q ss_pred CCeEEecc--ceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 748 APKFIEGL--KSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 748 ~p~~~~~~--~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
+|.+.... ....+.+|+.+.|.|.+.|.|.|.|+|+|||++|..+.++.. ....|.|.+++.+|+|.|+|.|.
T Consensus 324 ~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~-----~~~~L~I~~v~~~D~G~YtC~A~ 398 (527)
T 3qs9_E 324 KGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLD-----NGYSISKFCNHKHQPGEYIFHAE 398 (527)
T ss_dssp -CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCS-----SSSEEEEECCCTTCCSCEEEEEE
T ss_pred cCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCccccc-----CCcEEEEecCCcccCEEEEEEEE
Confidence 44443322 346688999999999999999999999999999977655321 22479999999999999999999
Q ss_pred eCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCC----------------
Q psy16863 826 NDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKA---------------- 889 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~---------------- 889 (1075)
|..|....++.|.|..+ |.+.... .| ..|.|.+.|.|.|.|+|+|++.....
T Consensus 399 N~~g~~~~~~~L~V~~~-----P~i~~~~-----~~--~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (527)
T 3qs9_E 399 NDDAQFTKMFTLNIRRK-----PQVLAEA-----SA--SQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANR 466 (527)
T ss_dssp ETTEEEEEEEEEC--CC-----CEEEECC-----CC--E---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC----
T ss_pred eCCCcEEEEEEEEEecC-----CeEEEeC-----CC--CEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceecccc
Confidence 99999999998888864 4444332 12 36899999999999999998654311
Q ss_pred ---CC-eeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEe
Q psy16863 890 ---GD-IHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGF 928 (1075)
Q Consensus 890 ---~~-~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 928 (1075)
+. .....+......|+|.|+|.|.|.+|.++..+.|.|.
T Consensus 467 ~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G~~~~~~~L~V~ 509 (527)
T 3qs9_E 467 KVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSP 509 (527)
T ss_dssp -----CEEEEECCCCCSSCSCEEEEEEECSSCEEEEEEEC---
T ss_pred ccCCceEEEEEEEEEEcCCCEEEEEEEEeCCCCceeEEEEecC
Confidence 00 1111222223458999999999999999998888653
No 12
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=3.5e-46 Score=434.37 Aligned_cols=408 Identities=15% Similarity=0.175 Sum_probs=300.1
Q ss_pred ceEEecCCeEEEEEEEECCCCCeE-----EEEeCCEeccCCCEEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEec
Q psy16863 455 EAILTEQGTVSLECKVMGIPTPQL-----IWYKDNKKIKAGDIFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARG 529 (1075)
Q Consensus 455 ~~~~~~g~~v~l~C~~~g~p~~~v-----~W~~~g~~l~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~ 529 (1075)
...+.+|+++.|.|.+.| |.|.+ .|+|++..+.......|.|.++.. |+| |+|.|.|..+.....+.|.|..
T Consensus 8 ~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~~~~~~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~~l~V~~ 84 (450)
T 1z7z_I 8 KVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPGNNRKVYELSNVQE-DSQ-PMCYSNCPDGQSTAKTFLTVYW 84 (450)
T ss_dssp EEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSSTTTEEEEEEEEECS-CBC-CEEEEEETTEEEEEECEEEEEB
T ss_pred ceEEecCCcEEEEEEccC-CCcccccccceeeecceEecCCCceEEEEEeccc-CCe-eEEEEeCCCCcceeEEEEEEEe
Confidence 345789999999999999 88988 999999877766777888888876 999 9999998878777788888862
Q ss_pred cccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCCc--eEEEEeCCeEEecCCcEEEEEcCCce
Q psy16863 530 QQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWPR--SIYWYNKEGVVEASDKYHIMADGLGG 607 (1075)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~--~v~W~~~~~~i~~~~~~~~~~~~~~~ 607 (1075)
+|..+...+.+..+.+|+.++|.|.+.+.|.|. .|.|++++..+....... ....
T Consensus 85 -------------------~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~----~~~~ 141 (450)
T 1z7z_I 85 -------------------TPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVG----EPAE 141 (450)
T ss_dssp -------------------CCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCT----TTEE
T ss_pred -------------------CCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccc----cccc
Confidence 344455566778899999999999999988654 799999999886443211 1223
Q ss_pred EEEEEeeeeecCCceEEEEEECCCCceee-------eeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEEecC-C-
Q psy16863 608 YSIEINYLEAVDDGEWKCVATSSSGVKQF-------SAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKVVGF-P- 678 (1075)
Q Consensus 608 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~-------~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v~g~-p- 678 (1075)
..|.|.++..+|+|.|+|.|.|..|.... ....+.|...+ ..+|.+... ..+.+|+.+.|.|.+.|. |
T Consensus 142 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~-~~~p~~~~~--~~v~~G~~v~l~C~~~g~~P~ 218 (450)
T 1z7z_I 142 VTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLP-ATPPQLVSP--RVLEVDTQGTVVCSLDGLFPV 218 (450)
T ss_dssp EEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCC-SSCCEEECC--SEEETTSEEEEEEEEESCTTG
T ss_pred eEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccC-CCCCEecCc--eeEEeCCcEEEEEEeeCCCCC
Confidence 58999999999999999999999774321 12234444331 234444332 357789999999999998 7
Q ss_pred -CCeEEEEECCEEcCCC-----CeEEEe-----ecCCCc--eEEEEEEecCceEEEEEEEEEEeccccCchhhhhhhccC
Q psy16863 679 -TPTLQWFKDNEELKPG-----DVYQLT-----GTSSLG--SYCCVAKNVMGKAESSTQLTIEDIRNHLSEEDKLLLLTN 745 (1075)
Q Consensus 679 -~p~v~W~k~g~~l~~~-----~~~~~~-----~~~d~G--~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~ 745 (1075)
.+.++|+++|..+... +.+.+. ..+|.| .|+|.|.|..|....++.|.|...
T Consensus 219 ~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~--------------- 283 (450)
T 1z7z_I 219 SEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSF--------------- 283 (450)
T ss_dssp GGCEEEEEETTEECCCEEEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECC---------------
T ss_pred CceEEEEeCCCEeCCceEEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecC---------------
Confidence 7899999999987652 222221 357999 999999999999999999998853
Q ss_pred CCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 746 NKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 746 ~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
.+|.+.. ....+.+|+.+.|.|.+. |.|.++| +|.++.... ....|.|.++..+|+|.|+|.|.
T Consensus 284 -~~p~i~~--~~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~~~---------~~~~L~i~~~~~~d~G~Y~C~a~ 347 (450)
T 1z7z_I 284 -PAPNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG---------PRAQLLLKATPEDNGRSFSCSAT 347 (450)
T ss_dssp -CCCEEEE--SCSEEETTCEEEEEEEC--------------------C---------CCCCEEEECCGGGTTCEEEEEEE
T ss_pred -CCCeEec--CCeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCCCC---------ceEEEEEecCcccCCceEEEEEE
Confidence 2455543 345789999999999998 9999999 888772211 12379999999999999999999
Q ss_pred eCCc-e---EEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCC-CCeeEEEECCC
Q psy16863 826 NDFG-Q---SITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKA-GDIHKIISGED 900 (1075)
Q Consensus 826 N~~G-~---~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~-~~~~~i~~~~~ 900 (1075)
|..| . ...++.|.|..+|.+..... +....+.+|+.++|.|.+.|.|.|.|+|+|||..+.. |... ..
T Consensus 348 n~~~g~~~~~~~~~~l~V~~~P~~~~~~~--p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g~~~-----~v 420 (450)
T 1z7z_I 348 LEVAGQLIHKNQTRELRVLYGPRLDERDC--PGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESV-----TV 420 (450)
T ss_dssp EEETTEEEEEEEEEECEEEEEEECCSTTS--CSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTTSCE-----EC
T ss_pred cCCCCcccccceeEEEEEecCCceeeccC--CCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCCCCeE-----eE
Confidence 7665 3 34678888887765433210 1122477899999999999999999999999985443 4332 24
Q ss_pred CceeeEEEEEEEEeCCeeEEEEEEEEEec
Q psy16863 901 GTCCLGIYTCEAHNCMGTTSSSAALLGFE 929 (1075)
Q Consensus 901 ~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 929 (1075)
...|+|.|+|.|.|.+|.+++++.|.|..
T Consensus 421 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 449 (450)
T 1z7z_I 421 TRDLEGTYLCRARSTQGEVTREVTVNVLS 449 (450)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ehhhCeEEEEEEEeCCCceeEEEEEEEEc
Confidence 55789999999999999999999998864
No 13
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=6e-45 Score=439.33 Aligned_cols=421 Identities=16% Similarity=0.229 Sum_probs=318.2
Q ss_pred eEEecCCeEEEEEEEECCCCC---eEEEEeCCEecc-------------------------CCCEEEEEeCCCCCCCcEE
Q psy16863 456 AILTEQGTVSLECKVMGIPTP---QLIWYKDNKKIK-------------------------AGDIFALTANPKDPSSLGT 507 (1075)
Q Consensus 456 ~~~~~g~~v~l~C~~~g~p~~---~v~W~~~g~~l~-------------------------~~~~~~l~i~~~~~~d~G~ 507 (1075)
..+.+|+.+.|.|.+.+.|.+ .+.|+|++..+. .+..+.|.|.++..+|+|.
T Consensus 10 v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~ 89 (585)
T 2ocw_A 10 VNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGR 89 (585)
T ss_pred eEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcccCEE
Confidence 347899999999999987654 899999985321 1223568999999999999
Q ss_pred EEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEe
Q psy16863 508 YTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYN 587 (1075)
Q Consensus 508 Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~ 587 (1075)
|+|.|.|..|.....+.|.|.. +|.+...+....+.+|+.++|.|.+.+.+.+..+.|++
T Consensus 90 Y~C~~~n~~~~~~~~~~l~V~~--------------------~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k 149 (585)
T 2ocw_A 90 YKCGLGINSRGLSFDVSLEVSQ--------------------GPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYK 149 (585)
T ss_pred EEEEcccCCCCceEEEEEEEec--------------------CccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEE
Confidence 9999999998888888888862 34555567778899999999999999766555899999
Q ss_pred CCeEEe----c---------CCcEEEEEcCC--ceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEEeCCCCcCCC
Q psy16863 588 KEGVVE----A---------SDKYHIMADGL--GGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHVLMPKNYRKP 652 (1075)
Q Consensus 588 ~~~~i~----~---------~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p 652 (1075)
++.... . ..++.+..++. +.+.|.|.+++.+|+|.|+|.|.|..|... ....|.|..++ |
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~~----p 224 (585)
T 2ocw_A 150 QIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNK-KNADLQVLKPE----P 224 (585)
T ss_pred CCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCcccc-ceEEEEEccCC----C
Confidence 886421 1 24555554442 346899999999999999999999988754 34566666542 2
Q ss_pred ceeeccceeeecCCeEEEEEEEecCCC---CeEEEE-ECCEE---cC---------CCC-------------eEEEe--e
Q psy16863 653 RFVESLKAVMTDDGLVSFECKVVGFPT---PTLQWF-KDNEE---LK---------PGD-------------VYQLT--G 701 (1075)
Q Consensus 653 ~~~~~~~~~~~~g~~~~l~C~v~g~p~---p~v~W~-k~g~~---l~---------~~~-------------~~~~~--~ 701 (1075)
.++ .+.+|+.+.|.|.+ +.|. +.+.|+ ++|.. +. ... .+.+. .
T Consensus 225 ~~~-----~~~~G~~v~l~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~ 298 (585)
T 2ocw_A 225 ELV-----YEDLRGSVTFHCAL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLR 298 (585)
T ss_pred cee-----EEcCCCcEEEEEEc-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCC
Confidence 221 35578999999997 4444 689997 88731 11 011 22232 2
Q ss_pred cCCCceEEEEEEecCceEE-----EEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCC
Q psy16863 702 TSSLGSYCCVAKNVMGKAE-----SSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISP 776 (1075)
Q Consensus 702 ~~d~G~Y~C~a~N~~g~~~-----~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p 776 (1075)
.+|+|.|+|.|.|. |... ..+.|.|. .+|.+...+....+.+|+.+.|.|.+.|.|
T Consensus 299 ~~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~V~------------------~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p 359 (585)
T 2ocw_A 299 KEDAGRYLCGAHSD-GQLQEGSPIQAWQLFVN------------------EESTIPRSPTVVKGVAGSSVAVLCPYNRKE 359 (585)
T ss_pred hhhCEEEEEEEEcC-CCccccCceeeEEEEEe------------------cccccccCCcceEEEeCCcEEEEEecCCCC
Confidence 36899999999995 5444 67788887 367777777788899999999999999999
Q ss_pred CCeE----EEEE--CCE--Eeec---------CCcEEEEEe-eCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEE
Q psy16863 777 EPKV----SWFR--DDQ--QVVE---------SDNVKILKE-TLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLK 838 (1075)
Q Consensus 777 ~p~v----~W~k--~g~--~i~~---------~~~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~ 838 (1075)
.|.+ +|+| ||. .+.. ..++.+... ..+.+.|.|.+++.+|+|.|+|.| |..|....++.|.
T Consensus 360 ~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~ 438 (585)
T 2ocw_A 360 SKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIK 438 (585)
T ss_pred CccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEE
Confidence 9987 8999 887 5532 345555432 345667999999999999999999 9999988888888
Q ss_pred EEecCCCCCCeeeeecceeecCCCeEEEEEEEE----ccCCCeeEEEECCEEcCCC----------------CeeEEEEC
Q psy16863 839 LNVPKHYKKPKFLEELKAVLSEGGAVNLECKVI----GVPQPTLKWFKDGRELKAG----------------DIHKIISG 898 (1075)
Q Consensus 839 V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~----g~p~p~v~W~k~g~~l~~~----------------~~~~i~~~ 898 (1075)
|..++ |.+.......+.+|+.++|.|.+. |.|.|.|+|+|||.++..+ ....|.+.
T Consensus 439 V~~~~----p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 514 (585)
T 2ocw_A 439 IIEGE----PNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLN 514 (585)
T ss_pred EecCc----cccccCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEEC
Confidence 87642 222222333477999999999997 7788899999999877432 12467778
Q ss_pred CCCceeeEEEEEEEEeCCeeEEEE-EEEEEecCC
Q psy16863 899 EDGTCCLGIYTCEAHNCMGTTSSS-AALLGFEDK 931 (1075)
Q Consensus 899 ~~~~~d~G~Y~C~a~N~~G~~~~~-~~l~v~~~~ 931 (1075)
.....|+|.|+|.|.|.+|...+. +.|.|.+++
T Consensus 515 ~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 515 LVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred CCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 888899999999999999977654 788888765
No 14
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=3.8e-46 Score=442.90 Aligned_cols=454 Identities=17% Similarity=0.199 Sum_probs=317.7
Q ss_pred EEEcCCeeEEEEEEEEEeecCCCcccceeecceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCCceeccCc
Q psy16863 112 TASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFGNR 191 (1075)
Q Consensus 112 ~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~~~~~~~~ 191 (1075)
.+.|..|.....+.|.|. .||.+.....+..+.+|++++|.|.+.+ .+.|++++..+ +
T Consensus 17 ~~~~~~g~~~~~i~l~v~----~pP~i~~~~~~~~v~~G~~v~l~C~~~~--------------~v~W~~~~~~~----~ 74 (524)
T 2ec8_A 17 LLRVQTGSSQPSVSPGEP----SPPSIHPGKSDLIVRVGDEIRLLCTDPG--------------FVKWTFEILDE----T 74 (524)
T ss_dssp CC--------------CC----CCCEEESCCSEEECCTTSCEEEEEECTT--------------EEEEEEESSSC----C
T ss_pred hhhhhcCCCCCeEEcCCC----CCCccCCCCceEEEeCCCeEEEEEeCCc--------------eEEEcCCCccc----c
Confidence 345566655556666554 3577777777889999999999988753 67899988754 1
Q ss_pred EEEEecCCeEEEEEceeccCCCeEEEEEEEcCceeEEEEEEEeeeccCCCCCccccccccceeeccceeEEEEEecCCCc
Q psy16863 192 FRAINRDGRTELNIRRVRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTE 271 (1075)
Q Consensus 192 ~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~ 271 (1075)
..+....|.|.+++.+|+|.|+|.|.| |. +..+.|.|. .+|.+...+.+..+.+|+.++|.|.+.++
T Consensus 75 ----~~~~~~~L~I~~~~~~D~G~Y~C~a~n--g~-~~~~~l~V~----~p~~~~~~~~~~~v~~G~~v~l~C~~~~~-- 141 (524)
T 2ec8_A 75 ----NENKQNEWITEKAEATNTGKYTCTNKH--GL-SNSIYVFVR----DPAKLFLVDRSLYGKEDNDTLVRCPLTDP-- 141 (524)
T ss_dssp ----EEECSSEEEESSCCSTTCEEEEEEETT--SC-EEEEEEECC----CSSCSBCCCCCCCEETTSCEEECCCBSCC--
T ss_pred ----ccCccceEEEcccchhhCEEEEEeecC--Cc-ceEEEEEEC----CCCcccccccceEEEcCCeEEEECcCCCC--
Confidence 122335899999999999999999999 53 566777775 33444467788899999999998887642
Q ss_pred eEEEEecCCCeeeEEecCCCcccc-CCCeEEEeeCCeEEEEEcccCCCCCE-EEEEEEEeCCeeE-EEEEEEEEecCCCC
Q psy16863 272 IKCQFDLNNTIPFSFRAQGDHPIF-GNRFRAINRDGRTELNIRRVRRDDGG-RYSVTASNESGYS-TAKFELSVESQVPD 348 (1075)
Q Consensus 272 ~~c~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~L~I~~~~~~d~G-~Y~C~a~n~~g~~-~~~~~l~V~~~~~~ 348 (1075)
+.+.+.|++.++..+. +.++.+...+ .|.|.+++.+|+| .|+|.|.|..|.. +..+.|.|......
T Consensus 142 --------~~~~v~W~~~~g~~l~~~~~~~~~~~~---~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~ 210 (524)
T 2ec8_A 142 --------EVTNYSLKGCQGKPLPKDLRFIPDPKA---GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKA 210 (524)
T ss_dssp --------CCSCEEEECSSSCCCCSSCEEEEETTT---EEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCS
T ss_pred --------ccceEEEEccCCcCcCCCCceeECCCc---cEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCC
Confidence 3467889886666665 5555444322 7999999999999 9999999987654 34677888644456
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCCCcE-EEEEECCEec--CCCCcEEEEE---cCCEEEEEEcccCCCCceeEEE
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIK-IHWYRNDRKL--EENKIYRTQH---DGNFYFIDLSSVSLFDSGRWTC 422 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~-v~W~k~g~~l--~~~~~~~~~~---~g~~~~L~I~~v~~~d~G~Y~C 422 (1075)
+|.|...+....+.+|+++.|.|.+.+.|.+. |+|+|+|..+ ....+..+.. ......|.|.+++.+|+|.|+|
T Consensus 211 ~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 290 (524)
T 2ec8_A 211 VPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMC 290 (524)
T ss_dssp CCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEE
T ss_pred CCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEE
Confidence 88998888888999999999999999988765 9999999883 3333322221 1234579999999999999999
Q ss_pred EEEeCCCceeeEEEEEeecCCCCCCCeeeeec----ceEEecCCeEEEEEEEECCCCCe-EEEEeCCEeccCCC------
Q psy16863 423 LAENAVGRSHCSCELSVLVPKAYKAPFFTKEL----EAILTEQGTVSLECKVMGIPTPQ-LIWYKDNKKIKAGD------ 491 (1075)
Q Consensus 423 ~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~----~~~~~~g~~v~l~C~~~g~p~~~-v~W~~~g~~l~~~~------ 491 (1075)
.|.|..|....++.|.|..+|. +...+ ...+.+|+.+.|.|.+.|.|.|. |+|+|+|.++....
T Consensus 291 ~a~n~~g~~~~~~~l~V~~~p~-----~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~ 365 (524)
T 2ec8_A 291 YANNTFGSANVTTTLEVVDKGF-----INIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKS 365 (524)
T ss_dssp EEECSSCEEEEEEEEEEESSCE-----EEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESC
T ss_pred EEEecCCceEEEEEEEEeccCc-----eEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEE
Confidence 9999999998888898886653 32222 23488999999999999999998 99999999886543
Q ss_pred --------EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEee
Q psy16863 492 --------IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAK 563 (1075)
Q Consensus 492 --------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 563 (1075)
...|.|..+..+|+|.|+|.|.|..|....++.|.|.. +|.+...+. +.
T Consensus 366 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~--------------------~P~i~~~~~---~~ 422 (524)
T 2ec8_A 366 ENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNT--------------------KPEILTYDR---LV 422 (524)
T ss_dssp CSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECE--------------------EEEEEEEEC---CS
T ss_pred ccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEec--------------------CCeEeeccc---Cc
Confidence 35799999999999999999999999999988888863 344433332 34
Q ss_pred cCCeEEEEEEEecCCCCceEEEEeCCeEEec--------CCc---EEEEEcCCceEEEEEeeeeecCCceEEEEEECCCC
Q psy16863 564 IGTSAILECQVLVPPWPRSIYWYNKEGVVEA--------SDK---YHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSG 632 (1075)
Q Consensus 564 ~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~--------~~~---~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 632 (1075)
+| +|.|.+.|.|.| .|.|+++++.+.. ..+ +....++.......+.....+|+|.|+|.|.|..|
T Consensus 423 ~g---~l~C~~~g~P~p-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G 498 (524)
T 2ec8_A 423 NG---MLQCVAAGFPEP-TIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVG 498 (524)
T ss_dssp SS---CEEEEEEEESCC-EEECCCC----------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSC
T ss_pred Cc---EEEEEEEeecCC-EEEEEECCCcccccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCC
Confidence 56 999999999988 8999999876521 111 11112221111122444446999999999999999
Q ss_pred ceeeeeEEEEEe
Q psy16863 633 VKQFSAAYVHVL 644 (1075)
Q Consensus 633 ~~~~~~~~l~v~ 644 (1075)
..... +.|.|.
T Consensus 499 ~~~~~-~~l~V~ 509 (524)
T 2ec8_A 499 KTSAY-FNFAFK 509 (524)
T ss_dssp EEECC-CCCCC-
T ss_pred ceEEE-EEEEEe
Confidence 87633 344444
No 15
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=5.2e-44 Score=431.13 Aligned_cols=451 Identities=17% Similarity=0.194 Sum_probs=333.9
Q ss_pred eecceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCCce-----e---------ccCcEEEEe--cCCeEEE
Q psy16863 140 RRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHP-----I---------FGNRFRAIN--RDGRTEL 203 (1075)
Q Consensus 140 ~~~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~~~-----~---------~~~~~~~~~--~~~~~~L 203 (1075)
..+.++.+.+|++++|.|.+.+.+. .....+.|++++... . ..+|+.+.. .++.+.|
T Consensus 5 ~~P~~v~v~~G~~v~L~C~~~~~~~-------~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L 77 (585)
T 2ocw_A 5 FGPEEVNSVEGNSVSITCYYPPTSV-------NRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVV 77 (585)
T ss_pred cCcceeEEecCCcEEEEEeCCCCcC-------CCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEE
Confidence 3456788999999999998876421 112478899987532 1 234665544 4566789
Q ss_pred EEceeccCCCeEEEEEEEcCceeEEEEEEEeeeccCCCCCccccccccceeeccceeEEEEEecCCCceEEEEecCCCee
Q psy16863 204 NIRRVRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIP 283 (1075)
Q Consensus 204 ~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~ 283 (1075)
+|.+++.+|+|.|+|.|.|..|..+..+.|.|. .+|.|...+.+..+.+|+.++|.|.+.+. .++..
T Consensus 78 ~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~v~l~C~~~~~---------~~~~~ 144 (585)
T 2ocw_A 78 NIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVS----QGPGLLNDTKVYTVDLGRTVTINCPFKTE---------NAQKR 144 (585)
T ss_pred EECCCCcccCEEEEEEcccCCCCceEEEEEEEe----cCccccCCCccEEEEcCCCEEEEEEecCC---------CCCcc
Confidence 999999999999999999998888888888886 45778888888999999999999887642 12345
Q ss_pred eEEecCCCccc-------------cCCCeEEEeeCC---eEEEEEcccCCCCCEEEEEEEEeCCeeEEEEEEEEEecCCC
Q psy16863 284 FSFRAQGDHPI-------------FGNRFRAINRDG---RTELNIRRVRRDDGGRYSVTASNESGYSTAKFELSVESQVP 347 (1075)
Q Consensus 284 ~~w~~~~~~~~-------------~~~~~~~~~~~~---~~~L~I~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 347 (1075)
+.|+++++... ...++.+...+. ..+|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 145 v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~--- 221 (585)
T 2ocw_A 145 KSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLK--- 221 (585)
T ss_pred EEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEcc---
Confidence 67777765421 134555554442 34899999999999999999999999888888888874
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCC---cEEEEE-ECCEe---c-C--------CCCcEEEEEc--CCEEEEEE
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTE---IKIHWY-RNDRK---L-E--------ENKIYRTQHD--GNFYFIDL 409 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~---~~v~W~-k~g~~---l-~--------~~~~~~~~~~--g~~~~L~I 409 (1075)
.+| ..+.+.+|+.+.|.|.+ +.+. +.+.|+ |||.. + . ...++.+... ...+.|.|
T Consensus 222 ~~p------~~~~~~~G~~v~l~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i 294 (585)
T 2ocw_A 222 PEP------ELVYEDLRGSVTFHCAL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVI 294 (585)
T ss_pred CCC------ceeEEcCCCcEEEEEEc-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEE
Confidence 233 23467899999999998 4443 789997 88842 1 1 1334444432 34457999
Q ss_pred cccCCCCceeEEEEEEeCCCcee-----eEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeE----EE
Q psy16863 410 SSVSLFDSGRWTCLAENAVGRSH-----CSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQL----IW 480 (1075)
Q Consensus 410 ~~v~~~d~G~Y~C~a~n~~g~~~-----~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v----~W 480 (1075)
.+++.+|+|.|+|.|.|. |... .++.|.|..+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+ +|
T Consensus 295 ~~v~~~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~V~~~p~~~~----~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W 369 (585)
T 2ocw_A 295 TGLRKEDAGRYLCGAHSD-GQLQEGSPIQAWQLFVNEESTIPR----SPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLW 369 (585)
T ss_pred ccCChhhCEEEEEEEEcC-CCccccCceeeEEEEEeccccccc----CCcceEEEeCCcEEEEEecCCCCCccEEEEEEE
Confidence 999999999999999996 4443 677888877654321 122234779999999999999999976 79
Q ss_pred Ee--CCE--eccC--------------------CCEEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCC
Q psy16863 481 YK--DNK--KIKA--------------------GDIFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDN 536 (1075)
Q Consensus 481 ~~--~g~--~l~~--------------------~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~ 536 (1075)
+| ||. .+.. ...+.|.|..+..+|+|.|+|.| |..|.....+.|.|..
T Consensus 370 ~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~------- 441 (585)
T 2ocw_A 370 EGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIE------- 441 (585)
T ss_pred EccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEec-------
Confidence 99 887 4421 12235899999999999999999 9999888888888863
Q ss_pred CCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEe----cCCCCceEEEEeCCeEEecCCc------EEEEEcCCc
Q psy16863 537 DDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVL----VPPWPRSIYWYNKEGVVEASDK------YHIMADGLG 606 (1075)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~----~~p~p~~v~W~~~~~~i~~~~~------~~~~~~~~~ 606 (1075)
.+|.+.. +....+.+|+.++|.|.+. +.|.| .|.|++++..+..... +........
T Consensus 442 ------------~~p~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~p~~-~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~ 507 (585)
T 2ocw_A 442 ------------GEPNLKV-PGNVTAVLGETLKVPCHFPCKFSSYEKY-WCKWNNTGCQALPSQDEGPSKAFVNCDENSR 507 (585)
T ss_pred ------------Ccccccc-CCceeEecCCcEEEEEEecCCCCCCccE-EEEEeecCceeeeccCCCCCcceEEecCccc
Confidence 1233322 5677899999999999997 55655 8999999988754321 222222223
Q ss_pred eEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEEeCCC
Q psy16863 607 GYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHVLMPK 647 (1075)
Q Consensus 607 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p~ 647 (1075)
...|.|.++..+|+|.|+|.|.|..|........|.|..++
T Consensus 508 ~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 508 LVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred EEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 46899999999999999999999999877555778887765
No 16
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=5e-44 Score=424.53 Aligned_cols=437 Identities=15% Similarity=0.192 Sum_probs=298.5
Q ss_pred ecCceeeccCCeEEEEEEEecCCCcEEEEEECC--EecC------------CCCcEEEEEcCCEEEEEEcccCCCCceeE
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSPTEIKIHWYRND--RKLE------------ENKIYRTQHDGNFYFIDLSSVSLFDSGRW 420 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g--~~l~------------~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y 420 (1075)
.+..+.+.+|++++|.|.+.+.|.+.|.|||++ ..+. ...++.....+....|.|.+++.+|+|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 85 (523)
T 2rcj_C 6 QPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDY 85 (523)
T ss_pred cCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEE
Confidence 456778999999999999998889999999975 2211 12456555566677899999999999999
Q ss_pred EEEEEeCCCce---eeEEEEEeecCCCCCCCeeeee-cceEEecCCeEEEEEEEECCCCC--eEEEEeCCEeccCCCE--
Q psy16863 421 TCLAENAVGRS---HCSCELSVLVPKAYKAPFFTKE-LEAILTEQGTVSLECKVMGIPTP--QLIWYKDNKKIKAGDI-- 492 (1075)
Q Consensus 421 ~C~a~n~~g~~---~~s~~l~V~~~~~~~~p~~~~~-~~~~~~~g~~v~l~C~~~g~p~~--~v~W~~~g~~l~~~~~-- 492 (1075)
+|.|.|..|.. ...+.|.|...+. .+|.+... ....+.+|+.+.|.|.+.|.|++ .|+|+|||+++..+..
T Consensus 86 ~C~a~n~~g~~~~~~~~~~l~V~~~~~-~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 164 (523)
T 2rcj_C 86 YCASWNSSDNSYVFGTGTKVTVLGQPK-ANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETT 164 (523)
T ss_pred EEEEccCCCccccccCceEEEeccCCC-cCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEec
Confidence 99999987642 2456677754332 23444332 23335678999999999998764 9999999998854321
Q ss_pred -------------EEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccc
Q psy16863 493 -------------FALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVEN 559 (1075)
Q Consensus 493 -------------~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (1075)
..|.|..+..+|+|.|+|.|.|..|.......+.+. ... ..+|.+......
T Consensus 165 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~---------------~~~-~~~P~v~~~~~~ 228 (523)
T 2rcj_C 165 KPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC---------------SAS-TKGPSVFPLAPS 228 (523)
T ss_pred cccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeec---------------CCC-CcCCEEEecCCC
Confidence 258899999999999999999998876555443221 011 123333333334
Q ss_pred eEeecCCeEEEEEEEecC-CCCceEEEEeCCeEEecCCcEEEE-EcCC--ceEEEEEeeeeecCCceEEEEEECCCCcee
Q psy16863 560 VKAKIGTSAILECQVLVP-PWPRSIYWYNKEGVVEASDKYHIM-ADGL--GGYSIEINYLEAVDDGEWKCVATSSSGVKQ 635 (1075)
Q Consensus 560 ~~v~~G~~~~L~C~~~~~-p~p~~v~W~~~~~~i~~~~~~~~~-~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 635 (1075)
..+.+|+.++|.|.+.+. |.|..|+|++++..+.......+. .++. ....|.|.++..+| |.|+|.|.|..|...
T Consensus 229 ~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~ 307 (523)
T 2rcj_C 229 SKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 307 (523)
T ss_pred cccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcc
Confidence 456889999999999987 666689999999875321111111 1111 12379999999999 999999999999854
Q ss_pred eeeEEEEEeCCCCcCCCce-eeccc-e-eeecCCeEEEEEEEecCCC----CeEEEEECCEEcCCCC----------eEE
Q psy16863 636 FSAAYVHVLMPKNYRKPRF-VESLK-A-VMTDDGLVSFECKVVGFPT----PTLQWFKDNEELKPGD----------VYQ 698 (1075)
Q Consensus 636 ~~~~~l~v~~p~~~~~p~~-~~~~~-~-~~~~g~~~~l~C~v~g~p~----p~v~W~k~g~~l~~~~----------~~~ 698 (1075)
.. ..+.+..+ |.+ +.... . .+.+|+.+.|.|.+.|.|+ +.|+|+|+|..+..+. .|.
T Consensus 308 ~~-~~l~v~~~-----P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~ 381 (523)
T 2rcj_C 308 VD-KRVEPLSL-----PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYR 381 (523)
T ss_pred eE-EecCCCcC-----ceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEE
Confidence 32 23333222 222 22211 1 2567999999999998653 4899999999886442 121
Q ss_pred ------Ee--ecCCCceEEEEEEecCceEEEEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEE
Q psy16863 699 ------LT--GTSSLGSYCCVAKNVMGKAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTV 770 (1075)
Q Consensus 699 ------~~--~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C 770 (1075)
+. ..+|+|.|+|.|.|..|.......+.+.. ....+|.+...........|..+.|.|
T Consensus 382 ~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~--------------~~~~~P~v~~~~~~~~~~~~~~~~l~C 447 (523)
T 2rcj_C 382 VVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAK--------------GQPREPQVYTLPPSREEMTKNQVSLTC 447 (523)
T ss_pred EEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEccc--------------CCCCCCEEEEeCCChHHccCCceEEEE
Confidence 11 12689999999999888765555454310 011466655433322223344599999
Q ss_pred EEecCCCC--eEEEEECCEEeecCCcEEEEEeeCcE----EEEEEccccCCCCeEEEEEEEeCCc
Q psy16863 771 QVSISPEP--KVSWFRDDQQVVESDNVKILKETLGV----CHLKIHALEVADQAEWKCIATNDFG 829 (1075)
Q Consensus 771 ~v~g~p~p--~v~W~k~g~~i~~~~~~~~~~~~~~~----~~L~I~~~~~~D~G~Y~C~A~N~~G 829 (1075)
.+.|.|+| .|+|+|||+++.......+....++. ..|.|.....+|+|.|+|.|.|...
T Consensus 448 ~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~~l 512 (523)
T 2rcj_C 448 LVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 512 (523)
T ss_pred EEEeeECCCCEEEEEECCEECCCeeeccceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcCCc
Confidence 99998766 99999999998754433333333332 3466777777899999999999854
No 17
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=2.5e-44 Score=418.69 Aligned_cols=414 Identities=13% Similarity=0.150 Sum_probs=291.7
Q ss_pred eecCceeeccCCeEEEEEEEecCCCcEE-----EEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCC
Q psy16863 354 RRLHDIAVKVGTRARLLVEIRSPTEIKI-----HWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAV 428 (1075)
Q Consensus 354 ~~~~~~~v~~G~~v~l~C~~~g~p~~~v-----~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~ 428 (1075)
..+.+..+.+|++++|.|.+.| |.+.+ .|+|++..+.. .....|.|.+++. |+| |+|.|.|..
T Consensus 4 ~~P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~---------~~~~~l~i~~v~~-d~g-Y~C~a~~~~ 71 (450)
T 1z7z_I 4 VSPSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPG---------NNRKVYELSNVQE-DSQ-PMCYSNCPD 71 (450)
T ss_dssp EESSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSST---------TTEEEEEEEEECS-CBC-CEEEEEETT
T ss_pred cCCCceEEecCCcEEEEEEccC-CCcccccccceeeecceEecC---------CCceEEEEEeccc-CCe-eEEEEeCCC
Confidence 3557788999999999999988 88888 99999876543 2233688999987 999 999998877
Q ss_pred CceeeEEEEEeecCCCCCCCeeeeecc-eEEecCCeEEEEEEEECCCCC---eEEEEeCCEeccCC------CEEEEEeC
Q psy16863 429 GRSHCSCELSVLVPKAYKAPFFTKELE-AILTEQGTVSLECKVMGIPTP---QLIWYKDNKKIKAG------DIFALTAN 498 (1075)
Q Consensus 429 g~~~~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~v~l~C~~~g~p~~---~v~W~~~g~~l~~~------~~~~l~i~ 498 (1075)
+..+.++.|.|..+|. .+...+. ..+.+|+.+.|.|.+.|.|++ .|+|+|+|+++... ....|.|.
T Consensus 72 ~~~~~~~~l~V~~~P~----~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~~L~i~ 147 (450)
T 1z7z_I 72 GQSTAKTFLTVYWTPE----RVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVL 147 (450)
T ss_dssp EEEEEECEEEEEBCCS----EEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEE
T ss_pred CcceeEEEEEEEeCCC----cceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccceEEEEE
Confidence 7777778888887543 3323333 458899999999999998888 99999999988643 24589999
Q ss_pred CCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecC-
Q psy16863 499 PKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVP- 577 (1075)
Q Consensus 499 ~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~- 577 (1075)
.+..+|+|.|+|.|.|..|.......+.+..... ......+..+|.+.. ...+.+|+.++|.|.+.+.
T Consensus 148 ~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~--------l~v~~~~~~~p~~~~---~~~v~~G~~v~l~C~~~g~~ 216 (450)
T 1z7z_I 148 VRRDHHGANFSCRTELDLRPQGLELFENTSAPYQ--------LQTFVLPATPPQLVS---PRVLEVDTQGTVVCSLDGLF 216 (450)
T ss_dssp CCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEE--------CEECCCCSSCCEEEC---CSEEETTSEEEEEEEEESCT
T ss_pred eeccccCceEEEEEEcccCCCCceEEeeccCccc--------eeeeccCCCCCEecC---ceeEEeCCcEEEEEEeeCCC
Confidence 9999999999999999977533211111110000 000000112233322 2678899999999999998
Q ss_pred C--CCceEEEEeCCeEEecCCcEEEEEcCCceEEEE-EeeeeecCCc--eEEEEEECCCCceeeeeEEEEEeCCCCcCCC
Q psy16863 578 P--WPRSIYWYNKEGVVEASDKYHIMADGLGGYSIE-INYLEAVDDG--EWKCVATSSSGVKQFSAAYVHVLMPKNYRKP 652 (1075)
Q Consensus 578 p--~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~-i~~~~~~d~G--~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p 652 (1075)
| .+ .+.|++++..+.. ++.. .+. ...+. ..++..+|+| .|+|.|.|..|.... ...+.|..++. |
T Consensus 217 P~~~~-~~~W~~~~~~~~~--~~~~--~~~-~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~-~~~l~V~~~~~---p 286 (450)
T 1z7z_I 217 PVSEA-QVHLALGDQRLNP--TVTY--GND-SFSAKASVSVTAEDEGTQRLTCAVILGNQSQET-LQTVTIYSFPA---P 286 (450)
T ss_dssp TGGGC-EEEEEETTEECCC--EEEE--ETT-EEEEEEEEECCGGGCEEEEEEEEEEETTEEEEE-EEEEEEECCCC---C
T ss_pred CCCce-EEEEeCCCEeCCc--eEEe--cCC-ceeEEEEEEeEhhhCCcEEEEEEEccCCccEEE-EEEEEEecCCC---C
Confidence 5 44 8999999988754 2322 221 12221 2277999999 999999999887653 45677766432 5
Q ss_pred ceeeccceeeecCCeEEEEEEEecCCCCeEEEEECCEEc-CCCC--eEEEe--ecCCCceEEEEEEecCc----eEEEEE
Q psy16863 653 RFVESLKAVMTDDGLVSFECKVVGFPTPTLQWFKDNEEL-KPGD--VYQLT--GTSSLGSYCCVAKNVMG----KAESST 723 (1075)
Q Consensus 653 ~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~l-~~~~--~~~~~--~~~d~G~Y~C~a~N~~g----~~~~~~ 723 (1075)
.+... ...+.+|+.++|.|.+. |.|.++| +|..+ ..+. .+.+. ..+|+|.|+|.|.|..| ....++
T Consensus 287 ~i~~~-~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~ 361 (450)
T 1z7z_I 287 NVILT-KPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTR 361 (450)
T ss_dssp EEEES-CSEEETTCEEEEEEEC--------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEE
T ss_pred eEecC-CeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCCCCceEEEEEecCcccCCceEEEEEEcCCCCcccccceeE
Confidence 55433 33678899999999997 8889999 77777 2332 34443 34799999999998666 334667
Q ss_pred EEEEEeccccCchhhhhhhccCCCCCeEEecc--ceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEee
Q psy16863 724 QLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGL--KSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKET 801 (1075)
Q Consensus 724 ~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~ 801 (1075)
.|.|.. +|.+.... .+..+.+|+.+.|.|.+.|.|.|.|+|+|+|..+..+..
T Consensus 362 ~l~V~~------------------~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g~------- 416 (450)
T 1z7z_I 362 ELRVLY------------------GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGE------- 416 (450)
T ss_dssp ECEEEE------------------EEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTTS-------
T ss_pred EEEEec------------------CCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCCCC-------
Confidence 788763 55555543 567889999999999999999999999999985543321
Q ss_pred CcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEe
Q psy16863 802 LGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNV 841 (1075)
Q Consensus 802 ~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~ 841 (1075)
.| +++.+|+|.|+|.|.|.+|.+..++.|.|+.
T Consensus 417 ----~~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 449 (450)
T 1z7z_I 417 ----SV---TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 449 (450)
T ss_dssp ----CE---ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ----eE---eEehhhCeEEEEEEEeCCCceeEEEEEEEEc
Confidence 12 5788999999999999999999999999875
No 18
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=3.2e-43 Score=417.59 Aligned_cols=454 Identities=14% Similarity=0.134 Sum_probs=307.6
Q ss_pred eecceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCC--cee------------ccCcEEEEecCCeEEEEE
Q psy16863 140 RRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGD--HPI------------FGNRFRAINRDGRTELNI 205 (1075)
Q Consensus 140 ~~~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~--~~~------------~~~~~~~~~~~~~~~L~I 205 (1075)
..+.++.+.+|++++|.|.+.+ .+.+.+.|++++. .+. ...|+.....++...|.|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~----------~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 74 (523)
T 2rcj_C 5 TQPPSASGTPGQRVTISCTGTS----------SGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAI 74 (523)
T ss_pred ccCCceEEecCCcEEEEEEEec----------cCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEE
Confidence 3345678999999999888754 3456788888641 111 135666555566779999
Q ss_pred ceeccCCCeEEEEEEEcCceeE---EEEEEEeeeccCCCCCccccccccceeeccceeEEEEEecCCCceEEEEecCCCe
Q psy16863 206 RRVRRDDGGRYSVTASNESGYS---TAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTI 282 (1075)
Q Consensus 206 ~~~~~~D~G~Y~C~a~n~~g~~---~~~~~l~V~~~~~~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~ 282 (1075)
.+++.+|+|.|+|.|.|..|.. ...+.|.|......+|.+...+....+.+|+.++|.|.+.+.+ .+++
T Consensus 75 ~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~--------p~~~ 146 (523)
T 2rcj_C 75 SGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFY--------PGAV 146 (523)
T ss_pred CCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEecccc--------CCce
Confidence 9999999999999999987632 3456777754333556666666666777899999988776421 0124
Q ss_pred eeEEecCCCccccCCCeEE--EeeCCe----EEEEEcccCCCCCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeec
Q psy16863 283 PFSFRAQGDHPIFGNRFRA--INRDGR----TELNIRRVRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRL 356 (1075)
Q Consensus 283 ~~~w~~~~~~~~~~~~~~~--~~~~~~----~~L~I~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~ 356 (1075)
.+.|++++..+..+.++.. ...++. ..|.|.+++.+|+|.|+|.|.|..|.....+.+.+......+|.+....
T Consensus 147 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~ 226 (523)
T 2rcj_C 147 TVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLA 226 (523)
T ss_pred EEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecC
Confidence 7888886654433322211 111221 3699999999999999999999988765555554333334566666444
Q ss_pred CceeeccCCeEEEEEEEecC-CCc-EEEEEECCEecCCCCcEEEE-EcCC---EEEEEEcccCCCCceeEEEEEEeCCCc
Q psy16863 357 HDIAVKVGTRARLLVEIRSP-TEI-KIHWYRNDRKLEENKIYRTQ-HDGN---FYFIDLSSVSLFDSGRWTCLAENAVGR 430 (1075)
Q Consensus 357 ~~~~v~~G~~v~l~C~~~g~-p~~-~v~W~k~g~~l~~~~~~~~~-~~g~---~~~L~I~~v~~~d~G~Y~C~a~n~~g~ 430 (1075)
....+.+|+.+.|.|.+.|. |.+ .|+|+|+|..+.......+. .+|. ...|.|.++..+| |.|+|.|.|..|.
T Consensus 227 ~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~ 305 (523)
T 2rcj_C 227 PSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 305 (523)
T ss_pred CCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCC
Confidence 45567899999999999886 766 89999999876432111111 2222 2479999999999 9999999999998
Q ss_pred eeeEEEEEeecCCCCCCCeeeeecc-e-EEecCCeEEEEEEEECCCC----CeEEEEeCCEeccCCC----------E--
Q psy16863 431 SHCSCELSVLVPKAYKAPFFTKELE-A-ILTEQGTVSLECKVMGIPT----PQLIWYKDNKKIKAGD----------I-- 492 (1075)
Q Consensus 431 ~~~s~~l~V~~~~~~~~p~~~~~~~-~-~~~~g~~v~l~C~~~g~p~----~~v~W~~~g~~l~~~~----------~-- 492 (1075)
......|.|...|. .+...+. . .+.+|+.+.|.|.+.|.|+ +.|+|+|||.++.... .
T Consensus 306 ~~~~~~l~v~~~P~----~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~ 381 (523)
T 2rcj_C 306 TKVDKRVEPLSLPS----VFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYR 381 (523)
T ss_pred cceEEecCCCcCce----EEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEE
Confidence 77666666543321 2222222 2 2678999999999998654 4999999999985432 1
Q ss_pred --EEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeee-eeccceEeecCCeEE
Q psy16863 493 --FALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFI-KEVENVKAKIGTSAI 569 (1075)
Q Consensus 493 --~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~G~~~~ 569 (1075)
..|.|..+..+|+|.|+|.|.|..|.......+.+.. .. ..+|.+. ..+....+..| .++
T Consensus 382 ~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~---------------~~-~~~P~v~~~~~~~~~~~~~-~~~ 444 (523)
T 2rcj_C 382 VVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAK---------------GQ-PREPQVYTLPPSREEMTKN-QVS 444 (523)
T ss_pred EEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEccc---------------CC-CCCCEEEEeCCChHHccCC-ceE
Confidence 2477888888999999999999887765554444310 01 1233333 33333334444 499
Q ss_pred EEEEEecCCCC-ceEEEEeCCeEEecCCcEEEEEcCCceE----EEEEeeeeecCCceEEEEEECCCCc
Q psy16863 570 LECQVLVPPWP-RSIYWYNKEGVVEASDKYHIMADGLGGY----SIEINYLEAVDDGEWKCVATSSSGV 633 (1075)
Q Consensus 570 L~C~~~~~p~p-~~v~W~~~~~~i~~~~~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~g~ 633 (1075)
|.|.+.+.|+| ..+.|+++|..+..........++.+.+ .|.|......|+|.|+|.|.|....
T Consensus 445 l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~~l~ 513 (523)
T 2rcj_C 445 LTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 513 (523)
T ss_pred EEEEEEeeECCCCEEEEEECCEECCCeeeccceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcCCcC
Confidence 99999986544 4899999998886443333322332322 3555555567899999999998644
No 19
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=8.6e-44 Score=405.72 Aligned_cols=393 Identities=12% Similarity=0.133 Sum_probs=240.3
Q ss_pred CCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCCc
Q psy16863 502 PSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWPR 581 (1075)
Q Consensus 502 ~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~ 581 (1075)
..|.|.|+|.+.+..+...+.. +.+.-. .++.....+.-...+. .+.++..+..+.+.+|+.+.|.|.+.+.|.|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~l~c~~~p~-~~~~~~~~~~v~V~~G~~v~L~C~v~g~P~p- 78 (423)
T 3qs7_E 4 NQDLPVIKCVLINHKNNDSSVG-KSSSYP--MVSESPEDLGCALRPQ-SSGTVYEAAAVEVDVSASITLQVLVDAPGNI- 78 (423)
T ss_dssp --------------------------------------------------------CEEEECSSCCEEEEEECSCCSSC-
T ss_pred cCCCCeeEEEEEeccCCCcccc-ccccch--hhhCCHHHcCCccCCC-CCcceeccccEEEecCCcEEEEEEEEcCCCC-
Confidence 3578999999998755442221 111100 0000000010011111 1223334458899999999999999998877
Q ss_pred eEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEEeCCCCcCCCceeecccee
Q psy16863 582 SIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAV 661 (1075)
Q Consensus 582 ~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~ 661 (1075)
.|.|++++..+.....+ ..+......|.|.+++.+|+|.|+|.|.|..|.... ...|.|..++. +.......
T Consensus 79 ~i~W~~~~~~l~~~~~~--~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~-~~~l~V~~~p~-----~~~~~p~~ 150 (423)
T 3qs7_E 79 SCLWVFKHSSLNCQPHF--DLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTI-LFTVSIRNTLL-----YTLRRPYF 150 (423)
T ss_dssp EEEEEETTEEECCCCBC-------CEEEEEESSCCSSSCSEEEEEEEC--CEEEE-EEEEEEC----------CEEEEEE
T ss_pred eEEEEECCCccCcccee--ccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEE-EEEEEEecCcc-----ccccCCcE
Confidence 89999999887653332 122223457999999999999999999999987653 34566654332 21111123
Q ss_pred eecCCeEEEEEEEecCCCCeEEEEECCEEcCCC-----CeEE----EeecCCCceEEEEEEecCceEEEE-EEEEEEecc
Q psy16863 662 MTDDGLVSFECKVVGFPTPTLQWFKDNEELKPG-----DVYQ----LTGTSSLGSYCCVAKNVMGKAESS-TQLTIEDIR 731 (1075)
Q Consensus 662 ~~~g~~~~l~C~v~g~p~p~v~W~k~g~~l~~~-----~~~~----~~~~~d~G~Y~C~a~N~~g~~~~~-~~l~V~~~~ 731 (1075)
...|+.+.|.|.+.|.|.|.|+|+|++..+... ..+. +....|+|.|+|.|.|..|..... +.|.|.
T Consensus 151 ~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~--- 227 (423)
T 3qs7_E 151 RKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLN--- 227 (423)
T ss_dssp EECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESS---
T ss_pred eccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEcCCCCcceeeEEEEEe---
Confidence 445777899999999999999999988755321 0011 113478999999999999987653 555554
Q ss_pred ccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEec-CCCCeEEEEECCEEeecCCcEEEEEe-----eCcEE
Q psy16863 732 NHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSI-SPEPKVSWFRDDQQVVESDNVKILKE-----TLGVC 805 (1075)
Q Consensus 732 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g-~p~p~v~W~k~g~~i~~~~~~~~~~~-----~~~~~ 805 (1075)
.+|.+ .+.+..+.+|+.+.|.|.+.| .|.|.|+|+|+|..+.....+..... .....
T Consensus 228 ---------------~~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~ 290 (423)
T 3qs7_E 228 ---------------QTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRIL 290 (423)
T ss_dssp ---------------SCCCS--STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEE
T ss_pred ---------------cCCcc--CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEE
Confidence 23333 334677899999999999998 67799999999998866543322111 11134
Q ss_pred EEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeee-cceeecCCCeEEEEEEEEccCCCeeEEEECC
Q psy16863 806 HLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEE-LKAVLSEGGAVNLECKVIGVPQPTLKWFKDG 884 (1075)
Q Consensus 806 ~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~-~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g 884 (1075)
.|.|.+++.+|+|.|+|.|.|. ...++.|.|..++.+.. ... ....+.+|+.+.|.|.+.|.|.|.|+|+|||
T Consensus 291 ~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~---~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g 364 (423)
T 3qs7_E 291 FAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINA---TNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSR 364 (423)
T ss_dssp EEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCEEEE---C---CEECCCTTCCCCEEEEEEEESCCEEEEEETT
T ss_pred EEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCcceE---cCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECC
Confidence 7999999999999999999998 66788888886543211 111 1223678999999999999999999999999
Q ss_pred EEcCCCC-----eeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEecCChh
Q psy16863 885 RELKAGD-----IHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFEDKSQ 933 (1075)
Q Consensus 885 ~~l~~~~-----~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~ 933 (1075)
.+|..+. .+.+........|+|.|+|.|+|.+|+++.++.|.|...|..
T Consensus 365 ~~l~~~~~~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~ 418 (423)
T 3qs7_E 365 KSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKH 418 (423)
T ss_dssp EEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-------
T ss_pred EECCCccccccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCcc
Confidence 9997653 445533445667999999999999999999999998766544
No 20
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=2.8e-40 Score=374.80 Aligned_cols=350 Identities=21% Similarity=0.335 Sum_probs=255.7
Q ss_pred CCeeeeeccceEe---ecCCeEEEEEEEecCCCCceEEEEeCCeEEecCCcEEEE-EcCCceEEEEEeee-eecCCceEE
Q psy16863 550 APIFIKEVENVKA---KIGTSAILECQVLVPPWPRSIYWYNKEGVVEASDKYHIM-ADGLGGYSIEINYL-EAVDDGEWK 624 (1075)
Q Consensus 550 ~~~~~~~~~~~~v---~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~~~~~~~-~~~~~~~~L~i~~~-~~~d~G~Y~ 624 (1075)
+|.|...|.+..+ .+|+.+.|.|.+.|.|.| .|+|+|+|..+..+...++. .++ .|.|.+. ..+|+|.|+
T Consensus 5 ~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p-~i~W~k~g~~l~~~~~~~~~~~~g----~l~i~~~~~~~D~G~Y~ 79 (384)
T 3kld_A 5 GPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKP-HIRWKLNGTDVDIGMDFRYSVVDG----SLLINNPNKTQDAGTYQ 79 (384)
T ss_dssp EEEEEECCCCEEEETTCSCSEEEECCEEEEESCC-EEEEEETTEECCC----CEEEETT----EEEEESCCHHHHCEEEE
T ss_pred CCEEEeCCcceEeecCCCCCeEEEEeEecCCCCC-EEEEEECCEECcCCCCccEEEECC----EEEEcCCCCcccCEEEE
Confidence 4666666666665 578999999999999988 89999999998654433332 333 5666665 889999999
Q ss_pred EEEECCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEEe-cCCCCeEEEEECCEEcCCCCe-------
Q psy16863 625 CVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKVV-GFPTPTLQWFKDNEELKPGDV------- 696 (1075)
Q Consensus 625 C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v~-g~p~p~v~W~k~g~~l~~~~~------- 696 (1075)
|.|.|..|........+.+...+.+... ......+.+|+.+.|.|... +.|.+.++|++++.++....+
T Consensus 80 C~A~N~~G~~~s~~~~l~v~~~~~~~~~---~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~ 156 (384)
T 3kld_A 80 CIATNSFGTIVSREAKLQFAYLENFKTR---TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQET 156 (384)
T ss_dssp EEEEETTEEEECCCEEEEEEEECCCSCC---CCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTT
T ss_pred EEEEcCcccEEecceEEEEecccccccC---CCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCC
Confidence 9999999986554556666544322111 01122466789999999764 456789999999988754332
Q ss_pred --EEEe--ecCCCceEEEEEEecCceEEEE---EEEEEEeccccCchhhhhhhccCCCCCeEE-eccceeeeecCCeEEE
Q psy16863 697 --YQLT--GTSSLGSYCCVAKNVMGKAESS---TQLTIEDIRNHLSEEDKLLLLTNNKAPKFI-EGLKSCQATVNEEFKF 768 (1075)
Q Consensus 697 --~~~~--~~~d~G~Y~C~a~N~~g~~~~~---~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~g~~~~l 768 (1075)
+.+. ..+|+|.|+|.|.|..|..... ..+.+..... ....+|.+. ..+....+..|+++.|
T Consensus 157 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~-----------~~~~~p~~~~~~~~~~~~~~G~~v~l 225 (384)
T 3kld_A 157 GNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGV-----------MGEYEPKIEVQFPETVPAEKGTTVKL 225 (384)
T ss_dssp CCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEE-----------CCCEEEEEEEECCSEEEEETTSCEEE
T ss_pred CcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCc-----------ccccCCceeecCCCceEecCCCcEEE
Confidence 3333 3479999999999998865432 2233321000 001233333 3345677889999999
Q ss_pred EEEEecCCCCeEEEEEC-CEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEecCCCCC
Q psy16863 769 TVQVSISPEPKVSWFRD-DQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVPKHYKK 847 (1075)
Q Consensus 769 ~C~v~g~p~p~v~W~k~-g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~ 847 (1075)
.|.+.|.|.|.+.|+|+ +.++....+. . . ....|.|.+++.+|+|.|+|.|.|..|....++.|.|..+|
T Consensus 226 ~C~~~g~P~p~i~W~k~~~~~~~~~~~~--~-~--~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P---- 296 (384)
T 3kld_A 226 ECFALGNPVPTILWRRADGKPIARKARR--H-K--SNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQP---- 296 (384)
T ss_dssp EEEEEEESCCEEEEEETTCCCCCTTCEE--C-T--TSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEE----
T ss_pred EEEEeecCCCcEEEEeCCCcccccccee--c-C--CCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCC----
Confidence 99999999999999995 5555433211 1 1 12379999999999999999999999999999999998754
Q ss_pred Ceeeeecce-eecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCee-----EEEECCCCceeeEEEEEEEEeCCeeEEE
Q psy16863 848 PKFLEELKA-VLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDIH-----KIISGEDGTCCLGIYTCEAHNCMGTTSS 921 (1075)
Q Consensus 848 p~~~~~~~~-~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~~-----~i~~~~~~~~d~G~Y~C~a~N~~G~~~~ 921 (1075)
.+...+.. .+.+|+.+.|.|.+.|.|.|.|+|+|||.+|..+.+. .|.+......|+|.|+|.|.|.+|.+.+
T Consensus 297 -~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~ 375 (384)
T 3kld_A 297 -NWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFS 375 (384)
T ss_dssp -EEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred -ccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEeCCEEEEeecChhhCEEEEEEEEeCCceEEe
Confidence 44444433 3778999999999999999999999999999765543 3556667778999999999999999999
Q ss_pred EEEEEEe
Q psy16863 922 SAALLGF 928 (1075)
Q Consensus 922 ~~~l~v~ 928 (1075)
++.|.|+
T Consensus 376 ~a~L~V~ 382 (384)
T 3kld_A 376 SAELSVI 382 (384)
T ss_dssp EEEEEEC
T ss_pred ceEEEEe
Confidence 9999885
No 21
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=7.2e-41 Score=381.60 Aligned_cols=377 Identities=12% Similarity=0.146 Sum_probs=234.8
Q ss_pred CCCCEEEEEEEEeCCeeEEEEEEEEEec-------------CCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEE
Q psy16863 317 RDDGGRYSVTASNESGYSTAKFELSVES-------------QVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHW 383 (1075)
Q Consensus 317 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-------------~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W 383 (1075)
..|.|.|+|...+..+..++. .+++.+ ..+..+.++..+.++.|.+|+++.|.|.+.+.|.+.|.|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~c~~~p~~~~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W 82 (423)
T 3qs7_E 4 NQDLPVIKCVLINHKNNDSSV-GKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLW 82 (423)
T ss_dssp -----------------------------------------------------CEEEECSSCCEEEEEECSCCSSCEEEE
T ss_pred cCCCCeeEEEEEeccCCCccc-cccccchhhhCCHHHcCCccCCCCCcceeccccEEEecCCcEEEEEEEEcCCCCeEEE
Confidence 368899999998854432111 111111 011223344445588999999999999999999999999
Q ss_pred EECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCe
Q psy16863 384 YRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGT 463 (1075)
Q Consensus 384 ~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~ 463 (1075)
+|++..+.....+.. .......|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|. +.......+..|+.
T Consensus 83 ~~~~~~l~~~~~~~~-~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~-----~~~~~p~~~~~~~~ 156 (423)
T 3qs7_E 83 VFKHSSLNCQPHFDL-QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLL-----YTLRRPYFRKMENQ 156 (423)
T ss_dssp EETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC----------CEEEEEEEECSSS
T ss_pred EECCCccCccceecc-ccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCcc-----ccccCCcEeccCCc
Confidence 999988765433211 122345699999999999999999999999888888888875442 22111223556888
Q ss_pred EEEEEEEECCCCCeEEEEeCCEeccCCCE---E-EEEeC-CCCCCCcEEEEEEEEecceeeEEE-EEEEEeccccccCCC
Q psy16863 464 VSLECKVMGIPTPQLIWYKDNKKIKAGDI---F-ALTAN-PKDPSSLGTYTCEAVNCMGAAFST-SRVIARGQQSFLDND 537 (1075)
Q Consensus 464 v~l~C~~~g~p~~~v~W~~~g~~l~~~~~---~-~l~i~-~~~~~d~G~Y~C~a~n~~g~~~~~-~~v~v~~~~~~~~~~ 537 (1075)
+.|.|.+.|.|.|.|+|+|++..+..... . ..... .....|+|.|+|.|.|..|..... +.|.|..
T Consensus 157 ~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~-------- 228 (423)
T 3qs7_E 157 DALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQ-------- 228 (423)
T ss_dssp SCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSS--------
T ss_pred eEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEcCCCCcceeeEEEEEec--------
Confidence 89999999999999999999886532110 0 11111 115688999999999999987552 4444431
Q ss_pred CCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEec-CCCCceEEEEeCCeEEecCCcEEEE-EcC----CceEEEE
Q psy16863 538 DVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLV-PPWPRSIYWYNKEGVVEASDKYHIM-ADG----LGGYSIE 611 (1075)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~-~p~p~~v~W~~~~~~i~~~~~~~~~-~~~----~~~~~L~ 611 (1075)
+|.+ .+.+..+.+|+.+.|.|.+.+ .|.| .|.|++++..+.....+... ..+ .....|.
T Consensus 229 ------------~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p-~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~ 293 (423)
T 3qs7_E 229 ------------TPQT--TLPQLFLKVGEPLWIRCKAVHVNHGF-GLTWELENKALEEGNYFEMSTYSTNRTMIRILFAF 293 (423)
T ss_dssp ------------CCCS--STTEEEEETTSCEEEEEEEEESSSCC-CEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEE
T ss_pred ------------CCcc--CCCceEEeCCCeEEEEEEEEcCCCCc-EEEEEECCEEccccceeecccccCCceeEEEEEEE
Confidence 1111 233677899999999999998 5545 89999999887654322111 101 1123799
Q ss_pred EeeeeecCCceEEEEEECCCCceeeeeEEEEEeCCCCcCCCceeec-cceeeecCCeEEEEEEEecCCCCeEEEEECCEE
Q psy16863 612 INYLEAVDDGEWKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVES-LKAVMTDDGLVSFECKVVGFPTPTLQWFKDNEE 690 (1075)
Q Consensus 612 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~-~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~ 690 (1075)
|.+++.+|+|.|+|.|.|. ......|.|..++.+.. ... ....+.+|+.+.|.|.+.|.|.|.++|+|+|..
T Consensus 294 I~~v~~~D~G~Y~C~A~N~----~~~~~~L~V~~~p~i~~---~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~ 366 (423)
T 3qs7_E 294 VSSVARNDTGYYTCSSSKH----PSQSALVTIVEKGFINA---TNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKS 366 (423)
T ss_dssp ESSCCTTTCEEEEEEETTE----EEEEEEEEEESSCEEEE---C---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEE
T ss_pred EeecCHHHCEEEEEEEecC----CCceEEEEEEeCCcceE---cCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEE
Confidence 9999999999999999998 23445677766532211 011 112356789999999999999999999999999
Q ss_pred cCCCC-----eEEE----eecCCCceEEEEEEecCceEEEEEEEEEEec
Q psy16863 691 LKPGD-----VYQL----TGTSSLGSYCCVAKNVMGKAESSTQLTIEDI 730 (1075)
Q Consensus 691 l~~~~-----~~~~----~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 730 (1075)
|..+. .+.+ ...+|+|.|+|.|.|..|.+..++.|.|.+.
T Consensus 367 l~~~~~~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~ 415 (423)
T 3qs7_E 367 FPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSG 415 (423)
T ss_dssp EECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC----
T ss_pred CCCccccccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecC
Confidence 96543 3333 2347999999999999999999999999864
No 22
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=1.1e-40 Score=378.01 Aligned_cols=348 Identities=22% Similarity=0.406 Sum_probs=255.6
Q ss_pred CeeeeecceEE----ecCCeEEEEEEEECCCCCeEEEEeCCEeccCCCEE-------EEEeCC-CCCCCcEEEEEEEEec
Q psy16863 448 PFFTKELEAIL----TEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGDIF-------ALTANP-KDPSSLGTYTCEAVNC 515 (1075)
Q Consensus 448 p~~~~~~~~~~----~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~~~-------~l~i~~-~~~~d~G~Y~C~a~n~ 515 (1075)
|.|..++...+ .+|+.+.|.|.+.|.|.|.|+|+|||.++..+... .|.|.. ...+|+|.|+|.|.|.
T Consensus 6 P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g~l~i~~~~~~~D~G~Y~C~A~N~ 85 (384)
T 3kld_A 6 PVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIATNS 85 (384)
T ss_dssp EEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC----CEEEETTEEEEESCCHHHHCEEEEEEEEET
T ss_pred CEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEECCEEEEcCCCCcccCEEEEEEEEcC
Confidence 44554444432 47899999999999999999999999998654221 244433 3678999999999999
Q ss_pred ceeeEE-EEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEec
Q psy16863 516 MGAAFS-TSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEA 594 (1075)
Q Consensus 516 ~g~~~~-~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~ 594 (1075)
.|...+ .+.+.+... ++..........+.+|+.+.|.|.......+..+.|++++..+..
T Consensus 86 ~G~~~s~~~~l~v~~~-------------------~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~ 146 (384)
T 3kld_A 86 FGTIVSREAKLQFAYL-------------------ENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQ 146 (384)
T ss_dssp TEEEECCCEEEEEEEE-------------------CCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCC
T ss_pred cccEEecceEEEEecc-------------------cccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEe
Confidence 997543 345555311 111112234567889999999997643222348999999988765
Q ss_pred CCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceeeee--EEEEEeCC--CCcCCCceeec-c-ceeeecCCeE
Q psy16863 595 SDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSA--AYVHVLMP--KNYRKPRFVES-L-KAVMTDDGLV 668 (1075)
Q Consensus 595 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~--~~l~v~~p--~~~~~p~~~~~-~-~~~~~~g~~~ 668 (1075)
..+..+.... ..|.|.+++.+|+|.|+|.|.|..|...... ..+.+... .....|.+... . ...+.+|+.+
T Consensus 147 ~~~~~~~~~~---~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v 223 (384)
T 3kld_A 147 DNRRFVSQET---GNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTV 223 (384)
T ss_dssp SSSEEECTTT---CCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCE
T ss_pred eccEEEEcCC---CcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcE
Confidence 4443332221 2699999999999999999999987653211 11222100 00011222211 1 2235678999
Q ss_pred EEEEEEecCCCCeEEEEEC-CEEcCC-------CCeEEEe--ecCCCceEEEEEEecCceEEEEEEEEEEeccccCchhh
Q psy16863 669 SFECKVVGFPTPTLQWFKD-NEELKP-------GDVYQLT--GTSSLGSYCCVAKNVMGKAESSTQLTIEDIRNHLSEED 738 (1075)
Q Consensus 669 ~l~C~v~g~p~p~v~W~k~-g~~l~~-------~~~~~~~--~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~ 738 (1075)
.|.|.+.|.|.|.+.|+|+ +..+.. +..+.+. ..+|+|.|+|.|.|..|....++.|.|..
T Consensus 224 ~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~--------- 294 (384)
T 3kld_A 224 KLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYA--------- 294 (384)
T ss_dssp EEEEEEEEESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE---------
T ss_pred EEEEEEeecCCCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEec---------
Confidence 9999999999999999995 444432 2234444 34799999999999999999999999974
Q ss_pred hhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCe
Q psy16863 739 KLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQA 818 (1075)
Q Consensus 739 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G 818 (1075)
+|.|...+.+..+..|+.+.|.|.+.|.|.|.|+|+|||.++..+.++.+. .+ .|.|.+++.+|+|
T Consensus 295 ---------~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~---~~--~L~i~~v~~~D~G 360 (384)
T 3kld_A 295 ---------QPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIE---QG--TLNITIVNLSDAG 360 (384)
T ss_dssp ---------EEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEE---TT--EEEESSCCGGGCE
T ss_pred ---------CCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEe---CC--EEEEeecChhhCE
Confidence 788888888889999999999999999999999999999999888887653 23 7999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEE
Q psy16863 819 EWKCIATNDFGQSITSCFLKLN 840 (1075)
Q Consensus 819 ~Y~C~A~N~~G~~~~s~~l~V~ 840 (1075)
.|+|.|.|.+|.+.+++.|.|.
T Consensus 361 ~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 361 MYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp EEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEEeCCceEEeceEEEEe
Confidence 9999999999999999999885
No 23
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=6.7e-39 Score=367.40 Aligned_cols=353 Identities=23% Similarity=0.370 Sum_probs=268.7
Q ss_pred CCCCeeeeeccceEeecCCeEEEEEEEecC-CCCceEEEEeCCeEEecC--CcEEEEEcCCceEEEEEeee-----eecC
Q psy16863 548 GPAPIFIKEVENVKAKIGTSAILECQVLVP-PWPRSIYWYNKEGVVEAS--DKYHIMADGLGGYSIEINYL-----EAVD 619 (1075)
Q Consensus 548 ~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~-p~p~~v~W~~~~~~i~~~--~~~~~~~~~~~~~~L~i~~~-----~~~d 619 (1075)
.....+...|.+..+.+|+.++|.|.+.+. |.+ .+.|+|++..+... .+.....++ .|.|.++ +.+|
T Consensus 19 ~~~~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~-~v~W~k~g~~~~~~~~~~~~~~~~~----~l~i~~~~~~~~~~~D 93 (403)
T 3laf_A 19 RRSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVP-VIKWKKDGLILALGMDDRKQQLPNG----SLLIQNILHSRHHKPD 93 (403)
T ss_dssp CCSSEEEECCCCEEECTTCCEEECCEEECTTCCC-EEEEEETTEECCTTSCTTEEECTTS----CEEECSCCCBTTBCSS
T ss_pred ceeEEEEeCCCceEEecCCcEEEEEEcCCCCCCc-eEEEEECCEECccCCcccEEEecCC----cEEEeeeeccCCCCCc
Confidence 346677888999999999999999999874 544 89999999988643 344443333 5677776 7789
Q ss_pred CceEEEEEECCCC-ceeeeeEEEEEeCCCCcCCCceeecc-ceeeecCCeEEEEEEEecCCCCeEEEEECCEEcCC---C
Q psy16863 620 DGEWKCVATSSSG-VKQFSAAYVHVLMPKNYRKPRFVESL-KAVMTDDGLVSFECKVVGFPTPTLQWFKDNEELKP---G 694 (1075)
Q Consensus 620 ~G~Y~C~a~n~~g-~~~~~~~~l~v~~p~~~~~p~~~~~~-~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~l~~---~ 694 (1075)
+|.|+|.|.|..+ ........+.|..| |.+.... ...+.+|+.+.|.|.+.|.|.+.++|+|++..+.. .
T Consensus 94 ~G~Y~C~~~~~~~~~~~s~~~~l~v~~p-----~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~ 168 (403)
T 3laf_A 94 EGLYQCEASLGDSGSIISRTAKVMVAGP-----LRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGD 168 (403)
T ss_dssp CEEEEEEEECGGGCEEECCCEEEEECCC-----CEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTC
T ss_pred ceEEEEEEEeCCCccEEEEEEEEEecCC-----CccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCc
Confidence 9999999997643 33233445555554 3333322 23467899999999999999999999999987742 1
Q ss_pred --------CeEEEe--ecCCCceEEEEEEecCceEE-EEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecC
Q psy16863 695 --------DVYQLT--GTSSLGSYCCVAKNVMGKAE-SSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVN 763 (1075)
Q Consensus 695 --------~~~~~~--~~~d~G~Y~C~a~N~~g~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 763 (1075)
..+.+. ..+|+|.|+|.|.|..|... ..+.+.|...+.. ..++.+...+....+..|
T Consensus 169 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~------------~~~~~~~~~~~~~~~~~g 236 (403)
T 3laf_A 169 SRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGL------------HRQLYFLQRPSNVIAIEG 236 (403)
T ss_dssp CSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCC------------CEEEEEEECCCCEEEETT
T ss_pred eEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCc------------ccCceEecCCCceEecCC
Confidence 233333 34689999999999888644 3566777642110 012345566677788999
Q ss_pred CeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEecC
Q psy16863 764 EEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 764 ~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~ 843 (1075)
+.+.|.|.+.|.|.|.++|+|+|..+.......... .. ..|.|.+++.+|+|.|+|.|.|..|....++.|.|..+|
T Consensus 237 ~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~-~~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 313 (403)
T 3laf_A 237 KDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLL-GG--SNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPP 313 (403)
T ss_dssp SCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEE-TT--TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEE
T ss_pred CcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEEC-Cc--cEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCC
Confidence 999999999999999999999999987554333222 22 379999999999999999999999999999999998764
Q ss_pred CCCCCeeeeecce-eecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCee------EEEECCCCceeeEEEEEEEEeCC
Q psy16863 844 HYKKPKFLEELKA-VLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDIH------KIISGEDGTCCLGIYTCEAHNCM 916 (1075)
Q Consensus 844 ~~~~p~~~~~~~~-~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~~------~i~~~~~~~~d~G~Y~C~a~N~~ 916 (1075)
.+...+.. .+.+|+.++|.|.+.|.|.|.|+|+|||..+..+... .|.+......|+|.|+|.|.|.+
T Consensus 314 -----~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 388 (403)
T 3laf_A 314 -----WFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEA 388 (403)
T ss_dssp -----EEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEETT
T ss_pred -----cEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEEcCC
Confidence 33333332 3678999999999999999999999999998765533 35666777889999999999999
Q ss_pred eeEEEEEEEEEecC
Q psy16863 917 GTTSSSAALLGFED 930 (1075)
Q Consensus 917 G~~~~~~~l~v~~~ 930 (1075)
|..++++.|.|.++
T Consensus 389 G~~~~~~~l~V~~P 402 (403)
T 3laf_A 389 GNAQSSAQLIVPKP 402 (403)
T ss_dssp EEEEEEEEEECCCC
T ss_pred ceEEEEEEEEEeCC
Confidence 99999999998765
No 24
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=4.5e-39 Score=368.82 Aligned_cols=347 Identities=23% Similarity=0.445 Sum_probs=270.7
Q ss_pred eeeeecce-EEecCCeEEEEEEEEC-CCCCeEEEEeCCEeccCCC--E------EEEEeCCC-----CCCCcEEEEEEEE
Q psy16863 449 FFTKELEA-ILTEQGTVSLECKVMG-IPTPQLIWYKDNKKIKAGD--I------FALTANPK-----DPSSLGTYTCEAV 513 (1075)
Q Consensus 449 ~~~~~~~~-~~~~g~~v~l~C~~~g-~p~~~v~W~~~g~~l~~~~--~------~~l~i~~~-----~~~d~G~Y~C~a~ 513 (1075)
.+..++.. .+.+|+.+.|.|.+.+ .|.+.|+|+|+|..+.... + ..|.+..+ ..+|+|.|+|.|.
T Consensus 23 ~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~C~~~ 102 (403)
T 3laf_A 23 HFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEAS 102 (403)
T ss_dssp EEEECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEEEEEEEE
T ss_pred EEEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCCcEEEeeeeccCCCCCcceEEEEEEE
Confidence 44444444 5889999999999987 6778999999999986431 1 13555554 6779999999999
Q ss_pred ecceeeE--EEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEeCCeE
Q psy16863 514 NCMGAAF--STSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKEGV 591 (1075)
Q Consensus 514 n~~g~~~--~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~ 591 (1075)
|..+... ....+.|. .++.+...+....+.+|+.++|.|.+.+.|.+ .+.|++++..
T Consensus 103 ~~~~~~~~s~~~~l~v~--------------------~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~-~v~W~~~~~~ 161 (403)
T 3laf_A 103 LGDSGSIISRTAKVMVA--------------------GPLRFLSQTESITAFMGDTVLLKCEVIGDPMP-TIHWQKNQQD 161 (403)
T ss_dssp CGGGCEEECCCEEEEEC--------------------CCCEECSCCCCEEEETTSCEEECCCEECSSCC-EEEEEESSSB
T ss_pred eCCCccEEEEEEEEEec--------------------CCCccccCCCcEEEEcCCeEEEEEEEcccCCC-eEEEEECCEe
Confidence 7654333 23444443 24556666778889999999999999999877 8999999988
Q ss_pred Eec---CCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEEeCCCCcCC-Cceeeccc-eeeecCC
Q psy16863 592 VEA---SDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHVLMPKNYRK-PRFVESLK-AVMTDDG 666 (1075)
Q Consensus 592 i~~---~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~-p~~~~~~~-~~~~~g~ 666 (1075)
+.. ..+.....++ .|.|.+++.+|+|.|+|.|.|..|........+.|..++.... +.+..... ..+.+|+
T Consensus 162 ~~~~~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~ 237 (403)
T 3laf_A 162 LNPIPGDSRVVVLPSG----ALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGK 237 (403)
T ss_dssp CCCCTTCCSEEECTTS----CEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTS
T ss_pred ccccCCceEEEEcCCc----eEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCC
Confidence 743 2233322222 7999999999999999999998887554456677766543322 22333332 3466899
Q ss_pred eEEEEEEEecCCCCeEEEEECCEEcCCCC---------eEEEe--ecCCCceEEEEEEecCceEEEEEEEEEEeccccCc
Q psy16863 667 LVSFECKVVGFPTPTLQWFKDNEELKPGD---------VYQLT--GTSSLGSYCCVAKNVMGKAESSTQLTIEDIRNHLS 735 (1075)
Q Consensus 667 ~~~l~C~v~g~p~p~v~W~k~g~~l~~~~---------~~~~~--~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~ 735 (1075)
.+.|.|.+.|.|.+.++|+|++..+.... .+.+. ..+|.|.|+|.|.|..|....++.|.|..
T Consensus 238 ~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~------ 311 (403)
T 3laf_A 238 DAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLV------ 311 (403)
T ss_dssp CEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE------
T ss_pred cEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEEC------
Confidence 99999999999999999999999886432 23333 34789999999999999999999999973
Q ss_pred hhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCC
Q psy16863 736 EEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVA 815 (1075)
Q Consensus 736 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~ 815 (1075)
+|.+...+.+..+..|+.+.|.|.+.|.|.|.++|+|+|..+..+.++.+.. . ..|.|.+++.+
T Consensus 312 ------------~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~--~--~~L~i~~v~~~ 375 (403)
T 3laf_A 312 ------------PPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVG--G--SNLRILGVVKS 375 (403)
T ss_dssp ------------EEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEET--T--TEEEESSCCGG
T ss_pred ------------CCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEec--C--ccEEEeccccc
Confidence 7788888888889999999999999999999999999999998887776642 2 37999999999
Q ss_pred CCeEEEEEEEeCCceEEEEEEEEEEec
Q psy16863 816 DQAEWKCIATNDFGQSITSCFLKLNVP 842 (1075)
Q Consensus 816 D~G~Y~C~A~N~~G~~~~s~~l~V~~~ 842 (1075)
|+|.|+|.|.|.+|.+..++.|.|..|
T Consensus 376 d~G~Y~C~a~N~~G~~~~~~~l~V~~P 402 (403)
T 3laf_A 376 DEGFYQCVAENEAGNAQSSAQLIVPKP 402 (403)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred cCEEEEEEEEcCCceEEEEEEEEEeCC
Confidence 999999999999999999999988765
No 25
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=2.2e-39 Score=371.64 Aligned_cols=354 Identities=18% Similarity=0.342 Sum_probs=262.3
Q ss_pred CCCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEecCC--cEEEEEcCCceEEEEEe----eeeecCCce
Q psy16863 549 PAPIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEASD--KYHIMADGLGGYSIEIN----YLEAVDDGE 622 (1075)
Q Consensus 549 ~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~~--~~~~~~~~~~~~~L~i~----~~~~~d~G~ 622 (1075)
+|......+.+..+.+|+.++|.|.+.+.|.| .+.|++++..+.... ++.+...+ ..|.|. +++.+|+|.
T Consensus 16 ~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~-~v~W~k~g~~l~~~~~~~~~~~~~~---~~l~i~~~~~~~~~~D~G~ 91 (404)
T 3p3y_A 16 PPTITKQSAKDHIVDPRDNILIECEAKGNPAP-SFHWTRNSRFFNIAKDPRVSMRRRS---GTLVIDFRSGGRPEEYEGE 91 (404)
T ss_dssp CCCEEEECCTTCEECSSSCCCCCEEECCSSCC-EEEEEETTEECCGGGCSSCBCCSSS---CCCBCCCTTTCCTTSSCEE
T ss_pred CCcccccCCccEEEcCCCCEEEEEEecCCCCC-eEEEEECCEEeeeecCCcceEecCC---ceEEEEeccCCCCccCCEE
Confidence 34444455778899999999999999998877 899999998875432 22222111 144443 788999999
Q ss_pred EEEEEECCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEE-ecCCCCeEEEEECCEEc-CCCCeE---
Q psy16863 623 WKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKV-VGFPTPTLQWFKDNEEL-KPGDVY--- 697 (1075)
Q Consensus 623 Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v-~g~p~p~v~W~k~g~~l-~~~~~~--- 697 (1075)
|+|.|.|..|........+.|..++.... .. .....+.+|+.+.|.|.+ .+.|.+.++|++++..+ ..+.++
T Consensus 92 Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~--~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~ 168 (404)
T 3p3y_A 92 YQCFARNKFGTALSNRIRLQVSKSPLWPK--EN-LDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQG 168 (404)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCCCCCC--CC-CCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEEC
T ss_pred EEEEEEcCCCeEeeeeEEEEEeccCcccc--CC-CCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEc
Confidence 99999999988765556677766543211 11 112357789999999999 78899999999987443 233333
Q ss_pred -----EEe--ecCC-CceEEEEEEecCceEEEE---EEEEEEeccccCchhhhhhhccCCCCCeEEecc---ceeeeecC
Q psy16863 698 -----QLT--GTSS-LGSYCCVAKNVMGKAESS---TQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGL---KSCQATVN 763 (1075)
Q Consensus 698 -----~~~--~~~d-~G~Y~C~a~N~~g~~~~~---~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~g 763 (1075)
.+. ...| +|.|+|.|.|..|..... +.+.|...... ...+|.+.... ....+..|
T Consensus 169 ~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~-----------~~~~p~~~~~~~~~~~~~~~~G 237 (404)
T 3p3y_A 169 HNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGV-----------AERTPSFMYPQGTASSQMVLRG 237 (404)
T ss_dssp TTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCC-----------CCCCCCBSSSCSSEEEEEEETT
T ss_pred CCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCc-----------cccCCccccccCCCCCceEecC
Confidence 332 2256 699999999998864432 44555431110 11355555433 34668899
Q ss_pred CeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEecC
Q psy16863 764 EEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 764 ~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~ 843 (1075)
+.+.|.|.+.|.|.|.++|+|+|..+..... .+. .. ...|.|.+++.+|+|.|+|.|.|..|....++.|.|..+|
T Consensus 238 ~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~-~~~-~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 313 (404)
T 3p3y_A 238 MDLLLECIASGVPTPDIAWYKKGGDLPSDKA-KFE-NF--NKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 313 (404)
T ss_dssp SCEEEECCBCCSSCCEEEEEETTBCCCTTTE-EEE-GG--GTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEE
T ss_pred CCEEEEEEECCCCCCcEEEEECCEECCCCcc-ccc-cc--CceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCC
Confidence 9999999999999999999999998876553 221 11 2379999999999999999999999999889999998754
Q ss_pred CCCCCeeeeecc-eeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCC--------eeEEEECCCCceeeEEEEEEEEe
Q psy16863 844 HYKKPKFLEELK-AVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGD--------IHKIISGEDGTCCLGIYTCEAHN 914 (1075)
Q Consensus 844 ~~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~--------~~~i~~~~~~~~d~G~Y~C~a~N 914 (1075)
.+...+. ..+.+|+.++|.|.+.|.|.|.|+|+|||..+..+. ...|.+......|+|.|+|.|.|
T Consensus 314 -----~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 388 (404)
T 3p3y_A 314 -----YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSN 388 (404)
T ss_dssp -----EEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEE
T ss_pred -----eeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEe
Confidence 3443333 347789999999999999999999999999997543 12567777888899999999999
Q ss_pred CCeeEEEEEEEEEec
Q psy16863 915 CMGTTSSSAALLGFE 929 (1075)
Q Consensus 915 ~~G~~~~~~~l~v~~ 929 (1075)
.+|..++++.|.|++
T Consensus 389 ~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 389 EHGYLLANAFVSVLD 403 (404)
T ss_dssp TTEEEEEEEEEEEC-
T ss_pred CCCcEEEEEEEEEEe
Confidence 999999999998864
No 26
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=7.2e-39 Score=366.04 Aligned_cols=360 Identities=17% Similarity=0.250 Sum_probs=263.3
Q ss_pred CCCeeeeeccceEeecCCeEEEEEEEec-CCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEE
Q psy16863 549 PAPIFIKEVENVKAKIGTSAILECQVLV-PPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVA 627 (1075)
Q Consensus 549 ~~~~~~~~~~~~~v~~G~~~~L~C~~~~-~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 627 (1075)
.+|.|...+.+..+.+|+.++|.|.+.+ .|.+ .+.|++++..+....+......+ ..+|.|.+++.+|+|.|+|.|
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~-~v~W~k~g~~~~~~~~~~~~~~~--~~~L~i~~~~~~D~G~Y~C~a 81 (395)
T 1bih_A 5 KYPVLKDQPAEVLFRENNPTVLECIIEGNDQGV-KYSWKKDGKSYNWQEHNAALRKD--EGSLVFLRPQASDEGHYQCFA 81 (395)
T ss_dssp CCCEECCCCSEEEEETTSCEEECCCEESCCSSC-EEEEEESSSBCCTTTTTEEECTT--SCCEEESSCCGGGCEEEEEEE
T ss_pred CCCEeecCCCceEEeCCCEEEEEEEEecCCCCc-eEEEEECCcCcccccceEEEecC--CceEEEecCCCCCCcEEEEEE
Confidence 4678888888999999999999999999 6655 89999999988766532222222 237999999999999999999
Q ss_pred ECCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEE-ecCCCCeEEEEECC---EEc------------
Q psy16863 628 TSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKV-VGFPTPTLQWFKDN---EEL------------ 691 (1075)
Q Consensus 628 ~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v-~g~p~p~v~W~k~g---~~l------------ 691 (1075)
.|..|........+.+...+. |.+. .....+.+|+.+.|.|.+ .+.|.+.++|+|++ .+.
T Consensus 82 ~n~~g~~~s~~~~l~v~~~~~---p~~~-~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 157 (395)
T 1bih_A 82 ETPAGVASSRVISFRKTYLIA---SPAK-THEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITA 157 (395)
T ss_dssp EETTEEEECCCEEEEEEEEEC---CCCE-EEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEE
T ss_pred EeCCCeEEeEEEEEEEEEeec---CCcC-CcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEE
Confidence 999887654444555543221 2221 122345688999999996 78899999999975 111
Q ss_pred CCCCeEEEe--ecCCCc---eEEEEEEecCceEEEEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeE
Q psy16863 692 KPGDVYQLT--GTSSLG---SYCCVAKNVMGKAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEF 766 (1075)
Q Consensus 692 ~~~~~~~~~--~~~d~G---~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 766 (1075)
..+..+.+. ..+|.| .|+|.|.|..|.................. .......+|.+ .+....+..|+.+
T Consensus 158 ~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~--~~~~~~~~~G~~v 230 (395)
T 1bih_A 158 GPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDN-----SGYKGEPVPQY--VSKDMMAKAGDVT 230 (395)
T ss_dssp CTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCS-----SCCCCCCEEEE--ECCSEEEETTSCE
T ss_pred cCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEeccccccc-----ccccCCcCcee--cCCceEEECCCcE
Confidence 112233333 347889 99999999999865543332221100000 00001124444 2456778999999
Q ss_pred EEEEEEecCCCCeEEEEECCEEeecCCcEEEEEe-eCcEEEEEEccccCCCCeEEEEEEEeCCceEEE-EEEEEEEecCC
Q psy16863 767 KFTVQVSISPEPKVSWFRDDQQVVESDNVKILKE-TLGVCHLKIHALEVADQAEWKCIATNDFGQSIT-SCFLKLNVPKH 844 (1075)
Q Consensus 767 ~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~-s~~l~V~~~~~ 844 (1075)
.|.|.+.|.|.|.++|+|+|..+.......+... ......|.|.+++.+|+|.|+|.|.|..|.... ++.|.|..+|
T Consensus 231 ~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P- 309 (395)
T 1bih_A 231 MIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAP- 309 (395)
T ss_dssp EEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEE-
T ss_pred EEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCC-
Confidence 9999999999999999999999876543322211 112237999999999999999999999999766 8899998754
Q ss_pred CCCCeeeeecc--eeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCe----eEEEECCCCceeeEEEEEEEEeCCee
Q psy16863 845 YKKPKFLEELK--AVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDI----HKIISGEDGTCCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 845 ~~~p~~~~~~~--~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~----~~i~~~~~~~~d~G~Y~C~a~N~~G~ 918 (1075)
.+...+. ..+.+|+.++|.|.+.|.|.|.|+|+|||.++..+.. ..|.+......|+|.|+|.|.|.+|.
T Consensus 310 ----~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~ 385 (395)
T 1bih_A 310 ----KYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSGLVIKGVKNGDKGYYGCRATNEHGD 385 (395)
T ss_dssp ----EEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSSSEEEETTEEEESSCCSTTCEEEEEEEEETTEE
T ss_pred ----ccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCCceEEECCEEEEeeCCcccCEEEEEEEEccCCC
Confidence 4443333 3478999999999999999999999999999976521 15667777788999999999999999
Q ss_pred EEEEEEEEE
Q psy16863 919 TSSSAALLG 927 (1075)
Q Consensus 919 ~~~~~~l~v 927 (1075)
.++++.|.|
T Consensus 386 ~~~~~~l~V 394 (395)
T 1bih_A 386 KYFETLVQV 394 (395)
T ss_dssp EEEEEEEEE
T ss_pred ceEEEEEEE
Confidence 999998876
No 27
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=2.2e-38 Score=360.00 Aligned_cols=346 Identities=19% Similarity=0.318 Sum_probs=262.1
Q ss_pred CCeeeeeccceEe---ecCCeEEEEEEEecCCCCceEEEEeCCeEEecC--CcEEEEEcCCceEEEEEeeeee-cCCceE
Q psy16863 550 APIFIKEVENVKA---KIGTSAILECQVLVPPWPRSIYWYNKEGVVEAS--DKYHIMADGLGGYSIEINYLEA-VDDGEW 623 (1075)
Q Consensus 550 ~~~~~~~~~~~~v---~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~--~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y 623 (1075)
+|.|...+.+..+ .+|+.++|.|.+.+.|.| .+.|++++..+... .++.+ .++ .|.|.++.. +|+|.|
T Consensus 4 ~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~-~v~W~k~g~~~~~~~~~~~~~-~~~----~L~i~~~~~~~D~G~Y 77 (382)
T 1cs6_A 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPA-TYRWKMNGTELKMGPDSRYRL-VAG----DLVISNPVKAKDAGSY 77 (382)
T ss_dssp EEEEEECCCCEEEETTCSCCEEEECCEEEEESCC-EEEEEETTEECCCSTTSSEEE-ETT----EEEEESCCHHHHCEEE
T ss_pred CCEEEECCCcEEEecCCCCCcEEEEEEecCCCCC-EEEEEECCEECCcCCCccEEe-eCC----eEEEecccccccCEEE
Confidence 5777777777776 789999999999998877 89999999988654 34443 233 799999987 999999
Q ss_pred EEEEECCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEEe-cCCCCeEEEEECCEEcC--CC------
Q psy16863 624 KCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKVV-GFPTPTLQWFKDNEELK--PG------ 694 (1075)
Q Consensus 624 ~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v~-g~p~p~v~W~k~g~~l~--~~------ 694 (1075)
+|.|.|..|........+.|..++.+... ......+.+|+.+.|.|.+. +.|.+.++|+|++..+. .+
T Consensus 78 ~C~a~n~~g~~~s~~~~l~v~~~~~~~~~---~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~ 154 (382)
T 1cs6_A 78 QCVATNARGTVVSREASLRFGFLQEFSAE---ERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVS 154 (382)
T ss_dssp EEEEEETTEEEECCCEEEEEEEECCCCSS---CCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEEC
T ss_pred EEEEEcCCcEEEecceEEEeecccccccc---CCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEe
Confidence 99999998876544456666654322111 11223467899999999964 56889999999986642 12
Q ss_pred ---CeEEEe--ecCCCceEEEEEEecCceEEEE-----EEEEEEeccccCchhhhhhhccCCCCCeEEec-cceeeeecC
Q psy16863 695 ---DVYQLT--GTSSLGSYCCVAKNVMGKAESS-----TQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEG-LKSCQATVN 763 (1075)
Q Consensus 695 ---~~~~~~--~~~d~G~Y~C~a~N~~g~~~~~-----~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~g 763 (1075)
..+.+. ..+|.|.|+|.|.|..|..... +.|.|... .....+|.+... +....+..|
T Consensus 155 ~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~------------~~~~~~P~~~~~~~~~~~~~~G 222 (382)
T 1cs6_A 155 QTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAE------------DARQYAPSIKAKFPADTYALTG 222 (382)
T ss_dssp TTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESC------------CCCCEEEEEEECCCSEEEEETT
T ss_pred cCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchh------------hcccCCCceeccCCCceEEeCC
Confidence 223333 2378999999999988644332 34444321 001135555543 456778999
Q ss_pred CeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEecC
Q psy16863 764 EEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 764 ~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~ 843 (1075)
+.+.|.|.+.|.|.|.+.|+|++..+.... ......|.|.+++.+|+|.|+|.|.|..|....++.|.|..+|
T Consensus 223 ~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~-------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 295 (382)
T 1cs6_A 223 QMVTLECFAFGNPVPQIKWRKLDGSQTSKW-------LSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQP 295 (382)
T ss_dssp CCEEEECEEEEESCCEEEEEECCSCCSCCC-------SBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEE
T ss_pred CeEEEEEEEccCCCCEEEEEECCcccccEE-------ecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCC
Confidence 999999999999999999999987765311 1123479999999999999999999999999889999998754
Q ss_pred CCCCCeeeeecce-eecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCee-----EEEECCCCceeeEEEEEEEEeCCe
Q psy16863 844 HYKKPKFLEELKA-VLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDIH-----KIISGEDGTCCLGIYTCEAHNCMG 917 (1075)
Q Consensus 844 ~~~~p~~~~~~~~-~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~~-----~i~~~~~~~~d~G~Y~C~a~N~~G 917 (1075)
.+...+.. .+.+|+.++|.|.+.|.|.|.|+|+|||.++..+.+. .|.+......|+|.|+|.|.|.+|
T Consensus 296 -----~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 370 (382)
T 1cs6_A 296 -----DWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHG 370 (382)
T ss_dssp -----EEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEETTEEEESSCCGGGCEEEEEEEEETTE
T ss_pred -----CcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEECCEEEECcCCcccCEEEEEEEEeCCC
Confidence 33333332 3778999999999999999999999999999876543 466777778899999999999999
Q ss_pred eEEEEEEEEEe
Q psy16863 918 TTSSSAALLGF 928 (1075)
Q Consensus 918 ~~~~~~~l~v~ 928 (1075)
..++++.|.|.
T Consensus 371 ~~~~~~~l~V~ 381 (382)
T 1cs6_A 371 TVYASAELTVQ 381 (382)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEEEEEEEEe
Confidence 99999999875
No 28
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=2.1e-38 Score=361.11 Aligned_cols=339 Identities=23% Similarity=0.376 Sum_probs=257.8
Q ss_pred CCeeeeecce--EEecCCeEEEEEEEECCCCCeEEEEe-CCEeccCC-------CEEEEEeCCCCCCC------cEEEEE
Q psy16863 447 APFFTKELEA--ILTEQGTVSLECKVMGIPTPQLIWYK-DNKKIKAG-------DIFALTANPKDPSS------LGTYTC 510 (1075)
Q Consensus 447 ~p~~~~~~~~--~~~~g~~v~l~C~~~g~p~~~v~W~~-~g~~l~~~-------~~~~l~i~~~~~~d------~G~Y~C 510 (1075)
+|.|...+.. .+.+|+.+.|.|.+.|.|.+.|+|+| ||..+... ....|.|..+..+| +|.|+|
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C 82 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYAC 82 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEE
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEEE
Confidence 3456655543 26789999999999999999999999 78877542 12368899998887 999999
Q ss_pred EEEecceeeE-EEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCC--ceEEEEe
Q psy16863 511 EAVNCMGAAF-STSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWP--RSIYWYN 587 (1075)
Q Consensus 511 ~a~n~~g~~~-~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p--~~v~W~~ 587 (1075)
.|.|..|... ....+.+. .+|.+...+....+.+|+.++|.|.+.+.+.+ ..+.|++
T Consensus 83 ~a~n~~g~~~s~~~~v~v~--------------------~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~ 142 (388)
T 2v5m_A 83 LARNQFGSIISRDVHVRAV--------------------VAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHT 142 (388)
T ss_dssp EEEETTEEEECCCEEEEEE--------------------CCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEE
T ss_pred EEEccCCeEEecceEEEEc--------------------cccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEe
Confidence 9999998753 34455554 12334444566789999999999999886531 4899999
Q ss_pred CCeEEec-----CCcEEEEEcCCceEEEEEeeeeecCC-ceEEEEEECCCCceeee---eEEEEEeCCCCcCCCc---ee
Q psy16863 588 KEGVVEA-----SDKYHIMADGLGGYSIEINYLEAVDD-GEWKCVATSSSGVKQFS---AAYVHVLMPKNYRKPR---FV 655 (1075)
Q Consensus 588 ~~~~i~~-----~~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~n~~g~~~~~---~~~l~v~~p~~~~~p~---~~ 655 (1075)
++..+.. ..++.+..++ .|.|.+++.+|+ |.|+|.|.|..+..... ...+.|..|.....|. +.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~----~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~ 218 (388)
T 2v5m_A 143 DEEENYFPGAEYDGKYLVLPSG----ELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALV 218 (388)
T ss_dssp TTCCEECSSSCBTTTEEECTTS----CEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSC
T ss_pred CCCcccccccCCCCcEEEccCC----cEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCcccc
Confidence 9887643 3344444333 799999999999 99999999986543211 1245666553222222 22
Q ss_pred eccceeeecCCeEEEEEEEecCCCCeEEEEECCEE------cCCCC-------eEEEe--ecCCCceEEEEEEecCceEE
Q psy16863 656 ESLKAVMTDDGLVSFECKVVGFPTPTLQWFKDNEE------LKPGD-------VYQLT--GTSSLGSYCCVAKNVMGKAE 720 (1075)
Q Consensus 656 ~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~------l~~~~-------~~~~~--~~~d~G~Y~C~a~N~~g~~~ 720 (1075)
.. ...+..|+.+.|.|.+.|.|.|.++|+|++.. +..+. .+.+. ..+|+|.|+|.|.|..|...
T Consensus 219 ~~-~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 297 (388)
T 2v5m_A 219 QK-PLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGES 297 (388)
T ss_dssp CC-CEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred CC-ceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCcee
Confidence 11 12466789999999999999999999997432 22222 23333 34789999999999999998
Q ss_pred EEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEe
Q psy16863 721 SSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKE 800 (1075)
Q Consensus 721 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~ 800 (1075)
..+.|.|.. +|.+...+....+..|+++.|.|.+.|.|.|.|+|+|+|..+..+.
T Consensus 298 ~~~~l~V~~------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~~------- 352 (388)
T 2v5m_A 298 VETVLTVTA------------------PLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSE------- 352 (388)
T ss_dssp EEEEEEEEE------------------EEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCCS-------
T ss_pred EEEEEEEeC------------------CCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccCC-------
Confidence 889999974 6666666777889999999999999999999999999999986532
Q ss_pred eCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEE
Q psy16863 801 TLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKL 839 (1075)
Q Consensus 801 ~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V 839 (1075)
..|.|.+++.+|+|.|+|.|.|.+|.+..++.|.|
T Consensus 353 ----~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 353 ----SVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp ----SEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ----CEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 27999999999999999999999999998888876
No 29
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=1.5e-38 Score=364.61 Aligned_cols=351 Identities=19% Similarity=0.375 Sum_probs=263.4
Q ss_pred CCCeeeee-c-ceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCC---------CEEEEEeC----CCCCCCcEEEEE
Q psy16863 446 KAPFFTKE-L-EAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAG---------DIFALTAN----PKDPSSLGTYTC 510 (1075)
Q Consensus 446 ~~p~~~~~-~-~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~---------~~~~l~i~----~~~~~d~G~Y~C 510 (1075)
.+|.+... + ...+.+|+.+.|.|.+.|.|.+.|+|+|+|..+... ....|.+. .+..+|+|.|+|
T Consensus 15 ~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~Y~C 94 (404)
T 3p3y_A 15 QPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQC 94 (404)
T ss_dssp CCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEEEEE
T ss_pred CCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEEEEE
Confidence 34455532 3 335889999999999999999999999999987431 11233443 677899999999
Q ss_pred EEEecceeeE-EEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEE-ecCCCCceEEEEeC
Q psy16863 511 EAVNCMGAAF-STSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQV-LVPPWPRSIYWYNK 588 (1075)
Q Consensus 511 ~a~n~~g~~~-~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~-~~~p~p~~v~W~~~ 588 (1075)
.|.|..|... ..+.|.|... |...........+.+|+.++|.|.+ .+.|.+ .+.|+++
T Consensus 95 ~a~n~~g~~~s~~~~l~V~~~-------------------p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~-~v~W~~~ 154 (404)
T 3p3y_A 95 FARNKFGTALSNRIRLQVSKS-------------------PLWPKENLDPVVVQEGAPLTLQCNPPPGLPSP-VIFWMSS 154 (404)
T ss_dssp EEECSSCEEEEEEEEEEECCC-------------------CCCCCCCCCCEEEETTSCEEECCCCCCCSSCC-EEEEECT
T ss_pred EEEcCCCeEeeeeEEEEEecc-------------------CccccCCCCCeEEccCCcEEEEeCCCCCCCCC-eEEEeCC
Confidence 9999998874 4566776521 2222223345778999999999999 677766 8999998
Q ss_pred CeEEe-cCCcEEEEEcCCceEEEEEeeeeecC-CceEEEEEECCCCceeeee--EEEEEeCCCC--cCCCceeecc----
Q psy16863 589 EGVVE-ASDKYHIMADGLGGYSIEINYLEAVD-DGEWKCVATSSSGVKQFSA--AYVHVLMPKN--YRKPRFVESL---- 658 (1075)
Q Consensus 589 ~~~i~-~~~~~~~~~~~~~~~~L~i~~~~~~d-~G~Y~C~a~n~~g~~~~~~--~~l~v~~p~~--~~~p~~~~~~---- 658 (1075)
+.... ...++....++ .|.|.++...| +|.|+|.|.|..|...... ..+.+...+. ...|.+....
T Consensus 155 ~~~~~~~~~~~~~~~~~----~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~ 230 (404)
T 3p3y_A 155 SMEPITQDKRVSQGHNG----DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTAS 230 (404)
T ss_dssp TSCBCCCCSSEEECTTS----CEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEE
T ss_pred CccccCCCCcEEEcCCC----cEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCC
Confidence 75443 34444443333 69999999999 6999999999988643222 2344432211 1223333221
Q ss_pred ceeeecCCeEEEEEEEecCCCCeEEEEECCEEcCCCCe--------EEEe--ecCCCceEEEEEEecCceEEEEEEEEEE
Q psy16863 659 KAVMTDDGLVSFECKVVGFPTPTLQWFKDNEELKPGDV--------YQLT--GTSSLGSYCCVAKNVMGKAESSTQLTIE 728 (1075)
Q Consensus 659 ~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~l~~~~~--------~~~~--~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 728 (1075)
...+.+|+.+.|.|.+.|.|.+.++|+|+|..+..+.. +.+. ..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 231 ~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 310 (404)
T 3p3y_A 231 SQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVK 310 (404)
T ss_dssp EEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 22467899999999999999999999999998865542 3333 3478999999999999999999999997
Q ss_pred eccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEE
Q psy16863 729 DIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLK 808 (1075)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~ 808 (1075)
. +|.|...+.+..+..|+.+.|.|.+.|.|.|.++|+|+|..+..+..........+ .|.
T Consensus 311 ~------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~--~L~ 370 (404)
T 3p3y_A 311 A------------------APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGD--TII 370 (404)
T ss_dssp E------------------EEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETT--EEE
T ss_pred C------------------CCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCC--EEE
Confidence 4 77888888888899999999999999999999999999999976542111112223 799
Q ss_pred EccccCCCCeEEEEEEEeCCceEEEEEEEEEE
Q psy16863 809 IHALEVADQAEWKCIATNDFGQSITSCFLKLN 840 (1075)
Q Consensus 809 I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~ 840 (1075)
|.+++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 371 i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 371 FRDTQISSRAVYQCNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp ESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC
T ss_pred EeecCHHHCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 99999999999999999999999999888875
No 30
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=1.7e-38 Score=361.03 Aligned_cols=348 Identities=22% Similarity=0.389 Sum_probs=264.3
Q ss_pred CCeeeeecceEE----ecCCeEEEEEEEECCCCCeEEEEeCCEeccCC--CEE-----EEEeCCCCC-CCcEEEEEEEEe
Q psy16863 447 APFFTKELEAIL----TEQGTVSLECKVMGIPTPQLIWYKDNKKIKAG--DIF-----ALTANPKDP-SSLGTYTCEAVN 514 (1075)
Q Consensus 447 ~p~~~~~~~~~~----~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~--~~~-----~l~i~~~~~-~d~G~Y~C~a~n 514 (1075)
+|.|...+...+ .+|+.+.|.|.+.|.|.+.|+|+|+|.++..+ .++ .|.|..+.. +|+|.|+|.|.|
T Consensus 4 ~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n 83 (382)
T 1cs6_A 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVATN 83 (382)
T ss_dssp EEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEETTEEEEESCCHHHHCEEEEEEEEE
T ss_pred CCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEeeCCeEEEecccccccCEEEEEEEEc
Confidence 456666655543 58999999999999999999999999998653 222 577777776 999999999999
Q ss_pred cceeeEE-EEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEe-cCCCCceEEEEeCCeEE
Q psy16863 515 CMGAAFS-TSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVL-VPPWPRSIYWYNKEGVV 592 (1075)
Q Consensus 515 ~~g~~~~-~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~-~~p~p~~v~W~~~~~~i 592 (1075)
..|.... .+.+.|...+ ...........+.+|+.++|.|.+. +.|.+ .+.|++++..+
T Consensus 84 ~~g~~~s~~~~l~v~~~~-------------------~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~-~i~W~~~~~~~ 143 (382)
T 1cs6_A 84 ARGTVVSREASLRFGFLQ-------------------EFSAEERDPVKITEGWGVMFTCSPPPHYPAL-SYRWLLNEFPN 143 (382)
T ss_dssp TTEEEECCCEEEEEEEEC-------------------CCCSSCCCCEEEETTSCEEECCCCCSEESCC-EEEEEESSTTC
T ss_pred CCcEEEecceEEEeeccc-------------------cccccCCCceEEecCCcEEEEeCCCCCCCCc-EEEEEECCCcc
Confidence 9987643 4566664211 1111224567789999999999964 44555 89999998764
Q ss_pred e--cCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceeee----eEEEEEeCCC-CcCCCceeecc--ceeee
Q psy16863 593 E--ASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFS----AAYVHVLMPK-NYRKPRFVESL--KAVMT 663 (1075)
Q Consensus 593 ~--~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~----~~~l~v~~p~-~~~~p~~~~~~--~~~~~ 663 (1075)
. ...+..+. .. ...|.|.+++.+|+|.|+|.+.|..|..... ...+.+.... ...+|.+.... ...+.
T Consensus 144 ~~~~~~~~~~~-~~--~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~ 220 (382)
T 1cs6_A 144 FIPADGRRFVS-QT--TGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYAL 220 (382)
T ss_dssp BCCCCSSEEEC-TT--TCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEE
T ss_pred ccccCceEEEe-cC--ceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEe
Confidence 3 22333222 21 2379999999999999999999987543221 2234433211 11134333221 23467
Q ss_pred cCCeEEEEEEEecCCCCeEEEEECCEEcCC-----CCeEEEe--ecCCCceEEEEEEecCceEEEEEEEEEEeccccCch
Q psy16863 664 DDGLVSFECKVVGFPTPTLQWFKDNEELKP-----GDVYQLT--GTSSLGSYCCVAKNVMGKAESSTQLTIEDIRNHLSE 736 (1075)
Q Consensus 664 ~g~~~~l~C~v~g~p~p~v~W~k~g~~l~~-----~~~~~~~--~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~ 736 (1075)
.|+.+.|.|.+.|.|.|.+.|+|++..+.. +..+.+. ..+|.|.|+|.|.|..|.....+.|.|..
T Consensus 221 ~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~------- 293 (382)
T 1cs6_A 221 TGQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHA------- 293 (382)
T ss_dssp TTCCEEEECEEEEESCCEEEEEECCSCCSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE-------
T ss_pred CCCeEEEEEEEccCCCCEEEEEECCcccccEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEec-------
Confidence 899999999999999999999998877642 3345554 34789999999999999998899999874
Q ss_pred hhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCC
Q psy16863 737 EDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVAD 816 (1075)
Q Consensus 737 ~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D 816 (1075)
+|.|...+....+..|+.+.|.|.+.|.|.|.++|+|+|.++..+.++.+. .+ .|.|.+++.+|
T Consensus 294 -----------~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~---~~--~L~i~~v~~~d 357 (382)
T 1cs6_A 294 -----------QPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVS---GG--ELRFSKLVLED 357 (382)
T ss_dssp -----------EEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEE---TT--EEEESSCCGGG
T ss_pred -----------CCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEE---CC--EEEECcCCccc
Confidence 778888888888999999999999999999999999999999888777653 22 79999999999
Q ss_pred CeEEEEEEEeCCceEEEEEEEEEE
Q psy16863 817 QAEWKCIATNDFGQSITSCFLKLN 840 (1075)
Q Consensus 817 ~G~Y~C~A~N~~G~~~~s~~l~V~ 840 (1075)
+|.|+|.|.|.+|....++.|.|.
T Consensus 358 ~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 358 SGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEEEEEeCCCeEEEEEEEEEe
Confidence 999999999999999999998885
No 31
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=2.5e-38 Score=361.50 Aligned_cols=343 Identities=19% Similarity=0.285 Sum_probs=261.4
Q ss_pred CCeeeeecceE-EecCCeEEEEEEEEC-CCCCeEEEEeCCEeccCCC--------EEEEEeCCCCCCCcEEEEEEEEecc
Q psy16863 447 APFFTKELEAI-LTEQGTVSLECKVMG-IPTPQLIWYKDNKKIKAGD--------IFALTANPKDPSSLGTYTCEAVNCM 516 (1075)
Q Consensus 447 ~p~~~~~~~~~-~~~g~~v~l~C~~~g-~p~~~v~W~~~g~~l~~~~--------~~~l~i~~~~~~d~G~Y~C~a~n~~ 516 (1075)
+|.|...+... +.+|+.+.|.|.+.+ .|.+.|+|+|+|..+.... ...|.|..+...|+|.|+|.|.|..
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 85 (395)
T 1bih_A 6 YPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETPA 85 (395)
T ss_dssp CCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEEETT
T ss_pred CCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEEEeCC
Confidence 45666555544 789999999999998 8889999999999886543 2368999999999999999999998
Q ss_pred eeeEE-EEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEE-ecCCCCceEEEEeCCe---E
Q psy16863 517 GAAFS-TSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQV-LVPPWPRSIYWYNKEG---V 591 (1075)
Q Consensus 517 g~~~~-~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~-~~~p~p~~v~W~~~~~---~ 591 (1075)
|.... .+.+.|... +.|.+ .+.+..+.+|+.++|.|.+ .+.|.+ .+.|++++. .
T Consensus 86 g~~~s~~~~l~v~~~------------------~~p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~-~v~W~~~~~~~~~ 144 (395)
T 1bih_A 86 GVASSRVISFRKTYL------------------IASPA--KTHEKTPIEGRPFQLDCVLPNAYPKP-LITWKKRLSGADP 144 (395)
T ss_dssp EEEECCCEEEEEEEE------------------ECCCC--EEEEECCBTTEEEEECCCCCEEESCC-EEEEEEEETTSCG
T ss_pred CeEEeEEEEEEEEEe------------------ecCCc--CCcceeeeeCCcEEEEecCCCCCCCC-eEEEEecCCCcCc
Confidence 87653 245554321 01111 2346678899999999996 777876 899999861 1
Q ss_pred Eec----CCcEEEEEcCCceEEEEEeeeeecCCc---eEEEEEECCCCceeeeeEEEEEeC--CCC-----cCCCceeec
Q psy16863 592 VEA----SDKYHIMADGLGGYSIEINYLEAVDDG---EWKCVATSSSGVKQFSAAYVHVLM--PKN-----YRKPRFVES 657 (1075)
Q Consensus 592 i~~----~~~~~~~~~~~~~~~L~i~~~~~~d~G---~Y~C~a~n~~g~~~~~~~~l~v~~--p~~-----~~~p~~~~~ 657 (1075)
... ..++....++ .|.|.+++.+|+| .|+|.|.|..|..........+.. +.. ...|.+. .
T Consensus 145 ~~~~~~~~~~~~~~~~~----~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~ 219 (395)
T 1bih_A 145 NADVTDFDRRITAGPDG----NLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYV-S 219 (395)
T ss_dssp GGCCCCCCTTEEECTTS----CEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEE-C
T ss_pred ccccccccccEEEcCCC----cEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceec-C
Confidence 111 3344443333 6999999999999 999999999988543322222211 110 0123331 2
Q ss_pred cceeeecCCeEEEEEEEecCCCCeEEEEECCEEcCCCC-------------eEEEe--ecCCCceEEEEEEecCceEEE-
Q psy16863 658 LKAVMTDDGLVSFECKVVGFPTPTLQWFKDNEELKPGD-------------VYQLT--GTSSLGSYCCVAKNVMGKAES- 721 (1075)
Q Consensus 658 ~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~l~~~~-------------~~~~~--~~~d~G~Y~C~a~N~~g~~~~- 721 (1075)
....+.+|+.+.|.|.+.|.|.+.++|+|+|..+.... .+.+. ..+|+|.|+|.|.|..|....
T Consensus 220 ~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 299 (395)
T 1bih_A 220 KDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKH 299 (395)
T ss_dssp CSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEE
T ss_pred CceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEE
Confidence 23357789999999999999999999999999886431 34443 337899999999999999766
Q ss_pred EEEEEEEeccccCchhhhhhhccCCCCCeEEeccce-eeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEe
Q psy16863 722 STQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKS-CQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKE 800 (1075)
Q Consensus 722 ~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~ 800 (1075)
++.|.|.. +|.|...+.. ..+..|+.+.|.|.+.|.|.|.++|+|+|.++..+ ++.+.
T Consensus 300 ~~~l~V~~------------------~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~-- 358 (395)
T 1bih_A 300 SLKLTVVS------------------APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATVT-- 358 (395)
T ss_dssp EEEEEEEE------------------EEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEEE--
T ss_pred EEEEEEEc------------------CCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEEE--
Confidence 88999874 7788877766 77899999999999999999999999999998765 55542
Q ss_pred eCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEE
Q psy16863 801 TLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKL 839 (1075)
Q Consensus 801 ~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V 839 (1075)
.+ .|.|.+++.+|+|.|+|.|.|.+|....++.|.|
T Consensus 359 -~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 359 -DS--GLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp -TT--EEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred -CC--EEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 23 7999999999999999999999999988888876
No 32
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=7.8e-38 Score=356.44 Aligned_cols=346 Identities=22% Similarity=0.345 Sum_probs=254.1
Q ss_pred CCeeeeeccc-eEeecCCeEEEEEEEecCCCCceEEEEe-CCeEEecCCcEEEEEcCCceEEEEEeeeeecC------Cc
Q psy16863 550 APIFIKEVEN-VKAKIGTSAILECQVLVPPWPRSIYWYN-KEGVVEASDKYHIMADGLGGYSIEINYLEAVD------DG 621 (1075)
Q Consensus 550 ~~~~~~~~~~-~~v~~G~~~~L~C~~~~~p~p~~v~W~~-~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d------~G 621 (1075)
+|.|...+.+ ..+.+|+.++|.|.+.|.|.| .|.|++ ++..+....++.....+ + .|.|.+++.+| +|
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p-~v~W~k~~g~~~~~~~~~~~~~~~-~--~L~i~~~~~~d~~~~~d~G 78 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMP-EIIWIRSDGTAVGDVPGLRQISSD-G--KLVFPPFRAEDYRQEVHAQ 78 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESCC-EEEEEETTSCBCCCBTTTBEECST-T--EEEECCCCGGGCCHHHHEE
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCCC-EEEEEcCCCCccccCCCceEEcCC-c--eEEecccChhhccccccCc
Confidence 4556655554 567899999999999999877 899999 66666544443333222 1 79999999987 99
Q ss_pred eEEEEEECCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEEecCCC---CeEEEEECCEEcCC-----
Q psy16863 622 EWKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKVVGFPT---PTLQWFKDNEELKP----- 693 (1075)
Q Consensus 622 ~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v~g~p~---p~v~W~k~g~~l~~----- 693 (1075)
.|+|.|.|..|........+.+..++.+..+ .....+.+|+.+.|.|.+.+.|. +.++|++++..+..
T Consensus 79 ~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~----~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~ 154 (388)
T 2v5m_A 79 VYACLARNQFGSIISRDVHVRAVVAQYYEAD----VNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEY 154 (388)
T ss_dssp EEEEEEEETTEEEECCCEEEEEECCCCCCCB----CCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCB
T ss_pred eEEEEEEccCCeEEecceEEEEccccccccC----ccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCC
Confidence 9999999999876544556666665433221 12235678999999999988653 78999999876532
Q ss_pred --------CCeEEEe--ecCCC-ceEEEEEEecCceEEE-E---EEEEEEeccccCchhhhhhhccCCCCCeEEe-ccce
Q psy16863 694 --------GDVYQLT--GTSSL-GSYCCVAKNVMGKAES-S---TQLTIEDIRNHLSEEDKLLLLTNNKAPKFIE-GLKS 757 (1075)
Q Consensus 694 --------~~~~~~~--~~~d~-G~Y~C~a~N~~g~~~~-~---~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~ 757 (1075)
+..+.+. ..+|. |.|+|.|.|..+.... + ..|.|...... .+|.+.. ....
T Consensus 155 ~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~-------------~~p~~~~~~~~~ 221 (388)
T 2v5m_A 155 DGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISS-------------SAPRTPALVQKP 221 (388)
T ss_dssp TTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSC-------------EEEECCSSCCCC
T ss_pred CCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcC-------------CCCcCccccCCc
Confidence 1233343 23677 9999999998654332 2 24555531100 0122111 1223
Q ss_pred eeeecCCeEEEEEEEecCCCCeEEEEECCEE------eecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceE
Q psy16863 758 CQATVNEEFKFTVQVSISPEPKVSWFRDDQQ------VVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQS 831 (1075)
Q Consensus 758 ~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~------i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~ 831 (1075)
..+.+|+.+.|.|.+.|.|.|.|+|+|++.. +....++.. ..+ .|.|.+++.+|+|.|+|.|.|..|..
T Consensus 222 ~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~---~~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~ 296 (388)
T 2v5m_A 222 LELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ---VSG--TLIIKDAVVEDSGKYLCVVNNSVGGE 296 (388)
T ss_dssp EEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEE---ETT--EEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred eEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceec---ccC--EEEECcCCHHHCeEEEEEEecCCCce
Confidence 4578899999999999999999999998532 223334332 122 79999999999999999999999999
Q ss_pred EEEEEEEEEecCCCCCCeeeeec-ceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCeeEEEECCCCceeeEEEEE
Q psy16863 832 ITSCFLKLNVPKHYKKPKFLEEL-KAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDIHKIISGEDGTCCLGIYTC 910 (1075)
Q Consensus 832 ~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~~~i~~~~~~~~d~G~Y~C 910 (1075)
..++.|.|..|+. +...+ ...+.+|+.++|.|.+.|.|.|.|+|+|||.+|..+. ..|.+......|+|.|+|
T Consensus 297 ~~~~~l~V~~~p~-----~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~~-~~L~i~~v~~~d~G~Y~C 370 (388)
T 2v5m_A 297 SVETVLTVTAPLS-----AKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSE-SVLRIESVKKEDKGMYQC 370 (388)
T ss_dssp EEEEEEEEEEEEE-----EEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCCS-SEEEESSCCGGGCEEEEE
T ss_pred eEEEEEEEeCCCc-----cccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccCC-CEEEEecCChhhCEEEEE
Confidence 8899999987643 22222 2347799999999999999999999999999997654 467778888899999999
Q ss_pred EEEeCCeeEEEEEEEEE
Q psy16863 911 EAHNCMGTTSSSAALLG 927 (1075)
Q Consensus 911 ~a~N~~G~~~~~~~l~v 927 (1075)
.|.|.+|++++++.|.|
T Consensus 371 ~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 371 FVRNDRESAEASAELKL 387 (388)
T ss_dssp EEECSSCEEEEEEEEEE
T ss_pred EEEcCCCcEEEEEEEEe
Confidence 99999999999998876
No 33
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=1.6e-35 Score=343.26 Aligned_cols=350 Identities=16% Similarity=0.258 Sum_probs=241.0
Q ss_pred eeeeccceEeecCCeEEEEEEEecCCCC---ceEEEEeCC--eEEe------------cCCcEEEEEcCCceEEEEEeee
Q psy16863 553 FIKEVENVKAKIGTSAILECQVLVPPWP---RSIYWYNKE--GVVE------------ASDKYHIMADGLGGYSIEINYL 615 (1075)
Q Consensus 553 ~~~~~~~~~v~~G~~~~L~C~~~~~p~p---~~v~W~~~~--~~i~------------~~~~~~~~~~~~~~~~L~i~~~ 615 (1075)
+...+..+.+.+|+.++|.|.+.+.+.+ ..+.|++++ ..+. ...++.+..++ +...|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v 82 (438)
T 1qgc_4 4 LTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSR-TDFTLTIDPV 82 (438)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEET-TEEEEEESSC
T ss_pred eEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccC-CcEEEEeCCC
Confidence 3445677889999999999999887753 479999963 2210 13466555433 4568999999
Q ss_pred eecCCceEEEEEECCCCceeeeeEEEEEeCCCCcCCCceee-ccceeeecCCeEEEEEEEec-CCCC-eEEEEECCEEcC
Q psy16863 616 EAVDDGEWKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVE-SLKAVMTDDGLVSFECKVVG-FPTP-TLQWFKDNEELK 692 (1075)
Q Consensus 616 ~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~-~~~~~~~~g~~~~l~C~v~g-~p~p-~v~W~k~g~~l~ 692 (1075)
+.+|+|.|+|.|.|..+........+.|..+. .+|.+.. .......+|+.+.|.|.+.| .|.+ .++|+|+|..+.
T Consensus 83 ~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~--~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~ 160 (438)
T 1qgc_4 83 EADDVATYYCQQSNEVPLTFGAGTKLDLKRAD--AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 160 (438)
T ss_dssp CGGGCEEEEEEECSSTTCCBCCCEEEEECCCC--BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred cCcCCeeEEEEEecCCCccccCceeEEecCCC--CCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcC
Confidence 99999999999999887533333456664322 2354433 12222345789999999987 6777 899999999886
Q ss_pred CC------------Ce------EEEe--ecCCCceEEEEEEecCceEEEEEEEEEEeccccCchhhhhhhccCCCCCeEE
Q psy16863 693 PG------------DV------YQLT--GTSSLGSYCCVAKNVMGKAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFI 752 (1075)
Q Consensus 693 ~~------------~~------~~~~--~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~ 752 (1075)
.+ .. +.+. ..+|+|.|+|.|.|..|..... +.+... .++.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~--~~~~~~----------------~~~~~~ 222 (438)
T 1qgc_4 161 NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIV--KSFNRN----------------ECEVML 222 (438)
T ss_dssp TTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEE--EEEETT----------------C-CCEE
T ss_pred CCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCcee--cccccc----------------cceeEE
Confidence 55 12 2222 2368999999999998875332 233210 123334
Q ss_pred eccceeeeecCCeEEEEEEEecCC--CCeEEEEEC--CEEee-----------------cCCcEEEEEee-CcEEEEEEc
Q psy16863 753 EGLKSCQATVNEEFKFTVQVSISP--EPKVSWFRD--DQQVV-----------------ESDNVKILKET-LGVCHLKIH 810 (1075)
Q Consensus 753 ~~~~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~--g~~i~-----------------~~~~~~~~~~~-~~~~~L~I~ 810 (1075)
..+....+.+|+.+.|.|.+.|.| .+.++|+|+ |+.+. ...++.+..+. .+...|.|.
T Consensus 223 ~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 302 (438)
T 1qgc_4 223 VESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMS 302 (438)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEEC
Confidence 445567789999999999999998 679999997 54432 13566665432 346789999
Q ss_pred cccCCCCeEEEEEEEeCCc-----eEEEEEEEEEEecCCCCCCeee-eecceeecCCCeEEEEEEEEcc-CCC-eeEEEE
Q psy16863 811 ALEVADQAEWKCIATNDFG-----QSITSCFLKLNVPKHYKKPKFL-EELKAVLSEGGAVNLECKVIGV-PQP-TLKWFK 882 (1075)
Q Consensus 811 ~~~~~D~G~Y~C~A~N~~G-----~~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~~~L~C~v~g~-p~p-~v~W~k 882 (1075)
+++.+|+|.|+|.|.|..| .......|.|...+. .+|.+. ......+.+|+.++|.|.+.|. |.| .|+|+|
T Consensus 303 ~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~-~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~ 381 (438)
T 1qgc_4 303 SLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKT-TPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNS 381 (438)
T ss_dssp SCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCC-BCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGG
T ss_pred CCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCC-CCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEec
Confidence 9999999999999999554 222345666654221 234432 2223335689999999999998 888 999999
Q ss_pred CCEEcCC--------CCee----EEEECCCCceeeEEEEEEEEeCCeeEEEEEEE
Q psy16863 883 DGRELKA--------GDIH----KIISGEDGTCCLGIYTCEAHNCMGTTSSSAAL 925 (1075)
Q Consensus 883 ~g~~l~~--------~~~~----~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 925 (1075)
||.++.. +..+ .|.+......| |.|+|.|.|.+|.......+
T Consensus 382 ~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i 435 (438)
T 1qgc_4 382 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 435 (438)
T ss_dssp GTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEEC
T ss_pred CCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeec
Confidence 9988752 1222 23443344457 99999999999987665544
No 34
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=1.6e-36 Score=341.52 Aligned_cols=315 Identities=14% Similarity=0.152 Sum_probs=235.6
Q ss_pred ceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEecC--------------CcEEEEEc--CCceEEEEEeeeeecCCce
Q psy16863 559 NVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEAS--------------DKYHIMAD--GLGGYSIEINYLEAVDDGE 622 (1075)
Q Consensus 559 ~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~--------------~~~~~~~~--~~~~~~L~i~~~~~~d~G~ 622 (1075)
.+.+.+|+.++|.|.+.+.|.+ .+.|++++..+... .++.+..+ ..+...|.|.+++.+|+|.
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~ 81 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSI-QFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 81 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSC-CEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEE
T ss_pred eEEEeCCCeEEEEEEecCCCce-EEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEE
Confidence 3567899999999999988876 89999998642211 12222110 1124579999999999999
Q ss_pred EEEEEECCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEEecCCCCeEEEEECCEEcC-CCCeEEEe-
Q psy16863 623 WKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKVVGFPTPTLQWFKDNEELK-PGDVYQLT- 700 (1075)
Q Consensus 623 Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~l~-~~~~~~~~- 700 (1075)
|+|.|.|..+. ..+.|... .......+.+|+.+.|.|.+.+.|.|.++|+|+|..+. .+..+.+.
T Consensus 82 Y~C~~~n~~~~-----~~l~V~~~--------~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~L~i~~ 148 (363)
T 1wio_A 82 YICEVEDQKEE-----VQLLVFGL--------TANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQ 148 (363)
T ss_dssp EEEEETTEEEE-----EEEEEEEE--------EESSCSSEESBSCEEEEEECCTTCCCCEEEECSSSCEEEESSEEEECS
T ss_pred EEEEEEECCCc-----EEEEEEeC--------CCCCceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcccccceEEEEee
Confidence 99999987542 23333321 01112246689999999999999999999999876543 23445554
Q ss_pred -ecCCCceEEEEEEecCceEEEEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEec-----
Q psy16863 701 -GTSSLGSYCCVAKNVMGKAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSI----- 774 (1075)
Q Consensus 701 -~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g----- 774 (1075)
..+|+|.|+|.|.|..+.....+.|.|.. +|.. +....+.+|+.+.|.|.+.+
T Consensus 149 v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~------------------~p~~---~~~~~~~~G~~v~l~C~~~~~~~~~ 207 (363)
T 1wio_A 149 LELQDSGTWTCTVLQNQKKVEFKIDIVVLA------------------FQKA---SSIVYKKEGEQVEFSFPLAFTVEKL 207 (363)
T ss_dssp BCGGGCEECEEEEEETTEEEEECCEECEEC------------------CSCS---EEEEEEETBCCEEEECCCCCCCCSS
T ss_pred CChhcCCEEEEEEecCCCeEEEEEEEEEec------------------CCCC---CCceEEecCCEEEEEEEEecccccC
Confidence 34799999999999887777777777763 2221 14566889999999999888
Q ss_pred CCCCeEEEEECCEEeec--------CCcEEEEEe---------eCcEEEEEEccccCCCCeEEEEEEEeC--CceEEEEE
Q psy16863 775 SPEPKVSWFRDDQQVVE--------SDNVKILKE---------TLGVCHLKIHALEVADQAEWKCIATND--FGQSITSC 835 (1075)
Q Consensus 775 ~p~p~v~W~k~g~~i~~--------~~~~~~~~~---------~~~~~~L~I~~~~~~D~G~Y~C~A~N~--~G~~~~s~ 835 (1075)
.|.|.|+|+|+|..+.. +.++.+... ..+...|.|.+++.+|+|.|+|.|.|. .|....++
T Consensus 208 ~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~ 287 (363)
T 1wio_A 208 TGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEV 287 (363)
T ss_dssp CEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEE
T ss_pred CCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEE
Confidence 78899999999998876 455555331 222448999999999999999999999 99988888
Q ss_pred EEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCe--eEEEECCEEcCCCCeeEEEECCCCceeeEEEEEEEE
Q psy16863 836 FLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPT--LKWFKDGRELKAGDIHKIISGEDGTCCLGIYTCEAH 913 (1075)
Q Consensus 836 ~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~--v~W~k~g~~l~~~~~~~i~~~~~~~~d~G~Y~C~a~ 913 (1075)
.|.|... .|+.++|.|.+.|.|.|. |+|+|||..+..+....| ......|+|.|+|.|+
T Consensus 288 ~l~V~~v-----------------~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~~~~l~i--~~v~~~d~G~Y~C~a~ 348 (363)
T 1wio_A 288 NLVVMRA-----------------TQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKA--VWVLNPEAGMWQCLLS 348 (363)
T ss_dssp EEEEEEE-----------------CCCSSSEEEEEESSCCTTCCEEEECSSSSCSEEESSSE--EEESSCCSEEEEEEEC
T ss_pred eEEEEEe-----------------cCCCeeEEEEEccccCCCccEEEEeCCCceeeeeeeee--eeeccccceeEEEEEe
Confidence 8887621 278899999999999998 999999998876555444 3455678999999999
Q ss_pred eCCeeEEEEEEEEEe
Q psy16863 914 NCMGTTSSSAALLGF 928 (1075)
Q Consensus 914 N~~G~~~~~~~l~v~ 928 (1075)
|. |....++.|.|+
T Consensus 349 ~~-~~~~~~~~~~V~ 362 (363)
T 1wio_A 349 DS-GQVLLESNIKVL 362 (363)
T ss_dssp SS-SSCCEEEEEEEC
T ss_pred cC-CeEEEecceEec
Confidence 75 666666777664
No 35
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=3.8e-33 Score=302.47 Aligned_cols=268 Identities=26% Similarity=0.490 Sum_probs=230.7
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.||.|...+.+..+.+|+.++|.|.+.|.|.+.|+|+|+|..+..+.++.+...+....|.|.+++.+|+|.|+|.|.|.
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 83 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNV 83 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEEC
Confidence 58889888899999999999999999999999999999999999888888877777788999999999999999999999
Q ss_pred CCceeeEEEEEeecCCCCCCCeeeeec--ceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCC---------EEEEE
Q psy16863 428 VGRSHCSCELSVLVPKAYKAPFFTKEL--EAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGD---------IFALT 496 (1075)
Q Consensus 428 ~g~~~~s~~l~V~~~~~~~~p~~~~~~--~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~---------~~~l~ 496 (1075)
.|....++.|.|..+|. +.... ...+.+|+.+.|.|.+.|.|.+.+.|++++..+..+. ...|.
T Consensus 84 ~g~~~~~~~l~V~~~p~-----~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~ 158 (284)
T 2rik_A 84 AGKDSCSAQLGVQEPPR-----FIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLE 158 (284)
T ss_dssp TEEEEEEEEEEEECCCE-----EEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEE
T ss_pred CceEEEEEEEEccCCCc-----ccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEE
Confidence 99888888888887653 33322 2347899999999999999999999999999987654 34688
Q ss_pred eCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEec
Q psy16863 497 ANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLV 576 (1075)
Q Consensus 497 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~ 576 (1075)
|..+..+|+|.|+|.|.|..|....++.|.|.. +|.+...+....+.+|+.++|.|.+.+
T Consensus 159 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~--------------------~p~~~~~~~~~~~~~g~~v~l~C~~~g 218 (284)
T 2rik_A 159 MYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE--------------------PPVFRKKPHPVETLKGADVHLECELQG 218 (284)
T ss_dssp ECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC--------------------CCBCCSCCCCEEECTTCCEEEEEECBS
T ss_pred ECCCCcccCEEEEEEEEcCCCceeEEEEEEEec--------------------CCcceeCCCcceecCCCeEEEEEEEEe
Confidence 999999999999999999999998888888873 344455566678899999999999999
Q ss_pred CCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEE
Q psy16863 577 PPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHV 643 (1075)
Q Consensus 577 ~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v 643 (1075)
.|.| .+.|++++..+..+.++.+..++ ....|.|.++..+|+|.|+|.|.|..|.... ...|.|
T Consensus 219 ~p~~-~v~W~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~-~~~l~V 282 (284)
T 2rik_A 219 TPPF-QVSWHKDKRELRSGKKYKIMSEN-FLTSIHILNVDSADIGEYQCKASNDVGSYTC-VGSITL 282 (284)
T ss_dssp SSCC-EEEEEETTEEECBTTTEEEEEET-TEEEEEECSCCGGGCEEEEEEEEETTEEEEE-EEEEEE
T ss_pred cCCC-EEEEEECCEECcCCCCEEEEEcC-CEEEEEEcCCCcccCEEEEEEEEeCCCceeE-EEEEEE
Confidence 9877 89999999999988888877665 3568999999999999999999999998763 334544
No 36
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=7.8e-33 Score=300.00 Aligned_cols=279 Identities=20% Similarity=0.385 Sum_probs=240.5
Q ss_pred CcccceeecceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCCceeccCcEEEEecCCeEEEEEceeccCCC
Q psy16863 134 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFGNRFRAINRDGRTELNIRRVRRDDG 213 (1075)
Q Consensus 134 ~~p~~~~~~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 213 (1075)
.||.|...+.+..+.+|++++|.|.+.+ .|.+.+.|++++..+....++.+...++...|.|.+++.+|+
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~~g----------~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 73 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHVTG----------TAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDA 73 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEEES----------SSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGC
T ss_pred CCCEEEccccceEecCCCcEEEEEEEEc----------CCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccC
Confidence 3677888888999999999998887764 456789999999877777788777677778999999999999
Q ss_pred eEEEEEEEcCceeEEEEEEEeeeccCCCCCccccccc-cceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCc
Q psy16863 214 GRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLH-DIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDH 292 (1075)
Q Consensus 214 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~-~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~ 292 (1075)
|.|+|.|.|..|..+..+.|.|. .+|.+...+. ...+.+|+.+.|.|.+.+ .+.+.+.|++++..
T Consensus 74 G~Y~C~~~n~~g~~~~~~~l~V~----~~p~~~~~~~~~~~v~~g~~~~l~C~~~g----------~p~~~v~W~~~~~~ 139 (284)
T 2rik_A 74 GQYTCYASNVAGKDSCSAQLGVQ----EPPRFIKKLEPSRIVKQDEHTRYECKIGG----------SPEIKVLWYKDETE 139 (284)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE----CCCEEEECCCSEEEEETTCCEEEEEEEES----------SSCCEEEEEETTEE
T ss_pred EEEEEEEEECCceEEEEEEEEcc----CCCcccccCCCceEecCCceEEEEEEEee----------eCCCEEEEEECCEE
Confidence 99999999999999888899887 3455555443 456889999998877653 45667889888776
Q ss_pred cccCCCeEEEeeCCeEEEEEcccCCCCCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEE
Q psy16863 293 PIFGNRFRAINRDGRTELNIRRVRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVE 372 (1075)
Q Consensus 293 ~~~~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~ 372 (1075)
.....++++...+....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.. +|.+...+....+.+|+.+.|.|.
T Consensus 140 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~v~l~C~ 215 (284)
T 2rik_A 140 IQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE----PPVFRKKPHPVETLKGADVHLECE 215 (284)
T ss_dssp CCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC----CCBCCSCCCCEEECTTCCEEEEEE
T ss_pred CcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEec----CCcceeCCCcceecCCCeEEEEEE
Confidence 6667778877778888999999999999999999999999988899999984 788877778888999999999999
Q ss_pred EecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEee
Q psy16863 373 IRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVL 440 (1075)
Q Consensus 373 ~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~ 440 (1075)
+.|.|.+.|+|+|+|..+..+.++.+..++....|.|.+++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 216 ~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 216 LQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp CBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 99999999999999999999888888888888899999999999999999999999999888888775
No 37
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=5.3e-34 Score=330.49 Aligned_cols=349 Identities=18% Similarity=0.290 Sum_probs=245.2
Q ss_pred eeeecCceeeccCCeEEEEEEEecCCC----cEEEEEECC--Eec------------CCCCcEEEEEcCCEEEEEEcccC
Q psy16863 352 FIRRLHDIAVKVGTRARLLVEIRSPTE----IKIHWYRND--RKL------------EENKIYRTQHDGNFYFIDLSSVS 413 (1075)
Q Consensus 352 ~~~~~~~~~v~~G~~v~l~C~~~g~p~----~~v~W~k~g--~~l------------~~~~~~~~~~~g~~~~L~I~~v~ 413 (1075)
+...+..+.+.+|++++|.|.+.+.+. +.|.|||++ ..+ ....++.+..++....|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (438)
T 1qgc_4 4 LTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVE 83 (438)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCC
T ss_pred eEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCc
Confidence 455677888999999999999988775 489999973 322 12357777777777889999999
Q ss_pred CCCceeEEEEEEeCCCce-eeEEEEEeecCCCCCCCeeee-ecceEEecCCeEEEEEEEEC-CCCC-eEEEEeCCEeccC
Q psy16863 414 LFDSGRWTCLAENAVGRS-HCSCELSVLVPKAYKAPFFTK-ELEAILTEQGTVSLECKVMG-IPTP-QLIWYKDNKKIKA 489 (1075)
Q Consensus 414 ~~d~G~Y~C~a~n~~g~~-~~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~v~l~C~~~g-~p~~-~v~W~~~g~~l~~ 489 (1075)
.+|+|.|+|.|.|..|.. ...+.|.|.... .+|.+.. .......+|+.+.|.|.+.| .|.+ .|+|+|||.++..
T Consensus 84 ~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~--~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~ 161 (438)
T 1qgc_4 84 ADDVATYYCQQSNEVPLTFGAGTKLDLKRAD--AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 161 (438)
T ss_dssp GGGCEEEEEEECSSTTCCBCCCEEEEECCCC--BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred CcCCeeEEEEEecCCCccccCceeEEecCCC--CCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCC
Confidence 999999999999987743 334667775432 2344443 22222346889999999987 6777 9999999998865
Q ss_pred CC----------------EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCee
Q psy16863 490 GD----------------IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIF 553 (1075)
Q Consensus 490 ~~----------------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (1075)
+. ...|.|..+..+|+|.|+|.|.|..|...... .+.. ..++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~--~~~~------------------~~~~~~ 221 (438)
T 1qgc_4 162 GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVK--SFNR------------------NECEVM 221 (438)
T ss_dssp TEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEE--EEET------------------TC-CCE
T ss_pred CceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceec--cccc------------------ccceeE
Confidence 51 23678888888999999999999988753322 2221 012223
Q ss_pred eeeccceEeecCCeEEEEEEEecCC--CCceEEEEeC--CeEEe-----------------cCCcEEEEEcC-CceEEEE
Q psy16863 554 IKEVENVKAKIGTSAILECQVLVPP--WPRSIYWYNK--EGVVE-----------------ASDKYHIMADG-LGGYSIE 611 (1075)
Q Consensus 554 ~~~~~~~~v~~G~~~~L~C~~~~~p--~p~~v~W~~~--~~~i~-----------------~~~~~~~~~~~-~~~~~L~ 611 (1075)
...+....+.+|+.++|.|.+.+.| .+ .+.|+++ +..+. ...++.+..++ .+...|.
T Consensus 222 ~~~~~~~~v~~G~~v~L~C~~~g~p~~~~-~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 300 (438)
T 1qgc_4 222 LVESGGGLVKPGGSLKLSCTASGFIFNRC-AMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQ 300 (438)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGGGS-CEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEE
T ss_pred EecCCceEEecCCcEEEEEEEcccccCCc-EEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEE
Confidence 3445677899999999999999987 44 8999986 43332 13566665442 3456899
Q ss_pred EeeeeecCCceEEEEEECCCCc----eeeeeEEEEEeCCCCcCCCceee-ccceeeecCCeEEEEEEEecC-CCC-eEEE
Q psy16863 612 INYLEAVDDGEWKCVATSSSGV----KQFSAAYVHVLMPKNYRKPRFVE-SLKAVMTDDGLVSFECKVVGF-PTP-TLQW 684 (1075)
Q Consensus 612 i~~~~~~d~G~Y~C~a~n~~g~----~~~~~~~l~v~~p~~~~~p~~~~-~~~~~~~~g~~~~l~C~v~g~-p~p-~v~W 684 (1075)
|.+++.+|+|.|+|.|.|..+. .......+.|...+ ..+|.+.. .....+..|+.++|.|.+.|. |.| .++|
T Consensus 301 I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~-~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W 379 (438)
T 1qgc_4 301 MSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAK-TTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTW 379 (438)
T ss_dssp ECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSC-CBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEE
T ss_pred ECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCC-CCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEE
Confidence 9999999999999999995441 11122356665422 12343332 222235578999999999997 888 9999
Q ss_pred EECCEEcCC--------CCeE------EEeec--CCCceEEEEEEecCceEEEEEEE
Q psy16863 685 FKDNEELKP--------GDVY------QLTGT--SSLGSYCCVAKNVMGKAESSTQL 725 (1075)
Q Consensus 685 ~k~g~~l~~--------~~~~------~~~~~--~d~G~Y~C~a~N~~g~~~~~~~l 725 (1075)
+|+|..+.. +..| .+... +| |.|+|.|.|..|.......+
T Consensus 380 ~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i 435 (438)
T 1qgc_4 380 NSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 435 (438)
T ss_dssp GGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEEC
T ss_pred ecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeec
Confidence 999887642 1223 23332 37 99999999999987665443
No 38
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=3e-34 Score=322.91 Aligned_cols=316 Identities=17% Similarity=0.207 Sum_probs=238.0
Q ss_pred eeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCCceec--------------cCcEEEEe---cCCeEEEEEc
Q psy16863 144 DIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIF--------------GNRFRAIN---RDGRTELNIR 206 (1075)
Q Consensus 144 ~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~~~~~--------------~~~~~~~~---~~~~~~L~I~ 206 (1075)
.+.+.+|++++|.|.+.+ .+.+.+.|++++..... ..|+.+.. .++...|.|.
T Consensus 3 ~v~~~~G~~v~L~C~~~~----------~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 72 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQ----------KKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIK 72 (363)
T ss_dssp EEEEETTSCEEECCCCTT----------CSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEEC
T ss_pred eEEEeCCCeEEEEEEecC----------CCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEEC
Confidence 356788999998887653 45688999998864321 23443332 3355689999
Q ss_pred eeccCCCeEEEEEEEcCceeEEEEEEEeeeccCCCCCccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEE
Q psy16863 207 RVRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSF 286 (1075)
Q Consensus 207 ~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w 286 (1075)
+++.+|+|.|+|.|.|..+ .+.|.|.. .+ ......+.+|+.++|.|.+.+ .+.+.+.|
T Consensus 73 ~v~~~D~G~Y~C~~~n~~~----~~~l~V~~-~~-------~~~~~~v~~G~~v~l~C~~~~----------~p~~~v~W 130 (363)
T 1wio_A 73 NLKIEDSDTYICEVEDQKE----EVQLLVFG-LT-------ANSDTHLLQGQSLTLTLESPP----------GSSPSVQC 130 (363)
T ss_dssp SCCGGGCEEEEEEETTEEE----EEEEEEEE-EE-------ESSCSSEESBSCEEEEEECCT----------TCCCCEEE
T ss_pred CCCHHHCEEEEEEEEECCC----cEEEEEEe-CC-------CCCceEEecCCCEEEEEEcCC----------CCCCeEEE
Confidence 9999999999999998754 55666652 11 122346789999999887754 35667889
Q ss_pred ecCCCccccCCCeEEEeeCCeEEEEEcccCCCCCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCe
Q psy16863 287 RAQGDHPIFGNRFRAINRDGRTELNIRRVRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTR 366 (1075)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~ 366 (1075)
+++++.... ....|.|.+++.+|+|.|+|.|.|..+.....+.+.|.. +|.. +....+.+|+.
T Consensus 131 ~~~~~~~~~----------~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~----~p~~---~~~~~~~~G~~ 193 (363)
T 1wio_A 131 RSPRGKNIQ----------GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA----FQKA---SSIVYKKEGEQ 193 (363)
T ss_dssp ECSSSCEEE----------ESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEEC----CSCS---EEEEEEETBCC
T ss_pred EcCCCcccc----------cceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEec----CCCC---CCceEEecCCE
Confidence 887654321 123799999999999999999999887777777777763 2322 14567889999
Q ss_pred EEEEEEEec-----CCCcEEEEEECCEecCC--------CCcEEEEE----------cCCEEEEEEcccCCCCceeEEEE
Q psy16863 367 ARLLVEIRS-----PTEIKIHWYRNDRKLEE--------NKIYRTQH----------DGNFYFIDLSSVSLFDSGRWTCL 423 (1075)
Q Consensus 367 v~l~C~~~g-----~p~~~v~W~k~g~~l~~--------~~~~~~~~----------~g~~~~L~I~~v~~~d~G~Y~C~ 423 (1075)
+.|.|.+.+ .|.+.|+|+|+|..+.. +.++.+.. .+....|.|.++..+|+|.|+|.
T Consensus 194 v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 273 (363)
T 1wio_A 194 VEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLT 273 (363)
T ss_dssp EEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEE
T ss_pred EEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEE
Confidence 999998877 77899999999998876 44554432 22234699999999999999999
Q ss_pred EEeC--CCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCe--EEEEeCCEeccCCCEEEEEeCC
Q psy16863 424 AENA--VGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQ--LIWYKDNKKIKAGDIFALTANP 499 (1075)
Q Consensus 424 a~n~--~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~--v~W~~~g~~l~~~~~~~l~i~~ 499 (1075)
|.|. .|....++.|.|.. ..|+++.|.|.+.|.|+|. ++|+|+|+.+..+ ..|.|..
T Consensus 274 a~n~~~~g~~~~~~~l~V~~-----------------v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~~--~~l~i~~ 334 (363)
T 1wio_A 274 LALEAKTGKLHQEVNLVVMR-----------------ATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVS--KREKAVW 334 (363)
T ss_dssp ECBTTTTCCEEEEEEEEEEE-----------------ECCCSSSEEEEEESSCCTTCCEEEECSSSSCSEE--ESSSEEE
T ss_pred EEEhhhcCeEEEEEeEEEEE-----------------ecCCCeeEEEEEccccCCCccEEEEeCCCceeee--eeeeeee
Confidence 9999 99888777777751 1288899999999999987 9999999988753 3456677
Q ss_pred CCCCCcEEEEEEEEecceeeEEEEEEEEe
Q psy16863 500 KDPSSLGTYTCEAVNCMGAAFSTSRVIAR 528 (1075)
Q Consensus 500 ~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~ 528 (1075)
+..+|+|.|+|.|.|. |....++.+.|.
T Consensus 335 v~~~d~G~Y~C~a~~~-~~~~~~~~~~V~ 362 (363)
T 1wio_A 335 VLNPEAGMWQCLLSDS-GQVLLESNIKVL 362 (363)
T ss_dssp ESSCCSEEEEEEECSS-SSCCEEEEEEEC
T ss_pred eccccceeEEEEEecC-CeEEEecceEec
Confidence 8899999999999964 566667777663
No 39
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=7.1e-32 Score=312.56 Aligned_cols=357 Identities=17% Similarity=0.178 Sum_probs=221.2
Q ss_pred ccceEeecCCeEEEEEEEecCC-CCceEEEEeCC--eEEe-----------------cCCcEEEEEcC-CceEEEEEeee
Q psy16863 557 VENVKAKIGTSAILECQVLVPP-WPRSIYWYNKE--GVVE-----------------ASDKYHIMADG-LGGYSIEINYL 615 (1075)
Q Consensus 557 ~~~~~v~~G~~~~L~C~~~~~p-~p~~v~W~~~~--~~i~-----------------~~~~~~~~~~~-~~~~~L~i~~~ 615 (1075)
+..+.+.+|+.++|.|.+.+.+ .+..+.||+++ ..+. ...++.+..++ .+..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (444)
T 1igt_B 7 SGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRL 86 (444)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCC
Confidence 4556789999999999998764 12379999853 2211 12466665442 34578999999
Q ss_pred eecCCceEEEEEECCCCce--eeeeEEEEEeCCCCcCCCcee-eccceeeecCCeEEEEEEEecC-CCC-eEEEEECCEE
Q psy16863 616 EAVDDGEWKCVATSSSGVK--QFSAAYVHVLMPKNYRKPRFV-ESLKAVMTDDGLVSFECKVVGF-PTP-TLQWFKDNEE 690 (1075)
Q Consensus 616 ~~~d~G~Y~C~a~n~~g~~--~~~~~~l~v~~p~~~~~p~~~-~~~~~~~~~g~~~~l~C~v~g~-p~p-~v~W~k~g~~ 690 (1075)
+.+|+|.|+|.|.|..+.. ......+.|.... ..+|.+. ......+.+|+.+.|.|.+.|. |.| .++|+|++..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 165 (444)
T 1igt_B 87 KSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAK-TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS 165 (444)
T ss_dssp CGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCC-CBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred CHHHCEEEEEEEecCCcccccccCcEEEEecCCC-CCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCC
Confidence 9999999999999986542 1123456665321 1234333 2222234678899999999985 776 9999998875
Q ss_pred cC--------CCCeEEE------eec--CCCceEEEEEEecCceEEEEEEEEEEeccccCchhhhhhhccCCCCCeE-Ee
Q psy16863 691 LK--------PGDVYQL------TGT--SSLGSYCCVAKNVMGKAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKF-IE 753 (1075)
Q Consensus 691 l~--------~~~~~~~------~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~-~~ 753 (1075)
+. .+..|.. ... +| |.|+|.|.|..|.......+.+.+.....-............+|.+ +.
T Consensus 166 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~ 244 (444)
T 1igt_B 166 SGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIF 244 (444)
T ss_dssp TTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEE
T ss_pred CCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEec
Confidence 31 1123322 221 47 9999999999998755554433210000000000000011135654 44
Q ss_pred ccceee-eecCCeEEEEEEEecCC----CCeEEEEECCEEeecCCcEEEEEeeC----cEEEEEEccccCCCCeEEEEEE
Q psy16863 754 GLKSCQ-ATVNEEFKFTVQVSISP----EPKVSWFRDDQQVVESDNVKILKETL----GVCHLKIHALEVADQAEWKCIA 824 (1075)
Q Consensus 754 ~~~~~~-~~~g~~~~l~C~v~g~p----~p~v~W~k~g~~i~~~~~~~~~~~~~----~~~~L~I~~~~~~D~G~Y~C~A 824 (1075)
++.... +..|+.+.|.|.+.|.| .+.|+|+|+|..+............+ ....|.|.+++.+|+|.|+|.|
T Consensus 245 ~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a 324 (444)
T 1igt_B 245 PPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKV 324 (444)
T ss_dssp CCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEE
T ss_pred CCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEE
Confidence 443333 58899999999999974 36999999999886443221111111 2457999999999999999999
Q ss_pred EeCCceEEEEEEEEEEecCCCCCCeeeeecc-eeecCCCeEEEEEEEEcc-CCC-eeEEEECCEEcCCCCe---------
Q psy16863 825 TNDFGQSITSCFLKLNVPKHYKKPKFLEELK-AVLSEGGAVNLECKVIGV-PQP-TLKWFKDGRELKAGDI--------- 892 (1075)
Q Consensus 825 ~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~-p~p-~v~W~k~g~~l~~~~~--------- 892 (1075)
.|..|....+..+.+ ......+|.+..... .....++.++|.|.+.|. |.+ .|+|+|||.++.....
T Consensus 325 ~n~~~~~~~~~~v~~-~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g 403 (444)
T 1igt_B 325 NNKDLPAPIERTISK-PKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDG 403 (444)
T ss_dssp ECTTCSSCEEEEEEC-CCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTS
T ss_pred EcCCCCCceEEEEec-cCCCCCCCEEEEeCCChHHccCCeEEEEEEEEeeeCCCCEEEEEECCEEccccccccceeCCCC
Confidence 999997633333322 011223454432221 112234469999999994 555 8999999998843111
Q ss_pred -eE----EEECCCCceeeEEEEEEEEeCC
Q psy16863 893 -HK----IISGEDGTCCLGIYTCEAHNCM 916 (1075)
Q Consensus 893 -~~----i~~~~~~~~d~G~Y~C~a~N~~ 916 (1075)
+. +.+......|.|.|+|.|.|..
T Consensus 404 ~~~~~s~l~i~~~~~~d~g~YtC~a~n~~ 432 (444)
T 1igt_B 404 SYFMYSKLRVEKKNWVERNSYSCSVVHEG 432 (444)
T ss_dssp CEEEEEEEEEEHHHHHTCCCEEEEEECTT
T ss_pred CEEEEEEEEEChHHhcCCCeEEEEEECCC
Confidence 11 1111111234899999999975
No 40
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=1.2e-31 Score=296.08 Aligned_cols=292 Identities=14% Similarity=0.254 Sum_probs=237.1
Q ss_pred CcccceeecceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCCceeccCcEEEEecCCeEEEEEceeccCCC
Q psy16863 134 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFGNRFRAINRDGRTELNIRRVRRDDG 213 (1075)
Q Consensus 134 ~~p~~~~~~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 213 (1075)
.+|.|..++ +..+.+|++++|.|.+.+. .|.+.+.|+++|..+....++.+. ++...|.|.+++.+|+
T Consensus 6 ~~P~~~~~~-~~~v~~G~~v~l~C~~~~~---------~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~ 73 (317)
T 2y25_A 6 TGPHFVEYL-SWEVTGECNVLLKCKVANI---------KKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDA 73 (317)
T ss_dssp SCCEEEEEE-EEEEETTTEEEEEEEEESC---------CTTCEEEEEETTEEECCSCC-------CCEEEEETTCCSTTC
T ss_pred CCCcEeeee-eEEECCCCeEEEEEEEcCC---------CCCCEEEEEECCeEcCCCCcEEEE--CCeEEEEEccCCcccC
Confidence 357777555 5899999999998887652 155789999998776656666544 4457999999999999
Q ss_pred eEEEEEEEcCceeEEEEEEEeeeccCCCCCccccccccceeeccceeEEEEEecCCCceEEEEec-CCCeeeEEecCCCc
Q psy16863 214 GRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDL-NNTIPFSFRAQGDH 292 (1075)
Q Consensus 214 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~-~~~~~~~w~~~~~~ 292 (1075)
|.|+|.|.|..|.....+.|.|. .+|.+...+....+.+|+.+.|.|...+ ..+.|.+.+ .+.+.+.|++++..
T Consensus 74 G~Y~C~~~n~~g~~~~~~~l~v~----~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~~l~c~~~~~~p~~~i~W~~~~~~ 148 (317)
T 2y25_A 74 GIYEVILKDDRGKDKSRLKLVDE----AFKELMMEVCKKIALSATDLKIQSTAEG-IQLYSFVTYYVEDLKVNWSHNGSA 148 (317)
T ss_dssp SCEEEEEESSSCEEEEEECCSTH----HHHHHHHHHHHHHHTCBCCCEEEECSSE-EEEEEEBSSCCSSCEEEEEESSSB
T ss_pred eEEEEEEECCCCcEEEEEEEEEe----cCccccccCCceecccCCCeEEEeeccc-cEEEEEeccCCCCcEEEEEECCEE
Confidence 99999999999988777666654 3455566667778889999999998754 357898876 46778889888877
Q ss_pred cccCCCeEEEeeCCeEEEEEcccCCCCCEEEEEEEEeCCeeEEEEEEEEEec----------------CCCCCCeeeee-
Q psy16863 293 PIFGNRFRAINRDGRTELNIRRVRRDDGGRYSVTASNESGYSTAKFELSVES----------------QVPDAPAFIRR- 355 (1075)
Q Consensus 293 ~~~~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----------------~~~~~p~~~~~- 355 (1075)
...+.++.+...+....|.|.+++.+|+|.|+|.|.|..|.....+.+.|.. ....+|.+...
T Consensus 149 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 228 (317)
T 2y25_A 149 IRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGL 228 (317)
T ss_dssp CCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBC
T ss_pred CCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccC
Confidence 6667888888888888999999999999999999999999888887777541 12334556554
Q ss_pred cCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEc-CCEEEEEEcccCCCCceeEEEEEEeCCCceeeE
Q psy16863 356 LHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHD-GNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCS 434 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~-g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s 434 (1075)
+....+.+|+.+.|.|.+.|.|.+.|+|+|+|..+..+.++.+... +..+.|.|.+++.+|+|.|+|.|.|..|....+
T Consensus 229 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 308 (317)
T 2y25_A 229 PDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSD 308 (317)
T ss_dssp CSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEE
T ss_pred CccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEE
Confidence 4557899999999999999999999999999999988888887766 778899999999999999999999999999999
Q ss_pred EEEEeecC
Q psy16863 435 CELSVLVP 442 (1075)
Q Consensus 435 ~~l~V~~~ 442 (1075)
+.|.|.+|
T Consensus 309 ~~l~V~~P 316 (317)
T 2y25_A 309 FTVSVFIP 316 (317)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 99998865
No 41
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.8e-31 Score=288.84 Aligned_cols=270 Identities=25% Similarity=0.413 Sum_probs=203.3
Q ss_pred CCCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEecCCcEEEEE-cCCceEEEEEeeeee-cCCceEEEE
Q psy16863 549 PAPIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEASDKYHIMA-DGLGGYSIEINYLEA-VDDGEWKCV 626 (1075)
Q Consensus 549 ~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~~~~~~~~-~~~~~~~L~i~~~~~-~d~G~Y~C~ 626 (1075)
.||.|...+.+..+.+|+.++|.|.+.+.|.| .|.|++++..+.. .++.+.. .......|.|.++.. +|+|.|+|.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~-~i~W~k~g~~i~~-~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~ 82 (304)
T 2yd9_A 5 EPPRFIKEPKDQIGVSGGVASFVCQATGDPKP-RVTWNKKGKKVNS-QRFETIEFDESAGAVLRIQPLRTPRDENVYECV 82 (304)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCC-EEEEC-------C-TTEEEEEETTTTEEEEEECSCCTTTTCSEEEEE
T ss_pred cCCeeeecCCceEecCCCeEEEEEEEEEeCCC-eEEEEECCEECCC-CceEEEEecCCCceEEEEecccccCCCeEEEEE
Confidence 47888888999999999999999999999877 8999999988754 3444433 322347899999998 999999999
Q ss_pred EECCCCceeeeeEEEEEeCCCCc--CCCceeeccc-eeeecCCeEEEEEEEecCCCCeEEEEECCEEcCCC---------
Q psy16863 627 ATSSSGVKQFSAAYVHVLMPKNY--RKPRFVESLK-AVMTDDGLVSFECKVVGFPTPTLQWFKDNEELKPG--------- 694 (1075)
Q Consensus 627 a~n~~g~~~~~~~~l~v~~p~~~--~~p~~~~~~~-~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~l~~~--------- 694 (1075)
|.|..|... ....|.|..++.. ..|.+..... ..+..|+.+.|.|.+.|.|.|.++|+|++..+..+
T Consensus 83 a~n~~g~~~-~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~ 161 (304)
T 2yd9_A 83 AQNSVGEIT-VHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQL 161 (304)
T ss_dssp EECSSCEEC-CEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEEC
T ss_pred EECCCCeEE-EEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeC
Confidence 999998854 4456777654321 1245544433 34667889999999999999999999999887543
Q ss_pred --CeEEEe--ecCCCceEEEEEEecCceEEEE-EEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEE
Q psy16863 695 --DVYQLT--GTSSLGSYCCVAKNVMGKAESS-TQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFT 769 (1075)
Q Consensus 695 --~~~~~~--~~~d~G~Y~C~a~N~~g~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~ 769 (1075)
..+.+. ..+|+|.|+|.|.|..|..... +.|.|... ..+|.|...+....+..|+.+.|.
T Consensus 162 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~---------------~~~P~~~~~~~~~~v~~G~~v~l~ 226 (304)
T 2yd9_A 162 RSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQ---------------NVAPRFSILPMSHEIMPGGNVNIT 226 (304)
T ss_dssp TTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC---------------CEEEEEEECCCCBCCCTTCCEEEE
T ss_pred CCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEee---------------ccCCcEEecCCceEEcCCCeEEEE
Confidence 123343 3378999999999999987654 56666531 147788877777889999999999
Q ss_pred EEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEecC
Q psy16863 770 VQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 770 C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~ 843 (1075)
|.+.|.|.|.|+|+|+|..+....++. .+...|.|.++ +|+|.|+|.|.|.+|....++.|.|..++
T Consensus 227 C~~~g~p~p~v~W~~~~~~l~~~~~~~-----~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 293 (304)
T 2yd9_A 227 CVAVGSPMPYVKWMQGAEDLTPEDDMP-----VGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLP 293 (304)
T ss_dssp EEEEEESCCEEEEEETTEECSCSSSCC-----BSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC-----
T ss_pred EEEeeeCCCEEEEEECCEECCCccccc-----CCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCc
Confidence 999999999999999999997765432 34557888776 69999999999999999999999998654
No 42
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=4e-31 Score=289.47 Aligned_cols=273 Identities=22% Similarity=0.395 Sum_probs=209.4
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEE--EcCCEEEEEEcccCC-CCceeEEEE
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQ--HDGNFYFIDLSSVSL-FDSGRWTCL 423 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~--~~g~~~~L~I~~v~~-~d~G~Y~C~ 423 (1075)
..+|.|...+.+..+.+|++++|.|.+.|.|.+.|+|+|+|..+... ++.+. .++....|.|.++.. +|+|.|+|.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~ 82 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYECV 82 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEEE
Confidence 35899999999999999999999999999999999999999988654 33333 345567899999998 999999999
Q ss_pred EEeCCCceeeEEEEEeecCCCCC--CCeeeeecce-EEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCC---------
Q psy16863 424 AENAVGRSHCSCELSVLVPKAYK--APFFTKELEA-ILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGD--------- 491 (1075)
Q Consensus 424 a~n~~g~~~~s~~l~V~~~~~~~--~p~~~~~~~~-~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~--------- 491 (1075)
|.|..|....++.|.|..++... .|.+...+.. .+.+|+.+.|.|.+.|.|.+.++|+|+|..+....
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~ 162 (304)
T 2yd9_A 83 AQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLR 162 (304)
T ss_dssp EECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECT
T ss_pred EECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCC
Confidence 99999998888999998764321 2455544443 47889999999999999999999999999886431
Q ss_pred EEEEEeCCCCCCCcEEEEEEEEecceeeEEE-EEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEE
Q psy16863 492 IFALTANPKDPSSLGTYTCEAVNCMGAAFST-SRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAIL 570 (1075)
Q Consensus 492 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L 570 (1075)
...|.|..+..+|+|.|+|.|.|..|..... +.+.|... ..+|.+...+....+.+|+.++|
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~-----------------~~~P~~~~~~~~~~v~~G~~v~l 225 (304)
T 2yd9_A 163 SGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQ-----------------NVAPRFSILPMSHEIMPGGNVNI 225 (304)
T ss_dssp TSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC-----------------CEEEEEEECCCCBCCCTTCCEEE
T ss_pred CeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEee-----------------ccCCcEEecCCceEEcCCCeEEE
Confidence 1268999999999999999999999987644 55665411 13466666667778999999999
Q ss_pred EEEEecCCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEEeCC
Q psy16863 571 ECQVLVPPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHVLMP 646 (1075)
Q Consensus 571 ~C~~~~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p 646 (1075)
.|.+.+.|.| .+.|++++..+....++. .+...|.|.++ +|+|.|+|.|.|..|.... ...|.|..+
T Consensus 226 ~C~~~g~p~p-~v~W~~~~~~l~~~~~~~-----~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~-~~~l~V~~~ 292 (304)
T 2yd9_A 226 TCVAVGSPMP-YVKWMQGAEDLTPEDDMP-----VGRNVLELTDV--KDSANYTCVAMSSLGVIEA-VAQITVKSL 292 (304)
T ss_dssp EEEEEEESCC-EEEEEETTEECSCSSSCC-----BSEEEEEECSC--CSCEEEEEEEEETTEEEEE-EEEEC----
T ss_pred EEEEeeeCCC-EEEEEECCEECCCccccc-----CCcEEEEEccc--ccCEEEEEEEEeCCCcEEE-EEEEEEecC
Confidence 9999999988 899999999887655432 23456777766 6999999999999998763 456666554
No 43
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.98 E-value=1.8e-31 Score=309.18 Aligned_cols=360 Identities=14% Similarity=0.123 Sum_probs=232.4
Q ss_pred ccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCC-Cc-c-----------------ccCCCeEEEee--CC
Q psy16863 248 RLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQG-DH-P-----------------IFGNRFRAINR--DG 306 (1075)
Q Consensus 248 ~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~-~~-~-----------------~~~~~~~~~~~--~~ 306 (1075)
.+..+.+.+|+.++|.|.+.+... +...+.|++.+ +. + ....|+.+..+ ++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~--------~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 77 (444)
T 1igt_B 6 ESGGGLVQPGGSLKLSCATSGFTF--------SDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKN 77 (444)
T ss_dssp EECCCEECTTCCEEEEEEEESSCG--------GGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTT
T ss_pred cCCCeEEcCCCCEEEEEEcCCCcc--------CCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCC
Confidence 345567899999999999864310 12234444321 11 0 01357776654 35
Q ss_pred eEEEEEcccCCCCCEEEEEEEEeCCee---EEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecC-CCc-EE
Q psy16863 307 RTELNIRRVRRDDGGRYSVTASNESGY---STAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSP-TEI-KI 381 (1075)
Q Consensus 307 ~~~L~I~~~~~~d~G~Y~C~a~n~~g~---~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~-p~~-~v 381 (1075)
..+|.|.+++.+|+|.|+|.|.|..+. ....+.|.|......+|.+........+.+|+.++|.|.+.|. |.+ .|
T Consensus 78 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v 157 (444)
T 1igt_B 78 TLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTL 157 (444)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEE
T ss_pred eEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEE
Confidence 679999999999999999999997543 2234577776433445666544444456899999999999874 665 99
Q ss_pred EEEECCEecCCCCcEEEEEcCC---EEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecC-------------CCC
Q psy16863 382 HWYRNDRKLEENKIYRTQHDGN---FYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVP-------------KAY 445 (1075)
Q Consensus 382 ~W~k~g~~l~~~~~~~~~~~g~---~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~-------------~~~ 445 (1075)
+|+|+|..+...........+. ...|.|.++..+| |.|+|.|.|..|.......+.+..+ ...
T Consensus 158 ~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (444)
T 1igt_B 158 TWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLL 236 (444)
T ss_dssp EEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCC
T ss_pred EEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccC
Confidence 9999997642110000111122 1358999999899 9999999999998755555543210 111
Q ss_pred CCCee-eeecceE--EecCCeEEEEEEEECCC---C-CeEEEEeCCEeccCCC--------------EEEEEeCCCCCCC
Q psy16863 446 KAPFF-TKELEAI--LTEQGTVSLECKVMGIP---T-PQLIWYKDNKKIKAGD--------------IFALTANPKDPSS 504 (1075)
Q Consensus 446 ~~p~~-~~~~~~~--~~~g~~v~l~C~~~g~p---~-~~v~W~~~g~~l~~~~--------------~~~l~i~~~~~~d 504 (1075)
.+|.+ ..++... +.+|+.+.|.|.+.|.| + +.|+|+|+|..+.... ...|.|..+..+|
T Consensus 237 ~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d 316 (444)
T 1igt_B 237 GGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMS 316 (444)
T ss_dssp CCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHT
T ss_pred CCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhcc
Confidence 23443 3333222 47899999999999874 3 5999999998875321 2368898889999
Q ss_pred cEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeee-eccceEeecCCeEEEEEEEec-CCCCce
Q psy16863 505 LGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIK-EVENVKAKIGTSAILECQVLV-PPWPRS 582 (1075)
Q Consensus 505 ~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~G~~~~L~C~~~~-~p~p~~ 582 (1075)
+|.|+|.|.|..|.......+.+.. .. ..+|.+.. .+....+..| .++|.|.+.+ .|.+..
T Consensus 317 ~G~Y~C~a~n~~~~~~~~~~v~~~~---------------~~-~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~ 379 (444)
T 1igt_B 317 GKEFKCKVNNKDLPAPIERTISKPK---------------GS-VRAPQVYVLPPPEEEMTKK-QVTLTCMVTDFMPEDIY 379 (444)
T ss_dssp TCEEEEEEECTTCSSCEEEEEECCC---------------CC-CBCCEEEEECCCGGGTTSS-EEEEEEEEEEEBSSCCE
T ss_pred CCcEEEEEEcCCCCCceEEEEeccC---------------CC-CCCCEEEEeCCChHHccCC-eEEEEEEEEeeeCCCCE
Confidence 9999999999988764333332210 01 12344332 2222223344 5999999998 555558
Q ss_pred EEEEeCCeEEecCCcEEEEEcCCceE----EEEEeeeeecCCceEEEEEECCCCc
Q psy16863 583 IYWYNKEGVVEASDKYHIMADGLGGY----SIEINYLEAVDDGEWKCVATSSSGV 633 (1075)
Q Consensus 583 v~W~~~~~~i~~~~~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~g~ 633 (1075)
|.|+++|..+...........+.+.+ .|.|.....+|+|.|+|.|.|....
T Consensus 380 v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l~ 434 (444)
T 1igt_B 380 VEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGLH 434 (444)
T ss_dssp EEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTSG
T ss_pred EEEEECCEEccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCcC
Confidence 99999998874221111111222222 4667767777899999999998643
No 44
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.98 E-value=7.3e-32 Score=297.65 Aligned_cols=263 Identities=22% Similarity=0.302 Sum_probs=201.7
Q ss_pred cCCCceeeccceeeecCCeEEEEEEEecC-CCCeEEEEECCEEcCCCCeEEEe-----------ecCCCceEEEEEEecC
Q psy16863 649 YRKPRFVESLKAVMTDDGLVSFECKVVGF-PTPTLQWFKDNEELKPGDVYQLT-----------GTSSLGSYCCVAKNVM 716 (1075)
Q Consensus 649 ~~~p~~~~~~~~~~~~g~~~~l~C~v~g~-p~p~v~W~k~g~~l~~~~~~~~~-----------~~~d~G~Y~C~a~N~~ 716 (1075)
+.+|.|.......+.+|+.+.|.|.+.+. |.+.++|+|+|..+..+.++.+. ..+|+|.|+|.|.|..
T Consensus 5 ~~~P~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 84 (317)
T 2y25_A 5 FTGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDR 84 (317)
T ss_dssp SSCCEEEEEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSS
T ss_pred cCCCcEeeeeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCC
Confidence 45678887776668899999999999987 78999999999999866544322 3479999999999999
Q ss_pred ceEEEEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEec----------CCCCeEEEEECC
Q psy16863 717 GKAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSI----------SPEPKVSWFRDD 786 (1075)
Q Consensus 717 g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g----------~p~p~v~W~k~g 786 (1075)
|....++.|.|.. +|.+...+....+..|+.+.|.|.+.+ .|.+.++|+|+|
T Consensus 85 g~~~~~~~l~v~~------------------~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~ 146 (317)
T 2y25_A 85 GKDKSRLKLVDEA------------------FKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNG 146 (317)
T ss_dssp CEEEEEECCSTHH------------------HHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESS
T ss_pred CcEEEEEEEEEec------------------CccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECC
Confidence 9887776665543 222222223334455666666666655 789999999999
Q ss_pred EEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEec---------------CCCCCCeee
Q psy16863 787 QQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVP---------------KHYKKPKFL 851 (1075)
Q Consensus 787 ~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~---------------~~~~~p~~~ 851 (1075)
..+..+.++.+... .+...|.|.+++.+|+|.|+|.|.|..|....++.|.|... .....|.+.
T Consensus 147 ~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~ 225 (317)
T 2y25_A 147 SAIRYSDRVKTGVT-GEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVL 225 (317)
T ss_dssp SBCCCCSSEEEEEC-SSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEE
T ss_pred EECCCCCCeEEecc-CCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCccc
Confidence 99988888877644 45678999999999999999999999999888777765420 111234454
Q ss_pred eecc--eeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCe----------eEEEECCCCceeeEEEEEEEEeCCeeE
Q psy16863 852 EELK--AVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDI----------HKIISGEDGTCCLGIYTCEAHNCMGTT 919 (1075)
Q Consensus 852 ~~~~--~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~----------~~i~~~~~~~~d~G~Y~C~a~N~~G~~ 919 (1075)
..+. ..+.+|+.++|.|.+.|.|.|.|+|+|||.++..+.+ ..|.+......|+|.|+|.|.|.+|..
T Consensus 226 ~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 305 (317)
T 2y25_A 226 GGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSE 305 (317)
T ss_dssp EBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEE
T ss_pred ccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeE
Confidence 4332 2477999999999999999999999999998875433 366667777789999999999999999
Q ss_pred EEEEEEEEecC
Q psy16863 920 SSSAALLGFED 930 (1075)
Q Consensus 920 ~~~~~l~v~~~ 930 (1075)
+.++.|.|..|
T Consensus 306 ~~~~~l~V~~P 316 (317)
T 2y25_A 306 TSDFTVSVFIP 316 (317)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEEEcC
Confidence 99999998744
No 45
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.97 E-value=4.8e-30 Score=279.17 Aligned_cols=266 Identities=18% Similarity=0.316 Sum_probs=202.8
Q ss_pred CCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEe-CCeEEec-CCcEEEEEcCCceEEEEEeeeeecCCceEEEEE
Q psy16863 550 APIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYN-KEGVVEA-SDKYHIMADGLGGYSIEINYLEAVDDGEWKCVA 627 (1075)
Q Consensus 550 ~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~-~~~~i~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 627 (1075)
|+.+...+.+..+.+|+.++|.|.+.+.+.+..+.|++ ++..+.. ..++.+...+.....|.|.+++.+|+|.|+|.|
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 45566778888999999999999999887434899999 6666653 345555544445679999999999999999999
Q ss_pred ECCCCceeeeeEEEEEeCCCCcCCCceeecc-ceeeecCCeEEEEEEEecCCCCeEEEEECCEEcCCC----------Ce
Q psy16863 628 TSSSGVKQFSAAYVHVLMPKNYRKPRFVESL-KAVMTDDGLVSFECKVVGFPTPTLQWFKDNEELKPG----------DV 696 (1075)
Q Consensus 628 ~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~-~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~l~~~----------~~ 696 (1075)
.|..|........+.|..+ |.+.... ...+.+|+.+.|.|.+.|.|.|.++|+|++..+... ..
T Consensus 82 ~n~~g~~~~~~~~l~v~~~-----~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 156 (291)
T 1qz1_A 82 TAEDGTQSEATVNVKIFQK-----LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY 156 (291)
T ss_dssp ECTTSCEEEEEEEEEEECC-----SEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSC
T ss_pred EcCCCCeeEEEEEEEeecc-----ccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCc
Confidence 9998765444455666544 3343333 234678999999999999999999999999877532 22
Q ss_pred EEEe--ecCCCceEEEEEEecCceEE--EEEEEEEEeccccCchhhhhhhccCCCCCeEEecc--ceeeeecCCeEEEEE
Q psy16863 697 YQLT--GTSSLGSYCCVAKNVMGKAE--SSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGL--KSCQATVNEEFKFTV 770 (1075)
Q Consensus 697 ~~~~--~~~d~G~Y~C~a~N~~g~~~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~g~~~~l~C 770 (1075)
+.+. ..+|.|.|+|.|.|..+... ..+.|.|.. +|.+.... ....+..|+.+.|.|
T Consensus 157 L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~------------------~p~~~~~~~~~~~~~~~g~~v~l~C 218 (291)
T 1qz1_A 157 LQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNV------------------PPTVQARQSIVNATANLGQSVTLVC 218 (291)
T ss_dssp EEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEE------------------EEEEEESCSEEEEETTSCCCEEEEE
T ss_pred EEEccCccccCeEEEEEEEecCCCceeeEEEEEEEec------------------CCcccccccccccccccCceEEEEE
Confidence 3332 34789999999999875433 345666653 55555432 356788999999999
Q ss_pred EEecCCCCeEEEEECCEEeecCC----cEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEe
Q psy16863 771 QVSISPEPKVSWFRDDQQVVESD----NVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNV 841 (1075)
Q Consensus 771 ~v~g~p~p~v~W~k~g~~i~~~~----~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~ 841 (1075)
.+.|.|.|.++|+|+|.++..+. ++.+. . ....|.|.+++.+|+|.|+|.|.|.+|....++.|.|..
T Consensus 219 ~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~--~-~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 219 DADGFPEPTMSWTKDGEPIENEEEDDEKHIFS--D-DSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp EEEEESCCEEEEEETTEECCCC--CCSSEEEC--T-TSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEeCCCcEEEEECCEECcCCCCCCcceEEc--C-CCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 99999999999999999997664 34332 2 234799999999999999999999999998899888864
No 46
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.97 E-value=9.4e-31 Score=304.24 Aligned_cols=355 Identities=15% Similarity=0.179 Sum_probs=215.2
Q ss_pred ccceEeecCCeEEEEEEEecCC--CCceEEEEeCC--eE---Ee--------------cCCcEEEEEcC-CceEEEEEee
Q psy16863 557 VENVKAKIGTSAILECQVLVPP--WPRSIYWYNKE--GV---VE--------------ASDKYHIMADG-LGGYSIEINY 614 (1075)
Q Consensus 557 ~~~~~v~~G~~~~L~C~~~~~p--~p~~v~W~~~~--~~---i~--------------~~~~~~~~~~~-~~~~~L~i~~ 614 (1075)
+..+.+.+|+.++|.|.+.+.+ .+ .+.||+.. .. +. ...++.+..++ .+...|.|.+
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (457)
T 1hzh_H 7 SGAEVKKPGASVKVSCQASGYRFSNF-VIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRS 85 (457)
T ss_dssp CCCEEECTTCCEEECEEEESSCGGGS-CEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred CCceEEcCCCCEEEEEEecCccccCc-EEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECC
Confidence 4456789999999999999875 44 79999842 21 10 13466665542 2457899999
Q ss_pred eeecCCceEEEEEECCCCc-----------eeeeeEEEEEeCCCCcCCCceee-ccceeeecCCeEEEEEEEecC-CC-C
Q psy16863 615 LEAVDDGEWKCVATSSSGV-----------KQFSAAYVHVLMPKNYRKPRFVE-SLKAVMTDDGLVSFECKVVGF-PT-P 680 (1075)
Q Consensus 615 ~~~~d~G~Y~C~a~n~~g~-----------~~~~~~~l~v~~p~~~~~p~~~~-~~~~~~~~g~~~~l~C~v~g~-p~-p 680 (1075)
++.+|+|.|+|.|.|..|. .......+.|.... ..+|.+.. .....+.+|+.+.|.|.+.|. |. +
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~ 164 (457)
T 1hzh_H 86 LRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSAS-TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 164 (457)
T ss_dssp CCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCC-CBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCC
T ss_pred CCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCC-CCCCeEEecCccccccCCCcEEEEEEEeEEeCCCe
Confidence 9999999999999998751 11123456665422 12344332 222335678899999999987 75 7
Q ss_pred eEEEEECCEEcC---------CCCeE------EEee--cCCCceEEEEEEecCceEEEEEEEEEEeccccCchhhhhhhc
Q psy16863 681 TLQWFKDNEELK---------PGDVY------QLTG--TSSLGSYCCVAKNVMGKAESSTQLTIEDIRNHLSEEDKLLLL 743 (1075)
Q Consensus 681 ~v~W~k~g~~l~---------~~~~~------~~~~--~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~~~~~~ 743 (1075)
.++|+|++..+. .+..| .+.. .+| |.|+|.|.|..+.......+.+........-.... ..
T Consensus 165 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~-~~ 242 (457)
T 1hzh_H 165 TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCP-AP 242 (457)
T ss_dssp EEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCC-CC
T ss_pred EEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCC-Cc
Confidence 999999985432 23333 2222 256 99999999998876655554433210000000000 00
Q ss_pred cCCCCCeE-Eeccceee-eecCCeEEEEEEEecCCCC----eEEEEECCEEeecCCcEEEEEeeCcE----EEEEEcccc
Q psy16863 744 TNNKAPKF-IEGLKSCQ-ATVNEEFKFTVQVSISPEP----KVSWFRDDQQVVESDNVKILKETLGV----CHLKIHALE 813 (1075)
Q Consensus 744 ~~~~~p~~-~~~~~~~~-~~~g~~~~l~C~v~g~p~p----~v~W~k~g~~i~~~~~~~~~~~~~~~----~~L~I~~~~ 813 (1075)
....+|.+ +..+.... +.+|+.+.|.|.+.|.|++ .|+|+|+|.++............++. ..|.|....
T Consensus 243 ~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d 322 (457)
T 1hzh_H 243 ELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQD 322 (457)
T ss_dssp CCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHH
T ss_pred cccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHH
Confidence 01124554 44433322 6789999999999998653 99999999988643222222222232 123333444
Q ss_pred CCCCeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeec-ce-eecCCCeEEEEEEEEccCCC--eeEEEECCEEcCC
Q psy16863 814 VADQAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEEL-KA-VLSEGGAVNLECKVIGVPQP--TLKWFKDGRELKA 889 (1075)
Q Consensus 814 ~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~-~~-~~~~g~~~~L~C~v~g~p~p--~v~W~k~g~~l~~ 889 (1075)
.+|+|.|+|.|.|..+....+..+.+. .....+|.+.... .. .+..|+ ++|.|.+.|.|+| .|+|+|||.+|..
T Consensus 323 ~~d~G~Y~C~a~n~~~~~~~~~~v~~~-~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~ 400 (457)
T 1hzh_H 323 WLNGKEYKCKVSNKALPAPIEKTISKA-KGQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENN 400 (457)
T ss_dssp HHHTCCEEEEEECTTSSSCEEEEECCC-CCCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCC
T ss_pred ccCCCcEEEEEeCCCCCCcceEEEEcc-cCCCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECcc
Confidence 455999999999987665333333221 1112345443222 11 233444 9999999997554 8999999999864
Q ss_pred CCeeEEEECCCC--------------ceeeEEEEEEEEeCCe
Q psy16863 890 GDIHKIISGEDG--------------TCCLGIYTCEAHNCMG 917 (1075)
Q Consensus 890 ~~~~~i~~~~~~--------------~~d~G~Y~C~a~N~~G 917 (1075)
+....+....++ ..|.|.|+|.|.|..-
T Consensus 401 ~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 442 (457)
T 1hzh_H 401 YKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 442 (457)
T ss_dssp EEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred eeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCC
Confidence 321111111111 1357999999999754
No 47
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.97 E-value=1.5e-30 Score=302.56 Aligned_cols=359 Identities=12% Similarity=0.124 Sum_probs=226.5
Q ss_pred cccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCC---------------Ccc----ccCCCeEEEee--CCe
Q psy16863 249 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQG---------------DHP----IFGNRFRAINR--DGR 307 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~---------------~~~----~~~~~~~~~~~--~~~ 307 (1075)
+..+.+.+|+.++|.|.+.+.+. ....+.|++.+ ... ....|+.+..+ ++.
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~--------~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 78 (457)
T 1hzh_H 7 SGAEVKKPGASVKVSCQASGYRF--------SNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 78 (457)
T ss_dssp CCCEEECTTCCEEECEEEESSCG--------GGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred CCceEEcCCCCEEEEEEecCccc--------cCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCE
Confidence 34567889999999999875320 02233443321 000 01356776654 456
Q ss_pred EEEEEcccCCCCCEEEEEEEEeCCe------------eEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEec
Q psy16863 308 TELNIRRVRRDDGGRYSVTASNESG------------YSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRS 375 (1075)
Q Consensus 308 ~~L~I~~~~~~d~G~Y~C~a~n~~g------------~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g 375 (1075)
.+|.|.+++.+|+|.|+|.|.|..| .....+.|.|......+|.+........+.+|+.++|.|.+.|
T Consensus 79 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g 158 (457)
T 1hzh_H 79 AYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKD 158 (457)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEES
T ss_pred EEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeE
Confidence 7999999999999999999999765 2234567777654444676655555556789999999999988
Q ss_pred C-CC-cEEEEEECCEecCCCCcEEEE-EcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCC------
Q psy16863 376 P-TE-IKIHWYRNDRKLEENKIYRTQ-HDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPK------ 443 (1075)
Q Consensus 376 ~-p~-~~v~W~k~g~~l~~~~~~~~~-~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~------ 443 (1075)
. |. +.|+|+|+|..+......... .++.. ..|.|.++..+| |.|+|.|.|..+.......+.+...+
T Consensus 159 ~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~ 237 (457)
T 1hzh_H 159 YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCP 237 (457)
T ss_dssp BBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCC
T ss_pred EeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccC
Confidence 6 64 899999999765321111111 22322 368999999999 99999999988776555555443211
Q ss_pred ------CCCCCee-eeecce-E-EecCCeEEEEEEEECCCCC----eEEEEeCCEeccCCC----------EEEEE-eCC
Q psy16863 444 ------AYKAPFF-TKELEA-I-LTEQGTVSLECKVMGIPTP----QLIWYKDNKKIKAGD----------IFALT-ANP 499 (1075)
Q Consensus 444 ------~~~~p~~-~~~~~~-~-~~~g~~v~l~C~~~g~p~~----~v~W~~~g~~l~~~~----------~~~l~-i~~ 499 (1075)
...+|.+ ..++.. . +.+|+.+.|.|.+.|.|++ .|+|+|+|.++.... .+.+. ...
T Consensus 238 ~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~ 317 (457)
T 1hzh_H 238 PCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLT 317 (457)
T ss_dssp SCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEEC
T ss_pred CCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEE
Confidence 1123443 332222 1 5679999999999998653 999999998875332 11111 111
Q ss_pred CCCCC---cEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeee-eeccceEeecCCeEEEEEEEe
Q psy16863 500 KDPSS---LGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFI-KEVENVKAKIGTSAILECQVL 575 (1075)
Q Consensus 500 ~~~~d---~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~G~~~~L~C~~~ 575 (1075)
+...| +|.|+|.|.|..+.......+.+. .... .+|.+. ..+....+..|+ ++|.|.+.
T Consensus 318 i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~---------------~~~~-~~P~v~~~~~~~~~~~~~~-~~l~C~~~ 380 (457)
T 1hzh_H 318 VLHQDWLNGKEYKCKVSNKALPAPIEKTISKA---------------KGQP-REPQVYTLPPSRDELTKNQ-VSLTCLVK 380 (457)
T ss_dssp CCHHHHHHTCCEEEEEECTTSSSCEEEEECCC---------------CCCC-BCCEEEEECCCGGGGGSSE-EEEEEEEE
T ss_pred ECHHHccCCCcEEEEEeCCCCCCcceEEEEcc---------------cCCC-CCCeEEEECCCccccCCCc-EEEEEEEE
Confidence 23444 999999999876654333333221 0011 233333 333333344555 99999999
Q ss_pred cCCCC-ceEEEEeCCeEEecCCcEEEEEcCCceE----EEEEeeeeecCCceEEEEEECCCCc
Q psy16863 576 VPPWP-RSIYWYNKEGVVEASDKYHIMADGLGGY----SIEINYLEAVDDGEWKCVATSSSGV 633 (1075)
Q Consensus 576 ~~p~p-~~v~W~~~~~~i~~~~~~~~~~~~~~~~----~L~i~~~~~~d~G~Y~C~a~n~~g~ 633 (1075)
+.++| ..|.|+++|..+..........++.+.+ .|.|.....+|+|.|+|.|.|....
T Consensus 381 g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 443 (457)
T 1hzh_H 381 GFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 443 (457)
T ss_dssp EEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred eEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCC
Confidence 86433 4899999998875332222222222222 3556666667899999999998654
No 48
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.97 E-value=7.2e-30 Score=277.74 Aligned_cols=269 Identities=17% Similarity=0.274 Sum_probs=210.8
Q ss_pred CCCccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCcccc-CCCeEEEeeCCeEEEEEcccCCCC
Q psy16863 241 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIF-GNRFRAINRDGRTELNIRRVRRDD 319 (1075)
Q Consensus 241 ~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~L~I~~~~~~d 319 (1075)
.+|.+...+.+..+.+|+.++|.|.+.+ .+ ..+.|++.++..+. +.++.+..++...+|.|.+++.+|
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~----------~p-~~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D 71 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIG----------EP-ESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIED 71 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEES----------CC-SEEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGG
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeC----------CC-CceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCccc
Confidence 3577788888999999999999888764 23 37889885555544 778888888888899999999999
Q ss_pred CEEEEEEEEeCCeeE-EEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCC--CCcE
Q psy16863 320 GGRYSVTASNESGYS-TAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEE--NKIY 396 (1075)
Q Consensus 320 ~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~--~~~~ 396 (1075)
+|.|+|.|.|..|.. +..+.|.|.. +|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|++..+.. ..++
T Consensus 72 ~G~Y~C~~~n~~g~~~~~~~~l~v~~----~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~ 147 (291)
T 2wim_A 72 AGIYRCQATDAKGQTQEATVVLEIYQ----KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRF 147 (291)
T ss_dssp CEEEEEEEECSSSCEEEEEEEEEEEC----CCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSE
T ss_pred CEEEEEEEecccCceEEEEEEEEecC----CcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceE
Confidence 999999999988864 4566777763 67777677788899999999999999999999999999988764 3455
Q ss_pred EEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCcee--eEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCC
Q psy16863 397 RTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSH--CSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIP 474 (1075)
Q Consensus 397 ~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~--~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p 474 (1075)
.+..++ .|.|.+++.+|+|.|+|.|.|..+... ....+.|..+|.+..+.. .....+.+|+.+.|.|.+.|.|
T Consensus 148 ~~~~~~---~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~--~~~~~~~~g~~~~l~C~~~g~p 222 (291)
T 2wim_A 148 AMLANN---NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQK--SFNATAERGEEMTFSCRASGSP 222 (291)
T ss_dssp EECTTS---CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCS--EEECCSSSCCEEEEECBCCCBS
T ss_pred EEccCC---CEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcc--cccceecCCCeEEEEEEeecCC
Confidence 444444 389999999999999999999886543 345566666554322110 0122367899999999999999
Q ss_pred CCeEEEEeCCEeccCCCE-------EEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEec
Q psy16863 475 TPQLIWYKDNKKIKAGDI-------FALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARG 529 (1075)
Q Consensus 475 ~~~v~W~~~g~~l~~~~~-------~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~ 529 (1075)
.+.++|+++|..+..+.+ ..|.|..+..+|+|.|+|.|.|..|...+++.+.|.+
T Consensus 223 ~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 284 (291)
T 2wim_A 223 EPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 284 (291)
T ss_dssp CCEEEEEETTEECCCTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC--
T ss_pred CCeEEEEECCEECcCCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEE
Confidence 999999999999875433 3688999999999999999999999999999999874
No 49
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.97 E-value=1e-29 Score=276.48 Aligned_cols=266 Identities=18% Similarity=0.265 Sum_probs=209.5
Q ss_pred CCccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCcccc--CCCeEEEe-eCCeEEEEEcccCCC
Q psy16863 242 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIF--GNRFRAIN-RDGRTELNIRRVRRD 318 (1075)
Q Consensus 242 ~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~~~--~~~~~~~~-~~~~~~L~I~~~~~~ 318 (1075)
++.+...+.+..+.+|+.++|.|.+.+.+ +...+.|++.++..+. ..++.+.. .+....|.|.+++.+
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~---------~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 72 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDA---------KDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANID 72 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCC---------SCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGG
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCC---------CCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCC
Confidence 45667778888899999999998876421 2467889885555554 34555543 456779999999999
Q ss_pred CCEEEEEEEEeCCe-eEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCC--Cc
Q psy16863 319 DGGRYSVTASNESG-YSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEEN--KI 395 (1075)
Q Consensus 319 d~G~Y~C~a~n~~g-~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~--~~ 395 (1075)
|+|.|+|.|.|..| ..+..+.|.|.. +|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+|+|..+... .+
T Consensus 73 D~G~Y~C~~~n~~g~~~~~~~~l~v~~----~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~ 148 (291)
T 1qz1_A 73 DAGIYKCVVTAEDGTQSEATVNVKIFQ----KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVR 148 (291)
T ss_dssp GCEEEEEEEECTTSCEEEEEEEEEEEC----CSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTT
T ss_pred CCEEEEEEEEcCCCCeeEEEEEEEeec----cccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCce
Confidence 99999999999885 456677777773 788888888889999999999999999999999999999887543 34
Q ss_pred EEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCcee--eEEEEEeecCCCCCCCeeeeec---ceEEecCCeEEEEEEE
Q psy16863 396 YRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSH--CSCELSVLVPKAYKAPFFTKEL---EAILTEQGTVSLECKV 470 (1075)
Q Consensus 396 ~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~--~s~~l~V~~~~~~~~p~~~~~~---~~~~~~g~~v~l~C~~ 470 (1075)
+....++ .|.|.++..+|+|.|+|.|.|..+... ....|.|..+|. +.... ...+.+|+.+.|.|.+
T Consensus 149 ~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~-----~~~~~~~~~~~~~~g~~v~l~C~~ 220 (291)
T 1qz1_A 149 FIVLSNN---YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPT-----VQARQSIVNATANLGQSVTLVCDA 220 (291)
T ss_dssp EEECTTS---CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEE-----EEESCSEEEEETTSCCCEEEEEEE
T ss_pred EEEccCC---cEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCc-----ccccccccccccccCceEEEEEEE
Confidence 4333333 489999999999999999999765443 345566655443 22211 2246789999999999
Q ss_pred ECCCCCeEEEEeCCEeccCCC-----------EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEe
Q psy16863 471 MGIPTPQLIWYKDNKKIKAGD-----------IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIAR 528 (1075)
Q Consensus 471 ~g~p~~~v~W~~~g~~l~~~~-----------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~ 528 (1075)
.|.|.|.+.|+++|..+..+. ...|.|..+..+|+|.|+|.|.|..|....++.|.|.
T Consensus 221 ~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 289 (291)
T 1qz1_A 221 DGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVF 289 (291)
T ss_dssp EEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEE
Confidence 999999999999999987653 2369999999999999999999999999999988886
No 50
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.97 E-value=1.3e-29 Score=275.69 Aligned_cols=275 Identities=20% Similarity=0.288 Sum_probs=211.9
Q ss_pred cccceeecceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEee-CCCceeccCcEEEEecCCeEEEEEceeccCCC
Q psy16863 135 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRA-QGDHPIFGNRFRAINRDGRTELNIRRVRRDDG 213 (1075)
Q Consensus 135 ~p~~~~~~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 213 (1075)
+|.+...+.+..+.+|+.++|.|.+.+. | ..+.|++ +|..+....++.+...+....|.|.+++.+|+
T Consensus 4 ~p~v~~~~~~~~v~~G~~v~l~C~~~~~----------p-~~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~ 72 (291)
T 2wim_A 4 LLQVTISLSKVELSVGESKFFTCTAIGE----------P-ESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDA 72 (291)
T ss_dssp CCEEEESCSEEEEETTCCEEEEEEEESC----------C-SEEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGC
T ss_pred CceEEEeccceEecCCCcEEEEEEEeCC----------C-CceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccC
Confidence 4667778888999999999988887653 3 3789999 55555567788777777788999999999999
Q ss_pred eEEEEEEEcCceeE-EEEEEEeeeccCCCCCccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCc
Q psy16863 214 GRYSVTASNESGYS-TAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDH 292 (1075)
Q Consensus 214 G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~ 292 (1075)
|.|+|.|.|..|.. +..+.|.|. .+|.+...+....+.+|+.+.|.|.+.+ .+.+.+.|++++..
T Consensus 73 G~Y~C~~~n~~g~~~~~~~~l~v~----~~~~~~~~~~~~~v~~G~~v~l~C~~~~----------~p~~~v~W~~~~~~ 138 (291)
T 2wim_A 73 GIYRCQATDAKGQTQEATVVLEIY----QKLTFREVVSPQEFKQGEDAEVVCRVSS----------SPAPAVSWLYHNEE 138 (291)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEEE----CCCBCCSCCCSEEEETTSCEEECCCCBC----------SSCCEEEEECC---
T ss_pred EEEEEEEecccCceEEEEEEEEec----CCcceEeCCCChhhcCCCCEEEEEEEcc----------CCCCEEEEEECCcc
Confidence 99999999998876 456666665 4566677777888999999999887654 34567888887765
Q ss_pred ccc--CCCeEEEeeCCeEEEEEcccCCCCCEEEEEEEEeCCee--EEEEEEEEEecCCCCCCeeeeecC--ceeeccCCe
Q psy16863 293 PIF--GNRFRAINRDGRTELNIRRVRRDDGGRYSVTASNESGY--STAKFELSVESQVPDAPAFIRRLH--DIAVKVGTR 366 (1075)
Q Consensus 293 ~~~--~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~g~--~~~~~~l~V~~~~~~~p~~~~~~~--~~~v~~G~~ 366 (1075)
... ..++.+...+ .|.|.+++.+|+|.|+|.|.|..+. ....+.+.|.. +|.+..... ...+.+|+.
T Consensus 139 ~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~----~p~~~~~~~~~~~~~~~g~~ 211 (291)
T 2wim_A 139 VTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNV----PPAISMPQKSFNATAERGEE 211 (291)
T ss_dssp -CBCCCSSEEECTTS---CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEB----CCCCBCSCSEEECCSSSCCE
T ss_pred ccccCCceEEEccCC---CEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEecc----CCccccCcccccceecCCCe
Confidence 543 3444433222 6999999999999999999997643 34555666664 555544333 457889999
Q ss_pred EEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCC
Q psy16863 367 ARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPK 443 (1075)
Q Consensus 367 v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~ 443 (1075)
+.|.|.+.|.|.+.|.|+|+|..+..+.++.+...+ ..|.|.++..+|+|.|+|.|.|..|....++.|.|..++
T Consensus 212 ~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 212 MTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSN--TELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp EEEECBCCCBSCCEEEEEETTEECCCTTTEEECSTT--CEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC----
T ss_pred EEEEEEeecCCCCeEEEEECCEECcCCccEEEcCCc--cEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEec
Confidence 999999999999999999999999888777654433 358999999999999999999999999999999988764
No 51
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.97 E-value=2.6e-29 Score=293.27 Aligned_cols=355 Identities=14% Similarity=0.165 Sum_probs=216.8
Q ss_pred ccceEeecCCeEEEEEEEecCC-CCceEEEEeCC--eE---Ee--------------cCCcEEEEEcC-CceEEEEEeee
Q psy16863 557 VENVKAKIGTSAILECQVLVPP-WPRSIYWYNKE--GV---VE--------------ASDKYHIMADG-LGGYSIEINYL 615 (1075)
Q Consensus 557 ~~~~~v~~G~~~~L~C~~~~~p-~p~~v~W~~~~--~~---i~--------------~~~~~~~~~~~-~~~~~L~i~~~ 615 (1075)
+..+.+.+|+.++|.|.+.+.+ ....+.||+.. +. +. ...++.+..+. .+...|.|.++
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (475)
T 1iga_A 8 SGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSL 87 (475)
T ss_pred CCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCC
Confidence 4567889999999999998764 12379999853 11 10 12455554432 24568999999
Q ss_pred eecCCceEEEEEECCCCc-----eeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEEecC-CC-C-eEEEEEC
Q psy16863 616 EAVDDGEWKCVATSSSGV-----KQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKVVGF-PT-P-TLQWFKD 687 (1075)
Q Consensus 616 ~~~d~G~Y~C~a~n~~g~-----~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v~g~-p~-p-~v~W~k~ 687 (1075)
+.+|+|.|.|.+.|..|. .......|.|.... ..+|.+.......+.+|+.+.|.|.+.|. |. | .|+|+++
T Consensus 88 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~i~~~~~~~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~ 166 (475)
T 1iga_A 88 RPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSAS-PTSPKVFPLSLCSTQPDGNVVIACLVQGFFPQEPLSVTWSES 166 (475)
T ss_pred ChhhCEEEEEEEeccCCCccceeeecCceEEEeccCC-CcCCeEEecCccccCCCCeEEEEEEEeeecCCCceEEEEcCC
Confidence 999999999999998762 11123355554311 12344332222223578899999999987 66 5 9999998
Q ss_pred CEEcC----------CCCeEEEe------e--cCCCceEEEEEEecCceE-EEEEEEEEEeccccCchhhhhhh--ccCC
Q psy16863 688 NEELK----------PGDVYQLT------G--TSSLGSYCCVAKNVMGKA-ESSTQLTIEDIRNHLSEEDKLLL--LTNN 746 (1075)
Q Consensus 688 g~~l~----------~~~~~~~~------~--~~d~G~Y~C~a~N~~g~~-~~~~~l~V~~~~~~~~~~~~~~~--~~~~ 746 (1075)
+.... .+..|.+. . .+|.|.|+|.|.|..|.. ...+.|.|...+. ........ ....
T Consensus 167 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~--~~~~~~~~~~~~~~ 244 (475)
T 1iga_A 167 GQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPP--TPSPSTPPTPSPSC 244 (475)
T ss_pred CcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcc--cccccccccCCCCC
Confidence 75321 22233322 1 257899999999998742 1222322311000 00000000 0000
Q ss_pred CCCeE-EeccceeeeecCCeEEEEEEEecCCC---CeEEEEECCEEeecCCcEEEEEeeC----cEEEEEEccccCCCCe
Q psy16863 747 KAPKF-IEGLKSCQATVNEEFKFTVQVSISPE---PKVSWFRDDQQVVESDNVKILKETL----GVCHLKIHALEVADQA 818 (1075)
Q Consensus 747 ~~p~~-~~~~~~~~~~~g~~~~l~C~v~g~p~---p~v~W~k~g~~i~~~~~~~~~~~~~----~~~~L~I~~~~~~D~G 818 (1075)
.+|.+ +..+....+.+|+.+.|.|.+.|.++ +.|+| ++..+............. ....|.|.+++.+|+|
T Consensus 245 ~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G 322 (475)
T 1iga_A 245 CHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGK 322 (475)
T ss_pred CCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCC
Confidence 24443 44444444689999999999998754 69999 444443221111110001 2347999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecc--eeecCCCeEEEEEEEEccCC--CeeEEEECCEEcCCCCe--
Q psy16863 819 EWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELK--AVLSEGGAVNLECKVIGVPQ--PTLKWFKDGRELKAGDI-- 892 (1075)
Q Consensus 819 ~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~--~~~~~g~~~~L~C~v~g~p~--p~v~W~k~g~~l~~~~~-- 892 (1075)
.|+|.|.|..|.......|.+. ....+|.+..... ..+.+|+.++|.|.+.|.++ +.|+|+|||.+|..+..
T Consensus 323 ~Y~C~a~n~~~~~~~~~~v~~~--~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~ 400 (475)
T 1iga_A 323 TFTCTAAYPESKTPLTATLSKS--GNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLT 400 (475)
T ss_pred cEEEEEEcCCCCCceEEEeecC--CCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceee
Confidence 9999999999986544444331 1123444432221 12568899999999999743 58999999999865421
Q ss_pred -------------e----EEEECCCCceeeEEEEEEEEeCCee
Q psy16863 893 -------------H----KIISGEDGTCCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 893 -------------~----~i~~~~~~~~d~G~Y~C~a~N~~G~ 918 (1075)
+ .|.+......|.|.|+|.|.|....
T Consensus 401 ~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 401 WASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred cccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 1 1222222234689999999998654
No 52
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.97 E-value=3.8e-32 Score=313.64 Aligned_cols=359 Identities=13% Similarity=0.136 Sum_probs=230.1
Q ss_pred cccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCC-Ccc------------------ccCCCeEEEee--CCe
Q psy16863 249 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQG-DHP------------------IFGNRFRAINR--DGR 307 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~-~~~------------------~~~~~~~~~~~--~~~ 307 (1075)
+..+.+.+|+.++|.|.+.+... +...+.|++++ +.. ....|+.+..+ ++.
T Consensus 6 ~~~~~v~~G~~v~L~C~~~~~~~--------~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 77 (434)
T 1igy_B 6 SGAELARPGASVKMSCKASGYTF--------TTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNT 77 (434)
T ss_dssp CCCCEECTBCCEEECCEECSSCG--------GGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCB
T ss_pred CCCeEecCCCCEEEEEEccCCcc--------cCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCE
Confidence 45567899999999999875310 12234444432 110 01345555433 345
Q ss_pred EEEEEcccCCCCCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecC-CCc-EEEEEE
Q psy16863 308 TELNIRRVRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSP-TEI-KIHWYR 385 (1075)
Q Consensus 308 ~~L~I~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~-p~~-~v~W~k 385 (1075)
.+|.|.+++.+|+|.|+|.|.|..+.....+.|.|....+.+|.+........+.+|+.++|.|.+.|. |.+ .|.|+|
T Consensus 78 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k 157 (434)
T 1igy_B 78 ANIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 157 (434)
T ss_dssp BCEEECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETT
T ss_pred EEEEECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEee
Confidence 589999999999999999999965544455677776433445655543444456899999999999885 665 999999
Q ss_pred CCEecCCCCcEEEEEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeec---------CCCCCCCeeeee
Q psy16863 386 NDRKLEENKIYRTQHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLV---------PKAYKAPFFTKE 453 (1075)
Q Consensus 386 ~g~~l~~~~~~~~~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~---------~~~~~~p~~~~~ 453 (1075)
+|..+...........+.. ..|.|.++..+| |.|+|.|.|..|.......+.+.. .+.. +..+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~-p~v~~~~ 235 (434)
T 1igy_B 158 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEV-SSVFIFP 235 (434)
T ss_dssp TTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSS-CCEEEEC
T ss_pred CCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcC-cEEEEeC
Confidence 9975421000001111221 358999999889 999999999999865555554321 1111 2233333
Q ss_pred cceE--EecCCeEEEEEEEECCC----CCeEEEEeCCEeccCCC--------------EEEEEeCCCCCCCcEEEEEEEE
Q psy16863 454 LEAI--LTEQGTVSLECKVMGIP----TPQLIWYKDNKKIKAGD--------------IFALTANPKDPSSLGTYTCEAV 513 (1075)
Q Consensus 454 ~~~~--~~~g~~v~l~C~~~g~p----~~~v~W~~~g~~l~~~~--------------~~~l~i~~~~~~d~G~Y~C~a~ 513 (1075)
+... +.+|+.+.|.|.+.|.| .+.|+|+|+|..+.... ...|.|..+..+|+|.|+|.|.
T Consensus 236 p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 315 (434)
T 1igy_B 236 PKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVN 315 (434)
T ss_dssp CCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBC
T ss_pred CChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEE
Confidence 3222 77899999999999884 35899999998874321 1257788888889999999999
Q ss_pred ecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecC-CCCceEEEEeCCeEE
Q psy16863 514 NCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVP-PWPRSIYWYNKEGVV 592 (1075)
Q Consensus 514 n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~-p~p~~v~W~~~~~~i 592 (1075)
|..|.......+.+. +... .+|.+...+.......|+.++|.|.+.+. |.+..|+|+++|..+
T Consensus 316 n~~~~~~~~~~v~~~---------------~~~~-~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l 379 (434)
T 1igy_B 316 SAAFPAPIEKTISKT---------------KGKP-RAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAP 379 (434)
T ss_dssp CSSCSSCCCCCCCCC---------------CSCC-BCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCC
T ss_pred CCCCCCceeEEEecc---------------CCCC-cCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEec
Confidence 988864222221110 0111 23333332222223457789999999984 444589999999887
Q ss_pred ecCCcEEEEEcCCce----EEEEEeeeeecCCceEEEEEECCCCc
Q psy16863 593 EASDKYHIMADGLGG----YSIEINYLEAVDDGEWKCVATSSSGV 633 (1075)
Q Consensus 593 ~~~~~~~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~a~n~~g~ 633 (1075)
..........++.+. ..|.|.....+|+|.|+|.|.|....
T Consensus 380 ~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 380 ENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp SCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred CCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 432111111122222 24677777778899999999998754
No 53
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.97 E-value=1.8e-28 Score=286.22 Aligned_cols=359 Identities=11% Similarity=0.136 Sum_probs=228.9
Q ss_pred cccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCC--Ccc-----------------ccCCCeEEEee--C
Q psy16863 247 RRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQG--DHP-----------------IFGNRFRAINR--D 305 (1075)
Q Consensus 247 ~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~--~~~-----------------~~~~~~~~~~~--~ 305 (1075)
..+..+.+.+|+.++|.|.+.+.. .....+.|++.+ ..+ ....|+.+..+ +
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~--------~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~ 77 (475)
T 1iga_A 6 EQSGAEVKKPGASVKVSCKASGYS--------FTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSA 77 (475)
T ss_pred ccCCcEEEeCCCCEEEEEEecCCC--------CCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCC
Confidence 345667889999999999987431 012233444321 100 01346665543 3
Q ss_pred CeEEEEEcccCCCCCEEEEEEEEeCCe------eEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecC-CC
Q psy16863 306 GRTELNIRRVRRDDGGRYSVTASNESG------YSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSP-TE 378 (1075)
Q Consensus 306 ~~~~L~I~~~~~~d~G~Y~C~a~n~~g------~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~-p~ 378 (1075)
+..+|.|.+++.+|+|.|.|.+.|..| .....+.|.|....+.+|.+.... ...+.+|+.++|.|.+.|. |.
T Consensus 78 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~-~~~~~~g~~v~L~C~~~g~~P~ 156 (475)
T 1iga_A 78 TTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLS-LCSTQPDGNVVIACLVQGFFPQ 156 (475)
T ss_pred CeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecC-ccccCCCCeEEEEEEEeeecCC
Confidence 456899999999999999999999765 223456777764333456554332 2234799999999999886 55
Q ss_pred -c-EEEEEECCEecCCCCcEEE--EEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCC--------
Q psy16863 379 -I-KIHWYRNDRKLEENKIYRT--QHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPK-------- 443 (1075)
Q Consensus 379 -~-~v~W~k~g~~l~~~~~~~~--~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~-------- 443 (1075)
+ .|.|+|++..+........ ..+|.. ..|.|..+..+|+|.|+|.|.|..+.. .+..+.+.++.
T Consensus 157 ~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~-~~~~v~l~V~~~~~~~~~~ 235 (475)
T 1iga_A 157 EPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS-QDVTVPCPVPSTPPTPSPS 235 (475)
T ss_pred CceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCc-eeeeEecccccCccccccc
Confidence 4 9999999854321100001 122322 358898988899999999999998742 23334432211
Q ss_pred -------CCCCCee-eeecce-EEecCCeEEEEEEEECCCC---CeEEEEeCCEeccC-----------C---CEEEEEe
Q psy16863 444 -------AYKAPFF-TKELEA-ILTEQGTVSLECKVMGIPT---PQLIWYKDNKKIKA-----------G---DIFALTA 497 (1075)
Q Consensus 444 -------~~~~p~~-~~~~~~-~~~~g~~v~l~C~~~g~p~---~~v~W~~~g~~l~~-----------~---~~~~l~i 497 (1075)
...+|.+ ..++.. .+.+|+.+.|.|.+.|.++ +.|+| ++..+.. + ....|.|
T Consensus 236 ~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I 313 (475)
T 1iga_A 236 TPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPG 313 (475)
T ss_pred ccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEE
Confidence 1113333 222222 2578999999999998754 59999 4444321 1 1235889
Q ss_pred CCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecC
Q psy16863 498 NPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVP 577 (1075)
Q Consensus 498 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~ 577 (1075)
..+..+|+|.|+|.|.|..|.......+.+.. ...+|......+....+.+|+.++|.|.+.+.
T Consensus 314 ~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~----------------~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~ 377 (475)
T 1iga_A 314 CAEPWNHGKTFTCTAAYPESKTPLTATLSKSG----------------NTFRPEVHLLPPPSEELALNELVTLTCLARGF 377 (475)
T ss_pred chHHhccCCcEEEEEEcCCCCCceEEEeecCC----------------CCCCCeEEEECCChHHhccCCceEEEEEEeee
Confidence 99999999999999999998765444443210 01123333333333346789999999999986
Q ss_pred C-CCceEEEEeCCeEEecCCcEE--EEEc---CCce----EEEEEeeeeecCCceEEEEEECCCCc
Q psy16863 578 P-WPRSIYWYNKEGVVEASDKYH--IMAD---GLGG----YSIEINYLEAVDDGEWKCVATSSSGV 633 (1075)
Q Consensus 578 p-~p~~v~W~~~~~~i~~~~~~~--~~~~---~~~~----~~L~i~~~~~~d~G~Y~C~a~n~~g~ 633 (1075)
+ .+..|.|+++|..+....... ...+ +.+. ..|.|.....+|+|.|+|.|.|....
T Consensus 378 ~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 378 SPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred ECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 3 334899999998876543111 1111 2222 24777777788899999999998754
No 54
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.97 E-value=2.8e-31 Score=295.21 Aligned_cols=273 Identities=19% Similarity=0.335 Sum_probs=143.2
Q ss_pred ceeeecCCeEEEEEEEecC-CCCeEEEEECCEEcCCCCeEEEe---------ecCCCceEEEEEEecCceEEEEEEEEEE
Q psy16863 659 KAVMTDDGLVSFECKVVGF-PTPTLQWFKDNEELKPGDVYQLT---------GTSSLGSYCCVAKNVMGKAESSTQLTIE 728 (1075)
Q Consensus 659 ~~~~~~g~~~~l~C~v~g~-p~p~v~W~k~g~~l~~~~~~~~~---------~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 728 (1075)
...+.+|+.+.|.|.+.+. |.+.++|+|+|..+..+.++.+. ..+|+|.|+|.|.|. |.....+.|.|.
T Consensus 17 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l~V~ 95 (334)
T 1ry7_B 17 QLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFSVRVT 95 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeC-CeEEEEEEEEEe
Confidence 3457789999999999986 67899999999988766554332 347999999999998 877777888887
Q ss_pred eccccCchh----hhhhhccCCCCCeEEecc----ceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEe
Q psy16863 729 DIRNHLSEE----DKLLLLTNNKAPKFIEGL----KSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKE 800 (1075)
Q Consensus 729 ~~~~~~~~~----~~~~~~~~~~~p~~~~~~----~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~ 800 (1075)
..+...... ..........+|.|..+. ....+..|+.+.|.|.+.|.|.|.++|+|+|..+....++.....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~ 175 (334)
T 1ry7_B 96 DAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKL 175 (334)
T ss_dssp -----------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCC
T ss_pred ccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceec
Confidence 532111000 000000111355555432 235688999999999999999999999999998876554321112
Q ss_pred eCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeee--ecceeecCCCeEEEEEEEEccCCCee
Q psy16863 801 TLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLE--ELKAVLSEGGAVNLECKVIGVPQPTL 878 (1075)
Q Consensus 801 ~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~--~~~~~~~~g~~~~L~C~v~g~p~p~v 878 (1075)
..+...|.|.+++.+|+|.|+|.|.|..|....++.|.|...+. .+|.+.. +....+.+|+.++|.|.+.|.|.|.|
T Consensus 176 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~-~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v 254 (334)
T 1ry7_B 176 RHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSP-HRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHI 254 (334)
T ss_dssp CTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCC-SSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEE
T ss_pred ccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCC-CCCceEecCCCceEEeCCCCEEEEEEEecCCCCeE
Confidence 22345799999999999999999999999998888898886432 1233322 12234778999999999999999999
Q ss_pred EEEE----CCEEcCCCCe------------------eEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEecCChh
Q psy16863 879 KWFK----DGRELKAGDI------------------HKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFEDKSQ 933 (1075)
Q Consensus 879 ~W~k----~g~~l~~~~~------------------~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~ 933 (1075)
+|+| ||..+..+.. ..|.+......|+|.|+|.|.|.+|..++++.|.|.+.+.+
T Consensus 255 ~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 331 (334)
T 1ry7_B 255 QWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEE 331 (334)
T ss_dssp EEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCCC
T ss_pred EEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCCC
Confidence 9999 7777654321 25777777788999999999999999999999999866543
No 55
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.96 E-value=2.1e-28 Score=269.15 Aligned_cols=271 Identities=17% Similarity=0.220 Sum_probs=199.3
Q ss_pred ceeeccCCeEEEEEEEe-cCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEE
Q psy16863 358 DIAVKVGTRARLLVEIR-SPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCE 436 (1075)
Q Consensus 358 ~~~v~~G~~v~l~C~~~-g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~ 436 (1075)
.+.+.+|+.+.|.|... +.|.+.|+|+|+|..+..+.++.+..++....|.|.+++.+|+|.|+|.|.|..|... +..
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~ 88 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYL 88 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEE
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEE
Confidence 46788999999999884 5788999999999999988899998889888999999999999999999999988554 566
Q ss_pred EEeecCCCC-------CCCeee-eec-ceEEecCCeEEEEEEEE-CCCCCeEEEEeCCEeccCCC-----------EEEE
Q psy16863 437 LSVLVPKAY-------KAPFFT-KEL-EAILTEQGTVSLECKVM-GIPTPQLIWYKDNKKIKAGD-----------IFAL 495 (1075)
Q Consensus 437 l~V~~~~~~-------~~p~~~-~~~-~~~~~~g~~v~l~C~~~-g~p~~~v~W~~~g~~l~~~~-----------~~~l 495 (1075)
+.|...... .+|.+. ... ...+.+|+.+.|.|.+. +.|.+.++|+++|.++..+. ...|
T Consensus 89 l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L 168 (312)
T 2y23_A 89 IDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEM 168 (312)
T ss_dssp ECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEE
T ss_pred EEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEE
Confidence 666421000 011222 222 34588999999999999 89999999999999987644 2349
Q ss_pred EeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCC--CCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEE
Q psy16863 496 TANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDN--DDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQ 573 (1075)
Q Consensus 496 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~ 573 (1075)
.|..+..+|+|.|+|.|.|..+.. ...+.+.+....... ......... ...+|.+...+. ..+.+|+.+.|.|.
T Consensus 169 ~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~-~~v~~G~~~~l~C~ 244 (312)
T 2y23_A 169 FMEKLQDEDEGTYTFQLQDGKATN--HSTVVLVGDVFKKLQKEAEFQRQEWI-RKQGPHFVEYLS-WEVTGECNVLLKCK 244 (312)
T ss_dssp EESCCCGGGCEEEEEEEESSSCEE--EEEEEECTHHHHHHHHHHHHHHHHHH-HHHSSEEEEEEE-EEEETTTEEEEEEE
T ss_pred EEccCCcccCEeEEEEEEeCCceE--EEEEEEcchhhhhhcccccccccchh-hccCCceeecce-EEEeCCCEEEEEEE
Confidence 999999999999999998754433 333443211000000 000000000 012355554433 78899999999999
Q ss_pred EecCCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceee
Q psy16863 574 VLVPPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQF 636 (1075)
Q Consensus 574 ~~~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 636 (1075)
+.+.|.|..+.|++++..+..+.++.+. . +...|.|.+++.+|+|.|+|.|.|..|....
T Consensus 245 ~~~~p~~~~v~W~~~g~~~~~~~~~~~~-~--~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~ 304 (312)
T 2y23_A 245 VANIKKETHIVWYKDEREISVDEKHDFK-D--GICTLLITEFSKKDAGIYEVILKDDRGKDKS 304 (312)
T ss_dssp EESCCSSCEEEEEETTEEEEEECCC-------CEEEEEECSCSGGGCEEEEEEEESTTCCEEE
T ss_pred EcCCCCCCEEEEeeCCEECCCCCcEEEE-C--CEEEEEECcCCHHHCEEEEEEEEcCCCceee
Confidence 9999877689999999999877776655 2 2469999999999999999999999998763
No 56
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.96 E-value=1.6e-28 Score=270.12 Aligned_cols=273 Identities=14% Similarity=0.237 Sum_probs=208.9
Q ss_pred eeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCCceeccCcEEEEecCCeEEEEEceeccCCCeEEEEEEEcC
Q psy16863 144 DIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFGNRFRAINRDGRTELNIRRVRRDDGGRYSVTASNE 223 (1075)
Q Consensus 144 ~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 223 (1075)
.+.|.+|+.++|.|+... +.|.+.+.|++++..+....++.+...++...|.|.+++.+|+|.|+|.|.|.
T Consensus 10 ~~~v~eg~~v~l~~~~~~---------~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~ 80 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDK---------MTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDT 80 (312)
T ss_dssp EEEECTTCCEEEEEECSS---------CCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSS
T ss_pred eEEEecCCeEEEEEEEeC---------CCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeC
Confidence 456889999999887652 45778999999998777788888888888889999999999999999999999
Q ss_pred ceeEEEEEEEeeeccC--C------CCCccccccc-cceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCccc
Q psy16863 224 SGYSTAKFELSVESQV--P------DAPAFIRRLH-DIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPI 294 (1075)
Q Consensus 224 ~g~~~~~~~l~V~~~~--~------~~p~~~~~~~-~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~~ 294 (1075)
.|... ++.+.|.... . .+|.+..... ...+.+|+.+.|.|.+.. +.+.+.+.|++++..+.
T Consensus 81 ~g~~~-s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~---------~~p~~~v~W~~~~~~i~ 150 (312)
T 2y23_A 81 DGIAS-SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEK---------LSGNAKVNYIFNEKEIF 150 (312)
T ss_dssp CCCCE-EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESC---------CCSSCEEEEEETTEEEC
T ss_pred CCcEE-EEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEe---------CCCCCEEEEEECCEECe
Confidence 88554 5666664100 0 0344444333 788899999999887762 23567788888877666
Q ss_pred cCCCeEEEee--CCeEEEEEcccCCCCCEEEEEEEEeCCeeEEEEEEEEEec-----------------CCCCCCeeeee
Q psy16863 295 FGNRFRAINR--DGRTELNIRRVRRDDGGRYSVTASNESGYSTAKFELSVES-----------------QVPDAPAFIRR 355 (1075)
Q Consensus 295 ~~~~~~~~~~--~~~~~L~I~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-----------------~~~~~p~~~~~ 355 (1075)
.+.++.+... ++..+|.|.+++.+|+|.|+|.|.|..+..... +.+.. ....+|.|...
T Consensus 151 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 228 (312)
T 2y23_A 151 EGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHST--VVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY 228 (312)
T ss_dssp SSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEE--EEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE
T ss_pred eCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEE--EEEcchhhhhhcccccccccchhhccCCceeec
Confidence 6777777654 566789999999999999999998865544333 33310 00134777655
Q ss_pred cCceeeccCCeEEEEEEEecCCCc-EEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeE
Q psy16863 356 LHDIAVKVGTRARLLVEIRSPTEI-KIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCS 434 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~p~~-~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s 434 (1075)
+. ..+.+|+.+.|.|.+.+.|.+ .|+|+|+|..+..+.++.+. +....|.|.+++.+|+|.|+|.|.|..|....+
T Consensus 229 ~~-~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~ 305 (312)
T 2y23_A 229 LS-WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSR 305 (312)
T ss_dssp EE-EEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEE
T ss_pred ce-EEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCHHHCEEEEEEEEcCCCceeee
Confidence 44 788999999999999998887 99999999999866665554 445689999999999999999999999999988
Q ss_pred EEEEee
Q psy16863 435 CELSVL 440 (1075)
Q Consensus 435 ~~l~V~ 440 (1075)
+.|.|.
T Consensus 306 ~~l~i~ 311 (312)
T 2y23_A 306 LKLVDE 311 (312)
T ss_dssp EEECSC
T ss_pred eEEEec
Confidence 888764
No 57
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.1e-28 Score=268.20 Aligned_cols=268 Identities=15% Similarity=0.203 Sum_probs=201.9
Q ss_pred CCcccceeecceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCCceeccCcEEEEecCCeEEEEEceeccCC
Q psy16863 133 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFGNRFRAINRDGRTELNIRRVRRDD 212 (1075)
Q Consensus 133 ~~~p~~~~~~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 212 (1075)
+.+|.|...+.+..+.+|++++|.|.+.+ .+.|++++..+ .. ....+ ..|.|.+++.+|
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~~--------------~i~W~~~~~~~----~~--~~~~~-~~L~i~~~~~~d 68 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD--------------FVRWTFKTYFN----EM--VENKK-NEWIQEKAEATR 68 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECTT--------------EEEEEEECSSS----CE--EEECS-SEEEETTCCGGG
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCCC--------------cEEEecCCcce----ee--ecCCC-ceEEEeccCHHh
Confidence 34677777788889999999999888754 67899988765 11 12222 589999999999
Q ss_pred CeEEEEEEEcCceeEEEEEEEeeeccCCCCCccccccccceeeccceeEEEEEecCCCceEEEEecCCC-eeeEEecCCC
Q psy16863 213 GGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNT-IPFSFRAQGD 291 (1075)
Q Consensus 213 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~-~~~~w~~~~~ 291 (1075)
+|.|+|.|.| |. +..+.|.|.. +|.+...+.+..+.+|+.+.|.|.+.+ +. +.+.|++.++
T Consensus 69 ~G~Y~C~~~n--g~-~~~~~l~V~~----~~~~~~~~~~~~~~~g~~v~l~C~~~~-----------p~~~~v~W~~~~g 130 (290)
T 2o26_X 69 TGTYTCSNSN--GL-TSSIYVFVRD----PAKLFLVGLPLFGKEDSDALVRCPLTD-----------PQVSQYSLIECDG 130 (290)
T ss_dssp CEEEEEEESS--SC-EEEEEEEEEC----SSCCBCCCCCEEEETTSCEEECCCBSC-----------CSCEEEEEEETTS
T ss_pred CeEEEEEeeC--Cc-cEEEEEEEeC----CCcccccccceEEecCCeEEEeCcCCC-----------CCCceEEEEeCCC
Confidence 9999999999 54 6677777763 333335667788899999999887653 34 6788976666
Q ss_pred cccc-CCCeEEEeeCCeEEEEEcccCCCCCE-EEEEEEEeCCeeE-EEEEEEEEecCCCCCCeeeeecCceeeccCCeEE
Q psy16863 292 HPIF-GNRFRAINRDGRTELNIRRVRRDDGG-RYSVTASNESGYS-TAKFELSVESQVPDAPAFIRRLHDIAVKVGTRAR 368 (1075)
Q Consensus 292 ~~~~-~~~~~~~~~~~~~~L~I~~~~~~d~G-~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~ 368 (1075)
..+. +.++..... ..|.|.+++.+|+| .|+|.|.|..+.. +..+.|.|......+|.+...+....+.+|+.++
T Consensus 131 ~~l~~~~~~~~~~~---~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~ 207 (290)
T 2o26_X 131 KSLPTDLTFVPNPK---AGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFT 207 (290)
T ss_dssp CCCCTTCEEEEETT---TEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEE
T ss_pred cCCCCCCceeeCCC---CCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEE
Confidence 6665 444433322 27999999999999 9999999986653 3457788875455688888777778999999999
Q ss_pred EEEEEecCCCcE-EEEEECCEec----CCCCcEEEE---EcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEee
Q psy16863 369 LLVEIRSPTEIK-IHWYRNDRKL----EENKIYRTQ---HDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVL 440 (1075)
Q Consensus 369 l~C~~~g~p~~~-v~W~k~g~~l----~~~~~~~~~---~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~ 440 (1075)
|.|.+.|.|.+. |+|+|+|..+ ......... .......|.|.+++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 208 l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 287 (290)
T 2o26_X 208 VVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVV 287 (290)
T ss_dssp EEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC-
T ss_pred EEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEE
Confidence 999999998885 9999999873 333222222 12234579999999999999999999999999888888876
Q ss_pred cC
Q psy16863 441 VP 442 (1075)
Q Consensus 441 ~~ 442 (1075)
.+
T Consensus 288 ~~ 289 (290)
T 2o26_X 288 EK 289 (290)
T ss_dssp --
T ss_pred eC
Confidence 54
No 58
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.96 E-value=3.2e-31 Score=305.93 Aligned_cols=352 Identities=11% Similarity=0.163 Sum_probs=224.1
Q ss_pred cceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCC--Cce-----------------eccCcEEEEec--CCe
Q psy16863 142 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQG--DHP-----------------IFGNRFRAINR--DGR 200 (1075)
Q Consensus 142 ~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~--~~~-----------------~~~~~~~~~~~--~~~ 200 (1075)
+..+.+.+|++++|.|.+.+.. .+.+.+.|++++ ..+ ...+|+.+... ++.
T Consensus 6 ~~~~~v~~G~~v~L~C~~~~~~--------~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 77 (434)
T 1igy_B 6 SGAELARPGASVKMSCKASGYT--------FTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNT 77 (434)
T ss_dssp CCCCEECTBCCEEECCEECSSC--------GGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCB
T ss_pred CCCeEecCCCCEEEEEEccCCc--------ccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCE
Confidence 3456788999999999887532 023567787753 111 01346655432 345
Q ss_pred EEEEEceeccCCCeEEEEEEEcCceeEEEEEEEeeeccCCCCCccccccccceeeccceeEEEEEecCCCceEEEEecCC
Q psy16863 201 TELNIRRVRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNN 280 (1075)
Q Consensus 201 ~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~ 280 (1075)
..|.|.+++.+|+|.|+|.|.|..+.....+.|.|....+.+|.+........+.+|+.++|.|.+.+. .+
T Consensus 78 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~---------~P 148 (434)
T 1igy_B 78 ANIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGY---------FP 148 (434)
T ss_dssp BCEEECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEE---------BS
T ss_pred EEEEECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeee---------cC
Confidence 689999999999999999999965544455677776433344544433334456799999998887642 12
Q ss_pred C-eeeEEecCCCcccc--------CCCeEEEeeCCeEEEEEcccCCCCCEEEEEEEEeCCeeEEEEEEEEEecC------
Q psy16863 281 T-IPFSFRAQGDHPIF--------GNRFRAINRDGRTELNIRRVRRDDGGRYSVTASNESGYSTAKFELSVESQ------ 345 (1075)
Q Consensus 281 ~-~~~~w~~~~~~~~~--------~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~------ 345 (1075)
. +.+.|++++..... ...+.. ...|+|.++..+| |.|+|.|.|..|.......+.+...
T Consensus 149 ~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~ 222 (434)
T 1igy_B 149 EPVTVTWNSGSLSSGVHTFPAVLQSDLYTL-----SSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCI 222 (434)
T ss_dssp SCCEEEETTTTBCSSEEECCCEECSSCEEE-----EEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCC
T ss_pred CCeEEEEeeCCcCCCeEecCceecCCcEEE-----EEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCcccc
Confidence 2 36788776643110 111111 1369999999989 9999999998886444444433200
Q ss_pred --CCC-CCeeeeecCcee-eccCCeEEEEEEEecCC----CcEEEEEECCEecCCCCcEEE--EEcC---CEEEEEEccc
Q psy16863 346 --VPD-APAFIRRLHDIA-VKVGTRARLLVEIRSPT----EIKIHWYRNDRKLEENKIYRT--QHDG---NFYFIDLSSV 412 (1075)
Q Consensus 346 --~~~-~p~~~~~~~~~~-v~~G~~v~l~C~~~g~p----~~~v~W~k~g~~l~~~~~~~~--~~~g---~~~~L~I~~v 412 (1075)
... |..++.++.... +.+|+.++|.|.+.|.+ .+.|+|+|+|..+........ ..++ ....|.|.++
T Consensus 223 ~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 302 (434)
T 1igy_B 223 CTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQ 302 (434)
T ss_dssp CCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHH
T ss_pred CCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHH
Confidence 011 233343333222 88999999999998873 468999999987754321111 1122 1235889999
Q ss_pred CCCCceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeec-ceEEecCCeEEEEEEEECC-CCC-eEEEEeCCEeccC
Q psy16863 413 SLFDSGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKEL-EAILTEQGTVSLECKVMGI-PTP-QLIWYKDNKKIKA 489 (1075)
Q Consensus 413 ~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~v~l~C~~~g~-p~~-~v~W~~~g~~l~~ 489 (1075)
..+|+|.|+|.|.|..|.......+.+... ...+|.+.... .....+|+.+.|.|.+.|. |++ .|+|+|||+++..
T Consensus 303 ~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~-~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 381 (434)
T 1igy_B 303 DWLNGKEFKCRVNSAAFPAPIEKTISKTKG-KPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPEN 381 (434)
T ss_dssp HHHHTCCCBCCBCCSSCSSCCCCCCCCCCS-CCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSC
T ss_pred HccCCCcEEEEEECCCCCCceeEEEeccCC-CCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCC
Confidence 999999999999999887533333322111 11233333222 1123357789999999985 433 8999999998743
Q ss_pred C----------CEE----EEEeCCCCCCCcEEEEEEEEecce
Q psy16863 490 G----------DIF----ALTANPKDPSSLGTYTCEAVNCMG 517 (1075)
Q Consensus 490 ~----------~~~----~l~i~~~~~~d~G~Y~C~a~n~~g 517 (1075)
. ..+ .|.+...+.+|+|.|+|.|.|...
T Consensus 382 ~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 423 (434)
T 1igy_B 382 YKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 423 (434)
T ss_dssp CEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTS
T ss_pred ceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCC
Confidence 2 111 355555556678999999999754
No 59
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.96 E-value=1.7e-29 Score=278.24 Aligned_cols=247 Identities=15% Similarity=0.228 Sum_probs=190.3
Q ss_pred eeecCCeEEEEEEEecCC-CCeEEEEECCEEcC----CCC-------eEEEe--ecCCCceEEEEEEecCceEEEEEEEE
Q psy16863 661 VMTDDGLVSFECKVVGFP-TPTLQWFKDNEELK----PGD-------VYQLT--GTSSLGSYCCVAKNVMGKAESSTQLT 726 (1075)
Q Consensus 661 ~~~~g~~~~l~C~v~g~p-~p~v~W~k~g~~l~----~~~-------~~~~~--~~~d~G~Y~C~a~N~~g~~~~~~~l~ 726 (1075)
.+.+|+.+.|.|.+.+.| .+.++|+|+|..+. .+. .+.+. ..+|+|.|+|.|.|..|.......+.
T Consensus 16 ~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~ 95 (315)
T 1itb_B 16 VSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 95 (315)
T ss_dssp EEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEECCCE
T ss_pred EEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEEEEEE
Confidence 567899999999999887 78999999986432 122 23332 34799999999999998877766666
Q ss_pred EEeccccCchhhhhhhccCCCCCeEEec---cceeeeecCCeEEEEEEE------ecCCCCeEEEEECCEEeecCCcEEE
Q psy16863 727 IEDIRNHLSEEDKLLLLTNNKAPKFIEG---LKSCQATVNEEFKFTVQV------SISPEPKVSWFRDDQQVVESDNVKI 797 (1075)
Q Consensus 727 V~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~~~~~~~g~~~~l~C~v------~g~p~p~v~W~k~g~~i~~~~~~~~ 797 (1075)
+.. .+|.+... .....+..|+++.|.|.+ .|.|.|.++|+|+|.++..+....
T Consensus 96 v~~-----------------~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~- 157 (315)
T 1itb_B 96 FVE-----------------NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF- 157 (315)
T ss_dssp EEC-----------------CCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSE-
T ss_pred EeC-----------------CCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceE-
Confidence 543 34444322 223568899999999998 889999999999999996543322
Q ss_pred EEeeCcEEEEEEccccCCCCeEEEEEEE-eCCceEE---EEEEEEEEecCCCCCCeeeeecce--eecCCCeEEEEEEEE
Q psy16863 798 LKETLGVCHLKIHALEVADQAEWKCIAT-NDFGQSI---TSCFLKLNVPKHYKKPKFLEELKA--VLSEGGAVNLECKVI 871 (1075)
Q Consensus 798 ~~~~~~~~~L~I~~~~~~D~G~Y~C~A~-N~~G~~~---~s~~l~V~~~~~~~~p~~~~~~~~--~~~~g~~~~L~C~v~ 871 (1075)
.. ..+ .|.|.+++.+|+|.|+|.|. |..|... ....+.+..+....+|.+...+.. .+.+|+.++|.|.+.
T Consensus 158 ~~-~~~--~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~ 234 (315)
T 1itb_B 158 SG-VKD--RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVT 234 (315)
T ss_dssp EE-ETT--EEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEE
T ss_pred ee-cCc--eEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEe
Confidence 22 222 79999999999999999999 8989873 344444554444456777655542 477999999999999
Q ss_pred ccCCCeeEEEECCEEcCCCCe---------------------eEEEECCCCcee-eEEEEEEEEeCCeeEEEEEEEEEe
Q psy16863 872 GVPQPTLKWFKDGRELKAGDI---------------------HKIISGEDGTCC-LGIYTCEAHNCMGTTSSSAALLGF 928 (1075)
Q Consensus 872 g~p~p~v~W~k~g~~l~~~~~---------------------~~i~~~~~~~~d-~G~Y~C~a~N~~G~~~~~~~l~v~ 928 (1075)
|.|.|.|+|+|||.++..+.. ..|.+......| +|.|+|.|.|.+|..++++.|.|.
T Consensus 235 g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 235 GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp ECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred cCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 999999999999999986541 256777788889 999999999999999999988874
No 60
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.8e-28 Score=263.81 Aligned_cols=258 Identities=17% Similarity=0.180 Sum_probs=194.0
Q ss_pred CCCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEE
Q psy16863 549 PAPIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVAT 628 (1075)
Q Consensus 549 ~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 628 (1075)
.+|.+...+....+.+|+.++|.|.+.+ .+.|++++..+ +.....+ ..|.|.+++.+|+|.|+|.|.
T Consensus 11 ~~P~i~~~~~~~~v~~G~~v~l~C~~~~-----~i~W~~~~~~~-----~~~~~~~---~~L~i~~~~~~d~G~Y~C~~~ 77 (290)
T 2o26_X 11 SPPSIHPAQSELIVEAGDTLSLTCIDPD-----FVRWTFKTYFN-----EMVENKK---NEWIQEKAEATRTGTYTCSNS 77 (290)
T ss_dssp -CCEESSCSSEEEEETTSCEEEEEECTT-----EEEEEEECSSS-----CEEEECS---SEEEETTCCGGGCEEEEEEES
T ss_pred CCCEEeCCCCeEEEcCCCcEEEEECCCC-----cEEEecCCcce-----eeecCCC---ceEEEeccCHHhCeEEEEEee
Confidence 4677777788889999999999999876 69999998866 1122222 489999999999999999999
Q ss_pred CCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEEecCCC-CeEEEE-ECCEEcCCCCeEEEe------
Q psy16863 629 SSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKVVGFPT-PTLQWF-KDNEELKPGDVYQLT------ 700 (1075)
Q Consensus 629 n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v~g~p~-p~v~W~-k~g~~l~~~~~~~~~------ 700 (1075)
| |. .....+.|..++... .......+.+|+.+.|.|.+.+ |. +.++|+ ++|..+..+.++.+.
T Consensus 78 n--g~--~~~~~l~V~~~~~~~----~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~ 148 (290)
T 2o26_X 78 N--GL--TSSIYVFVRDPAKLF----LVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKAGIT 148 (290)
T ss_dssp S--SC--EEEEEEEEECSSCCB----CCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTTEEE
T ss_pred C--Cc--cEEEEEEEeCCCccc----ccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCCCEE
Confidence 9 54 344667777654321 2222334668999999999986 77 899995 688887665554432
Q ss_pred ----ecCCCc-eEEEEEEecCceEEE-EEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEec
Q psy16863 701 ----GTSSLG-SYCCVAKNVMGKAES-STQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSI 774 (1075)
Q Consensus 701 ----~~~d~G-~Y~C~a~N~~g~~~~-~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g 774 (1075)
..+|.| .|+|.|.|..|...+ .+.|.|.... ..+|.|...+....+..|+.+.|.|.+.|
T Consensus 149 i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~--------------~~~P~i~~~~~~~~v~~G~~v~l~C~~~g 214 (290)
T 2o26_X 149 IKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAI--------------KAIPVVSVPETSHLLKKGDTFTVVCTIKD 214 (290)
T ss_dssp EESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCC--------------CSCCEEECSCSBCCCCTTCCEEEEEEEEE
T ss_pred EecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCC--------------CCCCccccCCCcceEecCCcEEEEEEEec
Confidence 237899 999999998665443 4777776311 25888887777778999999999999999
Q ss_pred CCCCe-EEEEECCEEe----ecCCcEEEEE--eeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEec
Q psy16863 775 SPEPK-VSWFRDDQQV----VESDNVKILK--ETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVP 842 (1075)
Q Consensus 775 ~p~p~-v~W~k~g~~i----~~~~~~~~~~--~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~ 842 (1075)
.|.|. ++|+|+|..+ .......+.. .......|.|.+++.+|+|.|+|.|.|.+|....++.|.|..+
T Consensus 215 ~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 289 (290)
T 2o26_X 215 VSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEK 289 (290)
T ss_dssp SSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC---
T ss_pred CCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeC
Confidence 99996 9999999873 3333322221 1122458999999999999999999999999988888888754
No 61
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.96 E-value=5.1e-28 Score=258.73 Aligned_cols=232 Identities=20% Similarity=0.269 Sum_probs=178.9
Q ss_pred eeecCCeEEEEEEEec-CCCC--eEEEEECCEEcCC-----CCeEEEeec-----CCCce--EEEEEEecCceEEEEEEE
Q psy16863 661 VMTDDGLVSFECKVVG-FPTP--TLQWFKDNEELKP-----GDVYQLTGT-----SSLGS--YCCVAKNVMGKAESSTQL 725 (1075)
Q Consensus 661 ~~~~g~~~~l~C~v~g-~p~p--~v~W~k~g~~l~~-----~~~~~~~~~-----~d~G~--Y~C~a~N~~g~~~~~~~l 725 (1075)
.+.+|+.++|.|.+.| .|.| .++|+|+|..+.. +..+.+... .|.|. |+|.|.|..|....++.|
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l 93 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTV 93 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCCEEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEE
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCceEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEEEE
Confidence 6778999999999998 7877 9999999998753 334444332 67774 999999999998888999
Q ss_pred EEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEE
Q psy16863 726 TIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVC 805 (1075)
Q Consensus 726 ~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~ 805 (1075)
.|... .+|.+. +....+.+|+.+.|.|.+. |.|.++| +|.++.... ...
T Consensus 94 ~V~~~----------------p~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~---------~~~ 142 (265)
T 2oz4_A 94 TIYSF----------------PAPNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG---------PRA 142 (265)
T ss_dssp EEECC----------------CCCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCS---------SEE
T ss_pred EEeCC----------------CCceee--cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCC---------CcE
Confidence 98742 134444 3456688999999999998 9999999 888774322 235
Q ss_pred EEEEccccCCCCeEEEEEEEeCC-ceEE---EEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEE
Q psy16863 806 HLKIHALEVADQAEWKCIATNDF-GQSI---TSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWF 881 (1075)
Q Consensus 806 ~L~I~~~~~~D~G~Y~C~A~N~~-G~~~---~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~ 881 (1075)
.|.|..+..+|+|.|+|.|.|.. |... .++.|.|..+|.+.... .+....+.+|+.++|.|.+.|.|.|.++|+
T Consensus 143 ~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~--~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~ 220 (265)
T 2oz4_A 143 QLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERD--CPGNWTWPENSQQTPMCQAWGNPLPELKCL 220 (265)
T ss_dssp CCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGG--SCSEEEEETTCEECCCCCCEEESCCEEEEE
T ss_pred EEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCcccccc--CCCccEEcCCCeEEEEeECccCCCCeEEEE
Confidence 78999999999999999998644 7765 67788888766542211 111234778999999999999999999999
Q ss_pred ECCEEcCCCCeeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEec
Q psy16863 882 KDGRELKAGDIHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFE 929 (1075)
Q Consensus 882 k~g~~l~~~~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 929 (1075)
|+|..+....... . ....|+|.|+|.|.|.+|.++.++.|.|..
T Consensus 221 ~~~~~~~~~g~~~--~--v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 221 KDGTFPLPIGESV--T--VTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp ETTTEECCTTSCE--E--CCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ECCcccCCCCcEE--E--eehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 9997443332221 1 445789999999999999999999998864
No 62
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.96 E-value=1.5e-28 Score=271.86 Aligned_cols=244 Identities=13% Similarity=0.196 Sum_probs=185.1
Q ss_pred eeecCCeEEEEEEEecC---------CCCeEEEEECCEEcCC------CCeEEEe--ecCCCc-eEEEEEEecCceEEEE
Q psy16863 661 VMTDDGLVSFECKVVGF---------PTPTLQWFKDNEELKP------GDVYQLT--GTSSLG-SYCCVAKNVMGKAESS 722 (1075)
Q Consensus 661 ~~~~g~~~~l~C~v~g~---------p~p~v~W~k~g~~l~~------~~~~~~~--~~~d~G-~Y~C~a~N~~g~~~~~ 722 (1075)
++.+|+.+.|.|.+.+. |.+.++|+|++..+.. +..+.+. ..+|+| .|+|.|.|..|.....
T Consensus 40 ~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~ 119 (329)
T 3oq3_B 40 MAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQG 119 (329)
T ss_dssp EECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTTSCEEEE
T ss_pred EEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCCCceeeE
Confidence 46789999999999884 5579999999876543 2344443 346999 9999999999875554
Q ss_pred EEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCC-CCeEEEEECCEEeec-CCcEEEEEe
Q psy16863 723 TQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISP-EPKVSWFRDDQQVVE-SDNVKILKE 800 (1075)
Q Consensus 723 ~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p-~p~v~W~k~g~~i~~-~~~~~~~~~ 800 (1075)
..+.|.. .+|.+........+.+|+.+.|.|.+.|.| .|.++|+|+|..+.. ..++...
T Consensus 120 ~~~~v~~-----------------~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~-- 180 (329)
T 3oq3_B 120 IVRSHIR-----------------KPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS-- 180 (329)
T ss_dssp EEEEEEC-----------------CCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE--
T ss_pred EEEEEEc-----------------CCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC--
Confidence 4334432 355555544445577899999999999999 999999999999863 3344432
Q ss_pred eCcEEEEEEccccCCCCeEEEEEEEeC--CceEEEE----EEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccC
Q psy16863 801 TLGVCHLKIHALEVADQAEWKCIATND--FGQSITS----CFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVP 874 (1075)
Q Consensus 801 ~~~~~~L~I~~~~~~D~G~Y~C~A~N~--~G~~~~s----~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p 874 (1075)
. ..|.|.+++.+|+|.|+|.|.|. .|..... +.|.|..++....|.+ .+....+.+|+.++|.|.+.|.|
T Consensus 181 -~--~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~g~p 256 (329)
T 3oq3_B 181 -G--QNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGEPANITCTAVSTS 256 (329)
T ss_dssp -T--TEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEEEEETT
T ss_pred -C--CEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEEEEECC
Confidence 2 37999999999999999999997 6654333 6677776553333333 33334578999999999999998
Q ss_pred ---CC-eeEEEECCEEc-CCCC-------------eeEEEECCCCceeeE-EEEEEEEeCCeeEEEEEEEEE
Q psy16863 875 ---QP-TLKWFKDGREL-KAGD-------------IHKIISGEDGTCCLG-IYTCEAHNCMGTTSSSAALLG 927 (1075)
Q Consensus 875 ---~p-~v~W~k~g~~l-~~~~-------------~~~i~~~~~~~~d~G-~Y~C~a~N~~G~~~~~~~l~v 927 (1075)
.| .|+|+|||.++ ..+. ...|.+......|+| .|+|.|.|.+|..+.++.|.|
T Consensus 257 ~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 257 LLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp CCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 67 88999999885 3332 345777888889999 999999999999999888775
No 63
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.96 E-value=1e-27 Score=260.48 Aligned_cols=274 Identities=18% Similarity=0.234 Sum_probs=205.5
Q ss_pred cccceeecceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCCceeccCcEEEEecCCeEEEEEceeccCCCe
Q psy16863 135 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFGNRFRAINRDGRTELNIRRVRRDDGG 214 (1075)
Q Consensus 135 ~p~~~~~~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G 214 (1075)
+|.+...+.+..+.+|++++|.|.+.+ .+.|++++... .......+...|.|.+++.+|+|
T Consensus 4 ~p~i~~~~~~~~v~~G~~v~L~C~~~~--------------~v~W~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G 64 (289)
T 3ejj_X 4 APVIEPSGPELVVEPGETVTLRCVSNG--------------SVEWDGPISPY-----WTLDPESPGSTLTTRNATFKNTG 64 (289)
T ss_dssp CCEEESCSSEEEECTTCCEEEEEECSS--------------CCEEECSCSSS-----SEECCCSSCCEEEESSCCGGGCE
T ss_pred CcEecCCCceEEECCCCCEEEEEEeCC--------------cEEEccCCCce-----EEEeccCCccEEEEeeeccccCE
Confidence 455656667888999999999998754 36888766432 12223344568999999999999
Q ss_pred EEEEEEEcCceeEEEEEEEeeeccCCCCCccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCccc
Q psy16863 215 RYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPI 294 (1075)
Q Consensus 215 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~~ 294 (1075)
.|+|.|.|..|..+..+.|.|.. + +..+...+....+.+|+.+.|.|.+.+.. .+..+.|++.++..+
T Consensus 65 ~Y~C~~~~~~~~~~~~~~l~V~~--~-~~~~~~~~~~~~v~~g~~v~L~C~~~~~~---------~~~~v~W~~~~~~~~ 132 (289)
T 3ejj_X 65 TYRCTELEDPMAGSTTIHLYVKD--P-AHSWNLLAQEVTVVEGQEAVLPCLITDPA---------LKDSVSLMREGGRQV 132 (289)
T ss_dssp EEEEECCC-----CEEEEEEECC--S-SCSEEESCSEEEEETTSCEEECEEESCGG---------GGGSEEEEEGGGEEC
T ss_pred EEEEEEeccCCcceeEEEEEEeC--C-CcceecccceEEEecCCceEeEEEccCCC---------cceEEEEEecCCeec
Confidence 99999999988888888888863 1 12256666888899999999988876432 122388987666665
Q ss_pred c-CCCeEEEeeCCeEEEEEcccCCCCCEEEEEEEE-eCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEE
Q psy16863 295 F-GNRFRAINRDGRTELNIRRVRRDDGGRYSVTAS-NESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVE 372 (1075)
Q Consensus 295 ~-~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~C~a~-n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~ 372 (1075)
. ..++.+...+ .|.|.+++.+|+|.|+|.|. |..+..+..+.|.|......+|.+...+....+.+|+++.|.|.
T Consensus 133 ~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~ 209 (289)
T 3ejj_X 133 LRKTVYFFSPWR---GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCS 209 (289)
T ss_dssp CTTCCEEEETTT---EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEE
T ss_pred CCCccEEECCCC---CEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEE
Confidence 5 5555554332 69999999999999999999 55566777888888865556888888888888899999999999
Q ss_pred Eec-CCCcEEEEEECCEecCCCCcEEEEEc--CCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecC
Q psy16863 373 IRS-PTEIKIHWYRNDRKLEENKIYRTQHD--GNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVP 442 (1075)
Q Consensus 373 ~~g-~p~~~v~W~k~g~~l~~~~~~~~~~~--g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~ 442 (1075)
+.+ .|.+.|.|+|+|..+........... .....|.|.+++.+|+|.|+|.|.|..|....++.|.+...
T Consensus 210 ~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~ 282 (289)
T 3ejj_X 210 ATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVES 282 (289)
T ss_dssp EEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC--
T ss_pred eCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEec
Confidence 988 78999999999998876533222111 11357999999999999999999999999999988877654
No 64
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.96 E-value=1.4e-29 Score=281.48 Aligned_cols=271 Identities=20% Similarity=0.332 Sum_probs=135.3
Q ss_pred eeecCceeeccCCeEEEEEEEecC-CCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCce
Q psy16863 353 IRRLHDIAVKVGTRARLLVEIRSP-TEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRS 431 (1075)
Q Consensus 353 ~~~~~~~~v~~G~~v~l~C~~~g~-p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~ 431 (1075)
+..+.+..+.+|++++|.|.+.+. |.+.|+|+|+|..+..+.++.+. ...|.|.+++.+|+|.|+|.|.|. |..
T Consensus 12 ~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~-~~~ 86 (334)
T 1ry7_B 12 PGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVG----PQRLQVLNASHEDSGAYSCRQRLT-QRV 86 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEec----cceEEEeecccccCEEEEEEEEeC-CeE
Confidence 334778899999999999999876 57899999999998776665542 236899999999999999999999 777
Q ss_pred eeEEEEEeecCCCC-----------------CCCeeeeec-----ceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccC
Q psy16863 432 HCSCELSVLVPKAY-----------------KAPFFTKEL-----EAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKA 489 (1075)
Q Consensus 432 ~~s~~l~V~~~~~~-----------------~~p~~~~~~-----~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~ 489 (1075)
...+.|.|...+.. .+|.+..+. ...+.+|+.+.|.|.+.|.|.+.|.|+|+|..+..
T Consensus 87 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~ 166 (334)
T 1ry7_B 87 LCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRG 166 (334)
T ss_dssp --------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCT
T ss_pred EEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcc
Confidence 77777777654321 133333221 13477899999999999999999999999998865
Q ss_pred CC----------EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeee-eecc
Q psy16863 490 GD----------IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFI-KEVE 558 (1075)
Q Consensus 490 ~~----------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 558 (1075)
.. ...|.|..+...|+|.|+|.|.|..|.....+.|.|..... .+|.+. ..+.
T Consensus 167 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~----------------~~p~~~~~~~~ 230 (334)
T 1ry7_B 167 EHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSP----------------HRPILQAGLPA 230 (334)
T ss_dssp TSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCC----------------SSCBCCTTCSC
T ss_pred cccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCC----------------CCCceEecCCC
Confidence 43 23799999999999999999999999998888888874211 122222 2346
Q ss_pred ceEeecCCeEEEEEEEecCCCCceEEEEe----CCeEEecCCcE--EEEEcC------CceEEEEEeeeeecCCceEEEE
Q psy16863 559 NVKAKIGTSAILECQVLVPPWPRSIYWYN----KEGVVEASDKY--HIMADG------LGGYSIEINYLEAVDDGEWKCV 626 (1075)
Q Consensus 559 ~~~v~~G~~~~L~C~~~~~p~p~~v~W~~----~~~~i~~~~~~--~~~~~~------~~~~~L~i~~~~~~d~G~Y~C~ 626 (1075)
...+.+|+.++|.|.+.+.|.| .+.|++ ++..+...... .+...+ .....|.|.+++.+|+|.|+|.
T Consensus 231 ~~~~~~G~~v~l~C~~~g~p~p-~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 309 (334)
T 1ry7_B 231 NQTAVLGSDVEFHCKVYSDAQP-HIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCL 309 (334)
T ss_dssp CEEEESSCCEEECCCCBCSSCE-EEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEE
T ss_pred ceEEeCCCCEEEEEEEecCCCC-eEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEE
Confidence 6788999999999999999877 899999 56555433321 111111 0123799999999999999999
Q ss_pred EECCCCceeeeeEEEEEeCC
Q psy16863 627 ATSSSGVKQFSAAYVHVLMP 646 (1075)
Q Consensus 627 a~n~~g~~~~~~~~l~v~~p 646 (1075)
|.|..|.... ...|.|...
T Consensus 310 a~N~~G~~~~-~~~l~V~~~ 328 (334)
T 1ry7_B 310 AGNSIGFSHH-SAWLVVLPA 328 (334)
T ss_dssp EEESSCCEEE-EEEEEEECS
T ss_pred EeCCCCeEEE-EEEEEEEEC
Confidence 9999998764 456666543
No 65
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.96 E-value=1.8e-27 Score=254.31 Aligned_cols=251 Identities=17% Similarity=0.210 Sum_probs=196.3
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCCCc-EEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPTEI-KIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~-~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.|.|...+.+..+.+|+.+.|.|.+.+.|.+ .|+|+|+|..+.... ..|.|.+++.+|+|.|+|.|.|.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~~----------~~l~i~~~~~~d~G~Y~C~~~~~ 70 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTST----------PSYRITSASVNDSGEYRCQRGLS 70 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEESSS
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeeccC----------CeEEEecCCcccCeEEEEEEecC
Confidence 3667777788899999999999999888877 999999999886542 24889999999999999999987
Q ss_pred CCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEE-ECCCCCeEEEEeCCEeccCCC-EEEEEeCCCCCCCc
Q psy16863 428 VGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKV-MGIPTPQLIWYKDNKKIKAGD-IFALTANPKDPSSL 505 (1075)
Q Consensus 428 ~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~v~W~~~g~~l~~~~-~~~l~i~~~~~~d~ 505 (1075)
.+.. .+.|.|..++ .........+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.... ...|.|..+..+|+
T Consensus 71 ~~s~--~~~l~v~~~~-----~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~~~~~l~i~~~~~~d~ 143 (262)
T 3rjd_A 71 GRSD--PIQLEIHRGW-----LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHN 143 (262)
T ss_dssp CCCC--CEEEEEECSS-----EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGC
T ss_pred Cccc--cEEEEEeccc-----eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccCCCCeEEEEECChhhC
Confidence 6544 4566666432 3344444557899999999999 677888999999999986533 34689999999999
Q ss_pred EEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCC-Cc---
Q psy16863 506 GTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPW-PR--- 581 (1075)
Q Consensus 506 G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~-p~--- 581 (1075)
|.|+|.|.|..+.......|.|... .++|.+...+ ...+.+|+.++|.|.+.+.|. |.
T Consensus 144 G~Y~C~~~n~~~~~~~~~~l~V~~~-----------------~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~ 205 (262)
T 3rjd_A 144 GTYHCSGMGKHRYTSAGISVTVKEL-----------------FPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQL 205 (262)
T ss_dssp EEEEEEEESSSEEEEECEEEEEECS-----------------SCCCEEEESS-CSSEETTCCEEEEEECCCCCC-----E
T ss_pred EEEEEEEeCCCCccccceEEEeccC-----------------CCCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccE
Confidence 9999999999988888888888731 1244444433 566889999999999999875 32
Q ss_pred eEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEE
Q psy16863 582 SIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHV 643 (1075)
Q Consensus 582 ~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v 643 (1075)
.+.|++++..+... . ....|.|.++..+|+|.|+|.|.|..|.....+..+.+
T Consensus 206 ~~~w~~~~~~~~~~-------~--~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~~~s~~~~l 258 (262)
T 3rjd_A 206 YFSFYMGSKTLRGR-------N--TSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELEL 258 (262)
T ss_dssp EEEEEETTEEEEEE-------E--SCCEEEESSCCGGGCEEEEEEEEETTSSCEEECCCEEE
T ss_pred EEEEEeCCcEeccc-------C--CCceEEEEEechhhCeEEEEEEEcccCceEEecCCeEE
Confidence 47899999877532 1 22489999999999999999999999976444434444
No 66
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.96 E-value=1.5e-27 Score=258.96 Aligned_cols=262 Identities=13% Similarity=0.159 Sum_probs=182.2
Q ss_pred ccceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceee
Q psy16863 557 VENVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQF 636 (1075)
Q Consensus 557 ~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 636 (1075)
.....+.+|+.++|.|.+.+. +.|++++..+. .+.....++.....|.|.+++.+|+|.|+|.|.|..|....
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~-----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 79 (289)
T 3mjg_X 7 GPELVLNVSSTFVLTCSGSAP-----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETD 79 (289)
T ss_dssp CSEEECCTTCCEEEEEEESSC-----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------C
T ss_pred CCeEEEeCCCcEEEEEeccce-----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcC
Confidence 445778899999999998763 99999998763 22222223322468999999999999999999998876332
Q ss_pred eeEEEEEeCCCCcCCCceeeccc---eeeecCCeEEEEEEEecCCCCeEEEEECC--EEcCC--CCeEEEeecCCCceEE
Q psy16863 637 SAAYVHVLMPKNYRKPRFVESLK---AVMTDDGLVSFECKVVGFPTPTLQWFKDN--EELKP--GDVYQLTGTSSLGSYC 709 (1075)
Q Consensus 637 ~~~~l~v~~p~~~~~p~~~~~~~---~~~~~g~~~~l~C~v~g~p~p~v~W~k~g--~~l~~--~~~~~~~~~~d~G~Y~ 709 (1075)
....+.|.+... ..|.+..... ..+.+|+.+.|.|.+. .|.|.++|++++ ..+.. .....+....|+|.|+
T Consensus 80 ~~~~~~v~v~~p-~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~ 157 (289)
T 3mjg_X 80 ERKRLYIFVPDP-TVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPYDHQRGFSGIFEDRSYI 157 (289)
T ss_dssp CCEEEEEECCCT-TCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCEETTTEEEECCCSSEEE
T ss_pred cEEeEEEEEECC-CcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccceeecCCcCeeeeccCcEEE
Confidence 334455544321 1122111111 3467889999999998 688899999864 33221 1111223457999999
Q ss_pred EEEEecCceEEEE-EEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEE
Q psy16863 710 CVAKNVMGKAESS-TQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQ 788 (1075)
Q Consensus 710 C~a~N~~g~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~ 788 (1075)
|.|.|..+...+. +.|.|... .+|.+...+....+.+|+++.|.|.+.|.|.|.++|+|+++.
T Consensus 158 C~a~n~~~~~~s~~~~l~v~~~----------------~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~ 221 (289)
T 3mjg_X 158 CKTTIGDREVDSDAYYVYRLQV----------------SSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKE 221 (289)
T ss_dssp EEEEETTEEEECCCEEEEECCC----------------CCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSS
T ss_pred EEEEeCCceeeeeeEEEEecCC----------------CCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCcc
Confidence 9999987765543 45555421 366666666667799999999999999999999999998765
Q ss_pred eecCCcEEEEEe----eCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEecC
Q psy16863 789 VVESDNVKILKE----TLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 789 i~~~~~~~~~~~----~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~ 843 (1075)
+........... ......|.|.+++.+|+|.|+|.|.|.+|....++.|.|...+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 280 (289)
T 3mjg_X 222 SGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVE 280 (289)
T ss_dssp SSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC
T ss_pred CCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEe
Confidence 433222111111 1135689999999999999999999999999999999998754
No 67
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.95 E-value=3.1e-27 Score=261.43 Aligned_cols=259 Identities=15% Similarity=0.201 Sum_probs=187.4
Q ss_pred eeccceEeecCCeEEEEEEEecCCC--------CceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCc-eEEE
Q psy16863 555 KEVENVKAKIGTSAILECQVLVPPW--------PRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDG-EWKC 625 (1075)
Q Consensus 555 ~~~~~~~v~~G~~~~L~C~~~~~p~--------p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C 625 (1075)
....++.+.+|+.+.|.|.+.+.+. +..+.|++++..+....+. ...+ .|.|.+++.+|+| .|+|
T Consensus 34 ~~~~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~--~~~~----~L~i~~v~~~D~Gs~Y~C 107 (329)
T 3oq3_B 34 GGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR--VKNG----DLWIANYTSNDSHRRYLC 107 (329)
T ss_dssp EEEEEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT--EETT----EEEESSCCGGGGGCCEEE
T ss_pred CCcceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce--eecc----eEEEcCCChHhCCCcEEE
Confidence 3346777999999999999988532 2389999999877654443 2233 8999999999999 9999
Q ss_pred EEECCCCceeeeeEEEEEeCCCCcCCCceeecc-ceeeecCCeEEEEEEEecCC-CCeEEEEECCEEcCC-CCeE-----
Q psy16863 626 VATSSSGVKQFSAAYVHVLMPKNYRKPRFVESL-KAVMTDDGLVSFECKVVGFP-TPTLQWFKDNEELKP-GDVY----- 697 (1075)
Q Consensus 626 ~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~-~~~~~~g~~~~l~C~v~g~p-~p~v~W~k~g~~l~~-~~~~----- 697 (1075)
.|.|..|........+.+..|+ .+.... ...+.+|+.+.|.|.+.|.| .|.++|+|++..+.. +.++
T Consensus 108 ~a~n~~g~~~~~~~~~v~~~~p-----~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~ 182 (329)
T 3oq3_B 108 TVTTKNGDCVQGIVRSHIRKPP-----SCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQ 182 (329)
T ss_dssp EEECTTSCEEEEEEEEEECCCC-----SCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETT
T ss_pred EEEeCCCceeeEEEEEEEcCCC-----cEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCC
Confidence 9999998755433333444342 222211 12245688999999999999 899999999999853 2233
Q ss_pred --EEe--ecCCCceEEEEEEec--CceEEEE----EEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEE
Q psy16863 698 --QLT--GTSSLGSYCCVAKNV--MGKAESS----TQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFK 767 (1075)
Q Consensus 698 --~~~--~~~d~G~Y~C~a~N~--~g~~~~~----~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 767 (1075)
.+. ..+|+|.|+|.|.|. .|..... +.|.|...+.. ..| ++ .+....+..|+.+.
T Consensus 183 ~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~-------------~~~-~~-~~~~~~v~~G~~~~ 247 (329)
T 3oq3_B 183 NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDH-------------RFK-LI-LDPKINVTIGEPAN 247 (329)
T ss_dssp EEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCC-------------CEE-EE-CCSEEEECTTSCEE
T ss_pred EEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCC-------------CCc-ee-cCCeeEEecCCCEE
Confidence 332 237999999999997 6544333 66777642100 002 22 55567899999999
Q ss_pred EEEEEecCC---CC-eEEEEECCEEe-ecCCcEEEEE-eeC--cEEEEEEccccCCCCe-EEEEEEEeCCceEEEEEEEE
Q psy16863 768 FTVQVSISP---EP-KVSWFRDDQQV-VESDNVKILK-ETL--GVCHLKIHALEVADQA-EWKCIATNDFGQSITSCFLK 838 (1075)
Q Consensus 768 l~C~v~g~p---~p-~v~W~k~g~~i-~~~~~~~~~~-~~~--~~~~L~I~~~~~~D~G-~Y~C~A~N~~G~~~~s~~l~ 838 (1075)
|.|.+.|.| .| .+.|+|+|..+ ..+.+..... ... ....|.|.+++.+|+| .|+|.|.|.+|....++.|.
T Consensus 248 l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~ 327 (329)
T 3oq3_B 248 ITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVV 327 (329)
T ss_dssp EEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEE
T ss_pred EEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEE
Confidence 999999998 77 89999999985 3333332221 111 3568999999999999 99999999999998888776
Q ss_pred E
Q psy16863 839 L 839 (1075)
Q Consensus 839 V 839 (1075)
|
T Consensus 328 v 328 (329)
T 3oq3_B 328 L 328 (329)
T ss_dssp E
T ss_pred e
Confidence 6
No 68
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.95 E-value=4.3e-29 Score=273.96 Aligned_cols=260 Identities=20% Similarity=0.249 Sum_probs=182.8
Q ss_pred ceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEec-----------------CCcEEEEEcCCceEEEEEeeeeecCCc
Q psy16863 559 NVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEA-----------------SDKYHIMADGLGGYSIEINYLEAVDDG 621 (1075)
Q Consensus 559 ~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~-----------------~~~~~~~~~~~~~~~L~i~~~~~~d~G 621 (1075)
++.+.+|++++|.|.+.+.+.+..++|+|++..... ..++.+.....+..+|.|.+++.+|+|
T Consensus 8 ~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 87 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSG 87 (308)
T ss_dssp SCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCE
T ss_pred EeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCE
Confidence 467889999999999876655557999986543211 112222222223457999999999999
Q ss_pred eEEEEEECCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEE-ecCCCCeEEEEECCEEcCCCC-----
Q psy16863 622 EWKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKV-VGFPTPTLQWFKDNEELKPGD----- 695 (1075)
Q Consensus 622 ~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v-~g~p~p~v~W~k~g~~l~~~~----- 695 (1075)
.|+|.|.|..+........+.+..++.. +.+..........++.+.|.|.+ .|.|.|.++|+|++..+....
T Consensus 88 ~Y~C~a~n~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~ 165 (308)
T 4fom_A 88 KYICKAVTFPLGNAQSSTTVTVLVEPTV--SLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPN 165 (308)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEBCCEE--EEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTT
T ss_pred EEEEEEeeCCCcceeeeeEEEeeecccc--ccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeee
Confidence 9999999875444434455666554321 11222222234456789999975 588999999999988775321
Q ss_pred -e------EEEe--ecCCCceEEEEEEecCceEEEE--EEEEEEeccccCchhhhhhhccCCCCCeEEec-cceeeeecC
Q psy16863 696 -V------YQLT--GTSSLGSYCCVAKNVMGKAESS--TQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEG-LKSCQATVN 763 (1075)
Q Consensus 696 -~------~~~~--~~~d~G~Y~C~a~N~~g~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~g 763 (1075)
. +.+. ...|.|.|+|.|.|..|....+ +.|.|. .+|.+... .....+..|
T Consensus 166 ~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~------------------~~P~~~~~~~~~~~~~~g 227 (308)
T 4fom_A 166 ETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQ------------------YAPEVSVTGYDGNWFVGR 227 (308)
T ss_dssp SCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCC------------------EEEEECCBCCCSCEETTC
T ss_pred ecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEe------------------cCCeeEEcccceeeeecc
Confidence 1 2222 2368999999999988775544 444443 35555433 334556778
Q ss_pred CeEEEEEEEecCCCC-eEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEec
Q psy16863 764 EEFKFTVQVSISPEP-KVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVP 842 (1075)
Q Consensus 764 ~~~~l~C~v~g~p~p-~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~ 842 (1075)
+.++|.|.+.|.|.| .++|+|+|..+...... . +...|.|.+++.+|+|.|+|.|.|.+|.+++++.|.|..|
T Consensus 228 ~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~~-----~-~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~ 301 (308)
T 4fom_A 228 KGVNLKCNADANPPPFKSVWSRLDGQWPDGLLA-----S-DNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDP 301 (308)
T ss_dssp CSCEEECCEEEESCEEEEECCBSSSCCCSSCBC-----S-TTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECC
T ss_pred ccEEEEEEEecCCCCcEEEEEECCeECCCcEEE-----c-CCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcC
Confidence 999999999999988 69999999888654321 1 2346789999999999999999999999999999999987
Q ss_pred CC
Q psy16863 843 KH 844 (1075)
Q Consensus 843 ~~ 844 (1075)
|.
T Consensus 302 P~ 303 (308)
T 4fom_A 302 PH 303 (308)
T ss_dssp C-
T ss_pred CC
Confidence 64
No 69
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.95 E-value=4.4e-26 Score=267.29 Aligned_cols=358 Identities=15% Similarity=0.161 Sum_probs=213.9
Q ss_pred ccceEeecCCeEEEEEEEecCCCC---ceEEEEeCC--eE---Ee-------------cCCcEEEEEcC-CceEEEEEee
Q psy16863 557 VENVKAKIGTSAILECQVLVPPWP---RSIYWYNKE--GV---VE-------------ASDKYHIMADG-LGGYSIEINY 614 (1075)
Q Consensus 557 ~~~~~v~~G~~~~L~C~~~~~p~p---~~v~W~~~~--~~---i~-------------~~~~~~~~~~~-~~~~~L~i~~ 614 (1075)
+..+.+.+|+.++|.|.+.+.+.. ..+.||+.. .. +. ...++.+..+. .+.++|+|.+
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 86 (512)
T 1zvo_C 7 SGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRS 86 (512)
T ss_pred CCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECc
Confidence 456778899999999999875431 379999852 21 10 12456655432 2357999999
Q ss_pred eeecCCceEEEEEECCCC----------ce--eeeeEEEEEeCCCCcCCCceee-cc-ceeeecCCeEEEEEEEecC-CC
Q psy16863 615 LEAVDDGEWKCVATSSSG----------VK--QFSAAYVHVLMPKNYRKPRFVE-SL-KAVMTDDGLVSFECKVVGF-PT 679 (1075)
Q Consensus 615 ~~~~d~G~Y~C~a~n~~g----------~~--~~~~~~l~v~~p~~~~~p~~~~-~~-~~~~~~g~~~~l~C~v~g~-p~ 679 (1075)
++.+|+|.|.|.+.+..+ .. ......|.|...+ ..+|.+.. .. ......++.+.|.|.+.|. |.
T Consensus 87 v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~-~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P~ 165 (512)
T 1zvo_C 87 MSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAP-TKAPDVFPIISGCRHPKDNSPVVLACLITGYHPT 165 (512)
T ss_pred CCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccC-CcCCeEEeccCCcccccCCCeEEEEEEEEeeecC
Confidence 999999999999998743 10 1122355565322 12344331 11 1102245789999999987 76
Q ss_pred C-eEEEEECCEEcC---------CCCeEEE------eec-CCCceEEEEEEecCceEEEEE-----------EEEEEecc
Q psy16863 680 P-TLQWFKDNEELK---------PGDVYQL------TGT-SSLGSYCCVAKNVMGKAESST-----------QLTIEDIR 731 (1075)
Q Consensus 680 p-~v~W~k~g~~l~---------~~~~~~~------~~~-~d~G~Y~C~a~N~~g~~~~~~-----------~l~V~~~~ 731 (1075)
| .++|++++.... .+..|.+ ... .+.|.|+|.|.|..|.....+ .+.+...+
T Consensus 166 p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~pp 245 (512)
T 1zvo_C 166 SVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQP 245 (512)
T ss_pred ceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcCCceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCCC
Confidence 5 899999764321 1223322 111 127999999999998766544 22332111
Q ss_pred ccCchh---------------------------hh------h-hhccCCCCCeE-EeccceeeeecCCeEEEEEEEecCC
Q psy16863 732 NHLSEE---------------------------DK------L-LLLTNNKAPKF-IEGLKSCQATVNEEFKFTVQVSISP 776 (1075)
Q Consensus 732 ~~~~~~---------------------------~~------~-~~~~~~~~p~~-~~~~~~~~~~~g~~~~l~C~v~g~p 776 (1075)
.....- .. + .......+|.+ +..+....+..|+.+.|.|.+.|.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~ 325 (512)
T 1zvo_C 246 QAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSD 325 (512)
T ss_pred chhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEeceE
Confidence 000000 00 0 00001234444 4444445567899999999999863
Q ss_pred C--CeEEEEECCEEeecCCc-EEEEEeeCc----EEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEE-ecCCCCCC
Q psy16863 777 E--PKVSWFRDDQQVVESDN-VKILKETLG----VCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLN-VPKHYKKP 848 (1075)
Q Consensus 777 ~--p~v~W~k~g~~i~~~~~-~~~~~~~~~----~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~-~~~~~~~p 848 (1075)
+ ..|+|+|+|+.+..... -......++ ...|.|..+..+|.|.|+|.|.|..+... ...+... ......+|
T Consensus 326 P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~~~~~~~p 404 (512)
T 1zvo_C 326 LKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPAAQAPVKL 404 (512)
T ss_pred CCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecCCCCCCCC
Confidence 3 49999999998652111 011111222 24699999999999999999999988653 3223221 10001234
Q ss_pred eeeeecceeecCCCeEE-EEEEEEccCCC--eeEEEECCEEcCCCCe-------------e----EEEECCCCceeeEEE
Q psy16863 849 KFLEELKAVLSEGGAVN-LECKVIGVPQP--TLKWFKDGRELKAGDI-------------H----KIISGEDGTCCLGIY 908 (1075)
Q Consensus 849 ~~~~~~~~~~~~g~~~~-L~C~v~g~p~p--~v~W~k~g~~l~~~~~-------------~----~i~~~~~~~~d~G~Y 908 (1075)
.+....... .|+.+. |.|.+.|.+++ .|+|+|||.++..+.. + .|.+......|.|.|
T Consensus 405 ~v~~~~~~~--~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~Y 482 (512)
T 1zvo_C 405 SLNLLASSD--PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATY 482 (512)
T ss_pred EEEEEccCc--CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCCCeE
Confidence 432211111 688899 99999996554 5899999999864321 1 112222222358999
Q ss_pred EEEEEeCCee
Q psy16863 909 TCEAHNCMGT 918 (1075)
Q Consensus 909 ~C~a~N~~G~ 918 (1075)
+|.|.|....
T Consensus 483 tC~v~h~~l~ 492 (512)
T 1zvo_C 483 TCVVSHEDSR 492 (512)
T ss_pred EEEEEecCCC
Confidence 9999998754
No 70
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.95 E-value=1.6e-27 Score=263.88 Aligned_cols=268 Identities=17% Similarity=0.198 Sum_probs=182.9
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecC-CCcEEEEEECCEecC---------CCCcEEEEEc-----CCEEEEEEcccC
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSP-TEIKIHWYRNDRKLE---------ENKIYRTQHD-----GNFYFIDLSSVS 413 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~-p~~~v~W~k~g~~l~---------~~~~~~~~~~-----g~~~~L~I~~v~ 413 (1075)
...|...+.++.+.+|+++.|.|.+.+. |.+.|+|||++..+. ...++....+ +....|.|.+++
T Consensus 3 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 82 (327)
T 2wng_A 3 ELQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNIT 82 (327)
T ss_dssp CCCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCC
T ss_pred eeEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCc
Confidence 3456667788999999999999999887 888999999986431 1124333222 334469999999
Q ss_pred CCCceeEEEEEEeCCCce-----eeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCC--eEEEEeCCEe
Q psy16863 414 LFDSGRWTCLAENAVGRS-----HCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTP--QLIWYKDNKK 486 (1075)
Q Consensus 414 ~~d~G~Y~C~a~n~~g~~-----~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~--~v~W~~~g~~ 486 (1075)
.+|+|.|+|.|.|..+.. ...+.|.|..++. +|.+. .+...+.+|+.+.|.|.+.|.|++ .++|+|+|++
T Consensus 83 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~--~p~i~-~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~ 159 (327)
T 2wng_A 83 PADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPS--APVVS-GPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNE 159 (327)
T ss_dssp GGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCC--CCEEE-CCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred cccCeEEEEEeecCCCcceeEeecCcEEEEEEecCC--Cceee-ccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEE
Confidence 999999999999987642 2346777776653 34444 333457889999999999998776 8999999999
Q ss_pred ccCCC----------EE----EEEeCCCCCCCcEEEEEEEEecceee-EEEEEEEEeccccccCCCCCCcCCCCCCCCCC
Q psy16863 487 IKAGD----------IF----ALTANPKDPSSLGTYTCEAVNCMGAA-FSTSRVIARGQQSFLDNDDVPFNSLMPPGPAP 551 (1075)
Q Consensus 487 l~~~~----------~~----~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~ 551 (1075)
+..+. .+ .|.+.....+|+|.|+|.|.|..|.. .......+. +.. ..+|
T Consensus 160 l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~---------------~~v-~~~P 223 (327)
T 2wng_A 160 LSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLS---------------ETI-RVPP 223 (327)
T ss_dssp CCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGG---------------GTB-CBCC
T ss_pred ccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEec---------------ccc-CCCC
Confidence 86432 12 35666666777899999999988763 112222211 001 1234
Q ss_pred eeeeeccceEeecCCeEEEEEEEecCC-CCceEEEEeCCeEEecCCcEEEEEcCCce----EEEEEeeeeecCCceEEEE
Q psy16863 552 IFIKEVENVKAKIGTSAILECQVLVPP-WPRSIYWYNKEGVVEASDKYHIMADGLGG----YSIEINYLEAVDDGEWKCV 626 (1075)
Q Consensus 552 ~~~~~~~~~~v~~G~~~~L~C~~~~~p-~p~~v~W~~~~~~i~~~~~~~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~ 626 (1075)
.+...+.. +.+|+.++|.|.+.+.+ .+..|.|+++|..+.......+..++.+. ..|.|..+..+|+|.|+|.
T Consensus 224 ~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~ 301 (327)
T 2wng_A 224 TLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQ 301 (327)
T ss_dssp EEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEE
T ss_pred EEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEE
Confidence 44443333 78999999999999954 33489999999988654322233333333 3588999999999999999
Q ss_pred EECCCCceeee
Q psy16863 627 ATSSSGVKQFS 637 (1075)
Q Consensus 627 a~n~~g~~~~~ 637 (1075)
|.|..|.....
T Consensus 302 a~N~~~~~~s~ 312 (327)
T 2wng_A 302 VEHDGQPAVSK 312 (327)
T ss_dssp EEETTCCCEEE
T ss_pred EEeCCCCCchh
Confidence 99999876543
No 71
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.95 E-value=4.4e-28 Score=271.16 Aligned_cols=268 Identities=15% Similarity=0.229 Sum_probs=164.3
Q ss_pred ccceEeecCCeEEEEEEEecCCC-----------CceEEEEeCCeE----EecC---CcEEEEEcCCceEEEEEeeeeec
Q psy16863 557 VENVKAKIGTSAILECQVLVPPW-----------PRSIYWYNKEGV----VEAS---DKYHIMADGLGGYSIEINYLEAV 618 (1075)
Q Consensus 557 ~~~~~v~~G~~~~L~C~~~~~p~-----------p~~v~W~~~~~~----i~~~---~~~~~~~~~~~~~~L~i~~~~~~ 618 (1075)
..++.+.+|+.+.|.|.+.+.|. + .+.|++++.. .... ...++...+ ..|.|.+++.+
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~-~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~ 89 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGL-TLIWYWTRQDRDLEEPINFRLPENRISKEK---DVLWFRPTLLN 89 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTC-EEEEEEEESSCCCEEECCCCCGGGCEEEET---TEEEESSCCGG
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCc-eEEEEECCCCCcccccccccccCceEeecC---CEEEEccCChh
Confidence 46678999999999999997653 5 8999998742 1111 122222222 17999999999
Q ss_pred CCceEEEEEECCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEE-----ecCCCCeEEEEECCEEcCC
Q psy16863 619 DDGEWKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKV-----VGFPTPTLQWFKDNEELKP 693 (1075)
Q Consensus 619 d~G~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v-----~g~p~p~v~W~k~g~~l~~ 693 (1075)
|+|.|+|.|.|..|.... ...+.|..++....+.+.......+..|+.+.|.|.+ .|.|.|.++|+|++..+..
T Consensus 90 D~G~Y~C~a~n~~~~~~~-~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~ 168 (349)
T 4dep_C 90 DTGNYTCMLRNTTYCSKV-AFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQN 168 (349)
T ss_dssp GCEEEEEEEECSSCEEEE-EEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCS
T ss_pred hCEEEEEEEecCCceEEE-EEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCC
Confidence 999999999999887653 4567777665433333322223356678899999985 7789999999999999865
Q ss_pred CC-------eEEEe--ecCCCceEEEEEEecC-ceE---EEEEEEEEEeccccCchhhhhhhccCCCCCeEEecccee--
Q psy16863 694 GD-------VYQLT--GTSSLGSYCCVAKNVM-GKA---ESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSC-- 758 (1075)
Q Consensus 694 ~~-------~~~~~--~~~d~G~Y~C~a~N~~-g~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-- 758 (1075)
.. .+.+. ..+|+|.|+|.|.|.. |.. ...+.|.|...+.. ..+|.+.......
T Consensus 169 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~------------~~~p~i~~~~~~~~~ 236 (349)
T 4dep_C 169 FNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKN------------AVPPVIHSPNDHVVY 236 (349)
T ss_dssp CSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGG------------CCSCEEC--------
T ss_pred ccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCC------------CCCCeEecCCCceeE
Confidence 33 34443 3479999999999987 554 45566666532100 1267776665443
Q ss_pred eeecCCeEEEEEEEe----cCCCCeEEEEECCEEeec-CCcEEEEE-------e-eCcEEEEEEccccCCCC-eEEEEEE
Q psy16863 759 QATVNEEFKFTVQVS----ISPEPKVSWFRDDQQVVE-SDNVKILK-------E-TLGVCHLKIHALEVADQ-AEWKCIA 824 (1075)
Q Consensus 759 ~~~~g~~~~l~C~v~----g~p~p~v~W~k~g~~i~~-~~~~~~~~-------~-~~~~~~L~I~~~~~~D~-G~Y~C~A 824 (1075)
.+..|+.+.|.|.+. |.|.|.+.|+|+|..+.. +.++.+.. . ......|.|.+++.+|+ |.|+|.|
T Consensus 237 ~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a 316 (349)
T 4dep_C 237 EKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHA 316 (349)
T ss_dssp --------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEE
T ss_pred EEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEE
Confidence 788999999999999 678999999999998876 33332211 0 01134599999999999 9999999
Q ss_pred EeCCceEEEEEEEEEEe
Q psy16863 825 TNDFGQSITSCFLKLNV 841 (1075)
Q Consensus 825 ~N~~G~~~~s~~l~V~~ 841 (1075)
.|.+|....++.|.|..
T Consensus 317 ~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 317 RSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp ECSSCEEEEECC-----
T ss_pred EcCCCcEEEEEEEeeec
Confidence 99999999998888875
No 72
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.95 E-value=7.8e-28 Score=269.15 Aligned_cols=271 Identities=18% Similarity=0.260 Sum_probs=171.4
Q ss_pred ecCceeeccCCeEEEEEEEecCCC-----------cEEEEEECCEe------cC---CCCcEEEEEcCCEEEEEEcccCC
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSPTE-----------IKIHWYRNDRK------LE---ENKIYRTQHDGNFYFIDLSSVSL 414 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~p~-----------~~v~W~k~g~~------l~---~~~~~~~~~~g~~~~L~I~~v~~ 414 (1075)
.+.++.+.+|+++.|.|.+.+.|. +.|+|+|+|.. +. ...+ +...+. .|.|.+++.
T Consensus 13 ~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~--~~~~~~--~L~i~~~~~ 88 (349)
T 4dep_C 13 TMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENR--ISKEKD--VLWFRPTLL 88 (349)
T ss_dssp CCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGC--EEEETT--EEEESSCCG
T ss_pred eeeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCce--EeecCC--EEEEccCCh
Confidence 356788999999999999987654 89999999842 22 1222 223333 589999999
Q ss_pred CCceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEE-----ECCCCCeEEEEeCCEeccC
Q psy16863 415 FDSGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKV-----MGIPTPQLIWYKDNKKIKA 489 (1075)
Q Consensus 415 ~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~-----~g~p~~~v~W~~~g~~l~~ 489 (1075)
+|+|.|+|.|.|..|....++.|.|..++....+.+..+....+.+|+.+.|.|.+ .|.|.+.|+|+|+|.++..
T Consensus 89 ~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~ 168 (349)
T 4dep_C 89 NDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQN 168 (349)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCS
T ss_pred hhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCC
Confidence 99999999999999988888999998876544443333333457889999999985 7789999999999999976
Q ss_pred CCE-----EEEEeCCCCCCCcEEEEEEEEecc-eee---EEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccce
Q psy16863 490 GDI-----FALTANPKDPSSLGTYTCEAVNCM-GAA---FSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENV 560 (1075)
Q Consensus 490 ~~~-----~~l~i~~~~~~d~G~Y~C~a~n~~-g~~---~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (1075)
... ..|.|..+..+|+|.|+|.|.|.. |.. .....|.|..+... ..+|.+..++...
T Consensus 169 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~--------------~~~p~i~~~~~~~ 234 (349)
T 4dep_C 169 FNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKN--------------AVPPVIHSPNDHV 234 (349)
T ss_dssp CSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGG--------------CCSCEEC------
T ss_pred ccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCC--------------CCCCeEecCCCce
Confidence 332 258899999999999999999987 554 45556666532110 1245554444332
Q ss_pred --EeecCCeEEEEEEEe----cCCCCceEEEEeCCeEEec-CCcEEEEE-------cC-CceEEEEEeeeeecCC-ceEE
Q psy16863 561 --KAKIGTSAILECQVL----VPPWPRSIYWYNKEGVVEA-SDKYHIMA-------DG-LGGYSIEINYLEAVDD-GEWK 624 (1075)
Q Consensus 561 --~v~~G~~~~L~C~~~----~~p~p~~v~W~~~~~~i~~-~~~~~~~~-------~~-~~~~~L~i~~~~~~d~-G~Y~ 624 (1075)
.+.+|+.++|.|.+. +.|.| .+.|++++..+.. ..++.+.. .+ .....|.|.++..+|+ |.|+
T Consensus 235 ~~~v~~G~~v~l~C~~~~~~~g~p~p-~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~ 313 (349)
T 4dep_C 235 VYEKEPGEELLIPCTVYFSFLMDSRN-EVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYV 313 (349)
T ss_dssp ----------CCCEEEEECCCTTCCC-EEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CE
T ss_pred eEEEecCCcEEEEEEEEEccCCCCCC-EEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEE
Confidence 788999999999999 45666 8999999988765 22322211 11 0123599999999999 9999
Q ss_pred EEEECCCCceeeeeEEEEEeC
Q psy16863 625 CVATSSSGVKQFSAAYVHVLM 645 (1075)
Q Consensus 625 C~a~n~~g~~~~~~~~l~v~~ 645 (1075)
|.|.|..|..... ..|.|..
T Consensus 314 C~a~N~~G~~~~~-~~l~v~~ 333 (349)
T 4dep_C 314 CHARSAKGEVAKA-AKVKQKV 333 (349)
T ss_dssp EEEECSSCEEEEE-CC-----
T ss_pred EEEEcCCCcEEEE-EEEeeec
Confidence 9999999987643 4555554
No 73
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.95 E-value=1.5e-27 Score=264.10 Aligned_cols=262 Identities=19% Similarity=0.310 Sum_probs=176.9
Q ss_pred CeeeeeccceEeecCCeEEEEEEEecC-CCCceEEEEeCCeEE----ec-----CCcEEEEEcC----CceEEEEEeeee
Q psy16863 551 PIFIKEVENVKAKIGTSAILECQVLVP-PWPRSIYWYNKEGVV----EA-----SDKYHIMADG----LGGYSIEINYLE 616 (1075)
Q Consensus 551 ~~~~~~~~~~~v~~G~~~~L~C~~~~~-p~p~~v~W~~~~~~i----~~-----~~~~~~~~~~----~~~~~L~i~~~~ 616 (1075)
..+...+.++.+.+|+.++|.|.+.+. |.| .|.|++++... .. ..++....+. .....|.|.+++
T Consensus 4 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~-~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 82 (327)
T 2wng_A 4 LQVIQPDKSVSVAAGESAILHCTVTSLIPVG-PIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNIT 82 (327)
T ss_dssp CCEECCCSEEEEETTSCEEECCEESCCCSCC-CEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCC
T ss_pred eEEEcCCCceEEecCCcEEEEEEccCcCCCc-eEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCc
Confidence 345566778899999999999999987 666 89999987532 11 1133332221 234579999999
Q ss_pred ecCCceEEEEEECCCCcee----eeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEEecCCCC--eEEEEECCEE
Q psy16863 617 AVDDGEWKCVATSSSGVKQ----FSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKVVGFPTP--TLQWFKDNEE 690 (1075)
Q Consensus 617 ~~d~G~Y~C~a~n~~g~~~----~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v~g~p~p--~v~W~k~g~~ 690 (1075)
.+|+|.|+|.|.|..+... .....|.|..++ ..|.+.. ....+.+|+.+.|.|.+.|.|.+ .++|+|+|..
T Consensus 83 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p--~~p~i~~-~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~ 159 (327)
T 2wng_A 83 PADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKP--SAPVVSG-PAARATPQHTVSFTCESHGFSPRDITLKWFKNGNE 159 (327)
T ss_dssp GGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCC--CCCEEEC-CSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred cccCeEEEEEeecCCCcceeEeecCcEEEEEEecC--CCceeec-cccccCCCCEEEEEEEEeCccCCCcEEEEEECCEE
Confidence 9999999999999876421 123466666553 2344432 23346788999999999998765 8999999998
Q ss_pred cCCCC----------eEEEe--------ecCCCceEEEEEEecCceE---EEEEEEEEEeccccCchhhhhhhccCCCCC
Q psy16863 691 LKPGD----------VYQLT--------GTSSLGSYCCVAKNVMGKA---ESSTQLTIEDIRNHLSEEDKLLLLTNNKAP 749 (1075)
Q Consensus 691 l~~~~----------~~~~~--------~~~d~G~Y~C~a~N~~g~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p 749 (1075)
+..+. .|.+. ..+|.|.|+|.|.|..|.. ..++.+.+. ...+|
T Consensus 160 l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~----------------v~~~P 223 (327)
T 2wng_A 160 LSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSET----------------IRVPP 223 (327)
T ss_dssp CCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGT----------------BCBCC
T ss_pred ccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccc----------------cCCCC
Confidence 86432 23321 1235699999999988763 233333211 12577
Q ss_pred eEEeccceeeeecCCeEEEEEEEecCC-CC-eEEEEECCEEeecCCcEEEEEeeCcE----EEEEEccccCCCCeEEEEE
Q psy16863 750 KFIEGLKSCQATVNEEFKFTVQVSISP-EP-KVSWFRDDQQVVESDNVKILKETLGV----CHLKIHALEVADQAEWKCI 823 (1075)
Q Consensus 750 ~~~~~~~~~~~~~g~~~~l~C~v~g~p-~p-~v~W~k~g~~i~~~~~~~~~~~~~~~----~~L~I~~~~~~D~G~Y~C~ 823 (1075)
.+...... +.+|+.+.|.|.+.|.| ++ .|+|+|||+++..+....+....++. ..|.|.++..+|+|.|+|.
T Consensus 224 ~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~ 301 (327)
T 2wng_A 224 TLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQ 301 (327)
T ss_dssp EEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEE
T ss_pred EEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEE
Confidence 77655444 77999999999999954 44 89999999998754322233333332 4699999999999999999
Q ss_pred EEeCCceEEEE
Q psy16863 824 ATNDFGQSITS 834 (1075)
Q Consensus 824 A~N~~G~~~~s 834 (1075)
|.|..|.+.+.
T Consensus 302 a~N~~~~~~s~ 312 (327)
T 2wng_A 302 VEHDGQPAVSK 312 (327)
T ss_dssp EEETTCCCEEE
T ss_pred EEeCCCCCchh
Confidence 99999986543
No 74
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.95 E-value=9.5e-29 Score=275.37 Aligned_cols=269 Identities=17% Similarity=0.256 Sum_probs=208.5
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEe-------cCCCcEEEEEECCEe--cCCCCcEEEEEcCCEEEEEEcccCCCCce
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIR-------SPTEIKIHWYRNDRK--LEENKIYRTQHDGNFYFIDLSSVSLFDSG 418 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~-------g~p~~~v~W~k~g~~--l~~~~~~~~~~~g~~~~L~I~~v~~~d~G 418 (1075)
..|.|...+.+..+.+|+++.|.|.+. +.|.+.|.|+|+|.. +......++...+. .|.|.+++.+|+|
T Consensus 17 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G 94 (339)
T 3o4o_C 17 SCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDG--ALWLLPALQEDSG 94 (339)
T ss_dssp -CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETT--EEEESSBCTTCCE
T ss_pred hhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCC--eEEECCCCcccCE
Confidence 467888888999999999999999997 888999999999987 43332222323333 4899999999999
Q ss_pred eEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEE-----EECCCCCeEEEEeCCEeccCC-C-
Q psy16863 419 RWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECK-----VMGIPTPQLIWYKDNKKIKAG-D- 491 (1075)
Q Consensus 419 ~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~-----~~g~p~~~v~W~~~g~~l~~~-~- 491 (1075)
.|+|.|.|..|....++.|.|..++....+.+.. ...+.+|+.+.|.|. +.|.|.+.+.|+|+|..+... .
T Consensus 95 ~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~--~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~ 172 (339)
T 3o4o_C 95 TYVCTTRNASYCDKMSIELRVFENTDAFLPFISY--PQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEK 172 (339)
T ss_dssp EEECCEEETTEEEEEEEEEEEECSCGGGHHHHCE--EEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSS
T ss_pred EEEEEEECCcceEEEEEEEEEEcCCCcccccccc--ceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCce
Confidence 9999999999988888888888765432222221 125789999999999 788999999999999998654 1
Q ss_pred ------EEEEEeCCCCCCCcEEEEEEEEecce----eeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceE
Q psy16863 492 ------IFALTANPKDPSSLGTYTCEAVNCMG----AAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVK 561 (1075)
Q Consensus 492 ------~~~l~i~~~~~~d~G~Y~C~a~n~~g----~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (1075)
...|.|..+...|+|.|+|.|.|..| .....+.|.|.... ...+|.+...+....
T Consensus 173 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~---------------~~~~P~i~~~~~~~~ 237 (339)
T 3o4o_C 173 FLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKK---------------EETIPVIISPLKTIS 237 (339)
T ss_dssp EEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCC---------------CCCCCEECCCSCCCC
T ss_pred eEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCC---------------CCCCCEEecCCceeE
Confidence 13699999999999999999999887 45667777776321 123566666677778
Q ss_pred eecCCeEEEEEEE---ecCCCCceEEEEeCCeEEe---------cCCcEEEEEcCCceE--EEEEeeeeecCC-ceEEEE
Q psy16863 562 AKIGTSAILECQV---LVPPWPRSIYWYNKEGVVE---------ASDKYHIMADGLGGY--SIEINYLEAVDD-GEWKCV 626 (1075)
Q Consensus 562 v~~G~~~~L~C~~---~~~p~p~~v~W~~~~~~i~---------~~~~~~~~~~~~~~~--~L~i~~~~~~d~-G~Y~C~ 626 (1075)
+.+|+.++|.|.+ .+.|.+..+.|++++..+. ...++.+..++.... .|.|.+++.+|+ |.|+|.
T Consensus 238 v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~ 317 (339)
T 3o4o_C 238 ASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCV 317 (339)
T ss_dssp CCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEE
T ss_pred eccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEE
Confidence 9999999999999 8888444899999887643 333444433443222 699999999997 999999
Q ss_pred EECCCCcee
Q psy16863 627 ATSSSGVKQ 635 (1075)
Q Consensus 627 a~n~~g~~~ 635 (1075)
|.|..|...
T Consensus 318 a~N~~G~~~ 326 (339)
T 3o4o_C 318 VHNTLSFQT 326 (339)
T ss_dssp EEETTEEEC
T ss_pred EEeccCceE
Confidence 999999865
No 75
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.95 E-value=5.3e-27 Score=250.67 Aligned_cols=245 Identities=15% Similarity=0.230 Sum_probs=188.3
Q ss_pred CeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECC
Q psy16863 551 PIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSS 630 (1075)
Q Consensus 551 ~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 630 (1075)
|.+...+....+.+|+.++|.|.+.+.|.+..+.|++++..+... ...|.|.+++.+|+|.|+|.+.|.
T Consensus 2 P~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~-----------~~~l~i~~~~~~d~G~Y~C~~~~~ 70 (262)
T 3rjd_A 2 AVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS-----------TPSYRITSASVNDSGEYRCQRGLS 70 (262)
T ss_dssp CEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC-----------SSEEEESSCCGGGCEEEEEEESSS
T ss_pred CeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc-----------CCeEEEecCCcccCeEEEEEEecC
Confidence 455666777889999999999999988876689999999887543 127999999999999999999987
Q ss_pred CCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEE-ecCCCCeEEEEECCEEcCC---CCeEEEe--ecCC
Q psy16863 631 SGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKV-VGFPTPTLQWFKDNEELKP---GDVYQLT--GTSS 704 (1075)
Q Consensus 631 ~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v-~g~p~p~v~W~k~g~~l~~---~~~~~~~--~~~d 704 (1075)
.+.. ...+.|..+ +.........+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.. +..+.+. ..+|
T Consensus 71 ~~s~---~~~l~v~~~-----~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~~~~~l~i~~~~~~d 142 (262)
T 3rjd_A 71 GRSD---PIQLEIHRG-----WLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISH 142 (262)
T ss_dssp CCCC---CEEEEEECS-----SEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGG
T ss_pred Cccc---cEEEEEecc-----ceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccCCCCeEEEEECChhh
Confidence 7653 345666543 23333334457789999999999 6788889999999998754 3345554 3478
Q ss_pred CceEEEEEEecCceEEEEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCC-Ce----
Q psy16863 705 LGSYCCVAKNVMGKAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPE-PK---- 779 (1075)
Q Consensus 705 ~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~-p~---- 779 (1075)
.|.|+|.|.|..+.....+.|.|.+.. .+|.+.... ...+..|+.+.|.|.+.+.|. |.
T Consensus 143 ~G~Y~C~~~n~~~~~~~~~~l~V~~~~---------------~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~ 206 (262)
T 3rjd_A 143 NGTYHCSGMGKHRYTSAGISVTVKELF---------------PAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLY 206 (262)
T ss_dssp CEEEEEEEESSSEEEEECEEEEEECSS---------------CCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EE
T ss_pred CEEEEEEEeCCCCccccceEEEeccCC---------------CCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEE
Confidence 999999999999888888888887531 255555444 566889999999999999886 53
Q ss_pred EEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceE-EEEEEEEE
Q psy16863 780 VSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQS-ITSCFLKL 839 (1075)
Q Consensus 780 v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~-~~s~~l~V 839 (1075)
+.|+|+|..+... .....|.|.+++.+|+|.|+|.|.|..|.. ..+..+.|
T Consensus 207 ~~w~~~~~~~~~~---------~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~~~s~~~~l 258 (262)
T 3rjd_A 207 FSFYMGSKTLRGR---------NTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELEL 258 (262)
T ss_dssp EEEEETTEEEEEE---------ESCCEEEESSCCGGGCEEEEEEEEETTSSCEEECCCEEE
T ss_pred EEEEeCCcEeccc---------CCCceEEEEEechhhCeEEEEEEEcccCceEEecCCeEE
Confidence 7899999987532 123479999999999999999999999975 33444444
No 76
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.95 E-value=1.4e-28 Score=269.95 Aligned_cols=253 Identities=18% Similarity=0.210 Sum_probs=176.7
Q ss_pred eeecCCeEEEEEEEecC-CCCeEEEEECCEEcC---------------C--------------CCeEEEe--ecCCCceE
Q psy16863 661 VMTDDGLVSFECKVVGF-PTPTLQWFKDNEELK---------------P--------------GDVYQLT--GTSSLGSY 708 (1075)
Q Consensus 661 ~~~~g~~~~l~C~v~g~-p~p~v~W~k~g~~l~---------------~--------------~~~~~~~--~~~d~G~Y 708 (1075)
.+..|+.++|.|.+.+. |.+.|+|+|++.... . +..+.+. ..+|+|.|
T Consensus 10 tv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y 89 (308)
T 4fom_A 10 TAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGKY 89 (308)
T ss_dssp EEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCEEE
T ss_pred EEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCEEE
Confidence 45679999999998754 445799998543210 0 0123333 34799999
Q ss_pred EEEEEec-CceEEEEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEE-ecCCCCeEEEEECC
Q psy16863 709 CCVAKNV-MGKAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQV-SISPEPKVSWFRDD 786 (1075)
Q Consensus 709 ~C~a~N~-~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v-~g~p~p~v~W~k~g 786 (1075)
+|.|.|. .|.....+.+.+... .++.+...+.......|+.+.|.|.+ .|.|.|.|+|+|++
T Consensus 90 ~C~a~n~~~~~~~~~~~~~v~~~----------------~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~ 153 (308)
T 4fom_A 90 ICKAVTFPLGNAQSSTTVTVLVE----------------PTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDL 153 (308)
T ss_dssp EEEEEETTTEEEEEEEEEEEEBC----------------CEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCS
T ss_pred EEEEeeCCCcceeeeeEEEeeec----------------cccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECC
Confidence 9999996 566666777777642 11223334445556678999999985 68999999999999
Q ss_pred EEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEE--EEEEEEEecCCCCCCeeeeecceeecCCCeE
Q psy16863 787 QQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSIT--SCFLKLNVPKHYKKPKFLEELKAVLSEGGAV 864 (1075)
Q Consensus 787 ~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~--s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~ 864 (1075)
.++.................|.|..+..+|+|.|+|.|.|..|.... ++.|.|..+|.+.. .......+..|+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~---~~~~~~~~~~g~~v 230 (308)
T 4fom_A 154 GEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSV---TGYDGNWFVGRKGV 230 (308)
T ss_dssp SBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECC---BCCCSCEETTCCSC
T ss_pred cccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEE---cccceeeeeccccE
Confidence 88754321110000111347999999999999999999999876544 44455554432211 01112235678899
Q ss_pred EEEEEEEccCCC-eeEEEECCEEcCCC----CeeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEecCCh
Q psy16863 865 NLECKVIGVPQP-TLKWFKDGRELKAG----DIHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFEDKS 932 (1075)
Q Consensus 865 ~L~C~v~g~p~p-~v~W~k~g~~l~~~----~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 932 (1075)
+|.|.+.|.|.| .|+|+|+|.++..+ +...+++......|+|.|+|.|+|.+|++++++.|.|.++|-
T Consensus 231 ~l~C~~~g~P~p~~v~W~k~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 231 NLKCNADANPPPFKSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp EEECCEEEESCEEEEECCBSSSCCCSSCBCSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC-
T ss_pred EEEEEEecCCCCcEEEEEECCeECCCcEEEcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 999999999998 69999999887643 233445566677899999999999999999999999987763
No 77
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.95 E-value=3.8e-27 Score=258.95 Aligned_cols=265 Identities=18% Similarity=0.179 Sum_probs=189.3
Q ss_pred eeeecCceeeccCCeEEEEEEEecCCCc-----EEEEEECCEec-------------CCCCcEEEEEc-----CCEEEEE
Q psy16863 352 FIRRLHDIAVKVGTRARLLVEIRSPTEI-----KIHWYRNDRKL-------------EENKIYRTQHD-----GNFYFID 408 (1075)
Q Consensus 352 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~-----~v~W~k~g~~l-------------~~~~~~~~~~~-----g~~~~L~ 408 (1075)
++..|..+.+..|++++|.|.+.+.+.+ .|+|+|+|... ....++.+... .....|.
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 3455667788999999999999886654 59999998532 22233333211 1123599
Q ss_pred EcccCCCCceeEEEEEEe-CCCceeeEEEEEeecCCCCCCCeeeeecc-eEEecCCeEEEEEEEE-CCCCCeEEEEeCCE
Q psy16863 409 LSSVSLFDSGRWTCLAEN-AVGRSHCSCELSVLVPKAYKAPFFTKELE-AILTEQGTVSLECKVM-GIPTPQLIWYKDNK 485 (1075)
Q Consensus 409 I~~v~~~d~G~Y~C~a~n-~~g~~~~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~v~l~C~~~-g~p~~~v~W~~~g~ 485 (1075)
|.+++.+|+|.|+|.|.+ ..|.....+.|.|..+| .+..... ..+..++.+.|.|.+. +.|.+.++|++++.
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P-----~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~ 157 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKP-----QNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLG 157 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCC-----EEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTC
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCC-----cceecccceEeecCceEEEEEEccCccCCcEEEeecCCc
Confidence 999999999999999864 44555556666665543 3333332 3356778899999865 78999999999998
Q ss_pred eccCCC--------E----EEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCee
Q psy16863 486 KIKAGD--------I----FALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIF 553 (1075)
Q Consensus 486 ~l~~~~--------~----~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (1075)
.+.... . ..|.+......|+|.|+|.|.|..+.......+.+.. . .+|.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V-----------------~-~~P~v 219 (313)
T 4fqp_A 158 GMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTV-----------------Y-YPPEV 219 (313)
T ss_dssp CEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCB-----------------C-EEEEE
T ss_pred cccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeeccc-----------------c-cCCcc
Confidence 764321 1 2478888888999999999999887665554443321 0 13333
Q ss_pred -eeeccceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCC
Q psy16863 554 -IKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSG 632 (1075)
Q Consensus 554 -~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 632 (1075)
........+..|+.++|.|.+.|.|.|..|+|+++++.+.... ....+ +|.|.+++.+|+|.|+|.|.|..|
T Consensus 220 ~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~---~~~~~----~L~i~~v~~~d~G~Y~C~a~N~~G 292 (313)
T 4fqp_A 220 SISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA---VAQGA----QLLIRPVDKPINTTLICNVTNALG 292 (313)
T ss_dssp EEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE---EEETT----EEEECCCSSCCEEEEEEEEECSSC
T ss_pred ccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce---EEeCC----EEEECcCChhhCEEEEEEEEeCCC
Confidence 3444555677889999999999999886799999999875432 22222 799999999999999999999999
Q ss_pred ceeeeeEEEEEeCCC
Q psy16863 633 VKQFSAAYVHVLMPK 647 (1075)
Q Consensus 633 ~~~~~~~~l~v~~p~ 647 (1075)
.... ...|.|..+|
T Consensus 293 ~~~~-~~~l~V~~~P 306 (313)
T 4fqp_A 293 ARQA-ELTVQVKEGP 306 (313)
T ss_dssp EEEE-EEEEEEECCC
T ss_pred cEEE-EEEEEEEeCC
Confidence 8763 4567776543
No 78
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.95 E-value=2.1e-25 Score=261.60 Aligned_cols=366 Identities=12% Similarity=0.056 Sum_probs=222.7
Q ss_pred cccceeeccceeEEEEEecCCC------ceEEEEec-CCCeee-EEecCCCc--cc--cCCCeEEEee--CCeEEEEEcc
Q psy16863 249 LHDIAVKVGTRARLLVEIRSPT------EIKCQFDL-NNTIPF-SFRAQGDH--PI--FGNRFRAINR--DGRTELNIRR 314 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~~------~~~c~~~~-~~~~~~-~w~~~~~~--~~--~~~~~~~~~~--~~~~~L~I~~ 314 (1075)
+..+.+.+|+.++|.|.+.+.. .+.|.... +....+ .+...++. .. ...|+.+..+ .+..+|+|.+
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 86 (512)
T 1zvo_C 7 SGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRS 86 (512)
T ss_pred CCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECc
Confidence 4566788999999999987421 22221111 111111 11111111 00 1356666543 3457999999
Q ss_pred cCCCCCEEEEEEEEeCCe-----------e--EEEEEEEEEecCCCCCCeeee-ecCceeeccCCeEEEEEEEecC-CCc
Q psy16863 315 VRRDDGGRYSVTASNESG-----------Y--STAKFELSVESQVPDAPAFIR-RLHDIAVKVGTRARLLVEIRSP-TEI 379 (1075)
Q Consensus 315 ~~~~d~G~Y~C~a~n~~g-----------~--~~~~~~l~V~~~~~~~p~~~~-~~~~~~v~~G~~v~l~C~~~g~-p~~ 379 (1075)
++.+|+|.|.|.+.+..+ . ....+.|.|....+.+|.+.. .+.......|+.++|.|.+.|. |.+
T Consensus 87 v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P~p 166 (512)
T 1zvo_C 87 MSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTS 166 (512)
T ss_pred CCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeecCc
Confidence 999999999999998642 0 123457777643334565542 2211102357899999999886 654
Q ss_pred -EEEEEECCEecC-CCCcEEEEEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEE-----------EEEeecCC
Q psy16863 380 -KIHWYRNDRKLE-ENKIYRTQHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSC-----------ELSVLVPK 443 (1075)
Q Consensus 380 -~v~W~k~g~~l~-~~~~~~~~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~-----------~l~V~~~~ 443 (1075)
.|+|++++.... .........+|.. ..|.|.....+ .|.|+|.|.|..|...... .+.|.++|
T Consensus 167 ~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~pp 245 (512)
T 1zvo_C 167 VTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQP 245 (512)
T ss_pred eEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCCC
Confidence 999999764321 0111111223332 35888887777 8999999999988765544 34454443
Q ss_pred C-----------------------------------------------CCCCee-eeecc-eEEecCCeEEEEEEEECCC
Q psy16863 444 A-----------------------------------------------YKAPFF-TKELE-AILTEQGTVSLECKVMGIP 474 (1075)
Q Consensus 444 ~-----------------------------------------------~~~p~~-~~~~~-~~~~~g~~v~l~C~~~g~p 474 (1075)
. ..+|.+ ...+. ..+.+|+.+.|.|.+.|.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~ 325 (512)
T 1zvo_C 246 QAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSD 325 (512)
T ss_pred chhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEeceE
Confidence 2 112332 22222 1256799999999999864
Q ss_pred C--CeEEEEeCCEeccCC-----------CE----EEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCC
Q psy16863 475 T--PQLIWYKDNKKIKAG-----------DI----FALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDND 537 (1075)
Q Consensus 475 ~--~~v~W~~~g~~l~~~-----------~~----~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~ 537 (1075)
+ ..|+|+|+|+.+..+ .. ..|.|.....+|.|.|+|.|.|..+... ...+.....
T Consensus 326 P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~------- 397 (512)
T 1zvo_C 326 LKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPA------- 397 (512)
T ss_pred CCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecC-------
Confidence 4 399999999886521 11 2478888888899999999999887653 332322100
Q ss_pred CCCcCCCCCCCCCCeeeeeccceEeecCCeEE-EEEEEecCC-CCceEEEEeCCeEEecCCcE--EEEEcCCce-----E
Q psy16863 538 DVPFNSLMPPGPAPIFIKEVENVKAKIGTSAI-LECQVLVPP-WPRSIYWYNKEGVVEASDKY--HIMADGLGG-----Y 608 (1075)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~-L~C~~~~~p-~p~~v~W~~~~~~i~~~~~~--~~~~~~~~~-----~ 608 (1075)
.....+|......+.. .|+.+. |.|.+.|.+ .+..+.|+++|..+...... ....++.+. .
T Consensus 398 ------~~~~~~p~v~~~~~~~----~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s 467 (512)
T 1zvo_C 398 ------AQAPVKLSLNLLASSD----PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWS 467 (512)
T ss_pred ------CCCCCCCEEEEEccCc----CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEE
Confidence 0000122222222222 799999 999999854 34478999999988654211 122232222 2
Q ss_pred EEEEeeeeecCCceEEEEEECCCCc
Q psy16863 609 SIEINYLEAVDDGEWKCVATSSSGV 633 (1075)
Q Consensus 609 ~L~i~~~~~~d~G~Y~C~a~n~~g~ 633 (1075)
.|.|.....+|.|.|+|.|.|....
T Consensus 468 ~L~v~~~~~~~~g~YtC~v~h~~l~ 492 (512)
T 1zvo_C 468 VLRVPAPPSPQPATYTCVVSHEDSR 492 (512)
T ss_pred EEEECchhcCCCCeEEEEEEecCCC
Confidence 4667777777799999999998755
No 79
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.95 E-value=7.2e-27 Score=253.70 Aligned_cols=261 Identities=16% Similarity=0.186 Sum_probs=198.3
Q ss_pred CCccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCccccCCCeEEEeeCCeEEEEEcccCCCCCE
Q psy16863 242 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFGNRFRAINRDGRTELNIRRVRRDDGG 321 (1075)
Q Consensus 242 ~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~d~G 321 (1075)
+|.+...+.+..+.+|+.++|.|.+.+ .+.|++++... ...........|.|.+++.+|+|
T Consensus 4 ~p~i~~~~~~~~v~~G~~v~L~C~~~~--------------~v~W~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G 64 (289)
T 3ejj_X 4 APVIEPSGPELVVEPGETVTLRCVSNG--------------SVEWDGPISPY-----WTLDPESPGSTLTTRNATFKNTG 64 (289)
T ss_dssp CCEEESCSSEEEECTTCCEEEEEECSS--------------CCEEECSCSSS-----SEECCCSSCCEEEESSCCGGGCE
T ss_pred CcEecCCCceEEECCCCCEEEEEEeCC--------------cEEEccCCCce-----EEEeccCCccEEEEeeeccccCE
Confidence 455556667788999999999998754 36677544321 12223344568999999999999
Q ss_pred EEEEEEEeCCeeEEEEEEEEEecCCCCCCe-eeeecCceeeccCCeEEEEEEEecCCCcE-EEEEE-CCEecCCCCcEEE
Q psy16863 322 RYSVTASNESGYSTAKFELSVESQVPDAPA-FIRRLHDIAVKVGTRARLLVEIRSPTEIK-IHWYR-NDRKLEENKIYRT 398 (1075)
Q Consensus 322 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~-~~~~~~~~~v~~G~~v~l~C~~~g~p~~~-v~W~k-~g~~l~~~~~~~~ 398 (1075)
.|+|.|.|..|..+..+.|.|.. +|. +...+....+.+|+++.|.|.+.+.+.+. +.|++ ++..+..+.++.+
T Consensus 65 ~Y~C~~~~~~~~~~~~~~l~V~~----~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~ 140 (289)
T 3ejj_X 65 TYRCTELEDPMAGSTTIHLYVKD----PAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFF 140 (289)
T ss_dssp EEEEECCC-----CEEEEEEECC----SSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEE
T ss_pred EEEEEEeccCCcceeEEEEEEeC----CCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEE
Confidence 99999999888888888888875 222 55666788999999999999998876554 99986 7777777777766
Q ss_pred EEcCCEEEEEEcccCCCCceeEEEEEE-eCCCceeeEEEEEeecCCCCCCCeeeeecceE-EecCCeEEEEEEEEC-CCC
Q psy16863 399 QHDGNFYFIDLSSVSLFDSGRWTCLAE-NAVGRSHCSCELSVLVPKAYKAPFFTKELEAI-LTEQGTVSLECKVMG-IPT 475 (1075)
Q Consensus 399 ~~~g~~~~L~I~~v~~~d~G~Y~C~a~-n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~-~~~g~~v~l~C~~~g-~p~ 475 (1075)
..++ .|.|.+++.+|+|.|+|.|. |..+.....+.|.|...+. .+|.+...+... +.+|+.+.|.|.+.+ .|.
T Consensus 141 ~~~~---~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~-~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~ 216 (289)
T 3ejj_X 141 SPWR---GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHP-EPPQIKLEPSKLVRIRGEAAQIVCSATNAEVG 216 (289)
T ss_dssp ETTT---EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCC-CCCEEEEESSSEECCSSSCEEEEEEEEESSSC
T ss_pred CCCC---CEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCC-CCCeEEecCCceEEEeCCcEEEEEEeCCCCCc
Confidence 5554 38899999999999999999 4445556667777764321 345555554443 578999999999998 789
Q ss_pred CeEEEEeCCEeccCCC-----------EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEec
Q psy16863 476 PQLIWYKDNKKIKAGD-----------IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARG 529 (1075)
Q Consensus 476 ~~v~W~~~g~~l~~~~-----------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~ 529 (1075)
+.+.|++++..+.... ...|.|..+..+|+|.|+|.|.|..|...+++.|.+..
T Consensus 217 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~ 281 (289)
T 3ejj_X 217 FNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVE 281 (289)
T ss_dssp CEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC-
T ss_pred eEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEe
Confidence 9999999999886532 34799999999999999999999999999999888763
No 80
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.95 E-value=1.3e-26 Score=254.65 Aligned_cols=270 Identities=15% Similarity=0.184 Sum_probs=195.8
Q ss_pred ccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCcc------------c-cCCCeEEEee-----CCe
Q psy16863 246 IRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHP------------I-FGNRFRAINR-----DGR 307 (1075)
Q Consensus 246 ~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~------------~-~~~~~~~~~~-----~~~ 307 (1075)
+..+.++.+..|+.++|.|.+..+.... .....+.|++++... . ...+++.... .+.
T Consensus 4 v~~P~~v~~~~G~~v~L~C~v~~~~~~~-----~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 78 (313)
T 4fqp_A 4 VQAPTQVPGFLGDSVTLPCYLQVPNMEV-----THVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRN 78 (313)
T ss_dssp EECCSEECCBTTSCEEECCEEECCTTSC-----CCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCB
T ss_pred EcCCCEEEEecCCCEEEEEEEECCCCCc-----cceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccc
Confidence 3445667788999999999887543100 001124566554321 1 1223333211 123
Q ss_pred EEEEEcccCCCCCEEEEEEEEe-CCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEE-ecCCCcEEEEEE
Q psy16863 308 TELNIRRVRRDDGGRYSVTASN-ESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEI-RSPTEIKIHWYR 385 (1075)
Q Consensus 308 ~~L~I~~~~~~d~G~Y~C~a~n-~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~-~g~p~~~v~W~k 385 (1075)
.+|.|.+++.+|+|.|+|.|.+ ..|..+..+.|.|.. +|.+...+....+..|+.+.|.|.+ .+.|.+.+.|++
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~----~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~ 154 (313)
T 4fqp_A 79 ASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLA----KPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHS 154 (313)
T ss_dssp CCEEECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBB----CCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEE
T ss_pred eEEEECcCChhhCEEEEEEEeeccCcceeeeeeeeecc----CCcceecccceEeecCceEEEEEEccCccCCcEEEeec
Confidence 4799999999999999999865 566677777777764 6777777777788899999999987 478899999999
Q ss_pred CCEecCCCCcEEEEEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEE--EEEeecCCCCCCCeee-ee-cceEE
Q psy16863 386 NDRKLEENKIYRTQHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSC--ELSVLVPKAYKAPFFT-KE-LEAIL 458 (1075)
Q Consensus 386 ~g~~l~~~~~~~~~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~--~l~V~~~~~~~~p~~~-~~-~~~~~ 458 (1075)
++..+..........++.. ..|.|..+..+|+|.|+|.|.|..+....+. .|.|..+| .+. .. ....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P-----~v~~~~~~~~~~ 229 (313)
T 4fqp_A 155 DLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPP-----EVSISGYDNNWY 229 (313)
T ss_dssp TTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEE-----EEEEECCCSCEE
T ss_pred CCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCC-----ccccccccceee
Confidence 9988765444333334433 3588999999999999999999887765444 44444433 332 22 22346
Q ss_pred ecCCeEEEEEEEECCCCC-eEEEEeCCEeccCCCEE---EEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEec
Q psy16863 459 TEQGTVSLECKVMGIPTP-QLIWYKDNKKIKAGDIF---ALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARG 529 (1075)
Q Consensus 459 ~~g~~v~l~C~~~g~p~~-~v~W~~~g~~l~~~~~~---~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~ 529 (1075)
.+|+.++|.|.+.|+|.| .|+|+|+|+++...... .|.|..+..+|+|.|+|.|.|..|....++.|.|..
T Consensus 230 ~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 304 (313)
T 4fqp_A 230 LGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKE 304 (313)
T ss_dssp TTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred cCCCeEEEEEEecCCCCCcEEEEEECCEECCCceEEeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 678899999999999999 79999999998654332 699999999999999999999999999999999873
No 81
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.95 E-value=2.4e-25 Score=253.19 Aligned_cols=353 Identities=20% Similarity=0.240 Sum_probs=245.3
Q ss_pred CccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCC-Ccccc------CCCeEEEeeCCeEEEEEccc
Q psy16863 243 PAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQG-DHPIF------GNRFRAINRDGRTELNIRRV 315 (1075)
Q Consensus 243 p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~-~~~~~------~~~~~~~~~~~~~~L~I~~~ 315 (1075)
|.+.. +.+..+.+|+.++|.|.+.+ .+.+.+.|++++ +..+. ..++.+........|.|.++
T Consensus 2 P~i~~-~~~~~~~~G~~v~l~C~~~g----------~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 70 (389)
T 2jll_A 2 PHIIQ-LKNETTYENGQVTLVCDAEG----------EPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDV 70 (389)
T ss_dssp CEEEE-CCCEEEETTSEEEEEEEEEC----------SSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESC
T ss_pred CeEEe-cCceEEeCCCeEEEEEEeec----------ccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEccc
Confidence 44443 66778899999999887754 455678888872 33332 35677766667789999999
Q ss_pred CCCCCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCC-
Q psy16863 316 RRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENK- 394 (1075)
Q Consensus 316 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~- 394 (1075)
+.+|+|.|+|.|.|..|..+..+.|.|.. +|.+...+....+.+|+.+.|.|.+.|.|.+.|+|+|+|..+....
T Consensus 71 ~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~----~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~ 146 (389)
T 2jll_A 71 KLSDSGRYDCEAASRIGGHQKSMYLDIEY----APKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNT 146 (389)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEEE----EEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTC
T ss_pred ChhhCEEEEEEEEeCCCCcceEEEEEEEe----CCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccC
Confidence 99999999999999999999999999985 7777766666678999999999999999999999999999997654
Q ss_pred -cEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEE--
Q psy16863 395 -IYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVM-- 471 (1075)
Q Consensus 395 -~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~-- 471 (1075)
++.+..++....|.|.++..+|+|.|+|.|.|..|....++.+.+...|. +|... ......+..+.|.|...
T Consensus 147 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~--~P~~~---~~~~~~~~~~~l~w~~p~~ 221 (389)
T 2jll_A 147 TNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPS--SPYGV---KIIELSQTTAKVSFNKPDS 221 (389)
T ss_dssp TTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCC--CCEEE---EEEEECSSCEEEEEECCSC
T ss_pred ceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCC--CCcce---EEeeccCCEEEEEEeCCCC
Confidence 67777777778899999999999999999999999988777777755442 23211 11223456788999743
Q ss_pred --CCCCC--eEEEEeCCEec-----cCCCEEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcC
Q psy16863 472 --GIPTP--QLIWYKDNKKI-----KAGDIFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFN 542 (1075)
Q Consensus 472 --g~p~~--~v~W~~~g~~l-----~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~ 542 (1075)
|.|.. .+.|.+++... .......+.|..+...+.|.|+|.|.|..|....+..+.+...+
T Consensus 222 ~~g~pi~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~----------- 290 (389)
T 2jll_A 222 HGGVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLP----------- 290 (389)
T ss_dssp CTTSCEEEEEEEEEETTCSCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC-----------
T ss_pred CCCcceEEEEEEEEECCCcccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecC-----------
Confidence 22332 57788877532 12334578899999999999999999999977655544443110
Q ss_pred CCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCC-C---ceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeec
Q psy16863 543 SLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPW-P---RSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAV 618 (1075)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~-p---~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~ 618 (1075)
..++.+ |.+. .....+..+.|.|....... + +.+.|...+..- ........+ ....+.|.++...
T Consensus 291 -~~~p~~-p~~~-----~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~---~~~~~~~~~-~~~~~~i~~L~~~ 359 (389)
T 2jll_A 291 -VREPSP-PSIH-----GQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKED---QWLEKKVQG-NKDHIILEHLQWT 359 (389)
T ss_dssp -CCCCCC-CCEE-----EEEETTTEEEEEECCCCCCSSCCCEEEEEEEC--------CCBCCEECT-TCCEEEECSCCTT
T ss_pred -CCCCCC-Cccc-----cccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCc---ceeEeeccC-CcceEEeCCcCCC
Confidence 111222 2221 11235678899887532111 1 123332211100 000111122 2336788999999
Q ss_pred CCceEEEEEECCCCceeee
Q psy16863 619 DDGEWKCVATSSSGVKQFS 637 (1075)
Q Consensus 619 d~G~Y~C~a~n~~g~~~~~ 637 (1075)
..+.|++.|.|..|....+
T Consensus 360 t~Y~~~V~A~n~~G~s~~s 378 (389)
T 2jll_A 360 MGYEVQITAANRLGYSEPT 378 (389)
T ss_dssp CEEEEEEEEEC-CCBCCCE
T ss_pred CEEEEEEEEEcCCcCCCce
Confidence 9999999999999987654
No 82
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.95 E-value=8.3e-28 Score=264.72 Aligned_cols=261 Identities=15% Similarity=0.197 Sum_probs=196.2
Q ss_pred cccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCccc-c---CCCeEEEeeCCeEEEEEcccCCCCCEEEE
Q psy16863 249 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPI-F---GNRFRAINRDGRTELNIRRVRRDDGGRYS 324 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~~-~---~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~ 324 (1075)
...+.+.+|+.+.|.|.+.+.+ +...+.|++++.... . ..++.. .++ .|.|.+++.+|+|.|+
T Consensus 12 ~~~~~v~~G~~v~L~C~~~~~~---------~~~~v~W~k~~~~~~~~~~~~~~~~~--~~~--~L~i~~v~~~D~G~Y~ 78 (315)
T 1itb_B 12 KIILVSSANEIDVRPCPLNPNE---------HKGTITWYKDDSKTPVSTEQASRIHQ--HKE--KLWFVPAKVEDSGHYY 78 (315)
T ss_dssp CCCCEEETTSCCCCBCCCCSCC---------CSSCCCEECTTSCSCSCCCTTSSSEE--CSS--BEECTTCCGGGCSCCE
T ss_pred ceEEEEcCCCcEEEEeeccCcC---------CCceEEEEeCCCcCccccccCCcEec--cCC--eEEECCCChhhCEEEE
Confidence 3456788999999988776432 245788988775421 1 233332 232 7999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEecCCCCCCeeeee---cCceeeccCCeEEEEEEE------ecCCCcEEEEEECCEecCCCCc
Q psy16863 325 VTASNESGYSTAKFELSVESQVPDAPAFIRR---LHDIAVKVGTRARLLVEI------RSPTEIKIHWYRNDRKLEENKI 395 (1075)
Q Consensus 325 C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~---~~~~~v~~G~~v~l~C~~------~g~p~~~v~W~k~g~~l~~~~~ 395 (1075)
|.|.|..|.....+.+.+.. .+|.+... .....+.+|+++.|.|.+ .|.|.+.++|+|+|..+..+..
T Consensus 79 C~a~n~~g~~~~~~~v~v~~---~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~ 155 (315)
T 1itb_B 79 CVVRNSSYCLRIKISAKFVE---NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 155 (315)
T ss_dssp ECCCSSSCCCCEECCCEEEC---CCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSS
T ss_pred EEEeCCceEEEEEEEEEEeC---CCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccc
Confidence 99999988766666666543 23433222 234578899999999998 7889999999999999865433
Q ss_pred EEEEEcCCEEEEEEcccCCCCceeEEEEEE-eCCCce---eeEEEEEeecCCCCCCCeeeeecce--EEecCCeEEEEEE
Q psy16863 396 YRTQHDGNFYFIDLSSVSLFDSGRWTCLAE-NAVGRS---HCSCELSVLVPKAYKAPFFTKELEA--ILTEQGTVSLECK 469 (1075)
Q Consensus 396 ~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~-n~~g~~---~~s~~l~V~~~~~~~~p~~~~~~~~--~~~~g~~v~l~C~ 469 (1075)
..... +. .|.|.+++.+|+|.|+|.|. |..|.. .....+.+..+....+|.+...+.. .+.+|+.+.|.|.
T Consensus 156 ~~~~~-~~--~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~ 232 (315)
T 1itb_B 156 HFSGV-KD--RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICN 232 (315)
T ss_dssp SEEEE-TT--EEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEE
T ss_pred eEeec-Cc--eEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEE
Confidence 22222 33 58999999999999999999 788876 3334444444443456666655542 4789999999999
Q ss_pred EECCCCCeEEEEeCCEeccCCC---------------------EEEEEeCCCCCCC-cEEEEEEEEecceeeEEEEEEEE
Q psy16863 470 VMGIPTPQLIWYKDNKKIKAGD---------------------IFALTANPKDPSS-LGTYTCEAVNCMGAAFSTSRVIA 527 (1075)
Q Consensus 470 ~~g~p~~~v~W~~~g~~l~~~~---------------------~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~~~~~~v~v 527 (1075)
+.|.|.|.+.|+++|..+..+. ...|.|..+..+| +|.|+|.|.|..|....++.|.|
T Consensus 233 ~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v 312 (315)
T 1itb_B 233 VTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIY 312 (315)
T ss_dssp EEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEEC
T ss_pred EecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEe
Confidence 9999999999999999987643 2379999999999 99999999999999998888876
Q ss_pred e
Q psy16863 528 R 528 (1075)
Q Consensus 528 ~ 528 (1075)
.
T Consensus 313 ~ 313 (315)
T 1itb_B 313 P 313 (315)
T ss_dssp C
T ss_pred c
Confidence 4
No 83
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.95 E-value=3.2e-25 Score=252.17 Aligned_cols=338 Identities=17% Similarity=0.214 Sum_probs=230.1
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEEC--CEecCC-----CCcEEEEEcCCEEEEEEcccCCCCceeEE
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRN--DRKLEE-----NKIYRTQHDGNFYFIDLSSVSLFDSGRWT 421 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~--g~~l~~-----~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~ 421 (1075)
+|.|.. +.+..+.+|+++.|.|.+.|.|.+.|+|+|+ |..+.. ..++.+..++....|.|.+++.+|+|.|+
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 466665 6677888999999999999999999999999 888865 46777776667788999999999999999
Q ss_pred EEEEeCCCceeeEEEEEeecCCCCCCCeeeeecce-EEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCC---------
Q psy16863 422 CLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEA-ILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGD--------- 491 (1075)
Q Consensus 422 C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~-~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~--------- 491 (1075)
|.|.|..|....++.|.|..+|. +...... .+.+|+.+.|.|.+.|.|.+.++|+|+|..+....
T Consensus 80 C~a~n~~g~~~~~~~l~V~~~P~-----~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~ 154 (389)
T 2jll_A 80 CEAASRIGGHQKSMYLDIEYAPK-----FISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYST 154 (389)
T ss_dssp EEEECSSCEEEEEEEEEEEEEEE-----ECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEEC
T ss_pred EEEEeCCCCcceEEEEEEEeCCE-----EecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEecc
Confidence 99999999998899999987654 3333333 36789999999999999999999999999986543
Q ss_pred --EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEE
Q psy16863 492 --IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAI 569 (1075)
Q Consensus 492 --~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~ 569 (1075)
...|.|..+...|+|.|+|.|.|..|.....+.+.+... +.+|..+. .....+..+.
T Consensus 155 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~----------------P~~P~~~~-----~~~~~~~~~~ 213 (389)
T 2jll_A 155 GRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADV----------------PSSPYGVK-----IIELSQTTAK 213 (389)
T ss_dssp SSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCC----------------CCCCEEEE-----EEEECSSCEE
T ss_pred CCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCC----------------CCCCcceE-----EeeccCCEEE
Confidence 346899999999999999999999999888877776421 11111111 1123367899
Q ss_pred EEEEEecCC--CC---ceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEEe
Q psy16863 570 LECQVLVPP--WP---RSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHVL 644 (1075)
Q Consensus 570 L~C~~~~~p--~p---~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~ 644 (1075)
|.|...... .| ..+.|.+++.. .+...........|.|.++...+.|.|+|.|.|..|....+.......
T Consensus 214 l~w~~p~~~~g~pi~~y~v~~~~~~~~-----~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t 288 (389)
T 2jll_A 214 VSFNKPDSHGGVPIHHYQVDVKEVASE-----IWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQT 288 (389)
T ss_dssp EEEECCSCCTTSCEEEEEEEEEETTCS-----CCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEEC
T ss_pred EEEeCCCCCCCcceEEEEEEEEECCCc-----ccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEe
Confidence 999853221 12 24678776542 222233322345799999999999999999999999866443222222
Q ss_pred CCC-CcCCCceeeccceeeecCCeEEEEEEEec---CCCCeEE--EEECCE-------Ec-CCCCeEEEeecCC--CceE
Q psy16863 645 MPK-NYRKPRFVESLKAVMTDDGLVSFECKVVG---FPTPTLQ--WFKDNE-------EL-KPGDVYQLTGTSS--LGSY 708 (1075)
Q Consensus 645 ~p~-~~~~p~~~~~~~~~~~~g~~~~l~C~v~g---~p~p~v~--W~k~g~-------~l-~~~~~~~~~~~~d--~G~Y 708 (1075)
.+. ...+|.+. ........+.|....-. .|.-.|. |...+. .+ .....+.+.+... ...|
T Consensus 289 ~~~~~p~~p~~~----~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~ 364 (389)
T 2jll_A 289 LPVREPSPPSIH----GQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEV 364 (389)
T ss_dssp CCCCCCCCCCEE----EEEETTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBCCEECTTCCEEEECSCCTTCEEEE
T ss_pred cCCCCCCCCccc----cccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeEeeccCCcceEEeCCcCCCCEEEE
Confidence 221 12233321 12224556777775321 1222232 222111 11 1123455555443 3556
Q ss_pred EEEEEecCceEEEE
Q psy16863 709 CCVAKNVMGKAESS 722 (1075)
Q Consensus 709 ~C~a~N~~g~~~~~ 722 (1075)
++.|.|..|....+
T Consensus 365 ~V~A~n~~G~s~~s 378 (389)
T 2jll_A 365 QITAANRLGYSEPT 378 (389)
T ss_dssp EEEEEC-CCBCCCE
T ss_pred EEEEEcCCcCCCce
Confidence 88999999975544
No 84
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.95 E-value=7.1e-26 Score=247.99 Aligned_cols=270 Identities=19% Similarity=0.245 Sum_probs=199.5
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCC-CcEEEE-EcCCEEEEEEcccCCCCceeEEEEE
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEEN-KIYRTQ-HDGNFYFIDLSSVSLFDSGRWTCLA 424 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~-~~g~~~~L~I~~v~~~d~G~Y~C~a 424 (1075)
+.+|.|+..+.+..+.+|++++|.|.+.|.|.+.|+|+|+|..+... .++.+. ..+..+.|.|.+++.+|+|.|+|.|
T Consensus 2 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 81 (305)
T 2nzi_A 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (305)
T ss_dssp CCCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEE
T ss_pred CCCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEE
Confidence 35899999999999999999999999999999999999999998754 455554 3566778999999999999999999
Q ss_pred EeCCCceeeEEEEEeecCCCCCCCeeeeec-ceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCC---------EEE
Q psy16863 425 ENAVGRSHCSCELSVLVPKAYKAPFFTKEL-EAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGD---------IFA 494 (1075)
Q Consensus 425 ~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~---------~~~ 494 (1075)
.|..|....++.|.|..++.+..|.+...+ ...+.+|+.+.|.|.+.|.|.+.+.|++++..+..+. ...
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~ 161 (305)
T 2nzi_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTS 161 (305)
T ss_dssp EETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEE
T ss_pred EcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceE
Confidence 999999888889999877654444332222 2347789999999999999999999999999886543 346
Q ss_pred EEeCC-CCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEE
Q psy16863 495 LTANP-KDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQ 573 (1075)
Q Consensus 495 l~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~ 573 (1075)
|.+.. +...|+|.|+|.|.|..|....+..|.|.+.+ . +|.... .....+..+.|.|.
T Consensus 162 l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P----------------~-~p~~~~----~~~~~~~~v~l~w~ 220 (305)
T 2nzi_A 162 LVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVP----------------D-PPRGVK----VSDVSRDSVNLTWT 220 (305)
T ss_dssp EEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCC----------------C-CCEEEE----EESCCSSCEEEEEE
T ss_pred EEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCC----------------C-CCCCce----eeeccCCEEEEEEc
Confidence 88888 99999999999999999999999999887421 1 121111 11234566777776
Q ss_pred EecCCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceeeee
Q psy16863 574 VLVPPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSA 638 (1075)
Q Consensus 574 ~~~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 638 (1075)
.........+.+|.-.........+....... ...|.|.++...+.|.|+|.|.|..|....+.
T Consensus 221 ~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~~-~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~ 284 (305)
T 2nzi_A 221 EPASDGGSKITNYIVEKCATTAERWLRVGQAR-ETRYTVINLFGKTSYQFRVIAENKFGLSKPSE 284 (305)
T ss_dssp CCSCCSBSCEEEEEEEEEETTSCCEEEEEEES-SSEEEECSCCSSCEEEEEEEEEETTEECCCCC
T ss_pred CCccCCCCceeEEEEEEecCCCCccEECcccc-CceEEecCCCCCCeEEEEEEEEeCCcccCCcC
Confidence 53221111233332222211222332222211 23789999999999999999999999876543
No 85
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.95 E-value=2.6e-27 Score=257.64 Aligned_cols=276 Identities=16% Similarity=0.221 Sum_probs=204.3
Q ss_pred CcccceeecceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCCceeccCcEEEEecCCeEEEEEceeccCCC
Q psy16863 134 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFGNRFRAINRDGRTELNIRRVRRDDG 213 (1075)
Q Consensus 134 ~~p~~~~~~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 213 (1075)
.+|.|...+.+..+.+|++++|.|.+.+. +.|++++.. ++..........|.|.+++.+|+
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~--------------v~W~~~~~~-----~~~~~~~~~~~~L~i~~~~~~d~ 63 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS--------------VEWDGPPSP-----HWTLYSDGSSSILSTNNATFQNT 63 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC--------------CCBCCCCCS-----SCEECCBTTEEEEEESSCCGGGC
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc--------------eEEccCCCC-----ceEEeccCceEEEEEcccccccC
Confidence 35777777888899999999999987652 678765432 23344445567999999999999
Q ss_pred eEEEEEEEcCceeEEEEEEEeeeccCCCCCccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCcc
Q psy16863 214 GRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHP 293 (1075)
Q Consensus 214 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~ 293 (1075)
|.|+|.|.|..|..+..+.|.|.. .+..+...+.+..+.+|+.++|.|.+.++. ....+.|+++++..
T Consensus 64 G~Y~C~~~n~~~~~~~~~~l~V~~---~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~---------~~~~v~W~~~~~~~ 131 (292)
T 4dkd_C 64 GTYRCTEPGDPLGGSAAIHLYVKD---PARPWNVLAQEVVVFEDQDALLPCLLTDPV---------LEAGVSLVRVRGRP 131 (292)
T ss_dssp SCEEECCCC----CCEEECCEECC---SSCCEEESCSEEEEETTSCEECCEEESSGG---------GGSSEEEEEGGGCC
T ss_pred EEEEEEEccCCCCcceEEEEEEcC---ccccccccCCeEEEcCCCcEEEeeeCCCCC---------cceeEEEEecCCCc
Confidence 999999999888888888888863 122345566778899999999988877531 12568898876666
Q ss_pred cc-CCCeEEEeeCCeEEEEEcccCCCCCEEEEEEEEeCCeeE-EEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEE
Q psy16863 294 IF-GNRFRAINRDGRTELNIRRVRRDDGGRYSVTASNESGYS-TAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLV 371 (1075)
Q Consensus 294 ~~-~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C 371 (1075)
+. ..++.....+ .|.|.+++.+|+|.|+|.|.|..+.. +..+.|.|....+.+|.+...+....+.+|+.+.|.|
T Consensus 132 ~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C 208 (292)
T 4dkd_C 132 LMRHTNYSFSPWH---GFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVC 208 (292)
T ss_dssp CCSSCCEECCSSS---CCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEE
T ss_pred cccCCcccccCCc---eEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEE
Confidence 55 4444433222 39999999999999999999987754 4478888886555588888888888888999999999
Q ss_pred EEecCC-CcEEEEEECCEecCCCCcEEEEEc--CCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCC
Q psy16863 372 EIRSPT-EIKIHWYRNDRKLEENKIYRTQHD--GNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPK 443 (1075)
Q Consensus 372 ~~~g~p-~~~v~W~k~g~~l~~~~~~~~~~~--g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~ 443 (1075)
.+.+.| ++.+.|++++..+........... .....|.|.+++.+|+|.|+|.|.|..|....++.|.|....
T Consensus 209 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 209 SASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESA 283 (292)
T ss_dssp EEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred EecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCC
Confidence 998865 468999999987765443322211 123479999999999999999999999998888888877543
No 86
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.95 E-value=2.3e-27 Score=261.01 Aligned_cols=256 Identities=14% Similarity=0.128 Sum_probs=178.9
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
..+|.|...+. ..+.+|++++|.|.+.+. .+.+.|+|+|..+..... .......|.|.+++.+|+|.|+|.|.|
T Consensus 22 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~----~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 95 (316)
T 3vh8_G 22 QDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFH----GRIFQESFNMSPVTTAHAGNYTCRGSH 95 (316)
T ss_dssp --CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHH----HCCBSSCEEECSCCGGGCEEEEEEEBC
T ss_pred CCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeec----CCcceEEEEECCCCcccCeEEEEEEEc
Confidence 35788877766 678899999999999877 689999999987643211 011122488999999999999999987
Q ss_pred CCC-----ceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccC----------CC
Q psy16863 427 AVG-----RSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKA----------GD 491 (1075)
Q Consensus 427 ~~g-----~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~----------~~ 491 (1075)
..+ ..+....|.|... ..+|.+...+...+.+|+.++|.|.+. .+.+.+.|+|+|..+.. ..
T Consensus 96 ~~~~~~~~~~s~~~~l~V~~~--~~~p~~~~~~~~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~ 172 (316)
T 3vh8_G 96 PHSPTGWSAPSNPVVIMVTGN--HRKPSLLAHPGPLVKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGVS 172 (316)
T ss_dssp SSSSSSBCCCCCCEEEEEECS--SCCCEEEEESCSEEETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTEE
T ss_pred CCCCcceecCCCcEEEEEecC--CCCCeEEecCCCccCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCCc
Confidence 432 2233455555543 345666666555688999999999995 46679999999988743 13
Q ss_pred EEEEEeCCCCCCCcEEEEEEEEecceee-----EEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCC
Q psy16863 492 IFALTANPKDPSSLGTYTCEAVNCMGAA-----FSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGT 566 (1075)
Q Consensus 492 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-----~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 566 (1075)
...|.|..+..+|+|.|+|.|.|..|.. .....|.|... .++|.+...+. ..+.+|+
T Consensus 173 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~-----------------~~~p~i~~~~~-~~v~~G~ 234 (316)
T 3vh8_G 173 KANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGP-----------------YEKPSLSAQPG-PKVQAGE 234 (316)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECS-----------------SCCCEEEEESC-SCCCTTS
T ss_pred eEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCC-----------------CCCCeEEeCCC-CeecCCC
Confidence 4579999999999999999999988742 33455655421 13445544433 3678999
Q ss_pred eEEEEEEEecCCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCc
Q psy16863 567 SAILECQVLVPPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGV 633 (1075)
Q Consensus 567 ~~~L~C~~~~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 633 (1075)
.++|.|.+.. |.+ .+.|++++..+...........+.....|.|.+++ |+|.|+|.|.|..+.
T Consensus 235 ~v~L~C~~~~-~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~ 297 (316)
T 3vh8_G 235 SVTLSCSSRS-SYD-MYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSP 297 (316)
T ss_dssp CCEEEEEESS-CCS-EEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBT
T ss_pred cEEEEEECCC-CCc-EEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCc
Confidence 9999999974 445 89999999876532222222223233589999999 999999999998764
No 87
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.95 E-value=2.2e-28 Score=272.39 Aligned_cols=272 Identities=15% Similarity=0.250 Sum_probs=202.7
Q ss_pred CCCeeeeeccceEeecCCeEEEEEEEe-------cCCCCceEEEEeCCeEE--ecCCcEEEEEcCCceEEEEEeeeeecC
Q psy16863 549 PAPIFIKEVENVKAKIGTSAILECQVL-------VPPWPRSIYWYNKEGVV--EASDKYHIMADGLGGYSIEINYLEAVD 619 (1075)
Q Consensus 549 ~~~~~~~~~~~~~v~~G~~~~L~C~~~-------~~p~p~~v~W~~~~~~i--~~~~~~~~~~~~~~~~~L~i~~~~~~d 619 (1075)
..|.+...+.+..+.+|+.+.|.|.+. +.|.+ .|.|++++..+ ....+.++...+ ..|.|.+++.+|
T Consensus 17 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~-~v~W~k~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~D 92 (339)
T 3o4o_C 17 SCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRI-NLTWHKNDSARTVPGEEETRMWAQD---GALWLLPALQED 92 (339)
T ss_dssp -CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCC-BCCCEESSCCSCCSCCSSSCEEEET---TEEEESSBCTTC
T ss_pred hhHhhCcCceEEEEECCccEEEEeccccccccccCCCCc-eEEEEECCCCcccCccccccEEeeC---CeEEECCCCccc
Confidence 457788888999999999999999998 77766 89999999873 332223332222 179999999999
Q ss_pred CceEEEEEECCCCceeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEE-----EecCCCCeEEEEECCEEcCCC
Q psy16863 620 DGEWKCVATSSSGVKQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECK-----VVGFPTPTLQWFKDNEELKPG 694 (1075)
Q Consensus 620 ~G~Y~C~a~n~~g~~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~-----v~g~p~p~v~W~k~g~~l~~~ 694 (1075)
+|.|+|.+.|..|... ....|.|..++....+.+. ....+..|+.+.|.|. +.|.|.+.++|+|+|..+..+
T Consensus 93 ~G~Y~C~~~n~~g~~~-~~~~l~V~~~~~~~~~~~~--~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~ 169 (339)
T 3o4o_C 93 SGTYVCTTRNASYCDK-MSIELRVFENTDAFLPFIS--YPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKD 169 (339)
T ss_dssp CEEEECCEEETTEEEE-EEEEEEEECSCGGGHHHHC--EEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTT
T ss_pred CEEEEEEEECCcceEE-EEEEEEEEcCCCccccccc--cceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCC
Confidence 9999999999988654 3456667665432211111 1235678999999999 788999999999999988654
Q ss_pred -C---------eEEEe--ecCCCceEEEEEEecCc----eEEEEEEEEEEeccccCchhhhhhhccCCCCCeEEecccee
Q psy16863 695 -D---------VYQLT--GTSSLGSYCCVAKNVMG----KAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSC 758 (1075)
Q Consensus 695 -~---------~~~~~--~~~d~G~Y~C~a~N~~g----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 758 (1075)
. .+.+. ..+|.|.|+|.|.|..| .....+.|.|..... ..+|.+...+...
T Consensus 170 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~-------------~~~P~i~~~~~~~ 236 (339)
T 3o4o_C 170 NEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKE-------------ETIPVIISPLKTI 236 (339)
T ss_dssp CSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCC-------------CCCCEECCCSCCC
T ss_pred CceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCC-------------CCCCEEecCCcee
Confidence 2 34443 23789999999999988 456677888875321 1477888777778
Q ss_pred eeecCCeEEEEEEE---ecCC-CCeEEEEECCEEeec---------CCcEEEEEeeCc--EEEEEEccccCCCC-eEEEE
Q psy16863 759 QATVNEEFKFTVQV---SISP-EPKVSWFRDDQQVVE---------SDNVKILKETLG--VCHLKIHALEVADQ-AEWKC 822 (1075)
Q Consensus 759 ~~~~g~~~~l~C~v---~g~p-~p~v~W~k~g~~i~~---------~~~~~~~~~~~~--~~~L~I~~~~~~D~-G~Y~C 822 (1075)
.+..|+.+.|.|.+ .|.| .+.+.|+++|.++.. +.++.+...+.. ...|.|.+++.+|+ |.|+|
T Consensus 237 ~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C 316 (339)
T 3o4o_C 237 SASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKC 316 (339)
T ss_dssp CCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEE
T ss_pred EeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEE
Confidence 89999999999999 8999 889999999987642 233322222211 22699999999997 99999
Q ss_pred EEEeCCceEEEEEEEEEE
Q psy16863 823 IATNDFGQSITSCFLKLN 840 (1075)
Q Consensus 823 ~A~N~~G~~~~s~~l~V~ 840 (1075)
.|.|.+|.+...+.+.+.
T Consensus 317 ~a~N~~G~~~~~~~~~~~ 334 (339)
T 3o4o_C 317 VVHNTLSFQTLRTTVKEH 334 (339)
T ss_dssp EEEETTEEECCBCCCCC-
T ss_pred EEEeccCceEEEEEhhHh
Confidence 999999998777665543
No 88
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.94 E-value=1.1e-26 Score=252.14 Aligned_cols=264 Identities=15% Similarity=0.169 Sum_probs=177.5
Q ss_pred eeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCC-EEEEEEcccCCCCceeEEEEEEeCCC
Q psy16863 351 AFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGN-FYFIDLSSVSLFDSGRWTCLAENAVG 429 (1075)
Q Consensus 351 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~-~~~L~I~~v~~~d~G~Y~C~a~n~~g 429 (1075)
.|.....+..+.+|++++|.|.+.+. |+|+|+|..+. .+.....++. ...|.|.+++.+|+|.|+|.|.|..|
T Consensus 2 ~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 75 (289)
T 3mjg_X 2 VVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRG 75 (289)
T ss_dssp CBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC---
T ss_pred eecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCC
Confidence 34444566789999999999999764 99999998874 2233333332 36899999999999999999999887
Q ss_pred c-eeeEEEEEeecCCCCCCCeeeeecc---eEEecCCeEEEEEEEECCCCCeEEEEeCC--EeccCC--CEEEEEeCCCC
Q psy16863 430 R-SHCSCELSVLVPKAYKAPFFTKELE---AILTEQGTVSLECKVMGIPTPQLIWYKDN--KKIKAG--DIFALTANPKD 501 (1075)
Q Consensus 430 ~-~~~s~~l~V~~~~~~~~p~~~~~~~---~~~~~g~~v~l~C~~~g~p~~~v~W~~~g--~~l~~~--~~~~l~i~~~~ 501 (1075)
. ...+..+.|.+... ..|.+..... ..+.+|+.+.|.|.+. .|.+.++|++++ ..+... ....+. .
T Consensus 76 ~~~~~~~~~~v~v~~p-~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~~~~~~~~----~ 149 (289)
T 3mjg_X 76 LETDERKRLYIFVPDP-TVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPYDHQRGFS----G 149 (289)
T ss_dssp ---CCCEEEEEECCCT-TCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCEETTTEEE----E
T ss_pred CCcCcEEeEEEEEECC-CcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccceeecCCcCee----e
Confidence 6 22344455554321 1122222222 3478999999999998 688889998865 333211 001111 3
Q ss_pred CCCcEEEEEEEEecceeeEEE-EEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCC
Q psy16863 502 PSSLGTYTCEAVNCMGAAFST-SRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWP 580 (1075)
Q Consensus 502 ~~d~G~Y~C~a~n~~g~~~~~-~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p 580 (1075)
..|+|.|+|.|.|..+...+. ..+.|.. ..+|.+...+....+.+|+.++|.|.+.+.|.|
T Consensus 150 ~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~------------------~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p 211 (289)
T 3mjg_X 150 IFEDRSYICKTTIGDREVDSDAYYVYRLQ------------------VSSINVSVNAVQTVVRQGENITLMCIVIGNEVV 211 (289)
T ss_dssp CCCSSEEEEEEEETTEEEECCCEEEEECC------------------CCCCCCEEEESCSEEETTSCEEEEEEEESCSSB
T ss_pred eccCcEEEEEEEeCCceeeeeeEEEEecC------------------CCCCCcEEeCCcceeEcCCCEEEEEEECCCCCc
Confidence 568999999999887765443 3455431 134555555566789999999999999998877
Q ss_pred ceEEEEeCCeEEecCCcEEEEEc----CCceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEEeCC
Q psy16863 581 RSIYWYNKEGVVEASDKYHIMAD----GLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHVLMP 646 (1075)
Q Consensus 581 ~~v~W~~~~~~i~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p 646 (1075)
.+.|+++++............. ......|.|.+++.+|+|.|+|.|.|..|.... ...|.|...
T Consensus 212 -~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~-~~~l~v~~~ 279 (289)
T 3mjg_X 212 -NFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQD-EKAINITVV 279 (289)
T ss_dssp -EEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEE-EEEEEEEEE
T ss_pred -ceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCcee-EEEEEEEEE
Confidence 8999987764332211111111 123468999999999999999999999999774 456666543
No 89
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.94 E-value=1.4e-26 Score=254.80 Aligned_cols=282 Identities=14% Similarity=0.097 Sum_probs=176.9
Q ss_pred cCCeeEEEEEEEEEeecCCCcccceeecceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCCceeccCcEEE
Q psy16863 115 NESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFGNRFRA 194 (1075)
Q Consensus 115 n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~~~~~~~~~~~ 194 (1075)
+.+|.+.......++....++|.|...+. ..|.+|++++|.|.+.+. .+.+.|+++|..+....
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-----------~~~~~W~k~g~~~~~~~---- 67 (316)
T 3vh8_G 4 HHHGSGSDDDDKGSHMGGQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-----------FNNFMLYKEDRIHIPIF---- 67 (316)
T ss_dssp --------------------CCEEEEESC-SEEETTSCEEEEEEBTTB-----------CCSEEEEESSCSSSCHH----
T ss_pred ccCCCCCCCcccccccCCCCCCEeeccCC-CccCCCCCEEEEEEccCC-----------CceEEEEeCCCccceee----
Confidence 34444433333334433345677766665 678899999999988653 36889999986543211
Q ss_pred EecCCeEEEEEceeccCCCeEEEEEEEcCc-----eeEEEEEEEeeeccCCCCCccccccccceeeccceeEEEEEecCC
Q psy16863 195 INRDGRTELNIRRVRRDDGGRYSVTASNES-----GYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSP 269 (1075)
Q Consensus 195 ~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~-----g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~g~~~~l~c~~~~~ 269 (1075)
........|.|.+++.+|+|.|+|.|.|.. +..+..+.|.|... +.+|.+...+. ..+.+|+.++|.|.+..
T Consensus 68 ~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~-~~~p~~~~~~~-~~v~~G~~v~L~C~~~~- 144 (316)
T 3vh8_G 68 HGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGN-HRKPSLLAHPG-PLVKSGERVILQCWSDI- 144 (316)
T ss_dssp HHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECS-SCCCEEEEESC-SEEETTCCEEEEEEESS-
T ss_pred cCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecC-CCCCeEEecCC-CccCCCCeEEEEEcCCC-
Confidence 011223479999999999999999998632 23345567777532 23455544433 34889999999998753
Q ss_pred CceEEEEecCCCeeeEEecCCCccccCCC-eEEEeeCCeEEEEEcccCCCCCEEEEEEEEeCCee-----EEEEEEEEEe
Q psy16863 270 TEIKCQFDLNNTIPFSFRAQGDHPIFGNR-FRAINRDGRTELNIRRVRRDDGGRYSVTASNESGY-----STAKFELSVE 343 (1075)
Q Consensus 270 ~~~~c~~~~~~~~~~~w~~~~~~~~~~~~-~~~~~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~g~-----~~~~~~l~V~ 343 (1075)
++..+.||+++........ ...........|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|.
T Consensus 145 ----------~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~ 214 (316)
T 3vh8_G 145 ----------MFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVT 214 (316)
T ss_dssp ----------CCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEE
T ss_pred ----------CCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEec
Confidence 3457888887765433211 11111223458999999999999999999998763 2555677776
Q ss_pred cCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcC-CEEEEEEcccCCCCceeEEE
Q psy16863 344 SQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDG-NFYFIDLSSVSLFDSGRWTC 422 (1075)
Q Consensus 344 ~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g-~~~~L~I~~v~~~d~G~Y~C 422 (1075)
. ...+|.+...+ ...+.+|++++|.|.+. .|.+.+.|+|+|..+...........+ ....|.|.+++ |+|.|+|
T Consensus 215 ~-~~~~p~i~~~~-~~~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C 289 (316)
T 3vh8_G 215 G-PYEKPSLSAQP-GPKVQAGESVTLSCSSR-SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRC 289 (316)
T ss_dssp C-SSCCCEEEEES-CSCCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEE
T ss_pred C-CCCCCeEEeCC-CCeecCCCcEEEEEECC-CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEE
Confidence 4 23456665544 34789999999999996 467899999999877532221112222 23579999999 9999999
Q ss_pred EEEeCCCc
Q psy16863 423 LAENAVGR 430 (1075)
Q Consensus 423 ~a~n~~g~ 430 (1075)
.|.|..+.
T Consensus 290 ~a~n~~~~ 297 (316)
T 3vh8_G 290 FGSFRHSP 297 (316)
T ss_dssp EEEBTTBT
T ss_pred EeecCCCc
Confidence 99997664
No 90
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.94 E-value=1.7e-26 Score=251.25 Aligned_cols=264 Identities=15% Similarity=0.180 Sum_probs=197.6
Q ss_pred CCCccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCccccCCCeEEEeeCCeEEEEEcccCCCCC
Q psy16863 241 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFGNRFRAINRDGRTELNIRRVRRDDG 320 (1075)
Q Consensus 241 ~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~d~ 320 (1075)
.+|.|...+.+..+.+|+.++|.|.+.+. +.|++.+. .++.+...+....|.|.+++.+|+
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~--------------v~W~~~~~-----~~~~~~~~~~~~~L~i~~~~~~d~ 63 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS--------------VEWDGPPS-----PHWTLYSDGSSSILSTNNATFQNT 63 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC--------------CCBCCCCC-----SSCEECCBTTEEEEEESSCCGGGC
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc--------------eEEccCCC-----CceEEeccCceEEEEEcccccccC
Confidence 46777788888999999999999987642 56664332 233444456677999999999999
Q ss_pred EEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCC-cEEEEEEC-CEecCCCCcEEE
Q psy16863 321 GRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTE-IKIHWYRN-DRKLEENKIYRT 398 (1075)
Q Consensus 321 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~-~~v~W~k~-g~~l~~~~~~~~ 398 (1075)
|.|+|.|.|..|..+..+.|.|.. .+..+...+....+.+|+++.|.|.+.+.+. +.|+|+++ +..+....++..
T Consensus 64 G~Y~C~~~n~~~~~~~~~~l~V~~---~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~ 140 (292)
T 4dkd_C 64 GTYRCTEPGDPLGGSAAIHLYVKD---PARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSF 140 (292)
T ss_dssp SCEEECCCC----CCEEECCEECC---SSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSCCEEC
T ss_pred EEEEEEEccCCCCcceEEEEEEcC---ccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCCcccc
Confidence 999999999888778888888874 1223455567788999999999999987322 78999998 566666666555
Q ss_pred EEcCCEEEEEEcccCCCCceeEEEEEEeCCCcee-eEEEEEeecCCCCCCCeeeeecceE-EecCCeEEEEEEEECCCC-
Q psy16863 399 QHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSH-CSCELSVLVPKAYKAPFFTKELEAI-LTEQGTVSLECKVMGIPT- 475 (1075)
Q Consensus 399 ~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~-~s~~l~V~~~~~~~~p~~~~~~~~~-~~~g~~v~l~C~~~g~p~- 475 (1075)
..++. |.|.+++.+|+|.|+|.|.|..|... ..+.|.|..... .+|.+...+... +.+|+.+.|.|.+.+.|+
T Consensus 141 ~~~~~---L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~-~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~ 216 (292)
T 4dkd_C 141 SPWHG---FTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIP-GPPALTLVPAELVRIRGEAAQIVCSASSVDVN 216 (292)
T ss_dssp CSSSC---CEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCC-SSCEEEEESSCBCCCSSSCEEEEEEEEESSSC
T ss_pred cCCce---EEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCC-CCCeEEccCCceeEecCCCEEEEEEecCCCCc
Confidence 44444 88999999999999999999877553 367777775321 245555554443 578999999999998775
Q ss_pred CeEEEEeCCEeccCCC-----------EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEecc
Q psy16863 476 PQLIWYKDNKKIKAGD-----------IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQ 530 (1075)
Q Consensus 476 ~~v~W~~~g~~l~~~~-----------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~ 530 (1075)
+.+.|++++..+.... ...|.|..+..+|+|.|+|.|.|..|....++.|.|.+.
T Consensus 217 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 282 (292)
T 4dkd_C 217 FDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVES 282 (292)
T ss_dssp CEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC---
T ss_pred eEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeC
Confidence 4789999998765322 237999999999999999999999999999998888743
No 91
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.94 E-value=3.8e-26 Score=232.36 Aligned_cols=177 Identities=20% Similarity=0.329 Sum_probs=143.7
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEec-CCCCeEEEEECCEEeecCCcEEEEEee-CcEEEEEEccccCCCCeEEEEEEE
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSI-SPEPKVSWFRDDQQVVESDNVKILKET-LGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g-~p~p~v~W~k~g~~i~~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
+|.|..++ +..+.+|+.+.|.|.+.+ .|.|.|+|+|||++|..+.++.+..+. .+.+.|.|.+++.+|+|.|+|.|.
T Consensus 3 ~p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 3 DPFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp ---CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CCeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 67777766 577899999999999974 799999999999999988888877643 467889999999999999999999
Q ss_pred eCCceEEEEEEEEEEecC----------------CCCCCeeeeecceeecCCCeEEEEEEEEcc-CCCeeEEEECCEEcC
Q psy16863 826 NDFGQSITSCFLKLNVPK----------------HYKKPKFLEELKAVLSEGGAVNLECKVIGV-PQPTLKWFKDGRELK 888 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~----------------~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~-p~p~v~W~k~g~~l~ 888 (1075)
| |.+...+.+.+.... ...+|.|...+...+.+|+.+.|.|.+.|. |.|.|+|+|||.+|.
T Consensus 82 N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~ 159 (207)
T 3rbs_A 82 D--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREIS 159 (207)
T ss_dssp E--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEEC
T ss_pred C--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECC
Confidence 9 666555554321100 012678877776568899999999999999 999999999999996
Q ss_pred CCC-------eeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEE
Q psy16863 889 AGD-------IHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLG 927 (1075)
Q Consensus 889 ~~~-------~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 927 (1075)
.+. ...|.+......|+|.|+|.|.|.+|.+++++.|.+
T Consensus 160 ~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 160 VDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp CCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred CCCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 542 345888888899999999999999999999998865
No 92
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.94 E-value=1e-25 Score=240.81 Aligned_cols=250 Identities=16% Similarity=0.175 Sum_probs=183.4
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEec-CCCc--EEEEEECCEecCCCCcEEEEEcCCEEE-EEEcccCCCCce--eE
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRS-PTEI--KIHWYRNDRKLEENKIYRTQHDGNFYF-IDLSSVSLFDSG--RW 420 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g-~p~~--~v~W~k~g~~l~~~~~~~~~~~g~~~~-L~I~~v~~~d~G--~Y 420 (1075)
+.+|.+.. +..+.+|++++|.|.+.| .|.+ .|+|+|+|..+.. .+..++.... ..+..++.+|+| .|
T Consensus 4 ~~~p~~~~---~~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~~~~~~~~~~~~~~d~g~g~Y 76 (265)
T 2oz4_A 4 ATPPQLVS---PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTYGNDSFSAKASVSVTAEDEGTQRL 76 (265)
T ss_dssp SSCCEEEC---CSEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEECSSEEEEEEEEEECGGGCEEEEE
T ss_pred CCCCcccc---CceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEeeCCCeEEEEeecccccccCCcceE
Confidence 34555543 347899999999999998 7766 9999999998865 2334444322 222233777887 59
Q ss_pred EEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccC-CCEEEEEeCC
Q psy16863 421 TCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKA-GDIFALTANP 499 (1075)
Q Consensus 421 ~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~-~~~~~l~i~~ 499 (1075)
+|.|.|..|....++.|.|...|. |.+... ...+.+|+.+.|.|.+. |.+.++| +|..+.. +....|.+..
T Consensus 77 ~C~a~n~~~~~~~~~~l~V~~~p~---p~~~~~-~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~~~~~l~i~~ 148 (265)
T 2oz4_A 77 TCAVILGNQSQETLQTVTIYSFPA---PNVILT-KPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLGPRAQLLLKA 148 (265)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCC---CEEEES-CSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCSSEECCEEEC
T ss_pred EEEEecCCCCcEEEEEEEEeCCCC---ceeecC-CceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCCCcEEEEEcc
Confidence 999999999988888999876543 344432 34578899999999998 8899999 8888753 4566788888
Q ss_pred CCCCCcEEEEEEEEecc-eeeE---EEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEe
Q psy16863 500 KDPSSLGTYTCEAVNCM-GAAF---STSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVL 575 (1075)
Q Consensus 500 ~~~~d~G~Y~C~a~n~~-g~~~---~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~ 575 (1075)
...+|+|.|+|.|.|.. |... ....|.|..++. ......+.+..+.+|+.++|.|.+.
T Consensus 149 ~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~------------------~~~~~~p~~~~v~~g~~~~l~C~~~ 210 (265)
T 2oz4_A 149 TPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPR------------------LDERDCPGNWTWPENSQQTPMCQAW 210 (265)
T ss_dssp CGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEE------------------CCGGGSCSEEEEETTCEECCCCCCE
T ss_pred ccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCc------------------cccccCCCccEEcCCCeEEEEeECc
Confidence 99999999999999655 6655 556677763211 1111224567889999999999999
Q ss_pred cCCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEEeC
Q psy16863 576 VPPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHVLM 645 (1075)
Q Consensus 576 ~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~ 645 (1075)
|.|.| .+.|++++..+. ..+ .| ..++.+|+|.|+|.|.|..|... ....|.|..
T Consensus 211 g~P~p-~i~W~~~~~~~~--------~~g----~~--~~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~V~~ 264 (265)
T 2oz4_A 211 GNPLP-ELKCLKDGTFPL--------PIG----ES--VTVTRDLEGTYLCRARSTQGEVT-REVTVNVLS 264 (265)
T ss_dssp EESCC-EEEEEETTTEEC--------CTT----SC--EECCGGGCEEEEEEEEETTEEEE-EEEEEEEEC
T ss_pred cCCCC-eEEEEECCcccC--------CCC----cE--EEeehhhCeEEEEEEECCCCcEE-EEEEEEEec
Confidence 99988 899999988322 122 11 24788999999999999998865 345666654
No 93
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.94 E-value=3.6e-26 Score=253.65 Aligned_cols=267 Identities=14% Similarity=0.179 Sum_probs=189.6
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecC----CCcEEEEEECCE--e-------------c--CCCCcEEEE-EcCCEEE
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSP----TEIKIHWYRNDR--K-------------L--EENKIYRTQ-HDGNFYF 406 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~----p~~~v~W~k~g~--~-------------l--~~~~~~~~~-~~g~~~~ 406 (1075)
++.++..+..+.+.+|++++|.|.+.+. +.+.|.|+|++. . + ....++.+. .......
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 93 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGT 93 (331)
T ss_dssp -------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCC
T ss_pred CcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCce
Confidence 4455666778899999999999999776 456899999651 1 1 122344332 1122345
Q ss_pred EEEcccCCCCceeEEEE-EEeCCCceeeEEEEEeecCCCCCCCeee-eecceEEecC---CeEEEEEE-EECCCCCeEEE
Q psy16863 407 IDLSSVSLFDSGRWTCL-AENAVGRSHCSCELSVLVPKAYKAPFFT-KELEAILTEQ---GTVSLECK-VMGIPTPQLIW 480 (1075)
Q Consensus 407 L~I~~v~~~d~G~Y~C~-a~n~~g~~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g---~~v~l~C~-~~g~p~~~v~W 480 (1075)
|.|.+++.+|+|.|+|. +.|..|.....+.|.|..+|.. .+. ......+.+| +.+.|.|. +.+.|.+.++|
T Consensus 94 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~---~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W 170 (331)
T 3u83_A 94 IRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTN---WIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSW 170 (331)
T ss_dssp EEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEE---EEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEE
T ss_pred EEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcc---eeecCCCceeecCCCccceEEEEEEecCCcCCceEEE
Confidence 99999999999999998 5666777778888888876532 111 1222336777 78999998 88999999999
Q ss_pred EeCCE--ec-----cCCCE----EEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCC
Q psy16863 481 YKDNK--KI-----KAGDI----FALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGP 549 (1075)
Q Consensus 481 ~~~g~--~l-----~~~~~----~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~ 549 (1075)
++++. .. ..... ..|.+..+...|+|.|+|.|.|..|....++.|.|..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~------------------- 231 (331)
T 3u83_A 171 ETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYE------------------- 231 (331)
T ss_dssp EESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEE-------------------
T ss_pred EcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecC-------------------
Confidence 99532 21 11221 35888888999999999999999999888888877632
Q ss_pred CCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEeCCeEEecCCcEEEEEcCCceEEEEEe-eeeecCCceEEEEEE
Q psy16863 550 APIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKEGVVEASDKYHIMADGLGGYSIEIN-YLEAVDDGEWKCVAT 628 (1075)
Q Consensus 550 ~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~-~~~~~d~G~Y~C~a~ 628 (1075)
|......+....+.+|+.++|.|.+.+.|.|..+.|+++++.+.... . ..++ .|.|. ++..+|+|.|+|.|.
T Consensus 232 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~--~-~~~~----~L~i~~~v~~~d~G~Y~C~a~ 304 (331)
T 3u83_A 232 PEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGV--E-AQNR----TLFFKGPINYSLAGTYICEAT 304 (331)
T ss_dssp EEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE--E-EETT----EEEECSCCCGGGCEEEEEEEE
T ss_pred CeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccc--e-ecCc----EEEEeCCCccccCeEEEEEEE
Confidence 22223344555688899999999999999884499999998875442 1 2222 79999 999999999999999
Q ss_pred CCCCceeeeeEEEEEeC
Q psy16863 629 SSSGVKQFSAAYVHVLM 645 (1075)
Q Consensus 629 n~~g~~~~~~~~l~v~~ 645 (1075)
|..|... ....|.|..
T Consensus 305 N~~G~~~-~~~~l~V~~ 320 (331)
T 3u83_A 305 NPIGTRS-GQVEVNITE 320 (331)
T ss_dssp ETTEEEE-EEEEECCBC
T ss_pred eccccce-EEEEEEEec
Confidence 9999864 334454443
No 94
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.94 E-value=6.7e-26 Score=251.46 Aligned_cols=273 Identities=16% Similarity=0.190 Sum_probs=195.5
Q ss_pred CccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCc---------------c--ccCCCeEEE-ee
Q psy16863 243 PAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDH---------------P--IFGNRFRAI-NR 304 (1075)
Q Consensus 243 p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~---------------~--~~~~~~~~~-~~ 304 (1075)
+.++..+.++.+.+|+.++|.|.+..+.. ..+...+.|++++.. . ....++.+. ..
T Consensus 15 ~~~~~~~~~~~v~~G~~v~L~C~~~~~~~------~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~ 88 (331)
T 3u83_A 15 SQVVQVNDSMYGFIGTDVVLHCSFANPLP------SVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPS 88 (331)
T ss_dssp ------CEEEEEETTCCEEECCBCSSCCS------SCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCS
T ss_pred cceEEcCCcEEEEecCCEEEeeecCCCCC------CCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccC
Confidence 44566677789999999999998775410 012334566663211 1 013444443 12
Q ss_pred CCeEEEEEcccCCCCCEEEEEE-EEeCCeeEEEEEEEEEecCCCCCCeee--eecCceeeccC---CeEEEEEE-EecCC
Q psy16863 305 DGRTELNIRRVRRDDGGRYSVT-ASNESGYSTAKFELSVESQVPDAPAFI--RRLHDIAVKVG---TRARLLVE-IRSPT 377 (1075)
Q Consensus 305 ~~~~~L~I~~~~~~d~G~Y~C~-a~n~~g~~~~~~~l~V~~~~~~~p~~~--~~~~~~~v~~G---~~v~l~C~-~~g~p 377 (1075)
.+..+|.|.+++.+|+|.|+|. +.|..|..+..+.|.|.. +|.+. .......+.+| +.+.|.|. ..+.|
T Consensus 89 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~----~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p 164 (331)
T 3u83_A 89 FTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMA----KPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKP 164 (331)
T ss_dssp SSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB----CCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBS
T ss_pred CCCceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEec----CCcceeecCCCceeecCCCccceEEEEEEecCCcC
Confidence 2345799999999999999998 566778888888999985 55552 34566788888 78999998 78899
Q ss_pred CcEEEEEECCEecCCCCcEEEEEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeec
Q psy16863 378 EIKIHWYRNDRKLEENKIYRTQHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKEL 454 (1075)
Q Consensus 378 ~~~v~W~k~g~~l~~~~~~~~~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~ 454 (1075)
.+.++|+|++....... .....++.. ..|.|.++..+|+|.|+|.|.|..|....++.|.|..+|. ......
T Consensus 165 ~~~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~----~~~~~~ 239 (331)
T 3u83_A 165 PSVVSWETRLKGEAEYQ-EIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPE----VTIEGF 239 (331)
T ss_dssp CCEEEEEESSCCEEEEE-EEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEE----EEEECC
T ss_pred CceEEEEcCCCCccccc-eeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCe----EEEecC
Confidence 99999999642221100 011112222 3688999999999999999999999888888888876653 122222
Q ss_pred -ceEEecCCeEEEEEEEECCCCCe-EEEEeCCEeccCCCE---EEEEeC-CCCCCCcEEEEEEEEecceeeEEEEEEEEe
Q psy16863 455 -EAILTEQGTVSLECKVMGIPTPQ-LIWYKDNKKIKAGDI---FALTAN-PKDPSSLGTYTCEAVNCMGAAFSTSRVIAR 528 (1075)
Q Consensus 455 -~~~~~~g~~v~l~C~~~g~p~~~-v~W~~~g~~l~~~~~---~~l~i~-~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~ 528 (1075)
...+.+|+.+.|.|.+.|.|.+. |.|++++..+..... ..|.|. .+..+|+|.|+|.|.|..|....++.|.|.
T Consensus 240 ~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 319 (331)
T 3u83_A 240 DGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNIT 319 (331)
T ss_dssp CSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCB
T ss_pred CCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccceecCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEe
Confidence 23377899999999999999997 999999998876532 268898 899999999999999999999998888887
Q ss_pred cc
Q psy16863 529 GQ 530 (1075)
Q Consensus 529 ~~ 530 (1075)
..
T Consensus 320 ~~ 321 (331)
T 3u83_A 320 EA 321 (331)
T ss_dssp C-
T ss_pred cc
Confidence 43
No 95
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.94 E-value=2.2e-25 Score=226.42 Aligned_cols=183 Identities=22% Similarity=0.344 Sum_probs=157.8
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecC-CcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVES-DNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
.||.|...+.+..+.+|+.+.|.|.+.+.|.+.++|+|+|.++... .++.+.....+.+.|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 5899999999999999999999999999999999999999998754 567776666677899999999999999999999
Q ss_pred eCCceEEEEEEEEEEecCCCCCCeeeeecce-eecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCe---------eEE
Q psy16863 826 NDFGQSITSCFLKLNVPKHYKKPKFLEELKA-VLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDI---------HKI 895 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~-~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~---------~~i 895 (1075)
|..|....++.|.|..++.+..|.+...+.. .+.+|+.++|.|.+.|.|.|.|+|+|+|..+..+.+ ..|
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L 162 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSL 162 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEE
T ss_pred ECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEE
Confidence 9999998899999998877666655443332 367899999999999999999999999999875543 355
Q ss_pred EECC-CCceeeEEEEEEEEeCCeeEEEEEEEEEec
Q psy16863 896 ISGE-DGTCCLGIYTCEAHNCMGTTSSSAALLGFE 929 (1075)
Q Consensus 896 ~~~~-~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 929 (1075)
.+.. ....|+|.|+|.|.|.+|..+.++.|.|.+
T Consensus 163 ~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~d 197 (197)
T 2j8h_A 163 VFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (197)
T ss_dssp ECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEeC
Confidence 6666 778899999999999999999999998863
No 96
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.94 E-value=5.3e-25 Score=241.05 Aligned_cols=262 Identities=20% Similarity=0.261 Sum_probs=205.6
Q ss_pred CCCccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCcccc-CCCeEEEe-eCCeEEEEEcccCCC
Q psy16863 241 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIF-GNRFRAIN-RDGRTELNIRRVRRD 318 (1075)
Q Consensus 241 ~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~-~~~~~~L~I~~~~~~ 318 (1075)
.+|.|...+.+..+.+|+.++|.|.+.+ .+...+.|++++..+.. +.++.+.. .++...|.|.+++.+
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g----------~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 72 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTG----------HPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDD 72 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEEC----------SSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGG
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeC----------CCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChh
Confidence 4688888899999999999999887754 44567889887766554 45666554 456679999999999
Q ss_pred CCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCee-----eeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCC
Q psy16863 319 DGGRYSVTASNESGYSTAKFELSVESQVPDAPAF-----IRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEEN 393 (1075)
Q Consensus 319 d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~-----~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~ 393 (1075)
|+|.|+|.|.|..|..+..+.|.|.. +|.+ +..+....+.+|+.+.|.|.+.|.|.+.|.|+|+|..+..+
T Consensus 73 d~G~Y~C~a~n~~g~~~~~~~l~V~~----~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~ 148 (305)
T 2nzi_A 73 DATVYQVRATNQGGSVSGTASLEVEV----PAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN 148 (305)
T ss_dssp GCSEEEEEEEETTEEEEEEEEEEECE----EEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSS
T ss_pred hCeEEEEEEEcCCCCccceEEEEEec----CCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCC
Confidence 99999999999999988888888875 3333 22335678899999999999999999999999999999888
Q ss_pred CcEEEEEcCCEEEEEEcc-cCCCCceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeec----ceE-E------ecC
Q psy16863 394 KIYRTQHDGNFYFIDLSS-VSLFDSGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKEL----EAI-L------TEQ 461 (1075)
Q Consensus 394 ~~~~~~~~g~~~~L~I~~-v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~----~~~-~------~~g 461 (1075)
.++.+...+....|.|.+ +..+|+|.|+|.|.|..|....++.|.|..+|. +|....-. ..+ + ..|
T Consensus 149 ~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~--~p~~~~~~~~~~~~v~l~w~~p~~~g 226 (305)
T 2nzi_A 149 GHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPD--PPRGVKVSDVSRDSVNLTWTEPASDG 226 (305)
T ss_dssp SSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCC--CCEEEEEESCCSSCEEEEEECCSCCS
T ss_pred CcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCC--CCCCceeeeccCCEEEEEEcCCccCC
Confidence 888887777778899999 999999999999999999998888888886653 23221100 000 1 224
Q ss_pred CeEEEEEEEECCCCCeEEEEeCCEeccCCCEEEEEeCCCCCCCcEEEEEEEEecceeeEEE
Q psy16863 462 GTVSLECKVMGIPTPQLIWYKDNKKIKAGDIFALTANPKDPSSLGTYTCEAVNCMGAAFST 522 (1075)
Q Consensus 462 ~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 522 (1075)
+...+.|.+...|.+...|.+.+... ...+.+.++...+.|.|+|.|.|..|....+
T Consensus 227 ~~~i~~y~v~~~~~~~~~w~~~~~~~----~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S 283 (305)
T 2nzi_A 227 GSKITNYIVEKCATTAERWLRVGQAR----ETRYTVINLFGKTSYQFRVIAENKFGLSKPS 283 (305)
T ss_dssp BSCEEEEEEEEEETTSCCEEEEEEES----SSEEEECSCCSSCEEEEEEEEEETTEECCCC
T ss_pred CCceeEEEEEEecCCCCccEECcccc----CceEEecCCCCCCeEEEEEEEEeCCcccCCc
Confidence 44566777776677777888766554 3367889999999999999999999977544
No 97
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.93 E-value=1.8e-24 Score=222.51 Aligned_cols=184 Identities=22% Similarity=0.390 Sum_probs=155.3
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEee-cCCcEEEEEeeCcEEEEEEccccC-CCCeEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVV-ESDNVKILKETLGVCHLKIHALEV-ADQAEWKCIA 824 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~-~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C~A 824 (1075)
.||.|...+.+..+.+|+++.|.|.+.|.|.+.|+|+|+|..+. ...++.+.....+...|.|.+++. +|+|.|+|.|
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~ 84 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA 84 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEE
Confidence 68999999999999999999999999999999999999999997 567788776667778999999999 9999999999
Q ss_pred EeCCce-EEEEEEEEEEecCCCC--CCeeeeecce-eecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCe------eE
Q psy16863 825 TNDFGQ-SITSCFLKLNVPKHYK--KPKFLEELKA-VLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDI------HK 894 (1075)
Q Consensus 825 ~N~~G~-~~~s~~l~V~~~~~~~--~p~~~~~~~~-~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~------~~ 894 (1075)
.|..|. ...++.|.|..++... .|.+...+.. .+.+|+.++|.|.+.|.|.|.|+|+|+|..+..+.. ..
T Consensus 85 ~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~ 164 (212)
T 2yd1_A 85 ENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDGF 164 (212)
T ss_dssp ECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEETTE
T ss_pred EeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccCCe
Confidence 999998 6778888888754322 2566554433 467899999999999999999999999999875321 14
Q ss_pred EEECCCCceeeEEEEEEEEeCCeeEEEE-EEEEEecC
Q psy16863 895 IISGEDGTCCLGIYTCEAHNCMGTTSSS-AALLGFED 930 (1075)
Q Consensus 895 i~~~~~~~~d~G~Y~C~a~N~~G~~~~~-~~l~v~~~ 930 (1075)
|.+......|+|.|+|.|.|.+|...+. +.|.|...
T Consensus 165 L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~ 201 (212)
T 2yd1_A 165 LQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVR 201 (212)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred EEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEec
Confidence 6667777889999999999999999875 78888654
No 98
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.93 E-value=3e-24 Score=220.69 Aligned_cols=182 Identities=23% Similarity=0.343 Sum_probs=147.4
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccc-cCCCCeEEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHAL-EVADQAEWKCIAT 825 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~-~~~D~G~Y~C~A~ 825 (1075)
.||.|...+.+..+.+|+.+.|.|.+.|.|.+.|+|+|+|..+..+....+.........|.|.++ +.+|+|.|+|.|.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~ 84 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVAS 84 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEE
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEE
Confidence 588999999999999999999999999999999999999999976654444444345678999999 4999999999999
Q ss_pred eCCceEEEEEEEEEEecCCC--CCCeeeeecce-eecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCC-----------
Q psy16863 826 NDFGQSITSCFLKLNVPKHY--KKPKFLEELKA-VLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGD----------- 891 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~~~--~~p~~~~~~~~-~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~----------- 891 (1075)
|..|....++.|.|..++.. ..|.+...+.. .+.+|+.++|.|.+.|.|.|.|+|+|||.++..+.
T Consensus 85 n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~ 164 (212)
T 2yd6_A 85 NNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSE 164 (212)
T ss_dssp ETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEET
T ss_pred cCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecC
Confidence 99999888899999875432 23555544433 46789999999999999999999999999987541
Q ss_pred -eeEEEECCCCceeeEEEEEEEEeCCeeEEEE-EEEEEe
Q psy16863 892 -IHKIISGEDGTCCLGIYTCEAHNCMGTTSSS-AALLGF 928 (1075)
Q Consensus 892 -~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~-~~l~v~ 928 (1075)
...|.+......|+|.|+|.|.|.+|...++ +.|.+.
T Consensus 165 ~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~ 203 (212)
T 2yd6_A 165 SIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVR 203 (212)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEE
Confidence 2566777778889999999999999998754 555554
No 99
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.92 E-value=6.2e-24 Score=215.72 Aligned_cols=181 Identities=22% Similarity=0.378 Sum_probs=152.1
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+.+..+.+|+++.|.|.+.+.|.+.+.|+|+|..+..+.++.+... .....|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 6 EAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSD-GRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp EEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEES-SSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeC-CCEEEEEEecCCccCCEEEEEEEEC
Confidence 588898888999999999999999999999999999999999988888877654 4567899999999999999999999
Q ss_pred CCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCe---------eEEEE
Q psy16863 827 DFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDI---------HKIIS 897 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~---------~~i~~ 897 (1075)
..|....+..|.|..++.+... ........+.+|+.+.|.|.+.|.|.|.++|+|||..+..+.+ ..|.+
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i 163 (197)
T 3lcy_A 85 EVGEVETSSKLLLQATPQFHPG-YPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVM 163 (197)
T ss_dssp SSCEEEEEEEEEEEEEEEECTT-SCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEE
T ss_pred CCCceeEEEEEEEEcCCCCCCC-ccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEE
Confidence 9999988999998876543221 1111122366899999999999999999999999999986654 34556
Q ss_pred CCCCc-eeeEEEEEEEEeCCeeEEEEEEEEEec
Q psy16863 898 GEDGT-CCLGIYTCEAHNCMGTTSSSAALLGFE 929 (1075)
Q Consensus 898 ~~~~~-~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 929 (1075)
..... .|+|.|+|.|.|.+|..+.++.|.|.+
T Consensus 164 ~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 164 KNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp SSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred ccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 66654 799999999999999999999998865
No 100
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.92 E-value=4.7e-24 Score=215.98 Aligned_cols=178 Identities=30% Similarity=0.500 Sum_probs=148.1
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCC--cEEEEEeeCcEEEEEEccccCCCCeEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESD--NVKILKETLGVCHLKIHALEVADQAEWKCIA 824 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~--~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A 824 (1075)
.+|.|...+.+..+.+|+++.|.|.+.|.|.+.++|+|+|..+.... ++.+.. ..+...|.|.+++.+|+|.|+|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISF-SDGRAKLTIPAVTKANSGRYSLKA 82 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEE-ETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEe-CCCEEEEEECCCCcccCEEEEEEE
Confidence 57889988889999999999999999999999999999999987654 555543 345789999999999999999999
Q ss_pred EeCCceEEEEEEEEEEecCCCCCCeeeeecce-eecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCee---------E
Q psy16863 825 TNDFGQSITSCFLKLNVPKHYKKPKFLEELKA-VLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDIH---------K 894 (1075)
Q Consensus 825 ~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~-~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~~---------~ 894 (1075)
.|..|....++.|.|..+. .+|.+...+.. .+.+|+.++|.|.+.|.|.|.++|+|||.++..+.++ .
T Consensus 83 ~n~~~~~~~~~~l~v~~~~--~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 160 (194)
T 2a38_A 83 TNGSGQATSTAELLVKAET--APPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYS 160 (194)
T ss_dssp EETTEEEEEEEEEEEECCC--EEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEE
T ss_pred EcCCceEeEEEEEEEccCC--CCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEE
Confidence 9999998888888887421 23445444433 4779999999999999999999999999999866543 3
Q ss_pred EEECCCCceeeEEEEEEEEeCCeeEEEEEEEEE
Q psy16863 895 IISGEDGTCCLGIYTCEAHNCMGTTSSSAALLG 927 (1075)
Q Consensus 895 i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 927 (1075)
|.+......|+|.|+|.|.|..|..++++.|.|
T Consensus 161 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 161 LLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 445555667899999999999999999888876
No 101
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.92 E-value=3e-24 Score=238.86 Aligned_cols=277 Identities=14% Similarity=0.155 Sum_probs=175.2
Q ss_pred ecCceeeccCCeEEEEEEEecC--CCcEEEEEEC--CEec-----------------CCCCcEEEEEc--CCEEEEEEcc
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSP--TEIKIHWYRN--DRKL-----------------EENKIYRTQHD--GNFYFIDLSS 411 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~--p~~~v~W~k~--g~~l-----------------~~~~~~~~~~~--g~~~~L~I~~ 411 (1075)
.+..+.+.+|++++|.|.+.+. +.+.|.|||+ |..+ ....|+.+..+ +....|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (344)
T 1za6_B 6 QSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSS 85 (344)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECC
Confidence 3456789999999999999886 3679999997 4322 11356666554 4567899999
Q ss_pred cCCCCceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeee-ecceEEecCCeEEEEEEEECC-CC-CeEEEEeCCEecc
Q psy16863 412 VSLFDSGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTK-ELEAILTEQGTVSLECKVMGI-PT-PQLIWYKDNKKIK 488 (1075)
Q Consensus 412 v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~v~l~C~~~g~-p~-~~v~W~~~g~~l~ 488 (1075)
++.+|+|.|+|.|.|..+.....+.|.|...+. .+|.+.. .+...+.+|+.++|.|.+.|. |. +.|+|+|+|..+.
T Consensus 86 v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~-~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~ 164 (344)
T 1za6_B 86 LRSEDTAVYFCTRSLNMAYWGQGTLVTVSSAST-KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSG 164 (344)
T ss_dssp CCGGGCEEEEEEETTTTCEECCCEEEEECSSCC-BCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTT
T ss_pred CCcccCEEEEEEEecCcceecCcEEEEEecCCC-CCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCc
Confidence 999999999999999665555567788874322 2343332 222335689999999999986 65 6999999997641
Q ss_pred ---------CCCEE----EEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEecccc----ccCCCCCCcCCCCCCCCCC
Q psy16863 489 ---------AGDIF----ALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQS----FLDNDDVPFNSLMPPGPAP 551 (1075)
Q Consensus 489 ---------~~~~~----~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~----~~~~~~~~~~~~~~~~~~~ 551 (1075)
.+..+ .|.|..+..+| |.|+|.|.|..|.......+.+..... .................+|
T Consensus 165 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P 243 (344)
T 1za6_B 165 VHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREP 243 (344)
T ss_dssp EEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCC
T ss_pred eeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCC
Confidence 22222 57787777777 999999999988654444332110000 0000000000000011233
Q ss_pred eeeeeccceEeecCCeEEEEEEEecC-CCCceEEEEeCCeEEecCCcEEEEEcCCce----EEEEEeeeeecCCceEEEE
Q psy16863 552 IFIKEVENVKAKIGTSAILECQVLVP-PWPRSIYWYNKEGVVEASDKYHIMADGLGG----YSIEINYLEAVDDGEWKCV 626 (1075)
Q Consensus 552 ~~~~~~~~~~v~~G~~~~L~C~~~~~-p~p~~v~W~~~~~~i~~~~~~~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~ 626 (1075)
.+...........|..++|.|.+.|. |....+.|+++|..+.......+..++.+. ..|.|.....+|+|.|+|.
T Consensus 244 ~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~ 323 (344)
T 1za6_B 244 QVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCS 323 (344)
T ss_dssp EEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEE
T ss_pred EEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEE
Confidence 33322222223356679999999985 433489999999877543222222222222 2466666667789999999
Q ss_pred EECCCCc
Q psy16863 627 ATSSSGV 633 (1075)
Q Consensus 627 a~n~~g~ 633 (1075)
|.|....
T Consensus 324 a~~~~l~ 330 (344)
T 1za6_B 324 VMHEALH 330 (344)
T ss_dssp EECTTST
T ss_pred EEcCCCC
Confidence 9998754
No 102
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.91 E-value=2.2e-24 Score=237.71 Aligned_cols=236 Identities=13% Similarity=0.190 Sum_probs=152.9
Q ss_pred CeEEEEEEEecC-C-CCeEEEEECCEEcCCCC----------eEEEe------e--cCCCceEEEEEEecCceEEEEEEE
Q psy16863 666 GLVSFECKVVGF-P-TPTLQWFKDNEELKPGD----------VYQLT------G--TSSLGSYCCVAKNVMGKAESSTQL 725 (1075)
Q Consensus 666 ~~~~l~C~v~g~-p-~p~v~W~k~g~~l~~~~----------~~~~~------~--~~d~G~Y~C~a~N~~g~~~~~~~l 725 (1075)
+.+.|.|.+.|. | .+.|+|+|+|..+..+. .+.+. . .+|.|.|+|.|.|..+....++.+
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 104 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKK 104 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeec
Confidence 599999999986 4 47899999999886432 22211 1 138899999999988765443321
Q ss_pred EEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecC-CCC---eEEEEECC-EEeecCCcEEEEEe
Q psy16863 726 TIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSIS-PEP---KVSWFRDD-QQVVESDNVKILKE 800 (1075)
Q Consensus 726 ~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~-p~p---~v~W~k~g-~~i~~~~~~~~~~~ 800 (1075)
.+... ...++.++..+....+.+|+++.|.|.+.|. |.| .|+|+|++ ..+........ ..
T Consensus 105 ~~~~~--------------~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~-~~ 169 (323)
T 2wqr_A 105 CADSN--------------PRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEE-KQ 169 (323)
T ss_dssp CCCSS--------------GGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEE-EC
T ss_pred CCCCC--------------CCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCc-cC
Confidence 11100 0023344555555568899999999999985 556 99999975 54433222111 01
Q ss_pred eC----cEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEec-CCCCCCeeee-ecceeecCCCeEEEEEEEEccC
Q psy16863 801 TL----GVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVP-KHYKKPKFLE-ELKAVLSEGGAVNLECKVIGVP 874 (1075)
Q Consensus 801 ~~----~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~-~~~~~p~~~~-~~~~~~~~g~~~~L~C~v~g~p 874 (1075)
.. ....|.|.+++.+|+|.|+|.|.|..+.... .+.|... ....+|.+.. ........|+.++|.|.+.|.+
T Consensus 170 ~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~--~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~ 247 (323)
T 2wqr_A 170 RNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRAL--MRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFM 247 (323)
T ss_dssp TTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCE--EEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEB
T ss_pred CCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCe--eeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeee
Confidence 11 1347999999999999999999998754322 3344221 1123444322 1111122499999999999854
Q ss_pred C-C-eeEEEECCEEcCCCCe----------------eEEEECCCCceeeEEEEEEEEeCCee
Q psy16863 875 Q-P-TLKWFKDGRELKAGDI----------------HKIISGEDGTCCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 875 ~-p-~v~W~k~g~~l~~~~~----------------~~i~~~~~~~~d~G~Y~C~a~N~~G~ 918 (1075)
+ + .|+|+|||.+|..+.. ..|.+......|+|.|+|.|.|..+.
T Consensus 248 p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 248 PEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp SSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred CCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 3 3 7999999999865421 12333333446789999999999876
No 103
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.91 E-value=1.9e-23 Score=212.34 Aligned_cols=176 Identities=19% Similarity=0.314 Sum_probs=140.7
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEe-cCCCcEEEEEECCEecCCCCcEEEEEcC--CEEEEEEcccCCCCceeEEEEEE
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIR-SPTEIKIHWYRNDRKLEENKIYRTQHDG--NFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~-g~p~~~v~W~k~g~~l~~~~~~~~~~~g--~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
+|.|...+ +..+.+|+.+.|.|.+. +.|.+.|+|+|||++|..+.++.+..++ ..+.|.|.+++.+|+|.|+|.|.
T Consensus 3 ~p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 3 DPFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp ---CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CCeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 56676655 67899999999999995 4789999999999999988887777655 67789999999999999999999
Q ss_pred eCCCceeeEEEEEeecCC----------------CCCCCeeeeecceEEecCCeEEEEEEEECC-CCCeEEEEeCCEecc
Q psy16863 426 NAVGRSHCSCELSVLVPK----------------AYKAPFFTKELEAILTEQGTVSLECKVMGI-PTPQLIWYKDNKKIK 488 (1075)
Q Consensus 426 n~~g~~~~s~~l~V~~~~----------------~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~-p~~~v~W~~~g~~l~ 488 (1075)
| |.......+.+.... ...+|.|...+...+.+|+.+.|.|.+.|. |.|.|+|+|||++|.
T Consensus 82 N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~ 159 (207)
T 3rbs_A 82 D--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREIS 159 (207)
T ss_dssp E--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEEC
T ss_pred C--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECC
Confidence 9 555544443321100 012567766665568899999999999998 999999999999995
Q ss_pred CC-------CEEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEE
Q psy16863 489 AG-------DIFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIA 527 (1075)
Q Consensus 489 ~~-------~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v 527 (1075)
.+ ....|.|..+..+|+|.|+|.|.|..|.+.+++.|.+
T Consensus 160 ~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 160 VDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp CCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred CCCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 43 2347999999999999999999999999998887754
No 104
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.91 E-value=6.7e-24 Score=233.88 Aligned_cols=267 Identities=15% Similarity=0.136 Sum_probs=169.5
Q ss_pred CCCeeeeecCceeeccC--CeEEEEEEEecC-C-CcEEEEEECCEecCCCCcE--EEEEcCCE---EEEEEcccCCCCce
Q psy16863 348 DAPAFIRRLHDIAVKVG--TRARLLVEIRSP-T-EIKIHWYRNDRKLEENKIY--RTQHDGNF---YFIDLSSVSLFDSG 418 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G--~~v~l~C~~~g~-p-~~~v~W~k~g~~l~~~~~~--~~~~~g~~---~~L~I~~v~~~d~G 418 (1075)
.+|.+...+.......| +.+.|.|.+.|. | .+.|+|+|||..+..+... ....+|.. ..|.|.+...+|+|
T Consensus 6 ~~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g 85 (323)
T 2wqr_A 6 TPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDR 85 (323)
T ss_dssp CCCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTC
T ss_pred CCCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCC
Confidence 35555433333333344 699999999875 4 5799999999998755322 12223432 35788888888999
Q ss_pred eEEEEEEeCCCceeeEEEEEeecCCCCCCC-eeeeecce-EEecCCeEEEEEEEECC-CCC---eEEEEeCC-EeccCC-
Q psy16863 419 RWTCLAENAVGRSHCSCELSVLVPKAYKAP-FFTKELEA-ILTEQGTVSLECKVMGI-PTP---QLIWYKDN-KKIKAG- 490 (1075)
Q Consensus 419 ~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p-~~~~~~~~-~~~~g~~v~l~C~~~g~-p~~---~v~W~~~g-~~l~~~- 490 (1075)
.|+|.|.|..+....++.+.+.. ....| .+...+.. .+.+|+.+.|.|.+.|. |.+ .|+|+|++ ..+...
T Consensus 86 ~Y~C~a~n~~~~~~~~~~~~~~~--~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~ 163 (323)
T 2wqr_A 86 TYTCQVTYQGHTFEDSTKKCADS--NPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHST 163 (323)
T ss_dssp CEEEEEEETTEEEEEEECCCCCS--SGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCC
T ss_pred cEEEEEEeCCCCcceeeecCCCC--CCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCccccccc
Confidence 99999999877654333221111 11122 22332222 26789999999999985 556 89999975 444321
Q ss_pred --------C----EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeecc
Q psy16863 491 --------D----IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVE 558 (1075)
Q Consensus 491 --------~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (1075)
. ...|.|..+..+|+|.|+|.|.|..+.... .+.|... ... ..+|.+...+.
T Consensus 164 ~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~--~~~v~~~-------------~~~-~~~P~v~~~~~ 227 (323)
T 2wqr_A 164 RKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRAL--MRSTTKT-------------SGP-RAAPEVYAFAT 227 (323)
T ss_dssp CEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCE--EEEECCC-------------CSC-CBCCEEEEEEC
T ss_pred CCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCe--eeEEEcc-------------CCC-CCCCEEEEeCC
Confidence 1 126889888999999999999998753322 3333210 001 12333332222
Q ss_pred ceEeecCCeEEEEEEEec-CCCCceEEEEeCCeEEecCCcEEE-----EEcCC--ceEEEEEeeeeecCCceEEEEEECC
Q psy16863 559 NVKAKIGTSAILECQVLV-PPWPRSIYWYNKEGVVEASDKYHI-----MADGL--GGYSIEINYLEAVDDGEWKCVATSS 630 (1075)
Q Consensus 559 ~~~v~~G~~~~L~C~~~~-~p~p~~v~W~~~~~~i~~~~~~~~-----~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~ 630 (1075)
......|+.++|.|.+.+ .|.+..|.|++++..+.... +.. ..++. ....|.|..+..+|+|.|+|.|.|.
T Consensus 228 ~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~-~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~ 306 (323)
T 2wqr_A 228 PEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDAR-HSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHE 306 (323)
T ss_dssp CCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGG-EEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECT
T ss_pred ChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCc-eeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeC
Confidence 222223999999999998 44444899999999876432 211 11111 1236899999999999999999999
Q ss_pred CCc
Q psy16863 631 SGV 633 (1075)
Q Consensus 631 ~g~ 633 (1075)
.+.
T Consensus 307 ~~~ 309 (323)
T 2wqr_A 307 AAS 309 (323)
T ss_dssp TST
T ss_pred CCC
Confidence 875
No 105
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.90 E-value=1.2e-22 Score=206.28 Aligned_cols=182 Identities=22% Similarity=0.326 Sum_probs=154.1
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCC-CcEEEE-EcCCEEEEEEcccCCCCceeEEEEE
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEEN-KIYRTQ-HDGNFYFIDLSSVSLFDSGRWTCLA 424 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~-~~g~~~~L~I~~v~~~d~G~Y~C~a 424 (1075)
+.+|.|...+.+..+.+|+++.|.|.+.+.|.+.+.|+|+|..+... .++.+. ..+..+.|.|.+++.+|+|.|+|.|
T Consensus 2 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (197)
T 2j8h_A 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (197)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEE
T ss_pred CCCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEE
Confidence 35899999899999999999999999999999999999999998754 455554 3566678999999999999999999
Q ss_pred EeCCCceeeEEEEEeecCCCCCCCeeeeecc-eEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCC---------EEE
Q psy16863 425 ENAVGRSHCSCELSVLVPKAYKAPFFTKELE-AILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGD---------IFA 494 (1075)
Q Consensus 425 ~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~---------~~~ 494 (1075)
.|..|....++.|.|..++....|.+...+. ..+.+|+.+.|.|.+.|.|.+.+.|+|++..+..+. ...
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~ 161 (197)
T 2j8h_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTS 161 (197)
T ss_dssp EETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEE
T ss_pred EECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceE
Confidence 9999998888999998877655444333222 347889999999999999999999999999886543 357
Q ss_pred EEeCC-CCCCCcEEEEEEEEecceeeEEEEEEEEe
Q psy16863 495 LTANP-KDPSSLGTYTCEAVNCMGAAFSTSRVIAR 528 (1075)
Q Consensus 495 l~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~ 528 (1075)
|.|.. +..+|+|.|+|.|.|..|....++.|.|.
T Consensus 162 L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 162 LVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 88888 99999999999999999999888888875
No 106
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.90 E-value=1.3e-22 Score=205.55 Aligned_cols=173 Identities=23% Similarity=0.412 Sum_probs=140.8
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEe-cCCCCeEEEEECCEEeecCC--cEEEEEeeCc------EEEEEEccccCCCCe
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVS-ISPEPKVSWFRDDQQVVESD--NVKILKETLG------VCHLKIHALEVADQA 818 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~-g~p~p~v~W~k~g~~i~~~~--~~~~~~~~~~------~~~L~I~~~~~~D~G 818 (1075)
+|.|+..+.+..+.+|+++.|.|.+. |.|.+.++|+|+|..+.... ++.+.....+ ...|.|.+++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 78899999999999999999999999 99999999999999997663 3444322211 468999999999999
Q ss_pred EEEEEEEeCCceEEEE-EEEEEEecCCCCCCeeeeecc-eeecCCCeEEEEEEEEccCCC-eeEEEECCEEcCCC----C
Q psy16863 819 EWKCIATNDFGQSITS-CFLKLNVPKHYKKPKFLEELK-AVLSEGGAVNLECKVIGVPQP-TLKWFKDGRELKAG----D 891 (1075)
Q Consensus 819 ~Y~C~A~N~~G~~~~s-~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~p~p-~v~W~k~g~~l~~~----~ 891 (1075)
.|+|.|.|..|..... +.|.|..+ |.+...+. ..+.+|+.++|.|.+.|.|.| .|+|+|+|..+... .
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~ 156 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGL-----PYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGP 156 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCS-----CEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTSSC
T ss_pred EEEEEEEeCCCceecccEEEEEecC-----CeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCcCC
Confidence 9999999998876543 77777654 44443333 347789999999999999999 99999999998754 3
Q ss_pred eeEEEECCCCceeeEEEEEEEEeCCeeEE-EEEEEEE
Q psy16863 892 IHKIISGEDGTCCLGIYTCEAHNCMGTTS-SSAALLG 927 (1075)
Q Consensus 892 ~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~-~~~~l~v 927 (1075)
...|.+.... |+|.|+|.|.|.+|... .++.|.|
T Consensus 157 ~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 157 QRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp CEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 4566666554 79999999999999996 6888877
No 107
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.90 E-value=1.2e-23 Score=212.27 Aligned_cols=159 Identities=17% Similarity=0.237 Sum_probs=118.4
Q ss_pred eeeeecCCeEEEEEE---EecCCCCeEEEEECCEEeec-----------------CCcEEEEEeeCcEEEEEEccccCCC
Q psy16863 757 SCQATVNEEFKFTVQ---VSISPEPKVSWFRDDQQVVE-----------------SDNVKILKETLGVCHLKIHALEVAD 816 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~---v~g~p~p~v~W~k~g~~i~~-----------------~~~~~~~~~~~~~~~L~I~~~~~~D 816 (1075)
++++..|+.+.|.|. +.+.|.|.|+|||+|..+.. ..++.+. ...+.+.|.|.+++.+|
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D 80 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIH-RSANTFFLVVTAANISH 80 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEE-EETTEEEEEESSCCGGG
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEE-EcCCEEEEEEccCCHHH
Confidence 467899999999995 67889999999998743211 1233333 34457899999999999
Q ss_pred CeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecce-eecCCCeEEEEEEEEccCCCeeEEEECCEEcCC------
Q psy16863 817 QAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELKA-VLSEGGAVNLECKVIGVPQPTLKWFKDGRELKA------ 889 (1075)
Q Consensus 817 ~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~-~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~------ 889 (1075)
+|.|+|.|.|..|....++.|.|..|+ .+...+.. .+.+|+.++|.|.+.|.|.|.|+|+|++..+..
T Consensus 81 ~G~Y~C~a~n~~g~~~~~~~l~V~~p~-----~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~ 155 (203)
T 4fa8_A 81 DGNYLCRMKLGETEVTKQEHLSVVKPL-----TLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANG 155 (203)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEEEE-----EEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------
T ss_pred CeEEEEEEEcCCCcEEEEEEEEecCCc-----eeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccc
Confidence 999999999999999999999998654 33333332 377899999999999999999999987643321
Q ss_pred -------CCeeEEEECCCCceeeEEEEEEEEeCCeeEEE
Q psy16863 890 -------GDIHKIISGEDGTCCLGIYTCEAHNCMGTTSS 921 (1075)
Q Consensus 890 -------~~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~ 921 (1075)
|....+.+......|+|.|+|.|+|.+|++..
T Consensus 156 r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 156 GVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred eEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 11122223344557899999999999999875
No 108
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.90 E-value=7.6e-23 Score=227.55 Aligned_cols=266 Identities=12% Similarity=0.133 Sum_probs=174.7
Q ss_pred cceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCC--Ccee-----------------ccCcEEEEec--CCe
Q psy16863 142 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQG--DHPI-----------------FGNRFRAINR--DGR 200 (1075)
Q Consensus 142 ~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~--~~~~-----------------~~~~~~~~~~--~~~ 200 (1075)
+..+.+.+|++++|.|.+.+.. .+.+.+.|++++ ..+. ..+|+.+... .+.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~--------~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 78 (344)
T 1za6_B 7 SGAEVVKPGASVKISCKASGYT--------FTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSAST 78 (344)
T ss_dssp CCCEEECTTCCEEEEEEEESSC--------TTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTE
T ss_pred CCCeEEeCCCcEEEEEEcCCcc--------ccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCE
Confidence 3456788999999999887531 124567888763 2221 2457766543 456
Q ss_pred EEEEEceeccCCCeEEEEEEEcCceeEEEEEEEeeeccCCCCCccccccccceeeccceeEEEEEecCCCceEEEEecCC
Q psy16863 201 TELNIRRVRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNN 280 (1075)
Q Consensus 201 ~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~ 280 (1075)
..|+|.+++.+|+|.|+|.|.|..+.....+.|.|....+.+|.+........+.+|+.++|.|.+.+. .+
T Consensus 79 ~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~---------~P 149 (344)
T 1za6_B 79 AYVELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY---------FP 149 (344)
T ss_dssp EEEEECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEE---------BS
T ss_pred EEEEECCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeE---------EC
Confidence 799999999999999999999976665566778887444445554444444557799999998877532 12
Q ss_pred -CeeeEEecCCCcccc---------CCCeEEEeeCCeEEEEEcccCCCCCEEEEEEEEeCCeeEEEEEEEEEe-------
Q psy16863 281 -TIPFSFRAQGDHPIF---------GNRFRAINRDGRTELNIRRVRRDDGGRYSVTASNESGYSTAKFELSVE------- 343 (1075)
Q Consensus 281 -~~~~~w~~~~~~~~~---------~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~------- 343 (1075)
++.+.|++++..... +.++.. ...|+|.++..+| |.|+|.|.|..+.......+.+.
T Consensus 150 ~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~ 223 (344)
T 1za6_B 150 EPVTVSWNSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHT 223 (344)
T ss_dssp SCCCEEETTTTBCTTEEECCCEECTTSCEEE-----EEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC-----
T ss_pred CCeEEEEecCCccCceeECCCeECCCCCEEE-----EEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccc
Confidence 257788776643210 112221 1379999998888 99999999988764333333211
Q ss_pred -------------cCCCCCCeeeeecCceeeccCCeEEEEEEEecC-C-CcEEEEEECCEecCCCCcEE--EEEcCCE--
Q psy16863 344 -------------SQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSP-T-EIKIHWYRNDRKLEENKIYR--TQHDGNF-- 404 (1075)
Q Consensus 344 -------------~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~-p-~~~v~W~k~g~~l~~~~~~~--~~~~g~~-- 404 (1075)
.....+|.+..........+|..++|.|.+.|. | .+.|+|+|||..+....... ...+|..
T Consensus 224 ~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~ 303 (344)
T 1za6_B 224 CPPCGGGSSGGGSGGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFL 303 (344)
T ss_dssp ---------------CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEE
T ss_pred cCCCCCCccccccCCCCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEE
Confidence 112346666544333333456679999999884 4 47999999999886432222 2334443
Q ss_pred -EEEEEcccCCCCceeEEEEEEeCCCc
Q psy16863 405 -YFIDLSSVSLFDSGRWTCLAENAVGR 430 (1075)
Q Consensus 405 -~~L~I~~v~~~d~G~Y~C~a~n~~g~ 430 (1075)
..|.|.....+|.|.|+|.|.|....
T Consensus 304 ~s~l~i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 304 YSKLTVDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp EEEEEECHHHHHTTCEEEEEEECTTST
T ss_pred EEEEEEChHHccCCCeEEEEEEcCCCC
Confidence 34666666667899999999998654
No 109
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.90 E-value=2.7e-22 Score=202.64 Aligned_cols=172 Identities=27% Similarity=0.444 Sum_probs=141.7
Q ss_pred CCeEEeccc--eeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 748 APKFIEGLK--SCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 748 ~p~~~~~~~--~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
||.|..... +..+.+|+.+.|.|.+.|.|.+.+.|+|+|..+..+.++.+.. +...|.|.+++.+|+|.|+|.|.
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~ 78 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKG---SNTELTVRNIINSDGGPYVCRAT 78 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEET---TTTEEEECSCCGGGCEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeC---CeeEEEEecCChhcCcEEEEEEE
Confidence 666665543 5678899999999999999999999999999998887776542 22379999999999999999999
Q ss_pred eCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEEC--CEEcCCCC------------
Q psy16863 826 NDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKD--GRELKAGD------------ 891 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~--g~~l~~~~------------ 891 (1075)
|..|....++.|.|..+|. +.......+.+|+.++|.|.+.|.|.|.++|+|+ |..+..+.
T Consensus 79 ~~~~~~~~~~~l~V~~~p~-----~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (192)
T 2va4_A 79 NKAGEDEKQAFLQVFVQPH-----IIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQ 153 (192)
T ss_dssp ETTEEEEEEEEEEEEEEEE-----EEEECCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEE
T ss_pred ccccccceEEEEEEEccCc-----ccccCcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeec
Confidence 9999988888888876543 3333334466899999999999999999999999 77775421
Q ss_pred --eeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEE
Q psy16863 892 --IHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLG 927 (1075)
Q Consensus 892 --~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 927 (1075)
...|.+......|+|.|+|.|.|.+|..+.++.|.|
T Consensus 154 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 154 HGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp TTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred cCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 245667777788999999999999999998888876
No 110
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.90 E-value=1.9e-22 Score=204.68 Aligned_cols=181 Identities=22% Similarity=0.399 Sum_probs=155.6
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.+|.|...+.+..+.+|+++.|.|.+.+.|.+.+.|+|+|..+..+.++.+..++....|.|.+++.+|+|.|+|.|.|.
T Consensus 6 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 85 (197)
T 3lcy_A 6 EAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNE 85 (197)
T ss_dssp EEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECS
T ss_pred CCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECC
Confidence 47888888889999999999999999999999999999999999888998988898889999999999999999999999
Q ss_pred CCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCCE---------EEEEeC
Q psy16863 428 VGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGDI---------FALTAN 498 (1075)
Q Consensus 428 ~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~~---------~~l~i~ 498 (1075)
.|....+..|.|..+|..... ........+.+|+.+.|.|.+.|.|.+.+.|++++..+..+.+ ..|.|.
T Consensus 86 ~~~~~~~~~l~v~~~p~~~~~-~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~ 164 (197)
T 3lcy_A 86 VGEVETSSKLLLQATPQFHPG-YPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMK 164 (197)
T ss_dssp SCEEEEEEEEEEEEEEEECTT-SCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEES
T ss_pred CCceeEEEEEEEEcCCCCCCC-ccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEc
Confidence 999888888888876543221 1111223467899999999999999999999999999876543 468888
Q ss_pred CCCC-CCcEEEEEEEEecceeeEEEEEEEEec
Q psy16863 499 PKDP-SSLGTYTCEAVNCMGAAFSTSRVIARG 529 (1075)
Q Consensus 499 ~~~~-~d~G~Y~C~a~n~~g~~~~~~~v~v~~ 529 (1075)
.+.. +|+|.|+|.|.|..|....++.|.|.+
T Consensus 165 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 165 NVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp SCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred cccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 8884 899999999999999999998888863
No 111
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.90 E-value=3.3e-22 Score=202.38 Aligned_cols=189 Identities=28% Similarity=0.454 Sum_probs=161.9
Q ss_pred CCCccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCccccC--CCeEEEeeCCeEEEEEcccCCC
Q psy16863 241 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFG--NRFRAINRDGRTELNIRRVRRD 318 (1075)
Q Consensus 241 ~~p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~~~~--~~~~~~~~~~~~~L~I~~~~~~ 318 (1075)
.+|.|...+.+..+.+|+.++|.|.+.+ .+...+.|++++...... .++++...++...|.|.+++.+
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~----------~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 73 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISG----------FPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKA 73 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEE----------ESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGG
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEe----------cCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcc
Confidence 4677888888999999999999887653 345578898877655443 3677777788889999999999
Q ss_pred CCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEE
Q psy16863 319 DGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRT 398 (1075)
Q Consensus 319 d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~ 398 (1075)
|+|.|+|.|.|..|.....+.|.|.. ...+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+..+.++.+
T Consensus 74 d~G~Y~C~~~n~~~~~~~~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~ 152 (194)
T 2a38_A 74 NSGRYSLKATNGSGQATSTAELLVKA-ETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQI 152 (194)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEC-CCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEE
T ss_pred cCEEEEEEEEcCCceEeEEEEEEEcc-CCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEE
Confidence 99999999999999888888888874 23467777777888999999999999999999999999999999998888888
Q ss_pred EEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEee
Q psy16863 399 QHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVL 440 (1075)
Q Consensus 399 ~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~ 440 (1075)
..++..+.|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 153 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 153 SQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 888888899999999999999999999999998888777763
No 112
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.90 E-value=7e-22 Score=202.98 Aligned_cols=183 Identities=25% Similarity=0.474 Sum_probs=153.2
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecC-CCCcEEEEE-cCCEEEEEEcccCC-CCceeEEEE
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLE-ENKIYRTQH-DGNFYFIDLSSVSL-FDSGRWTCL 423 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~-~~~~~~~~~-~g~~~~L~I~~v~~-~d~G~Y~C~ 423 (1075)
..||.|...+.+..+.+|+++.|.|.+.|.|.+.|+|+|+|..+. ...++.+.. .+....|.|.+++. +|+|.|+|.
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 468999999999999999999999999999999999999999997 455666543 45567899999999 999999999
Q ss_pred EEeCCCc-eeeEEEEEeecCCCCC--CCeeeeecce-EEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCC-EE-----
Q psy16863 424 AENAVGR-SHCSCELSVLVPKAYK--APFFTKELEA-ILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGD-IF----- 493 (1075)
Q Consensus 424 a~n~~g~-~~~s~~l~V~~~~~~~--~p~~~~~~~~-~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~-~~----- 493 (1075)
|.|..|. ...++.|.|..++... .|.+...+.. .+.+|+.+.|.|.+.|.|.+.|+|++++..+.... ++
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~ 163 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDG 163 (212)
T ss_dssp EECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEETT
T ss_pred EEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccCC
Confidence 9999998 6778888888764322 2555555443 47789999999999999999999999999987532 21
Q ss_pred EEEeCCCCCCCcEEEEEEEEecceeeEEE-EEEEEec
Q psy16863 494 ALTANPKDPSSLGTYTCEAVNCMGAAFST-SRVIARG 529 (1075)
Q Consensus 494 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~v~v~~ 529 (1075)
.|.|..+..+|+|.|+|.|.|..|...+. +.|.|..
T Consensus 164 ~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~ 200 (212)
T 2yd1_A 164 FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKV 200 (212)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEe
Confidence 68999999999999999999999998775 7888874
No 113
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.89 E-value=3.8e-23 Score=215.91 Aligned_cols=186 Identities=19% Similarity=0.361 Sum_probs=146.8
Q ss_pred CCCeEEecc----ceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEE
Q psy16863 747 KAPKFIEGL----KSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKC 822 (1075)
Q Consensus 747 ~~p~~~~~~----~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 822 (1075)
.+|.|...+ ....+.+|+++.|.|.+.|.|.+.++|+|+|..+....++.......+...|.|.+++.+|+|.|+|
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 93 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC 93 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEE
Confidence 477776665 6778999999999999999999999999999999766544221122233479999999999999999
Q ss_pred EEEeCCceEEEEEEEEEEecCCCCCCeeeee--cceeecCCCeEEEEEEEEccCCCeeEEEE----CCEEcCCCC-----
Q psy16863 823 IATNDFGQSITSCFLKLNVPKHYKKPKFLEE--LKAVLSEGGAVNLECKVIGVPQPTLKWFK----DGRELKAGD----- 891 (1075)
Q Consensus 823 ~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~--~~~~~~~g~~~~L~C~v~g~p~p~v~W~k----~g~~l~~~~----- 891 (1075)
.|.|..|....++.|.|..++.. +|.+... ....+.+|+.++|.|.+.|.|.|.++|+| +|..+..+.
T Consensus 94 ~~~n~~~~~~~~~~l~V~~~~~~-~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~ 172 (231)
T 3ojm_B 94 VVENEYGSINHTYHLDVVERSRH-RPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLK 172 (231)
T ss_dssp EEEETTEEEEEEEEEEEECCCCC-CCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEE
T ss_pred EEecccCcccccEEEEEEcCCCC-CCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEe
Confidence 99999999988899998875533 2333221 22346789999999999999999999999 887775432
Q ss_pred -----------eeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEecCChh
Q psy16863 892 -----------IHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFEDKSQ 933 (1075)
Q Consensus 892 -----------~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~ 933 (1075)
...|.+......|+|.|+|.|.|..|..+.++.|.|..++..
T Consensus 173 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 225 (231)
T 3ojm_B 173 VLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQA 225 (231)
T ss_dssp EEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC--
T ss_pred EecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCC
Confidence 124667777788999999999999999999999999876544
No 114
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.89 E-value=1.5e-22 Score=203.97 Aligned_cols=175 Identities=23% Similarity=0.440 Sum_probs=134.5
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeec--CCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVE--SDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~--~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
+|.|...+.+..+.+|+++.|.|.+.+.|.+.+.|+|++..+.. ..++.+. ..+ .|.|.+++.+|+|.|+|.|.
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~--~L~i~~~~~~d~G~Y~C~~~ 77 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAML--ANN--NLQILNINKSDEGIYRCEGR 77 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEEC--TTS--CEEETTCCGGGCEEEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEe--cCC--CEEEeeCCHhHCcEEEEEEE
Confidence 67888888889999999999999999999999999999988864 3444432 222 69999999999999999999
Q ss_pred eCCceEE--EEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCee-------EEE
Q psy16863 826 NDFGQSI--TSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDIH-------KII 896 (1075)
Q Consensus 826 N~~G~~~--~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~~-------~i~ 896 (1075)
|..+... ....+.|..++.+..+.. .....+.+|+.++|.|.+.|.|.|.|+|+|||..+..+.++ .|.
T Consensus 78 ~~~~~~~~~~~~~l~v~~~p~~~~~~~--~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~ 155 (189)
T 2v5t_A 78 VEARGEIDFRDIIVIVNVPPAISMPQK--SFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELT 155 (189)
T ss_dssp ETTTTEEEEEEEEEEEEEEEEEECSCC--EEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEE
T ss_pred EcCCCceEEEEEEEEecCCCCcccccc--cccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEE
Confidence 9986544 345566665543222111 11223678999999999999999999999999999865433 456
Q ss_pred ECCCCceeeEEEEEEEEeCCeeEEEEEEEEEe
Q psy16863 897 SGEDGTCCLGIYTCEAHNCMGTTSSSAALLGF 928 (1075)
Q Consensus 897 ~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 928 (1075)
+......|+|.|+|.|.|..|..++++.|.|+
T Consensus 156 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 156 VRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 66777789999999999999999999998875
No 115
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.89 E-value=1.1e-22 Score=205.58 Aligned_cols=176 Identities=24% Similarity=0.351 Sum_probs=142.1
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeec-CCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVE-SDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
.+|.|...+....+.+|+++.|.|.+.|.|.+.++|+|+|..+.. ..++.+...+ ..|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 6 KAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENG---QLLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp EEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGG---TEEEESSCCGGGCEEEEEEEE
T ss_pred CCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCc---cEEEEcCCCcccCeEEEEEEE
Confidence 578888888888999999999999999999999999999999875 4555554222 279999999999999999999
Q ss_pred eCCce-EEEEEEEEEEecCCCCCCeeeeec-ceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCee------EEEE
Q psy16863 826 NDFGQ-SITSCFLKLNVPKHYKKPKFLEEL-KAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDIH------KIIS 897 (1075)
Q Consensus 826 N~~G~-~~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~~------~i~~ 897 (1075)
|..|. ......|.|..++. +.... ...+.+|+.++|.|.+.|.|.|.|+|+|+|..+..+.++ .|.+
T Consensus 83 ~~~~~~~~~~~~l~v~~~p~-----~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i 157 (192)
T 2iep_A 83 NGVGGAVESCGALQVKMKPK-----ITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRI 157 (192)
T ss_dssp CSSSCCEEEEEEEEEEEEEE-----EEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEE
T ss_pred cCCCceeEeEEEEEEEeCCc-----cccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEE
Confidence 99988 45567888876543 33222 234678999999999999999999999999999766543 3566
Q ss_pred CCCCceeeEEEEEEEEeCCeeEEE-EEEEEEecC
Q psy16863 898 GEDGTCCLGIYTCEAHNCMGTTSS-SAALLGFED 930 (1075)
Q Consensus 898 ~~~~~~d~G~Y~C~a~N~~G~~~~-~~~l~v~~~ 930 (1075)
......|+|.|+|.|.|..|...+ .+.|.|..+
T Consensus 158 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~p 191 (192)
T 2iep_A 158 HNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVF 191 (192)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred ecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeC
Confidence 677778999999999999999854 577776544
No 116
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.89 E-value=3.6e-22 Score=199.67 Aligned_cols=173 Identities=21% Similarity=0.360 Sum_probs=136.3
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeC-cEEEEEEccccCCCCeEEEEEEEe
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETL-GVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
+|.|...+.+..+.+|+++.|.|.+.+.|.+.++|+|+|..+....+..+..... ....|.|.+++.+|+|.|+|.|.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 4677777888899999999999999999999999999999998776665544322 146899999999999999999999
Q ss_pred CCceEE-EEEEEEEEecCCCCCCeeeeecc-eeecCCCeEEEEEEEEccCCC-eeEEEECCEEcCCC--CeeEEEECCCC
Q psy16863 827 DFGQSI-TSCFLKLNVPKHYKKPKFLEELK-AVLSEGGAVNLECKVIGVPQP-TLKWFKDGRELKAG--DIHKIISGEDG 901 (1075)
Q Consensus 827 ~~G~~~-~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~p~p-~v~W~k~g~~l~~~--~~~~i~~~~~~ 901 (1075)
..|... ..+.|.|..+ |.+...+. ..+.+|+.+.|.|.+.|.|.| .|+|+|+|..+... ....|.+...
T Consensus 82 ~~~~~~~~~~~l~V~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~L~i~~~- 155 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGV-----PFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGV- 155 (182)
T ss_dssp CTTCEECCCEEEEEECS-----CEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEESSEEEEECCC-
T ss_pred CCCcEEEEEEEEEEecC-----CeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCCCceEEEEecc-
Confidence 987643 4778888765 34443333 347799999999999999999 99999999999754 3456666555
Q ss_pred ceeeEEEEEEEEeCCeeEEE-EEEEEE
Q psy16863 902 TCCLGIYTCEAHNCMGTTSS-SAALLG 927 (1075)
Q Consensus 902 ~~d~G~Y~C~a~N~~G~~~~-~~~l~v 927 (1075)
.|+|.|+|.|.|..|...+ ++.|.|
T Consensus 156 -~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 156 -TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp -SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred -ccCeEEEEEEECCCCCcccceEEEEe
Confidence 4799999999999999864 666665
No 117
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.89 E-value=5.8e-22 Score=199.96 Aligned_cols=175 Identities=18% Similarity=0.260 Sum_probs=139.1
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCC-CCeEEEEE-CCEEee-cCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEE
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISP-EPKVSWFR-DDQQVV-ESDNVKILKETLGVCHLKIHALEVADQAEWKCIA 824 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p-~p~v~W~k-~g~~i~-~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A 824 (1075)
|+.|...+.+..+.+|+++.|.|.+.+.| .+.++|+| +|..+. ...++.+.....+...|.|.+++.+|+|.|+|.|
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 56677777888899999999999999987 88999999 898887 5567777665567789999999999999999999
Q ss_pred EeCCc-eEEEEEEEEEEecCCCCCCeeeeecc-eeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCC--------eeE
Q psy16863 825 TNDFG-QSITSCFLKLNVPKHYKKPKFLEELK-AVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGD--------IHK 894 (1075)
Q Consensus 825 ~N~~G-~~~~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~--------~~~ 894 (1075)
.|..| .....+.|.|..+ |.+...+. ..+.+|+.++|.|.+.|.|.|.|+|+|+|..+.... ...
T Consensus 82 ~~~~~~~~~~~~~l~v~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 156 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQK-----LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY 156 (191)
T ss_dssp EETTTEEEEEEEEEEEECC-----SEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSC
T ss_pred EcCCCcceEEEEEEEeecC-----ceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCe
Confidence 99984 5555666666643 44433332 347799999999999999999999999999985321 114
Q ss_pred EEECCCCceeeEEEEEEEEeCCeeEEEEEEEEE
Q psy16863 895 IISGEDGTCCLGIYTCEAHNCMGTTSSSAALLG 927 (1075)
Q Consensus 895 i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 927 (1075)
|.+......|+|.|+|.|.|.+|.......+.+
T Consensus 157 L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 157 LQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp EEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred EEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 666777788999999999999976665555544
No 118
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.89 E-value=9.5e-22 Score=198.09 Aligned_cols=169 Identities=16% Similarity=0.255 Sum_probs=136.7
Q ss_pred CCCeEEeccceeeeec-CCeEEEEEEEecCCC--CeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEE
Q psy16863 747 KAPKFIEGLKSCQATV-NEEFKFTVQVSISPE--PKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCI 823 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~-g~~~~l~C~v~g~p~--p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 823 (1075)
.||.+.... ...+.. |+++.|.|.+.+.|. +.++|+|+|.++..+.... ....|.|.+++.+|+|.|+|.
T Consensus 2 ~~P~i~~~~-~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~------~~~~L~i~~~~~~d~G~Y~C~ 74 (190)
T 2wv3_A 2 NEPRIVTSE-EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA------SNMEYRINKPRAEDSGEYHCV 74 (190)
T ss_dssp -CCEEEECC-CEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC------SEEEEEESSCCGGGCEEEEEE
T ss_pred CCCcccccc-eEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe------ccEEEEEecCCcccCEEEEEE
Confidence 477777643 445556 999999999999887 8999999999997665332 346899999999999999999
Q ss_pred EEeCCceEEEEEEEEEEecCCCCCCeeeeecc-eeecCCCeEEEEEEEEccCCCeeEEEE--CCEEcC---CCCe-----
Q psy16863 824 ATNDFGQSITSCFLKLNVPKHYKKPKFLEELK-AVLSEGGAVNLECKVIGVPQPTLKWFK--DGRELK---AGDI----- 892 (1075)
Q Consensus 824 A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~p~p~v~W~k--~g~~l~---~~~~----- 892 (1075)
|.|. |....++.|.|..+| .+..... ..+.+|+.+.|.|.+.|.|.|.|+|+| +|..+. .+.+
T Consensus 75 ~~n~-~~~~~~~~l~V~~~p-----~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~ 148 (190)
T 2wv3_A 75 YHFV-SAPKANATIEVKAAP-----DITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIIN 148 (190)
T ss_dssp EEET-TEEEEEEEEEEECCC-----EEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEE
T ss_pred EEeC-CcccccEEEEEecCC-----cccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEec
Confidence 9999 988889999998754 4443333 247799999999999999999999999 888774 2222
Q ss_pred ----eEEEECCCC-ceeeEEEEEEEEeCCeeEEEEEEEEEe
Q psy16863 893 ----HKIISGEDG-TCCLGIYTCEAHNCMGTTSSSAALLGF 928 (1075)
Q Consensus 893 ----~~i~~~~~~-~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 928 (1075)
..|.+.... ..|+|.|+|.|.|.+|..++++.|.|.
T Consensus 149 ~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 149 KENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp CSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 256677777 689999999999999999999888774
No 119
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.89 E-value=1.1e-22 Score=213.80 Aligned_cols=186 Identities=18% Similarity=0.332 Sum_probs=142.9
Q ss_pred CCCeEEecc----ceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEE
Q psy16863 747 KAPKFIEGL----KSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKC 822 (1075)
Q Consensus 747 ~~p~~~~~~----~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 822 (1075)
.+|.|+.+. ....+.+|+++.|.|.+.|.|.+.++|+|+|..+....++.......+...|.|.+++.+|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 477777653 3578999999999999999999999999999999765443211112233479999999999999999
Q ss_pred EEEeCCceEEEEEEEEEEecCCCCCCeeeee-c-ceeecCCCeEEEEEEEEccCCCeeEEEE----CCEEcCCCC-----
Q psy16863 823 IATNDFGQSITSCFLKLNVPKHYKKPKFLEE-L-KAVLSEGGAVNLECKVIGVPQPTLKWFK----DGRELKAGD----- 891 (1075)
Q Consensus 823 ~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~-~-~~~~~~g~~~~L~C~v~g~p~p~v~W~k----~g~~l~~~~----- 891 (1075)
.|.|..|....+..|.|...+.. .|.+... . ...+.+|+.++|.|.+.|.|.|.|+|+| ||..+..+.
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~-~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~ 168 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSPH-RPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVT 168 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCCC-CCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEE
T ss_pred EEeecCCceEEEEEEEEeccCCC-CceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeee
Confidence 99999999988888888764432 2333221 2 2346789999999999999999999999 888876543
Q ss_pred ------------eeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEecCChh
Q psy16863 892 ------------IHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFEDKSQ 933 (1075)
Q Consensus 892 ------------~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~ 933 (1075)
...|.+......|+|.|+|.|.|..|..+.++.|.|..++..
T Consensus 169 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~ 222 (241)
T 3grw_A 169 VLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAA 222 (241)
T ss_dssp EEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC------
T ss_pred eeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCC
Confidence 234677777888999999999999999999999999776543
No 120
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.89 E-value=1.6e-21 Score=200.28 Aligned_cols=181 Identities=24% Similarity=0.432 Sum_probs=147.5
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEE-EcCCEEEEEEccc-CCCCceeEEEEEE
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQ-HDGNFYFIDLSSV-SLFDSGRWTCLAE 425 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~-~~g~~~~L~I~~v-~~~d~G~Y~C~a~ 425 (1075)
.+|.|...+.+..+.+|+++.|.|.+.|.|.+.|.|+|+|..+..+...... .++....|.|.++ +.+|+|.|+|.|.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~ 84 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVAS 84 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEE
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEE
Confidence 4788888888999999999999999999999999999999999766543333 3446678999999 5999999999999
Q ss_pred eCCCceeeEEEEEeecCCCC--CCCeeeeecce-EEecCCeEEEEEEEECCCCCeEEEEeCCEeccCC------------
Q psy16863 426 NAVGRSHCSCELSVLVPKAY--KAPFFTKELEA-ILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAG------------ 490 (1075)
Q Consensus 426 n~~g~~~~s~~l~V~~~~~~--~~p~~~~~~~~-~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~------------ 490 (1075)
|..|....++.|.|...+.. ..|.+...+.. .+.+|+.+.|.|.+.|.|.+.+.|+|+|..+...
T Consensus 85 n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~ 164 (212)
T 2yd6_A 85 NNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSE 164 (212)
T ss_dssp ETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEET
T ss_pred cCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecC
Confidence 99999888888888765432 22455544433 4788999999999999999999999999998653
Q ss_pred CEEEEEeCCCCCCCcEEEEEEEEecceeeEEE-EEEEEe
Q psy16863 491 DIFALTANPKDPSSLGTYTCEAVNCMGAAFST-SRVIAR 528 (1075)
Q Consensus 491 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~v~v~ 528 (1075)
....|.|..+..+|+|.|+|.|.|..|...++ +.+.|.
T Consensus 165 ~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~ 203 (212)
T 2yd6_A 165 SIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVR 203 (212)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEE
Confidence 23678999999999999999999999987654 555554
No 121
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.89 E-value=3.5e-22 Score=206.11 Aligned_cols=177 Identities=18% Similarity=0.237 Sum_probs=142.2
Q ss_pred hccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEE
Q psy16863 742 LLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWK 821 (1075)
Q Consensus 742 ~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 821 (1075)
+......+.|...+.+..+.+|+++.|.|.+.+.|.+.++|+|+|..+..+. ...|.|.+++.+|+|.|+
T Consensus 12 ~~~~~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~ 81 (218)
T 3k0w_A 12 SGLVPRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN----------TSELIFNAVHVKDAGFYV 81 (218)
T ss_dssp -------CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC----------SSEEEETTCCGGGCEEEE
T ss_pred CCccCCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC----------CCEEEEccCChhhCeEeE
Confidence 3344578899999999999999999999999999999999999999886543 237999999999999999
Q ss_pred EEEEeCCceE-EEEEEEEEEecCCC----------CCCeeeeecc-eeecCCCeEEEEEEEEccCCCeeEEEECCEEcCC
Q psy16863 822 CIATNDFGQS-ITSCFLKLNVPKHY----------KKPKFLEELK-AVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKA 889 (1075)
Q Consensus 822 C~A~N~~G~~-~~s~~l~V~~~~~~----------~~p~~~~~~~-~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~ 889 (1075)
|.|.|..|.. ...+.|.|..++.. .+|.+...+. ..+.+|+.++|.|.+.|.|.|.|+|+|||..+..
T Consensus 82 C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~ 161 (218)
T 3k0w_A 82 CRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTH 161 (218)
T ss_dssp EEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTT
T ss_pred EEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCC
Confidence 9999998865 34577888765311 2245544443 3477999999999999999999999999999998
Q ss_pred CCeeEEEECCCCceeeEEEEEEEEeCCeeEE-EEEEEEEe
Q psy16863 890 GDIHKIISGEDGTCCLGIYTCEAHNCMGTTS-SSAALLGF 928 (1075)
Q Consensus 890 ~~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~-~~~~l~v~ 928 (1075)
+....|.+......|+|.|+|.|.|..|... ..+.|.|.
T Consensus 162 ~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 162 ETKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp CCSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEC
T ss_pred CCCCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEe
Confidence 8888898999999999999999999999844 45555554
No 122
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.89 E-value=3.8e-21 Score=193.69 Aligned_cols=171 Identities=22% Similarity=0.375 Sum_probs=142.2
Q ss_pred CCceeeccceeeec-CCeEEEEEEEecCCC--CeEEEEECCEEcCCCCe------EEEe--ecCCCceEEEEEEecCceE
Q psy16863 651 KPRFVESLKAVMTD-DGLVSFECKVVGFPT--PTLQWFKDNEELKPGDV------YQLT--GTSSLGSYCCVAKNVMGKA 719 (1075)
Q Consensus 651 ~p~~~~~~~~~~~~-g~~~~l~C~v~g~p~--p~v~W~k~g~~l~~~~~------~~~~--~~~d~G~Y~C~a~N~~g~~ 719 (1075)
+|.+.......+.+ |+.+.|.|.+.+.|. +.++|+|+|..+..+.. +.+. ..+|+|.|+|.|.|. |..
T Consensus 3 ~P~i~~~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~ 81 (190)
T 2wv3_A 3 EPRIVTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFV-SAP 81 (190)
T ss_dssp CCEEEECCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEET-TEE
T ss_pred CCcccccceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeC-Ccc
Confidence 45555555555556 889999999998887 78999999999876543 3343 347999999999999 888
Q ss_pred EEEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEE--CCEEee---cCCc
Q psy16863 720 ESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFR--DDQQVV---ESDN 794 (1075)
Q Consensus 720 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k--~g~~i~---~~~~ 794 (1075)
..++.|.|. .+|.+...+....+..|+.+.|.|.+.|.|.|.++|+| +|.++. .+.+
T Consensus 82 ~~~~~l~V~------------------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~ 143 (190)
T 2wv3_A 82 KANATIEVK------------------AAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGR 143 (190)
T ss_dssp EEEEEEEEE------------------CCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSC
T ss_pred cccEEEEEe------------------cCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCe
Confidence 888999987 47888887888889999999999999999999999999 888875 4566
Q ss_pred EEEEEeeCcEEEEEEcccc-CCCCeEEEEEEEeCCceEEEEEEEEEEe
Q psy16863 795 VKILKETLGVCHLKIHALE-VADQAEWKCIATNDFGQSITSCFLKLNV 841 (1075)
Q Consensus 795 ~~~~~~~~~~~~L~I~~~~-~~D~G~Y~C~A~N~~G~~~~s~~l~V~~ 841 (1075)
+.+... .+...|.|.+++ .+|+|.|+|.|.|..|....++.|.|.+
T Consensus 144 ~~~~~~-~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~V 190 (190)
T 2wv3_A 144 FFIINK-ENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVRV 190 (190)
T ss_dssp EEEEEC-SSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEEecC-CCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEEC
Confidence 666543 345689999999 7999999999999999999998888863
No 123
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.88 E-value=3.8e-22 Score=205.18 Aligned_cols=168 Identities=21% Similarity=0.265 Sum_probs=135.5
Q ss_pred cCCeEEEEEEEecC-CCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEE
Q psy16863 762 VNEEFKFTVQVSIS-PEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLN 840 (1075)
Q Consensus 762 ~g~~~~l~C~v~g~-p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~ 840 (1075)
.++.+.|.|.+.+. |.+.++|+|+|.++..+.++.+...+ +...|.|.+++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTG-EQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEET-TEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred cCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeC-CEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 67889999999985 58899999999999988888876543 56789999999999999999999999988777666554
Q ss_pred ec---------------CCCCCCeeeeec-c-eeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCe----------e
Q psy16863 841 VP---------------KHYKKPKFLEEL-K-AVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDI----------H 893 (1075)
Q Consensus 841 ~~---------------~~~~~p~~~~~~-~-~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~----------~ 893 (1075)
.. .....|.+.... . ..+.+|+.++|.|.+.|.|.|.|+|+|||.++..+.+ .
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 174 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTA 174 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEE
T ss_pred eccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEE
Confidence 20 001123333322 2 2477999999999999999999999999999986543 3
Q ss_pred EEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEecC
Q psy16863 894 KIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFED 930 (1075)
Q Consensus 894 ~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~ 930 (1075)
.|.+......|+|.|+|.|.|.+|..+.++.|.|+.|
T Consensus 175 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 175 YFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 5666677788999999999999999999999988754
No 124
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.88 E-value=3.2e-21 Score=195.16 Aligned_cols=172 Identities=19% Similarity=0.358 Sum_probs=142.2
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEe-cCCCcEEEEEECCEecCCCC--cEEEEEcCC-------EEEEEEcccCCCCce
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIR-SPTEIKIHWYRNDRKLEENK--IYRTQHDGN-------FYFIDLSSVSLFDSG 418 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~-g~p~~~v~W~k~g~~l~~~~--~~~~~~~g~-------~~~L~I~~v~~~d~G 418 (1075)
+|.|+..+.+..+.+|+++.|.|.+. |.|.+.|.|+|+|..+.... ++.+..... ...|.|.+++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 78899999999999999999999998 89999999999999998763 444443332 468999999999999
Q ss_pred eEEEEEEeCCCceee-EEEEEeecCCCCCCCeeeeecc-eEEecCCeEEEEEEEECCCCC-eEEEEeCCEeccCC----C
Q psy16863 419 RWTCLAENAVGRSHC-SCELSVLVPKAYKAPFFTKELE-AILTEQGTVSLECKVMGIPTP-QLIWYKDNKKIKAG----D 491 (1075)
Q Consensus 419 ~Y~C~a~n~~g~~~~-s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~v~l~C~~~g~p~~-~v~W~~~g~~l~~~----~ 491 (1075)
.|+|.|.|..|.... .+.|.|..+| .+...+. ..+.+|+.+.|.|.+.|.|.| .|.|+|++..+... .
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~p-----~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~ 156 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGLP-----YFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGP 156 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCSC-----EEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTSSC
T ss_pred EEEEEEEeCCCceecccEEEEEecCC-----eEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCcCC
Confidence 999999998776543 3777776654 4443333 347889999999999999999 99999999998764 4
Q ss_pred EEEEEeCCCCCCCcEEEEEEEEecceeeE-EEEEEEE
Q psy16863 492 IFALTANPKDPSSLGTYTCEAVNCMGAAF-STSRVIA 527 (1075)
Q Consensus 492 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~v~v 527 (1075)
...|.|..+. |+|.|+|.|.|..|... ..+.|.|
T Consensus 157 ~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 157 QRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp CEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 5688888876 78999999999999886 6777777
No 125
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.88 E-value=3e-21 Score=194.28 Aligned_cols=170 Identities=20% Similarity=0.359 Sum_probs=134.4
Q ss_pred EEeccceeeeecCCeEEEEEEEecCCCCeEEEEE-CCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCc
Q psy16863 751 FIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFR-DDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFG 829 (1075)
Q Consensus 751 ~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k-~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G 829 (1075)
|...+.+..+.+|+++.|.|.+.|.|. .++|+| +|..+....++.+... .+...|.|.+++.+|+|.|+|.|.|..|
T Consensus 5 ~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 82 (189)
T 2v44_A 5 VTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKE-GVRSRLTIYNANIEDAGIYRCQATDAKG 82 (189)
T ss_dssp EEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred EEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECC-CCeEEEEEccCCcccCeEEEEEEEeCCC
Confidence 455567778999999999999999887 999999 8888888888877654 3567999999999999999999999999
Q ss_pred eE-EEEEEEEEEecCCCCCCeeeeecc-eeecCCCeEEEEEEEEccCCCeeEEEECCEEcCC--CCe------eEEEECC
Q psy16863 830 QS-ITSCFLKLNVPKHYKKPKFLEELK-AVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKA--GDI------HKIISGE 899 (1075)
Q Consensus 830 ~~-~~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~--~~~------~~i~~~~ 899 (1075)
.. ...+.|.|..++ .+...+. ..+.+|+.++|.|.+.|.|.|.++|+|+|.++.. +.+ ..|.+..
T Consensus 83 ~~~~~~~~l~v~~~p-----~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~ 157 (189)
T 2v44_A 83 QTQEATVVLEIYQKL-----TFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILN 157 (189)
T ss_dssp CEEEEEEEEEEECCC-----EEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETT
T ss_pred CcEEEEEEEEEecCC-----ceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEE
Confidence 76 556777777543 3322222 2467999999999999999999999999998752 222 2466677
Q ss_pred CCceeeEEEEEEEEeCCeeEEEEEEEEE
Q psy16863 900 DGTCCLGIYTCEAHNCMGTTSSSAALLG 927 (1075)
Q Consensus 900 ~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 927 (1075)
....|+|.|+|.|.|..|.......+.+
T Consensus 158 v~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 158 INKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred cCcccCeEEEEEEEccccCceeeeeEEE
Confidence 7788999999999999987766555554
No 126
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.88 E-value=3.3e-22 Score=206.45 Aligned_cols=181 Identities=27% Similarity=0.440 Sum_probs=139.6
Q ss_pred CCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCC--cEEEEEeeCc-EEEEEEccccCCCCeEEEE
Q psy16863 746 NKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESD--NVKILKETLG-VCHLKIHALEVADQAEWKC 822 (1075)
Q Consensus 746 ~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~--~~~~~~~~~~-~~~L~I~~~~~~D~G~Y~C 822 (1075)
..+|.|...+.+..+.+|+++.|.|.+.|.|.+.|+|+|+|..+.... ...+...... ...|.|.+++.+|+|.|+|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 379999999999999999999999999999999999999999987642 2222222211 2234789999999999999
Q ss_pred EEEeCCceEEE-EEEEEEEecCCCCCCeeeeec-ceeecCCCeEEEEEEE-EccCCCeeEEEECCEEcCCC--------C
Q psy16863 823 IATNDFGQSIT-SCFLKLNVPKHYKKPKFLEEL-KAVLSEGGAVNLECKV-IGVPQPTLKWFKDGRELKAG--------D 891 (1075)
Q Consensus 823 ~A~N~~G~~~~-s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~~~L~C~v-~g~p~p~v~W~k~g~~l~~~--------~ 891 (1075)
.|.|..|.... ++.|.|...+ |.+...+ ...+.+|+.++|.|.+ .|.|.|.|+|+|+|.++... .
T Consensus 87 ~~~n~~g~~~~~~~~l~v~~~~----~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~ 162 (217)
T 2vr9_A 87 VAKNRVGQAVSRHASLQIAVLR----DDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASS 162 (217)
T ss_dssp EEEETTEEEECCCEEEEECEEC----CSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCC
T ss_pred EEecCCCccccccceEEEEEeC----CCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCC
Confidence 99999997643 5666666522 1222222 2347789999999999 89999999999999998732 2
Q ss_pred e------eEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEecC
Q psy16863 892 I------HKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFED 930 (1075)
Q Consensus 892 ~------~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~ 930 (1075)
+ ..|.+......|+|.|+|.|.|.+|...++..++++..
T Consensus 163 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~~ 207 (217)
T 2vr9_A 163 RVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQV 207 (217)
T ss_dssp SEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred cEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEEe
Confidence 2 24666777778999999999999999998888777643
No 127
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.87 E-value=1.6e-21 Score=196.83 Aligned_cols=172 Identities=15% Similarity=0.091 Sum_probs=133.4
Q ss_pred cceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCcc-------------c----cCCCeEEEeeCCeEEEEEc
Q psy16863 251 DIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHP-------------I----FGNRFRAINRDGRTELNIR 313 (1075)
Q Consensus 251 ~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~-------------~----~~~~~~~~~~~~~~~L~I~ 313 (1075)
++++..|+.++|.|.+... .+++.+.+.|++++... . ...++.+....+...|.|.
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v-------~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 74 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRV-------SLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVT 74 (203)
T ss_dssp CCEEETTCCEEEEEECSST-------TCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEES
T ss_pred CeEEEcCCCEEEEeeeecc-------CCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEc
Confidence 4578899999999965321 12334455555543211 0 1334566677788899999
Q ss_pred ccCCCCCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecC--
Q psy16863 314 RVRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLE-- 391 (1075)
Q Consensus 314 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~-- 391 (1075)
+++.+|+|.|+|.|.|..|..+..+.|.|.. ||.+...+....+.+|++++|.|.+.|.|.|.|+|+|++..+.
T Consensus 75 ~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~----p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~ 150 (203)
T 4fa8_A 75 AANISHDGNYLCRMKLGETEVTKQEHLSVVK----PLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAP 150 (203)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEE----EEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC-------
T ss_pred cCCHHHCeEEEEEEEcCCCcEEEEEEEEecC----CceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCc
Confidence 9999999999999999999999999999984 7778777888899999999999999999999999998775542
Q ss_pred --CCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceee
Q psy16863 392 --ENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHC 433 (1075)
Q Consensus 392 --~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~ 433 (1075)
.+.++.+..+|....|.|.++..+|+|.|+|.|+|..|..+.
T Consensus 151 ~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 151 TAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp -----CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred ccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 345667777888888899999999999999999999998764
No 128
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.87 E-value=7.5e-21 Score=195.43 Aligned_cols=189 Identities=14% Similarity=0.256 Sum_probs=154.0
Q ss_pred eeeccceeEEEEEecCCCceEEEEecC-CCeeeEEecCCCccccCCCeEEEeeCCeEEEEEcccCCCCCEEEEEEEEeCC
Q psy16863 253 AVKVGTRARLLVEIRSPTEIKCQFDLN-NTIPFSFRAQGDHPIFGNRFRAINRDGRTELNIRRVRRDDGGRYSVTASNES 331 (1075)
Q Consensus 253 ~v~~g~~~~l~c~~~~~~~~~c~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~ 331 (1075)
.+..|++++|.|... ...+.|.+.+. +.+.+.|++++..+....++++...++...|.|.+++.+|+|.|+|.|.|..
T Consensus 4 ~~~~g~~v~l~c~~~-~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~ 82 (212)
T 2r15_A 4 IALSATDLKIQSTAE-GIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGK 82 (212)
T ss_dssp --CCBCCCEEEECSS-EEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSS
T ss_pred cceecCcEEEEEcCc-eEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCC
Confidence 456788888888543 34678888875 4778889888766666788888888888899999999999999999999998
Q ss_pred eeEEEEEEEEEec-----------------CCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCC
Q psy16863 332 GYSTAKFELSVES-----------------QVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENK 394 (1075)
Q Consensus 332 g~~~~~~~l~V~~-----------------~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~ 394 (1075)
|.....+.|.|.. ....|+.+...+....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+..+.
T Consensus 83 ~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~ 162 (212)
T 2r15_A 83 TGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTD 162 (212)
T ss_dssp CEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCS
T ss_pred cceEEEEEEEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCC
Confidence 8877777766541 01123333344556789999999999999999999999999999999888
Q ss_pred cEEEEEc-CCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecC
Q psy16863 395 IYRTQHD-GNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVP 442 (1075)
Q Consensus 395 ~~~~~~~-g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~ 442 (1075)
++.+... +....|.|.++..+|+|.|+|.|.|..|....++.|.|.+|
T Consensus 163 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 163 HCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp SEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 8877765 77788999999999999999999999999988888888765
No 129
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.87 E-value=7.5e-21 Score=190.01 Aligned_cols=172 Identities=23% Similarity=0.356 Sum_probs=138.4
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCC--EEEEEEcccCCCCceeEEEEEEe
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGN--FYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~--~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
+|.|...+.+..+.+|+++.|.|.+.+.|.+.+.|+|+|..+....+..+..++. ...|.|.+++.+|+|.|+|.+.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 4667777788899999999999999998999999999999998877666655543 35799999999999999999999
Q ss_pred CCCc-eeeEEEEEeecCCCCCCCeeeeecc-eEEecCCeEEEEEEEECCCCC-eEEEEeCCEeccCC--CEEEEEeCCCC
Q psy16863 427 AVGR-SHCSCELSVLVPKAYKAPFFTKELE-AILTEQGTVSLECKVMGIPTP-QLIWYKDNKKIKAG--DIFALTANPKD 501 (1075)
Q Consensus 427 ~~g~-~~~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~v~l~C~~~g~p~~-~v~W~~~g~~l~~~--~~~~l~i~~~~ 501 (1075)
..|. ....+.|.|..+| .+...+. ..+.+|+.+.|.|.+.|.|.| .+.|++++..+... ....|.|..+
T Consensus 82 ~~~~~~~~~~~l~V~~~p-----~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~L~i~~~- 155 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGVP-----FFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGV- 155 (182)
T ss_dssp CTTCEECCCEEEEEECSC-----EEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEESSEEEEECCC-
T ss_pred CCCcEEEEEEEEEEecCC-----eEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCCCceEEEEecc-
Confidence 8775 3457788887654 4443333 347899999999999999999 99999999998665 4568888877
Q ss_pred CCCcEEEEEEEEecceeeEE-EEEEEE
Q psy16863 502 PSSLGTYTCEAVNCMGAAFS-TSRVIA 527 (1075)
Q Consensus 502 ~~d~G~Y~C~a~n~~g~~~~-~~~v~v 527 (1075)
+|+|.|+|.|.|..|...+ ++.|.|
T Consensus 156 -~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 156 -TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp -SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred -ccCeEEEEEEECCCCCcccceEEEEe
Confidence 5899999999999998854 666665
No 130
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.87 E-value=9.3e-21 Score=191.25 Aligned_cols=172 Identities=23% Similarity=0.383 Sum_probs=142.7
Q ss_pred CCeeeeec--CceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 349 APAFIRRL--HDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 349 ~p~~~~~~--~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
||.|.... .+..+.+|+++.|.|.+.+.|.+.+.|+|+|..+....++.+..++. .|.|.+++.+|+|.|+|.+.|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~~ 79 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATN 79 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTT--EEEECSCCGGGCEEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCee--EEEEecCChhcCcEEEEEEEc
Confidence 56665443 35788999999999999999999999999999998887776654443 589999999999999999999
Q ss_pred CCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeC--CEeccCC--------------
Q psy16863 427 AVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKD--NKKIKAG-------------- 490 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~--g~~l~~~-------------- 490 (1075)
..|.......|.|..+| .+.......+.+|+.+.|.|.+.|.|.+.+.|+++ +..+..+
T Consensus 80 ~~~~~~~~~~l~V~~~p-----~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (192)
T 2va4_A 80 KAGEDEKQAFLQVFVQP-----HIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQH 154 (192)
T ss_dssp TTEEEEEEEEEEEEEEE-----EEEEECCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEET
T ss_pred cccccceEEEEEEEccC-----cccccCcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeecc
Confidence 99988888888887654 34334444577899999999999999999999998 6665432
Q ss_pred CEEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEE
Q psy16863 491 DIFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIA 527 (1075)
Q Consensus 491 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v 527 (1075)
....|.|..+..+|+|.|+|.|.|..|....++.|.|
T Consensus 155 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 155 GSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp TEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 1357899999999999999999999999888888776
No 131
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.87 E-value=2.3e-22 Score=206.78 Aligned_cols=183 Identities=21% Similarity=0.411 Sum_probs=138.3
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCc----EEEEEeeCcE--EEEEEccccCCCCeEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDN----VKILKETLGV--CHLKIHALEVADQAEW 820 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~----~~~~~~~~~~--~~L~I~~~~~~D~G~Y 820 (1075)
.||.|...+.+..+.+|+++.|.|.+.|.|.+.++|+|+|..+..... .......... ..|.|.+++.+|+|.|
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 87 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEE
Confidence 588999989999999999999999999999999999999998864431 1222122221 1355677899999999
Q ss_pred EEEEEeCCceEE-EEEEEEEEecCCCCCCeeeeec-ceeecCCCeEEEEEEE-EccCCCeeEEEECCEEcCCCCe-----
Q psy16863 821 KCIATNDFGQSI-TSCFLKLNVPKHYKKPKFLEEL-KAVLSEGGAVNLECKV-IGVPQPTLKWFKDGRELKAGDI----- 892 (1075)
Q Consensus 821 ~C~A~N~~G~~~-~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~~~L~C~v-~g~p~p~v~W~k~g~~l~~~~~----- 892 (1075)
+|.|.|..|... .++.|.|..++. .+...+ ...+.+|+.++|.|.+ .|.|.|.|+|+|||..+..+..
T Consensus 88 ~C~~~n~~g~~~~~~~~l~V~~~~~----~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~ 163 (212)
T 2v9r_A 88 VCVARNYLGEAVSHDASLEVAILRD----DFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIR 163 (212)
T ss_dssp EEEEEETTEEEECCCEEEEECEECS----SCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEE
T ss_pred EEEEECCCCceeecceEEEEEeccc----cceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEcc
Confidence 999999998763 367777765432 122122 2347789999999999 8999999999999999976432
Q ss_pred -eEEEECCCCceeeEEEEEEEEeCCeeEEEE-EEEEEecCChh
Q psy16863 893 -HKIISGEDGTCCLGIYTCEAHNCMGTTSSS-AALLGFEDKSQ 933 (1075)
Q Consensus 893 -~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~-~~l~v~~~~~~ 933 (1075)
..|.+......|+|.|+|.|.|..|...+. +.|.|.++|..
T Consensus 164 ~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~ 206 (212)
T 2v9r_A 164 GGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSF 206 (212)
T ss_dssp TTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred CCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchH
Confidence 246667777889999999999999997764 78888766543
No 132
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.86 E-value=1.2e-21 Score=199.09 Aligned_cols=169 Identities=14% Similarity=0.212 Sum_probs=130.7
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCe-EEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPK-VSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~-v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
.+|.+...+.+..+.+|+++.|.|.+.+.|.+. ++|+|+|..+.... ..|.|.+++.+|+|.|+|.|.
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~-----------~~L~i~~v~~~D~G~Y~C~a~ 74 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA-----------SSYFIDAATVDDSGEYRCQTQ 74 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS-----------SEEEESSCCGGGCEEEEEEET
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc-----------cEEEEecccccCCEEEEEEeC
Confidence 456777777777899999999999999998776 99999999886543 379999999999999999999
Q ss_pred eCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEcc-CCCeeEEEECCEEcCC-CCeeEEEECCCCce
Q psy16863 826 NDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGV-PQPTLKWFKDGRELKA-GDIHKIISGEDGTC 903 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~-p~p~v~W~k~g~~l~~-~~~~~i~~~~~~~~ 903 (1075)
|.. ....+.|.|..++ .+.......+.+|+.++|.|.+.+. |.+.|+|+|||..+.. .....|.+......
T Consensus 75 n~~--~s~~~~l~V~~~p-----~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~L~i~~v~~~ 147 (204)
T 3sgj_C 75 LST--LSDPVQLEVHIGW-----LLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLK 147 (204)
T ss_dssp TSB--CCCCEEEEEECSS-----EEEECSCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGG
T ss_pred CCc--ccccEEEEEecCc-----eEecCCceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecccCCceEEECcCCcc
Confidence 853 3346677777543 3344444557799999999999766 5588999999998753 22345677888889
Q ss_pred eeEEEEEEEEe-CCeeEEEEEEEEEecCChh
Q psy16863 904 CLGIYTCEAHN-CMGTTSSSAALLGFEDKSQ 933 (1075)
Q Consensus 904 d~G~Y~C~a~N-~~G~~~~~~~l~v~~~~~~ 933 (1075)
|+|.|+|.|.| ..|..+..+.|.|.+++..
T Consensus 148 D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~ 178 (204)
T 3sgj_C 148 DSGSYFCRGLVGSKNVSSETVQITITQGLAV 178 (204)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred cCEEEEEEEEeCCCceecCcEEEEEeCcCCC
Confidence 99999999999 5566667788888766543
No 133
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.86 E-value=4.4e-21 Score=193.67 Aligned_cols=175 Identities=25% Similarity=0.450 Sum_probs=144.7
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCC-CCcEEEEEcCCEEEEEEcccCCCCceeEEEEEE
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEE-NKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~-~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
+.+|.|...+.+..+.+|++++|.|.+.+.|.+.+.|+|+|..+.. ..++.+..++. .|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQ--LLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGT--EEEESSCCGGGCEEEEEEEE
T ss_pred CCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCcc--EEEEcCCCcccCeEEEEEEE
Confidence 4577888888888999999999999999988899999999998865 45666666665 58999999999999999999
Q ss_pred eCCCc-eeeEEEEEeecCCCCCCCeeeeec-ceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCCEE------EEEe
Q psy16863 426 NAVGR-SHCSCELSVLVPKAYKAPFFTKEL-EAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGDIF------ALTA 497 (1075)
Q Consensus 426 n~~g~-~~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~~~------~l~i 497 (1075)
|..|. ......|.|..+|. +...+ ...+.+|+.+.|.|.+.|.|.+.++|++++..+..+.++ .|.|
T Consensus 83 ~~~~~~~~~~~~l~v~~~p~-----~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i 157 (192)
T 2iep_A 83 NGVGGAVESCGALQVKMKPK-----ITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRI 157 (192)
T ss_dssp CSSSCCEEEEEEEEEEEEEE-----EEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEE
T ss_pred cCCCceeEeEEEEEEEeCCc-----cccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEE
Confidence 99887 45567788876543 33333 234789999999999999999999999999998765543 5889
Q ss_pred CCCCCCCcEEEEEEEEecceeeEE-EEEEEEe
Q psy16863 498 NPKDPSSLGTYTCEAVNCMGAAFS-TSRVIAR 528 (1075)
Q Consensus 498 ~~~~~~d~G~Y~C~a~n~~g~~~~-~~~v~v~ 528 (1075)
..+..+|+|.|+|.|.|..|...+ .+.|.|.
T Consensus 158 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 189 (192)
T 2iep_A 158 HNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVE 189 (192)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred ecCChhhCEEEEEEEEcCCCcEEEEEEEEEEE
Confidence 999999999999999999998843 5677775
No 134
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.86 E-value=1.6e-20 Score=188.89 Aligned_cols=170 Identities=18% Similarity=0.332 Sum_probs=138.5
Q ss_pred eeeecCceeeccCCeEEEEEEEecCCCcEEEEEE-CCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCc
Q psy16863 352 FIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYR-NDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGR 430 (1075)
Q Consensus 352 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k-~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~ 430 (1075)
|...+.+..+.+|+++.|.|.+.+.|. .+.|+| +|..+....++.+..++....|.|.+++.+|+|.|+|.+.|..|.
T Consensus 5 ~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 83 (189)
T 2v44_A 5 VTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQ 83 (189)
T ss_dssp EEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSC
T ss_pred EEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCC
Confidence 445567788999999999999988876 999999 888888888898888888889999999999999999999999887
Q ss_pred e-eeEEEEEeecCCCCCCCeeeee-cceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccC--CCE------EEEEeCCC
Q psy16863 431 S-HCSCELSVLVPKAYKAPFFTKE-LEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKA--GDI------FALTANPK 500 (1075)
Q Consensus 431 ~-~~s~~l~V~~~~~~~~p~~~~~-~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~--~~~------~~l~i~~~ 500 (1075)
. ...+.|.|..+|. +... ....+.+|+.+.|.|.+.|.|.|.++|+|++..+.. +.+ ..|.|..+
T Consensus 84 ~~~~~~~l~v~~~p~-----~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v 158 (189)
T 2v44_A 84 TQEATVVLEIYQKLT-----FREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNI 158 (189)
T ss_dssp EEEEEEEEEEECCCE-----EESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTC
T ss_pred cEEEEEEEEEecCCc-----eeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEc
Confidence 6 5567777766542 3222 223478999999999999999999999999998752 222 26899999
Q ss_pred CCCCcEEEEEEEEecceeeEEEEEEEE
Q psy16863 501 DPSSLGTYTCEAVNCMGAAFSTSRVIA 527 (1075)
Q Consensus 501 ~~~d~G~Y~C~a~n~~g~~~~~~~v~v 527 (1075)
..+|+|.|+|.|.|..|.......+.|
T Consensus 159 ~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 159 NKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred CcccCeEEEEEEEccccCceeeeeEEE
Confidence 999999999999999977665555554
No 135
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.86 E-value=1.8e-21 Score=192.31 Aligned_cols=155 Identities=19% Similarity=0.228 Sum_probs=119.9
Q ss_pred eeeecCCeEEEEEEEec--CCCCeEEEEECCEEee----------cCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 758 CQATVNEEFKFTVQVSI--SPEPKVSWFRDDQQVV----------ESDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 758 ~~~~~g~~~~l~C~v~g--~p~p~v~W~k~g~~i~----------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
+.+.+|+++.|.|.... .|.+.|+|+|++..|. ...++.+. .++ .|.|.+++.+|+|.|+|.|.
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~--~~g--sL~I~~v~~~D~G~Y~C~~~ 81 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEIL--ANG--DLKIKNLTRDDSGTYNVTVY 81 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEEC--TTS--CEEESSCCGGGCEEEEEEEE
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEEC--CCC--cEEEcccccccCEEEEEEEE
Confidence 55789999999995433 5677999999997653 34556552 233 49999999999999999999
Q ss_pred eCCceE--EEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCeeEEEECCCCce
Q psy16863 826 NDFGQS--ITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDIHKIISGEDGTC 903 (1075)
Q Consensus 826 N~~G~~--~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~~~i~~~~~~~~ 903 (1075)
|..|.. ...+.|.|..++ ..|.+.. .+..++|.|.+.|.|.|.|+|+|||.+|..+.+..|.. ....
T Consensus 82 n~~g~~~~~~~~~l~V~~~~--~~p~i~~-------~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~~~i~~--~~~~ 150 (176)
T 1hng_A 82 STNGTRILNKALDLRILEMV--SKPMIYW-------ECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSY--QWTN 150 (176)
T ss_dssp ETTCCEEEEEEEEEEEECCC--CCCEEEE-------ETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEE--ECSC
T ss_pred eCCCCEEEEEEEEEEEeCCC--CCCEEEe-------cCCcEEEEEEecCCCCcEEEEEECCEECCCCCcEEEEE--EEcc
Confidence 999987 555666666532 3344321 24459999999999999999999999998776665543 3367
Q ss_pred eeEEEEEEEEeCCeeEEEEEEEEE
Q psy16863 904 CLGIYTCEAHNCMGTTSSSAALLG 927 (1075)
Q Consensus 904 d~G~Y~C~a~N~~G~~~~~~~l~v 927 (1075)
|+|.|+|.|.|.+|..++.+.|.+
T Consensus 151 d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 151 LRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp CSSCEEEEEEETTEEEEEEECCCC
T ss_pred CCeEEEEEEEecCCCceecccccC
Confidence 899999999999999998877654
No 136
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.85 E-value=4.6e-21 Score=195.19 Aligned_cols=171 Identities=14% Similarity=0.187 Sum_probs=126.9
Q ss_pred ccceeeeecCCeEEEEEEEecCCC-----CeEEEEE-CCEEeecCCcEEEEEe--eCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 754 GLKSCQATVNEEFKFTVQVSISPE-----PKVSWFR-DDQQVVESDNVKILKE--TLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 754 ~~~~~~~~~g~~~~l~C~v~g~p~-----p~v~W~k-~g~~i~~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
+.....+.+|+++.|.|.+.+.|. +.+.|+| ++.......++.+..+ ..+...|.|.+++.+|+|.|+|.|.
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 334567899999999999999887 8999999 5555555556655432 1245789999999999999999999
Q ss_pred eCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcC-------CCCeeEEEEC
Q psy16863 826 NDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELK-------AGDIHKIISG 898 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~-------~~~~~~i~~~ 898 (1075)
|..|.....+.|.|..++ ..|.+.. ..+.+|+.+.|.|.+.|.|.|.|+|+|++.++. .+....+.+.
T Consensus 88 ~~~~~~~~~~~l~V~~~~--~~p~~~~---~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~ 162 (202)
T 3bp6_B 88 CGAAWDYKYLTVKVKASY--MRIDTRI---LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVL 162 (202)
T ss_dssp ETTEEEEEEEEEEEEBCC--CCEEEEE---EECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEE
T ss_pred eCCCcceEEEEEEecCCC--CcccEEE---EecCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEEEEEE
Confidence 999988778888887653 2333221 124689999999999999999999999987653 1222223233
Q ss_pred CCCceeeEEEEEEEEeCCeeEEEEEEEEEec
Q psy16863 899 EDGTCCLGIYTCEAHNCMGTTSSSAALLGFE 929 (1075)
Q Consensus 899 ~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 929 (1075)
.....|+|.|+|.|.|.+|..+.++.|.+.+
T Consensus 163 ~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~ 193 (202)
T 3bp6_B 163 RLKPQPSRNFSCMFWNAHMKELTSAIIDPLS 193 (202)
T ss_dssp EECCCTTCCEEEEEEETTTTEEEEEEECC--
T ss_pred EEEcCCCCEEEEEEEcCCcccccEEEEEecC
Confidence 3445679999999999999999988887643
No 137
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.85 E-value=1.1e-20 Score=190.21 Aligned_cols=172 Identities=17% Similarity=0.326 Sum_probs=135.2
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCC--CCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEE--NKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~--~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
+|.|...+.+..+.+|+++.|.|.+.+.|.+.+.|+|++..+.. ..++.+..++ .|.|.+++.+|+|.|+|.+.|
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~~~~ 78 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRV 78 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCC---CEEEeeCCHhHCcEEEEEEEE
Confidence 67888888999999999999999999999999999999988763 3455544444 389999999999999999999
Q ss_pred CCCcee--eEEEEEeecCCCCCCCeeeeec---ceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCCEE-------E
Q psy16863 427 AVGRSH--CSCELSVLVPKAYKAPFFTKEL---EAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGDIF-------A 494 (1075)
Q Consensus 427 ~~g~~~--~s~~l~V~~~~~~~~p~~~~~~---~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~~~-------~ 494 (1075)
..+... ....+.|..+|. +.... ...+.+|+.+.|.|.+.|.|.+.+.|+++|..+..+..+ .
T Consensus 79 ~~~~~~~~~~~~l~v~~~p~-----~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~ 153 (189)
T 2v5t_A 79 EARGEIDFRDIIVIVNVPPA-----ISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTE 153 (189)
T ss_dssp TTTTEEEEEEEEEEEEEEEE-----EECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTE
T ss_pred cCCCceEEEEEEEEecCCCC-----cccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCE
Confidence 876544 344555555442 22111 223568999999999999999999999999998765433 5
Q ss_pred EEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEe
Q psy16863 495 LTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIAR 528 (1075)
Q Consensus 495 l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~ 528 (1075)
|.|..+..+|+|.|+|.|.|..|....++.|.|.
T Consensus 154 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 154 LTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 8899999999999999999999999988888875
No 138
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.85 E-value=3.8e-21 Score=197.63 Aligned_cols=171 Identities=25% Similarity=0.364 Sum_probs=131.0
Q ss_pred CeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEee------------cCCcEEEEEeeCcEEEEEEccccCCC
Q psy16863 749 PKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVV------------ESDNVKILKETLGVCHLKIHALEVAD 816 (1075)
Q Consensus 749 p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~------------~~~~~~~~~~~~~~~~L~I~~~~~~D 816 (1075)
+.|...+.+..+.+|+++.|.|.+.+.|.+.+.|+|++..+. ...++.+.. ..|.|.+++.+|
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~L~i~~v~~~D 76 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS-----SGITFSSVTRKD 76 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET-----TEEEESCCCGGG
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec-----eeEEEcccCccc
Confidence 345566677889999999999999999999999999886631 234444431 479999999999
Q ss_pred CeEEEEEEEeCCc--eEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEE-EEccCCCeeEEEECCE-EcCCCC-
Q psy16863 817 QAEWKCIATNDFG--QSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECK-VIGVPQPTLKWFKDGR-ELKAGD- 891 (1075)
Q Consensus 817 ~G~Y~C~A~N~~G--~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~-v~g~p~p~v~W~k~g~-~l~~~~- 891 (1075)
+|.|+|.|.|..| ....++.|.|..++.+ +... ....+.+|+.++|.|. +.|.|.|.|+|+|+|. ++..+.
T Consensus 77 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~--~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~ 152 (212)
T 1f97_A 77 NGEYTCMVSEEGGQNYGEVSIHLTVLVPPSK--PTIS--VPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAK 152 (212)
T ss_dssp CEEEEEEEEETTSSSEEEEEEEEEEEBCCCC--CEEE--CCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC----
T ss_pred CeEEEEEEEccCCCcccEEEEEEEEEcCCCC--cccC--CccccCCCCeEEEEEEcccCcCCCEEEEEeCCccccccccc
Confidence 9999999999987 5566777888776543 2221 1234678999999999 7999999999999999 776432
Q ss_pred ---------------eeEEEECCCCceeeEEEEEEEEeCCeeE--EEEEEEEEe
Q psy16863 892 ---------------IHKIISGEDGTCCLGIYTCEAHNCMGTT--SSSAALLGF 928 (1075)
Q Consensus 892 ---------------~~~i~~~~~~~~d~G~Y~C~a~N~~G~~--~~~~~l~v~ 928 (1075)
...|.+......|+|.|+|.|.|..|.. +..+.|.|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 153 KTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp -CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred ccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 2346667777889999999999999998 344555554
No 139
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.85 E-value=2.9e-20 Score=187.39 Aligned_cols=174 Identities=16% Similarity=0.288 Sum_probs=137.8
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCC-CcEEEEEE-CCEecC-CCCcEEEEE-cCCEEEEEEcccCCCCceeEEEEE
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPT-EIKIHWYR-NDRKLE-ENKIYRTQH-DGNFYFIDLSSVSLFDSGRWTCLA 424 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p-~~~v~W~k-~g~~l~-~~~~~~~~~-~g~~~~L~I~~v~~~d~G~Y~C~a 424 (1075)
|+.|...+.+..+.+|++++|.|.+.+.+ .+.+.|+| +|..+. ...++.+.. ++....|.|.+++.+|+|.|+|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 56677788889999999999999998876 88999999 888876 445555543 356678999999999999999999
Q ss_pred EeCCC-ceeeEEEEEeecCCCCCCCeeeeec-ceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCC--E------EE
Q psy16863 425 ENAVG-RSHCSCELSVLVPKAYKAPFFTKEL-EAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGD--I------FA 494 (1075)
Q Consensus 425 ~n~~g-~~~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~--~------~~ 494 (1075)
.|..| .....+.|.|..++ .+...+ ...+.+|+.+.|.|.+.|.|.+.+.|++++..+.... + ..
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p-----~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 156 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKL-----MFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY 156 (191)
T ss_dssp EETTTEEEEEEEEEEEECCS-----EEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSC
T ss_pred EcCCCcceEEEEEEEeecCc-----eEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCe
Confidence 99984 44556666665443 444333 3347899999999999999999999999999985321 1 16
Q ss_pred EEeCCCCCCCcEEEEEEEEecceeeEEEEEEEE
Q psy16863 495 LTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIA 527 (1075)
Q Consensus 495 l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v 527 (1075)
|.|..+..+|+|.|+|.|.|..|.......+.|
T Consensus 157 L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 157 LQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp EEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred EEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 899999999999999999999976655555554
No 140
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.85 E-value=1.4e-21 Score=217.47 Aligned_cols=174 Identities=18% Similarity=0.227 Sum_probs=142.9
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCe-EEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQA-EWKCIAT 825 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G-~Y~C~A~ 825 (1075)
.+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+....... .......|.|.+++.+|+| .|+|.|.
T Consensus 157 ~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~---~~~~~~~L~i~~v~~~D~G~~Y~C~a~ 233 (347)
T 2ifg_A 157 GVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKS---GGLPSLGLTLANVTSDLNRKNVTCWAE 233 (347)
T ss_dssp CCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCC---CCSSEEEEEEESCCSTTTTCCEEECCE
T ss_pred CCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccc---eecccceEEEeeCChHHCCCeEEEEEE
Confidence 58899888888899999999999999999999999999997654322111 1234568999999999999 9999999
Q ss_pred eCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCe-------------
Q psy16863 826 NDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDI------------- 892 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~------------- 892 (1075)
|..|....++.|.|..+|.+ +.. ...+|+.++|.|.+.|.|.|.|+|+|+|..+..+..
T Consensus 234 n~~g~~~~~~~l~V~~~P~i----~~~----~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~ 305 (347)
T 2ifg_A 234 NDVGRAEVSVQVNVSFPASV----QLH----TAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANET 305 (347)
T ss_dssp ETTEECCEEECCCCBEEEEE----EEC----CCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCC
T ss_pred cCCCCEEEEEEEEEcCCCee----eec----cCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCc
Confidence 99999888888888765432 121 134789999999999999999999999999986543
Q ss_pred ---eEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEecCC
Q psy16863 893 ---HKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFEDK 931 (1075)
Q Consensus 893 ---~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 931 (1075)
..|.+......|+|.|+|.|.|.+|.+++++.|.|.++|
T Consensus 306 ~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 306 VRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp CEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred ccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 236677777889999999999999999999999887654
No 141
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.85 E-value=3.5e-21 Score=194.80 Aligned_cols=165 Identities=11% Similarity=0.064 Sum_probs=115.3
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+. ..+.+|++++|.|.+.+.|. .+.|+|+|..+...... .........|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~--~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 2d3v_A 4 SKATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQN--PLEPKNKARFSIPSMTEHHAGRYRCYYYS 79 (196)
T ss_dssp CBCEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEEC--CCSSTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCccccc--ccCCccccEEEeccCChhHCeEEEEEEeC
Confidence 4777877665 47889999999999998776 99999999877532110 00123456899999999999999999999
Q ss_pred CCceEE--EEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCC-----------CCee
Q psy16863 827 DFGQSI--TSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKA-----------GDIH 893 (1075)
Q Consensus 827 ~~G~~~--~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~-----------~~~~ 893 (1075)
..|... ..+.|.|..+ ..+|.+.......+.+|+.++|.|.+.+.| +.|+|+|||..+.. +...
T Consensus 80 ~~g~~~~s~~~~l~V~~~--~~~p~i~~~~~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~ 156 (196)
T 2d3v_A 80 PAGWSEPSDPLELVVTGF--YNKPTLSALPSPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQA 156 (196)
T ss_dssp TTEECBCCCCEEEEEECS--SCCCEEEC-----------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEE
T ss_pred CCCcCCcCccEEEEecCC--CCCCeEEccCCccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCcee
Confidence 987543 3456666542 234555443334578999999999999998 89999999988742 1235
Q ss_pred EEEECCCCceeeEEEEEEEEeCCee
Q psy16863 894 KIISGEDGTCCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 894 ~i~~~~~~~~d~G~Y~C~a~N~~G~ 918 (1075)
.|.+......|+|.|+|.|.|..+.
T Consensus 157 ~L~I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 157 LFPVGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp EEECCCCBTTBCEEEEEEEEETTEE
T ss_pred EEEeeecCcccCeeEEEEEEccCCC
Confidence 6777788889999999999998764
No 142
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.85 E-value=4e-21 Score=194.47 Aligned_cols=164 Identities=13% Similarity=0.133 Sum_probs=124.5
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+.. .+.+|++++|.|.+.+ |.+.+.|+|+|..+....... ........|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~--~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNP--LEPKNKARFSIPSMTEDYAGRYRCYYRS 79 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECC--CSSSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccccccc--ccCCceEEEEeccCCcccCceEEEEEeC
Confidence 47777776666 7899999999999998 778999999998775421111 1112356899999999999999999999
Q ss_pred CCceE--EEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCC----------CeeE
Q psy16863 827 DFGQS--ITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAG----------DIHK 894 (1075)
Q Consensus 827 ~~G~~--~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~----------~~~~ 894 (1075)
..|.. +..+.|.|..+ ..+|.+.......+.+|+.++|.|.+.+. .+.+.|+|||..+... ....
T Consensus 80 ~~g~~~~s~~~~l~V~~~--~~~p~~~~~~~~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~ 156 (196)
T 3p2t_A 80 PVGWSQPSDPLELVMTGA--YSKPTLSALPSPLVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQAE 156 (196)
T ss_dssp TTEEBCCCCCEEEEEECS--SCCCEEEEESCSEECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEEE
T ss_pred CCcccCCCccEEEEecCC--CCCCEEEeCCcceecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcceE
Confidence 99843 33455555532 34566655444467899999999999884 5689999999876432 2345
Q ss_pred EEECCCCceeeEEEEEEEEeCCe
Q psy16863 895 IISGEDGTCCLGIYTCEAHNCMG 917 (1075)
Q Consensus 895 i~~~~~~~~d~G~Y~C~a~N~~G 917 (1075)
|.+......|+|.|+|.|.|..+
T Consensus 157 L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 157 FPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEECSCCGGGCEEEEEEEECGGG
T ss_pred EEeCCCcccCCCeEEEEEEcCCC
Confidence 77778888999999999999987
No 143
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.85 E-value=3.9e-21 Score=203.77 Aligned_cols=195 Identities=18% Similarity=0.215 Sum_probs=120.9
Q ss_pred ecCCCceEEEEEEecCceEEEEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCC----
Q psy16863 701 GTSSLGSYCCVAKNVMGKAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISP---- 776 (1075)
Q Consensus 701 ~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p---- 776 (1075)
..+|+|.|+|.|. |.....+.+.+. .+|.+...+....+.+|++++|.|.+.+.|
T Consensus 12 ~~~dsg~Y~C~a~---g~~~~~~~~~~~------------------~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~ 70 (254)
T 2c1o_A 12 RPGTSVKLSCKAS---GYSFTNYWMNWL------------------RELVMTQSPLTLSVTIGQPASISCKSSQSLLYSN 70 (254)
T ss_dssp -----------------------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSS
T ss_pred cCCccEEEEEcCc---hhhhhhhhhhee------------------eceeEEeCCceEEecCCCcEEEEeeccCcccccC
Confidence 3469999999998 554444444333 367777778888999999999999999988
Q ss_pred -CCeEEEEEC--CEEee------------cCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEE-EEEEEEE
Q psy16863 777 -EPKVSWFRD--DQQVV------------ESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSIT-SCFLKLN 840 (1075)
Q Consensus 777 -~p~v~W~k~--g~~i~------------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~-s~~l~V~ 840 (1075)
.+.|.|+|+ |..+. ...++.+.. ..+...|.|.+++.+|+|.|+|.|.|..+.... ...|.|.
T Consensus 71 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~ 149 (254)
T 2c1o_A 71 GKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSG-SGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELK 149 (254)
T ss_dssp SCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEEC
T ss_pred CCCceEEEEeCCCCCceEEEEeccccCCCccceEEEec-CCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEEC
Confidence 489999984 33221 125666654 445779999999999999999999998664322 2356664
Q ss_pred ecCCCCCCeeeeecc-eeecCCCeEEEEEEEEccCC--CeeEEEECCEEcCCC-----------C-----eeEEEECCCC
Q psy16863 841 VPKHYKKPKFLEELK-AVLSEGGAVNLECKVIGVPQ--PTLKWFKDGRELKAG-----------D-----IHKIISGEDG 901 (1075)
Q Consensus 841 ~~~~~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~p~--p~v~W~k~g~~l~~~-----------~-----~~~i~~~~~~ 901 (1075)
.+ ..+|.+..... .....|+.++|.|.+.|.|+ +.|+|+|||.++..+ + ...|.+....
T Consensus 150 ~~--~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~ 227 (254)
T 2c1o_A 150 RA--DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDE 227 (254)
T ss_dssp CC--CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHH
T ss_pred CC--CCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEecccc
Confidence 32 23455443221 12335789999999998544 459999999988765 1 1234444445
Q ss_pred ceeeEEEEEEEEeCCeeE
Q psy16863 902 TCCLGIYTCEAHNCMGTT 919 (1075)
Q Consensus 902 ~~d~G~Y~C~a~N~~G~~ 919 (1075)
..|+|.|+|.|.|.....
T Consensus 228 ~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 228 YERHNSYTCEATHKTSTS 245 (254)
T ss_dssp HHTCCEEEEEEECTTCSS
T ss_pred ccCCCeEEEEEEcCCCCC
Confidence 568999999999987753
No 144
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.85 E-value=4.6e-21 Score=196.69 Aligned_cols=178 Identities=15% Similarity=0.133 Sum_probs=128.8
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEE--EEEEccccCCCCeEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVC--HLKIHALEVADQAEWKCIA 824 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~--~L~I~~~~~~D~G~Y~C~A 824 (1075)
.+|.|...+. ..+.+|++++|.|.+.+ |.+.+.|+|+|..+........ ...... .|.|.+++.+|+|.|+|.|
T Consensus 8 ~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a 83 (218)
T 1uct_A 8 PMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRL--KFWNETDPEFVIDHMDANKAGRYQCQY 83 (218)
T ss_dssp CCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEEC--C----CCCEEEECSCCGGGCEEEEEEE
T ss_pred CCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccC--CCCcceeeEEEEcccccccCEEEEEEE
Confidence 5778877665 47899999999999987 7889999999987653322110 011123 7999999999999999999
Q ss_pred EeCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCC-----CCeeEEEECC
Q psy16863 825 TNDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKA-----GDIHKIISGE 899 (1075)
Q Consensus 825 ~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~-----~~~~~i~~~~ 899 (1075)
.|..|....+..+.+.+.....+|.+.......+.+|+.++|.|.+.+.|.+.+.|+|||..+.. +....|.+..
T Consensus 84 ~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~ 163 (218)
T 1uct_A 84 RIGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGP 163 (218)
T ss_dssp EETTTEEEECCCEEEEEECSSCCCEEEESSCSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEEEECCS
T ss_pred EcCCCceeecCCEEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCEEEEcc
Confidence 99987555443344433333345665544445678999999999777888899999999987753 2345677788
Q ss_pred CCceeeEEEEEEEEeCCe-----eEEEEEEEEEe
Q psy16863 900 DGTCCLGIYTCEAHNCMG-----TTSSSAALLGF 928 (1075)
Q Consensus 900 ~~~~d~G~Y~C~a~N~~G-----~~~~~~~l~v~ 928 (1075)
....|+|.|+|.|.|..+ ..+..+.|.|.
T Consensus 164 v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (218)
T 1uct_A 164 VDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVT 197 (218)
T ss_dssp CCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC
T ss_pred CCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEe
Confidence 888999999999999642 22334555554
No 145
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.85 E-value=1.3e-20 Score=186.56 Aligned_cols=165 Identities=15% Similarity=0.206 Sum_probs=128.9
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCe-EEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPK-VSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~-v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
.+|.+...+....+.+|+++.|.|.+.+.|.+. +.|+|+|..+... ...|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~-----------~~~L~i~~~~~~d~G~Y~C~~~ 74 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ-----------ASSYFIDAATVNDSGEYRCQTN 74 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESS-----------CSEEEESSCCGGGCEEEEEECS
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCC-----------ceEEEEeCCCcccCEEEEEEee
Confidence 577887777777899999999999999988776 8999999988642 2379999999999999999999
Q ss_pred eCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCC-eeEEEECCEEcCCC-CeeEEEECCCCce
Q psy16863 826 NDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQP-TLKWFKDGRELKAG-DIHKIISGEDGTC 903 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p-~v~W~k~g~~l~~~-~~~~i~~~~~~~~ 903 (1075)
|..+. ..+.|.|..+ +.........+.+|+.++|.|.+.+.|++ .|+|+|||.++... ....|.+......
T Consensus 75 n~~~s--~~~~l~V~~~-----~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~~~~~~L~i~~v~~~ 147 (175)
T 1fnl_A 75 LSTLS--DPVQLEVHIG-----WLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLK 147 (175)
T ss_dssp SSCCC--CCEEEEEECS-----SEEEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEEEECCCEEESSCCGG
T ss_pred CCccc--ccEEEEEeCC-----CceeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCCCCCCEEEEcccChh
Confidence 96664 3566666632 22333334457799999999999988765 99999999988532 2345677788889
Q ss_pred eeEEEEEEEEeCCee-EEEEEEEEEec
Q psy16863 904 CLGIYTCEAHNCMGT-TSSSAALLGFE 929 (1075)
Q Consensus 904 d~G~Y~C~a~N~~G~-~~~~~~l~v~~ 929 (1075)
|+|.|+|.|.|..|. .+..+.|.|.+
T Consensus 148 d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 148 DSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred hCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 999999999997764 44566666653
No 146
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.84 E-value=1e-20 Score=194.66 Aligned_cols=172 Identities=15% Similarity=0.255 Sum_probs=132.3
Q ss_pred cceeeeecCCeEEEEEEEecCC----CCeEEEEE----------------CCEEeec-----CCcEEEEE--eeCcEEEE
Q psy16863 755 LKSCQATVNEEFKFTVQVSISP----EPKVSWFR----------------DDQQVVE-----SDNVKILK--ETLGVCHL 807 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g~p----~p~v~W~k----------------~g~~i~~-----~~~~~~~~--~~~~~~~L 807 (1075)
...+.+.+|+++.|.|.+.+.| .+.+.|+| ++..+.. ..++.+.. ...+...|
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L 86 (214)
T 3jz7_A 7 EQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASI 86 (214)
T ss_dssp EEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCE
T ss_pred CceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccE
Confidence 3456789999999999999887 46999998 4444432 33444422 11234579
Q ss_pred EEccccCCCCeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEE-EccCCCeeEEEEC--C
Q psy16863 808 KIHALEVADQAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKV-IGVPQPTLKWFKD--G 884 (1075)
Q Consensus 808 ~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v-~g~p~p~v~W~k~--g 884 (1075)
.|.+++.+|+|.|+|.|.|..|....++.|.|..++.+. .... ...+.+|+.++|.|.+ .|.|.|.|+|+|+ +
T Consensus 87 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~--~~~~--~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~ 162 (214)
T 3jz7_A 87 NVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGT--RCFV--DGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDS 162 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSC--EEEE--ESCCBTTCCEEEEEECSBCCSSCEEEEEECSTT
T ss_pred EEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCc--eeee--ecceecCCcEEEEecCCCCCCCCEEEEEECCCC
Confidence 999999999999999999999998889999998765432 2211 2236789999999999 8999999999995 4
Q ss_pred EEcCCC-----CeeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEecC
Q psy16863 885 RELKAG-----DIHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFED 930 (1075)
Q Consensus 885 ~~l~~~-----~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~ 930 (1075)
..+..+ ....|.+......|+|.|+|.|.|.+|..++++.|.|.++
T Consensus 163 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 163 QTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp CCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred CccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 444321 2336777888889999999999999999999999988744
No 147
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.84 E-value=1e-20 Score=187.71 Aligned_cols=167 Identities=19% Similarity=0.213 Sum_probs=128.7
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCC-eEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEP-KVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p-~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
.+|.+...+....+.+|+++.|.|.+.+.|.+ .++|+|+|..+... ...|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~-----------~~~L~i~~v~~~d~G~Y~C~~~ 71 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET-----------NSSLNIVNAKFEDSGEYKCQHQ 71 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC-----------SSEEEECSCCGGGCEEEEEECT
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC-----------ceEEEEeccceecCEEEEEEcC
Confidence 47788888888889999999999999998875 69999999988642 2379999999999999999999
Q ss_pred eCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEE-ccCCCeeEEEECCEEcCC-CCeeEEEECCCCce
Q psy16863 826 NDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVI-GVPQPTLKWFKDGRELKA-GDIHKIISGEDGTC 903 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~-g~p~p~v~W~k~g~~l~~-~~~~~i~~~~~~~~ 903 (1075)
|..+.. .+.|.|..+ +.........+.+|+.++|.|.+. +.|.+.|+|+|||..+.. .....|.+......
T Consensus 72 ~~~~s~--~~~l~V~~~-----~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~ 144 (176)
T 1f2q_A 72 QVNESE--PVYLEVFSD-----WLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVE 144 (176)
T ss_dssp TSSCCC--CEEEEEECS-----SEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCCCSSEEEESSCCGG
T ss_pred Cccccc--cEEEEEeCc-----ceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeecCCCeEEECCCCcc
Confidence 977654 456666632 233333444577999999999995 566679999999999853 23556777888889
Q ss_pred eeEEEEEEEEeCCee-EEEEEEEEEecCC
Q psy16863 904 CLGIYTCEAHNCMGT-TSSSAALLGFEDK 931 (1075)
Q Consensus 904 d~G~Y~C~a~N~~G~-~~~~~~l~v~~~~ 931 (1075)
|+|.|+|.|.|..|. .+..+.|.|..+|
T Consensus 145 d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p 173 (176)
T 1f2q_A 145 DSGTYYCTGKVWQLDYESEPLNITVIKAP 173 (176)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEECSC
T ss_pred cCEEEEEEEEeCCcceEecCEEEEEecCC
Confidence 999999999997554 4445777776554
No 148
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.84 E-value=1.9e-20 Score=196.76 Aligned_cols=183 Identities=21% Similarity=0.318 Sum_probs=141.9
Q ss_pred CCCeeeeec----CceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcE-EEEEcCCEEEEEEcccCCCCceeEEE
Q psy16863 348 DAPAFIRRL----HDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIY-RTQHDGNFYFIDLSSVSLFDSGRWTC 422 (1075)
Q Consensus 348 ~~p~~~~~~----~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~-~~~~~g~~~~L~I~~v~~~d~G~Y~C 422 (1075)
.+|.|+.++ ....+.+|+++.|.|.+.+.|.+.|.|+|+|..+....+. ..........|.|.+++.+|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 367776543 4678999999999999999999999999999998654332 11112222358999999999999999
Q ss_pred EEEeCCCceeeEEEEEeecCCCCCCCeeeeec-ceEEecCCeEEEEEEEECCCCCeEEEEe----CCEeccCCC------
Q psy16863 423 LAENAVGRSHCSCELSVLVPKAYKAPFFTKEL-EAILTEQGTVSLECKVMGIPTPQLIWYK----DNKKIKAGD------ 491 (1075)
Q Consensus 423 ~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~v~l~C~~~g~p~~~v~W~~----~g~~l~~~~------ 491 (1075)
.|.|..|....+..|.|...+...++.+.... ...+.+|+.+.|.|.+.|.|.+.+.|++ +|..+..+.
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~ 169 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTV 169 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEE
T ss_pred EEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeee
Confidence 99999998888888888775433222222222 2347789999999999999999999999 888775432
Q ss_pred -----------EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEecc
Q psy16863 492 -----------IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQ 530 (1075)
Q Consensus 492 -----------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~ 530 (1075)
...|.|..+..+|+|.|+|.|.|..|....++.|.|..+
T Consensus 170 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 219 (241)
T 3grw_A 170 LKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGP 219 (241)
T ss_dssp EEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC---
T ss_pred eeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCC
Confidence 346999999999999999999999999999998888743
No 149
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.84 E-value=5.1e-20 Score=189.78 Aligned_cols=174 Identities=18% Similarity=0.266 Sum_probs=141.9
Q ss_pred CCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEE
Q psy16863 346 VPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 346 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
....+.|...+.+..+.+|+++.|.|.+.+.|.+.|.|+|+|..+..... ..|.|.+++.+|+|.|+|.|.
T Consensus 15 ~~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~~~ 85 (218)
T 3k0w_A 15 VPRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNT---------SELIFNAVHVKDAGFYVCRVN 85 (218)
T ss_dssp ----CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCCS---------SEEEETTCCGGGCEEEEEEEE
T ss_pred cCCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCCC---------CEEEEccCChhhCeEeEEEEE
Confidence 34577888888999999999999999999999999999999998865421 358999999999999999999
Q ss_pred eCCCce-eeEEEEEeecCCCC----------CCCeeeeecc-eEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCCEE
Q psy16863 426 NAVGRS-HCSCELSVLVPKAY----------KAPFFTKELE-AILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGDIF 493 (1075)
Q Consensus 426 n~~g~~-~~s~~l~V~~~~~~----------~~p~~~~~~~-~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~~~ 493 (1075)
|..|.. ...+.|.|...+.. .+|.+...+. ..+.+|+.+.|.|.+.|.|.+.|.|+++|..+..+...
T Consensus 86 n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~~ 165 (218)
T 3k0w_A 86 NNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKK 165 (218)
T ss_dssp CTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCSS
T ss_pred cCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCCC
Confidence 998755 45577777765321 1244544444 34789999999999999999999999999999888888
Q ss_pred EEEeCCCCCCCcEEEEEEEEeccee-eEEEEEEEEe
Q psy16863 494 ALTANPKDPSSLGTYTCEAVNCMGA-AFSTSRVIAR 528 (1075)
Q Consensus 494 ~l~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~v~v~ 528 (1075)
.|.|..+..+|+|.|+|.|.|..|. ....+.|.|.
T Consensus 166 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 166 LYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEC
T ss_pred EEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEe
Confidence 9999999999999999999998887 4455666665
No 150
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.84 E-value=9.8e-21 Score=200.63 Aligned_cols=196 Identities=18% Similarity=0.290 Sum_probs=125.9
Q ss_pred cCCCCCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCC-----CcEEEEEECC--
Q psy16863 315 VRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPT-----EIKIHWYRND-- 387 (1075)
Q Consensus 315 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p-----~~~v~W~k~g-- 387 (1075)
++.+|+|.|+|.|. |.....+.+.+. .++.+...+..+.+.+|++++|.|.+.+.| .+.|.|||++
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~----~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g 83 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWL----RELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPG 83 (254)
T ss_dssp ----------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTT
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhhee----eceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCC
Confidence 67899999999998 444444444443 267777778889999999999999998877 4899999843
Q ss_pred Eec------------CCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCcee-eEEEEEeecCCCCCCCeeeeec
Q psy16863 388 RKL------------EENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSH-CSCELSVLVPKAYKAPFFTKEL 454 (1075)
Q Consensus 388 ~~l------------~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~-~s~~l~V~~~~~~~~p~~~~~~ 454 (1075)
..+ ....++.+...+....|.|.+++.+|+|.|+|.|.|..+... ....|.|.... .+|.+....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~--~~P~v~~~~ 161 (254)
T 2c1o_A 84 QSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRAD--AAPTVSIFP 161 (254)
T ss_dssp SCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCC--BCCEEEEEC
T ss_pred CCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCC--CCCeeEeec
Confidence 222 113577777777778899999999999999999999865432 23456665322 234444322
Q ss_pred -ceEEecCCeEEEEEEEECC-CC-CeEEEEeCCEeccCC-----------C-----EEEEEeCCCCCCCcEEEEEEEEec
Q psy16863 455 -EAILTEQGTVSLECKVMGI-PT-PQLIWYKDNKKIKAG-----------D-----IFALTANPKDPSSLGTYTCEAVNC 515 (1075)
Q Consensus 455 -~~~~~~g~~v~l~C~~~g~-p~-~~v~W~~~g~~l~~~-----------~-----~~~l~i~~~~~~d~G~Y~C~a~n~ 515 (1075)
.....+|+.++|.|.+.|. |+ +.|+|+|+|.++..+ + ...|.|..+..+|+|.|+|.|.|.
T Consensus 162 ~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 241 (254)
T 2c1o_A 162 PSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHK 241 (254)
T ss_dssp CCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECT
T ss_pred CChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcC
Confidence 2223467899999999884 44 369999999988655 1 236888888889999999999998
Q ss_pred ceee
Q psy16863 516 MGAA 519 (1075)
Q Consensus 516 ~g~~ 519 (1075)
....
T Consensus 242 ~~~~ 245 (254)
T 2c1o_A 242 TSTS 245 (254)
T ss_dssp TCSS
T ss_pred CCCC
Confidence 7543
No 151
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.84 E-value=7e-21 Score=201.39 Aligned_cols=172 Identities=12% Similarity=0.198 Sum_probs=125.2
Q ss_pred ccceeeeecCCeEEEEEEEec---CCCCeEEEEECCEEee------------------------------cCCcEEEEEe
Q psy16863 754 GLKSCQATVNEEFKFTVQVSI---SPEPKVSWFRDDQQVV------------------------------ESDNVKILKE 800 (1075)
Q Consensus 754 ~~~~~~~~~g~~~~l~C~v~g---~p~p~v~W~k~g~~i~------------------------------~~~~~~~~~~ 800 (1075)
+...+.+.+|+++.|.|.+.+ .|.+.|+|+|++.... ...++.+..
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~- 86 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN- 86 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC-
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc-
Confidence 345677999999999999998 8899999999875421 011222211
Q ss_pred eCcEEEEEEccccCCCCeEEEEEEEeCCceE-----EEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCC
Q psy16863 801 TLGVCHLKIHALEVADQAEWKCIATNDFGQS-----ITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQ 875 (1075)
Q Consensus 801 ~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~-----~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~ 875 (1075)
.+...|.|.+++.+|+|.|+|.|.|..+.. ..++.|.|..++....+.........+.+|+.++|.|.+.|.|.
T Consensus 87 -~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~ 165 (250)
T 2fbo_J 87 -LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCAN 165 (250)
T ss_dssp -TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTT
T ss_pred -CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCC
Confidence 123479999999999999999999987743 45777777665322222221111233668999999999999999
Q ss_pred CeeEEEECCEEcCCCC------------------------------eeEEEECCCCceeeEEEEEEEEe---CCeeEEEE
Q psy16863 876 PTLKWFKDGRELKAGD------------------------------IHKIISGEDGTCCLGIYTCEAHN---CMGTTSSS 922 (1075)
Q Consensus 876 p~v~W~k~g~~l~~~~------------------------------~~~i~~~~~~~~d~G~Y~C~a~N---~~G~~~~~ 922 (1075)
|.|+|+|+|.++.... ...|.+......|+|.|+|.|.| ..|....+
T Consensus 166 p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~ 245 (250)
T 2fbo_J 166 ANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSS 245 (250)
T ss_dssp CEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEE
T ss_pred CeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCcccee
Confidence 9999999998775421 14677778888999999999999 66666666
Q ss_pred EEEEE
Q psy16863 923 AALLG 927 (1075)
Q Consensus 923 ~~l~v 927 (1075)
+.|.|
T Consensus 246 ~~l~V 250 (250)
T 2fbo_J 246 TILKV 250 (250)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 66543
No 152
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.84 E-value=3.6e-20 Score=193.22 Aligned_cols=179 Identities=19% Similarity=0.322 Sum_probs=143.4
Q ss_pred CCeeeeec----CceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcE---EEEEcCCEEEEEEcccCCCCceeEE
Q psy16863 349 APAFIRRL----HDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIY---RTQHDGNFYFIDLSSVSLFDSGRWT 421 (1075)
Q Consensus 349 ~p~~~~~~----~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~---~~~~~g~~~~L~I~~v~~~d~G~Y~ 421 (1075)
+|.|...+ ....+.+|+++.|.|.+.+.|.+.|.|+|+|..+....++ ..... ...|.|.+++.+|+|.|+
T Consensus 15 ~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~ 92 (231)
T 3ojm_B 15 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQ--HWSLIMESVVPSDKGNYT 92 (231)
T ss_dssp EEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGG--GTEEEECSCCGGGCEEEE
T ss_pred CCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecC--cceEEEecCCcccCEEEE
Confidence 66676555 6788999999999999999999999999999998755432 22222 235899999999999999
Q ss_pred EEEEeCCCceeeEEEEEeecCCCCCCCeeee-ecceEEecCCeEEEEEEEECCCCCeEEEEe----CCEeccCCC-----
Q psy16863 422 CLAENAVGRSHCSCELSVLVPKAYKAPFFTK-ELEAILTEQGTVSLECKVMGIPTPQLIWYK----DNKKIKAGD----- 491 (1075)
Q Consensus 422 C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~----~g~~l~~~~----- 491 (1075)
|.|.|..|....+..|.|...+...++.+.. +....+.+|+.+.|.|.+.|.|.+.+.|++ +|..+..+.
T Consensus 93 C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~ 172 (231)
T 3ojm_B 93 CVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLK 172 (231)
T ss_dssp EEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEE
T ss_pred EEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEe
Confidence 9999999988888888888765433222222 223347899999999999999999999999 777764332
Q ss_pred -----------EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEec
Q psy16863 492 -----------IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARG 529 (1075)
Q Consensus 492 -----------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~ 529 (1075)
...|.|..+...|+|.|+|.|.|..|....++.|.|..
T Consensus 173 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 221 (231)
T 3ojm_B 173 VLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLP 221 (231)
T ss_dssp EEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEec
Confidence 12589999999999999999999999999999999874
No 153
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.84 E-value=5.8e-21 Score=193.61 Aligned_cols=164 Identities=15% Similarity=0.188 Sum_probs=119.2
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+. ..+.+|++++|.|.+.+.|. .++|+|+|..+....+...... ....|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~n 79 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELV--KKGQFPIPSITWEHTGRYRCYYGS 79 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHH--TTTEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCC--cccEEEECCCCHHHCeEEEEEEEC
Confidence 4777776665 47899999999999998876 7999999987742211100001 123799999999999999999999
Q ss_pred CC-ce--EEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCC-----------Ce
Q psy16863 827 DF-GQ--SITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAG-----------DI 892 (1075)
Q Consensus 827 ~~-G~--~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~-----------~~ 892 (1075)
.. |. ....+.|.|..+ ..+|.+.......+.+|+.++|.|.+.|. .|.|+|+|||..+... ..
T Consensus 80 ~~~g~~~~s~~~~l~V~~~--~~~p~i~~~~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 156 (198)
T 1ugn_A 80 DTAGRSESSDPLELVVTGA--YIKPTLSAQPSPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSR 156 (198)
T ss_dssp TTTEECCCCCCEEEEEECS--SCCCEEEEESCSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCE
T ss_pred CCCCcccCCccEEEEEccc--ccCCccccCCccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcce
Confidence 98 63 234566666652 23455544433457899999999999988 7899999999877421 23
Q ss_pred eEEEECCCCceeeEEEEEEEEeCCe
Q psy16863 893 HKIISGEDGTCCLGIYTCEAHNCMG 917 (1075)
Q Consensus 893 ~~i~~~~~~~~d~G~Y~C~a~N~~G 917 (1075)
..|.+......|+|.|+|.|.|..+
T Consensus 157 ~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 157 AIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp EEEEECCCCTTSCEEEEEEEECTTS
T ss_pred eEEEecccCcccCeEEEEEEEeCCC
Confidence 6777888888999999999999876
No 154
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.83 E-value=1.9e-20 Score=190.59 Aligned_cols=173 Identities=17% Similarity=0.201 Sum_probs=131.0
Q ss_pred eccceeeeecCCeEEEEEE-EecCCC-CeEEEEECCEEeec--CCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCC
Q psy16863 753 EGLKSCQATVNEEFKFTVQ-VSISPE-PKVSWFRDDQQVVE--SDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDF 828 (1075)
Q Consensus 753 ~~~~~~~~~~g~~~~l~C~-v~g~p~-p~v~W~k~g~~i~~--~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~ 828 (1075)
..+....+.+|+.+.|.|. +.+.|. +.++|+|++..+.. ..+.... .. ...|.|.+++.+|+|.|+|.|.|..
T Consensus 13 ~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~-~~--~~~L~i~~v~~~d~G~Y~C~~~~~~ 89 (201)
T 3s97_C 13 EERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVS-QT--NGNLYIANVEASDKGNYSCFVSSPS 89 (201)
T ss_dssp SCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEEC-TT--TCCEEESSCCGGGCEEEEEEEEEGG
T ss_pred CCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEE-cC--CCeEEECcCCcccCeEEEEEEEecC
Confidence 3456788999999999999 888998 99999999988752 2222222 12 2369999999999999999999987
Q ss_pred ceEEE---EEEEEEEecC--CCCCCeeeeec-ceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCC-----eeEEEE
Q psy16863 829 GQSIT---SCFLKLNVPK--HYKKPKFLEEL-KAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGD-----IHKIIS 897 (1075)
Q Consensus 829 G~~~~---s~~l~V~~~~--~~~~p~~~~~~-~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~-----~~~i~~ 897 (1075)
+.... ...+.+.... ...+|.+.... ...+.+|+.++|.|.+.|.|.|.|+|+|+|..+..+. ...|.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i 169 (201)
T 3s97_C 90 ITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKI 169 (201)
T ss_dssp GTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEE
T ss_pred CCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEE
Confidence 76554 2233332211 11234444333 2347789999999999999999999999999887532 235677
Q ss_pred CCCCceeeEEEEEEEEeCCeeEEEEEEEEEe
Q psy16863 898 GEDGTCCLGIYTCEAHNCMGTTSSSAALLGF 928 (1075)
Q Consensus 898 ~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 928 (1075)
......|+|.|+|.|.|..|..+.++.|.|.
T Consensus 170 ~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 170 FNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 7788889999999999999999999988874
No 155
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.83 E-value=2e-20 Score=192.07 Aligned_cols=169 Identities=16% Similarity=0.122 Sum_probs=122.3
Q ss_pred cceeeeecC--CeEEEEEEEecCCCCeEEEEEC---CEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCc
Q psy16863 755 LKSCQATVN--EEFKFTVQVSISPEPKVSWFRD---DQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFG 829 (1075)
Q Consensus 755 ~~~~~~~~g--~~~~l~C~v~g~p~p~v~W~k~---g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G 829 (1075)
+..+.+.+| +++.|.|.+.+ |.+.++|+|+ |..+..+.++... ..+ .|.|.+++.+|+|.|+|.|.|..+
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~--~~~--~l~I~~v~~~D~G~Y~C~a~n~~~ 88 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWD--SKK--GFTIPSYMISYAGMVFCEAKINDE 88 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEE--TTT--EEEEEGGGTTTCSEEEEEEC----
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCccccc--CCc--cEEEccCChhcCceEEEEEEECCe
Confidence 467789999 99999999986 8899999884 7777665544432 222 599999999999999999999644
Q ss_pred eEEEE-EEEEEEecCCCCCCee-eeecce-eecCCCeEEEEEEEEccCC--CeeEEEECCEEcCCC--------------
Q psy16863 830 QSITS-CFLKLNVPKHYKKPKF-LEELKA-VLSEGGAVNLECKVIGVPQ--PTLKWFKDGRELKAG-------------- 890 (1075)
Q Consensus 830 ~~~~s-~~l~V~~~~~~~~p~~-~~~~~~-~~~~g~~~~L~C~v~g~p~--p~v~W~k~g~~l~~~-------------- 890 (1075)
...+. +.|.|.. ..+|.+ ...... .+.+|+.++|.|.+.|.|. +.|+|+|+|..+...
T Consensus 89 ~~~s~~~~l~v~~---~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~ 165 (213)
T 2x1w_L 89 SYQSIMYIVVVVG---YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSE 165 (213)
T ss_dssp CEECCCEEEEECB---CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCS
T ss_pred eEEEEEEEEEEeC---CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCcc
Confidence 43322 4555532 122333 233333 5789999999999998664 479999998764321
Q ss_pred ---CeeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEecCC
Q psy16863 891 ---DIHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFEDK 931 (1075)
Q Consensus 891 ---~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 931 (1075)
....|.+......|+|.|+|.|.|..|..++++.|.|.++|
T Consensus 166 ~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 166 MKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp CEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC--
T ss_pred ceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccc
Confidence 02247777888899999999999999999999999998654
No 156
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.83 E-value=1.9e-19 Score=182.34 Aligned_cols=164 Identities=13% Similarity=0.171 Sum_probs=120.2
Q ss_pred eeecCCeEEEEEEEecCCCCeEEEEECC-EEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEE
Q psy16863 759 QATVNEEFKFTVQVSISPEPKVSWFRDD-QQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFL 837 (1075)
Q Consensus 759 ~~~~g~~~~l~C~v~g~p~p~v~W~k~g-~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l 837 (1075)
.+.+|+++.|.|.+.|.|.|.|+|+|+. .++. .+. . .......|.|.+++.+|+|.|+|.|.|..|.....+.|
T Consensus 12 ~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~~~--~-~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l 86 (202)
T 1vca_A 12 LAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--GKV--T-NEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQV 86 (202)
T ss_dssp EEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--SEE--E-EETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred EEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--ceE--E-EcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEE
Confidence 3559999999999999999999999943 2221 111 1 12234579999999999999999999999988888889
Q ss_pred EEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCC---CeeEEEECCEEcCCC-----------C--eeEEEECCCC
Q psy16863 838 KLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQ---PTLKWFKDGRELKAG-----------D--IHKIISGEDG 901 (1075)
Q Consensus 838 ~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~---p~v~W~k~g~~l~~~-----------~--~~~i~~~~~~ 901 (1075)
.|..+|.. +.+... ..+.+|+.++|.|.+.|.|+ ++|+|+|||.+|... . ...+.+....
T Consensus 87 ~V~~~p~~--~~~~~~--~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~ 162 (202)
T 1vca_A 87 EIYSFPKD--PEIHLS--GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVI 162 (202)
T ss_dssp EEEBCCSC--CEEEES--SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCG
T ss_pred EEEeCCCC--CEeCCc--eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeee
Confidence 99876532 332222 34779999999999998754 379999999987421 1 1223345555
Q ss_pred ceeeEEEEEEEEeCCee-------EEEEEEEEEecCC
Q psy16863 902 TCCLGIYTCEAHNCMGT-------TSSSAALLGFEDK 931 (1075)
Q Consensus 902 ~~d~G~Y~C~a~N~~G~-------~~~~~~l~v~~~~ 931 (1075)
..|.|.|+|+|.|.+|. .+++..|.|.-+|
T Consensus 163 ~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P 199 (202)
T 1vca_A 163 EDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISP 199 (202)
T ss_dssp GGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC
T ss_pred ccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCC
Confidence 56789999999999986 3556667666443
No 157
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.83 E-value=1.7e-19 Score=180.37 Aligned_cols=158 Identities=16% Similarity=0.315 Sum_probs=129.0
Q ss_pred eeecCCeEEEEEEEecCCCC--eEEEEECCEEcCCCC------eEEEeecCCCceEEEEEEecCceEEEEEEEEEEeccc
Q psy16863 661 VMTDDGLVSFECKVVGFPTP--TLQWFKDNEELKPGD------VYQLTGTSSLGSYCCVAKNVMGKAESSTQLTIEDIRN 732 (1075)
Q Consensus 661 ~~~~g~~~~l~C~v~g~p~p--~v~W~k~g~~l~~~~------~~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~ 732 (1075)
.+.+|+.+.|.|.+.+.|.| .+.|+|+|..+..+. .+.+...+|+|.|+|.|.|... ..+.|.|.
T Consensus 9 ~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~~~~~l~i~~~~d~G~Y~C~~~n~~~---~~~~l~V~---- 81 (184)
T 3b5h_A 9 VEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPM---GTANIQLH---- 81 (184)
T ss_dssp EEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCCSEEEEEECGGGCCEEEEEEEESTTS---CEEEEEEC----
T ss_pred EEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccCCcEEEEEechhhCeEEEEEEECCcC---cEEEEEEe----
Confidence 46689999999999988777 899999999987653 4555556899999999998332 45667775
Q ss_pred cCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCC-CCeEEEEE---CCE-Eeec--CCcEEEEEeeCcEE
Q psy16863 733 HLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISP-EPKVSWFR---DDQ-QVVE--SDNVKILKETLGVC 805 (1075)
Q Consensus 733 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p-~p~v~W~k---~g~-~i~~--~~~~~~~~~~~~~~ 805 (1075)
.+|.+...+....+..|+.+.|.|.+.|.| .|.++|+| ++. .+.. ..++.+... .+..
T Consensus 82 --------------~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 146 (184)
T 3b5h_A 82 --------------GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSS-QGRS 146 (184)
T ss_dssp --------------CSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEE-TTEE
T ss_pred --------------cCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEec-CCee
Confidence 578888777777899999999999999999 79999999 444 4432 256776643 4567
Q ss_pred EEEEcccc-CCCCeEEEEEEEeCCceEEEEEEEEEE
Q psy16863 806 HLKIHALE-VADQAEWKCIATNDFGQSITSCFLKLN 840 (1075)
Q Consensus 806 ~L~I~~~~-~~D~G~Y~C~A~N~~G~~~~s~~l~V~ 840 (1075)
.|.|.+++ .+|+|.|+|.|.|.+|....++.|.|.
T Consensus 147 ~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 147 ELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp EEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEeeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 89999999 999999999999999999888888775
No 158
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.83 E-value=2.6e-20 Score=192.09 Aligned_cols=177 Identities=27% Similarity=0.471 Sum_probs=138.4
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCC--cEEEE-EcCCE-EEEEEcccCCCCceeEEEE
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENK--IYRTQ-HDGNF-YFIDLSSVSLFDSGRWTCL 423 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~--~~~~~-~~g~~-~~L~I~~v~~~d~G~Y~C~ 423 (1075)
.+|.|...+.+..+.+|+++.|.|.+.+.|.+.|.|+|+|..+.... ...+. .++.. ..|.|.+++.+|+|.|+|.
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~ 87 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCV 87 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEE
Confidence 68999999999999999999999999999999999999999987642 11222 23332 2347889999999999999
Q ss_pred EEeCCCce-eeEEEEEeecCCCCCCCeeeee-cceEEecCCeEEEEEEE-ECCCCCeEEEEeCCEeccC--------CCE
Q psy16863 424 AENAVGRS-HCSCELSVLVPKAYKAPFFTKE-LEAILTEQGTVSLECKV-MGIPTPQLIWYKDNKKIKA--------GDI 492 (1075)
Q Consensus 424 a~n~~g~~-~~s~~l~V~~~~~~~~p~~~~~-~~~~~~~g~~v~l~C~~-~g~p~~~v~W~~~g~~l~~--------~~~ 492 (1075)
|.|..|.. .....|.|.+.+. .+... ....+.+|+.+.|.|.+ .|.|.+.++|+|+|..+.. ..+
T Consensus 88 ~~n~~g~~~~~~~~l~v~~~~~----~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~ 163 (217)
T 2vr9_A 88 AKNRVGQAVSRHASLQIAVLRD----DFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSR 163 (217)
T ss_dssp EEETTEEEECCCEEEEECEECC----SCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCS
T ss_pred EecCCCccccccceEEEEEeCC----CcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCc
Confidence 99998866 3356666665321 22222 23347899999999998 8899999999999999872 222
Q ss_pred ------EEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEe
Q psy16863 493 ------FALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIAR 528 (1075)
Q Consensus 493 ------~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~ 528 (1075)
..|.|..+..+|+|.|+|.|.|..|...++..+.+.
T Consensus 164 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 164 VRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp EEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEE
Confidence 168999999999999999999999998877666554
No 159
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.83 E-value=5.2e-20 Score=186.85 Aligned_cols=165 Identities=12% Similarity=0.162 Sum_probs=131.0
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcE-EEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIK-IHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~-v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
..|.+...+....+.+|++++|.|.+.+.|.+. |.|+|+|..+.... ..|.|.+++.+|+|.|+|.|.|
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n 75 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQL 75 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEETT
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeCC
Confidence 456677777778999999999999998887664 99999999887543 3589999999999999999987
Q ss_pred CCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECC-CCCeEEEEeCCEeccCC-CEEEEEeCCCCCCC
Q psy16863 427 AVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGI-PTPQLIWYKDNKKIKAG-DIFALTANPKDPSS 504 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~-p~~~v~W~~~g~~l~~~-~~~~l~i~~~~~~d 504 (1075)
. ..+..+.|.|..++ .+...+...+.+|+.+.|.|.+.+. |.+.|+|+|||..+... ....|.|..+..+|
T Consensus 76 ~--~~s~~~~l~V~~~p-----~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~L~i~~v~~~D 148 (204)
T 3sgj_C 76 S--TLSDPVQLEVHIGW-----LLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKD 148 (204)
T ss_dssp S--BCCCCEEEEEECSS-----EEEECSCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGG
T ss_pred C--cccccEEEEEecCc-----eEecCCceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecccCCceEEECcCCccc
Confidence 4 44446677776543 3444444568899999999999765 55799999999988532 23478999999999
Q ss_pred cEEEEEEEEe-cceeeEEEEEEEEec
Q psy16863 505 LGTYTCEAVN-CMGAAFSTSRVIARG 529 (1075)
Q Consensus 505 ~G~Y~C~a~n-~~g~~~~~~~v~v~~ 529 (1075)
+|.|+|.|.| ..+..+....|.|.+
T Consensus 149 ~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (204)
T 3sgj_C 149 SGSYFCRGLVGSKNVSSETVQITITQ 174 (204)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CEEEEEEEEeCCCceecCcEEEEEeC
Confidence 9999999999 555566667787774
No 160
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.83 E-value=7.4e-20 Score=188.05 Aligned_cols=170 Identities=14% Similarity=0.170 Sum_probs=124.1
Q ss_pred EEeccceeeeecCCeEEEEEEEecCCCCeEEEEEC--CEEee------------cCCcEEEEEeeCcEEEEEEccccCCC
Q psy16863 751 FIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRD--DQQVV------------ESDNVKILKETLGVCHLKIHALEVAD 816 (1075)
Q Consensus 751 ~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~--g~~i~------------~~~~~~~~~~~~~~~~L~I~~~~~~D 816 (1075)
+...+ ...+.+|+++.|.|.+.+.|.+.+.|+|. +.... ...++.+.. ..+...|.|.+++.+|
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D 81 (213)
T 3mj8_L 4 LTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSN-SGNMATLTISKAQAGD 81 (213)
T ss_dssp BBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEESSCCGGG
T ss_pred EEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEe-cCCEEEEEECCCChhh
Confidence 34444 66789999999999999999999999992 22111 234666654 4567899999999999
Q ss_pred CeEEEEEEEeCCc---eEEEEEEEEEEecCCCCCCeeeeec-ceeecCCCeEEEEEEEEccC-C-CeeEEEECCEEcCCC
Q psy16863 817 QAEWKCIATNDFG---QSITSCFLKLNVPKHYKKPKFLEEL-KAVLSEGGAVNLECKVIGVP-Q-PTLKWFKDGRELKAG 890 (1075)
Q Consensus 817 ~G~Y~C~A~N~~G---~~~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~~~L~C~v~g~p-~-p~v~W~k~g~~l~~~ 890 (1075)
+|.|+|.|.|..| .......|.|...+. .+|.+.... ...+.+|+.++|.|.+.|.+ + +.|+|+|||.+|..+
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~-~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 160 (213)
T 3mj8_L 82 EADYYCQSWDGTNSAWVFGSGTKVTVLGQPN-AAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQG 160 (213)
T ss_dssp CEEEEEEEEETTTTEEEEBCCEEEEEECSCC-BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred CEEEEEEeccCCcceeEEcCceEEEEeCCCC-CCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCC
Confidence 9999999999988 334456777774322 345554333 22344899999999999863 3 489999999999753
Q ss_pred ----------Cee----EEEECCCCceeeEEEEEEEEeCCeeEEEEE
Q psy16863 891 ----------DIH----KIISGEDGTCCLGIYTCEAHNCMGTTSSSA 923 (1075)
Q Consensus 891 ----------~~~----~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~ 923 (1075)
..+ .|.+......|+|.|+|.|.|..|....++
T Consensus 161 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 161 VKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp EEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred cccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 112 244455555689999999999998876654
No 161
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.83 E-value=4.9e-20 Score=186.34 Aligned_cols=165 Identities=13% Similarity=0.118 Sum_probs=116.3
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.+|.|...+. ..+.+|++++|.|.+.+.|. .+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.|.|.
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 4 SKATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYSP 80 (196)
T ss_dssp CBCEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCChhHCeEEEEEEeCC
Confidence 4677776665 48899999999999988765 9999999987753211 0112344567999999999999999999998
Q ss_pred CCcee--eEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccC-----------CCEEE
Q psy16863 428 VGRSH--CSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKA-----------GDIFA 494 (1075)
Q Consensus 428 ~g~~~--~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~-----------~~~~~ 494 (1075)
.|... ..+.|.|... ..+|.+...+...+.+|+.++|.|.+.+.| +.+.|+|+|..+.. .....
T Consensus 81 ~g~~~~s~~~~l~V~~~--~~~p~i~~~~~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~ 157 (196)
T 2d3v_A 81 AGWSEPSDPLELVVTGF--YNKPTLSALPSPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQAL 157 (196)
T ss_dssp TEECBCCCCEEEEEECS--SCCCEEEC-----------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEE
T ss_pred CCcCCcCccEEEEecCC--CCCCeEEccCCccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeE
Confidence 77543 3456666553 234565554444588999999999999988 89999999988732 12368
Q ss_pred EEeCCCCCCCcEEEEEEEEeccee
Q psy16863 495 LTANPKDPSSLGTYTCEAVNCMGA 518 (1075)
Q Consensus 495 l~i~~~~~~d~G~Y~C~a~n~~g~ 518 (1075)
|.|.++..+|+|.|+|.|.|..+.
T Consensus 158 L~I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 158 FPVGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp EECCCCBTTBCEEEEEEEEETTEE
T ss_pred EEeeecCcccCeeEEEEEEccCCC
Confidence 999999999999999999997653
No 162
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.83 E-value=5.1e-20 Score=186.29 Aligned_cols=164 Identities=15% Similarity=0.210 Sum_probs=126.7
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.+|.+...+.. .+.+|++++|.|.+.+ +.+.+.|+|+|..+..... .....+....|.|.+++.+|+|.|+|.|.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQ-NPLEPKNKARFSIPSMTEDYAGRYRCYYRSP 80 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEE-CCCSSSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccccc-ccccCCceEEEEeccCCcccCceEEEEEeCC
Confidence 46777766666 8999999999999987 6789999999987754211 1112245567999999999999999999999
Q ss_pred CCce--eeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCC----------CEEEE
Q psy16863 428 VGRS--HCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAG----------DIFAL 495 (1075)
Q Consensus 428 ~g~~--~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~----------~~~~l 495 (1075)
.|.. +....|.|... ..+|.+...+...+.+|+.++|.|.+.+ +++.+.|+|+|..+... ....|
T Consensus 81 ~g~~~~s~~~~l~V~~~--~~~p~~~~~~~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L 157 (196)
T 3p2t_A 81 VGWSQPSDPLELVMTGA--YSKPTLSALPSPLVTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEF 157 (196)
T ss_dssp TEEBCCCCCEEEEEECS--SCCCEEEEESCSEECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEE
T ss_pred CcccCCCccEEEEecCC--CCCCEEEeCCcceecCCCeEEEEEecCC-CCCEEEEEeCCCcccceeecccccccCcceEE
Confidence 8843 34455555533 3455666655556889999999999987 45689999999876432 23469
Q ss_pred EeCCCCCCCcEEEEEEEEecce
Q psy16863 496 TANPKDPSSLGTYTCEAVNCMG 517 (1075)
Q Consensus 496 ~i~~~~~~d~G~Y~C~a~n~~g 517 (1075)
.|..+..+|+|.|+|.|.|..+
T Consensus 158 ~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 158 PMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EECSCCGGGCEEEEEEEECGGG
T ss_pred EeCCCcccCCCeEEEEEEcCCC
Confidence 9999999999999999999876
No 163
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.83 E-value=9.1e-21 Score=189.38 Aligned_cols=155 Identities=15% Similarity=0.125 Sum_probs=116.2
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+.. .+.+|++++|.|.+.+ |.+.+.|+|+|... ... ...|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~---------~~~--~~~L~i~~v~~~D~G~Y~C~a~n 73 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR---------YQD--QAVLFIPAMKRSLAGRYRCSYQN 73 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC---------EES--SSEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc---------cCc--ccEEEECcCChhhCceEEEEEEc
Confidence 57777766654 7899999999999987 88899999998751 111 23799999999999999999999
Q ss_pred CCceEEE--EEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCC-----eeEEEECC
Q psy16863 827 DFGQSIT--SCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGD-----IHKIISGE 899 (1075)
Q Consensus 827 ~~G~~~~--s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~-----~~~i~~~~ 899 (1075)
..|.... .+.|.|.. ...+|.+.......+.+|+.++|.|.+.+. ++.++|+|||..+.... ...|.+..
T Consensus 74 ~~g~~~~s~~~~l~V~~--~~~~p~i~~~p~~~v~~G~~v~l~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~L~i~~ 150 (184)
T 2gi7_A 74 GSLWSLPSDQLELVATG--VFAKPSLSAQPGPAVSSGGDVTLQCQTRYG-FDQFALYKEGDPAPYKNPERWYRASFPIIT 150 (184)
T ss_dssp TTEEBCCCCCEEEEEES--SSCCCEEEEECCCSSCCTTCEEEEEECSSC-CCEEEEEECCCCTTSCCCCEEEEESSSEEE
T ss_pred CCCccCCCCCEEEEecC--cCCCCEEEeCCCceecCCCcEEEEEEcCCC-CcEEEEEECCCcCcceecCCCceEEEEEcc
Confidence 8875333 34555543 334566655444457799999999998665 47999999999876422 22233444
Q ss_pred CCceeeEEEEEEEEeCCe
Q psy16863 900 DGTCCLGIYTCEAHNCMG 917 (1075)
Q Consensus 900 ~~~~d~G~Y~C~a~N~~G 917 (1075)
....|+|.|+|.|.|..+
T Consensus 151 v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 151 VTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp ETTCCSEEEEEEEECTTS
T ss_pred CCccCCeEEEEEEEeCCC
Confidence 566789999999999865
No 164
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.82 E-value=5.1e-20 Score=189.19 Aligned_cols=178 Identities=23% Similarity=0.401 Sum_probs=139.8
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCC-----cEEEEEcCCEEE--EEEcccCCCCceeE
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENK-----IYRTQHDGNFYF--IDLSSVSLFDSGRW 420 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~-----~~~~~~~g~~~~--L~I~~v~~~d~G~Y 420 (1075)
.||.|...+.+..+.+|+++.|.|.+.+.|.+.+.|+|+|..+.... ......++.... |.|.+++.+|+|.|
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 87 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEE
Confidence 47888888889999999999999999999999999999999886432 222334444432 44567899999999
Q ss_pred EEEEEeCCCce-eeEEEEEeecCCCCCCCeeee-ecceEEecCCeEEEEEEE-ECCCCCeEEEEeCCEeccCCCE-----
Q psy16863 421 TCLAENAVGRS-HCSCELSVLVPKAYKAPFFTK-ELEAILTEQGTVSLECKV-MGIPTPQLIWYKDNKKIKAGDI----- 492 (1075)
Q Consensus 421 ~C~a~n~~g~~-~~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~v~l~C~~-~g~p~~~v~W~~~g~~l~~~~~----- 492 (1075)
+|.|.|..|.. ..+..|.|...+. .+.. +....+.+|+.+.|.|.+ .|.|.+.++|+++|..+.....
T Consensus 88 ~C~~~n~~g~~~~~~~~l~V~~~~~----~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~ 163 (212)
T 2v9r_A 88 VCVARNYLGEAVSHDASLEVAILRD----DFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIR 163 (212)
T ss_dssp EEEEEETTEEEECCCEEEEECEECS----SCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEE
T ss_pred EEEEECCCCceeecceEEEEEeccc----cceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEcc
Confidence 99999998865 4466777765432 2222 223347899999999998 8899999999999999875432
Q ss_pred -EEEEeCCCCCCCcEEEEEEEEecceeeEEE-EEEEEec
Q psy16863 493 -FALTANPKDPSSLGTYTCEAVNCMGAAFST-SRVIARG 529 (1075)
Q Consensus 493 -~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~v~v~~ 529 (1075)
..|.|..+..+|+|.|+|.|.|..|...+. +.|.|..
T Consensus 164 ~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~ 202 (212)
T 2v9r_A 164 GGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLE 202 (212)
T ss_dssp TTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEe
Confidence 268899999999999999999999987664 7888874
No 165
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.82 E-value=1.4e-19 Score=187.80 Aligned_cols=169 Identities=17% Similarity=0.254 Sum_probs=113.6
Q ss_pred ceeeeecCCeEEEEEEEecCCCC---eEEEEECCEE-----------eec------CCcEEEEEe--eCcEEEEEEcccc
Q psy16863 756 KSCQATVNEEFKFTVQVSISPEP---KVSWFRDDQQ-----------VVE------SDNVKILKE--TLGVCHLKIHALE 813 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g~p~p---~v~W~k~g~~-----------i~~------~~~~~~~~~--~~~~~~L~I~~~~ 813 (1075)
..+.+.+|++++|.|.+.+.|.+ .|+|+|++.. +.. ..++..... ..+...|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 44678999999999999987655 7999997632 111 112222211 2346789999999
Q ss_pred CCCCeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEcc-CCCeeEEEECCE-EcCCCC
Q psy16863 814 VADQAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGV-PQPTLKWFKDGR-ELKAGD 891 (1075)
Q Consensus 814 ~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~-p~p~v~W~k~g~-~l~~~~ 891 (1075)
.+|+|.|+|.|.|..|.......+ ..++....+. ....+.+|+.+.|.|.+.|. |.|+|+|+|++. .+....
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~--~~~~~~~~~~----~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~ 165 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVEL--KVAALGSDLH----VDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVE 165 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEE--EEEBCCCCCE----EEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEE
T ss_pred hHHCeeEEEEEECCCcEEEEEEEE--eeccceeccc----ceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCc
Confidence 999999999999998887655444 4433222222 12235689999999999984 999999999654 333211
Q ss_pred ---------eeE-EEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEecC
Q psy16863 892 ---------IHK-IISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFED 930 (1075)
Q Consensus 892 ---------~~~-i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~ 930 (1075)
.+. +.+......|+|.|+|.|+|.+|..+.++.|.|.++
T Consensus 166 ~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 166 APVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp CCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred eEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 111 111122346899999999999999999998887543
No 166
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.82 E-value=8.9e-20 Score=187.34 Aligned_cols=171 Identities=23% Similarity=0.320 Sum_probs=132.3
Q ss_pred CeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEec------------CCCCcEEEEEcCCEEEEEEcccCCCCc
Q psy16863 350 PAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKL------------EENKIYRTQHDGNFYFIDLSSVSLFDS 417 (1075)
Q Consensus 350 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l------------~~~~~~~~~~~g~~~~L~I~~v~~~d~ 417 (1075)
+.|...+.+..+.+|+++.|.|.+.+.|.+.|.|+|++..+ ....++.+.. ..|.|.+++.+|+
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~v~~~D~ 77 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS----SGITFSSVTRKDN 77 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET----TEEEESCCCGGGC
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec----eeEEEcccCcccC
Confidence 45566677889999999999999999899999999988653 1234443332 4689999999999
Q ss_pred eeEEEEEEeCCC--ceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEE-EECCCCCeEEEEeCCE-eccCCC--
Q psy16863 418 GRWTCLAENAVG--RSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECK-VMGIPTPQLIWYKDNK-KIKAGD-- 491 (1075)
Q Consensus 418 G~Y~C~a~n~~g--~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~-~~g~p~~~v~W~~~g~-~l~~~~-- 491 (1075)
|.|+|.|.|..| ....++.|.|..+|.. +.. .....+.+|+.+.|.|. +.+.|.+.+.|++++. .+....
T Consensus 78 G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~--~~~--~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~ 153 (212)
T 1f97_A 78 GEYTCMVSEEGGQNYGEVSIHLTVLVPPSK--PTI--SVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKK 153 (212)
T ss_dssp EEEEEEEEETTSSSEEEEEEEEEEEBCCCC--CEE--ECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----
T ss_pred eEEEEEEEccCCCcccEEEEEEEEEcCCCC--ccc--CCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccc
Confidence 999999999977 4456677777766542 122 22235789999999999 7899999999999999 776422
Q ss_pred --------------EEEEEeCCCCCCCcEEEEEEEEecceee--EEEEEEEEe
Q psy16863 492 --------------IFALTANPKDPSSLGTYTCEAVNCMGAA--FSTSRVIAR 528 (1075)
Q Consensus 492 --------------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~v~v~ 528 (1075)
...|.|..+..+|+|.|+|.|.|..|.. .....|.|.
T Consensus 154 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 154 TRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred cccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 2368899999999999999999999988 444555554
No 167
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.82 E-value=2e-19 Score=186.20 Aligned_cols=171 Identities=16% Similarity=0.265 Sum_probs=123.5
Q ss_pred ceeeeecCCeEEEEEEEecCCC-----CeEEEEECCEEeec---------------CCcEEEEEe--eCcEEEEEEcccc
Q psy16863 756 KSCQATVNEEFKFTVQVSISPE-----PKVSWFRDDQQVVE---------------SDNVKILKE--TLGVCHLKIHALE 813 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g~p~-----p~v~W~k~g~~i~~---------------~~~~~~~~~--~~~~~~L~I~~~~ 813 (1075)
..+.+..|+++.|.|.+.+.|. +.+.|+|++..+.. ..+..+... ..+...|.|.+++
T Consensus 9 ~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 88 (222)
T 3sbw_C 9 DLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVK 88 (222)
T ss_dssp SEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCC
T ss_pred ccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcc
Confidence 4456889999999999988774 48999998754421 133333221 2245789999999
Q ss_pred CCCCeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEEC-CEEcCCCCe
Q psy16863 814 VADQAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKD-GRELKAGDI 892 (1075)
Q Consensus 814 ~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~-g~~l~~~~~ 892 (1075)
.+|+|.|+|.|.| .|.....+.|.|..++.. |... ....+.+|+.++|.|.+.|.|.|.|+|+|+ |..+.....
T Consensus 89 ~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~--~~~~--~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~ 163 (222)
T 3sbw_C 89 LQDAGVYRCMISY-GGADYKRITVKVNAPYNK--INQR--ILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTT 163 (222)
T ss_dssp GGGCEEEEEEEES-SSEEEEEEEEEEEBCCCC--CEEE--EEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEE
T ss_pred cccCeEEEEEEEe-CCCceeEEEEEEECCCCC--CCce--eeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccc
Confidence 9999999999999 677777888888866432 2211 112466899999999999999999999999 666543221
Q ss_pred eEEEE-----------CCCCceeeEEEEEEEEeCCeeEEEEEEEEEecCC
Q psy16863 893 HKIIS-----------GEDGTCCLGIYTCEAHNCMGTTSSSAALLGFEDK 931 (1075)
Q Consensus 893 ~~i~~-----------~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 931 (1075)
..+.. ......|.|.|+|.|.|.+|....++.|.|.++|
T Consensus 164 ~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p 213 (222)
T 3sbw_C 164 TTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELP 213 (222)
T ss_dssp EEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC-
T ss_pred eEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCc
Confidence 11100 0112356899999999999999999999886544
No 168
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.82 E-value=1.7e-20 Score=187.73 Aligned_cols=161 Identities=12% Similarity=0.116 Sum_probs=124.2
Q ss_pred eeeecCCeEEEEEEEecCCCCeEEEEECCEE--eec------------CCcEEEEEe--eCcEEEEEEccccCCCCeEEE
Q psy16863 758 CQATVNEEFKFTVQVSISPEPKVSWFRDDQQ--VVE------------SDNVKILKE--TLGVCHLKIHALEVADQAEWK 821 (1075)
Q Consensus 758 ~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~--i~~------------~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~ 821 (1075)
+.+.+|+++.|.|.+.+.|.+.+.|+|++.. +.. ..++.+... ..+...|.|.+++.+|+|.|+
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 84 (184)
T 2ny1_B 5 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI 84 (184)
T ss_dssp EEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEE
Confidence 4688999999999999999999999999863 221 112222111 223456999999999999999
Q ss_pred EEEEeCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCeeEEEECCCC
Q psy16863 822 CIATNDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDIHKIISGEDG 901 (1075)
Q Consensus 822 C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~~~i~~~~~~ 901 (1075)
|.|.|..| .+.|.|.... ......+.+|+.++|.|.+.+.|.|.++|+|+|..+.. ....|.+....
T Consensus 85 C~~~~~~~----~~~l~V~~~~--------~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~-~~~~L~i~~v~ 151 (184)
T 2ny1_B 85 CEVEDQKE----EVQLLVFGLT--------ANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ-GGKTLSVSQLE 151 (184)
T ss_dssp EEETTEEE----EEEEEEEEEE--------ESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEE-ESSEEEESSCC
T ss_pred EEEEcCCC----cEEEEEEEec--------CCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcccc-CceEEEEecCC
Confidence 99998755 3455555321 11122467899999999999999999999999876643 34567778888
Q ss_pred ceeeEEEEEEEEeCCeeEEEEEEEEEecCC
Q psy16863 902 TCCLGIYTCEAHNCMGTTSSSAALLGFEDK 931 (1075)
Q Consensus 902 ~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 931 (1075)
..|+|.|+|.|.|..|..+.++.|.|...|
T Consensus 152 ~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p 181 (184)
T 2ny1_B 152 LQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ 181 (184)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred cCCCeEEEEEEEECCceEEEEEEEEEEecC
Confidence 899999999999999999999999987654
No 169
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=2.1e-19 Score=179.78 Aligned_cols=155 Identities=16% Similarity=0.255 Sum_probs=121.0
Q ss_pred eeeecCCeEEEEEEEecCCCC--eEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEE
Q psy16863 758 CQATVNEEFKFTVQVSISPEP--KVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSC 835 (1075)
Q Consensus 758 ~~~~~g~~~~l~C~v~g~p~p--~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~ 835 (1075)
..+.+|+++.|.|.+.+.|.| .+.|+|+|..+..+.... ....|.|. +.+|+|.|+|.|.|... .++
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~------~~~~l~i~--~~~d~G~Y~C~~~n~~~---~~~ 76 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPG------QKTEFKVD--SDDQWGEYSCVFLPEPM---GTA 76 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCC------SEEEEEEC--GGGCCEEEEEEEESTTS---CEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccC------CcEEEEEe--chhhCeEEEEEEECCcC---cEE
Confidence 457899999999999998877 999999999997665321 24467777 69999999999999433 466
Q ss_pred EEEEEecCCCCCCeeeeecc-eeecCCCeEEEEEEEEccC-CCeeEEEE---CC-EEcCCC-----------CeeEEEEC
Q psy16863 836 FLKLNVPKHYKKPKFLEELK-AVLSEGGAVNLECKVIGVP-QPTLKWFK---DG-RELKAG-----------DIHKIISG 898 (1075)
Q Consensus 836 ~l~V~~~~~~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~p-~p~v~W~k---~g-~~l~~~-----------~~~~i~~~ 898 (1075)
.|.|..+|.+ ..... ..+.+|+.++|.|.+.|.| .|.|+|+| +| ..+..+ ....|.+.
T Consensus 77 ~l~V~~~P~~-----~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 151 (184)
T 3b5h_A 77 NIQLHGPPRV-----KAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIE 151 (184)
T ss_dssp EEEECCSCCC-----EESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEEC
T ss_pred EEEEecCCce-----eecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEe
Confidence 7888765533 22222 2477899999999999999 79999999 44 444332 12367777
Q ss_pred CCC-ceeeEEEEEEEEeCCeeEEEEEEEEEe
Q psy16863 899 EDG-TCCLGIYTCEAHNCMGTTSSSAALLGF 928 (1075)
Q Consensus 899 ~~~-~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 928 (1075)
... ..|+|.|+|.|.|.+|...+++.|.|.
T Consensus 152 ~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 152 NLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp SCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 787 789999999999999999999888875
No 170
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.82 E-value=1.2e-19 Score=178.78 Aligned_cols=162 Identities=14% Similarity=0.180 Sum_probs=124.3
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCC-CCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISP-EPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p-~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
+|.+...+....+.+|+++.|.|.+.+.| .+.++|+|+|..+..... .+.|.+++.+|+|.|+|.|.|
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~-----------~~~~~~~~~~d~G~Y~C~~~~ 72 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ-----------PSYRFKANNNDSGEYTCQTGQ 72 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS-----------SEEEEECCGGGCEEEEEEETT
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc-----------ceEEEecccccCeEEEEEEeC
Confidence 55666666667799999999999999987 679999999999875421 366779999999999999998
Q ss_pred CCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEE-ccCCCeeEEEECCEEcCC-CCeeEEEECCCCcee
Q psy16863 827 DFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVI-GVPQPTLKWFKDGRELKA-GDIHKIISGEDGTCC 904 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~-g~p~p~v~W~k~g~~l~~-~~~~~i~~~~~~~~d 904 (1075)
..+.. .+.|.|..++ .........+.+|+.++|.|.+. +.|.+.++|+|||..+.. .....|.+......|
T Consensus 73 ~~~s~--~~~l~v~~~~-----~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d 145 (170)
T 3ry4_A 73 TSLSD--PVHLTVLFEW-----LVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHSH 145 (170)
T ss_dssp SBCCC--CEEEEEECCS-----EEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEESSCCEEEESSCCGGG
T ss_pred CCceE--eEEEEEECCc-----eEecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccccCCCCeEEEEeccccC
Confidence 65543 5666776532 33333344577899999999995 456689999999998753 234567778888899
Q ss_pred eEEEEEEEEeCCeeE-EEEEEEEE
Q psy16863 905 LGIYTCEAHNCMGTT-SSSAALLG 927 (1075)
Q Consensus 905 ~G~Y~C~a~N~~G~~-~~~~~l~v 927 (1075)
+|.|+|.|.|..|.. +..+.|.|
T Consensus 146 ~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 146 SGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEE
T ss_pred CEEEEEEEEeCcCccccccEEEEE
Confidence 999999999999973 33444443
No 171
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=5.1e-20 Score=184.62 Aligned_cols=163 Identities=13% Similarity=0.104 Sum_probs=120.6
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+.. .+.+|++++|.|.+.+ +.+.+.|+|+|..+....... ........|.|.+++.+|+|.|+|.|.|
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 78 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKP--PERINKVKFYIPDMNSRMAGQYSCIYRV 78 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSS--CTTCCEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCccccccccc--CCCcceeEEEeCcCCcccCeEEEEEecC
Confidence 46777766665 7899999999999985 457999999998875311100 0112345899999999999999999999
Q ss_pred CCceEE--EEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcC-----CCCeeEEEECC
Q psy16863 827 DFGQSI--TSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELK-----AGDIHKIISGE 899 (1075)
Q Consensus 827 ~~G~~~--~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~-----~~~~~~i~~~~ 899 (1075)
..|... ..+.|.|.. .+.+|.+.......+.+|+.++|.|.+.+ +.+.+.|+|||..+. ......|.+..
T Consensus 79 ~~~~~~~s~~~~l~V~~--~~~~p~i~~~p~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~ 155 (188)
T 1oll_A 79 GELWSEPSNLLDLVVTE--MYDTPTLSVHPGPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQRGYGKVQAEFPLGP 155 (188)
T ss_dssp TTEECCCCCCEEEEEES--CSCCCEEEEESCSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEEEEEECSSEEEEEEEE
T ss_pred CCCCCCCCCceEEEecc--cCCCCeEEECCCCccccCCEEEEEEEcCC-CCCEEEEEECCccccccccCCCceeEEEECC
Confidence 876443 345555543 23456665544456789999999999865 567999999997664 34456677777
Q ss_pred CCceeeEEEEEEEEeCC
Q psy16863 900 DGTCCLGIYTCEAHNCM 916 (1075)
Q Consensus 900 ~~~~d~G~Y~C~a~N~~ 916 (1075)
....|+|.|+|.|.|..
T Consensus 156 v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 156 VTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp CCGGGCEEEEEECEEET
T ss_pred CCcCCCcEEEEEEEcCC
Confidence 88899999999999964
No 172
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.82 E-value=5.8e-21 Score=195.73 Aligned_cols=169 Identities=21% Similarity=0.329 Sum_probs=130.5
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEee------------cCCcEEEEEeeCcEEEEEEccccC
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVV------------ESDNVKILKETLGVCHLKIHALEV 814 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~------------~~~~~~~~~~~~~~~~L~I~~~~~ 814 (1075)
.++.|...+....+.+|+++.|.|.+.+.|.+.++|+|++..+. ...++.+.. ..|.|.+++.
T Consensus 3 ~~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~L~i~~~~~ 77 (209)
T 1nbq_A 3 GSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP-----TGITFKSVTR 77 (209)
T ss_dssp CCCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET-----TEEECSCCCT
T ss_pred ceEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec-----cEEEEeeCCH
Confidence 35667777778889999999999999999999999999886531 123444321 4799999999
Q ss_pred CCCeEEEEEEEeCCce--EEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEE-EccCCCeeEEEECCEEcCCCC
Q psy16863 815 ADQAEWKCIATNDFGQ--SITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKV-IGVPQPTLKWFKDGRELKAGD 891 (1075)
Q Consensus 815 ~D~G~Y~C~A~N~~G~--~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v-~g~p~p~v~W~k~g~~l~~~~ 891 (1075)
+|+|.|+|.|.|..|. ....+.|.|..+|.+.. ... ...+.+|+.++|.|.+ .|.|.|.|+|+|+|..+..+.
T Consensus 78 ~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~--~~~--~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~ 153 (209)
T 1nbq_A 78 EDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPT--VNI--PSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNP 153 (209)
T ss_dssp TSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCC--CCC--BSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCS
T ss_pred HHCcEEEEEEecCCCCccceEEEEEEEecCCcCCC--ccc--ccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCcc
Confidence 9999999999999763 34466777776654322 111 2236789999999997 899999999999999887532
Q ss_pred ----------------eeEEEECCCCceeeEEEEEEEEeCCeeEEEEEE
Q psy16863 892 ----------------IHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAA 924 (1075)
Q Consensus 892 ----------------~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~ 924 (1075)
...|.+......|+|.|+|.|.|..|....++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~ 202 (209)
T 1nbq_A 154 KSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNA 202 (209)
T ss_dssp SSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCC
T ss_pred ccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCccccccc
Confidence 235677777888999999999999999844443
No 173
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.82 E-value=2e-19 Score=178.06 Aligned_cols=165 Identities=12% Similarity=0.152 Sum_probs=128.6
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcE-EEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEE
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIK-IHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~-v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
..+|.+...+....+.+|++++|.|.+.+.|.+. +.|+|+|..+... ...|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~----------~~~L~i~~~~~~d~G~Y~C~~~ 74 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ----------ASSYFIDAATVNDSGEYRCQTN 74 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESS----------CSEEEESSCCGGGCEEEEEECS
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCC----------ceEEEEeCCCcccCEEEEEEee
Confidence 3577777777778999999999999998887665 8999999887532 1258999999999999999999
Q ss_pred eCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCC-eEEEEeCCEeccCC-CEEEEEeCCCCCC
Q psy16863 426 NAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTP-QLIWYKDNKKIKAG-DIFALTANPKDPS 503 (1075)
Q Consensus 426 n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~v~W~~~g~~l~~~-~~~~l~i~~~~~~ 503 (1075)
|..+ .....|.|..++ .........+.+|+.+.|.|.+.+.|++ .|.|+|+|..+... ....|.|..+..+
T Consensus 75 n~~~--s~~~~l~V~~~~-----~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~~~~~~L~i~~v~~~ 147 (175)
T 1fnl_A 75 LSTL--SDPVQLEVHIGW-----LLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLK 147 (175)
T ss_dssp SSCC--CCCEEEEEECSS-----EEEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEEEECCCEEESSCCGG
T ss_pred CCcc--cccEEEEEeCCC-----ceeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCCCCCCEEEEcccChh
Confidence 8655 345666666322 3333344557899999999999987665 99999999998533 2347899999999
Q ss_pred CcEEEEEEEEeccee-eEEEEEEEEe
Q psy16863 504 SLGTYTCEAVNCMGA-AFSTSRVIAR 528 (1075)
Q Consensus 504 d~G~Y~C~a~n~~g~-~~~~~~v~v~ 528 (1075)
|+|.|+|.|.|..|. ......|.|.
T Consensus 148 d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 148 DSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred hCeEEEEEEEcCCCCccCccEEEEEe
Confidence 999999999997654 4445566665
No 174
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.81 E-value=2e-20 Score=187.00 Aligned_cols=145 Identities=18% Similarity=0.282 Sum_probs=107.8
Q ss_pred eecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEcc-ccCCCCeEEEEEEEeCCceEEEEEEEE
Q psy16863 760 ATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHA-LEVADQAEWKCIATNDFGQSITSCFLK 838 (1075)
Q Consensus 760 ~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~-~~~~D~G~Y~C~A~N~~G~~~~s~~l~ 838 (1075)
...|+++.|.|.+.+ |. .|+|+|||.+|..+. ++ .|.|.+ ++.+|+|.|+|.|.|..|....+..+.
T Consensus 11 ~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~--------~~--~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 11 SISGTSVELTCPLDS-DE-NLKWEKNGQELPQKH--------DK--HLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp EEETTEEEEECSSCC-CT-TCEEEETTEEECSCC--------CS--EEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred EeCCcEEEEEEeCCC-CC-ceEEEECCEECCCCC--------CC--EEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 468999999999987 54 499999999987642 12 699999 999999999999999999865555554
Q ss_pred EEecCCCC-------------CCe-----eeeecc---eeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCC--CeeEE
Q psy16863 839 LNVPKHYK-------------KPK-----FLEELK---AVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAG--DIHKI 895 (1075)
Q Consensus 839 V~~~~~~~-------------~p~-----~~~~~~---~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~--~~~~i 895 (1075)
|....... +|. +..... ..+.+|++++|.|.+ |.|.|+|+|||.+|... ....|
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~~~~~L 155 (186)
T 1jbj_A 79 VGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNATKNTW 155 (186)
T ss_dssp CCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSCCSSCC
T ss_pred EecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCCCcceE
Confidence 43211100 000 000000 124489999999998 88999999999999733 33445
Q ss_pred EECCCCceeeEEEEEEEEeCCeeE
Q psy16863 896 ISGEDGTCCLGIYTCEAHNCMGTT 919 (1075)
Q Consensus 896 ~~~~~~~~d~G~Y~C~a~N~~G~~ 919 (1075)
.+......|+|.|+|.|.|..|+.
T Consensus 156 ~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 156 NLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp EEEETTSCCEEEEEEEESSCEEEE
T ss_pred EECCCCcCcCEEEEEEEEcCcCCc
Confidence 556677889999999999999986
No 175
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.81 E-value=9.2e-20 Score=179.88 Aligned_cols=156 Identities=22% Similarity=0.319 Sum_probs=117.6
Q ss_pred ceeeeecCCeEEEEEEEe--cCCCCeEEEEE--CCEEe----------ecCCcEEEEEeeCcEEEEEEccccCCCCeEEE
Q psy16863 756 KSCQATVNEEFKFTVQVS--ISPEPKVSWFR--DDQQV----------VESDNVKILKETLGVCHLKIHALEVADQAEWK 821 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~--g~p~p~v~W~k--~g~~i----------~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 821 (1075)
..+....|+++.|.|... +.|.+.|.|+| ++..| ..+.++.+. .++ .|.|.+++.+|+|.|+
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~--~ng--sL~I~~v~~~DsG~Y~ 82 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLF--KNG--TLKIKHLKTDDQDIYK 82 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEEC--TTS--CEEECSCCGGGCEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEEC--CCC--CEEECCCChhhCEEEE
Confidence 446688999999999543 24577999999 99887 345666664 334 7999999999999999
Q ss_pred EEEEeCCceEEE--EEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCeeEEEECC
Q psy16863 822 CIATNDFGQSIT--SCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDIHKIISGE 899 (1075)
Q Consensus 822 C~A~N~~G~~~~--s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~~~i~~~~ 899 (1075)
|.|.|..|.... .+.|.|..+ ..+|.+.. .+..++|.|.+.+.|.|.|+|+|||..| .+....|.+..
T Consensus 83 c~~~n~~g~~~~~~~~~L~V~~~--~~~P~i~~-------~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~~~~~i~~~~ 152 (182)
T 1hnf_A 83 VSIYDTKGKNVLEKIFDLKIQER--VSKPKISW-------TCINTTLTCEVMNGTDPELNLYQDGKHL-KLSQRVITHKW 152 (182)
T ss_dssp EEEEETTSCEEEEEEEEEEEECC--CCCCEEEE-------ETTTTEEEEECSSCSSCEEEEEESSCEE-EEESSCEEEEC
T ss_pred EEEEeCCCceeEEEEEEEEEcCc--CCCCEEEE-------ccCcEEEEeEccCCCCCEEEEEECCEEC-CCCCcEEEEec
Confidence 999999998654 455666543 34455432 2336899999999999999999999988 33333343322
Q ss_pred CCceeeEEEEEEEEeCCeeEEEEEEEE
Q psy16863 900 DGTCCLGIYTCEAHNCMGTTSSSAALL 926 (1075)
Q Consensus 900 ~~~~d~G~Y~C~a~N~~G~~~~~~~l~ 926 (1075)
...|+|.|+|.|.|.+|..++.+.+.
T Consensus 153 -~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 153 -TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp -CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred -ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 35789999999999999998877663
No 176
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.81 E-value=9.9e-20 Score=186.71 Aligned_cols=164 Identities=15% Similarity=0.138 Sum_probs=122.8
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEE--EEEEcccCCCCceeEEEEEE
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFY--FIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~--~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
.+|.|...+. ..+.+|++++|.|.+.+ +.+.|.|+|+|..+....+. ....+... .|.|.+++.+|+|.|+|.|.
T Consensus 8 ~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 84 (218)
T 1uct_A 8 PMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGR-RLKFWNETDPEFVIDHMDANKAGRYQCQYR 84 (218)
T ss_dssp CCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSE-ECC----CCCEEEECSCCGGGCEEEEEEEE
T ss_pred CCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccc-cCCCCcceeeEEEEcccccccCEEEEEEEE
Confidence 4677766555 57899999999999976 57899999999766432211 11112223 68999999999999999999
Q ss_pred eCCCceeeE--EEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccC-----CCEEEEEeC
Q psy16863 426 NAVGRSHCS--CELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKA-----GDIFALTAN 498 (1075)
Q Consensus 426 n~~g~~~~s--~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~-----~~~~~l~i~ 498 (1075)
|..|....+ ..|.|.. .+.+|.+...+...+.+|+.++|.|...+.|.+.+.|+|+|..+.. .....|.|.
T Consensus 85 n~~~~~~~s~~~~l~V~~--~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~ 162 (218)
T 1uct_A 85 IGHYRFRYSDTLELVVTG--LYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLG 162 (218)
T ss_dssp ETTTEEEECCCEEEEEEC--SSCCCEEEESSCSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEEEECC
T ss_pred cCCCceeecCCEEEEEcC--cccCCEEEeCCCCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCEEEEc
Confidence 987754433 4555543 2345666555555688999999999777778889999999988753 235689999
Q ss_pred CCCCCCcEEEEEEEEecc
Q psy16863 499 PKDPSSLGTYTCEAVNCM 516 (1075)
Q Consensus 499 ~~~~~d~G~Y~C~a~n~~ 516 (1075)
.+..+|+|.|+|.|.|..
T Consensus 163 ~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 163 PVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp SCCGGGCEEEEEEEECTT
T ss_pred cCCcccCEEEEEEEEcCC
Confidence 999999999999999863
No 177
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.81 E-value=4.7e-19 Score=178.21 Aligned_cols=160 Identities=13% Similarity=0.230 Sum_probs=117.5
Q ss_pred cceeeeecCCeEEEEEEEec-CCCCeEEEEECCEEee---cC---------------CcEEEEEeeCcEEEEEEccccCC
Q psy16863 755 LKSCQATVNEEFKFTVQVSI-SPEPKVSWFRDDQQVV---ES---------------DNVKILKETLGVCHLKIHALEVA 815 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g-~p~p~v~W~k~g~~i~---~~---------------~~~~~~~~~~~~~~L~I~~~~~~ 815 (1075)
+..+.+.+|+++.|.|.+.+ .+.+.|.|+|+|..+. .+ .|+.+. . ...|+|.+++.+
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~--~--~~sL~I~~v~~~ 80 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT--Q--SYSLQLSNLKME 80 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC--T--TCCEEECSCCGG
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC--C--CeEEEECCCCcc
Confidence 34567889999999999986 4557999999987653 11 133332 1 247999999999
Q ss_pred CCeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCC-eEEEEEEEEcc-CCCeeEEEECCEEcCCCCee
Q psy16863 816 DQAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGG-AVNLECKVIGV-PQPTLKWFKDGRELKAGDIH 893 (1075)
Q Consensus 816 D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~-~~~L~C~v~g~-p~p~v~W~k~g~~l~~~~~~ 893 (1075)
|+|.|+|.|.|..|.....+.|.|..++ ..|.+.... .....|. .++|.|.+.|. |.|.|+|+|+|..+..+...
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~L~V~~~~--~~p~i~~~~-~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~~~l 157 (193)
T 2if7_A 81 DTGSYRAQISTKTSAKLSSYTLRILRQL--RNIQVTNHS-QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNL 157 (193)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEECCC--EEEEEEECC-C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESSSEE
T ss_pred cCceEEEEEEecCCCeEEEEEEEEEccC--CCCeEecCc-eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCCCeE
Confidence 9999999999999987777788886543 224443322 1223455 89999999995 47999999999998877666
Q ss_pred EEEECCCCceeeEEEEEEEEeCCeeEEEE
Q psy16863 894 KIISGEDGTCCLGIYTCEAHNCMGTTSSS 922 (1075)
Q Consensus 894 ~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~ 922 (1075)
.|... ....|+|.|+|.|.|.+|..+..
T Consensus 158 ~i~~~-~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 158 TVSWD-PRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp EEEEC-TTTCSCCEEEEEEEETTEEEEEE
T ss_pred EEEec-cCcCCCCcEEEEEECCCCccccc
Confidence 55432 22247999999999999998654
No 178
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.81 E-value=3.9e-19 Score=180.89 Aligned_cols=169 Identities=14% Similarity=0.170 Sum_probs=129.3
Q ss_pred ecCceeeccCCeEEEEEEEecCCC-----cEEEEEE-CCEecCCCCcEEEEEcC---CEEEEEEcccCCCCceeEEEEEE
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSPTE-----IKIHWYR-NDRKLEENKIYRTQHDG---NFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~p~-----~~v~W~k-~g~~l~~~~~~~~~~~g---~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
++..+.+.+|+++.|.|.+.+.|. +.|.|+| ++.......++.+..++ ....|.|.+++.+|+|.|+|.|.
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 445678899999999999988876 8999999 55555445565554432 44679999999999999999999
Q ss_pred eCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccC-------CCEEEEEeC
Q psy16863 426 NAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKA-------GDIFALTAN 498 (1075)
Q Consensus 426 n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~-------~~~~~l~i~ 498 (1075)
|..|.....+.|.|..++ ..|.+.. ..+.+|+.+.|.|.+.|.|.|.++|++++..+.. +....+.+.
T Consensus 88 ~~~~~~~~~~~l~V~~~~--~~p~~~~---~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~ 162 (202)
T 3bp6_B 88 CGAAWDYKYLTVKVKASY--MRIDTRI---LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVL 162 (202)
T ss_dssp ETTEEEEEEEEEEEEBCC--CCEEEEE---EECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEE
T ss_pred eCCCcceEEEEEEecCCC--CcccEEE---EecCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEEEEEE
Confidence 998877777888887654 2233221 1246799999999999999999999999876532 223455666
Q ss_pred CCCCCCcEEEEEEEEecceeeEEEEEEEEe
Q psy16863 499 PKDPSSLGTYTCEAVNCMGAAFSTSRVIAR 528 (1075)
Q Consensus 499 ~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~ 528 (1075)
.+...|+|.|+|.|.|..|....++.|.|.
T Consensus 163 ~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~ 192 (202)
T 3bp6_B 163 RLKPQPSRNFSCMFWNAHMKELTSAIIDPL 192 (202)
T ss_dssp EECCCTTCCEEEEEEETTTTEEEEEEECC-
T ss_pred EEEcCCCCEEEEEEEcCCcccccEEEEEec
Confidence 777889999999999999999888887765
No 179
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.81 E-value=4e-19 Score=181.78 Aligned_cols=164 Identities=15% Similarity=0.206 Sum_probs=123.5
Q ss_pred eeeeecCCeEEEEEEEecCCCCeEEEEECCEEeec-------------------CCcEEEEEeeCcEEEEEEccccCCCC
Q psy16863 757 SCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVE-------------------SDNVKILKETLGVCHLKIHALEVADQ 817 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~-------------------~~~~~~~~~~~~~~~L~I~~~~~~D~ 817 (1075)
...+.+|+++.|.|...+.|.+.+.|+|++..... ..++.+. .+ ..|.|.+++.+|+
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~--~~--~~L~i~~v~~~D~ 83 (208)
T 3r4d_A 8 PPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIY--SN--GSLLFQMITMKDM 83 (208)
T ss_dssp SSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEEC--TT--SCEEECSCCGGGC
T ss_pred cceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEe--cC--CeEEEccccccCC
Confidence 35688999999999988889999999998643221 1122221 12 2699999999999
Q ss_pred eEEEEEEEeCC-ceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCe----
Q psy16863 818 AEWKCIATNDF-GQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDI---- 892 (1075)
Q Consensus 818 G~Y~C~A~N~~-G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~---- 892 (1075)
|.|+|.|.|.. +.......|.|..++ ..|.+...... +.+|+.++|.|.+.+.| |.|+|+|+|..+..+.+
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~--~~p~i~~~~~~-~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~ 159 (208)
T 3r4d_A 84 GVYTLDMTDENYRRTQATVRFHVHQPV--TQPFLQVTNTT-VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLS 159 (208)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEECCC--CCCEEEESCSS-CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEE
T ss_pred eEEEEEEEcccCceeEEEEEEEeccCC--CCCEEecCCce-EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEc
Confidence 99999999985 555566777776543 34555444333 77899999999998866 89999999999986543
Q ss_pred ---eEEEECCCCceeeEEEEEEEEeCCeeEEE-EEEEEEe
Q psy16863 893 ---HKIISGEDGTCCLGIYTCEAHNCMGTTSS-SAALLGF 928 (1075)
Q Consensus 893 ---~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~-~~~l~v~ 928 (1075)
..|.+......|+|.|+|.|.|.+|+..+ .++|.|.
T Consensus 160 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 160 QNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp TTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred CCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence 34666677788999999999999998775 3444444
No 180
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.81 E-value=2.9e-19 Score=181.69 Aligned_cols=175 Identities=18% Similarity=0.233 Sum_probs=132.8
Q ss_pred eeeecCceeeccCCeEEEEEE-EecCCC-cEEEEEECCEecCC--CCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 352 FIRRLHDIAVKVGTRARLLVE-IRSPTE-IKIHWYRNDRKLEE--NKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 352 ~~~~~~~~~v~~G~~v~l~C~-~~g~p~-~~v~W~k~g~~l~~--~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
....+..+.+.+|+.+.|.|. +.+.|. +.++|+|++..+.. ..+......+ ..|.|.+++.+|+|.|+|.+.|.
T Consensus 11 ~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~~~~~ 88 (201)
T 3s97_C 11 PPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTN--GNLYIANVEASDKGNYSCFVSSP 88 (201)
T ss_dssp CSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTT--CCEEESSCCGGGCEEEEEEEEEG
T ss_pred CcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCC--CeEEECcCCcccCeEEEEEEEec
Confidence 344557789999999999999 788887 99999999987742 2333232222 24899999999999999999997
Q ss_pred CCceee---EEEEEeecCC--CCCCCeeeeec-ceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCCE-----EEEE
Q psy16863 428 VGRSHC---SCELSVLVPK--AYKAPFFTKEL-EAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGDI-----FALT 496 (1075)
Q Consensus 428 ~g~~~~---s~~l~V~~~~--~~~~p~~~~~~-~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~~-----~~l~ 496 (1075)
.+.... ...+.+.... ...+|.+.... ...+.+|+.+.|.|.+.|.|.+.+.|++++..+..... ..|.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~ 168 (201)
T 3s97_C 89 SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLK 168 (201)
T ss_dssp GGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEE
T ss_pred CCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEE
Confidence 665543 2233332211 11233344333 33478999999999999999999999999998875433 3789
Q ss_pred eCCCCCCCcEEEEEEEEecceeeEEEEEEEEe
Q psy16863 497 ANPKDPSSLGTYTCEAVNCMGAAFSTSRVIAR 528 (1075)
Q Consensus 497 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~ 528 (1075)
|..+..+|+|.|+|.|.|..|....++.|.|+
T Consensus 169 i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 169 IFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 99999999999999999999999998888875
No 181
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.80 E-value=3.9e-19 Score=183.40 Aligned_cols=171 Identities=13% Similarity=0.166 Sum_probs=118.0
Q ss_pred eEEeccceeeeecCCeEEEEEEEecC-CCCeEEEEECC---EE------------ee---cCCcEEEEEeeCcEEEEEEc
Q psy16863 750 KFIEGLKSCQATVNEEFKFTVQVSIS-PEPKVSWFRDD---QQ------------VV---ESDNVKILKETLGVCHLKIH 810 (1075)
Q Consensus 750 ~~~~~~~~~~~~~g~~~~l~C~v~g~-p~p~v~W~k~g---~~------------i~---~~~~~~~~~~~~~~~~L~I~ 810 (1075)
.+...+ ...+.+|+++.|.|.+.+. |.+.+.|||.. .+ .. ...++.+.. ..+...|.|.
T Consensus 3 ~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~ 80 (218)
T 3s96_B 3 VLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS-SGADRYLSIS 80 (218)
T ss_dssp SEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEE-ETTEEEEEES
T ss_pred eEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEec-CCceEEEEEc
Confidence 344445 6779999999999999999 89999999931 11 11 113666654 4567889999
Q ss_pred cccCCCCeEEEEEEEeCCc-----eEEEEEEEEEEecCCCCCCeeee-ecceeecCCCeEEEEEEEEc-cCCC-eeEEEE
Q psy16863 811 ALEVADQAEWKCIATNDFG-----QSITSCFLKLNVPKHYKKPKFLE-ELKAVLSEGGAVNLECKVIG-VPQP-TLKWFK 882 (1075)
Q Consensus 811 ~~~~~D~G~Y~C~A~N~~G-----~~~~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~~~L~C~v~g-~p~p-~v~W~k 882 (1075)
+++.+|+|.|+|.|.|..| .......|.|...+. .+|.+.. ........|+.++|.|.+.| .|.| .|+|+|
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~-~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k 159 (218)
T 3s96_B 81 NIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPK-STPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKA 159 (218)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCC-BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred cCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCC-CCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEE
Confidence 9999999999999999887 222345677764322 3454433 22223446789999999998 5666 899999
Q ss_pred CCEEcCCCC----------eeE----EEECCCCceeeEEEEEEEEeCCeeEEEEE
Q psy16863 883 DGRELKAGD----------IHK----IISGEDGTCCLGIYTCEAHNCMGTTSSSA 923 (1075)
Q Consensus 883 ~g~~l~~~~----------~~~----i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~ 923 (1075)
||.++..+. .+. +.+......|+|.|+|.|.|..|....++
T Consensus 160 ~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 160 NGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp TTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred CCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 999987531 111 22222233468999999999998776543
No 182
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.80 E-value=1e-19 Score=184.40 Aligned_cols=164 Identities=19% Similarity=0.251 Sum_probs=119.7
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.+|.|...+. ..+.+|++++|.|.+.+.|. .+.|+|+|..+....+. ....+....|.|.+++.+|+|.|+|.|.|.
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRI-PQELVKKGQFPIPSITWEHTGRYRCYYGSD 80 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTS-CHHHHTTTEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccc-cccCCcccEEEECCCCHHHCeEEEEEEECC
Confidence 4677776555 58999999999999988765 79999999877421110 000111235899999999999999999998
Q ss_pred C-Cc--eeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCC-----------CEE
Q psy16863 428 V-GR--SHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAG-----------DIF 493 (1075)
Q Consensus 428 ~-g~--~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~-----------~~~ 493 (1075)
. |. .+..+.|.|... ..+|.+...+...+.+|+.++|.|.+.+. .+.+.|+|+|..+... ...
T Consensus 81 ~~g~~~~s~~~~l~V~~~--~~~p~i~~~~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~ 157 (198)
T 1ugn_A 81 TAGRSESSDPLELVVTGA--YIKPTLSAQPSPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRA 157 (198)
T ss_dssp TTEECCCCCCEEEEEECS--SCCCEEEEESCSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEE
T ss_pred CCCcccCCccEEEEEccc--ccCCccccCCccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCccee
Confidence 7 53 344566666653 23456655554568899999999999987 7799999999887321 246
Q ss_pred EEEeCCCCCCCcEEEEEEEEecce
Q psy16863 494 ALTANPKDPSSLGTYTCEAVNCMG 517 (1075)
Q Consensus 494 ~l~i~~~~~~d~G~Y~C~a~n~~g 517 (1075)
.|.|..+..+|+|.|+|.|.|..+
T Consensus 158 ~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 158 IFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp EEEECCCCTTSCEEEEEEEECTTS
T ss_pred EEEecccCcccCeEEEEEEEeCCC
Confidence 899999999999999999999865
No 183
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.80 E-value=3e-19 Score=179.01 Aligned_cols=163 Identities=12% Similarity=0.134 Sum_probs=122.6
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.+|.|...+.. .+.+|++++|.|.+.+. .+.+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.+.|.
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 79 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRVG 79 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECC-SSCTTCCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCccccccc-ccCCCcceeEEEeCcCCcccCeEEEEEecCC
Confidence 36777766665 89999999999998654 579999999987642100 0011234457999999999999999999987
Q ss_pred CCce--eeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEecc-----CCCEEEEEeCCC
Q psy16863 428 VGRS--HCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIK-----AGDIFALTANPK 500 (1075)
Q Consensus 428 ~g~~--~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~-----~~~~~~l~i~~~ 500 (1075)
.|.. +..+.|.|... +.+|.+...+...+.+|+.++|.|.+.+ +.+.+.|+|+|..+. ......|.|..+
T Consensus 80 ~~~~~~s~~~~l~V~~~--~~~p~i~~~p~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~v 156 (188)
T 1oll_A 80 ELWSEPSNLLDLVVTEM--YDTPTLSVHPGPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPV 156 (188)
T ss_dssp TEECCCCCCEEEEEESC--SCCCEEEEESCSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEEEEEECSSEEEEEEEEC
T ss_pred CCCCCCCCceEEEeccc--CCCCeEEECCCCccccCCEEEEEEEcCC-CCCEEEEEECCccccccccCCCceeEEEECCC
Confidence 6543 33455655532 3356666555556889999999999876 557999999998764 345668999999
Q ss_pred CCCCcEEEEEEEEecc
Q psy16863 501 DPSSLGTYTCEAVNCM 516 (1075)
Q Consensus 501 ~~~d~G~Y~C~a~n~~ 516 (1075)
..+|+|.|+|.|.|..
T Consensus 157 ~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 157 TTAHRGTYRCFGSYNN 172 (188)
T ss_dssp CGGGCEEEEEECEEET
T ss_pred CcCCCcEEEEEEEcCC
Confidence 9999999999999864
No 184
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.80 E-value=3.9e-19 Score=176.17 Aligned_cols=165 Identities=16% Similarity=0.211 Sum_probs=127.8
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCc-EEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEI-KIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~-~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
.+|.+...+....+.+|++++|.|.+.+.+.+ .++|+|+|..+.... ..|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~~----------~~L~i~~v~~~d~G~Y~C~~~~ 72 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETN----------SSLNIVNAKFEDSGEYKCQHQQ 72 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCCS----------SEEEECSCCGGGCEEEEEECTT
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCCc----------eEEEEeccceecCEEEEEEcCC
Confidence 47778878888899999999999999887764 699999999886432 2589999999999999999988
Q ss_pred CCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEE-CCCCCeEEEEeCCEeccCC-CEEEEEeCCCCCCC
Q psy16863 427 AVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVM-GIPTPQLIWYKDNKKIKAG-DIFALTANPKDPSS 504 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~v~W~~~g~~l~~~-~~~~l~i~~~~~~d 504 (1075)
..+. ....|.|..+ +.........+.+|+.+.|.|.+. +.|.+.+.|+|+|..+... ....|.|..+..+|
T Consensus 73 ~~~s--~~~~l~V~~~-----~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d 145 (176)
T 1f2q_A 73 VNES--EPVYLEVFSD-----WLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVED 145 (176)
T ss_dssp SSCC--CCEEEEEECS-----SEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCCCSSEEEESSCCGGG
T ss_pred cccc--ccEEEEEeCc-----ceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeecCCCeEEECCCCccc
Confidence 6554 3456666632 234444445688999999999995 5667799999999998543 34589999999999
Q ss_pred cEEEEEEEEeccee-eEEEEEEEEec
Q psy16863 505 LGTYTCEAVNCMGA-AFSTSRVIARG 529 (1075)
Q Consensus 505 ~G~Y~C~a~n~~g~-~~~~~~v~v~~ 529 (1075)
+|.|+|.|.|..+. ....+.|.|.+
T Consensus 146 ~G~Y~C~a~n~~~~~~s~~~~l~V~~ 171 (176)
T 1f2q_A 146 SGTYYCTGKVWQLDYESEPLNITVIK 171 (176)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CEEEEEEEEeCCcceEecCEEEEEec
Confidence 99999999996443 44456777763
No 185
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.80 E-value=1.1e-19 Score=179.39 Aligned_cols=156 Identities=15% Similarity=0.239 Sum_probs=119.6
Q ss_pred ceeeccCCeEEEEEEEec--CCCcEEEEEECCEecC----------CCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEE
Q psy16863 358 DIAVKVGTRARLLVEIRS--PTEIKIHWYRNDRKLE----------ENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 358 ~~~v~~G~~v~l~C~~~g--~p~~~v~W~k~g~~l~----------~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
.+.+.+|++++|.|...+ .+.+.|.|+|++..+. ...++.+..+|. |.|.+++.+|+|.|+|.|.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gs---L~I~~v~~~D~G~Y~C~~~ 81 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGD---LKIKNLTRDDSGTYNVTVY 81 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSC---EEESSCCGGGCEEEEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCc---EEEcccccccCEEEEEEEE
Confidence 356789999999995323 5567999999997552 345666644554 8999999999999999999
Q ss_pred eCCCce--eeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCCEEEEEeCCCCCC
Q psy16863 426 NAVGRS--HCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGDIFALTANPKDPS 503 (1075)
Q Consensus 426 n~~g~~--~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~~~~l~i~~~~~~ 503 (1075)
|..|.. ...+.|.|..++ ..|.+. ..+..+.|.|.+.|.|.|.|+|+|+|+.+..+.+..+. .+..+
T Consensus 82 n~~g~~~~~~~~~l~V~~~~--~~p~i~-------~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~~~i~--~~~~~ 150 (176)
T 1hng_A 82 STNGTRILNKALDLRILEMV--SKPMIY-------WECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMS--YQWTN 150 (176)
T ss_dssp ETTCCEEEEEEEEEEEECCC--CCCEEE-------EETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEE--EECSC
T ss_pred eCCCCEEEEEEEEEEEeCCC--CCCEEE-------ecCCcEEEEEEecCCCCcEEEEEECCEECCCCCcEEEE--EEEcc
Confidence 999986 555667776542 233332 23456999999999999999999999999776654443 56689
Q ss_pred CcEEEEEEEEecceeeEEEEEEEE
Q psy16863 504 SLGTYTCEAVNCMGAAFSTSRVIA 527 (1075)
Q Consensus 504 d~G~Y~C~a~n~~g~~~~~~~v~v 527 (1075)
|+|.|+|.|.|..|...+...|.+
T Consensus 151 d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 151 LRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp CSSCEEEEEEETTEEEEEEECCCC
T ss_pred CCeEEEEEEEecCCCceecccccC
Confidence 999999999999998887765543
No 186
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.80 E-value=4e-19 Score=187.78 Aligned_cols=172 Identities=15% Similarity=0.156 Sum_probs=126.0
Q ss_pred eecCceeeccCCeEEEEEEEec---CCCcEEEEEECCEecC------------------------------CCCcEEEEE
Q psy16863 354 RRLHDIAVKVGTRARLLVEIRS---PTEIKIHWYRNDRKLE------------------------------ENKIYRTQH 400 (1075)
Q Consensus 354 ~~~~~~~v~~G~~v~l~C~~~g---~p~~~v~W~k~g~~l~------------------------------~~~~~~~~~ 400 (1075)
.++..+.+.+|++++|.|.+.+ .|.+.|.|+|++.... ...++.+..
T Consensus 7 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 86 (250)
T 2fbo_J 7 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN 86 (250)
T ss_dssp CSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC
T ss_pred cCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc
Confidence 3445678999999999999987 7789999999985431 012222222
Q ss_pred cCCEEEEEEcccCCCCceeEEEEEEeCCCce-----eeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCC
Q psy16863 401 DGNFYFIDLSSVSLFDSGRWTCLAENAVGRS-----HCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPT 475 (1075)
Q Consensus 401 ~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~-----~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~ 475 (1075)
++ ...|.|.+++.+|+|.|+|.|.|..+.. ..++.|.|..++....+.+.......+.+|+.+.|.|.+.|.|.
T Consensus 87 ~~-~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~ 165 (250)
T 2fbo_J 87 LA-APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCAN 165 (250)
T ss_dssp TT-SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTT
T ss_pred CC-cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCC
Confidence 11 2359999999999999999999987753 45777888775432222322222234668999999999999999
Q ss_pred CeEEEEeCCEeccCC-------------------------C-----EEEEEeCCCCCCCcEEEEEEEEe---cceeeEEE
Q psy16863 476 PQLIWYKDNKKIKAG-------------------------D-----IFALTANPKDPSSLGTYTCEAVN---CMGAAFST 522 (1075)
Q Consensus 476 ~~v~W~~~g~~l~~~-------------------------~-----~~~l~i~~~~~~d~G~Y~C~a~n---~~g~~~~~ 522 (1075)
|.|+|+|++..+... . ...|.|..+..+|+|.|+|.|.| ..|....+
T Consensus 166 p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~ 245 (250)
T 2fbo_J 166 ANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSS 245 (250)
T ss_dssp CEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEE
T ss_pred CeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCcccee
Confidence 999999999877541 1 14799999999999999999999 55566555
Q ss_pred EEEE
Q psy16863 523 SRVI 526 (1075)
Q Consensus 523 ~~v~ 526 (1075)
..|.
T Consensus 246 ~~l~ 249 (250)
T 2fbo_J 246 TILK 249 (250)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5543
No 187
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.79 E-value=4e-19 Score=182.51 Aligned_cols=167 Identities=17% Similarity=0.252 Sum_probs=120.9
Q ss_pred EEeccceeeeecCCeEEEEEEEecCCCCeEEEEECC--EEe----------e--cCCcEEEEEeeCcEEEEEEccccCCC
Q psy16863 751 FIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDD--QQV----------V--ESDNVKILKETLGVCHLKIHALEVAD 816 (1075)
Q Consensus 751 ~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g--~~i----------~--~~~~~~~~~~~~~~~~L~I~~~~~~D 816 (1075)
+...+....+.+|+++.|.|.+.+.|.+.|+|+|++ ..+ . ...++.+.. ..+...|.|.+++.+|
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D 82 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSG-SGTDFTLSINSVETED 82 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEEEESSCCGGG
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEc-CCCEEEEEECCCChhh
Confidence 344456677999999999999999999999999853 221 1 124666654 4457799999999999
Q ss_pred CeEEEEEEEeCCceEEE-EEEEEEEecCCCCCCeeeee-cceeecCCCeEEEEEEEEc-cCCC-eeEEEECCEEcCCCC-
Q psy16863 817 QAEWKCIATNDFGQSIT-SCFLKLNVPKHYKKPKFLEE-LKAVLSEGGAVNLECKVIG-VPQP-TLKWFKDGRELKAGD- 891 (1075)
Q Consensus 817 ~G~Y~C~A~N~~G~~~~-s~~l~V~~~~~~~~p~~~~~-~~~~~~~g~~~~L~C~v~g-~p~p-~v~W~k~g~~l~~~~- 891 (1075)
+|.|+|.|.|..|.... ...|.|..+. .+|.+... ......+|+.++|.|.+.| .|.+ .|+|+|||.++..+.
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~--~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~ 160 (213)
T 3d9a_L 83 FGMYFCQQSNSWPYTFGGGTKLEIKRAD--AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVL 160 (213)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEECCCC--BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEE
T ss_pred CEEEEEeeecCCcceeCCCEEEEEecCC--CCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceee
Confidence 99999999999876433 3466665422 24554432 2222347889999999998 5655 899999999987651
Q ss_pred -----------e----eEEEECCCCceeeEEEEEEEEeCCeeEE
Q psy16863 892 -----------I----HKIISGEDGTCCLGIYTCEAHNCMGTTS 920 (1075)
Q Consensus 892 -----------~----~~i~~~~~~~~d~G~Y~C~a~N~~G~~~ 920 (1075)
. ..|.+......|+|.|+|.|.|......
T Consensus 161 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 204 (213)
T 3d9a_L 161 NSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP 204 (213)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSC
T ss_pred ecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCc
Confidence 1 1455555556789999999999887643
No 188
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.79 E-value=5.2e-19 Score=179.76 Aligned_cols=160 Identities=14% Similarity=0.302 Sum_probs=113.7
Q ss_pred eeeeecCCeEEEEEEEe----cCCCCeEEEEECCEEeec------------CCcEEEEEeeCcEEEEEEccccCCCCeEE
Q psy16863 757 SCQATVNEEFKFTVQVS----ISPEPKVSWFRDDQQVVE------------SDNVKILKETLGVCHLKIHALEVADQAEW 820 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v~----g~p~p~v~W~k~g~~i~~------------~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 820 (1075)
.+.+..|+++.|.|.+. +.|.+.+.|+|++..+.. ..+..+ ...+...|.|.+++.+|+|.|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~--~~~~~~~L~I~~v~~~D~G~Y 80 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIF--DITNNLSIVILALRPSDEGTY 80 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEE--ESTTTTEEEECSCCGGGCEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEE--ccCCCcEEEEecccchhCeEE
Confidence 45688999999999996 347789999999988731 123322 112334799999999999999
Q ss_pred EEEEEeCCceEE-----EEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEE-ccCCCeeEEEECCEEcCCCCeeE
Q psy16863 821 KCIATNDFGQSI-----TSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVI-GVPQPTLKWFKDGRELKAGDIHK 894 (1075)
Q Consensus 821 ~C~A~N~~G~~~-----~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~-g~p~p~v~W~k~g~~l~~~~~~~ 894 (1075)
+|.|.|..|... ..+.|.|..+ ...|.+... ....|+.++|.|.+. |.|.|.|+|+|||.++......
T Consensus 81 ~C~~~~~~g~~~~~~~~~~~~l~V~~~--~~~p~~~~~---~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~- 154 (201)
T 1dr9_A 81 ECVVLKYEKDAFKREHLAEVTLSVKAD--FPTPSISDF---EIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTT- 154 (201)
T ss_dssp EEEEEECCTTSCEEEEEEEEEEEEECC--CCCCEEEEE---ECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEE-
T ss_pred EEEEEcCCCCccccccccEEEEEEcCC--CCCCceEec---cCCCCCeEEEEEecCCccCCCEEEEEECCEECccccce-
Confidence 999999887643 3455555443 334443321 124688999999995 9999999999999988743221
Q ss_pred EEECCC------------CceeeEEEEEEEEeCCeeEEEEEE
Q psy16863 895 IISGED------------GTCCLGIYTCEAHNCMGTTSSSAA 924 (1075)
Q Consensus 895 i~~~~~------------~~~d~G~Y~C~a~N~~G~~~~~~~ 924 (1075)
+..... ...|.|.|+|.|.|..|..++...
T Consensus 155 ~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 155 VSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp EEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEE
T ss_pred EEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEe
Confidence 111111 124789999999999999876554
No 189
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.79 E-value=4.3e-19 Score=184.99 Aligned_cols=168 Identities=15% Similarity=0.290 Sum_probs=122.0
Q ss_pred cceeeeecCCeEEEEEEEecCCC-CeEEEEECCEE-----ee----cCCcEE--EE----------EeeCcEEEEEEccc
Q psy16863 755 LKSCQATVNEEFKFTVQVSISPE-PKVSWFRDDQQ-----VV----ESDNVK--IL----------KETLGVCHLKIHAL 812 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g~p~-p~v~W~k~g~~-----i~----~~~~~~--~~----------~~~~~~~~L~I~~~ 812 (1075)
+.+..+.+|+++.|.|.+.+.|. +.+.|+|++.. +. ....+. +. ....+ .|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~--~L~i~~v 84 (231)
T 2pet_A 7 PPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQG--RLVLAEA 84 (231)
T ss_dssp CSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTC--CEEESSC
T ss_pred CCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCc--eEEEccc
Confidence 34567899999999999999985 89999986543 11 111111 11 12222 4999999
Q ss_pred cCCCCeEEEEEEEeCC-ceEEEEEEEEEEecCCCCCCeeeeecce-eecCCCeE-EEEEEE-EccCCCeeEEEECCEEcC
Q psy16863 813 EVADQAEWKCIATNDF-GQSITSCFLKLNVPKHYKKPKFLEELKA-VLSEGGAV-NLECKV-IGVPQPTLKWFKDGRELK 888 (1075)
Q Consensus 813 ~~~D~G~Y~C~A~N~~-G~~~~s~~l~V~~~~~~~~p~~~~~~~~-~~~~g~~~-~L~C~v-~g~p~p~v~W~k~g~~l~ 888 (1075)
+.+|+|.|+|.|.|.. |....++.|.|..++. .|.+...... .+.+|+.+ +|.|.+ .|.|.|.|+|+|||.++.
T Consensus 85 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~--~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~ 162 (231)
T 2pet_A 85 QVGDERDYVCVVRAGAAGTAEATARLNVFAKPE--ATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLE 162 (231)
T ss_dssp CGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCC--CCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECC
T ss_pred CcccCceEEEEEEecCCCceEEEEEEEEEecCC--CcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCc
Confidence 9999999999999997 8888888899987664 3555544333 25688887 999999 899999999999999997
Q ss_pred CCC----e------------------eEEEECCCCceeeEEEEEEEEe-----CCee-EEEEEEEE
Q psy16863 889 AGD----I------------------HKIISGEDGTCCLGIYTCEAHN-----CMGT-TSSSAALL 926 (1075)
Q Consensus 889 ~~~----~------------------~~i~~~~~~~~d~G~Y~C~a~N-----~~G~-~~~~~~l~ 926 (1075)
.+. + ..|.+......|+|.|+|.|.| ..|. .+..+.|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~ 228 (231)
T 2pet_A 163 VPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLT 228 (231)
T ss_dssp CCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECC
T ss_pred cccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEE
Confidence 665 1 2344443334469999999999 5666 44444443
No 190
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.79 E-value=4.7e-19 Score=182.73 Aligned_cols=170 Identities=14% Similarity=0.134 Sum_probs=121.3
Q ss_pred cceeeeecCCeEEEEEEEecCCCC---eEEEEECCEEeecCC------------------cEEEEE--eeCcEEEEEEcc
Q psy16863 755 LKSCQATVNEEFKFTVQVSISPEP---KVSWFRDDQQVVESD------------------NVKILK--ETLGVCHLKIHA 811 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g~p~p---~v~W~k~g~~i~~~~------------------~~~~~~--~~~~~~~L~I~~ 811 (1075)
+..+++..|++++|.|.+.+.|.+ .|+|+|++..+.... ++.+.. ...+.+.|.|.+
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~ 85 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRN 85 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESS
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEee
Confidence 345778999999999999998876 489999876443211 111110 011234699999
Q ss_pred ccCCCCeEEEEEEEeCCceEEEEE-EEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCC
Q psy16863 812 LEVADQAEWKCIATNDFGQSITSC-FLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAG 890 (1075)
Q Consensus 812 ~~~~D~G~Y~C~A~N~~G~~~~s~-~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~ 890 (1075)
++.+|+|.|.|.+.|..+...... .+.+..++ .+.........+..|+.+.|.|.+.|.|+|.|+|+|+|..+..+
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~ 162 (218)
T 4frw_A 86 AVQADEGEYECRVSTFPAGSFQARLRLRVLVPP---LPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSS 162 (218)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCC---CCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEE
T ss_pred ccHHHCCceeEEEEeccCceeeeEEEEEEeeec---cceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccC
Confidence 999999999999999777655433 33333322 12222222334668899999999999999999999999876532
Q ss_pred C----------eeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEE
Q psy16863 891 D----------IHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLG 927 (1075)
Q Consensus 891 ~----------~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 927 (1075)
. ...|.+......|+|.|+|.|+|.+|..+..+++.+
T Consensus 163 ~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 163 RSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp EEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred ceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 1 234667777788999999999999998877777664
No 191
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.79 E-value=4.5e-19 Score=180.00 Aligned_cols=163 Identities=10% Similarity=0.098 Sum_probs=115.9
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+. ..+.+|++++|.|.+. .|.+.+.|+|+|..+.................|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~ 84 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSV 84 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEB
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEecc-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEec
Confidence 4677766554 6688999999999998 4788999999998664321110001111245799999999999999999997
Q ss_pred CCc-----eEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCC----------C
Q psy16863 827 DFG-----QSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAG----------D 891 (1075)
Q Consensus 827 ~~G-----~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~----------~ 891 (1075)
..+ ..+..+.|.|..+ ..+|.+.......+.+|+.++|.|.+.+ |.+.|.|+|||..+..+ .
T Consensus 85 ~~~~~~~~~~s~~~~l~V~~~--~~~p~i~~~p~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~ 161 (201)
T 1nkr_A 85 THSPYQVSAPSDPLDIVIIGL--YEKPSLSAQPGPTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTF 161 (201)
T ss_dssp TTBTTCCCCCCCCEEEEEECS--SCCCEEEEESCSEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEE
T ss_pred CCCCccccCCCCCEEEEeecc--CCCCceecCCCCccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCce
Confidence 532 2233456666643 3456665444446789999999999976 67899999999876532 1
Q ss_pred eeEEEECCCCceeeEEEEEEEEeCC
Q psy16863 892 IHKIISGEDGTCCLGIYTCEAHNCM 916 (1075)
Q Consensus 892 ~~~i~~~~~~~~d~G~Y~C~a~N~~ 916 (1075)
...|.+.... |+|.|+|.|.|..
T Consensus 162 ~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 162 QADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEEEEEECC--SCEEEEEEEEETT
T ss_pred EEEEEeCCcC--CCeeEEEEEEcCC
Confidence 3345555554 9999999999864
No 192
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.79 E-value=2.8e-19 Score=198.70 Aligned_cols=192 Identities=18% Similarity=0.193 Sum_probs=151.7
Q ss_pred CCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEE
Q psy16863 319 DGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRT 398 (1075)
Q Consensus 319 d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~ 398 (1075)
+.|.|+|.+.+.... +.+ ..-.+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+..... .
T Consensus 136 ~~~~~~C~~~~~l~~----l~~----~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~--~ 205 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAH----MPN----ASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVM--K 205 (347)
T ss_dssp GGGCCCCSSSSCSSC----CCC----TTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEEC--C
T ss_pred cccCCCCCCChHHhc----CCc----ccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccc--c
Confidence 468899988772211 111 223578898888899999999999999999999999999999976543211 1
Q ss_pred EEcCCEEEEEEcccCCCCce-eEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCe
Q psy16863 399 QHDGNFYFIDLSSVSLFDSG-RWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQ 477 (1075)
Q Consensus 399 ~~~g~~~~L~I~~v~~~d~G-~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~ 477 (1075)
........|.|.+++.+|+| .|+|.|.|..|....++.|.|..+|.+ +. ....+|+.+.|.|.+.|.|.|.
T Consensus 206 ~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i----~~----~~~~~g~~v~l~C~~~g~P~p~ 277 (347)
T 2ifg_A 206 SGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASV----QL----HTAVEMHHWCIPFSVDGQPAPS 277 (347)
T ss_dssp CCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEE----EE----CCCEESSSEEEEEEEEEESCCE
T ss_pred ceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCee----ee----ccCccCceEEEEEEeeecCCCc
Confidence 12334557999999999999 999999999998887777777655431 11 1245789999999999999999
Q ss_pred EEEEeCCEeccCCC----------------EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEe
Q psy16863 478 LIWYKDNKKIKAGD----------------IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIAR 528 (1075)
Q Consensus 478 v~W~~~g~~l~~~~----------------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~ 528 (1075)
|+|+|+|..+..+. ...|.|..+..+|+|.|+|.|.|..|....++.+.|.
T Consensus 278 i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 344 (347)
T 2ifg_A 278 LRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM 344 (347)
T ss_dssp EEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSC
T ss_pred EEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEec
Confidence 99999999987543 2348999999999999999999999999888888775
No 193
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.79 E-value=1.4e-18 Score=171.21 Aligned_cols=154 Identities=16% Similarity=0.166 Sum_probs=121.9
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCC-CcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPT-EIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p-~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
.+|.+...+....+.+|+++.|.|.+.+.| .+.+.|+|+|..+..... .+.|.+++.+|+|.|+|.+.|
T Consensus 3 p~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~~~ 72 (170)
T 3ry4_A 3 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQ 72 (170)
T ss_dssp CBCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEETT
T ss_pred CCCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEEeC
Confidence 356666677777899999999999998876 679999999999876432 245678999999999999997
Q ss_pred CCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEE-CCCCCeEEEEeCCEeccC-CCEEEEEeCCCCCCC
Q psy16863 427 AVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVM-GIPTPQLIWYKDNKKIKA-GDIFALTANPKDPSS 504 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~v~W~~~g~~l~~-~~~~~l~i~~~~~~d 504 (1075)
..+ .....|.|..++ .+.......+.+|+.+.|.|.+. +.|.+.+.|+|+|..+.. .....|.|..+..+|
T Consensus 73 ~~~--s~~~~l~v~~~~-----~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d 145 (170)
T 3ry4_A 73 TSL--SDPVHLTVLFEW-----LVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHSH 145 (170)
T ss_dssp SBC--CCCEEEEEECCS-----EEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEESSCCEEEESSCCGGG
T ss_pred CCc--eEeEEEEEECCc-----eEecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccccCCCCeEEEEeccccC
Confidence 544 335667776543 33444445678999999999995 556689999999998753 234579999999999
Q ss_pred cEEEEEEEEeccee
Q psy16863 505 LGTYTCEAVNCMGA 518 (1075)
Q Consensus 505 ~G~Y~C~a~n~~g~ 518 (1075)
+|.|+|.|.|..|.
T Consensus 146 ~G~Y~C~a~n~~g~ 159 (170)
T 3ry4_A 146 SGDYHCTGNIGYTL 159 (170)
T ss_dssp CEEEEEEEEETTEE
T ss_pred CEEEEEEEEeCcCc
Confidence 99999999999986
No 194
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.79 E-value=5.8e-18 Score=171.38 Aligned_cols=162 Identities=12% Similarity=0.157 Sum_probs=121.7
Q ss_pred eeeccCCeEEEEEEEecCCCcEEEEEECC-EecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEE
Q psy16863 359 IAVKVGTRARLLVEIRSPTEIKIHWYRND-RKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCEL 437 (1075)
Q Consensus 359 ~~v~~G~~v~l~C~~~g~p~~~v~W~k~g-~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l 437 (1075)
..+.+|++++|.|.+.|.|.+.|.|+++. ..+. .+ ....+....|.|.+++.+|+|.|+|.|.|..|..+..+.|
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l 86 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--GK--VTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQV 86 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--SE--EEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--ce--EEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEE
Confidence 34559999999999999999999999943 2221 11 2234455679999999999999999999998888778888
Q ss_pred EeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCC---CeEEEEeCCEeccCC-----------C--EEEEEeCCCC
Q psy16863 438 SVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPT---PQLIWYKDNKKIKAG-----------D--IFALTANPKD 501 (1075)
Q Consensus 438 ~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~---~~v~W~~~g~~l~~~-----------~--~~~l~i~~~~ 501 (1075)
.|..+|.. +.+.. ...+.+|+.++|.|.+.|.|+ +.|+|+|++.+|... . ...|.+....
T Consensus 87 ~V~~~p~~--~~~~~--~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~ 162 (202)
T 1vca_A 87 EIYSFPKD--PEIHL--SGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVI 162 (202)
T ss_dssp EEEBCCSC--CEEEE--SSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCG
T ss_pred EEEeCCCC--CEeCC--ceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeee
Confidence 88876542 23332 245789999999999997543 379999999987421 1 2345788888
Q ss_pred CCCcEEEEEEEEeccee-------eEEEEEEEEe
Q psy16863 502 PSSLGTYTCEAVNCMGA-------AFSTSRVIAR 528 (1075)
Q Consensus 502 ~~d~G~Y~C~a~n~~g~-------~~~~~~v~v~ 528 (1075)
.+|.|.|+|.|.|..|. ...+..|.|.
T Consensus 163 ~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~ 196 (202)
T 1vca_A 163 EDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVY 196 (202)
T ss_dssp GGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEE
T ss_pred ccCCCeEEEEEEccccCCCCcceeEeeEEEEEEe
Confidence 88899999999998876 2345556554
No 195
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.79 E-value=2.2e-19 Score=179.29 Aligned_cols=155 Identities=15% Similarity=0.130 Sum_probs=118.5
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|+|... ...+ ..|.|.+++.+|+|.|+|.|.|.
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~--------~~~~--~~L~i~~v~~~D~G~Y~C~a~n~ 74 (184)
T 2gi7_A 7 PKPSLQALPS-SLVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR--------YQDQ--AVLFIPAMKRSLAGRYRCSYQNG 74 (184)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECST-TCSEEEEEETTTCC--------EESS--SEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCeEEeCCC-ccccCCCcEEEEEeCCC-CCCEEEEEECCccc--------cCcc--cEEEECcCChhhCceEEEEEEcC
Confidence 4677766655 48999999999999977 67899999998751 1122 25899999999999999999998
Q ss_pred CCcee--eEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCC-----CEEEEEeCCC
Q psy16863 428 VGRSH--CSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAG-----DIFALTANPK 500 (1075)
Q Consensus 428 ~g~~~--~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~-----~~~~l~i~~~ 500 (1075)
.|... ....|.|... ..+|.+...+...+.+|+.++|.|.+.+. ++.+.|+|+|..+... ....|.|..+
T Consensus 75 ~g~~~~s~~~~l~V~~~--~~~p~i~~~p~~~v~~G~~v~l~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~L~i~~v 151 (184)
T 2gi7_A 75 SLWSLPSDQLELVATGV--FAKPSLSAQPGPAVSSGGDVTLQCQTRYG-FDQFALYKEGDPAPYKNPERWYRASFPIITV 151 (184)
T ss_dssp TEEBCCCCCEEEEEESS--SCCCEEEEECCCSSCCTTCEEEEEECSSC-CCEEEEEECCCCTTSCCCCEEEEESSSEEEE
T ss_pred CCccCCCCCEEEEecCc--CCCCEEEeCCCceecCCCcEEEEEEcCCC-CcEEEEEECCCcCcceecCCCceEEEEEccC
Confidence 76433 3455555432 33456665555557899999999998765 4699999999987642 2345778889
Q ss_pred CCCCcEEEEEEEEecce
Q psy16863 501 DPSSLGTYTCEAVNCMG 517 (1075)
Q Consensus 501 ~~~d~G~Y~C~a~n~~g 517 (1075)
..+|+|.|+|.|.|..+
T Consensus 152 ~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 152 TAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp TTCCSEEEEEEEECTTS
T ss_pred CccCCeEEEEEEEeCCC
Confidence 99999999999999754
No 196
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.79 E-value=1.7e-18 Score=177.84 Aligned_cols=162 Identities=20% Similarity=0.216 Sum_probs=119.2
Q ss_pred CeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECC--E---Eeec---------CCcEEEEEeeCcEEEEEEccccC
Q psy16863 749 PKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDD--Q---QVVE---------SDNVKILKETLGVCHLKIHALEV 814 (1075)
Q Consensus 749 p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g--~---~i~~---------~~~~~~~~~~~~~~~L~I~~~~~ 814 (1075)
|.+...+....+.+|+++.|.|.+.+.|.+.+.|+|++ . .+.. ..++.+. ...+.+.|.|.+++.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~~ 80 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGS-GSGTDFTLTISDLEC 80 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEECSCCG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEe-cCCCEEEEEECCCCh
Confidence 34555567788999999999999999999999999942 1 1111 3567665 345678999999999
Q ss_pred CCCeEEEEEEEeCCc---eEEEEEEEEEEecCCCCCCeeeeec-ceeecCCCeEEEEEEEEc-cCCCeeEEEECCEEcCC
Q psy16863 815 ADQAEWKCIATNDFG---QSITSCFLKLNVPKHYKKPKFLEEL-KAVLSEGGAVNLECKVIG-VPQPTLKWFKDGRELKA 889 (1075)
Q Consensus 815 ~D~G~Y~C~A~N~~G---~~~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~~~L~C~v~g-~p~p~v~W~k~g~~l~~ 889 (1075)
+|+|.|+|.|.|..| .......|.|.. ...+|.+.... ...+.+|+.++|.|.+.| .|.|.|+|+|||.++..
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~--~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~ 158 (213)
T 3nl4_L 81 ADAATYYCQSTYENPTYVSFGGGTEVGVKG--DPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTT 158 (213)
T ss_dssp GGCEEEEEEECCSSTTTCEECCCEEEEEEC--CCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCS
T ss_pred HHCEEEEEecCCCCceeEEeCCCeEEEEeC--CCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCC
Confidence 999999999999877 333355666654 23455554322 223557999999999999 89999999999999864
Q ss_pred CC------------ee----EEEECCCCceeeEEEEEEEE
Q psy16863 890 GD------------IH----KIISGEDGTCCLGIYTCEAH 913 (1075)
Q Consensus 890 ~~------------~~----~i~~~~~~~~d~G~Y~C~a~ 913 (1075)
+. .+ .|.+......|+|.|+|.|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 159 GIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp SEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 31 11 23344444568999999999
No 197
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.78 E-value=1.2e-18 Score=178.56 Aligned_cols=180 Identities=16% Similarity=0.136 Sum_probs=124.6
Q ss_pred ccccceeecc--ceeEEEEEecCCCceEEEEecCCCeeeEEecC--CCcccc-CCCeEEEeeCCeEEEEEcccCCCCCEE
Q psy16863 248 RLHDIAVKVG--TRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQ--GDHPIF-GNRFRAINRDGRTELNIRRVRRDDGGR 322 (1075)
Q Consensus 248 ~~~~~~v~~g--~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~--~~~~~~-~~~~~~~~~~~~~~L~I~~~~~~d~G~ 322 (1075)
.+..+.+.+| +.++|.|.+.+ +.+.+.|+++ ++..+. +.++.... ...|.|.+++.+|+|.
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-----------p~~~v~w~~~~~~g~~~~~~~~~~~~~---~~~l~I~~v~~~D~G~ 78 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-----------SNLNVSLCARYPEKRFVPDGNRISWDS---KKGFTIPSYMISYAGM 78 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-----------TTCCEEEEEETTTEEECCCSSSCEEET---TTEEEEEGGGTTTCSE
T ss_pred CceEEEEecCCCccEEEeeccCC-----------CCcEEEEEhhcCCCccccCCCcccccC---CccEEEccCChhcCce
Confidence 4478889999 99999988764 3456778775 555554 33333222 1269999999999999
Q ss_pred EEEEEEeCCeeEE-EEEEEEEecCCCCCCeeeeec-CceeeccCCeEEEEEEEecCC--CcEEEEEECCEecCCCCc-EE
Q psy16863 323 YSVTASNESGYST-AKFELSVESQVPDAPAFIRRL-HDIAVKVGTRARLLVEIRSPT--EIKIHWYRNDRKLEENKI-YR 397 (1075)
Q Consensus 323 Y~C~a~n~~g~~~-~~~~l~V~~~~~~~p~~~~~~-~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~g~~l~~~~~-~~ 397 (1075)
|+|.|.|..+... ..+.|.|.. ..+|.+...+ ..+.+.+|++++|.|.+.|.| .+.+.|+|+|..+..... ..
T Consensus 79 Y~C~a~n~~~~~~s~~~~l~v~~--~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~ 156 (213)
T 2x1w_L 79 VFCEAKINDESYQSIMYIVVVVG--YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNR 156 (213)
T ss_dssp EEEEEC----CEECCCEEEEECB--CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEE
T ss_pred EEEEEEECCeeEEEEEEEEEEeC--CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEecc
Confidence 9999998544322 225666643 2345444443 445899999999999998854 468999999987543211 10
Q ss_pred EEE-------cCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCC
Q psy16863 398 TQH-------DGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPK 443 (1075)
Q Consensus 398 ~~~-------~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~ 443 (1075)
... ......|.|.+++.+|+|.|+|.|.|..|....++.|.|..+|
T Consensus 157 ~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 157 DLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp EECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC--
T ss_pred ccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccc
Confidence 100 1123479999999999999999999999999999999998665
No 198
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.78 E-value=6.8e-19 Score=180.98 Aligned_cols=170 Identities=18% Similarity=0.244 Sum_probs=130.6
Q ss_pred ecCceeeccCCeEEEEEEEecCC----CcEEEEEE----------------CCEecCC-----CCcEEEEE---cCCEEE
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSPT----EIKIHWYR----------------NDRKLEE-----NKIYRTQH---DGNFYF 406 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~p----~~~v~W~k----------------~g~~l~~-----~~~~~~~~---~g~~~~ 406 (1075)
.+..+.+.+|++++|.|.+.+.+ .+.|.|+| ++..+.. ..++.+.. ......
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 85 (214)
T 3jz7_A 6 PEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDAS 85 (214)
T ss_dssp CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCC
T ss_pred CCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCccc
Confidence 34567889999999999998876 46999998 4444432 33444322 113346
Q ss_pred EEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEE-ECCCCCeEEEEeCC-
Q psy16863 407 IDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKV-MGIPTPQLIWYKDN- 484 (1075)
Q Consensus 407 L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~v~W~~~g- 484 (1075)
|.|.+++.+|+|.|+|.|.|..|....++.|.|..+|... ... ....+.+|+.+.|.|.+ .|.|.+.|+|++++
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~--~~~--~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~ 161 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGT--RCF--VDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSD 161 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSC--EEE--EESCCBTTCCEEEEEECSBCCSSCEEEEEECST
T ss_pred EEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCc--eee--eecceecCCcEEEEecCCCCCCCCEEEEEECCC
Confidence 9999999999999999999999988888899998776432 222 12236789999999999 89999999999954
Q ss_pred -EeccC-----CCEEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEe
Q psy16863 485 -KKIKA-----GDIFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIAR 528 (1075)
Q Consensus 485 -~~l~~-----~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~ 528 (1075)
..+.. .....|.|..+..+|+|.|+|.|.|..|....++.|.|.
T Consensus 162 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 162 SQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp TCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred CCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 44431 123389999999999999999999999999888888775
No 199
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.78 E-value=8.7e-19 Score=179.69 Aligned_cols=163 Identities=15% Similarity=0.145 Sum_probs=117.7
Q ss_pred eeeeecCCeEEEEEEEecCCCCeEEEEEC--CEEee------------cCCcEEEEEeeCcEEEEEEccccCCCCeEEEE
Q psy16863 757 SCQATVNEEFKFTVQVSISPEPKVSWFRD--DQQVV------------ESDNVKILKETLGVCHLKIHALEVADQAEWKC 822 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v~g~p~p~v~W~k~--g~~i~------------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 822 (1075)
...+.+|++++|.|.+. |.+.+.|+|+ |..+. ...++.+.. ..+...|.|.+++.+|+|.|+|
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C 85 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSK-SGNTASLTVSGLQTDDEAVYYC 85 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEEESCCGGGCEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEc-cCCEEEEEECCCChhHCEEEEE
Confidence 56788999999999998 8899999994 32221 235666654 4567899999999999999999
Q ss_pred EEEeCCce--EEEEEEEEEEecCCCCCCeeeeec-ceeecCCCeEEEEEEEEccC--CCeeEEEECCEEcCCCC------
Q psy16863 823 IATNDFGQ--SITSCFLKLNVPKHYKKPKFLEEL-KAVLSEGGAVNLECKVIGVP--QPTLKWFKDGRELKAGD------ 891 (1075)
Q Consensus 823 ~A~N~~G~--~~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~~~L~C~v~g~p--~p~v~W~k~g~~l~~~~------ 891 (1075)
.|.|..|. ......|.|...+ ..+|.+.... ...+.+|+.++|.|.+.|.+ .+.|+|+|||.++..+.
T Consensus 86 ~~~~~~~~~~~~~~~~l~V~~~~-~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~ 164 (211)
T 3tv3_L 86 GSLVGNWDVIFGGGTKLTVLGQP-KAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPS 164 (211)
T ss_dssp EEEETTTEEEECCCEEEEECCSC-CBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCE
T ss_pred EEecCCCceeECCCceEEEeCCC-CcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCce
Confidence 99999883 3345667766322 2345554333 22234799999999999863 47899999999986521
Q ss_pred -----e----eEEEECCCCceeeEEEEEEEEeCCeeEEEEE
Q psy16863 892 -----I----HKIISGEDGTCCLGIYTCEAHNCMGTTSSSA 923 (1075)
Q Consensus 892 -----~----~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~ 923 (1075)
. ..|.+......|+|.|+|.|.|..|....++
T Consensus 165 ~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 165 KQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp ECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred ECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 1 1233333334579999999999998876654
No 200
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.78 E-value=1.8e-19 Score=184.52 Aligned_cols=167 Identities=20% Similarity=0.328 Sum_probs=130.2
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEec------------CCCCcEEEEEcCCEEEEEEcccCCCC
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKL------------EENKIYRTQHDGNFYFIDLSSVSLFD 416 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l------------~~~~~~~~~~~g~~~~L~I~~v~~~d 416 (1075)
++.+...+....+.+|+++.|.|.+.+.|.+.+.|+|++..+ ....++.... ..|.|.+++.+|
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~~~~~d 79 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP----TGITFKSVTRED 79 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET----TEEECSCCCTTS
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec----cEEEEeeCCHHH
Confidence 556666778889999999999999999899999999988652 1123333322 469999999999
Q ss_pred ceeEEEEEEeCCCc--eeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEE-ECCCCCeEEEEeCCEeccCCC--
Q psy16863 417 SGRWTCLAENAVGR--SHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKV-MGIPTPQLIWYKDNKKIKAGD-- 491 (1075)
Q Consensus 417 ~G~Y~C~a~n~~g~--~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~v~W~~~g~~l~~~~-- 491 (1075)
+|.|+|.|.|..|. ......|.|..+|... ... ....+.+|+.+.|.|.+ .|.|.+.+.|++++..+....
T Consensus 80 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~--~~~--~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~ 155 (209)
T 1nbq_A 80 TGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKP--TVN--IPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKS 155 (209)
T ss_dssp CSEEEEEEEETTSSCEECCEEECCEEBCCCCC--CCC--CBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSS
T ss_pred CcEEEEEEecCCCCccceEEEEEEEecCCcCC--Ccc--cccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCcccc
Confidence 99999999998663 3456677777665432 111 12347889999999997 899999999999999886532
Q ss_pred --------------EEEEEeCCCCCCCcEEEEEEEEecceeeEEEE
Q psy16863 492 --------------IFALTANPKDPSSLGTYTCEAVNCMGAAFSTS 523 (1075)
Q Consensus 492 --------------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 523 (1075)
...|.|..+..+|+|.|+|.|.|..|....+.
T Consensus 156 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~ 201 (209)
T 1nbq_A 156 TRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSN 201 (209)
T ss_dssp SSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECC
T ss_pred ceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccc
Confidence 34789999999999999999999999874443
No 201
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.78 E-value=1.4e-18 Score=178.45 Aligned_cols=171 Identities=17% Similarity=0.285 Sum_probs=128.6
Q ss_pred eeeeecCceeeccCCeEEEEEEEecCCCcEEEEEEC--CEec------------CCCCcEEEEEcCCEEEEEEcccCCCC
Q psy16863 351 AFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRN--DRKL------------EENKIYRTQHDGNFYFIDLSSVSLFD 416 (1075)
Q Consensus 351 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~--g~~l------------~~~~~~~~~~~g~~~~L~I~~v~~~d 416 (1075)
.+...+ .+.+.+|++++|.|.+.+.|.+.|.|||. +..+ ....++.+...+....|.|.+++.+|
T Consensus 3 ~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 81 (213)
T 3mj8_L 3 TLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGD 81 (213)
T ss_dssp CBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhh
Confidence 344444 77899999999999999889999999992 2211 02346776667777889999999999
Q ss_pred ceeEEEEEEeCCC---ceeeEEEEEeecCCCCCCCeeeeec-ceEEecCCeEEEEEEEECC-CC-CeEEEEeCCEeccCC
Q psy16863 417 SGRWTCLAENAVG---RSHCSCELSVLVPKAYKAPFFTKEL-EAILTEQGTVSLECKVMGI-PT-PQLIWYKDNKKIKAG 490 (1075)
Q Consensus 417 ~G~Y~C~a~n~~g---~~~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~v~l~C~~~g~-p~-~~v~W~~~g~~l~~~ 490 (1075)
+|.|+|.|.|..| .......|.|...+. .+|.+...+ ...+.+|+.++|.|.+.|. |+ +.|+|+|||.++..+
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~-~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 160 (213)
T 3mj8_L 82 EADYYCQSWDGTNSAWVFGSGTKVTVLGQPN-AAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQG 160 (213)
T ss_dssp CEEEEEEEEETTTTEEEEBCCEEEEEECSCC-BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred CEEEEEEeccCCcceeEEcCceEEEEeCCCC-CCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCC
Confidence 9999999999988 345567788874332 344444333 2234479999999999985 44 399999999998642
Q ss_pred ----------CEE----EEEeCCCCCCCcEEEEEEEEecceeeEEEE
Q psy16863 491 ----------DIF----ALTANPKDPSSLGTYTCEAVNCMGAAFSTS 523 (1075)
Q Consensus 491 ----------~~~----~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 523 (1075)
..+ .|.|..+..+|+|.|+|.|.|..+....++
T Consensus 161 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 161 VKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp EEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred cccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 222 478888888999999999999987665543
No 202
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.78 E-value=2.3e-18 Score=176.62 Aligned_cols=166 Identities=13% Similarity=0.114 Sum_probs=115.9
Q ss_pred cceeeeecCCeEEEEEEEecCC---CCeEEEEECC--EEe------------ecCCcEEEEEeeCcEEEEEEccccCCCC
Q psy16863 755 LKSCQATVNEEFKFTVQVSISP---EPKVSWFRDD--QQV------------VESDNVKILKETLGVCHLKIHALEVADQ 817 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g~p---~p~v~W~k~g--~~i------------~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 817 (1075)
+....+.+|+++.|.|.+.+.| .+.|.|+|++ ..+ ....++.+.. ..+...|.|.+++.+|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~ 85 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL-IGDKAALTITGAQTEDE 85 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGC
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEe-eCCEEEEEECCCCccCC
Confidence 5667799999999999999987 4799999963 332 1134666544 44577999999999999
Q ss_pred eEEEEEEEeCCceEE-EEEEEEEEecCCCCCCeeeeec-ceeecCCCeEEEEEEEEccCCC--eeEEEECCEEcCCCCe-
Q psy16863 818 AEWKCIATNDFGQSI-TSCFLKLNVPKHYKKPKFLEEL-KAVLSEGGAVNLECKVIGVPQP--TLKWFKDGRELKAGDI- 892 (1075)
Q Consensus 818 G~Y~C~A~N~~G~~~-~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~~~L~C~v~g~p~p--~v~W~k~g~~l~~~~~- 892 (1075)
|.|+|.|.|..|... ....|.|...+ ..+|.+.... ...+..|+.++|.|.+.|.|++ .|+|+|||.++..+..
T Consensus 86 G~Y~C~~~~~~~~~~~~~~~l~V~~~~-~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~ 164 (212)
T 1q0x_L 86 AIYFCALWSNNKLVFGGGTKLTVLGQP-KSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMET 164 (212)
T ss_dssp EEEEEEEECSSCEEECCCEEEEECCSC-CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEE
T ss_pred EEEEEEEecCchhhcCCCeEEEEecCC-CCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeec
Confidence 999999999877432 23455554322 1345554322 2223478899999999986544 8999999999865421
Q ss_pred --------------eEEEECCCCceeeEEEEEEEEeCCeeEEEE
Q psy16863 893 --------------HKIISGEDGTCCLGIYTCEAHNCMGTTSSS 922 (1075)
Q Consensus 893 --------------~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~ 922 (1075)
..|.+......|+|.|+|.|.|..+....+
T Consensus 165 ~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (212)
T 1q0x_L 165 TQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKT 208 (212)
T ss_dssp CCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEE
T ss_pred CCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeee
Confidence 122233333357899999999998765443
No 203
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.78 E-value=1.8e-18 Score=177.10 Aligned_cols=162 Identities=17% Similarity=0.227 Sum_probs=116.5
Q ss_pred cceeeeecCCeEEEEEEEecCCCCeEEEEEC--CEEe------------ecCCcEEEEEeeCcEEEEEEccccCCCCeEE
Q psy16863 755 LKSCQATVNEEFKFTVQVSISPEPKVSWFRD--DQQV------------VESDNVKILKETLGVCHLKIHALEVADQAEW 820 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~--g~~i------------~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 820 (1075)
+....+.+|++++|.|.+.+.|.+.|.|||+ |..+ ....++.+.. ..+.+.|.|.+++.+|+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y 85 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSG-SGTDFTLTIDPVEADDTAIY 85 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEe-cCCEEEEEECCCCHHHCeEE
Confidence 5567799999999999999999999999994 2222 1125666654 44577999999999999999
Q ss_pred EEEEEeCCceEEE-EEEEEEEecCCCCCCeeeeec-ceeecCCCeEEEEEEEEcc-CCC-eeEEEECCEEcCCC-C----
Q psy16863 821 KCIATNDFGQSIT-SCFLKLNVPKHYKKPKFLEEL-KAVLSEGGAVNLECKVIGV-PQP-TLKWFKDGRELKAG-D---- 891 (1075)
Q Consensus 821 ~C~A~N~~G~~~~-s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~~~L~C~v~g~-p~p-~v~W~k~g~~l~~~-~---- 891 (1075)
+|.|.|..|.... ...|.|..+. .+|.+.... ...+.+|+.++|.|.+.|. |.+ .|+|+|||.++..+ .
T Consensus 86 ~C~~~~~~~~~~~~~~~l~V~~~~--~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 163 (210)
T 1lk3_L 86 FCQQSWNGPLTFGAGTKLELKRAD--AAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVT 163 (210)
T ss_dssp EEEECSSSSCEECCCEEEEECCCC--BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEEC
T ss_pred EEEEEcCCCceeCCCEEEEEcCCC--cCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccC
Confidence 9999998875432 3456665422 245544322 2223479999999999984 443 89999999998755 1
Q ss_pred -------ee----EEEECCCCceeeEEEEEEEEeCCeeE
Q psy16863 892 -------IH----KIISGEDGTCCLGIYTCEAHNCMGTT 919 (1075)
Q Consensus 892 -------~~----~i~~~~~~~~d~G~Y~C~a~N~~G~~ 919 (1075)
.+ .|.+......|+|.|+|.|.|.....
T Consensus 164 ~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 164 DQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 11 34444444568999999999987643
No 204
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=1.4e-18 Score=180.89 Aligned_cols=180 Identities=14% Similarity=0.097 Sum_probs=127.7
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+.. .+..|++++|.|.+.+ +.+.+.|+|+|..+....... ........|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~--~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 81 (242)
T 1p6f_A 6 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKP--PERINKVKFYIPDMNSRMAGQYSCIYRV 81 (242)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSS--CTTCCEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccc--cCCcceeEEEecCCCcccCeEEEEEEec
Confidence 57777766665 7899999999999875 456999999998775211000 0112345899999999999999999999
Q ss_pred CCceEE--EEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcC-----CCCeeEEEECC
Q psy16863 827 DFGQSI--TSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELK-----AGDIHKIISGE 899 (1075)
Q Consensus 827 ~~G~~~--~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~-----~~~~~~i~~~~ 899 (1075)
..|... ..+.|.|.. .+.+|.+.......+.+|+.++|.|.+.+. .+.+.|+|||..+. ......|.+..
T Consensus 82 ~~~~s~~S~~~~L~V~~--~~~~P~i~~~p~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~ 158 (242)
T 1p6f_A 82 GELWSEPSNLLDLVVTE--MYDTPTLSVHPGPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQRGYGKVQAEFPLGP 158 (242)
T ss_dssp TTEECCCCCCEEEEEEC--CSCCCEEEEESCSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEEEEECSSEEEEEEEE
T ss_pred CCccccCCcceEEEeec--ccCCCceEccCCCccCCCCcEEEEEecCCC-CCEEEEEECCCccCccccCCCceEEEEeCC
Confidence 766433 245555553 234566655444567899999999998764 56999999997664 34456677777
Q ss_pred CCceeeEEEEEEEEeCC--e-eEEEEEEEEEecCChh
Q psy16863 900 DGTCCLGIYTCEAHNCM--G-TTSSSAALLGFEDKSQ 933 (1075)
Q Consensus 900 ~~~~d~G~Y~C~a~N~~--G-~~~~~~~l~v~~~~~~ 933 (1075)
....|+|.|+|.|.|.. + ..+....|.|.+....
T Consensus 159 v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~ 195 (242)
T 1p6f_A 159 VTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIEN 195 (242)
T ss_dssp CCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC----
T ss_pred CccccCEEEEEEEECCCCcccCCCCCEEEEEeccCCC
Confidence 88889999999999974 2 3344567777665443
No 205
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.77 E-value=6.6e-19 Score=172.64 Aligned_cols=152 Identities=20% Similarity=0.238 Sum_probs=114.5
Q ss_pred eeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecC------------CcEEEEEeeCcEEEEEEccccCCCCeEEEEEE
Q psy16863 757 SCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVES------------DNVKILKETLGVCHLKIHALEVADQAEWKCIA 824 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~------------~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A 824 (1075)
.+.+..|++++|.|.+. .|.+.|.|+|++..|... .++.+. .....|.|.+++.+|+|.|+|.|
T Consensus 4 ~v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~---~~~~sL~I~~v~~~DsG~Y~C~~ 79 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLD---TVSGSLTIYNLTSSDEDEYEMES 79 (171)
T ss_dssp EEEEETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEEC---TTTCCEEECSCCGGGCEEEEEEC
T ss_pred EEEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEe---CCCCeEEECCCChhhCceEEEEE
Confidence 45688999999999995 488999999998755321 122221 12237999999999999999999
Q ss_pred EeCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCeeEEEECCCCcee
Q psy16863 825 TNDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDIHKIISGEDGTCC 904 (1075)
Q Consensus 825 ~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~~~i~~~~~~~~d 904 (1075)
.|..| ...+.|.|..++ ..|.+..... . .+|.|.+.|.|.|.|+|+|||..|..+....+.... ..|
T Consensus 80 ~n~~~--~~~~~L~V~~~~--~~p~i~~~~~-----~--~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~~l~~~~--~~~ 146 (171)
T 1ccz_A 80 PNITD--TMKFFLYVLEMV--SKPMIYWECS-----N--ATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQW--TNL 146 (171)
T ss_dssp TTCCS--CEEEEEEEECCC--CCCEEEEETT-----T--TEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEEC--SCC
T ss_pred eCCCC--cEEEEEEEECcC--CCCEEEEecC-----C--cEEEEEeCCCCCcEEEEEECCEECcCCcceEEEEec--cCC
Confidence 99988 457778887653 3454432221 1 379999999999999999999998766555554432 456
Q ss_pred eEEEEEEEEeCCeeEEEEEEE
Q psy16863 905 LGIYTCEAHNCMGTTSSSAAL 925 (1075)
Q Consensus 905 ~G~Y~C~a~N~~G~~~~~~~l 925 (1075)
+|.|+|.|.|.+|..++.+.|
T Consensus 147 ~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 147 RAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp SSCEEEEEEETTEEEEEEECC
T ss_pred CceEEEEEEcccCcccceeEE
Confidence 899999999999998877655
No 206
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.77 E-value=9.2e-19 Score=185.03 Aligned_cols=248 Identities=15% Similarity=0.164 Sum_probs=102.5
Q ss_pred eeeecCCeEEEEEEEecCCCCe-EEEEE--CCEEc-CCCC---eEEEeecCCCceEEEEEEecCceEEEEEEEEEEeccc
Q psy16863 660 AVMTDDGLVSFECKVVGFPTPT-LQWFK--DNEEL-KPGD---VYQLTGTSSLGSYCCVAKNVMGKAESSTQLTIEDIRN 732 (1075)
Q Consensus 660 ~~~~~g~~~~l~C~v~g~p~p~-v~W~k--~g~~l-~~~~---~~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~ 732 (1075)
..+.+|+++.|.|.+.. +.|. +.|.- .+..+ ..|. .+.+....+.|.|+|.+....-..+..+.|.|...+
T Consensus 9 ~~V~~G~sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~g~~~~~~~l~~v~~~~~y~C~~~~~~~~~~~~v~l~V~~~P- 86 (291)
T 1mq8_A 9 VILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVYWTP- 86 (291)
T ss_dssp EEECTTCEEEEEEEECC-SSCSEEEEECSSCCCCCCCSCSSEEEEEEESCCSCCCCEEEEECSSCEEEEECEEEECBCC-
T ss_pred cEEcCCCeEEEEEeCCC-CCCccceEEecCCCcccccCCCceEEEEEEecccCCeEEEEEEcCCccEEEEEEEEEecCC-
Confidence 35778999999999964 5554 88863 22223 2333 366666666688999996433334445566665321
Q ss_pred cCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCC---eEEEEECCEEeecCCcEEEEEeeCcEEEEEE
Q psy16863 733 HLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEP---KVSWFRDDQQVVESDNVKILKETLGVCHLKI 809 (1075)
Q Consensus 733 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p---~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I 809 (1075)
..|.+. +....+.+|+.++|+|.+.|.+++ +|+|||+++.+...... .......|.|
T Consensus 87 --------------~~v~I~--~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~----~~~~~~~l~~ 146 (291)
T 1mq8_A 87 --------------ERVELA--PLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV----GEPAEVTTTV 146 (291)
T ss_dssp --------------SCCCBC--CCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECC----BTTEEEEEEC
T ss_pred --------------CCCEEe--cCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCC----CCCceEEEEe
Confidence 112211 222347889999999999986443 69999999888643211 1223456777
Q ss_pred ccccCCCCeEEEEEEEeCCce--------EEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCC---ee
Q psy16863 810 HALEVADQAEWKCIATNDFGQ--------SITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQP---TL 878 (1075)
Q Consensus 810 ~~~~~~D~G~Y~C~A~N~~G~--------~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p---~v 878 (1075)
.....+|.+.|+|+|.|.++. .+....|.|.++|.. .+.... . ..+.+|+.++|+|.+.|.|++ .|
T Consensus 147 ~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~-~~~~~~-p-~~l~eG~~v~l~C~~~g~~P~~~~~v 223 (291)
T 1mq8_A 147 LVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPAT-PPQLVS-P-RVLEVDTQGTVVCSLDGLFPVSEAQV 223 (291)
T ss_dssp CCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC------------------------------------------
T ss_pred eeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCC-CceecC-C-cCccCCCeEEEEEEcCCCCCCcccEE
Confidence 777788888999999998773 233467777766422 122111 1 146789999999999998665 59
Q ss_pred EEEECCEEcCC-----CCeeEEEECC-CCc--eeeEEEEEEEEeCCeeEEEEEEEEEecCCh
Q psy16863 879 KWFKDGRELKA-----GDIHKIISGE-DGT--CCLGIYTCEAHNCMGTTSSSAALLGFEDKS 932 (1075)
Q Consensus 879 ~W~k~g~~l~~-----~~~~~i~~~~-~~~--~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 932 (1075)
.|+++|+.+.. |+...+.... ... .+.+.|+|.|.|...+.++.-.|.|++.|.
T Consensus 224 ~w~~~g~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~~ 285 (291)
T 1mq8_A 224 HLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPA 285 (291)
T ss_dssp --------------------------------------------------------------
T ss_pred EEEECCEecCceeeecCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCCC
Confidence 99999998863 2322221111 112 235777888888555566677777776443
No 207
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.77 E-value=4.3e-19 Score=179.97 Aligned_cols=143 Identities=12% Similarity=0.201 Sum_probs=102.4
Q ss_pred eecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEE
Q psy16863 760 ATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKL 839 (1075)
Q Consensus 760 ~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V 839 (1075)
+..|++++|.|.+ |.|.|+|+|||.++.... .....|.|.+++.+|+|.|+|.|.|..+. ...|.|
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~~--------~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~---~~~v~v 80 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFLT--------EDKKKWNLGSNAKDPRGMYQCKGSQNKSK---PLQVYY 80 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEEE--------SSCCCEEEEEGGGCCEEEEEEESSSSCCC---CEEEEE
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCCC--------CCCCeEEeCCCCcCCCEEEEEEecCCCCe---eEEEEE
Confidence 4689999999998 889999999999886431 11237999999999999999998664322 233444
Q ss_pred Ee------c-------------------C-CCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCC---
Q psy16863 840 NV------P-------------------K-HYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAG--- 890 (1075)
Q Consensus 840 ~~------~-------------------~-~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~--- 890 (1075)
.. + . ....+.+......+..+|++++|.|. |.|.|.|+|+|||..+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~ 158 (204)
T 1sy6_A 81 RMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDD 158 (204)
T ss_dssp EC------------------------------------CCCCEEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTC
T ss_pred EEeccccccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCC
Confidence 30 0 0 00112222222222338999999999 8999999999999988643
Q ss_pred -----CeeEEEECCC-CceeeEEEEEEEEeCCee
Q psy16863 891 -----DIHKIISGED-GTCCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 891 -----~~~~i~~~~~-~~~d~G~Y~C~a~N~~G~ 918 (1075)
....|.+... ...|+|.|+|.|.|..|.
T Consensus 159 ~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~ 192 (204)
T 1sy6_A 159 KNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPE 192 (204)
T ss_dssp TTEEEETTEEEETTCCHHHHCEEEEEEETTSCGG
T ss_pred ceEecCCCEEEEeeCCccccCEEEEEEeccCCCC
Confidence 1235777888 889999999999999996
No 208
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.77 E-value=9.4e-18 Score=176.72 Aligned_cols=165 Identities=13% Similarity=0.255 Sum_probs=119.5
Q ss_pred ceeeeecCCeEEEEEEEecCC--CCeEEEEECC--EEe-----------------ecCCcEEEEEe-eCcEEEEEEcccc
Q psy16863 756 KSCQATVNEEFKFTVQVSISP--EPKVSWFRDD--QQV-----------------VESDNVKILKE-TLGVCHLKIHALE 813 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~~i-----------------~~~~~~~~~~~-~~~~~~L~I~~~~ 813 (1075)
....+.+|++++|.|.+.|.| .+.|.|+|++ ..+ ....++.+..+ ..+...|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 346788999999999999987 6889999942 111 01346766554 2457789999999
Q ss_pred CCCCeEEEEEEEeCCceEE--EEEEEEEEecCC----------CCCCeeeeecce-eecCCCeEEEEEEEEccCCCeeEE
Q psy16863 814 VADQAEWKCIATNDFGQSI--TSCFLKLNVPKH----------YKKPKFLEELKA-VLSEGGAVNLECKVIGVPQPTLKW 880 (1075)
Q Consensus 814 ~~D~G~Y~C~A~N~~G~~~--~s~~l~V~~~~~----------~~~p~~~~~~~~-~~~~g~~~~L~C~v~g~p~p~v~W 880 (1075)
.+|+|.|+|.|.|..+... ..+.|.|..++. ..++.+...... .+.+|++++|.|.+.|.|.|.|+|
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W 169 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAW 169 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEE
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEE
Confidence 9999999999999844322 234666665421 223445444433 378999999999999999999999
Q ss_pred EE--CCEEcC---------------------CCCeeEEEECCCCceeeEEEEEEEEeCCeeEE
Q psy16863 881 FK--DGRELK---------------------AGDIHKIISGEDGTCCLGIYTCEAHNCMGTTS 920 (1075)
Q Consensus 881 ~k--~g~~l~---------------------~~~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~ 920 (1075)
|| +|..+. .+....|.+......|+|.|+|.|.|..+...
T Consensus 170 ~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~ 232 (247)
T 2ghw_B 170 YQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTF 232 (247)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEE
T ss_pred EEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceE
Confidence 99 665431 12234677888888999999999999654443
No 209
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.77 E-value=8.2e-19 Score=175.41 Aligned_cols=159 Identities=16% Similarity=0.203 Sum_probs=124.1
Q ss_pred ceeeccCCeEEEEEEEecCCCcEEEEEECCEe--cCC------------CCcEEEEE---cCCEEEEEEcccCCCCceeE
Q psy16863 358 DIAVKVGTRARLLVEIRSPTEIKIHWYRNDRK--LEE------------NKIYRTQH---DGNFYFIDLSSVSLFDSGRW 420 (1075)
Q Consensus 358 ~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~--l~~------------~~~~~~~~---~g~~~~L~I~~v~~~d~G~Y 420 (1075)
.+.+.+|++++|.|.+.+.|.+.+.|+|++.. +.. ..++.... ......|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 45788999999999998888899999999863 211 12232221 22234599999999999999
Q ss_pred EEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCCEEEEEeCCC
Q psy16863 421 TCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGDIFALTANPK 500 (1075)
Q Consensus 421 ~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~~~~l~i~~~ 500 (1075)
+|.+.|..| .+.|.|... ..+....+.+|+.+.|.|.+.+.|.+.++|++++..+.. ....|.|..+
T Consensus 84 ~C~~~~~~~----~~~l~V~~~--------~~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~-~~~~L~i~~v 150 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFGL--------TANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ-GGKTLSVSQL 150 (184)
T ss_dssp EEEETTEEE----EEEEEEEEE--------EESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEE-ESSEEEESSC
T ss_pred EEEEEcCCC----cEEEEEEEe--------cCCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcccc-CceEEEEecC
Confidence 999987644 445655521 122233578999999999999999999999999887643 3357999999
Q ss_pred CCCCcEEEEEEEEecceeeEEEEEEEEec
Q psy16863 501 DPSSLGTYTCEAVNCMGAAFSTSRVIARG 529 (1075)
Q Consensus 501 ~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~ 529 (1075)
..+|+|.|+|.|.|..|....++.|.|.+
T Consensus 151 ~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~ 179 (184)
T 2ny1_B 151 ELQDSGTWTCTVLQNQKKVEFKIDIVVLA 179 (184)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CcCCCeEEEEEEEECCceEEEEEEEEEEe
Confidence 99999999999999999999999999875
No 210
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.76 E-value=1.3e-18 Score=185.96 Aligned_cols=182 Identities=15% Similarity=0.187 Sum_probs=123.1
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEe---cCCCCeEEEEECCEEeecC------------------CcEEEEEe-eCcEE
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVS---ISPEPKVSWFRDDQQVVES------------------DNVKILKE-TLGVC 805 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~---g~p~p~v~W~k~g~~i~~~------------------~~~~~~~~-~~~~~ 805 (1075)
.+.+...+....+.+|+++.|.|.+. +.|.+.|.|+|++...... .++.+... ..+..
T Consensus 5 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 84 (268)
T 3mj6_A 5 LPGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDG 84 (268)
T ss_dssp -------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBC
T ss_pred ccccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEE
Confidence 34455556677899999999999998 7788899999966422111 22322110 11235
Q ss_pred EEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEE---EccCCCeeEEEE
Q psy16863 806 HLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKV---IGVPQPTLKWFK 882 (1075)
Q Consensus 806 ~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v---~g~p~p~v~W~k 882 (1075)
.|.|.+++.+|+|.|+|.|.|..+....+..+.|.+.+. .|. ...+.+|+.++|.|.+ .+.|.|.|+|+|
T Consensus 85 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~--~p~-----~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~ 157 (268)
T 3mj6_A 85 SLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPE--EPR-----DLRVRVGDTTQMRCSIQSTEEKRVTKVNWMF 157 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECC--CCS-----EEEEETTCCEEECCBCEESSSSCCCEEEEEE
T ss_pred EEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEecc--CCC-----ccccccCCcEEEEEEecCCCCCCccceEEEe
Confidence 799999999999999999999877655555555554322 222 2336789999999999 577999999999
Q ss_pred C-CEEcCC--------------------------------CCeeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEec
Q psy16863 883 D-GRELKA--------------------------------GDIHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFE 929 (1075)
Q Consensus 883 ~-g~~l~~--------------------------------~~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 929 (1075)
+ |..+.. .....|.+......|+|.|+|.|.|..|..+.++.|.|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 237 (268)
T 3mj6_A 158 SSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQ 237 (268)
T ss_dssp ECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEc
Confidence 3 321100 1234567777888999999999999999999999999976
Q ss_pred CChhhhh
Q psy16863 930 DKSQIEK 936 (1075)
Q Consensus 930 ~~~~~~~ 936 (1075)
.++.+..
T Consensus 238 ~~p~~~~ 244 (268)
T 3mj6_A 238 DEFQRTI 244 (268)
T ss_dssp C------
T ss_pred CCCeeee
Confidence 6555443
No 211
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.76 E-value=1.7e-15 Score=186.26 Aligned_cols=419 Identities=13% Similarity=0.127 Sum_probs=241.0
Q ss_pred ccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEccc-CCCCceeEEEEEEeCCCceeeEEEEEee
Q psy16863 362 KVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSV-SLFDSGRWTCLAENAVGRSHCSCELSVL 440 (1075)
Q Consensus 362 ~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v-~~~d~G~Y~C~a~n~~g~~~~s~~l~V~ 440 (1075)
..+..+.|.|.+.|.|.+.+.|.|+|..+....+ ..+.|..+ ....++.|.|.+.|..|.... ..+.+.
T Consensus 89 ~~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~---------~~~~i~~~~~~~~~l~~~~va~~~~G~~~~-~~v~~~ 158 (731)
T 2v5y_A 89 SPPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNR---------AELAISTFWPNFYQVIFEVITSGHQGYLAI-DEVKVL 158 (731)
T ss_dssp SCSEEEEEEEEETTCCCCSEEEEECCCCCSSCEE---------EEEEECCCTTSCEEEEEEEEECSSCCEEEE-CCBEEE
T ss_pred CCcceEEEEEecCCCCccceeEEEeCCcCCceeE---------EEEEEeecCCCceEEEEEEEecCCceEEEE-eeEEee
Confidence 3345899999999999999999999987643222 12445544 233357888888887776542 223343
Q ss_pred cCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEE-EE--eCCEeccCCC---------EEEEEeCCCCCCCcEEE
Q psy16863 441 VPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLI-WY--KDNKKIKAGD---------IFALTANPKDPSSLGTY 508 (1075)
Q Consensus 441 ~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~-W~--~~g~~l~~~~---------~~~l~i~~~~~~d~G~Y 508 (1075)
..+...+|.+.......+.+|+++.|.|.+.|.|.|.+. |+ +||..+.... ...|.|..+...|+|.|
T Consensus 159 ~~~~~~~p~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y 238 (731)
T 2v5y_A 159 GHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKY 238 (731)
T ss_dssp SSCCSSSCEECCCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEE
T ss_pred ecccccccccccccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEE
Confidence 333345566665444558899999999999999999888 88 7887764321 34799999999999999
Q ss_pred EEEEEeccee-eEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCC--CC---ce
Q psy16863 509 TCEAVNCMGA-AFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPP--WP---RS 582 (1075)
Q Consensus 509 ~C~a~n~~g~-~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p--~p---~~ 582 (1075)
+|.|.|..|. ....+.|.|..++. ....+... ......+.|.|.....+ .+ ..
T Consensus 239 ~c~A~n~~G~~~s~~~~l~V~~~P~--------------------~~~~p~~~-~~~~~~v~l~w~~~~~~g~~~i~~Y~ 297 (731)
T 2v5y_A 239 RCMIRTEGGVGISNYAELVVKEPPV--------------------PIAPPQLA-SVGATYLWIQLNANSINGDGPIVARE 297 (731)
T ss_dssp EEEEEETTEEEECCCEEEEEECCCC--------------------BSSCCEEE-EECSSCEEEECCCSSBSSCSCCCEEE
T ss_pred EEEEECCCCCcceeeEEEEEecCCC--------------------CCCCccee-ccCCceEEEEeCCcccCCCCccEEEE
Confidence 9999999998 66667788864221 11111111 22356788888764321 12 14
Q ss_pred EEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEE--CCCCceeeeeEEEEEeCCC--CcCCCceeecc
Q psy16863 583 IYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVAT--SSSGVKQFSAAYVHVLMPK--NYRKPRFVESL 658 (1075)
Q Consensus 583 v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~--n~~g~~~~~~~~l~v~~p~--~~~~p~~~~~~ 658 (1075)
+.|...+. .+...... ....+.|.++...+.+.|+|.|. |..|....+.. +.+..+. ...+|..+
T Consensus 298 v~~~~~~~------~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~-~~~~t~~~~p~~~P~~~--- 366 (731)
T 2v5y_A 298 VEYCTASG------SWNDRQPV-DSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPA-LRTRTKCADPMRGPRKL--- 366 (731)
T ss_dssp EEEEESSS------SCEEEEEC-CSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCC-EEEECCCCCCSCCCEEE---
T ss_pred EEEEECCC------CceEEecc-CcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCc-EEeeecCCCCCCCCcee---
Confidence 56655432 22222222 12478999999999999999999 99998764332 3333221 11233221
Q ss_pred ceeeecCCeEEEEEEEecC-----CC--CeEEEEECC--E-------Ec---CCCCeEEEeecCCC--ceEEEEEEecCc
Q psy16863 659 KAVMTDDGLVSFECKVVGF-----PT--PTLQWFKDN--E-------EL---KPGDVYQLTGTSSL--GSYCCVAKNVMG 717 (1075)
Q Consensus 659 ~~~~~~g~~~~l~C~v~g~-----p~--p~v~W~k~g--~-------~l---~~~~~~~~~~~~d~--G~Y~C~a~N~~g 717 (1075)
.........+.|....-.. +. -.|.|...+ . .+ .....+.+.+.... ..|++.|.|..|
T Consensus 367 ~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 446 (731)
T 2v5y_A 367 EVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEG 446 (731)
T ss_dssp EEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSC
T ss_pred EEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCC
Confidence 1112233456666654211 11 124444321 0 01 12234566555443 455778999999
Q ss_pred eEEEEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeee-cCCeEEEEEEEecCCCC-----eEEEEECCEE---
Q psy16863 718 KAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQAT-VNEEFKFTVQVSISPEP-----KVSWFRDDQQ--- 788 (1075)
Q Consensus 718 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~g~~~~l~C~v~g~p~p-----~v~W~k~g~~--- 788 (1075)
... +..+.+..... +|.-... ....+. ....+.|.-.....+.. .|.|...+..
T Consensus 447 ~s~-S~~~~~~T~~~---------------~P~~p~~-~~~~~~~~~~si~l~W~~P~~~~g~i~~Y~V~~~~~~~~~~~ 509 (731)
T 2v5y_A 447 RKE-SQELIVQTDED---------------LPGAVPT-ESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPE 509 (731)
T ss_dssp EEE-CCCEEEECCCC---------------CCCCCCT-TTCEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEEEECC--
T ss_pred CCC-CceEEEEccCC---------------CCCCCCc-ceEEeeecCCeEEEEEcCCCCCCCCccceEEEEEECcCCCcc
Confidence 864 55555543211 1111000 011111 23455555443221111 2333332211
Q ss_pred eec-CCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEe
Q psy16863 789 VVE-SDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNV 841 (1075)
Q Consensus 789 i~~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~ 841 (1075)
+.. .....+.. ......++|.++.+.-...|+..|.|..|....+ .+.+..
T Consensus 510 ~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s-~~~~~T 561 (731)
T 2v5y_A 510 IDLSNQSGRVSK-LGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPA-TNQFTT 561 (731)
T ss_dssp -CCCCCEEEEEE-ETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEE-EEEEEC
T ss_pred ccccCcceEEee-cCCcceEEecCCCCCCEEEEEEEEEeCCccCCCc-ccEEEc
Confidence 000 11111221 2223478999999999999999999999987665 344443
No 212
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.76 E-value=2.2e-18 Score=177.73 Aligned_cols=168 Identities=17% Similarity=0.242 Sum_probs=117.1
Q ss_pred ceeeeecCCeEEEEEEEecCC--CCeEEEEEC--CEEee-----------------cCCcEEEEEee-CcEEEEEEcccc
Q psy16863 756 KSCQATVNEEFKFTVQVSISP--EPKVSWFRD--DQQVV-----------------ESDNVKILKET-LGVCHLKIHALE 813 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~--g~~i~-----------------~~~~~~~~~~~-~~~~~L~I~~~~ 813 (1075)
....+.+|++++|.|.+.+.| .+.+.|+|+ |..+. ...++.+..+. .+...|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (219)
T 1c1e_H 8 GPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLK 87 (219)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCC
T ss_pred CCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCC
Confidence 345688999999999999876 689999997 43321 13466665432 346789999999
Q ss_pred CCCCeEEEEEEEeCCceE--E--EEEEEEEEecCCCCCCeeee-ecceeecCCCeEEEEEEEEc-cCCC-eeEEEECCEE
Q psy16863 814 VADQAEWKCIATNDFGQS--I--TSCFLKLNVPKHYKKPKFLE-ELKAVLSEGGAVNLECKVIG-VPQP-TLKWFKDGRE 886 (1075)
Q Consensus 814 ~~D~G~Y~C~A~N~~G~~--~--~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~~~L~C~v~g-~p~p-~v~W~k~g~~ 886 (1075)
.+|+|.|+|.|.|..|.. . ..+.|.|...+ ..+|.+.. .....+.+|+.++|.|.+.| .|.| .|+|+|||..
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 166 (219)
T 1c1e_H 88 NEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAK-TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 166 (219)
T ss_dssp GGGCEEEEEEEEETTTTEEEEECCCEEEEECCCC-CBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred cccCEEEEEEEeccCcccceeecCceEEEEecCC-CCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCcc
Confidence 999999999999987422 1 24566666532 23344432 22223568999999999999 8998 9999999986
Q ss_pred cCC--------CCe----eEEEECCCCceeeEEEEEEEEeCCeeEEEEEEE
Q psy16863 887 LKA--------GDI----HKIISGEDGTCCLGIYTCEAHNCMGTTSSSAAL 925 (1075)
Q Consensus 887 l~~--------~~~----~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 925 (1075)
+.. +.. ..|.+... ..|.|.|+|.|.|..|.......|
T Consensus 167 ~~~~~~~~~~~~~~~~~~s~L~i~~~-~~d~g~Y~C~a~n~~~~~~~~~~i 216 (219)
T 1c1e_H 167 SGVHTFPAVLQSDLYTLSSSVTVPSS-PRPSETVTCNVAHPASSTKVDKKI 216 (219)
T ss_dssp TTEEECCCEESSSCEEEEEEEEEESS-STTTSCCEEEEEEGGGTEEEEEEC
T ss_pred cceEecCCcccCCeEEEEEEEEEecc-cCCCCEEEEEEEeCCCCccEEEec
Confidence 421 111 13444222 235699999999999987655544
No 213
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.76 E-value=3.6e-18 Score=180.85 Aligned_cols=160 Identities=19% Similarity=0.217 Sum_probs=116.3
Q ss_pred eeeeecCCeEEEEEEEecCC--CCeEEEEEC--CEE---ee-------------cCCcEEEEEe-eCcEEEEEEccccCC
Q psy16863 757 SCQATVNEEFKFTVQVSISP--EPKVSWFRD--DQQ---VV-------------ESDNVKILKE-TLGVCHLKIHALEVA 815 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~--g~~---i~-------------~~~~~~~~~~-~~~~~~L~I~~~~~~ 815 (1075)
...+.+|++++|.|.+.|.| .+.|.|+|+ |.. +. ...++.+..+ ..+...|+|.+++.+
T Consensus 9 ~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (257)
T 1f3r_B 9 PGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTD 88 (257)
T ss_dssp CSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTT
T ss_pred CccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcc
Confidence 45688999999999999985 789999996 221 11 1356776554 245779999999999
Q ss_pred CCeEEEEEEEeCCc-------eEE--EEEEEEEEecCC----------CCCCeeeeecce-eecCCCeEEEEEEEEccCC
Q psy16863 816 DQAEWKCIATNDFG-------QSI--TSCFLKLNVPKH----------YKKPKFLEELKA-VLSEGGAVNLECKVIGVPQ 875 (1075)
Q Consensus 816 D~G~Y~C~A~N~~G-------~~~--~s~~l~V~~~~~----------~~~p~~~~~~~~-~~~~g~~~~L~C~v~g~p~ 875 (1075)
|+|.|+|.|.|..| ... ..+.|.|..++. ..++.+...+.. .+.+|++++|.|.+.+.|.
T Consensus 89 DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~ 168 (257)
T 1f3r_B 89 DTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNIN 168 (257)
T ss_dssp CCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCB
T ss_pred cCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCC
Confidence 99999999999865 111 235677765431 012223333333 3779999999999999999
Q ss_pred CeeEEEE--CCEEcC---------------------CCCeeEEEECCCCceeeEEEEEEEEeCC
Q psy16863 876 PTLKWFK--DGRELK---------------------AGDIHKIISGEDGTCCLGIYTCEAHNCM 916 (1075)
Q Consensus 876 p~v~W~k--~g~~l~---------------------~~~~~~i~~~~~~~~d~G~Y~C~a~N~~ 916 (1075)
+.|.||| +|..+. .+....|.+......|+|.|+|.|.|..
T Consensus 169 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 169 NYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred CcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 9999999 665431 0223467788888899999999999975
No 214
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.76 E-value=9.4e-18 Score=172.25 Aligned_cols=167 Identities=17% Similarity=0.224 Sum_probs=117.1
Q ss_pred CeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECC---EE--ee---------cCCcEEEEEeeCcEEEEEEccccC
Q psy16863 749 PKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDD---QQ--VV---------ESDNVKILKETLGVCHLKIHALEV 814 (1075)
Q Consensus 749 p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g---~~--i~---------~~~~~~~~~~~~~~~~L~I~~~~~ 814 (1075)
|.+...+....+.+|+++.|.|.+.+.|.+.+.|||.+ .+ +. ...++.+.. ..+...|.|.+++.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~ 80 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSG-SGRDSSFTISSLES 80 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEec-cCCEEEEEECCCCc
Confidence 34555566788999999999999999999999999832 11 11 245666653 44678999999999
Q ss_pred CCCeEEEEEEEeCCceEE-EEEEEEEEecCCCCCCeeeeecc-eeecCCCeEEEEEEEEccCCC--eeEEEECCEEcCCC
Q psy16863 815 ADQAEWKCIATNDFGQSI-TSCFLKLNVPKHYKKPKFLEELK-AVLSEGGAVNLECKVIGVPQP--TLKWFKDGRELKAG 890 (1075)
Q Consensus 815 ~D~G~Y~C~A~N~~G~~~-~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~p~p--~v~W~k~g~~l~~~ 890 (1075)
+|+|.|+|.|.|..|... ....|.|.. ...+|.+..... ..+..|+.++|.|.+.|.|++ .|+|+|||.++..+
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~--~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 158 (213)
T 3r06_A 81 EDIGSYYCQQYYNYPWTFGPGTKLEIKR--ADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDG 158 (213)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEECC--CCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred ccCEEEEEecccCCceEEcCCceEEEec--cCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCc
Confidence 999999999999865332 245566632 234555543322 234578899999999987653 89999999998754
Q ss_pred C--e----------e----EEEECCCCceeeEEEEEEEEeCCee
Q psy16863 891 D--I----------H----KIISGEDGTCCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 891 ~--~----------~----~i~~~~~~~~d~G~Y~C~a~N~~G~ 918 (1075)
. . + .+.+......|+|.|+|.|+|....
T Consensus 159 ~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 159 VLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred eEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 2 0 1 1122222234689999999998754
No 215
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.75 E-value=5.2e-18 Score=174.17 Aligned_cols=166 Identities=18% Similarity=0.300 Sum_probs=125.7
Q ss_pred eeeecCceeeccCCeEEEEEEEecCCCcEEEEEECC--Eec------------CCCCcEEEEEcCCEEEEEEcccCCCCc
Q psy16863 352 FIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRND--RKL------------EENKIYRTQHDGNFYFIDLSSVSLFDS 417 (1075)
Q Consensus 352 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g--~~l------------~~~~~~~~~~~g~~~~L~I~~v~~~d~ 417 (1075)
+...+..+.+.+|++++|.|.+.+.|.+.|.|||++ ..+ ....++.+..++....|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhC
Confidence 445567788999999999999999888899999854 221 112577777777778899999999999
Q ss_pred eeEEEEEEeCCCcee-eEEEEEeecCCCCCCCeeee-ecceEEecCCeEEEEEEEEC-CCCC-eEEEEeCCEeccCC---
Q psy16863 418 GRWTCLAENAVGRSH-CSCELSVLVPKAYKAPFFTK-ELEAILTEQGTVSLECKVMG-IPTP-QLIWYKDNKKIKAG--- 490 (1075)
Q Consensus 418 G~Y~C~a~n~~g~~~-~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~v~l~C~~~g-~p~~-~v~W~~~g~~l~~~--- 490 (1075)
|.|+|.|.|..|... ....|.|.... .+|.+.. .......+|+.+.|.|.+.| .|.+ .|+|+|+|+++..+
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~--~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~ 161 (213)
T 3d9a_L 84 GMYFCQQSNSWPYTFGGGTKLEIKRAD--AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLN 161 (213)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECCCC--BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEE
T ss_pred EEEEEeeecCCcceeCCCEEEEEecCC--CCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeee
Confidence 999999999877542 23467775432 2344443 22222347889999999987 6665 89999999988655
Q ss_pred ---------CE----EEEEeCCCCCCCcEEEEEEEEecceee
Q psy16863 491 ---------DI----FALTANPKDPSSLGTYTCEAVNCMGAA 519 (1075)
Q Consensus 491 ---------~~----~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 519 (1075)
.. ..|.|..+..+|+|.|+|.|.|.....
T Consensus 162 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 162 SWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred cCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 11 278888888999999999999987654
No 216
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.75 E-value=5.9e-18 Score=174.49 Aligned_cols=170 Identities=15% Similarity=0.297 Sum_probs=122.4
Q ss_pred eeeeecCceeeccCCeEEEEEEEecC-CCcEEEEEECC--Ee-------------c-C--CCCcEEEEEcCCEEEEEEcc
Q psy16863 351 AFIRRLHDIAVKVGTRARLLVEIRSP-TEIKIHWYRND--RK-------------L-E--ENKIYRTQHDGNFYFIDLSS 411 (1075)
Q Consensus 351 ~~~~~~~~~~v~~G~~v~l~C~~~g~-p~~~v~W~k~g--~~-------------l-~--~~~~~~~~~~g~~~~L~I~~ 411 (1075)
.+...+ .+.+.+|++++|.|.+.+. |.+.|.|||.+ .. . . ...++.+...+....|.|.+
T Consensus 3 ~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (218)
T 3s96_B 3 VLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISN 81 (218)
T ss_dssp SEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESS
T ss_pred eEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEcc
Confidence 344455 7789999999999999988 88999999932 10 0 0 11366666666777899999
Q ss_pred cCCCCceeEEEEEEeCCC-----ceeeEEEEEeecCCCCCCCeeee-ecceEEecCCeEEEEEEEEC-CCCC-eEEEEeC
Q psy16863 412 VSLFDSGRWTCLAENAVG-----RSHCSCELSVLVPKAYKAPFFTK-ELEAILTEQGTVSLECKVMG-IPTP-QLIWYKD 483 (1075)
Q Consensus 412 v~~~d~G~Y~C~a~n~~g-----~~~~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~v~l~C~~~g-~p~~-~v~W~~~ 483 (1075)
++.+|+|.|+|.|.|..| .......|.|...+. .+|.+.. ........|+.+.|.|.+.| .|.+ .|+|+|+
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~-~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~ 160 (218)
T 3s96_B 82 IQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPK-STPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKAN 160 (218)
T ss_dssp CCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCC-BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred CCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCC-CCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEEC
Confidence 999999999999999876 233456777775432 3344443 22233456789999999998 5777 8999999
Q ss_pred CEeccCC----------CEE----EEEeCCCCCCCcEEEEEEEEecceeeEEE
Q psy16863 484 NKKIKAG----------DIF----ALTANPKDPSSLGTYTCEAVNCMGAAFST 522 (1075)
Q Consensus 484 g~~l~~~----------~~~----~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 522 (1075)
|.++..+ ..+ .|.+......|+|.|+|.|.|..+....+
T Consensus 161 g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 161 GTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp TEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred CEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 9998652 112 26666666778999999999998866544
No 217
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.75 E-value=9.1e-18 Score=172.97 Aligned_cols=171 Identities=18% Similarity=0.178 Sum_probs=122.9
Q ss_pred ecCceeeccCCeEEEEEEEecCCCc---EEEEEECCEecCCCC------------------cEEEEE---cCCEEEEEEc
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSPTEI---KIHWYRNDRKLEENK------------------IYRTQH---DGNFYFIDLS 410 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~p~~---~v~W~k~g~~l~~~~------------------~~~~~~---~g~~~~L~I~ 410 (1075)
.+..+.+.+|++++|.|.+.+.|.+ .|+|+|++..+.... ++.... ......|.|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 4466789999999999999887755 589999886553221 111110 1112359999
Q ss_pred ccCCCCceeEEEEEEeCCCceeeE-EEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccC
Q psy16863 411 SVSLFDSGRWTCLAENAVGRSHCS-CELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKA 489 (1075)
Q Consensus 411 ~v~~~d~G~Y~C~a~n~~g~~~~s-~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~ 489 (1075)
+++.+|+|.|.|.+.|..+..... ..+.+..++ .+.........+.+|+.+.|.|.+.|.|+|.|+|++++..+..
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~ 161 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVLVPP---LPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTS 161 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCC---CCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEE
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEeeec---cceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCccccc
Confidence 999999999999999876655433 333333332 1222333333466788999999999999999999999987753
Q ss_pred CC----------EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEe
Q psy16863 490 GD----------IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIAR 528 (1075)
Q Consensus 490 ~~----------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~ 528 (1075)
.. ...|.|..+...|+|.|+|.|.|.+|.....+.+.|.
T Consensus 162 ~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 162 SRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred CceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 22 2368999999999999999999999987766665553
No 218
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.75 E-value=9.8e-18 Score=172.11 Aligned_cols=162 Identities=17% Similarity=0.262 Sum_probs=124.5
Q ss_pred CeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECC--Eec------------CCCCcEEEEEcCCEEEEEEcccCCC
Q psy16863 350 PAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRND--RKL------------EENKIYRTQHDGNFYFIDLSSVSLF 415 (1075)
Q Consensus 350 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g--~~l------------~~~~~~~~~~~g~~~~L~I~~v~~~ 415 (1075)
|.+...+..+.+.+|++++|.|.+.+.|.+.|.|||++ ..+ ....++.+...+....|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 44566677889999999999999999889999999953 111 1135777777777888999999999
Q ss_pred CceeEEEEEEeCCCc---eeeEEEEEeecCCCCCCCeeeee-cceEEecCCeEEEEEEEEC-CCCCeEEEEeCCEeccCC
Q psy16863 416 DSGRWTCLAENAVGR---SHCSCELSVLVPKAYKAPFFTKE-LEAILTEQGTVSLECKVMG-IPTPQLIWYKDNKKIKAG 490 (1075)
Q Consensus 416 d~G~Y~C~a~n~~g~---~~~s~~l~V~~~~~~~~p~~~~~-~~~~~~~g~~v~l~C~~~g-~p~~~v~W~~~g~~l~~~ 490 (1075)
|+|.|+|.|.|..+. ......|.|... ..+|.+... ....+.+|+.++|.|.+.| .|.+.|+|+|+|..+..+
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~--~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~ 159 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKGD--PVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTG 159 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEECC--CBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSS
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeCC--CcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCC
Confidence 999999999998763 334556777552 234555432 2223557999999999998 898999999999988642
Q ss_pred ------------CE----EEEEeCCCCCCCcEEEEEEEE
Q psy16863 491 ------------DI----FALTANPKDPSSLGTYTCEAV 513 (1075)
Q Consensus 491 ------------~~----~~l~i~~~~~~d~G~Y~C~a~ 513 (1075)
.. ..|.|.....+|+|.|+|.|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 160 IENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred eecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 12 247788888899999999999
No 219
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.75 E-value=1.5e-18 Score=173.30 Aligned_cols=146 Identities=19% Similarity=0.270 Sum_probs=109.3
Q ss_pred eeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcc-cCCCCceeEEEEEEeCCCceeeEEEEE
Q psy16863 360 AVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSS-VSLFDSGRWTCLAENAVGRSHCSCELS 438 (1075)
Q Consensus 360 ~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~-v~~~d~G~Y~C~a~n~~g~~~~s~~l~ 438 (1075)
...+|+++.|.|.+.+ ++ .|+|+|||..|..+. +. .|.|.+ ++.+|+|.|+|.|.|..|.......+.
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~-------~~--~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQKH-------DK--HLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSCC-------CS--EEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCCC-------CC--EEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 3467999999999977 43 499999999987641 11 589999 999999999999999998865555555
Q ss_pred eecCCCCC-------------CCee-----eeecc---eEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCC--CEEEE
Q psy16863 439 VLVPKAYK-------------APFF-----TKELE---AILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAG--DIFAL 495 (1075)
Q Consensus 439 V~~~~~~~-------------~p~~-----~~~~~---~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~--~~~~l 495 (1075)
|....... +|.+ ..... ..+.+|+++.|.|.+ |.|.|+|+|||.++... ....|
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~~~~~L 155 (186)
T 1jbj_A 79 VGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNATKNTW 155 (186)
T ss_dssp CCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSCCSSCC
T ss_pred EecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCCCcceE
Confidence 44322110 0000 00000 113489999999998 88899999999998743 34468
Q ss_pred EeCCCCCCCcEEEEEEEEecceee
Q psy16863 496 TANPKDPSSLGTYTCEAVNCMGAA 519 (1075)
Q Consensus 496 ~i~~~~~~d~G~Y~C~a~n~~g~~ 519 (1075)
.|..+..+|+|.|+|.|.|..|..
T Consensus 156 ~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 156 NLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp EEEETTSCCEEEEEEEESSCEEEE
T ss_pred EECCCCcCcCEEEEEEEEcCcCCc
Confidence 888999999999999999999876
No 220
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.75 E-value=9.7e-18 Score=174.43 Aligned_cols=176 Identities=12% Similarity=0.141 Sum_probs=128.4
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.+|.+...+.. .+.+|++++|.|.+.+ +...+.|||+|..+..... ..........|.|.+++.+|+|.|+|.+.|.
T Consensus 6 ~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 82 (242)
T 1p6f_A 6 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRVG 82 (242)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-SSCTTCCEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccc-cccCCcceeEEEecCCCcccCeEEEEEEecC
Confidence 46777666655 8999999999999864 4579999999987641100 0011234457999999999999999999887
Q ss_pred CCcee--eEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEecc-----CCCEEEEEeCCC
Q psy16863 428 VGRSH--CSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIK-----AGDIFALTANPK 500 (1075)
Q Consensus 428 ~g~~~--~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~-----~~~~~~l~i~~~ 500 (1075)
.+... ....|.|... +.+|.+...+...+.+|++++|.|.+.+. .+.|.|+|+|..+. ......|.|..+
T Consensus 83 ~~~s~~S~~~~L~V~~~--~~~P~i~~~p~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~v 159 (242)
T 1p6f_A 83 ELWSEPSNLLDLVVTEM--YDTPTLSVHPGPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQRGYGKVQAEFPLGPV 159 (242)
T ss_dssp TEECCCCCCEEEEEECC--SCCCEEEEESCSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEEEEECSSEEEEEEEEC
T ss_pred CccccCCcceEEEeecc--cCCCceEccCCCccCCCCcEEEEEecCCC-CCEEEEEECCCccCccccCCCceEEEEeCCC
Confidence 55433 3455555532 33566665555668899999999998764 46999999998764 345668999999
Q ss_pred CCCCcEEEEEEEEecc-e--eeEEEEEEEEec
Q psy16863 501 DPSSLGTYTCEAVNCM-G--AAFSTSRVIARG 529 (1075)
Q Consensus 501 ~~~d~G~Y~C~a~n~~-g--~~~~~~~v~v~~ 529 (1075)
..+|+|.|+|.|.|.. . ..+....|.|.+
T Consensus 160 ~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~ 191 (242)
T 1p6f_A 160 TTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTG 191 (242)
T ss_dssp CGGGCEEEEEEEEEETTEECCCCCCEEEEEEC
T ss_pred ccccCEEEEEEEECCCCcccCCCCCEEEEEec
Confidence 9999999999999974 1 233445666664
No 221
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.75 E-value=1.1e-18 Score=178.98 Aligned_cols=162 Identities=18% Similarity=0.226 Sum_probs=113.8
Q ss_pred cceeeeecCCeEEEEEEEecCCCCeEEEEEC--CEEee------------cCCcEEEEEeeCcEEEEEEccccCCCCeEE
Q psy16863 755 LKSCQATVNEEFKFTVQVSISPEPKVSWFRD--DQQVV------------ESDNVKILKETLGVCHLKIHALEVADQAEW 820 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~--g~~i~------------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 820 (1075)
+....+.+|++++|.|.+.+.|.+.|.|||+ |..+. ...++.+.. ..+...|.|.+++.+|+|.|
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y 84 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGST-SGTTATLTISGAQPEDEAAY 84 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEETTCCGGGCSEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEe-eCCEEEEEECcCCcccCEEE
Confidence 4556789999999999999888889999985 33331 135666654 44577999999999999999
Q ss_pred EEEEEeCCc-eEE--EEEEEEEEecCCCCCCeeeee-cceeecCCCeEEEEEEEEcc-CC-CeeEEEECCEEcCCCCe--
Q psy16863 821 KCIATNDFG-QSI--TSCFLKLNVPKHYKKPKFLEE-LKAVLSEGGAVNLECKVIGV-PQ-PTLKWFKDGRELKAGDI-- 892 (1075)
Q Consensus 821 ~C~A~N~~G-~~~--~s~~l~V~~~~~~~~p~~~~~-~~~~~~~g~~~~L~C~v~g~-p~-p~v~W~k~g~~l~~~~~-- 892 (1075)
+|.|.|..+ ... ....|.|...+. .+|.+... ....+.+|+.++|.|.+.|. |+ |.|+|+|||.++..+..
T Consensus 85 ~C~~~n~~~~~~~~~~~~~l~V~~~~~-~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~ 163 (212)
T 1nfd_E 85 YCLSSYGDNNDLVFGSGTQLTVLRGPK-SSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTT 163 (212)
T ss_dssp EEEEEETTTTEEEECCCEEEEEECCCC-BCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCC
T ss_pred EEEEEcccCcccccCCceEEEEccCCC-CCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecC
Confidence 999998322 221 234566643221 34444321 11224578999999999988 54 79999999999875422
Q ss_pred --------eE----EEECCCCceeeEEEEEEEEeCCee
Q psy16863 893 --------HK----IISGEDGTCCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 893 --------~~----i~~~~~~~~d~G~Y~C~a~N~~G~ 918 (1075)
+. |.+......|+|.|+|.|.|..+.
T Consensus 164 ~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 164 KPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp CCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred CceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 11 333333446799999999998876
No 222
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.75 E-value=4.2e-17 Score=169.06 Aligned_cols=186 Identities=15% Similarity=0.118 Sum_probs=122.0
Q ss_pred ccceeeccceeEEEEEecCCCc---eEEEEe-cCCCeeeEEecCCCcccc------CCCeEEEe---eCCeEEEEEcccC
Q psy16863 250 HDIAVKVGTRARLLVEIRSPTE---IKCQFD-LNNTIPFSFRAQGDHPIF------GNRFRAIN---RDGRTELNIRRVR 316 (1075)
Q Consensus 250 ~~~~v~~g~~~~l~c~~~~~~~---~~c~~~-~~~~~~~~w~~~~~~~~~------~~~~~~~~---~~~~~~L~I~~~~ 316 (1075)
..+.+.+|+.++|.|.+.+.+. +...|. .+....+.|+.++..... ..+..... ..+..+|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 3467889999999999875332 223332 223333444444332221 12233322 2346789999999
Q ss_pred CCCCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEec-CCCcEEEEEECCEecCCC-C
Q psy16863 317 RDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRS-PTEIKIHWYRNDRKLEEN-K 394 (1075)
Q Consensus 317 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g-~p~~~v~W~k~g~~l~~~-~ 394 (1075)
.+|+|.|+|.|.|..|.....+.+.+.. .+........+.+|+.+.|.|.+.| .|.|.|+|+|++..+... .
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~------~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~ 165 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAA------LGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVE 165 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEB------CCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEE
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeecc------ceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCc
Confidence 9999999999999988877666665543 1222234457789999999999987 589999999976544333 2
Q ss_pred c-EEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeec
Q psy16863 395 I-YRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLV 441 (1075)
Q Consensus 395 ~-~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~ 441 (1075)
. +....+|....+.+..++.+|+|.|+|.|+|..|..++++.|.|..
T Consensus 166 ~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~e 213 (226)
T 4f80_A 166 APVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIAD 213 (226)
T ss_dssp CCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCT
T ss_pred eEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECC
Confidence 2 2222344455566667889999999999999999998888887754
No 223
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.75 E-value=4.6e-19 Score=183.45 Aligned_cols=175 Identities=17% Similarity=0.280 Sum_probs=118.7
Q ss_pred eeeecCCeEEEEEEEecCCC-----CeEEEEECCEEee-------------cCCcEEEEEe--eCcEEEEEEccccCCCC
Q psy16863 758 CQATVNEEFKFTVQVSISPE-----PKVSWFRDDQQVV-------------ESDNVKILKE--TLGVCHLKIHALEVADQ 817 (1075)
Q Consensus 758 ~~~~~g~~~~l~C~v~g~p~-----p~v~W~k~g~~i~-------------~~~~~~~~~~--~~~~~~L~I~~~~~~D~ 817 (1075)
+.+.+|+++.|.|.+.+.|. +.+.|+|++.... ...++.+... ..+...|.|.+++.+|+
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~ 84 (222)
T 4i0k_A 5 VVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDE 84 (222)
T ss_dssp CCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGC
T ss_pred EEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccC
Confidence 45789999999999998764 7899999874321 1122222110 11245799999999999
Q ss_pred eEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEE-EccCCCeeEEEE-CCEEcCCCCe---
Q psy16863 818 AEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKV-IGVPQPTLKWFK-DGRELKAGDI--- 892 (1075)
Q Consensus 818 G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v-~g~p~p~v~W~k-~g~~l~~~~~--- 892 (1075)
|.|+|.|.|. +.....+.|.|..++ .+|.+.......+.+|+.++|.|.+ .|.|.|.|+|++ +|..+.....
T Consensus 85 G~Y~C~~~~~-~~~~~~~~l~V~~~~--~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~ 161 (222)
T 4i0k_A 85 GSYTCFVSIQ-DFDSAAVSLQVAAPY--SKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQ 161 (222)
T ss_dssp SCEEEEEEEC-CCCCCCCCCCCCBCC--CCCEEECCC-----CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEE
T ss_pred EEEEEEEEeC-CCceEEEEEEEEcCC--CCCcEEeCCCceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeE
Confidence 9999999996 444445566665432 3455544444456789999999999 899999999999 5665543211
Q ss_pred --------eEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEecCChhhh
Q psy16863 893 --------HKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFEDKSQIE 935 (1075)
Q Consensus 893 --------~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~~~ 935 (1075)
..+.+......|+|.|+|.|.|.+|....++.|.|.++|..+.
T Consensus 162 ~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 212 (222)
T 4i0k_A 162 MANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTFP 212 (222)
T ss_dssp EECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC------
T ss_pred EcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCccccC
Confidence 1123333445689999999999999999999999987665443
No 224
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.75 E-value=1e-17 Score=175.36 Aligned_cols=172 Identities=13% Similarity=0.196 Sum_probs=121.3
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECC--EE---e---------ecCCcEEEEEeeCcEEEEEEcccc
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDD--QQ---V---------VESDNVKILKETLGVCHLKIHALE 813 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g--~~---i---------~~~~~~~~~~~~~~~~~L~I~~~~ 813 (1075)
.+.+...+....+.+|+++.|.|.+.+.|.+.+.|+|++ .. + ....++.+. ...+...|.|.+++
T Consensus 24 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~L~I~~v~ 102 (237)
T 3sob_L 24 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGS-GSGTDFTLTISSLQ 102 (237)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-EETTEEEEEESSCC
T ss_pred cceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEE-cCCCEEEEEECCCC
Confidence 445666677788999999999999999999999999942 11 1 123566665 34467899999999
Q ss_pred CCCCeEEEEEEEeCCceEE-EEEEEEEEecCCCCCCeeeeecc-eeecCCCeEEEEEEEEcc-C-CCeeEEEECCEEcCC
Q psy16863 814 VADQAEWKCIATNDFGQSI-TSCFLKLNVPKHYKKPKFLEELK-AVLSEGGAVNLECKVIGV-P-QPTLKWFKDGRELKA 889 (1075)
Q Consensus 814 ~~D~G~Y~C~A~N~~G~~~-~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~-p-~p~v~W~k~g~~l~~ 889 (1075)
.+|+|.|+|.|.|..|... ....|.|.. ...+|.+..... ..+.+|+.++|.|.+.|. | .|.|+|+|||.++..
T Consensus 103 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~--~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~ 180 (237)
T 3sob_L 103 PEDFATYYCQQSYTTPPTFGQGTKVEIKR--TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSG 180 (237)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEEC--CCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCS
T ss_pred hhhCeEEEEeeccCCceEEcCcEEEEEec--CCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCC
Confidence 9999999999999876322 234666654 234555543222 223468899999999985 4 489999999999875
Q ss_pred CC------------e----eEEEECCCCceeeEEEEEEEEeCCeeEEEE
Q psy16863 890 GD------------I----HKIISGEDGTCCLGIYTCEAHNCMGTTSSS 922 (1075)
Q Consensus 890 ~~------------~----~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~ 922 (1075)
+. . ..+.+......|.|.|+|.|.|........
T Consensus 181 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 229 (237)
T 3sob_L 181 NSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVT 229 (237)
T ss_dssp SEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEE
T ss_pred ceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCcee
Confidence 31 1 112233333356899999999998654433
No 225
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.74 E-value=2.8e-18 Score=179.88 Aligned_cols=178 Identities=10% Similarity=0.105 Sum_probs=120.6
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+.................|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 83 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV 83 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEEC
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEec
Confidence 4677765554 66889999999999984 678999999997653211000000011245799999999999999999997
Q ss_pred CCc-----eEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCC----------C
Q psy16863 827 DFG-----QSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAG----------D 891 (1075)
Q Consensus 827 ~~G-----~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~----------~ 891 (1075)
..+ ..+..+.|.|.. .+.+|.+.......+.+|+.++|.|.+.+. .+.|.|+|||..+... .
T Consensus 84 ~~~~~~~s~~S~~~~L~V~~--~~~~P~l~~~p~~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~ 160 (257)
T 1b6u_A 84 THSPYQLSAPSDPLDIVITG--LYEKPSLSAQPGPTVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGPKVNGTF 160 (257)
T ss_dssp SSCTTSCCCCCCCEEEEEEC--SSCCCEEECSSCTTCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBCCSSSCC
T ss_pred cCCCccccccCCCEEEeccc--CCCCcceEccCCCccCCCCEEEEEEeCCCC-CcEEEEEECCcccCcccccccccCCce
Confidence 532 123345566654 234566554444457899999999999775 4789999999876421 2
Q ss_pred eeEEEECCCCceeeEEEEEEEEeCCe-----eEEEEEEEEEecCC
Q psy16863 892 IHKIISGEDGTCCLGIYTCEAHNCMG-----TTSSSAALLGFEDK 931 (1075)
Q Consensus 892 ~~~i~~~~~~~~d~G~Y~C~a~N~~G-----~~~~~~~l~v~~~~ 931 (1075)
...+.+.... |+|.|+|.|.|..+ ..+..+.|.|..++
T Consensus 161 ~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p 203 (257)
T 1b6u_A 161 QADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNP 203 (257)
T ss_dssp BEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC
T ss_pred eEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccC
Confidence 3455555554 89999999998632 22334566666543
No 226
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.74 E-value=9.2e-18 Score=176.68 Aligned_cols=169 Identities=14% Similarity=0.152 Sum_probs=118.6
Q ss_pred EEeccceeeeecCCeEEEEEEEecCCCCeEEEEE----------------CCEEeecC---CcEEEEEeeCcEEEEEEcc
Q psy16863 751 FIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFR----------------DDQQVVES---DNVKILKETLGVCHLKIHA 811 (1075)
Q Consensus 751 ~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k----------------~g~~i~~~---~~~~~~~~~~~~~~L~I~~ 811 (1075)
+...+..+.+.+|+++.|.|.+.+.|.+.|.||| ++..+... .++.+.....+.+.|.|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 83 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTS 83 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECS
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECC
Confidence 4445566789999999999999999999999999 44434332 5777766556688999999
Q ss_pred ccCCCCeEEEEEEEeCCc----eEEEEEEEEEEecC-CCCCCeee-eecc-eeecCCCeEEEEEEEEccCCC--eeEEEE
Q psy16863 812 LEVADQAEWKCIATNDFG----QSITSCFLKLNVPK-HYKKPKFL-EELK-AVLSEGGAVNLECKVIGVPQP--TLKWFK 882 (1075)
Q Consensus 812 ~~~~D~G~Y~C~A~N~~G----~~~~s~~l~V~~~~-~~~~p~~~-~~~~-~~~~~g~~~~L~C~v~g~p~p--~v~W~k 882 (1075)
++.+|+|.|.|.|.|..+ .......|.|.... ...+|.+. ..+. ..+.+|+.++|.|.+.|.|++ .|+|+|
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k 163 (246)
T 4dzb_B 84 AHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 163 (246)
T ss_dssp CCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEE
Confidence 999999999999998754 12234466666411 12234432 2222 124569999999999998765 899999
Q ss_pred CCEEcCCC----------------CeeE----EEECCCCcee-eEEEEEEEEeCCeeE
Q psy16863 883 DGRELKAG----------------DIHK----IISGEDGTCC-LGIYTCEAHNCMGTT 919 (1075)
Q Consensus 883 ~g~~l~~~----------------~~~~----i~~~~~~~~d-~G~Y~C~a~N~~G~~ 919 (1075)
||.+|..+ ..+. +.+......| .|.|+|.|.|.....
T Consensus 164 ~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~ 221 (246)
T 4dzb_B 164 NGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 221 (246)
T ss_dssp TTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred CCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCC
Confidence 99998653 2222 2222222345 899999999976543
No 227
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.74 E-value=1.5e-17 Score=168.71 Aligned_cols=162 Identities=11% Similarity=0.089 Sum_probs=118.3
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEE-EEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYR-TQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~-~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
.+|.|...+. ..+.+|++++|.|.+. .+.+.|.|||+|..+....... .........|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~ 84 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSV 84 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEB
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEecc-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEec
Confidence 4677665554 7789999999999996 4678999999998664321110 11122335699999999999999999987
Q ss_pred CCC-----ceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCC----------C
Q psy16863 427 AVG-----RSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAG----------D 491 (1075)
Q Consensus 427 ~~g-----~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~----------~ 491 (1075)
..+ ..+....|.|... ..+|.+...+...+.+|+.++|.|.+.+ |.+.|.|+|+|..+... .
T Consensus 85 ~~~~~~~~~~s~~~~l~V~~~--~~~p~i~~~p~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~ 161 (201)
T 1nkr_A 85 THSPYQVSAPSDPLDIVIIGL--YEKPSLSAQPGPTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTF 161 (201)
T ss_dssp TTBTTCCCCCCCCEEEEEECS--SCCCEEEEESCSEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEE
T ss_pred CCCCccccCCCCCEEEEeecc--CCCCceecCCCCccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCce
Confidence 532 2234456666653 2456666555556889999999999886 66899999999876531 1
Q ss_pred EEEEEeCCCCCCCcEEEEEEEEecc
Q psy16863 492 IFALTANPKDPSSLGTYTCEAVNCM 516 (1075)
Q Consensus 492 ~~~l~i~~~~~~d~G~Y~C~a~n~~ 516 (1075)
...|.|.++. |+|.|+|.|.+..
T Consensus 162 ~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 162 QADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEEEEEECC--SCEEEEEEEEETT
T ss_pred EEEEEeCCcC--CCeeEEEEEEcCC
Confidence 4578888887 9999999999753
No 228
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.74 E-value=2.7e-17 Score=168.15 Aligned_cols=167 Identities=16% Similarity=0.240 Sum_probs=128.4
Q ss_pred eEEecCCeEEEEEEEECCCCCeEEEEeCCEeccC-------------------CCE------EEEEeCCCCCCCcEEEEE
Q psy16863 456 AILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKA-------------------GDI------FALTANPKDPSSLGTYTC 510 (1075)
Q Consensus 456 ~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~-------------------~~~------~~l~i~~~~~~d~G~Y~C 510 (1075)
..+.+|+.+.|.|...+.|.+.+.|++++..... ..+ ..|.|.++..+|+|.|+|
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C 88 (208)
T 3r4d_A 9 PQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTL 88 (208)
T ss_dssp SEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEEE
T ss_pred ceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEEE
Confidence 3477999999999988888889999997542211 111 258899999999999999
Q ss_pred EEEecc-eeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEeCC
Q psy16863 511 EAVNCM-GAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKE 589 (1075)
Q Consensus 511 ~a~n~~-g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~ 589 (1075)
.+.|.. +.......|.|... ...|.+...... +.+|+.++|.|.+.+.| | .+.|++++
T Consensus 89 ~~~~~~~~~~~~~~~l~V~~~-----------------~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p-~i~W~~~g 147 (208)
T 3r4d_A 89 DMTDENYRRTQATVRFHVHQP-----------------VTQPFLQVTNTT--VKELDSVTLTCLSNDIG-A-NIQWLFNS 147 (208)
T ss_dssp EEECSSCEEEEEEEEEEEECC-----------------CCCCEEEESCSS--CCTTCCEEEEEECSCTT-C-EEEEEETT
T ss_pred EEEcccCceeEEEEEEEeccC-----------------CCCCEEecCCce--EeeCCCEEEEEECCCCC-C-ceEEEECC
Confidence 999984 66666677777631 122444433333 88999999999999876 6 89999999
Q ss_pred eEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEEEeCC
Q psy16863 590 GVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVHVLMP 646 (1075)
Q Consensus 590 ~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~p 646 (1075)
..+..+.++.+..++ ..|.|.++..+|+|.|+|.|.|..|........+.|..|
T Consensus 148 ~~l~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~ 201 (208)
T 3r4d_A 148 QSLQLTERMTLSQNN---SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFD 201 (208)
T ss_dssp EECCCCSSEEEETTT---TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC--
T ss_pred EeCCCCCCeEEcCCC---CEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeC
Confidence 999877777766543 389999999999999999999999998766656655554
No 229
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.74 E-value=6.7e-18 Score=149.98 Aligned_cols=97 Identities=20% Similarity=0.283 Sum_probs=88.2
Q ss_pred CCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 746 NKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 746 ~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
..||.|+..++++.+.+|+++.|.|.+.|.|.|.|+|+|||++|..+.++.+..+ .+.+.|.|.+++.+|+|.|+|.|.
T Consensus 11 ~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~ 89 (107)
T 3knb_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPAD-GAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEE-TTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeec-CceEEEEEecCChhhCEEEEEEEE
Confidence 3689999999999999999999999999999999999999999999998887654 457799999999999999999999
Q ss_pred eCCceEEEEEEEEEEecC
Q psy16863 826 NDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~ 843 (1075)
|.+|.+.+++.|.|..||
T Consensus 90 N~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 90 NAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp ETTEEEEEEEEEEEEC--
T ss_pred ECCCEEEEEEEEEEEcCC
Confidence 999999999999998753
No 230
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.74 E-value=2.1e-17 Score=169.39 Aligned_cols=167 Identities=13% Similarity=0.137 Sum_probs=121.2
Q ss_pred eeeecCceeeccCCeEEEEEEEecCC---CcEEEEEECC--Eec------------CCCCcEEEEEcCCEEEEEEcccCC
Q psy16863 352 FIRRLHDIAVKVGTRARLLVEIRSPT---EIKIHWYRND--RKL------------EENKIYRTQHDGNFYFIDLSSVSL 414 (1075)
Q Consensus 352 ~~~~~~~~~v~~G~~v~l~C~~~g~p---~~~v~W~k~g--~~l------------~~~~~~~~~~~g~~~~L~I~~v~~ 414 (1075)
+.. +..+.+.+|++++|.|.+.+.| .+.|.|||++ ..+ ....++.+...+....|.|.+++.
T Consensus 4 v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 82 (212)
T 1q0x_L 4 VTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQT 82 (212)
T ss_dssp EEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCc
Confidence 344 6778899999999999998876 4799999963 222 123566666667777899999999
Q ss_pred CCceeEEEEEEeCCCce-eeEEEEEeecCCCCCCCeeeeec-ceEEecCCeEEEEEEEECCC-CC-eEEEEeCCEeccCC
Q psy16863 415 FDSGRWTCLAENAVGRS-HCSCELSVLVPKAYKAPFFTKEL-EAILTEQGTVSLECKVMGIP-TP-QLIWYKDNKKIKAG 490 (1075)
Q Consensus 415 ~d~G~Y~C~a~n~~g~~-~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~v~l~C~~~g~p-~~-~v~W~~~g~~l~~~ 490 (1075)
+|+|.|.|.|.|..+.. .....|.|...+. .+|.+.... .....+|+.++|.|.+.|.+ ++ .|+|+|||+++..+
T Consensus 83 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~-~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~ 161 (212)
T 1q0x_L 83 EDEAIYFCALWSNNKLVFGGGTKLTVLGQPK-SSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAG 161 (212)
T ss_dssp GGCEEEEEEEECSSCEEECCCEEEEECCSCC-BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred cCCEEEEEEEecCchhhcCCCeEEEEecCCC-CCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCC
Confidence 99999999999987642 2334566643321 244544322 22244688999999999854 43 89999999988543
Q ss_pred C---------------EEEEEeCCCCCCCcEEEEEEEEecceeeE
Q psy16863 491 D---------------IFALTANPKDPSSLGTYTCEAVNCMGAAF 520 (1075)
Q Consensus 491 ~---------------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 520 (1075)
. ...|.|.....+|+|.|+|.|.|......
T Consensus 162 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (212)
T 1q0x_L 162 METTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSN 206 (212)
T ss_dssp EEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEE
T ss_pred eecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCccee
Confidence 1 12467777778899999999999876543
No 231
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.74 E-value=9.2e-18 Score=172.46 Aligned_cols=168 Identities=17% Similarity=0.202 Sum_probs=116.1
Q ss_pred cceeeeecCCeEEEEEEEecC-------CCCeEEEEECCEE------ee-----------cCCcEEEEEe-eCcEEEEEE
Q psy16863 755 LKSCQATVNEEFKFTVQVSIS-------PEPKVSWFRDDQQ------VV-----------ESDNVKILKE-TLGVCHLKI 809 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g~-------p~p~v~W~k~g~~------i~-----------~~~~~~~~~~-~~~~~~L~I 809 (1075)
+..+.+.+|+++.|.|.+.+. +.+.+.|+|++.. +. ...++.+..+ ..+.+.|.|
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 86 (214)
T 2zg1_A 7 QKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSI 86 (214)
T ss_dssp CSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEE
T ss_pred CcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEE
Confidence 456778999999999999864 5789999998752 11 1235554322 123457999
Q ss_pred ccccCCCCeEEEEEEEeCCceEE----EEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEcc----CCCeeEEE
Q psy16863 810 HALEVADQAEWKCIATNDFGQSI----TSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGV----PQPTLKWF 881 (1075)
Q Consensus 810 ~~~~~~D~G~Y~C~A~N~~G~~~----~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~----p~p~v~W~ 881 (1075)
.+++.+|+|.|.|.|.|..+... ..+.|.|..++ .+|.+..+. .+.+|+.++|.|.+.|. |.|.|+|+
T Consensus 87 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~--~~p~i~~~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~ 162 (214)
T 2zg1_A 87 GDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALI--EKPDIHFLE--PLESGRPTRLSCSLPGSCEAGPPLTFSWT 162 (214)
T ss_dssp CSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCC--CCCEEC--C--CCCTTCCEEEEEECTTCCSCSSCCEEEEE
T ss_pred ccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCC--CCCceecCc--cccCCCeEEEEEEeccCCCCCCCceEEEe
Confidence 99999999999999999874432 25667776543 244443221 26689999999999874 88999999
Q ss_pred ECCEEcCC---CCeeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEE
Q psy16863 882 KDGRELKA---GDIHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALL 926 (1075)
Q Consensus 882 k~g~~l~~---~~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~ 926 (1075)
|+|..+.. .....|.+......|.|.|+|.|.|..|..+.++.+.
T Consensus 163 ~~~~~~~~~~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 163 GNALSPLDPETTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp SSTTSSSCSSCCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred CCCCccCCCCceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 99876432 1234566666667789999999999876654444443
No 232
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.74 E-value=5.8e-18 Score=176.40 Aligned_cols=156 Identities=15% Similarity=0.312 Sum_probs=119.1
Q ss_pred ecCceeeccCCeEEEEEEEecCCC-cEEEEEECCEecC---------C----CCcEE----------EEEcCCEEEEEEc
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSPTE-IKIHWYRNDRKLE---------E----NKIYR----------TQHDGNFYFIDLS 410 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~p~-~~v~W~k~g~~l~---------~----~~~~~----------~~~~g~~~~L~I~ 410 (1075)
.+.++.+.+|+++.|.|.+.+.+. +.+.|+|++.... . ..++. +..++. |.|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~---L~i~ 82 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGR---LVLA 82 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCC---EEES
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCce---EEEc
Confidence 456678999999999999988885 8999998764322 1 11222 222233 8999
Q ss_pred ccCCCCceeEEEEEEeCC-CceeeEEEEEeecCCCCCCCeeeeecceE-EecCCeE-EEEEEE-ECCCCCeEEEEeCCEe
Q psy16863 411 SVSLFDSGRWTCLAENAV-GRSHCSCELSVLVPKAYKAPFFTKELEAI-LTEQGTV-SLECKV-MGIPTPQLIWYKDNKK 486 (1075)
Q Consensus 411 ~v~~~d~G~Y~C~a~n~~-g~~~~s~~l~V~~~~~~~~p~~~~~~~~~-~~~g~~v-~l~C~~-~g~p~~~v~W~~~g~~ 486 (1075)
+++.+|+|.|+|.|.|.. |.....+.|.|..+|.. |.+....... +.+|+.+ .|.|.+ .|.|.+.++|+|+|.+
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~--~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~ 160 (231)
T 2pet_A 83 EAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEA--TEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQR 160 (231)
T ss_dssp SCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCC--CEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEE
T ss_pred ccCcccCceEEEEEEecCCCceEEEEEEEEEecCCC--cEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCcc
Confidence 999999999999999987 77778888888877642 4555443332 5688887 999999 8999999999999999
Q ss_pred ccCCC----E------------------EEEEeCCCCCCCcEEEEEEEEec
Q psy16863 487 IKAGD----I------------------FALTANPKDPSSLGTYTCEAVNC 515 (1075)
Q Consensus 487 l~~~~----~------------------~~l~i~~~~~~d~G~Y~C~a~n~ 515 (1075)
+.... + ..|.+.....+|+|.|+|.|.|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 161 LEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp CCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred CccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 87654 1 34677666666799999999993
No 233
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.74 E-value=1.5e-17 Score=173.99 Aligned_cols=165 Identities=11% Similarity=0.142 Sum_probs=113.8
Q ss_pred EEeccceeeeecCCeEEEEEEEecCCCCeEEEEEC--CEEe---------------ecCCcEEEEEeeCcEEEEEEcccc
Q psy16863 751 FIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRD--DQQV---------------VESDNVKILKETLGVCHLKIHALE 813 (1075)
Q Consensus 751 ~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~--g~~i---------------~~~~~~~~~~~~~~~~~L~I~~~~ 813 (1075)
+...+....+.+|++++|.|. .+.|.+.|.|+|+ +..+ ....++.+.....+...|.|.+++
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 344456678999999999999 7789999999995 2211 013456654433345689999999
Q ss_pred CCCCeEEEEEEEeCCceEE-----EEEEEEEEecCCCC-------CCeeeeecce-eecCCCeEEEEEEEEccCCCeeEE
Q psy16863 814 VADQAEWKCIATNDFGQSI-----TSCFLKLNVPKHYK-------KPKFLEELKA-VLSEGGAVNLECKVIGVPQPTLKW 880 (1075)
Q Consensus 814 ~~D~G~Y~C~A~N~~G~~~-----~s~~l~V~~~~~~~-------~p~~~~~~~~-~~~~g~~~~L~C~v~g~p~p~v~W 880 (1075)
.+|+|.|+|.|.|..|... ....|.|..++... .+.+...+.. .+.+|++++|.|.+.|.|.|.+.|
T Consensus 82 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W 161 (238)
T 2p1y_A 82 PSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPW 161 (238)
T ss_dssp GGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEE
T ss_pred cccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEE
Confidence 9999999999999876311 23466666432100 0133333333 477999999999999999999999
Q ss_pred EECC--E---Ec--------------------CCCCeeEEEECCCCceeeEEEEEEEEeCC
Q psy16863 881 FKDG--R---EL--------------------KAGDIHKIISGEDGTCCLGIYTCEAHNCM 916 (1075)
Q Consensus 881 ~k~g--~---~l--------------------~~~~~~~i~~~~~~~~d~G~Y~C~a~N~~ 916 (1075)
||++ . .+ ..+....|.+......|+|.|+|.|.|..
T Consensus 162 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 162 YQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 9963 1 11 01223467788888899999999999984
No 234
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.74 E-value=7.7e-18 Score=179.95 Aligned_cols=194 Identities=13% Similarity=0.090 Sum_probs=122.6
Q ss_pred CeeeeecCceeeccCCeEEEEEEEe---cCCCcEEEEEECCEecCCC------------------CcEEEEE--cCCEEE
Q psy16863 350 PAFIRRLHDIAVKVGTRARLLVEIR---SPTEIKIHWYRNDRKLEEN------------------KIYRTQH--DGNFYF 406 (1075)
Q Consensus 350 p~~~~~~~~~~v~~G~~v~l~C~~~---g~p~~~v~W~k~g~~l~~~------------------~~~~~~~--~g~~~~ 406 (1075)
+.+...+..+.+.+|++++|.|.+. +.+.+.|.|+|++...... .++.+.. ......
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 3444455678899999999999997 6777899999976543222 2222211 011145
Q ss_pred EEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEE---ECCCCCeEEEEeC
Q psy16863 407 IDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKV---MGIPTPQLIWYKD 483 (1075)
Q Consensus 407 L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~---~g~p~~~v~W~~~ 483 (1075)
|.|.+++.+|+|.|+|.|.|..+....+..+.+.+.+. .| ....+.+|+.+.|.|.+ .+.|.+.++|+++
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~--~p-----~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~ 158 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPE--EP-----RDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFS 158 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECC--CC-----SEEEEETTCCEEECCBCEESSSSCCCEEEEEEE
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEecc--CC-----CccccccCCcEEEEEEecCCCCCCccceEEEec
Confidence 99999999999999999999876654455555544322 11 12347899999999999 5779999999994
Q ss_pred -CEecc--------------------------------CCCEEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEecc
Q psy16863 484 -NKKIK--------------------------------AGDIFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQ 530 (1075)
Q Consensus 484 -g~~l~--------------------------------~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~ 530 (1075)
+..+. ......|.|..+..+|+|.|+|.|.|..|....++.|.|..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~- 237 (268)
T 3mj6_A 159 SGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQ- 237 (268)
T ss_dssp CTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC-
T ss_pred CCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEc-
Confidence 32110 02244789999999999999999999999998888888852
Q ss_pred ccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEE
Q psy16863 531 QSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAI 569 (1075)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~ 569 (1075)
.+|.+...+.+..+.+|+.+.
T Consensus 238 ------------------~~p~~~~~p~~~~~~~~q~~~ 258 (268)
T 3mj6_A 238 ------------------DEFQRTISPTPPTDKGQQGIL 258 (268)
T ss_dssp ------------------C--------------------
T ss_pred ------------------CCCeeeeCCCCCCCCcceecc
Confidence 234444455666666666543
No 235
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.74 E-value=6.2e-18 Score=167.26 Aligned_cols=155 Identities=15% Similarity=0.217 Sum_probs=111.8
Q ss_pred ceeeeecCCeEEEEEEEec-CCCCeEEEEEC-CEEee------------cC--CcEEEEEeeCcEEEEEEccccCCCCeE
Q psy16863 756 KSCQATVNEEFKFTVQVSI-SPEPKVSWFRD-DQQVV------------ES--DNVKILKETLGVCHLKIHALEVADQAE 819 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g-~p~p~v~W~k~-g~~i~------------~~--~~~~~~~~~~~~~~L~I~~~~~~D~G~ 819 (1075)
..+.+.+|++++|.|.+.+ .+.+.|.|+|+ +..+. .. .|+.+. .+...|.|.+++.+|+|.
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~---~~~~sL~I~~v~~~D~G~ 83 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLD---KTNGALRIYNVSKEDRGD 83 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEEC---TTTCCEEECSCCGGGCEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEe---CCCccEEEcCCCHHHCeE
Confidence 3467899999999999864 34789999994 43332 11 344431 123479999999999999
Q ss_pred EEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCCeeEEEECCEEcCCCCeeEEEECC
Q psy16863 820 WKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQPTLKWFKDGRELKAGDIHKIISGE 899 (1075)
Q Consensus 820 Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p~v~W~k~g~~l~~~~~~~i~~~~ 899 (1075)
|+|.+.+.. .....+.|.|..+. ..|.+.. .+..++|.|.+.+.|.|.|+|+|||..|.......|.+..
T Consensus 84 Y~C~v~~~~-~~~~~~~L~V~~~~--~~P~i~~-------~~~~v~L~C~~~~gp~p~i~W~~~~~~l~~~~~~~l~~~~ 153 (180)
T 2dru_A 84 YYMRMLHET-EDQWKITMEVYEMV--SKPMIYW-------ECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQW 153 (180)
T ss_dssp EEEEEESSS-EEEEEEEEEEECCC--CCCEEEE-------EGGGTEEEEECSSCTTCEEEEEETTEEEEEESSSEEEEEC
T ss_pred EEEEEEcCC-eEEEEEEEEEECCC--CCCEEEe-------cCCCEEEEEEeCCCCCCEEEEEECCeECcCCCCCEEEEEE
Confidence 999998876 55667777777642 3444332 2456999999943499999999999988643344454422
Q ss_pred CCceeeEEEEEEEEeCCeeEEEEEEE
Q psy16863 900 DGTCCLGIYTCEAHNCMGTTSSSAAL 925 (1075)
Q Consensus 900 ~~~~d~G~Y~C~a~N~~G~~~~~~~l 925 (1075)
..|+|.|+|.|.|.+|..++.+.+
T Consensus 154 --~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 154 --TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp --SCCSSCEEEEEEETTEEEEEEECC
T ss_pred --hhcCccEEEEEecCcCccccceeE
Confidence 567999999999999998776543
No 236
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.74 E-value=3e-18 Score=180.64 Aligned_cols=169 Identities=12% Similarity=0.196 Sum_probs=110.2
Q ss_pred ccceeeeecCCeEEEEEEEecCCCCe-----EEEEECCEEeec--------CCcEE-------E--EEeeCcEEEEEEcc
Q psy16863 754 GLKSCQATVNEEFKFTVQVSISPEPK-----VSWFRDDQQVVE--------SDNVK-------I--LKETLGVCHLKIHA 811 (1075)
Q Consensus 754 ~~~~~~~~~g~~~~l~C~v~g~p~p~-----v~W~k~g~~i~~--------~~~~~-------~--~~~~~~~~~L~I~~ 811 (1075)
.+....+..|+++.|.|.+.|.|.+. |.|+|++..... +.... + .....+...|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 34456788999999999999988876 999997432110 00000 0 00011234599999
Q ss_pred ccCCCCeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEc-cCCC-eeEEEECCEEcCC
Q psy16863 812 LEVADQAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIG-VPQP-TLKWFKDGRELKA 889 (1075)
Q Consensus 812 ~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g-~p~p-~v~W~k~g~~l~~ 889 (1075)
++.+|+|.|+|.|.|..|.....+.|.|..+| .+..........|+.++|.|.+.| .|.| .|+|+|||.++..
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P-----~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~ 163 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVASP-----ASRLLLDQVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPH 163 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCC-----EEEEECC--------CEEEEEEEEEBSSCCEEEEEEECSSSCS
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEecCC-----ceEEecCCccccCCCcEEEEEEccEECCCeEEEEEECCccCCC
Confidence 99999999999999999988888888888643 333323333456788889999999 7988 9999999964321
Q ss_pred C-----------------Ce----eEEEECCCCceeeEEEEEEEEeCCee--EEEEEEEEE
Q psy16863 890 G-----------------DI----HKIISGEDGTCCLGIYTCEAHNCMGT--TSSSAALLG 927 (1075)
Q Consensus 890 ~-----------------~~----~~i~~~~~~~~d~G~Y~C~a~N~~G~--~~~~~~l~v 927 (1075)
+ .. ..+.+......|.|.|+|.|.|..|. .+.++.|.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 164 PIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp CEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred ccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 1 11 12333333445689999999999996 455555565
No 237
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.74 E-value=6.8e-17 Score=162.31 Aligned_cols=160 Identities=18% Similarity=0.217 Sum_probs=115.4
Q ss_pred cCceeeccCCeEEEEEEEec-CCCcEEEEEECCEecC---CC---------------CcEEEEEcCCEEEEEEcccCCCC
Q psy16863 356 LHDIAVKVGTRARLLVEIRS-PTEIKIHWYRNDRKLE---EN---------------KIYRTQHDGNFYFIDLSSVSLFD 416 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g-~p~~~v~W~k~g~~l~---~~---------------~~~~~~~~g~~~~L~I~~v~~~d 416 (1075)
+..+.+.+|++++|.|.+.+ .+.+.|.|+|+|..+. .+ .|+.+.. ...|.|.+++.+|
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~---~~sL~I~~v~~~D 81 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQ---SYSLQLSNLKMED 81 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECT---TCCEEECSCCGGG
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECC---CeEEEECCCCccc
Confidence 44567889999999999865 4457999999987542 11 1333321 1359999999999
Q ss_pred ceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCC-eEEEEEEEECC-CCCeEEEEeCCEeccCCCEEE
Q psy16863 417 SGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQG-TVSLECKVMGI-PTPQLIWYKDNKKIKAGDIFA 494 (1075)
Q Consensus 417 ~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~-~v~l~C~~~g~-p~~~v~W~~~g~~l~~~~~~~ 494 (1075)
+|.|+|.|.|..|.....+.|.|..++. .|.+.... .....|. .++|.|.+.|. |.+.|+|+|+|..+..+....
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~L~V~~~~~--~p~i~~~~-~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~~~l~ 158 (193)
T 2if7_A 82 TGSYRAQISTKTSAKLSSYTLRILRQLR--NIQVTNHS-QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLT 158 (193)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEECCCE--EEEEEECC-C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESSSEEE
T ss_pred CceEEEEEEecCCCeEEEEEEEEEccCC--CCeEecCc-eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCCCeEE
Confidence 9999999999988776677888875532 23333332 2233455 89999999985 578999999999987766655
Q ss_pred EEeCCCCCCCcEEEEEEEEecceeeEEE
Q psy16863 495 LTANPKDPSSLGTYTCEAVNCMGAAFST 522 (1075)
Q Consensus 495 l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 522 (1075)
+... ....|+|.|+|.|.|..|.....
T Consensus 159 i~~~-~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 159 VSWD-PRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp EEEC-TTTCSCCEEEEEEEETTEEEEEE
T ss_pred EEec-cCcCCCCcEEEEEECCCCccccc
Confidence 4432 22348999999999999987443
No 238
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.74 E-value=1.5e-17 Score=175.72 Aligned_cols=252 Identities=13% Similarity=0.156 Sum_probs=105.1
Q ss_pred cccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEec--CCCcc-ccCCCeEEEeeCCeEEEEEcccCCCCCEEEEE
Q psy16863 249 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRA--QGDHP-IFGNRFRAINRDGRTELNIRRVRRDDGGRYSV 325 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~--~~~~~-~~~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~C 325 (1075)
+++..|.+|+++.|.|..+-+ .+..+.|.. .+... ..+ .....|.|.++..+ |.|+|
T Consensus 6 P~~~~V~~G~sv~l~Cs~~c~----------~p~~~~~~t~l~~~~~~~~g--------~~~~~~~l~~v~~~--~~y~C 65 (291)
T 1mq8_A 6 PSKVILPRGGSVLVTCSTSCD----------QPKLLGIETPLPKKELLLPG--------NNRKVYELSNVQED--SQPMC 65 (291)
T ss_dssp CSEEEECTTCEEEEEEEECCS----------SCSEEEEECSSCCCCCCCSC--------SSEEEEEEESCCSC--CCCEE
T ss_pred CCccEEcCCCeEEEEEeCCCC----------CCccceEEecCCCcccccCC--------CceEEEEEEecccC--CeEEE
Confidence 345678999999999987632 122345532 11111 111 12236888888754 46999
Q ss_pred EEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecC-CCc--EEEEEECCEecCCCCcEEEEEcC
Q psy16863 326 TASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSP-TEI--KIHWYRNDRKLEENKIYRTQHDG 402 (1075)
Q Consensus 326 ~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~-p~~--~v~W~k~g~~l~~~~~~~~~~~g 402 (1075)
.+.......+..+.|.|+.. |..|.+. +....+.+|+.++|.|.+.|. |.. .|+|||+++.|..... ..+.
T Consensus 66 ~~~~~~~~~~~~v~l~V~~~-P~~v~I~--~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~---~~~~ 139 (291)
T 1mq8_A 66 YSNCPDGQSTAKTFLTVYWT-PERVELA--PLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA---VGEP 139 (291)
T ss_dssp EEECSSCEEEEECEEEECBC-CSCCCBC--CCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEEC---CBTT
T ss_pred EEEcCCccEEEEEEEEEecC-CCCCEEe--cCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccC---CCCC
Confidence 99765445677778888762 3333333 223558899999999999774 432 7999999988853221 1122
Q ss_pred CEEEEEEcccCCCCceeEEEEEEeCCCc--------eeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCC
Q psy16863 403 NFYFIDLSSVSLFDSGRWTCLAENAVGR--------SHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIP 474 (1075)
Q Consensus 403 ~~~~L~I~~v~~~d~G~Y~C~a~n~~g~--------~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p 474 (1075)
...+|.+.....+|.+.|+|+|.|..+. .+....|.|.++|.. .+.+..+ ..+.+|+.+.|.|.+.|.|
T Consensus 140 ~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~-~~~~~~p--~~l~eG~~v~l~C~~~g~~ 216 (291)
T 1mq8_A 140 AEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPAT-PPQLVSP--RVLEVDTQGTVVCSLDGLF 216 (291)
T ss_dssp EEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-----------------------------------
T ss_pred ceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCC-CceecCC--cCccCCCeEEEEEEcCCCC
Confidence 2345666666666666999999997653 244567888776532 1222221 2578999999999999975
Q ss_pred CC---eEEEEeCCEeccCC-----CEEEEEeCC-CCC--CCcEEEEEEEEecceeeEEEEEEEEec
Q psy16863 475 TP---QLIWYKDNKKIKAG-----DIFALTANP-KDP--SSLGTYTCEAVNCMGAAFSTSRVIARG 529 (1075)
Q Consensus 475 ~~---~v~W~~~g~~l~~~-----~~~~l~i~~-~~~--~d~G~Y~C~a~n~~g~~~~~~~v~v~~ 529 (1075)
++ .++|+++|+.+... +........ +.. ++.+.|+|.|.|.....++...|.|.+
T Consensus 217 P~~~~~v~w~~~g~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~ 282 (291)
T 1mq8_A 217 PVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYS 282 (291)
T ss_dssp ------------------------------------------------------------------
T ss_pred CCcccEEEEEECCEecCceeeecCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEc
Confidence 54 69999999998632 222222211 123 346788899988665566677777763
No 239
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.73 E-value=8.7e-18 Score=165.70 Aligned_cols=156 Identities=19% Similarity=0.241 Sum_probs=116.8
Q ss_pred CceeeccCCeEEEEEEEe--cCCCcEEEEEE--CCEec----------CCCCcEEEEEcCCEEEEEEcccCCCCceeEEE
Q psy16863 357 HDIAVKVGTRARLLVEIR--SPTEIKIHWYR--NDRKL----------EENKIYRTQHDGNFYFIDLSSVSLFDSGRWTC 422 (1075)
Q Consensus 357 ~~~~v~~G~~v~l~C~~~--g~p~~~v~W~k--~g~~l----------~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C 422 (1075)
..+...+|++++|.|... +.+.+.|.|+| ++..| ..+.|+.+..+| .|.|.+++.+|+|.|+|
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng---sL~I~~v~~~DsG~Y~c 83 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKIKHLKTDDQDIYKV 83 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS---CEEECSCCGGGCEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC---CEEECCCChhhCEEEEE
Confidence 346778999999999542 34567999999 98876 345677766555 48999999999999999
Q ss_pred EEEeCCCcee--eEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCCEEEEEeCCC
Q psy16863 423 LAENAVGRSH--CSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGDIFALTANPK 500 (1075)
Q Consensus 423 ~a~n~~g~~~--~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~~~~l~i~~~ 500 (1075)
.|.|..|... ..+.|.|..+ ...|.+.. .+..+.|.|.+.+.|.+.|.|+++|..+ .+....+.+..
T Consensus 84 ~~~n~~g~~~~~~~~~L~V~~~--~~~P~i~~-------~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~~~~~i~~~~- 152 (182)
T 1hnf_A 84 SIYDTKGKNVLEKIFDLKIQER--VSKPKISW-------TCINTTLTCEVMNGTDPELNLYQDGKHL-KLSQRVITHKW- 152 (182)
T ss_dssp EEEETTSCEEEEEEEEEEEECC--CCCCEEEE-------ETTTTEEEEECSSCSSCEEEEEESSCEE-EEESSCEEEEC-
T ss_pred EEEeCCCceeEEEEEEEEEcCc--CCCCEEEE-------ccCcEEEEeEccCCCCCEEEEEECCEEC-CCCCcEEEEec-
Confidence 9999988764 3455666543 23344432 2347899999999999999999999988 32223344333
Q ss_pred CCCCcEEEEEEEEecceeeEEEEEEE
Q psy16863 501 DPSSLGTYTCEAVNCMGAAFSTSRVI 526 (1075)
Q Consensus 501 ~~~d~G~Y~C~a~n~~g~~~~~~~v~ 526 (1075)
...|+|.|+|.|.|..|...+...+.
T Consensus 153 ~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 153 TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 46899999999999999887776553
No 240
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.73 E-value=9.2e-18 Score=179.33 Aligned_cols=192 Identities=16% Similarity=0.213 Sum_probs=110.3
Q ss_pred cCCCceEEEEEEecCceEEEEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEE
Q psy16863 702 TSSLGSYCCVAKNVMGKAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVS 781 (1075)
Q Consensus 702 ~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~ 781 (1075)
..|.+.|.|.|.|..|....+..+ .+...+..+.+.+|++++|.|.+.+ +.+.+.
T Consensus 5 ~~~~~~y~~~~~~~~g~~~~~~~~------------------------~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~ 59 (270)
T 3qib_D 5 RADLIAYLKQATKGGGGSGGGGGM------------------------KVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVF 59 (270)
T ss_dssp -----------------------C------------------------CCEEECSEEEEETTSCEEEEEECCT-TCCEEE
T ss_pred hhhHHHHHHHHhccCCccccccce------------------------eEEeCCCeEEEcCCCCEEEEEEecC-CCceEE
Confidence 357899999999988876554333 3344455677999999999999875 778999
Q ss_pred EEEC--CEE------------eecC---C-cEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCc----eEEEEEEEEE
Q psy16863 782 WFRD--DQQ------------VVES---D-NVKILKETLGVCHLKIHALEVADQAEWKCIATNDFG----QSITSCFLKL 839 (1075)
Q Consensus 782 W~k~--g~~------------i~~~---~-~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G----~~~~s~~l~V 839 (1075)
|||. +.. .... . ++.+.....+.+.|.|.+++.+|+|.|.|.|.|..+ .......|.|
T Consensus 60 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V 139 (270)
T 3qib_D 60 WYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLV 139 (270)
T ss_dssp EEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEE
T ss_pred EEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEE
Confidence 9992 211 1111 1 555543334567999999999999999999997432 2223456777
Q ss_pred EecC-CCCCCeee-eecce-eecCCCeEEEEEEEEc-cCCC-eeEEEECCEEcCCCC----------------eeEE---
Q psy16863 840 NVPK-HYKKPKFL-EELKA-VLSEGGAVNLECKVIG-VPQP-TLKWFKDGRELKAGD----------------IHKI--- 895 (1075)
Q Consensus 840 ~~~~-~~~~p~~~-~~~~~-~~~~g~~~~L~C~v~g-~p~p-~v~W~k~g~~l~~~~----------------~~~i--- 895 (1075)
.... ...+|.+. ..... .+..|+.++|.|.+.| .|.| .|+|+|||.++..+. .+.+
T Consensus 140 ~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~ 219 (270)
T 3qib_D 140 LEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSR 219 (270)
T ss_dssp ESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEE
T ss_pred ccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEE
Confidence 6421 22244432 22221 2446999999999998 6666 799999999986531 1221
Q ss_pred -EECCCCcee-eEEEEEEEEeCCee
Q psy16863 896 -ISGEDGTCC-LGIYTCEAHNCMGT 918 (1075)
Q Consensus 896 -~~~~~~~~d-~G~Y~C~a~N~~G~ 918 (1075)
.+......| .|.|+|.|.|....
T Consensus 220 L~i~~~~~~d~~g~YtC~v~~~~l~ 244 (270)
T 3qib_D 220 LRVSATFWQNPRNHFRCQVQFYGLS 244 (270)
T ss_dssp EEEEHHHHHSTTCEEEEEEEECCBC
T ss_pred EEEcHHHhccCCCeEEEEEEecCCC
Confidence 222222234 89999999997654
No 241
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.73 E-value=2.1e-17 Score=169.07 Aligned_cols=162 Identities=17% Similarity=0.299 Sum_probs=121.2
Q ss_pred cCceeeccCCeEEEEEEEecCCCcEEEEEECC--Eec------------CCCCcEEEEEcCCEEEEEEcccCCCCceeEE
Q psy16863 356 LHDIAVKVGTRARLLVEIRSPTEIKIHWYRND--RKL------------EENKIYRTQHDGNFYFIDLSSVSLFDSGRWT 421 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g--~~l------------~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~ 421 (1075)
+..+.+.+|++++|.|.+.+.|.+.|.|||++ ..+ ....++.+...+....|.|.+++.+|+|.|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 67788999999999999999888899999953 222 1135677666777778999999999999999
Q ss_pred EEEEeCCCcee-eEEEEEeecCCCCCCCeeeee-cceEEecCCeEEEEEEEEC-CCCC-eEEEEeCCEeccCC-------
Q psy16863 422 CLAENAVGRSH-CSCELSVLVPKAYKAPFFTKE-LEAILTEQGTVSLECKVMG-IPTP-QLIWYKDNKKIKAG------- 490 (1075)
Q Consensus 422 C~a~n~~g~~~-~s~~l~V~~~~~~~~p~~~~~-~~~~~~~g~~v~l~C~~~g-~p~~-~v~W~~~g~~l~~~------- 490 (1075)
|.|.|..+... ....|.|.... .+|.+... ......+|+.++|.|.+.| .|++ .|+|+|||+++..+
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~--~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~ 164 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRAD--AAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTD 164 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCC--BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECC
T ss_pred EEEEcCCCceeCCCEEEEEcCCC--cCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCC
Confidence 99999876432 23466775432 23444432 2222347899999999997 4554 89999999988654
Q ss_pred -----CEE----EEEeCCCCCCCcEEEEEEEEecceee
Q psy16863 491 -----DIF----ALTANPKDPSSLGTYTCEAVNCMGAA 519 (1075)
Q Consensus 491 -----~~~----~l~i~~~~~~d~G~Y~C~a~n~~g~~ 519 (1075)
..+ .|.|..+..+|+|.|+|.|.|.....
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 165 QDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp CCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred ccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 111 57888888889999999999976543
No 242
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.73 E-value=1.7e-15 Score=186.28 Aligned_cols=418 Identities=14% Similarity=0.122 Sum_probs=239.3
Q ss_pred eEEEEccCCCeeEEEeeCCCceeccCcEEEEecCCeEEEEEceeccCC-CeEEEEEEEcCceeEEEEEEEeeec-cCCCC
Q psy16863 165 IKCQFDLNNTIPFSFRAQGDHPIFGNRFRAINRDGRTELNIRRVRRDD-GGRYSVTASNESGYSTAKFELSVES-QVPDA 242 (1075)
Q Consensus 165 ~~c~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D-~G~Y~C~a~n~~g~~~~~~~l~V~~-~~~~~ 242 (1075)
+.|.+.|.|.+.+.|.++|.....-. ...|.|..+...+ .+.|.|.+.|..|..... .+.+.. ..+.+
T Consensus 96 v~c~~~g~P~p~i~W~k~g~~~~~~~---------~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~~~~~~~~~~ 165 (731)
T 2v5y_A 96 VYVKVNNGPLGNPIWNISGDPTRTWN---------RAELAISTFWPNFYQVIFEVITSGHQGYLAID-EVKVLGHPCTRT 165 (731)
T ss_dssp EEEEETTCCCCSEEEEECCCCCSSCE---------EEEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBEEESSCCSSS
T ss_pred EEEecCCCCccceeEEEeCCcCCcee---------EEEEEEeecCCCceEEEEEEEecCCceEEEEe-eEEeeecccccc
Confidence 55666677888999999997643211 1134454442222 367777776666654322 122221 23356
Q ss_pred CccccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEec--CCCccccCCCeE-EEeeCCeEEEEEcccCCCC
Q psy16863 243 PAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRA--QGDHPIFGNRFR-AINRDGRTELNIRRVRRDD 319 (1075)
Q Consensus 243 p~~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~--~~~~~~~~~~~~-~~~~~~~~~L~I~~~~~~d 319 (1075)
|.|. .+.+..+.+|+.++|.|.+.+ .+.+.+.||+ .++..+....+. +.......+|+|.++..+|
T Consensus 166 p~~~-~~~~~~v~~G~~v~l~C~~~g----------~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d 234 (731)
T 2v5y_A 166 PHFL-RIQNVEVNAGQFATFQCSAIG----------RTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRD 234 (731)
T ss_dssp CEEC-CCCCEEEETTSCEEEEEEEES----------CCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTT
T ss_pred cccc-cccceEEeCCCcEEEEEEeCC----------CCCCceeEEEecCCCccccccceEEeccccceEEEEEccccccc
Confidence 6666 667899999999999887764 3445566554 455554422211 1111223589999999999
Q ss_pred CEEEEEEEEeCCee-EEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEec---CCC---cEEEEEECCEecCC
Q psy16863 320 GGRYSVTASNESGY-STAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRS---PTE---IKIHWYRNDRKLEE 392 (1075)
Q Consensus 320 ~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g---~p~---~~v~W~k~g~~l~~ 392 (1075)
.|.|+|.|.|..|. .+..+.|.|.. +|.+...+.... .....+.|.|.... ..+ ..|.|.+.+..
T Consensus 235 ~g~Y~c~A~n~~G~~~s~~~~l~V~~----~P~~~~~p~~~~-~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~--- 306 (731)
T 2v5y_A 235 AGKYRCMIRTEGGVGISNYAELVVKE----PPVPIAPPQLAS-VGATYLWIQLNANSINGDGPIVAREVEYCTASGS--- 306 (731)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEC----CCCBSSCCEEEE-ECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSS---
T ss_pred CeEEEEEEECCCCCcceeeEEEEEec----CCCCCCCcceec-cCCceEEEEeCCcccCCCCccEEEEEEEEECCCC---
Confidence 99999999999997 67777888875 333322222222 23467888887532 111 16677664321
Q ss_pred CCcEEEEEcCCEEEEEEcccCCCCceeEEEEEE--eCCCceeeEEEEEeecCCCC--CCCeeeeecceEEecCCeEEEEE
Q psy16863 393 NKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAE--NAVGRSHCSCELSVLVPKAY--KAPFFTKELEAILTEQGTVSLEC 468 (1075)
Q Consensus 393 ~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~--n~~g~~~~s~~l~V~~~~~~--~~p~~~~~~~~~~~~g~~v~l~C 468 (1075)
...+. ......+.|.++...+.+.|+|.|. |..|....+..+.+...+.. .+|. .+.........+.|..
T Consensus 307 --~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~---~~~~~~~~~~sv~l~W 380 (731)
T 2v5y_A 307 --WNDRQ-PVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPR---KLEVVEVKSRQITIRW 380 (731)
T ss_dssp --CEEEE-ECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCE---EEEEEEECSSCEEEEE
T ss_pred --ceEEe-ccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCc---eeEEEeccCCeEEEEE
Confidence 11121 1222457889999999999999999 99998765555555543321 1222 1111223345677877
Q ss_pred EEECC-----CC--CeEEEEeCC--E-------e-ccCCCEEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEeccc
Q psy16863 469 KVMGI-----PT--PQLIWYKDN--K-------K-IKAGDIFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQQ 531 (1075)
Q Consensus 469 ~~~g~-----p~--~~v~W~~~g--~-------~-l~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~~ 531 (1075)
..... +. ..|.|...+ . . ........+.+..+.......|++.|.|..|... +..+.+....
T Consensus 381 ~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~ 459 (731)
T 2v5y_A 381 EPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDE 459 (731)
T ss_dssp ECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCC
T ss_pred ECCCcccccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccC
Confidence 75321 11 245554432 1 0 1123345677888888888889999999999864 4444444210
Q ss_pred cccCCCCCCcCCCCCCCCCCeeeeeccceEe-ecCCeEEEEEEEecCCC----CceEEEEeCCeE---Eec-CCcEEEEE
Q psy16863 532 SFLDNDDVPFNSLMPPGPAPIFIKEVENVKA-KIGTSAILECQVLVPPW----PRSIYWYNKEGV---VEA-SDKYHIMA 602 (1075)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~G~~~~L~C~~~~~p~----p~~v~W~~~~~~---i~~-~~~~~~~~ 602 (1075)
..| .+++. ..+.. .....+.|.+.....+. ...|.|...+.. ... .....+..
T Consensus 460 ------------~~P-~~p~~-----~~~~~~~~~~si~l~W~~P~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~ 521 (731)
T 2v5y_A 460 ------------DLP-GAVPT-----ESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSK 521 (731)
T ss_dssp ------------CCC-CCCCT-----TTCEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEEEECC---CCCCCEEEEEE
T ss_pred ------------CCC-CCCCc-----ceEEeeecCCeEEEEEcCCCCCCCCccceEEEEEECcCCCccccccCcceEEee
Confidence 011 11111 01111 12567888887543221 123444432211 000 11222222
Q ss_pred cCCceEEEEEeeeeecCCceEEEEEECCCCceeee
Q psy16863 603 DGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFS 637 (1075)
Q Consensus 603 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 637 (1075)
.+ ....++|.++.+...+.|+..|.|..|....+
T Consensus 522 ~~-~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s 555 (731)
T 2v5y_A 522 LG-NETHFLFFGLYPGTTYSFTIRASTAKGFGPPA 555 (731)
T ss_dssp ET-TCCEEEECSCCTTEEEEEEEEEEETTEEEEEE
T ss_pred cC-CcceEEecCCCCCCEEEEEEEEEeCCccCCCc
Confidence 22 23478899999999999999999999887654
No 243
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.72 E-value=2.9e-17 Score=168.93 Aligned_cols=163 Identities=15% Similarity=0.172 Sum_probs=111.5
Q ss_pred cceeeeecCCeEEEEEEEecCC--CCeEEEEECC--EEee------------cCCcEEEEEeeCcEEEEEEccccCCCCe
Q psy16863 755 LKSCQATVNEEFKFTVQVSISP--EPKVSWFRDD--QQVV------------ESDNVKILKETLGVCHLKIHALEVADQA 818 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~~i~------------~~~~~~~~~~~~~~~~L~I~~~~~~D~G 818 (1075)
+....+.+|+++.|.|.+.+.+ .+.|.|+|++ ..+. ...++.+.. ..+...|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G 85 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK-SGTSATLGITGLQTGDEA 85 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE-ETTEEEEEECSCCGGGCE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEec-cCCEEEEEECCCCcccCE
Confidence 3456789999999999964433 5799999954 2211 134666654 445779999999999999
Q ss_pred EEEEEEEeCCce--EEEEEEEEEEecCCCCCCeeeeec-ceeecCCCeEEEEEEEEcc-CCC-eeEEEECCEEcCCCC--
Q psy16863 819 EWKCIATNDFGQ--SITSCFLKLNVPKHYKKPKFLEEL-KAVLSEGGAVNLECKVIGV-PQP-TLKWFKDGRELKAGD-- 891 (1075)
Q Consensus 819 ~Y~C~A~N~~G~--~~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~~~L~C~v~g~-p~p-~v~W~k~g~~l~~~~-- 891 (1075)
.|+|.|.|..|. ......|.|..+ ..+|.+.... ......|+.++|.|.+.|. |.| .|+|+|||.++..+.
T Consensus 86 ~Y~C~~~~~~~~~~~~~~~~l~V~~~--~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~ 163 (216)
T 2xzc_L 86 DYYCGTWDSSLNPVFGGGTKLEIKRT--VAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQE 163 (216)
T ss_dssp EEEEEEECTTSCEEEBCCEEEEECCC--CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEE
T ss_pred EEEEEEEeCCCcceECCCEEEEEcCC--CCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeE
Confidence 999999998872 122345666432 2345544321 1122368899999999984 554 899999999986551
Q ss_pred ----------ee----EEEECCCCceeeEEEEEEEEeCCeeEE
Q psy16863 892 ----------IH----KIISGEDGTCCLGIYTCEAHNCMGTTS 920 (1075)
Q Consensus 892 ----------~~----~i~~~~~~~~d~G~Y~C~a~N~~G~~~ 920 (1075)
.+ .|.+......|+|.|+|.|.|......
T Consensus 164 ~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 164 SVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred ecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 01 233333344579999999999876543
No 244
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.72 E-value=3.4e-17 Score=171.54 Aligned_cols=216 Identities=12% Similarity=0.081 Sum_probs=123.2
Q ss_pred CCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEecc----------CCCEEEEEeCCCCCCCcEEEEEEEEec
Q psy16863 446 KAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIK----------AGDIFALTANPKDPSSLGTYTCEAVNC 515 (1075)
Q Consensus 446 ~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~----------~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 515 (1075)
.+|.+...+...+.+|++++|.|.+.+ +.+.|.|+|+|..+. ......|.|..+..+|+|.|+|.+.|.
T Consensus 6 ~kP~i~~~P~~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 84 (257)
T 1b6u_A 6 RKPSLLAHPGPLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVT 84 (257)
T ss_dssp CCCEECCBSCSEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECS
T ss_pred CCCEEEEcCCCEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEecc
Confidence 456666666666889999999999975 567999999987653 224568999999999999999999875
Q ss_pred ce-----eeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCCceEEEEeCCe
Q psy16863 516 MG-----AAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWPRSIYWYNKEG 590 (1075)
Q Consensus 516 ~g-----~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p~~v~W~~~~~ 590 (1075)
.+ ..+....|.|.+. .++|.+...+. ..+.+|+.++|.|.+.+.+ + .+.|+|++.
T Consensus 85 ~~~~~~s~~S~~~~L~V~~~-----------------~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~~-~-~~~w~k~g~ 144 (257)
T 1b6u_A 85 HSPYQLSAPSDPLDIVITGL-----------------YEKPSLSAQPG-PTVLAGESVTLSCSSRSSY-D-MYHLSREGE 144 (257)
T ss_dssp SCTTSCCCCCCCEEEEEECS-----------------SCCCEEECSSC-TTCBTTCEEEEEEECSSCC-S-EEEEEETTS
T ss_pred CCCccccccCCCEEEecccC-----------------CCCcceEccCC-CccCCCCEEEEEEeCCCCC-c-EEEEEECCc
Confidence 32 2234456666531 12344443333 3578999999999988764 4 899999998
Q ss_pred EEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCc----eeeeeEEEEEeCCCCcCCCceeeccceeeecCC
Q psy16863 591 VVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGV----KQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDG 666 (1075)
Q Consensus 591 ~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~----~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~ 666 (1075)
.+...........+.....|.|.+++ |+|.|+|.|.|..+. .......|.|..++....|... ......|.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~~---~~~~~~g~ 219 (257)
T 1b6u_A 145 AHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPT---EPSSETGN 219 (257)
T ss_dssp SCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-------------------
T ss_pred ccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCCc---ccCccCCC
Confidence 77544322222222234689999998 999999999976432 2222234555444322111110 11233577
Q ss_pred eEEEEEEEecCCCCeEEEEECC
Q psy16863 667 LVSFECKVVGFPTPTLQWFKDN 688 (1075)
Q Consensus 667 ~~~l~C~v~g~p~p~v~W~k~g 688 (1075)
.+.|.|.+ |.+.+.+.|..-+
T Consensus 220 ~~~l~~~~-~~~~~~~~~~~~~ 240 (257)
T 1b6u_A 220 PRHLHAAA-EQKLISEEDLNLD 240 (257)
T ss_dssp ----------------------
T ss_pred eEEEEEEE-cchHHHHHHhhhh
Confidence 88899877 6788889998744
No 245
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.72 E-value=9.4e-17 Score=168.15 Aligned_cols=168 Identities=13% Similarity=0.149 Sum_probs=117.4
Q ss_pred EEeccceeeeecCCeEEEEEEEecCCCCeEEEEECC--E---Eee---------cCCcEEEEEeeCcEEEEEEccccCCC
Q psy16863 751 FIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDD--Q---QVV---------ESDNVKILKETLGVCHLKIHALEVAD 816 (1075)
Q Consensus 751 ~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g--~---~i~---------~~~~~~~~~~~~~~~~L~I~~~~~~D 816 (1075)
+...+....+.+|++++|.|.+.+.|.+.+.|+|++ . .+. ...++.+.. ..+...|.|.+++.+|
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D 82 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSG-SGTDFTLSINSVETED 82 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEEEESSCCGGG
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEec-CCCEEEEEECCCChHH
Confidence 445566778999999999999999999999999953 1 111 134666654 3456789999999999
Q ss_pred CeEEEEEEEeCCceEE-EEEEEEEEecCCC--------CCC-eeeeecceeecCCCeEEEEEEEEccC--CCeeEEEEC-
Q psy16863 817 QAEWKCIATNDFGQSI-TSCFLKLNVPKHY--------KKP-KFLEELKAVLSEGGAVNLECKVIGVP--QPTLKWFKD- 883 (1075)
Q Consensus 817 ~G~Y~C~A~N~~G~~~-~s~~l~V~~~~~~--------~~p-~~~~~~~~~~~~g~~~~L~C~v~g~p--~p~v~W~k~- 883 (1075)
+|.|.|.|.|..+... ....|.|..++.. ..+ .+.......+.+|++++|.|.+.|.| .+.|.|||+
T Consensus 83 ~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~ 162 (242)
T 2znx_A 83 FGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKF 162 (242)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred CEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeC
Confidence 9999999999865322 2456777665420 112 22333334578999999999999986 478999994
Q ss_pred -CEEcC---------------------------CCCeeEEEECCCCceeeEEEEEEEEeC--CeeE
Q psy16863 884 -GRELK---------------------------AGDIHKIISGEDGTCCLGIYTCEAHNC--MGTT 919 (1075)
Q Consensus 884 -g~~l~---------------------------~~~~~~i~~~~~~~~d~G~Y~C~a~N~--~G~~ 919 (1075)
|..+. .+....|.+......|+|.|+|.|.|. .|..
T Consensus 163 ~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~fG~g 228 (242)
T 2znx_A 163 PGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDGDYXGQG 228 (242)
T ss_dssp TTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTSSCBCCC
T ss_pred CCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCCcccCCC
Confidence 33220 112346777788889999999999993 4543
No 246
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.72 E-value=5.1e-17 Score=166.40 Aligned_cols=184 Identities=11% Similarity=0.113 Sum_probs=128.1
Q ss_pred cceeeccceeEEEEEecCCCceEEEEec-CCCeeeEEecCCCc-cccCCCeEEEeeCCeEEEEEcccCCCCCEEEEEEEE
Q psy16863 251 DIAVKVGTRARLLVEIRSPTEIKCQFDL-NNTIPFSFRAQGDH-PIFGNRFRAINRDGRTELNIRRVRRDDGGRYSVTAS 328 (1075)
Q Consensus 251 ~~~v~~g~~~~l~c~~~~~~~~~c~~~~-~~~~~~~w~~~~~~-~~~~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~C~a~ 328 (1075)
.+.+.+|+.++|.|.+.+.+.+.|.... +.......+..+.. .....++.+....+..+|+|.+++.+|+|.|+|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 88 (211)
T 3tv3_L 9 SASGSPGQSITISCTGTSNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSL 88 (211)
T ss_dssp EEEECTTCEEEEEEECCCSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEEEE
T ss_pred eEEEcCCCCEEEEEEECCCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEEEe
Confidence 6788999999999988722333332211 11111111111111 112467777777788899999999999999999999
Q ss_pred eCCe--eEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecC--CCcEEEEEECCEecCCCCcE---EEEEc
Q psy16863 329 NESG--YSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSP--TEIKIHWYRNDRKLEENKIY---RTQHD 401 (1075)
Q Consensus 329 n~~g--~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~--p~~~v~W~k~g~~l~~~~~~---~~~~~ 401 (1075)
|..+ .....+.|.|......+|.+...+....+.+|+.++|.|.+.|. |.+.+.|+|||..+..+... ....+
T Consensus 89 ~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~ 168 (211)
T 3tv3_L 89 VGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSN 168 (211)
T ss_dssp ETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTT
T ss_pred cCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCC
Confidence 9887 45556778887544467888776666666689999999999874 46899999999988653211 11122
Q ss_pred CCE---EEEEEcccCCCCceeEEEEEEeCCCceeeE
Q psy16863 402 GNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCS 434 (1075)
Q Consensus 402 g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s 434 (1075)
+.. ..|.|.++..+|+|.|+|.|.|..+....+
T Consensus 169 ~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~ 204 (211)
T 3tv3_L 169 NKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT 204 (211)
T ss_dssp SSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEE
T ss_pred CCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEee
Confidence 322 468899999999999999999998665544
No 247
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.72 E-value=5.6e-17 Score=171.26 Aligned_cols=170 Identities=13% Similarity=0.183 Sum_probs=120.1
Q ss_pred ceeeeecCCeEEEEEEEecCC--CCeEEEEEC--CEEee-----------------cCCcEEEEEe-eCcEEEEEEcccc
Q psy16863 756 KSCQATVNEEFKFTVQVSISP--EPKVSWFRD--DQQVV-----------------ESDNVKILKE-TLGVCHLKIHALE 813 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~--g~~i~-----------------~~~~~~~~~~-~~~~~~L~I~~~~ 813 (1075)
....+.+|++++|.|.+.+.| .+.|.|+|+ +..+. ...++.+..+ ..+...|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (256)
T 1nqb_A 8 GAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLT 87 (256)
T ss_dssp CCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCC
Confidence 446788999999999999886 679999994 32221 1356766544 2456799999999
Q ss_pred CCCCeEEEEEEEeCCce-----EEEEEEEEEEecCCCCCCeeeeecce-eecCCCeEEEEEEEEccCCC-----eeEEEE
Q psy16863 814 VADQAEWKCIATNDFGQ-----SITSCFLKLNVPKHYKKPKFLEELKA-VLSEGGAVNLECKVIGVPQP-----TLKWFK 882 (1075)
Q Consensus 814 ~~D~G~Y~C~A~N~~G~-----~~~s~~l~V~~~~~~~~p~~~~~~~~-~~~~g~~~~L~C~v~g~p~p-----~v~W~k 882 (1075)
.+|+|.|+|.|.|..|. ......|.|..+ |.+...+.. .+.+|++++|.|.+.|.|.+ .|.|||
T Consensus 88 ~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~-----~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k 162 (256)
T 1nqb_A 88 SEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSD-----IELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYL 162 (256)
T ss_dssp GGGCEEEEEEECCTTSSSSCSEECCCEEEEECCC-----CCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEE
T ss_pred hhhCEEEEEEEeeccCccceeEEcCceeeeeccc-----ccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEE
Confidence 99999999999998773 112345666532 334443333 47899999999999998876 899999
Q ss_pred --CCEEcC---------------------CCCeeEEEECCCCceeeEEEEEEEEeCCeeEEE-EEEEEEecC
Q psy16863 883 --DGRELK---------------------AGDIHKIISGEDGTCCLGIYTCEAHNCMGTTSS-SAALLGFED 930 (1075)
Q Consensus 883 --~g~~l~---------------------~~~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~-~~~l~v~~~ 930 (1075)
+|..+. .+....|.+......|+|.|+|.|.|..+..-. ...|.|..+
T Consensus 163 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~ 234 (256)
T 1nqb_A 163 QKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRA 234 (256)
T ss_dssp ECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC-
T ss_pred ECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEECC
Confidence 665431 012346778888889999999999996543322 334555433
No 248
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.72 E-value=1.3e-17 Score=172.26 Aligned_cols=167 Identities=16% Similarity=0.244 Sum_probs=116.7
Q ss_pred eeeeecCCeEEEEEEEecCC--CCeEEEEECC--EE---ee----------------cCCcEEEEEee-CcEEEEEEccc
Q psy16863 757 SCQATVNEEFKFTVQVSISP--EPKVSWFRDD--QQ---VV----------------ESDNVKILKET-LGVCHLKIHAL 812 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~~---i~----------------~~~~~~~~~~~-~~~~~L~I~~~ 812 (1075)
...+.+|+++.|.|.+.+.| .+.+.|||++ .. +. ...++.+..+. .+...|.|.++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (222)
T 1q9r_B 9 GGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTL 88 (222)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred ceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcC
Confidence 45688999999999999876 7899999853 21 10 12466665432 34678999999
Q ss_pred cCCCCeEEEEEEEeCCc-----eEEEEEEEEEEecCCCCCCeeee-ecceeecCCCeEEEEEEEEcc-CCC-eeEEEECC
Q psy16863 813 EVADQAEWKCIATNDFG-----QSITSCFLKLNVPKHYKKPKFLE-ELKAVLSEGGAVNLECKVIGV-PQP-TLKWFKDG 884 (1075)
Q Consensus 813 ~~~D~G~Y~C~A~N~~G-----~~~~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~~~L~C~v~g~-p~p-~v~W~k~g 884 (1075)
+.+|+|.|.|.|.|..| .......|.|...+ ..+|.+.. .....+.+|+.++|.|.+.|. |.| .|+|+|||
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g 167 (222)
T 1q9r_B 89 RAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAK-TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 167 (222)
T ss_dssp CGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSC-CBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CcccCeEEEEEEeccCCcccceEeCCceEEEeccCC-CCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecCC
Confidence 99999999999999764 11224567776422 23444432 222235689999999999986 888 99999999
Q ss_pred EEcCC--------CCee----EEEECCCCceeeEEEEEEEEeCCeeEEEEEEE
Q psy16863 885 RELKA--------GDIH----KIISGEDGTCCLGIYTCEAHNCMGTTSSSAAL 925 (1075)
Q Consensus 885 ~~l~~--------~~~~----~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 925 (1075)
..+.. +..+ .|.+......| |.|+|.|.|.+|.......+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i 219 (222)
T 1q9r_B 168 LSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 219 (222)
T ss_dssp BCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred eEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEec
Confidence 86632 1122 23444555567 99999999999987655443
No 249
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.72 E-value=5.2e-17 Score=170.20 Aligned_cols=164 Identities=15% Similarity=0.188 Sum_probs=118.0
Q ss_pred EEeccceeeeecCCeEEEEEEEecCC----CCeEEEEECC--EE---ee---------cCCcEEEEEeeCcEEEEEEccc
Q psy16863 751 FIEGLKSCQATVNEEFKFTVQVSISP----EPKVSWFRDD--QQ---VV---------ESDNVKILKETLGVCHLKIHAL 812 (1075)
Q Consensus 751 ~~~~~~~~~~~~g~~~~l~C~v~g~p----~p~v~W~k~g--~~---i~---------~~~~~~~~~~~~~~~~L~I~~~ 812 (1075)
+...+....+.+|++++|.|.+.+.| .+.|.|+|++ .. +. ...++.+.. ..+.+.|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v 82 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG-SRTDFTLIIDPV 82 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSC
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEe-cCCeEEEEEcCC
Confidence 44455667899999999999999998 7899999962 21 11 134666654 445778999999
Q ss_pred cCCCCeEEEEEEEeCCce-EEEEEEEEEEecCCCCCC-eeee-ecceeecCCCeEEEEEEEEccCC--CeeEEEEC--CE
Q psy16863 813 EVADQAEWKCIATNDFGQ-SITSCFLKLNVPKHYKKP-KFLE-ELKAVLSEGGAVNLECKVIGVPQ--PTLKWFKD--GR 885 (1075)
Q Consensus 813 ~~~D~G~Y~C~A~N~~G~-~~~s~~l~V~~~~~~~~p-~~~~-~~~~~~~~g~~~~L~C~v~g~p~--p~v~W~k~--g~ 885 (1075)
+.+|+|.|+|.|.|..|. ....+.|.|..++...+| .+.. +....+.+|++++|.|.+.|.|. +.|+|||+ |.
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~ 162 (240)
T 1moe_A 83 EADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQ 162 (240)
T ss_dssp CGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTS
T ss_pred ChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCC
Confidence 999999999999998664 233567777664421122 2332 22335789999999999999874 58999996 32
Q ss_pred EcC----------------------------CCCeeEEEECCCCceeeEEEEEEEEeC
Q psy16863 886 ELK----------------------------AGDIHKIISGEDGTCCLGIYTCEAHNC 915 (1075)
Q Consensus 886 ~l~----------------------------~~~~~~i~~~~~~~~d~G~Y~C~a~N~ 915 (1075)
.+. .+....|.+......|+|.|+|.|.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 163 GLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp CCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECST
T ss_pred CcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 220 012345777888889999999999853
No 250
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.72 E-value=4.1e-17 Score=168.23 Aligned_cols=167 Identities=14% Similarity=0.246 Sum_probs=118.4
Q ss_pred ecCceeeccCCeEEEEEEEecCC--CcEEEEEEC--CEecC-----------------CCCcEEEEEc--CCEEEEEEcc
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSPT--EIKIHWYRN--DRKLE-----------------ENKIYRTQHD--GNFYFIDLSS 411 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~--g~~l~-----------------~~~~~~~~~~--g~~~~L~I~~ 411 (1075)
.+..+.+.+|++++|.|.+.+.+ .+.|.|||+ |..+. ...|+.+..+ +....|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (219)
T 1c1e_H 6 QSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINN 85 (219)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECS
T ss_pred CCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECC
Confidence 34567889999999999998865 689999997 33221 1346665543 3456899999
Q ss_pred cCCCCceeEEEEEEeCCCce----eeEEEEEeecCCCCCCCeeee-ecceEEecCCeEEEEEEEEC-CCCC-eEEEEeCC
Q psy16863 412 VSLFDSGRWTCLAENAVGRS----HCSCELSVLVPKAYKAPFFTK-ELEAILTEQGTVSLECKVMG-IPTP-QLIWYKDN 484 (1075)
Q Consensus 412 v~~~d~G~Y~C~a~n~~g~~----~~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~v~l~C~~~g-~p~~-~v~W~~~g 484 (1075)
++.+|+|.|+|.|.|..+.. .....|.|...+. .+|.+.. .+...+.+|+.+.|.|.+.| .|.| .|+|+|+|
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~-~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g 164 (219)
T 1c1e_H 86 LKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKT-TPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 164 (219)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCC-BCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CCcccCEEEEEEEeccCcccceeecCceEEEEecCCC-CCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCC
Confidence 99999999999999986421 2346677766322 2344432 22233568999999999998 8998 99999999
Q ss_pred EeccC--------CCE----EEEEeCCCCCCCcEEEEEEEEecceeeEEEE
Q psy16863 485 KKIKA--------GDI----FALTANPKDPSSLGTYTCEAVNCMGAAFSTS 523 (1075)
Q Consensus 485 ~~l~~--------~~~----~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 523 (1075)
..+.. ... ..|.|..... |.|.|+|.|.|..|......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~~~ 214 (219)
T 1c1e_H 165 LSSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKVDK 214 (219)
T ss_dssp BCTTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEEEE
T ss_pred cccceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccEEE
Confidence 86421 111 2577744443 56999999999988765444
No 251
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.72 E-value=7.5e-18 Score=175.87 Aligned_cols=171 Identities=17% Similarity=0.165 Sum_probs=115.7
Q ss_pred CeEEeccceeeeecCCeEEEEEEEecCCC-C-eEEEEECC--EEe---e---------cCCcEEEEEeeCcEEEEEEccc
Q psy16863 749 PKFIEGLKSCQATVNEEFKFTVQVSISPE-P-KVSWFRDD--QQV---V---------ESDNVKILKETLGVCHLKIHAL 812 (1075)
Q Consensus 749 p~~~~~~~~~~~~~g~~~~l~C~v~g~p~-p-~v~W~k~g--~~i---~---------~~~~~~~~~~~~~~~~L~I~~~ 812 (1075)
+.+.. +....+.+|++++|.|.+.+.|. + .+.|||++ ..+ . ...++.+.. ..+...|.|.++
T Consensus 21 ~~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v 98 (234)
T 2j6e_L 21 SVLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSK-SGTSASLAISGL 98 (234)
T ss_dssp CCCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEE-ETTEEEEEEESC
T ss_pred cEEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEe-cCCeEEEEECCC
Confidence 33444 56677999999999999998653 4 79999963 222 0 124666554 345679999999
Q ss_pred cCCCCeEEEEEEEeCCce---EEEEEEEEEEecCCCCCCeeee-ecceeecCCCeEEEEEEEEccCCC--eeEEEECCEE
Q psy16863 813 EVADQAEWKCIATNDFGQ---SITSCFLKLNVPKHYKKPKFLE-ELKAVLSEGGAVNLECKVIGVPQP--TLKWFKDGRE 886 (1075)
Q Consensus 813 ~~~D~G~Y~C~A~N~~G~---~~~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~~~L~C~v~g~p~p--~v~W~k~g~~ 886 (1075)
+.+|+|.|+|.|.|..|. ......|.|...+. .+|.+.. .......+|+.++|.|.+.|.+++ .|+|+|||.+
T Consensus 99 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~-~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~ 177 (234)
T 2j6e_L 99 RSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPK-AAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAP 177 (234)
T ss_dssp CSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCC-CCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEE
T ss_pred CHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCC-CCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEE
Confidence 999999999999999883 22234555532211 2344332 111123468899999999986543 8999999999
Q ss_pred cCCCCe---------------eEEEECCCCceeeEEEEEEEEeCCeeEEEE
Q psy16863 887 LKAGDI---------------HKIISGEDGTCCLGIYTCEAHNCMGTTSSS 922 (1075)
Q Consensus 887 l~~~~~---------------~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~ 922 (1075)
+..+.. ..|.+......|+|.|+|.|.|..+....+
T Consensus 178 l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 228 (234)
T 2j6e_L 178 VKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT 228 (234)
T ss_dssp CCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEE
T ss_pred CCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEe
Confidence 864311 123333444467999999999998875433
No 252
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.72 E-value=7.5e-17 Score=165.48 Aligned_cols=167 Identities=16% Similarity=0.211 Sum_probs=122.1
Q ss_pred CeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECC---Ee--c---------CCCCcEEEEEcCCEEEEEEcccCCC
Q psy16863 350 PAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRND---RK--L---------EENKIYRTQHDGNFYFIDLSSVSLF 415 (1075)
Q Consensus 350 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g---~~--l---------~~~~~~~~~~~g~~~~L~I~~v~~~ 415 (1075)
|.+...+..+.+.+|++++|.|.+.+.|.+.|.|||.+ .. + ....++.+...+....|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 44566677889999999999999999889999999932 11 0 1245677766777788999999999
Q ss_pred CceeEEEEEEeCCCce-eeEEEEEeecCCCCCCCeeeeecc-eEEecCCeEEEEEEEECCCC--CeEEEEeCCEeccCCC
Q psy16863 416 DSGRWTCLAENAVGRS-HCSCELSVLVPKAYKAPFFTKELE-AILTEQGTVSLECKVMGIPT--PQLIWYKDNKKIKAGD 491 (1075)
Q Consensus 416 d~G~Y~C~a~n~~g~~-~~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~v~l~C~~~g~p~--~~v~W~~~g~~l~~~~ 491 (1075)
|+|.|+|.|.|..+.. .....|.|... ..+|.+..... .....|+.+.|.|.+.|.|+ +.++|+|+|+.+..+.
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~--~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 159 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEIKRA--DAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGV 159 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEECCC--CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred cCEEEEEecccCCceEEcCCceEEEecc--CCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCce
Confidence 9999999999876532 33456666332 23455544332 23456888999999998654 3899999999886531
Q ss_pred ------------E----EEEEeCCCCCCCcEEEEEEEEeccee
Q psy16863 492 ------------I----FALTANPKDPSSLGTYTCEAVNCMGA 518 (1075)
Q Consensus 492 ------------~----~~l~i~~~~~~d~G~Y~C~a~n~~g~ 518 (1075)
. ..|.+......|+|.|+|.|.|....
T Consensus 160 ~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 160 LQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred EeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 1 14556666667899999999997643
No 253
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.71 E-value=2.9e-16 Score=162.33 Aligned_cols=186 Identities=12% Similarity=0.156 Sum_probs=123.3
Q ss_pred cccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCC--------Cccc-------cCCCeEEEee---CCeEEE
Q psy16863 249 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQG--------DHPI-------FGNRFRAINR---DGRTEL 310 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~--------~~~~-------~~~~~~~~~~---~~~~~L 310 (1075)
...+.+.+|+.++|.|.+.+.+.. ......+.|++++ +... ...+..+..+ .+..+|
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~-----~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L 82 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQL-----DLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAAL 82 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSC-----CTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEE
T ss_pred CccEEEEcCCcEEEEeEecCCCCC-----CCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEE
Confidence 345678899999999997532210 0113345565543 1100 1234444322 245689
Q ss_pred EEcccCCCCCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEEC-CEe
Q psy16863 311 NIRRVRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRN-DRK 389 (1075)
Q Consensus 311 ~I~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~-g~~ 389 (1075)
.|.+++.+|+|.|+|.|.| .|.....+.|.|.. +|..........+.+|+.++|.|.+.|.|.+.|+|+++ |..
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~----~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~ 157 (222)
T 3sbw_C 83 QITDVKLQDAGVYRCMISY-GGADYKRITVKVNA----PYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQV 157 (222)
T ss_dssp EESSCCGGGCEEEEEEEES-SSEEEEEEEEEEEB----CCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCE
T ss_pred EEcCcccccCeEEEEEEEe-CCCceeEEEEEEEC----CCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCce
Confidence 9999999999999999999 66677788888885 22222111223678999999999999999999999999 666
Q ss_pred cCCCCcEEE--EEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCCC
Q psy16863 390 LEENKIYRT--QHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 390 l~~~~~~~~--~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~ 444 (1075)
+........ ..++....+.+..+..+|.|.|+|.|.|..|....++.|.|..+|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~ 214 (222)
T 3sbw_C 158 LSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPL 214 (222)
T ss_dssp ECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC--
T ss_pred ecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCcc
Confidence 654332222 2334444344445567899999999999999999898888876543
No 254
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.71 E-value=9.3e-17 Score=171.90 Aligned_cols=168 Identities=14% Similarity=0.203 Sum_probs=118.8
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCE-----Eee---------cCCcEEEEEeeCcEEEEEEcccc
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQ-----QVV---------ESDNVKILKETLGVCHLKIHALE 813 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~-----~i~---------~~~~~~~~~~~~~~~~L~I~~~~ 813 (1075)
.+.+...+....+.+|++++|.|.+.+.|.+.|.|+|++. .+. ...++.+.. ..+...|.|.+++
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~ 90 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG-SGTDFTLTISSLQ 90 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCC
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEec-cCCeEEEEEccCC
Confidence 4566777778889999999999999999999999999642 221 134666653 4457789999999
Q ss_pred CCCCeEEEEEEEeCCceE-EEEEEEEEEecCC---------CCCCeee-eecceeecCCCeEEEEEEEEccC--CCeeEE
Q psy16863 814 VADQAEWKCIATNDFGQS-ITSCFLKLNVPKH---------YKKPKFL-EELKAVLSEGGAVNLECKVIGVP--QPTLKW 880 (1075)
Q Consensus 814 ~~D~G~Y~C~A~N~~G~~-~~s~~l~V~~~~~---------~~~p~~~-~~~~~~~~~g~~~~L~C~v~g~p--~p~v~W 880 (1075)
.+|+|.|+|.|.|..+.. .....|.|..++. ..++.++ .+....+.+|++++|.|.+.|.| .+.|.|
T Consensus 91 ~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W 170 (276)
T 3auv_A 91 PEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHW 170 (276)
T ss_dssp GGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEE
T ss_pred hhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEE
Confidence 999999999999986542 2235677765432 1112222 22334578999999999999987 489999
Q ss_pred EECC--EEc------C------------C----------CCeeEEEECCCCceeeEEEEEEEEeCC
Q psy16863 881 FKDG--REL------K------------A----------GDIHKIISGEDGTCCLGIYTCEAHNCM 916 (1075)
Q Consensus 881 ~k~g--~~l------~------------~----------~~~~~i~~~~~~~~d~G~Y~C~a~N~~ 916 (1075)
||++ ..+ . . +....|.+......|+|.|+|.|.|..
T Consensus 171 ~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 236 (276)
T 3auv_A 171 VRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFF 236 (276)
T ss_dssp EEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred EEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCc
Confidence 9963 211 0 0 112367778888899999999999983
No 255
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.71 E-value=1.2e-16 Score=168.88 Aligned_cols=170 Identities=12% Similarity=0.204 Sum_probs=119.5
Q ss_pred CeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECC--E---Ee----------ecCCcEEEEE-eeCcEEEEEEccc
Q psy16863 749 PKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDD--Q---QV----------VESDNVKILK-ETLGVCHLKIHAL 812 (1075)
Q Consensus 749 p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g--~---~i----------~~~~~~~~~~-~~~~~~~L~I~~~ 812 (1075)
..+...+....+.+|++++|.|.+.+.|.+.+.|||.. . .+ ....++.+.. ...+...|.|.++
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 83 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 83 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSC
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCC
Confidence 34555667788999999999999999999999999832 1 11 1234555532 2345778999999
Q ss_pred cCCCCeEEEEEEEeCCceE----EEEEEEEEEec---------------CCCCCCeeeeeccee-ecCCCeEEEEEEEEc
Q psy16863 813 EVADQAEWKCIATNDFGQS----ITSCFLKLNVP---------------KHYKKPKFLEELKAV-LSEGGAVNLECKVIG 872 (1075)
Q Consensus 813 ~~~D~G~Y~C~A~N~~G~~----~~s~~l~V~~~---------------~~~~~p~~~~~~~~~-~~~g~~~~L~C~v~g 872 (1075)
+.+|+|.|.|.|.|..|.. .....|.|... ....+|.+...+... +.+|++++|.|.+.+
T Consensus 84 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 163 (256)
T 3tf7_C 84 HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTN 163 (256)
T ss_dssp CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECS
T ss_pred CcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCC
Confidence 9999999999999986521 12346666641 122345555554443 669999999999988
Q ss_pred cCCCeeEEEECC--EE---cC----------------------CCCeeEEEECCCCceeeEEEEEEEEeCCeeE
Q psy16863 873 VPQPTLKWFKDG--RE---LK----------------------AGDIHKIISGEDGTCCLGIYTCEAHNCMGTT 919 (1075)
Q Consensus 873 ~p~p~v~W~k~g--~~---l~----------------------~~~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~ 919 (1075)
. .|.+.|||++ .. +. .+....|.+......|+|.|+|.|.|..|..
T Consensus 164 ~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~ 236 (256)
T 3tf7_C 164 S-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQL 236 (256)
T ss_dssp C-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEE
T ss_pred C-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCcc
Confidence 7 7799999832 11 10 1234467888888899999999999987754
No 256
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.71 E-value=8.2e-17 Score=165.37 Aligned_cols=175 Identities=22% Similarity=0.203 Sum_probs=130.8
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecC--CcEEEEEeeCcEEEEEEccccCCCCeEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVES--DNVKILKETLGVCHLKIHALEVADQAEWKCIA 824 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~--~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A 824 (1075)
.+|.| ..+.+..+..|+.+.|.|.+.|.|.|.|+|+|+|..+..+ .++.+... .....|.|.+++.+|+|.|+|.|
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a 95 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNT-PSASYLEVTPDSENDFGNYNCTA 95 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEE-TTEEEEEECCCSGGGCEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecC-CCeeEEEEecCChhhCeEEEEEE
Confidence 57777 4566688999999999999999999999999999999766 45665543 34678999999999999999999
Q ss_pred EeCCceEEEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEE----EccCCC--eeEEEECCEEcCCC--------
Q psy16863 825 TNDFGQSITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKV----IGVPQP--TLKWFKDGRELKAG-------- 890 (1075)
Q Consensus 825 ~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v----~g~p~p--~v~W~k~g~~l~~~-------- 890 (1075)
.|..|....++.|.|..+|. +|..... ...+..+.|.|.. .|.|.+ .+.|.++|......
T Consensus 96 ~n~~g~~~~~~~l~v~~~P~--~p~~~~~----~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~ 169 (215)
T 3mtr_A 96 VNRIGQESLEFILVQADTPS--SPSIDQV----EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEA 169 (215)
T ss_dssp ECSSCEEEEEEEEEECCCCC--CCEEEEE----EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHH
T ss_pred EECCCceEEEEEEEECCCCC--CCcceEE----EEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccc
Confidence 99999998888888876543 3432221 2345788999973 233433 37899987542211
Q ss_pred -CeeEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEec
Q psy16863 891 -DIHKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFE 929 (1075)
Q Consensus 891 -~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 929 (1075)
....+.+......+.|.|+|.|.|.+|....+..+.+..
T Consensus 170 ~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T 209 (215)
T 3mtr_A 170 SMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 209 (215)
T ss_dssp HHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEEC
T ss_pred cccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEe
Confidence 013455566667789999999999999887766666543
No 257
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.71 E-value=1.6e-16 Score=170.59 Aligned_cols=176 Identities=14% Similarity=0.186 Sum_probs=122.8
Q ss_pred EeccceeeeecCCeEEEEEEEecCC--CCeEEEEECC--EEee-----------------cCCcEEEEEe-eCcEEEEEE
Q psy16863 752 IEGLKSCQATVNEEFKFTVQVSISP--EPKVSWFRDD--QQVV-----------------ESDNVKILKE-TLGVCHLKI 809 (1075)
Q Consensus 752 ~~~~~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~~i~-----------------~~~~~~~~~~-~~~~~~L~I 809 (1075)
+..+....+.+|++++|.|.+.+.| .+.+.|||++ ..+. ...++.+..+ ..+...|.|
T Consensus 30 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 109 (282)
T 1qok_A 30 LQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQL 109 (282)
T ss_dssp EEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEE
T ss_pred EECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEE
Confidence 3445567899999999999999885 6899999964 2110 1356666543 234678999
Q ss_pred ccccCCCCeEEEEEEEeCCc---eEE--EEEEEEEEecCC----------CCCCeeeeecce-eecCCCeEEEEEEEEcc
Q psy16863 810 HALEVADQAEWKCIATNDFG---QSI--TSCFLKLNVPKH----------YKKPKFLEELKA-VLSEGGAVNLECKVIGV 873 (1075)
Q Consensus 810 ~~~~~~D~G~Y~C~A~N~~G---~~~--~s~~l~V~~~~~----------~~~p~~~~~~~~-~~~~g~~~~L~C~v~g~ 873 (1075)
.+++.+|+|.|.|.|.|..| ... ..+.|.|..++. ..++.+...+.. .+.+|++++|.|.+.+.
T Consensus 110 ~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 189 (282)
T 1qok_A 110 SSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSS 189 (282)
T ss_dssp CSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSC
T ss_pred CcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCC
Confidence 99999999999999999977 211 245677776432 123444444433 47899999999999999
Q ss_pred CCCeeEEEE--CCEEcC---------------------CCCeeEEEECCCCceeeEEEEEEEEeCCeeEE-EEEEEEEe
Q psy16863 874 PQPTLKWFK--DGRELK---------------------AGDIHKIISGEDGTCCLGIYTCEAHNCMGTTS-SSAALLGF 928 (1075)
Q Consensus 874 p~p~v~W~k--~g~~l~---------------------~~~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~-~~~~l~v~ 928 (1075)
| +.|.||| +|..+. .+....|.+......|+|.|+|.|.|..+..- ..+.|.|.
T Consensus 190 ~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 267 (282)
T 1qok_A 190 V-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELK 267 (282)
T ss_dssp C-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred C-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEe
Confidence 9 8999999 666441 11234677888888999999999998644322 23345553
No 258
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.71 E-value=2e-17 Score=169.17 Aligned_cols=164 Identities=16% Similarity=0.255 Sum_probs=112.6
Q ss_pred ceeeeecCCeEEEEEEEecCC--CCeEEEEEC--CEEee----------------cCCcEEEEEee-CcEEEEEEccccC
Q psy16863 756 KSCQATVNEEFKFTVQVSISP--EPKVSWFRD--DQQVV----------------ESDNVKILKET-LGVCHLKIHALEV 814 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~--g~~i~----------------~~~~~~~~~~~-~~~~~L~I~~~~~ 814 (1075)
....+.+|+++.|.|.+.+.| .+.+.|+|+ |..+. ...++.+..+. .+.+.|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 87 (210)
T 3d9a_H 8 GPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTT 87 (210)
T ss_dssp SCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCc
Confidence 445688999999999999876 489999986 32211 23567765532 3467899999999
Q ss_pred CCCeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeee-ecceeecCCCeEEEEEEEEcc-CCC-eeEEEECCEEcCC--
Q psy16863 815 ADQAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLE-ELKAVLSEGGAVNLECKVIGV-PQP-TLKWFKDGRELKA-- 889 (1075)
Q Consensus 815 ~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~~~L~C~v~g~-p~p-~v~W~k~g~~l~~-- 889 (1075)
+|+|.|+|.|.|.. .......|.|...+ ..+|.+.. .....+.+|+.++|.|.+.|. |.| .|+|+|+|..+..
T Consensus 88 ~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~-~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~ 165 (210)
T 3d9a_H 88 EDTATYYCANWDGD-YWGQGTLVTVSAAK-TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT 165 (210)
T ss_dssp GGCEEEEEEETTSS-CBCCCEEEEECCCC-CBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred ccCEEEEEEEecCc-ccccceEEEeccCC-CCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEE
Confidence 99999999999964 11123456665321 23444432 222335689999999999997 888 9999999976421
Q ss_pred ------CCe----eEEEECCCCceeeEEEEEEEEeCCeeEEEE
Q psy16863 890 ------GDI----HKIISGEDGTCCLGIYTCEAHNCMGTTSSS 922 (1075)
Q Consensus 890 ------~~~----~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~ 922 (1075)
+.. ..|.+......| |.|+|.|.|.+|.....
T Consensus 166 ~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 166 FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp CCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 111 123333333334 99999999999987543
No 259
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.71 E-value=4.3e-17 Score=172.23 Aligned_cols=169 Identities=13% Similarity=0.165 Sum_probs=118.6
Q ss_pred eccceeeeecCCeEEEEEEEecCC--CCeEEEEEC--CEEe-----------------ecCCcEEEEEee-CcEEEEEEc
Q psy16863 753 EGLKSCQATVNEEFKFTVQVSISP--EPKVSWFRD--DQQV-----------------VESDNVKILKET-LGVCHLKIH 810 (1075)
Q Consensus 753 ~~~~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~--g~~i-----------------~~~~~~~~~~~~-~~~~~L~I~ 810 (1075)
..+....+.+|++++|.|.+.+.+ .+.+.|||. +..+ ....++.+..+. .+.+.|.|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 85 (253)
T 3uzq_A 6 EQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLS 85 (253)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeC
Confidence 344567789999999999999855 789999992 2211 012466665433 347789999
Q ss_pred cccCCCCeEEEEEEEeCCceEE-EEEEEEEEec----------CCCCCCeeeeecc-eeecCCCeEEEEEEEEccCCC--
Q psy16863 811 ALEVADQAEWKCIATNDFGQSI-TSCFLKLNVP----------KHYKKPKFLEELK-AVLSEGGAVNLECKVIGVPQP-- 876 (1075)
Q Consensus 811 ~~~~~D~G~Y~C~A~N~~G~~~-~s~~l~V~~~----------~~~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~p~p-- 876 (1075)
+++.+|+|.|.|.|.|..+... ....|.|... ....+|.+...+. ..+.+|++++|.|.+.+.|.+
T Consensus 86 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~ 165 (253)
T 3uzq_A 86 SLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRYG 165 (253)
T ss_dssp SCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEETT
T ss_pred CCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccCC
Confidence 9999999999999999766542 3456666642 1122345554444 347899999999999998887
Q ss_pred --eeEEEEC--CEEcC---------------------CCCeeEEEECCCCceeeEEEEEEEEeCCeeEEE
Q psy16863 877 --TLKWFKD--GRELK---------------------AGDIHKIISGEDGTCCLGIYTCEAHNCMGTTSS 921 (1075)
Q Consensus 877 --~v~W~k~--g~~l~---------------------~~~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~ 921 (1075)
.+.|||+ |..+. .+....|.+......|+|.|.|.|.|..+..-.
T Consensus 166 ~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg 235 (253)
T 3uzq_A 166 NSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFG 235 (253)
T ss_dssp EECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBC
T ss_pred CcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEEC
Confidence 8999994 32221 112345788888889999999999997654433
No 260
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.71 E-value=1e-16 Score=167.61 Aligned_cols=169 Identities=15% Similarity=0.227 Sum_probs=124.8
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECC--Ee------------cCCCCcEEEEEcCCEEEEEEcccCC
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRND--RK------------LEENKIYRTQHDGNFYFIDLSSVSL 414 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g--~~------------l~~~~~~~~~~~g~~~~L~I~~v~~ 414 (1075)
.+.+...+..+.+.+|++++|.|.+.+.+.+.+.|||++ .. .....++.....+....|.|.+++.
T Consensus 24 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 103 (237)
T 3sob_L 24 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 103 (237)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred cceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 344556677789999999999999988888999999943 11 1224577777677778899999999
Q ss_pred CCceeEEEEEEeCCCce-eeEEEEEeecCCCCCCCeeeeecc-eEEecCCeEEEEEEEEC-CC-CCeEEEEeCCEeccCC
Q psy16863 415 FDSGRWTCLAENAVGRS-HCSCELSVLVPKAYKAPFFTKELE-AILTEQGTVSLECKVMG-IP-TPQLIWYKDNKKIKAG 490 (1075)
Q Consensus 415 ~d~G~Y~C~a~n~~g~~-~~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~v~l~C~~~g-~p-~~~v~W~~~g~~l~~~ 490 (1075)
+|+|.|+|.+.|..+.. .....|.|... ..+|.+..... ....+|+.+.|.|.+.| .| .+.|+|+|+|..+..+
T Consensus 104 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~--~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~ 181 (237)
T 3sob_L 104 EDFATYYCQQSYTTPPTFGQGTKVEIKRT--VAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN 181 (237)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEECC--CBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSS
T ss_pred hhCeEEEEeeccCCceEEcCcEEEEEecC--CCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCc
Confidence 99999999999876532 23456676552 23455543222 22446889999999998 45 4799999999988642
Q ss_pred C----------------EEEEEeCCCCCCCcEEEEEEEEecceee
Q psy16863 491 D----------------IFALTANPKDPSSLGTYTCEAVNCMGAA 519 (1075)
Q Consensus 491 ~----------------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 519 (1075)
. ...|.+.....+|+|.|+|.|.|.....
T Consensus 182 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 226 (237)
T 3sob_L 182 SQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 226 (237)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred eeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCC
Confidence 1 2246777777888999999999987544
No 261
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.71 E-value=6.4e-17 Score=170.77 Aligned_cols=169 Identities=18% Similarity=0.234 Sum_probs=118.1
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCC-----CCeEEEEECC--EE---ee---------cCCcEEEEEeeCcEEEEE
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISP-----EPKVSWFRDD--QQ---VV---------ESDNVKILKETLGVCHLK 808 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p-----~p~v~W~k~g--~~---i~---------~~~~~~~~~~~~~~~~L~ 808 (1075)
.+.+...+..+.+.+|++++|.|.+.+.| .+.|.|||++ .. +. ...++.+.. ..+.+.|.
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~ 112 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSG-SGTDFTLR 112 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ETTEEEEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEc-cCCEEEEE
Confidence 45566667778899999999999999988 6899999964 11 11 134666654 44577999
Q ss_pred EccccCCCCeEEEEEEEeCCceEE-EEEEEEEEecCCCCCCeeeeec-ceeecCCCeEEEEEEEEcc-CCC-eeEEEECC
Q psy16863 809 IHALEVADQAEWKCIATNDFGQSI-TSCFLKLNVPKHYKKPKFLEEL-KAVLSEGGAVNLECKVIGV-PQP-TLKWFKDG 884 (1075)
Q Consensus 809 I~~~~~~D~G~Y~C~A~N~~G~~~-~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~~~L~C~v~g~-p~p-~v~W~k~g 884 (1075)
|.+++.+|+|.|+|.|.|..+... ....|.|..+ ..+|.+.... ...+.+|+.++|.|.+.|. |.+ .|+|+|||
T Consensus 113 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~--~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g 190 (252)
T 3bkj_L 113 ISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRA--DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDG 190 (252)
T ss_dssp ESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCC--CBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred ECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCC--CcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECC
Confidence 999999999999999999866432 2345666432 1245443321 1123468899999999985 443 79999999
Q ss_pred EEcCCCC------------e----eEEEECCCCceeeEEEEEEEEeCCeeE
Q psy16863 885 RELKAGD------------I----HKIISGEDGTCCLGIYTCEAHNCMGTT 919 (1075)
Q Consensus 885 ~~l~~~~------------~----~~i~~~~~~~~d~G~Y~C~a~N~~G~~ 919 (1075)
.++..+. . ..|.+......|+|.|+|.|.|.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 191 SERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp EEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred eecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 9886540 1 123333344467899999999987653
No 262
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.71 E-value=3.1e-16 Score=165.09 Aligned_cols=184 Identities=13% Similarity=0.143 Sum_probs=129.2
Q ss_pred cccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCC--c-----------------cccCCCeEEEee--CCe
Q psy16863 249 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGD--H-----------------PIFGNRFRAINR--DGR 307 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~--~-----------------~~~~~~~~~~~~--~~~ 307 (1075)
+....+.+|+.++|.|.+.+.+. +...+.|++.+. . .....++.+..+ ++.
T Consensus 9 p~~~~v~~G~~v~L~C~~~g~p~--------~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 80 (247)
T 2ghw_B 9 SGGGVVQPGKSLRLSCAASGFAF--------SSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNT 80 (247)
T ss_dssp ECCEEECTTCCEEEEEEEESSCG--------GGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTE
T ss_pred cCCEEEecCCcEEEEEEeccccC--------CCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCE
Confidence 34577899999999998875320 023345544211 0 012357776653 456
Q ss_pred EEEEEcccCCCCCEEEEEEEEeCCee--EEEEEEEEEecCC-----------CCCCeeeeecCceeeccCCeEEEEEEEe
Q psy16863 308 TELNIRRVRRDDGGRYSVTASNESGY--STAKFELSVESQV-----------PDAPAFIRRLHDIAVKVGTRARLLVEIR 374 (1075)
Q Consensus 308 ~~L~I~~~~~~d~G~Y~C~a~n~~g~--~~~~~~l~V~~~~-----------~~~p~~~~~~~~~~v~~G~~v~l~C~~~ 374 (1075)
.+|+|.+++.+|+|.|+|.|.|..+. ....+.|.|.... ..++.+...+....+.+|++++|.|.+.
T Consensus 81 ~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~ 160 (247)
T 2ghw_B 81 LYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRAS 160 (247)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEES
T ss_pred EEEEECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeC
Confidence 79999999999999999999997332 2334577776421 2355566667778899999999999999
Q ss_pred cCCCcEEEEEE--CCEec------------CCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCce-eeEEEEEe
Q psy16863 375 SPTEIKIHWYR--NDRKL------------EENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRS-HCSCELSV 439 (1075)
Q Consensus 375 g~p~~~v~W~k--~g~~l------------~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~-~~s~~l~V 439 (1075)
+.|.+.+.||| +|..+ ....++.+...+....|.|.+++.+|+|.|+|.|.|..+.. .....|.|
T Consensus 161 ~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V 240 (247)
T 2ghw_B 161 QSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEV 240 (247)
T ss_dssp SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred CCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEE
Confidence 98888999999 56543 12356666666677889999999999999999999864332 22345555
Q ss_pred e
Q psy16863 440 L 440 (1075)
Q Consensus 440 ~ 440 (1075)
.
T Consensus 241 ~ 241 (247)
T 2ghw_B 241 K 241 (247)
T ss_dssp C
T ss_pred C
Confidence 4
No 263
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.70 E-value=5.6e-17 Score=167.85 Aligned_cols=174 Identities=14% Similarity=0.213 Sum_probs=115.0
Q ss_pred ceeeeecCCeEEEEEEEecCC--CCeEEEEECC--EE---e---e-----------cCCcEEEEEe-eCcEEEEEEcccc
Q psy16863 756 KSCQATVNEEFKFTVQVSISP--EPKVSWFRDD--QQ---V---V-----------ESDNVKILKE-TLGVCHLKIHALE 813 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~~---i---~-----------~~~~~~~~~~-~~~~~~L~I~~~~ 813 (1075)
....+.+|++++|.|.+.+.| .+.+.|||++ .. + . ...|+.+..+ ..+...|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (227)
T 1mju_H 8 GAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLT 87 (227)
T ss_dssp SEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCC
Confidence 345688999999999999887 6899999963 22 1 1 1356666543 2356799999999
Q ss_pred CCCCeEEEEEEEeCCceEE-EEEEEEEEecCCCCCCeee-eecceeecCCCeEEEEEEEEcc-CCC-eeEEEECCEEcCC
Q psy16863 814 VADQAEWKCIATNDFGQSI-TSCFLKLNVPKHYKKPKFL-EELKAVLSEGGAVNLECKVIGV-PQP-TLKWFKDGRELKA 889 (1075)
Q Consensus 814 ~~D~G~Y~C~A~N~~G~~~-~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~~~L~C~v~g~-p~p-~v~W~k~g~~l~~ 889 (1075)
.+|+|.|.|.|.|..+... ....|.|...+ ..+|.+. ......+.+|+.++|.|.+.|. |.| .|+|+|||..+..
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~-~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~ 166 (227)
T 1mju_H 88 SDDSAVYYCANKLGWFPYWGQGTLVTVSAAK-TTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGV 166 (227)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEECSSC-CBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTE
T ss_pred cccCEEEEEEECCCCceEEcCcEEEEEcCCC-CCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCc
Confidence 9999999999999743211 23467776422 1234432 2222235679999999999986 777 9999999986521
Q ss_pred --------CCe----eEEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEecCC
Q psy16863 890 --------GDI----HKIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFEDK 931 (1075)
Q Consensus 890 --------~~~----~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 931 (1075)
+.. ..|.+......| |.|+|.|.|..+.......+.+.++|
T Consensus 167 ~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p 219 (227)
T 1mju_H 167 HTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPT 219 (227)
T ss_dssp EECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC-
T ss_pred EECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCC
Confidence 011 134454444456 99999999998887666666655443
No 264
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.70 E-value=2e-16 Score=167.43 Aligned_cols=185 Identities=15% Similarity=0.171 Sum_probs=126.8
Q ss_pred cccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCC--Ccc----------------ccCCCeEEEee--CCeE
Q psy16863 249 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQG--DHP----------------IFGNRFRAINR--DGRT 308 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~--~~~----------------~~~~~~~~~~~--~~~~ 308 (1075)
+....+.+|+.++|.|.+.+.+ .+...+.|++++ ..+ ....++.+..+ ++..
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~p--------~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 78 (257)
T 1f3r_B 7 SGPGLVRPSETLSLTCTVSGFS--------LTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQV 78 (257)
T ss_dssp ECCSEECTTSEEEEEEEEESSC--------TTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEE
T ss_pred CCCccccCCceEEEEEEEeccc--------CCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEE
Confidence 4456789999999999987431 012334444431 100 01457777654 5667
Q ss_pred EEEEcccCCCCCEEEEEEEEeCCe-------e--EEEEEEEEEecCCC-----------CCCeeeeecCceeeccCCeEE
Q psy16863 309 ELNIRRVRRDDGGRYSVTASNESG-------Y--STAKFELSVESQVP-----------DAPAFIRRLHDIAVKVGTRAR 368 (1075)
Q Consensus 309 ~L~I~~~~~~d~G~Y~C~a~n~~g-------~--~~~~~~l~V~~~~~-----------~~p~~~~~~~~~~v~~G~~v~ 368 (1075)
+|+|.+++.+|+|.|.|.|.|..| . ....+.|.|..... .++.+...+..+.+.+|++++
T Consensus 79 ~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~ 158 (257)
T 1f3r_B 79 FLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVT 158 (257)
T ss_dssp EEEEESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEE
T ss_pred EEEECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEE
Confidence 999999999999999999999854 1 12345677764210 123445556677899999999
Q ss_pred EEEEEecCCCcEEEEEE--CCEecC------------CCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeE
Q psy16863 369 LLVEIRSPTEIKIHWYR--NDRKLE------------ENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCS 434 (1075)
Q Consensus 369 l~C~~~g~p~~~v~W~k--~g~~l~------------~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s 434 (1075)
|.|.+.+.+.+.+.||| +|..+. ...++.+..++....|.|.++..+|+|.|+|.|.|........
T Consensus 159 L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~g 238 (257)
T 1f3r_B 159 LSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAG 238 (257)
T ss_dssp EEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCC
T ss_pred EEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCC
Confidence 99999888888999999 665431 1356666656677789999999999999999999974111223
Q ss_pred EEEEeec
Q psy16863 435 CELSVLV 441 (1075)
Q Consensus 435 ~~l~V~~ 441 (1075)
..|.|..
T Consensus 239 t~l~V~~ 245 (257)
T 1f3r_B 239 TKLELKA 245 (257)
T ss_dssp CEECCSS
T ss_pred EEEEEeC
Confidence 4455543
No 265
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.70 E-value=2.4e-16 Score=165.14 Aligned_cols=164 Identities=13% Similarity=0.223 Sum_probs=122.3
Q ss_pred eeeeecCceeeccCCeEEEEEEEecCC----CcEEEEEECC--Eec------------CCCCcEEEEEcCCEEEEEEccc
Q psy16863 351 AFIRRLHDIAVKVGTRARLLVEIRSPT----EIKIHWYRND--RKL------------EENKIYRTQHDGNFYFIDLSSV 412 (1075)
Q Consensus 351 ~~~~~~~~~~v~~G~~v~l~C~~~g~p----~~~v~W~k~g--~~l------------~~~~~~~~~~~g~~~~L~I~~v 412 (1075)
.+...+..+.+.+|++++|.|.+.+.| .+.|.|||++ ..+ ....++.+...+....|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPV 82 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCC
Confidence 355566778999999999999998887 7899999963 211 1135677776777788999999
Q ss_pred CCCCceeEEEEEEeCCCc-eeeEEEEEeecCCCCC-CC-eeeeecceEEecCCeEEEEEEEECCCC--CeEEEEeC--CE
Q psy16863 413 SLFDSGRWTCLAENAVGR-SHCSCELSVLVPKAYK-AP-FFTKELEAILTEQGTVSLECKVMGIPT--PQLIWYKD--NK 485 (1075)
Q Consensus 413 ~~~d~G~Y~C~a~n~~g~-~~~s~~l~V~~~~~~~-~p-~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~v~W~~~--g~ 485 (1075)
+.+|+|.|+|.|.|..+. ....+.|.|..++... ++ .+..+....+.+|++++|.|.+.|.|. +.+.|+|+ +.
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~ 162 (240)
T 1moe_A 83 EADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQ 162 (240)
T ss_dssp CGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTS
T ss_pred ChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCC
Confidence 999999999999998664 3345678887654311 12 223333345889999999999999874 59999995 22
Q ss_pred ecc----------------------------CCCEEEEEeCCCCCCCcEEEEEEEEe
Q psy16863 486 KIK----------------------------AGDIFALTANPKDPSSLGTYTCEAVN 514 (1075)
Q Consensus 486 ~l~----------------------------~~~~~~l~i~~~~~~d~G~Y~C~a~n 514 (1075)
.+. ......|.|.++..+|+|.|+|.|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 163 GLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp CCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 210 12235799999999999999999985
No 266
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.70 E-value=1.6e-16 Score=167.15 Aligned_cols=164 Identities=13% Similarity=0.206 Sum_probs=115.1
Q ss_pred EEeccceeeeecCCeEEEEEEEecCC-----CCeEEEEECC--EE---ee---------cCCcEEEEEeeCcEEEEEEcc
Q psy16863 751 FIEGLKSCQATVNEEFKFTVQVSISP-----EPKVSWFRDD--QQ---VV---------ESDNVKILKETLGVCHLKIHA 811 (1075)
Q Consensus 751 ~~~~~~~~~~~~g~~~~l~C~v~g~p-----~p~v~W~k~g--~~---i~---------~~~~~~~~~~~~~~~~L~I~~ 811 (1075)
+...+..+.+.+|++++|.|.+.+.| .+.+.|+|++ .. +. ...++.+.. ..+...|.|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~ 82 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSG-SGTDFTLKISR 82 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESS
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEecc-CCCEEEEEECC
Confidence 44455667899999999999999988 6899999942 21 11 135666653 44577999999
Q ss_pred ccCCCCeEEEEEEEeCCceEE-EEEEEEEEecCCC---------CCCeeeeecceeecCCCeEEEEEEEEccC--CCeeE
Q psy16863 812 LEVADQAEWKCIATNDFGQSI-TSCFLKLNVPKHY---------KKPKFLEELKAVLSEGGAVNLECKVIGVP--QPTLK 879 (1075)
Q Consensus 812 ~~~~D~G~Y~C~A~N~~G~~~-~s~~l~V~~~~~~---------~~p~~~~~~~~~~~~g~~~~L~C~v~g~p--~p~v~ 879 (1075)
++.+|+|.|.|.|.|..+... ..+.|.|..++.. .++.+.......+.+|++++|.|.+.+.| .+.+.
T Consensus 83 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 162 (247)
T 1svz_A 83 VEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMH 162 (247)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEE
T ss_pred CCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEE
Confidence 999999999999999866422 2456777654310 11223333344578999999999999985 56899
Q ss_pred EEECC--EEc------C------------C----------CCeeEEEECCCCceeeEEEEEEEEeC
Q psy16863 880 WFKDG--REL------K------------A----------GDIHKIISGEDGTCCLGIYTCEAHNC 915 (1075)
Q Consensus 880 W~k~g--~~l------~------------~----------~~~~~i~~~~~~~~d~G~Y~C~a~N~ 915 (1075)
|||++ ..+ . . +....|.+......|+|.|.|.|.|.
T Consensus 163 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 163 WVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 99963 211 0 0 11246777788889999999999995
No 267
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.70 E-value=1.1e-16 Score=168.82 Aligned_cols=165 Identities=14% Similarity=0.226 Sum_probs=116.8
Q ss_pred CeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECC-----EEe---------ecCCcEEEEEeeCcEEEEEEccccC
Q psy16863 749 PKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDD-----QQV---------VESDNVKILKETLGVCHLKIHALEV 814 (1075)
Q Consensus 749 p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g-----~~i---------~~~~~~~~~~~~~~~~~L~I~~~~~ 814 (1075)
+.+...+....+.+|++++|.|.+.+.|.+.+.|+|++ ..+ ....++.+.. ..+.+.|.|.+++.
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~ 83 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSG-SGTDYSLTISNLEQ 83 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-ETTEEEEEESSCCG
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeC-CCCEEEEEEccCCh
Confidence 44555666778999999999999999999999999953 111 1134665543 44577999999999
Q ss_pred CCCeEEEEEEEeCCceEE-EEEEEEEEecCC---------------CCCCeeeeecceeecCCCeEEEEEEEEccC--CC
Q psy16863 815 ADQAEWKCIATNDFGQSI-TSCFLKLNVPKH---------------YKKPKFLEELKAVLSEGGAVNLECKVIGVP--QP 876 (1075)
Q Consensus 815 ~D~G~Y~C~A~N~~G~~~-~s~~l~V~~~~~---------------~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p--~p 876 (1075)
+|+|.|.|.|.|..+... ....|.|..++. ..++....+....+.+|++++|.|.+.|.| .+
T Consensus 84 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~ 163 (250)
T 3esu_F 84 EDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSS 163 (250)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGS
T ss_pred hhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCC
Confidence 999999999999866532 234566654310 111222233334478999999999999877 78
Q ss_pred eeEEEEC--CEEcC----------------------------CCCeeEEEECCCCceeeEEEEEEEEe
Q psy16863 877 TLKWFKD--GRELK----------------------------AGDIHKIISGEDGTCCLGIYTCEAHN 914 (1075)
Q Consensus 877 ~v~W~k~--g~~l~----------------------------~~~~~~i~~~~~~~~d~G~Y~C~a~N 914 (1075)
.+.|||+ |..+. .+....|.+......|+|.|.|.|.|
T Consensus 164 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 164 WMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 9999997 54331 02233577888888999999999998
No 268
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.70 E-value=2.7e-16 Score=164.64 Aligned_cols=165 Identities=15% Similarity=0.238 Sum_probs=120.5
Q ss_pred eeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECC--Ee---c---------CCCCcEEEEEcCCEEEEEEcccCCCC
Q psy16863 351 AFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRND--RK---L---------EENKIYRTQHDGNFYFIDLSSVSLFD 416 (1075)
Q Consensus 351 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g--~~---l---------~~~~~~~~~~~g~~~~L~I~~v~~~d 416 (1075)
.+...+..+.+.+|++++|.|.+.+.|.+.|.|||++ .. + ....++.+...+....|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHH
Confidence 3555677789999999999999998888999999953 11 1 11356776666777789999999999
Q ss_pred ceeEEEEEEeCCCce-eeEEEEEeecCCC---------CCCCeeeeecceEEecCCeEEEEEEEECCC--CCeEEEEeC-
Q psy16863 417 SGRWTCLAENAVGRS-HCSCELSVLVPKA---------YKAPFFTKELEAILTEQGTVSLECKVMGIP--TPQLIWYKD- 483 (1075)
Q Consensus 417 ~G~Y~C~a~n~~g~~-~~s~~l~V~~~~~---------~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~v~W~~~- 483 (1075)
+|.|.|.|.|..+.. .....|.|..++. ..++.+..+....+.+|++++|.|.+.+.| .+.+.|+|+
T Consensus 83 ~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~ 162 (242)
T 2znx_A 83 FGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKF 162 (242)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred CEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeC
Confidence 999999999975432 2345677776542 111233343445688999999999999876 478999994
Q ss_pred -CEecc---------------------------CCCEEEEEeCCCCCCCcEEEEEEEEec
Q psy16863 484 -NKKIK---------------------------AGDIFALTANPKDPSSLGTYTCEAVNC 515 (1075)
Q Consensus 484 -g~~l~---------------------------~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 515 (1075)
+..+. .+....|.|.++..+|+|.|+|.|.|.
T Consensus 163 ~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 163 PGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp TTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred CCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 22220 123457999999999999999999983
No 269
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.70 E-value=1.4e-16 Score=168.55 Aligned_cols=172 Identities=14% Similarity=0.194 Sum_probs=122.6
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecC--CCCeEEEEECC--EE---ee--------------cCCcEEEEEee-CcE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSIS--PEPKVSWFRDD--QQ---VV--------------ESDNVKILKET-LGV 804 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~--p~p~v~W~k~g--~~---i~--------------~~~~~~~~~~~-~~~ 804 (1075)
.+|.|...+..+.+.+|++++|.|.+.+. |.+.+.|||.. .. +. ...++.+..+. .+.
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 46778888889999999999999999984 67899999842 11 10 12466665432 456
Q ss_pred EEEEEccccCCCCeEEEEEEEeC------------CceEEEEEEEEEEecCCCC----------CCeeeeecce-eecCC
Q psy16863 805 CHLKIHALEVADQAEWKCIATND------------FGQSITSCFLKLNVPKHYK----------KPKFLEELKA-VLSEG 861 (1075)
Q Consensus 805 ~~L~I~~~~~~D~G~Y~C~A~N~------------~G~~~~s~~l~V~~~~~~~----------~p~~~~~~~~-~~~~g 861 (1075)
+.|+|.+++.+|+|.|.|.|.|. .+.......|.|..++... +|.+...+.. .+.+|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 78999999999999999999997 3333335567776543211 3444444443 47899
Q ss_pred CeEEEEEEEEccCC-CeeEEEEC--CEEcC---------------------CCCeeEEEECCCCceeeEEEEEEEEeCCe
Q psy16863 862 GAVNLECKVIGVPQ-PTLKWFKD--GRELK---------------------AGDIHKIISGEDGTCCLGIYTCEAHNCMG 917 (1075)
Q Consensus 862 ~~~~L~C~v~g~p~-p~v~W~k~--g~~l~---------------------~~~~~~i~~~~~~~~d~G~Y~C~a~N~~G 917 (1075)
++++|.|.+.+.|. +.+.|||. |..+. .+....|.+......|+|.|.|.|.|..+
T Consensus 165 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 165 ERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp SCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 99999999999887 89999982 32211 12234578888888999999999999654
Q ss_pred e
Q psy16863 918 T 918 (1075)
Q Consensus 918 ~ 918 (1075)
.
T Consensus 245 ~ 245 (256)
T 3juy_B 245 Y 245 (256)
T ss_dssp C
T ss_pred c
Confidence 3
No 270
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.70 E-value=2.5e-16 Score=166.06 Aligned_cols=165 Identities=13% Similarity=0.249 Sum_probs=120.9
Q ss_pred CeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECC-----Ee---------cCCCCcEEEEEcCCEEEEEEcccCCC
Q psy16863 350 PAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRND-----RK---------LEENKIYRTQHDGNFYFIDLSSVSLF 415 (1075)
Q Consensus 350 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g-----~~---------l~~~~~~~~~~~g~~~~L~I~~v~~~ 415 (1075)
+.+...+..+.+.+|++++|.|.+.+.|.+.+.|||++ .. .....++.....+....|.|.+++.+
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 84 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQE 84 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChh
Confidence 44555667788999999999999999998999999953 11 11235677777777788999999999
Q ss_pred CceeEEEEEEeCCCce-eeEEEEEeecCCC---------------CCCCeeeeecceEEecCCeEEEEEEEECCC--CCe
Q psy16863 416 DSGRWTCLAENAVGRS-HCSCELSVLVPKA---------------YKAPFFTKELEAILTEQGTVSLECKVMGIP--TPQ 477 (1075)
Q Consensus 416 d~G~Y~C~a~n~~g~~-~~s~~l~V~~~~~---------------~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~ 477 (1075)
|+|.|.|.|.|..+.. .....|.|..++. ..++.+..+....+.+|++++|.|.+.+.| .+.
T Consensus 85 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~ 164 (250)
T 3esu_F 85 DIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSW 164 (250)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSE
T ss_pred hCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCE
Confidence 9999999999876543 2345677765320 112233334444588999999999999877 779
Q ss_pred EEEEeC--CEecc----------------------------CCCEEEEEeCCCCCCCcEEEEEEEEe
Q psy16863 478 LIWYKD--NKKIK----------------------------AGDIFALTANPKDPSSLGTYTCEAVN 514 (1075)
Q Consensus 478 v~W~~~--g~~l~----------------------------~~~~~~l~i~~~~~~d~G~Y~C~a~n 514 (1075)
+.|+|+ +..+. ......|.|.++..+|+|.|+|.|.|
T Consensus 165 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 165 MNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 999997 43321 12344799999999999999999997
No 271
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.70 E-value=7.2e-18 Score=172.94 Aligned_cols=162 Identities=15% Similarity=0.238 Sum_probs=118.0
Q ss_pred cCceeeccCCeEEEEEEEecCCCcEEEEEEC--CEecC------------CCCcEEEEEcCCEEEEEEcccCCCCceeEE
Q psy16863 356 LHDIAVKVGTRARLLVEIRSPTEIKIHWYRN--DRKLE------------ENKIYRTQHDGNFYFIDLSSVSLFDSGRWT 421 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~--g~~l~------------~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~ 421 (1075)
+..+.+.+|++++|.|.+.+.|.+.|.|||+ |..+. ...++.+...+....|.|.+++.+|+|.|+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 5677899999999999998877778999995 33221 135677776777788999999999999999
Q ss_pred EEEEeCCC-ce--eeEEEEEeecCCCCCCCeeee-ecceEEecCCeEEEEEEEECC-CC-CeEEEEeCCEeccCCCE---
Q psy16863 422 CLAENAVG-RS--HCSCELSVLVPKAYKAPFFTK-ELEAILTEQGTVSLECKVMGI-PT-PQLIWYKDNKKIKAGDI--- 492 (1075)
Q Consensus 422 C~a~n~~g-~~--~~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~v~l~C~~~g~-p~-~~v~W~~~g~~l~~~~~--- 492 (1075)
|.|.|..+ .. .....|.|...+. .+|.+.. .....+.+|+.+.|.|.+.|. |+ +.|+|+|+|+++..+..
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~-~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~ 164 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPK-SSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTK 164 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCC-BCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCC
T ss_pred EEEEcccCcccccCCceEEEEccCCC-CCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCC
Confidence 99997322 21 2234566654332 2344433 222224578999999999987 55 79999999999864321
Q ss_pred -------E----EEEeCCCCCCCcEEEEEEEEeccee
Q psy16863 493 -------F----ALTANPKDPSSLGTYTCEAVNCMGA 518 (1075)
Q Consensus 493 -------~----~l~i~~~~~~d~G~Y~C~a~n~~g~ 518 (1075)
+ .|.|..+..+|+|.|+|.|.|..+.
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 165 PSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp CBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred ceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 2 3667777788999999999998654
No 272
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.70 E-value=3.2e-17 Score=168.44 Aligned_cols=171 Identities=17% Similarity=0.179 Sum_probs=106.8
Q ss_pred CCCeEEeccceee--eecCCeEEEEEEEecC---CC-CeEEEEECCEEeecCCcEEEEEeeC----cEEEEEEccccCCC
Q psy16863 747 KAPKFIEGLKSCQ--ATVNEEFKFTVQVSIS---PE-PKVSWFRDDQQVVESDNVKILKETL----GVCHLKIHALEVAD 816 (1075)
Q Consensus 747 ~~p~~~~~~~~~~--~~~g~~~~l~C~v~g~---p~-p~v~W~k~g~~i~~~~~~~~~~~~~----~~~~L~I~~~~~~D 816 (1075)
.+|.+...+.... +.+|++++|.|.+.|. |. +.|+|+|+|..+............. ....|.|.+++.+|
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 3555544333333 7899999999999987 43 7999999998875432111111111 13479999999999
Q ss_pred CeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeec-ceeecCCCeEEEEEEEEc-cCCC-eeEEEECCEEcCCCCee
Q psy16863 817 QAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEEL-KAVLSEGGAVNLECKVIG-VPQP-TLKWFKDGRELKAGDIH 893 (1075)
Q Consensus 817 ~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~~~L~C~v~g-~p~p-~v~W~k~g~~l~~~~~~ 893 (1075)
+|.|+|.|.|..+.......+.. ......+|.+.... .....+|+.++|.|.+.| .|.+ .|+|+|||.++......
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~-~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~ 166 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISK-IKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDT 166 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECC-CCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEEC
T ss_pred CCeEEEEEECCcCCCcceEEEee-cCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceec
Confidence 99999999999875411222211 01112344443221 112235899999999999 5665 89999999987532111
Q ss_pred EEEECCCC--------------ceeeEEEEEEEEeCCee
Q psy16863 894 KIISGEDG--------------TCCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 894 ~i~~~~~~--------------~~d~G~Y~C~a~N~~G~ 918 (1075)
......++ ..|.|.|+|.|.|....
T Consensus 167 ~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 167 APVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred ccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 11111111 12479999999997653
No 273
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.70 E-value=3.5e-16 Score=165.09 Aligned_cols=182 Identities=14% Similarity=0.164 Sum_probs=128.7
Q ss_pred ccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCC--Ccc-----------------ccCCCeEEEee--CC
Q psy16863 248 RLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQG--DHP-----------------IFGNRFRAINR--DG 306 (1075)
Q Consensus 248 ~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~--~~~-----------------~~~~~~~~~~~--~~ 306 (1075)
.+..+.+.+|+.++|.|.+.+.+. +...+.|++.+ ..+ ....++.+..+ ++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~~~--------~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 77 (256)
T 1nqb_A 6 QSGAELVKPGASVKLSCKASGYTF--------TSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSS 77 (256)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCG--------GGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTT
T ss_pred CCCCeeecCCCcEEEEEEeccccC--------CCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCC
Confidence 345677899999999999865320 12234444321 100 01357776654 45
Q ss_pred eEEEEEcccCCCCCEEEEEEEEeCCee-----EEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCc--
Q psy16863 307 RTELNIRRVRRDDGGRYSVTASNESGY-----STAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEI-- 379 (1075)
Q Consensus 307 ~~~L~I~~~~~~d~G~Y~C~a~n~~g~-----~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~-- 379 (1075)
..+|+|.+++.+|+|.|.|.|.|..|. ....+.|.|.. +|.+...+....+.+|++++|.|.+.+.|.+
T Consensus 78 ~~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~----~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~ 153 (256)
T 1nqb_A 78 TAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSS----DIELTQTPLSLPVSLGDQASISCRSSQSIVHSN 153 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECC----CCCEEEECSEEEECTTCCEEEEEEESSCCBCTT
T ss_pred EEEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecc----cccEEecCcEEEEecCCcEEEEeEecCcccccc
Confidence 679999999999999999999998652 23345677763 5667777778889999999999999887754
Q ss_pred ---EEEEEE--CCEecC------------CCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCce-eeEEEEEeec
Q psy16863 380 ---KIHWYR--NDRKLE------------ENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRS-HCSCELSVLV 441 (1075)
Q Consensus 380 ---~v~W~k--~g~~l~------------~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~-~~s~~l~V~~ 441 (1075)
.|.||| +|..+. ...++.....+....|.|.+++.+|+|.|+|.|.|..... .....|.|..
T Consensus 154 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 154 GNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp SCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred cceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 999999 665431 1356666666777789999999999999999999854322 2234566643
No 274
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.70 E-value=4e-16 Score=160.97 Aligned_cols=167 Identities=11% Similarity=0.211 Sum_probs=115.7
Q ss_pred ceeeeecCCeEEEEEEEecCC--CCeEEEEECC--E---Eee--------------cCCcEEEEEee-CcEEEEEEcccc
Q psy16863 756 KSCQATVNEEFKFTVQVSISP--EPKVSWFRDD--Q---QVV--------------ESDNVKILKET-LGVCHLKIHALE 813 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~---~i~--------------~~~~~~~~~~~-~~~~~L~I~~~~ 813 (1075)
....+.+|++++|.|.+.+.| .+.+.|||.+ . .+. ...|+.+..+. .+.+.|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 356788999999999999876 4789999853 2 121 12467665442 346799999999
Q ss_pred CCCCeEEEEEEEeCCc----e--EEEEEEEEEEecCCCCCCeee-eecceeecCCCeEEEEEEEEcc-CCC-eeEEEE-C
Q psy16863 814 VADQAEWKCIATNDFG----Q--SITSCFLKLNVPKHYKKPKFL-EELKAVLSEGGAVNLECKVIGV-PQP-TLKWFK-D 883 (1075)
Q Consensus 814 ~~D~G~Y~C~A~N~~G----~--~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~~~L~C~v~g~-p~p-~v~W~k-~ 883 (1075)
.+|+|.|.|.+.|..| . ......|.|...+ ..+|.+. ......+.+|+.++|.|.+.|. |.| .|+|+| |
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (223)
T 1dee_B 88 AEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGS-ASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKN 166 (223)
T ss_dssp GGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSC-CBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred HHHCEEEEEEEeccccCcccceeecCcEEEEEccCC-CCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccC
Confidence 9999999999999754 1 1123467776321 1344433 2222235689999999999987 777 999999 9
Q ss_pred CEEcCC---------CCee----EEEECCCCc--eeeEEEEEEEEeCCeeEEEEE
Q psy16863 884 GRELKA---------GDIH----KIISGEDGT--CCLGIYTCEAHNCMGTTSSSA 923 (1075)
Q Consensus 884 g~~l~~---------~~~~----~i~~~~~~~--~d~G~Y~C~a~N~~G~~~~~~ 923 (1075)
|.+|.. +..+ .|.+..... .|.|.|+|.|.|..|......
T Consensus 167 g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 167 NSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp SCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred CCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 988753 1222 233333332 568999999999999876543
No 275
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.70 E-value=2.9e-17 Score=167.29 Aligned_cols=167 Identities=20% Similarity=0.200 Sum_probs=104.9
Q ss_pred eEEeccceee-eecCCeEEEEEEEecCC----CCeEEEEECCEEeecCCc-EEEEEee---CcEEEEEEccccCCCCeEE
Q psy16863 750 KFIEGLKSCQ-ATVNEEFKFTVQVSISP----EPKVSWFRDDQQVVESDN-VKILKET---LGVCHLKIHALEVADQAEW 820 (1075)
Q Consensus 750 ~~~~~~~~~~-~~~g~~~~l~C~v~g~p----~p~v~W~k~g~~i~~~~~-~~~~~~~---~~~~~L~I~~~~~~D~G~Y 820 (1075)
.++.++.... +.+|+++.|.|.+.|.| .+.|+|+|++..+..... +...... .....|.|.+++.+|+|.|
T Consensus 4 v~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 83 (207)
T 2vol_A 4 VFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEF 83 (207)
T ss_dssp EEEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCE
T ss_pred EEEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEE
Confidence 3444444444 78999999999999884 349999999987653210 0000000 0134799999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecc-eeecCCCeEEEEEEEEcc-CC-CeeEEEECCEEcCCCCeeEEEE
Q psy16863 821 KCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELK-AVLSEGGAVNLECKVIGV-PQ-PTLKWFKDGRELKAGDIHKIIS 897 (1075)
Q Consensus 821 ~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~-p~-p~v~W~k~g~~l~~~~~~~i~~ 897 (1075)
+|.|.|..|.......+.+. .....+|.+..... ....+|+.++|.|.+.|. |+ +.|+|+|||.++..........
T Consensus 84 ~C~a~~~~~~~~~~~~v~~~-~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~ 162 (207)
T 2vol_A 84 KCRVNSAAFPAPIEKTISKT-KGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIM 162 (207)
T ss_dssp EEEEECTTCSSCEEEEECCC-CCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEE
T ss_pred EEEEEccCCCCceEEEeccC-CCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceE
Confidence 99999998864222233220 01123444432211 112358999999999985 44 3899999999885422111111
Q ss_pred CCCC--------------ceeeEEEEEEEEeCCe
Q psy16863 898 GEDG--------------TCCLGIYTCEAHNCMG 917 (1075)
Q Consensus 898 ~~~~--------------~~d~G~Y~C~a~N~~G 917 (1075)
..++ ..|.|.|+|.|.|...
T Consensus 163 ~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 163 DTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp CTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred CCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 1221 1357999999999764
No 276
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.70 E-value=7.5e-17 Score=143.17 Aligned_cols=96 Identities=23% Similarity=0.355 Sum_probs=89.5
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.||.|+..+.++.+.+|+++.|.|.+.|.|.+.|+|+|||..|..+.++.+..++..+.|.|.+++.+|+|.|+|.|.|.
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEEC
Confidence 47899999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred CCceeeEEEEEeecCC
Q psy16863 428 VGRSHCSCELSVLVPK 443 (1075)
Q Consensus 428 ~g~~~~s~~l~V~~~~ 443 (1075)
.|....++.|.|..+|
T Consensus 92 ~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 92 AGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TEEEEEEEEEEEEC--
T ss_pred CCEEEEEEEEEEEcCC
Confidence 9999999999998654
No 277
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.70 E-value=1.4e-16 Score=164.40 Aligned_cols=167 Identities=14% Similarity=0.212 Sum_probs=115.4
Q ss_pred ceeeeecCCeEEEEEEEecCC--CCeEEEEECC--EE---ee---c-------------CCcEEEEEee-CcEEEEEEcc
Q psy16863 756 KSCQATVNEEFKFTVQVSISP--EPKVSWFRDD--QQ---VV---E-------------SDNVKILKET-LGVCHLKIHA 811 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~~---i~---~-------------~~~~~~~~~~-~~~~~L~I~~ 811 (1075)
....+.+|+++.|.|.+.+.| .+.+.|+|++ .. +. . ..++.+..+. .+...|.|.+
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (220)
T 1pz5_B 8 GGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNN 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEcc
Confidence 445788999999999999877 7899999963 21 10 0 2567665432 3567899999
Q ss_pred ccCCCCeEEEEEEEeCCceE-E--EEEEEEEEecCCCCCCeeee-ecceeecCCCeEEEEEEEEcc-CCC-eeEEEECCE
Q psy16863 812 LEVADQAEWKCIATNDFGQS-I--TSCFLKLNVPKHYKKPKFLE-ELKAVLSEGGAVNLECKVIGV-PQP-TLKWFKDGR 885 (1075)
Q Consensus 812 ~~~~D~G~Y~C~A~N~~G~~-~--~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~~~L~C~v~g~-p~p-~v~W~k~g~ 885 (1075)
++.+|+|.|.|.|.|..|.. . ..+.|.|...+ ..+|.+.. .....+.+|+.++|.|.+.|. |.| .|+|+|+|.
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 166 (220)
T 1pz5_B 88 LRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSAT-TTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 166 (220)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC-CBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred CCHHHCEEEEEEEecCCcccceECCCEEEEEccCC-CCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCc
Confidence 99999999999999986532 1 24566666422 23444432 212235689999999999998 888 999999986
Q ss_pred E-----cCC---CCee----EEEECCCCceeeEEEEEEEEeCCeeEEEEEE
Q psy16863 886 E-----LKA---GDIH----KIISGEDGTCCLGIYTCEAHNCMGTTSSSAA 924 (1075)
Q Consensus 886 ~-----l~~---~~~~----~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~ 924 (1075)
. +.. ...+ .|.+......| |.|+|.|.|.+|..+.++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 167 SSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred ccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 3 110 1221 23444333334 9999999999998766543
No 278
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.70 E-value=4.9e-16 Score=166.25 Aligned_cols=167 Identities=13% Similarity=0.255 Sum_probs=122.2
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCE-----ec---------CCCCcEEEEEcCCEEEEEEcccCC
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDR-----KL---------EENKIYRTQHDGNFYFIDLSSVSL 414 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~-----~l---------~~~~~~~~~~~g~~~~L~I~~v~~ 414 (1075)
.+.+...+..+.+.+|++++|.|.+.+.|.+.|.|||++. .+ ....++.+..++....|.|.+++.
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 4556667788899999999999999998889999999642 12 123577777677778899999999
Q ss_pred CCceeEEEEEEeCCCc-eeeEEEEEeecCCC---------CCCC-eeeeecceEEecCCeEEEEEEEECCC--CCeEEEE
Q psy16863 415 FDSGRWTCLAENAVGR-SHCSCELSVLVPKA---------YKAP-FFTKELEAILTEQGTVSLECKVMGIP--TPQLIWY 481 (1075)
Q Consensus 415 ~d~G~Y~C~a~n~~g~-~~~s~~l~V~~~~~---------~~~p-~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~v~W~ 481 (1075)
+|+|.|.|.|.|..+. ....+.|.|..++. ..++ .+..+....+.+|++++|.|.+.|.| .+.+.|+
T Consensus 92 ~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~ 171 (276)
T 3auv_A 92 EDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWV 171 (276)
T ss_dssp GGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEE
T ss_pred hhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEE
Confidence 9999999999997654 22345677766532 1112 23333344588999999999999877 4799999
Q ss_pred eCC--Eecc----------------------------CCCEEEEEeCCCCCCCcEEEEEEEEec
Q psy16863 482 KDN--KKIK----------------------------AGDIFALTANPKDPSSLGTYTCEAVNC 515 (1075)
Q Consensus 482 ~~g--~~l~----------------------------~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 515 (1075)
|++ ..+. ......|.|.++..+|+|.|+|.|.|.
T Consensus 172 k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 172 RQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp EECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 963 2110 012347999999999999999999997
No 279
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.69 E-value=3.8e-16 Score=165.38 Aligned_cols=171 Identities=14% Similarity=0.166 Sum_probs=117.8
Q ss_pred CeEEeccceeeeecCCeEEEEEEEecC--CCCeEEEEECC--E---Ee-------------ecCCcEEEEEee-CcEEEE
Q psy16863 749 PKFIEGLKSCQATVNEEFKFTVQVSIS--PEPKVSWFRDD--Q---QV-------------VESDNVKILKET-LGVCHL 807 (1075)
Q Consensus 749 p~~~~~~~~~~~~~g~~~~l~C~v~g~--p~p~v~W~k~g--~---~i-------------~~~~~~~~~~~~-~~~~~L 807 (1075)
+..+..+....+.+|++++|.|.+.+. |.+.+.|||.. . .+ ....++.+..+. .+.+.|
T Consensus 9 ~v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 88 (257)
T 3gkz_A 9 EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYL 88 (257)
T ss_dssp CEEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEE
T ss_pred cEEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEE
Confidence 334445566779999999999999984 47899999932 1 11 012466665432 457789
Q ss_pred EEccccCCCCeEEEEEEEeCC----ceEEEEEEEEEEecCC---------CCCCeeeeecc-eeecCCCeEEEEEEEEcc
Q psy16863 808 KIHALEVADQAEWKCIATNDF----GQSITSCFLKLNVPKH---------YKKPKFLEELK-AVLSEGGAVNLECKVIGV 873 (1075)
Q Consensus 808 ~I~~~~~~D~G~Y~C~A~N~~----G~~~~s~~l~V~~~~~---------~~~p~~~~~~~-~~~~~g~~~~L~C~v~g~ 873 (1075)
.|.+++.+|+|.|+|.|.|.. +.......|.|..++. ...|.+...+. ..+.+|++++|.|.+.+.
T Consensus 89 ~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 168 (257)
T 3gkz_A 89 QLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSS 168 (257)
T ss_dssp EECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSC
T ss_pred EECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccC
Confidence 999999999999999999972 2222345677765411 12344444433 347899999999999998
Q ss_pred CCC-eeEEEEC--CEEcC---------------------CCCeeEEEECCCCceeeEEEEEEEEeCCeeE
Q psy16863 874 PQP-TLKWFKD--GRELK---------------------AGDIHKIISGEDGTCCLGIYTCEAHNCMGTT 919 (1075)
Q Consensus 874 p~p-~v~W~k~--g~~l~---------------------~~~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~ 919 (1075)
|.+ .+.|||+ |..+. .+....|.+......|+|.|.|.|.|.....
T Consensus 169 ~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~ 238 (257)
T 3gkz_A 169 VSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFT 238 (257)
T ss_dssp CCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCE
T ss_pred ccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceE
Confidence 887 8999993 33221 1123457788888899999999999865433
No 280
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.69 E-value=2.1e-16 Score=162.62 Aligned_cols=163 Identities=13% Similarity=0.190 Sum_probs=115.2
Q ss_pred eeeeecCCeEEEEEEEecCC--CCeEEEEECC--E---Eee--------------cCCcEEEEEe-eCcEEEEEEccccC
Q psy16863 757 SCQATVNEEFKFTVQVSISP--EPKVSWFRDD--Q---QVV--------------ESDNVKILKE-TLGVCHLKIHALEV 814 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~---~i~--------------~~~~~~~~~~-~~~~~~L~I~~~~~ 814 (1075)
...+.+|++++|.|.+.+.| .+.+.|||.. . .+. ...|+.+..+ ..+...|+|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (220)
T 2fbj_H 9 GGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRS 88 (220)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCG
T ss_pred CeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCCh
Confidence 46688999999999999876 6799999853 2 111 1246766543 23567999999999
Q ss_pred CCCeEEEEEEEeCCceE---EEEEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEcc-CC--CeeEEEECCEEcC
Q psy16863 815 ADQAEWKCIATNDFGQS---ITSCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGV-PQ--PTLKWFKDGRELK 888 (1075)
Q Consensus 815 ~D~G~Y~C~A~N~~G~~---~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~-p~--p~v~W~k~g~~l~ 888 (1075)
+|+|.|.|.+.|..+.. .....|.|..++ ..+|.+.......+.+|+.++|.|.+.|. |. +.|+|+|+|..+.
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~-~~~P~v~~~~~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~ 167 (220)
T 2fbj_H 89 EDTALYYCARLHYYGYNAYWGQGTLVTVSAES-ARNPTIYPLTLPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDIT 167 (220)
T ss_dssp GGCEEEEEEEEETTTEEEEECCCEEEEECSSC-CBCCEEEEECCCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCE
T ss_pred hhCEEEEEEEeccccccceecCCEEEEecCCC-CCCCEEEEeecccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecc
Confidence 99999999999986531 123567776432 23455433222235689999999999987 76 7999999997651
Q ss_pred ---------CCCeeE----EEECCCCceeeEEEEEEEEeCCeeEE
Q psy16863 889 ---------AGDIHK----IISGEDGTCCLGIYTCEAHNCMGTTS 920 (1075)
Q Consensus 889 ---------~~~~~~----i~~~~~~~~d~G~Y~C~a~N~~G~~~ 920 (1075)
.+..+. |.+......|.|.|+|.|.|..|+..
T Consensus 168 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 168 TVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp EEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred eEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 122222 44444444578999999999999865
No 281
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.69 E-value=4.1e-16 Score=154.86 Aligned_cols=120 Identities=15% Similarity=0.234 Sum_probs=94.6
Q ss_pred eeeecCCeEEEEEEEecCCCC--eEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEEE
Q psy16863 758 CQATVNEEFKFTVQVSISPEP--KVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITSC 835 (1075)
Q Consensus 758 ~~~~~g~~~~l~C~v~g~p~p--~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~ 835 (1075)
+.+..|++++|.|.+ +.|.| .|+|++.+..+ .+... ..+...|.|.+++.+|+|.|.|.|.|..|....++
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~---~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~ 89 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQS---DTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTV 89 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEE---ESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEe---cCCccEEEECccCcccCceEEEEEEeCCCceEEEE
Confidence 578999999999999 89888 99999966544 22222 23456899999999999999999999999988889
Q ss_pred EEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEcc-CC----CeeEEEECCEEcCCC
Q psy16863 836 FLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGV-PQ----PTLKWFKDGRELKAG 890 (1075)
Q Consensus 836 ~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~-p~----p~v~W~k~g~~l~~~ 890 (1075)
.|.|..+|.. +.. .. ..+.+|+.+ |.|.+.|. |. ++|+|||||.+|...
T Consensus 90 ~ltV~~~P~~--~~i-~~--~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~ 143 (210)
T 1gsm_A 90 QLLVYAFPNQ--LTV-SP--AALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGA 143 (210)
T ss_dssp EEEEEBCCSE--EEE-ES--SSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTC
T ss_pred EEEEEecCCC--cEE-cc--ceEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccc
Confidence 9999876532 111 11 245678888 99999986 64 489999999999643
No 282
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.69 E-value=1.1e-16 Score=162.43 Aligned_cols=161 Identities=14% Similarity=0.233 Sum_probs=113.0
Q ss_pred ceeeccCCeEEEEEEEec----CCCcEEEEEECCEecCC------------CCcEEEEEcCCEEEEEEcccCCCCceeEE
Q psy16863 358 DIAVKVGTRARLLVEIRS----PTEIKIHWYRNDRKLEE------------NKIYRTQHDGNFYFIDLSSVSLFDSGRWT 421 (1075)
Q Consensus 358 ~~~v~~G~~v~l~C~~~g----~p~~~v~W~k~g~~l~~------------~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~ 421 (1075)
.+.+.+|+++.|.|.+.+ .|.+.+.|+|++..+.. ..+..+...+ ...|.|.+++.+|+|.|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~-~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITN-NLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTT-TTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCC-CcEEEEecccchhCeEEE
Confidence 467889999999999853 35679999999987621 1233322222 235999999999999999
Q ss_pred EEEEeCCCcee-----eEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEE-CCCCCeEEEEeCCEeccCCC----
Q psy16863 422 CLAENAVGRSH-----CSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVM-GIPTPQLIWYKDNKKIKAGD---- 491 (1075)
Q Consensus 422 C~a~n~~g~~~-----~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~v~W~~~g~~l~~~~---- 491 (1075)
|.|.|..|... ....|.|..+ ...|.+.... ...|+.+.|.|.+. |.|.|.|+|+|+|+.+....
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~--~~~p~~~~~~---~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~ 156 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKAD--FPTPSISDFE---IPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVS 156 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECC--CCCCEEEEEE---CSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEE
T ss_pred EEEEcCCCCccccccccEEEEEEcCC--CCCCceEecc---CCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEE
Confidence 99999877653 3455555543 2334433221 24588999999995 99999999999999886432
Q ss_pred ------EEEE-EeCCCCCCCcEEEEEEEEecceeeEEEEE
Q psy16863 492 ------IFAL-TANPKDPSSLGTYTCEAVNCMGAAFSTSR 524 (1075)
Q Consensus 492 ------~~~l-~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 524 (1075)
.+.+ .+..+...|.|.|+|.|.|..|.....+.
T Consensus 157 ~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 157 QDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp ECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEE
T ss_pred ecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEe
Confidence 1111 11223457899999999999998766554
No 283
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.69 E-value=3.4e-17 Score=169.36 Aligned_cols=171 Identities=20% Similarity=0.264 Sum_probs=122.0
Q ss_pred CceeeccCCeEEEEEEEecCCC-----cEEEEEECCEec-------------CCCCcEEEEEc---CCEEEEEEcccCCC
Q psy16863 357 HDIAVKVGTRARLLVEIRSPTE-----IKIHWYRNDRKL-------------EENKIYRTQHD---GNFYFIDLSSVSLF 415 (1075)
Q Consensus 357 ~~~~v~~G~~v~l~C~~~g~p~-----~~v~W~k~g~~l-------------~~~~~~~~~~~---g~~~~L~I~~v~~~ 415 (1075)
..+.+.+|++++|.|.+.+.|. +.|.|+|++... ....++.+..+ .....|.|.+++.+
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 3467889999999999987654 799999987433 11223332221 11345999999999
Q ss_pred CceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEE-ECCCCCeEEEEe-CCEeccCCC--
Q psy16863 416 DSGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKV-MGIPTPQLIWYK-DNKKIKAGD-- 491 (1075)
Q Consensus 416 d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~v~W~~-~g~~l~~~~-- 491 (1075)
|+|.|+|.+.|. +.......|.|..++ ..|.+.......+.+|+.+.|.|.+ .|.|.+.+.|++ ++..+....
T Consensus 83 D~G~Y~C~~~~~-~~~~~~~~l~V~~~~--~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~ 159 (222)
T 4i0k_A 83 DEGSYTCFVSIQ-DFDSAAVSLQVAAPY--SKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTT 159 (222)
T ss_dssp GCSCEEEEEEEC-CCCCCCCCCCCCBCC--CCCEEECCC-----CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEE
T ss_pred cCEEEEEEEEeC-CCceEEEEEEEEcCC--CCCcEEeCCCceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcce
Confidence 999999999986 444455556665442 3455555554557789999999999 789999999999 555543211
Q ss_pred ---------EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEecc
Q psy16863 492 ---------IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIARGQ 530 (1075)
Q Consensus 492 ---------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~~~ 530 (1075)
...|.+..+..+|+|.|+|.|.|..|....++.|.|.++
T Consensus 160 ~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 207 (222)
T 4i0k_A 160 SQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQ 207 (222)
T ss_dssp EEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC-
T ss_pred eEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCC
Confidence 123677778889999999999999999999999988753
No 284
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.69 E-value=1e-16 Score=165.81 Aligned_cols=162 Identities=15% Similarity=0.244 Sum_probs=112.1
Q ss_pred eeeeecCCeEEEEEEEecCC--CCeEEEEECC--EEee-----------------cCCcEEEEEee-CcEEEEEEccccC
Q psy16863 757 SCQATVNEEFKFTVQVSISP--EPKVSWFRDD--QQVV-----------------ESDNVKILKET-LGVCHLKIHALEV 814 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~~i~-----------------~~~~~~~~~~~-~~~~~L~I~~~~~ 814 (1075)
...+.+|++++|.|.+.+.| .+.+.|||++ ..+. ...++.+..+. .+...|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (225)
T 1op3_H 9 GGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRV 88 (225)
T ss_dssp CEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCCh
Confidence 45688999999999999877 7899999853 2110 12466665432 3567999999999
Q ss_pred CCCeEEEEEEEeCCc-----e---EEEEEEEEEEecCCCCCCeee-eecceeecCCCeEEEEEEEEcc-CCC-eeEEEEC
Q psy16863 815 ADQAEWKCIATNDFG-----Q---SITSCFLKLNVPKHYKKPKFL-EELKAVLSEGGAVNLECKVIGV-PQP-TLKWFKD 883 (1075)
Q Consensus 815 ~D~G~Y~C~A~N~~G-----~---~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~~~L~C~v~g~-p~p-~v~W~k~ 883 (1075)
+|+|.|.|.|.|..| . ......|.|...+. .+|.+. ......+.+|+.++|.|.+.|. |.| .|+|+||
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~-~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 167 (225)
T 1op3_H 89 EDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPAST-KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG 167 (225)
T ss_dssp GGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSC-BCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCTT
T ss_pred hhCEEEEEEEecCCCccccccceeecCCEEEecccCCC-cCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEecC
Confidence 999999999999875 2 11245777775321 234332 2222235689999999999987 776 9999999
Q ss_pred CEEcC---------CCCee----EEEECCCCceeeEEEEEEEEeCCeeEE
Q psy16863 884 GRELK---------AGDIH----KIISGEDGTCCLGIYTCEAHNCMGTTS 920 (1075)
Q Consensus 884 g~~l~---------~~~~~----~i~~~~~~~~d~G~Y~C~a~N~~G~~~ 920 (1075)
|..+. .+..+ .|.+......| |.|+|.|.|..+...
T Consensus 168 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 168 ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp SCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred CCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 97642 11222 23443343346 999999999877644
No 285
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.69 E-value=3.5e-16 Score=165.87 Aligned_cols=167 Identities=15% Similarity=0.220 Sum_probs=119.7
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCC------CCeEEEEEC--CEE---ee---------cCCcEEEEEeeCcEEEE
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISP------EPKVSWFRD--DQQ---VV---------ESDNVKILKETLGVCHL 807 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p------~p~v~W~k~--g~~---i~---------~~~~~~~~~~~~~~~~L 807 (1075)
.+.+...+..+.+.+|++++|.|.+.+.| .+.+.|||+ |.. +. ...++.+.. ..+...|
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~-~~~~~~L 83 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSG-SGTDFTL 83 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEec-CCCEEEE
Confidence 45666667778899999999999999888 689999995 321 11 135676654 3457799
Q ss_pred EEccccCCCCeEEEEEEEeCCceEE-EEEEEEEEecCC-------------C--CCCeeeeecceeecCCCeEEEEEEEE
Q psy16863 808 KIHALEVADQAEWKCIATNDFGQSI-TSCFLKLNVPKH-------------Y--KKPKFLEELKAVLSEGGAVNLECKVI 871 (1075)
Q Consensus 808 ~I~~~~~~D~G~Y~C~A~N~~G~~~-~s~~l~V~~~~~-------------~--~~p~~~~~~~~~~~~g~~~~L~C~v~ 871 (1075)
.|.+++.+|+|.|.|.|.|..+... ....|.|..++. . ..+.+.......+.+|++++|.|.+.
T Consensus 84 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~ 163 (264)
T 2gjj_A 84 TIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKAS 163 (264)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEE
T ss_pred EECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEe
Confidence 9999999999999999999865322 245778876531 0 11122233334578999999999999
Q ss_pred ccCC--CeeEEEEC--CEE---cC---------------C----------CCeeEEEECCCCceeeEEEEEEEEeC
Q psy16863 872 GVPQ--PTLKWFKD--GRE---LK---------------A----------GDIHKIISGEDGTCCLGIYTCEAHNC 915 (1075)
Q Consensus 872 g~p~--p~v~W~k~--g~~---l~---------------~----------~~~~~i~~~~~~~~d~G~Y~C~a~N~ 915 (1075)
+.|. +.|.|||+ |.. |. . +....|.+......|+|.|.|.|.|.
T Consensus 164 ~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 164 GYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp SSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 9874 78999996 321 10 0 12346777778889999999999995
No 286
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.69 E-value=2.9e-16 Score=166.24 Aligned_cols=159 Identities=16% Similarity=0.266 Sum_probs=113.8
Q ss_pred eeeeecCCeEEEEEEEecC--CCCeEEEEECC--EE---ee---------cCCcEEEEEeeCcEEEEEEccccCCCCeEE
Q psy16863 757 SCQATVNEEFKFTVQVSIS--PEPKVSWFRDD--QQ---VV---------ESDNVKILKETLGVCHLKIHALEVADQAEW 820 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v~g~--p~p~v~W~k~g--~~---i~---------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 820 (1075)
...+.+|++++|.|.+.+. |.+.+.|||++ .. +. ...++.+.. ..+.+.|.|.+++.+|+|.|
T Consensus 11 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~DsG~Y 89 (256)
T 3ux9_B 11 SVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSK-SGTSASLAITGLQSEDEADY 89 (256)
T ss_dssp EEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE-ETTEEEEEECSCCGGGCEEE
T ss_pred cEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEc-cCCEEEEEECCCChhhCEEE
Confidence 4678999999999999987 78899999952 21 11 234666643 34577999999999999999
Q ss_pred EEEEEeCCceEE---EEEEEEEEecCCCC----------------CCeeeeecceeecCCCeEEEEEEEEccC--CCeeE
Q psy16863 821 KCIATNDFGQSI---TSCFLKLNVPKHYK----------------KPKFLEELKAVLSEGGAVNLECKVIGVP--QPTLK 879 (1075)
Q Consensus 821 ~C~A~N~~G~~~---~s~~l~V~~~~~~~----------------~p~~~~~~~~~~~~g~~~~L~C~v~g~p--~p~v~ 879 (1075)
.|.|.|..|... ....|.|..++... .+.+.......+.+|++++|.|.+.+.| .+.+.
T Consensus 90 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 169 (256)
T 3ux9_B 90 YCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMS 169 (256)
T ss_dssp EEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEE
T ss_pred EEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEEE
Confidence 999999765322 24567776544211 2234444444578999999999999987 68999
Q ss_pred EEEC--CEEc------C----------------------CCCeeEEEECCCCceeeEEEEEEEEeCC
Q psy16863 880 WFKD--GREL------K----------------------AGDIHKIISGEDGTCCLGIYTCEAHNCM 916 (1075)
Q Consensus 880 W~k~--g~~l------~----------------------~~~~~~i~~~~~~~~d~G~Y~C~a~N~~ 916 (1075)
|||+ |..+ . .+....|.+......|+|.|+|.|.|..
T Consensus 170 W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 170 WVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 9996 4322 0 1234457788888899999999999963
No 287
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.69 E-value=6.2e-17 Score=168.90 Aligned_cols=164 Identities=16% Similarity=0.184 Sum_probs=117.7
Q ss_pred cCceeeccCCeEEEEEEEecCC-Cc-EEEEEECC--Eec------------CCCCcEEEEEcCCEEEEEEcccCCCCcee
Q psy16863 356 LHDIAVKVGTRARLLVEIRSPT-EI-KIHWYRND--RKL------------EENKIYRTQHDGNFYFIDLSSVSLFDSGR 419 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~p-~~-~v~W~k~g--~~l------------~~~~~~~~~~~g~~~~L~I~~v~~~d~G~ 419 (1075)
+..+.+.+|++++|.|.+.+.+ .+ .|.|||++ ..+ ....++.....+....|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 6677899999999999998754 34 79999963 222 11356666666677789999999999999
Q ss_pred EEEEEEeCCCc---eeeEEEEEeecCCCCCCCeeee-ecceEEecCCeEEEEEEEECCC-C-CeEEEEeCCEeccCCC--
Q psy16863 420 WTCLAENAVGR---SHCSCELSVLVPKAYKAPFFTK-ELEAILTEQGTVSLECKVMGIP-T-PQLIWYKDNKKIKAGD-- 491 (1075)
Q Consensus 420 Y~C~a~n~~g~---~~~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~v~l~C~~~g~p-~-~~v~W~~~g~~l~~~~-- 491 (1075)
|+|.|.|..+. ......|.|...+. .+|.+.. .......+|+.++|.|.+.|.+ + +.|+|+|||+++..+.
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~-~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~ 184 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPK-AAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVET 184 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCC-CCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEE
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCC-CCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccc
Confidence 99999998872 22234555643221 2333332 2222234688999999999854 3 3899999999885431
Q ss_pred -------------EEEEEeCCCCCCCcEEEEEEEEecceeeE
Q psy16863 492 -------------IFALTANPKDPSSLGTYTCEAVNCMGAAF 520 (1075)
Q Consensus 492 -------------~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 520 (1075)
...|.|.....+|+|.|+|.|.|..+...
T Consensus 185 ~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 226 (234)
T 2j6e_L 185 TKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVE 226 (234)
T ss_dssp CCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCC
T ss_pred cCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceE
Confidence 13577888888999999999999876543
No 288
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.69 E-value=1.4e-17 Score=168.67 Aligned_cols=143 Identities=15% Similarity=0.201 Sum_probs=102.0
Q ss_pred eccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEee
Q psy16863 361 VKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVL 440 (1075)
Q Consensus 361 v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~ 440 (1075)
+.+|++++|.|.+ |.+.|+|+|||..+... .+....|.|.+++.+|+|.|+|.+.+.. . ....|.|.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~-s--~~~~v~v~ 81 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQNK-S--KPLQVYYR 81 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-------ESSCCCEEEEEGGGCCEEEEEEESSSSC-C--CCEEEEEE
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-------CCCCCeEEeCCCCcCCCEEEEEEecCCC-C--eeEEEEEE
Confidence 4689999999998 67899999999887532 1122358899999999999999975532 2 22444444
Q ss_pred cC-------------------------C-CCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCC----
Q psy16863 441 VP-------------------------K-AYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAG---- 490 (1075)
Q Consensus 441 ~~-------------------------~-~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~---- 490 (1075)
.. . ...++.+...+..+..+|++++|.|. |.|.+.|+|+|+|..+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~ 159 (204)
T 1sy6_A 82 MGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDK 159 (204)
T ss_dssp C------------------------------------CCCCEEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCT
T ss_pred EeccccccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCc
Confidence 10 0 00012222222223348999999999 8899999999999988543
Q ss_pred ----CEEEEEeCCC-CCCCcEEEEEEEEeccee
Q psy16863 491 ----DIFALTANPK-DPSSLGTYTCEAVNCMGA 518 (1075)
Q Consensus 491 ----~~~~l~i~~~-~~~d~G~Y~C~a~n~~g~ 518 (1075)
....|.|.++ ..+|+|.|+|.|.|..|.
T Consensus 160 ~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~ 192 (204)
T 1sy6_A 160 NIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPE 192 (204)
T ss_dssp TEEEETTEEEETTCCHHHHCEEEEEEETTSCGG
T ss_pred eEecCCCEEEEeeCCccccCEEEEEEeccCCCC
Confidence 1236899999 999999999999999986
No 289
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.69 E-value=2.4e-16 Score=161.85 Aligned_cols=169 Identities=15% Similarity=0.188 Sum_probs=118.6
Q ss_pred eecCceeeccCCeEEEEEEEecC-------CCcEEEEEECCEec-----------------CCCCcEEEEEc--CCEEEE
Q psy16863 354 RRLHDIAVKVGTRARLLVEIRSP-------TEIKIHWYRNDRKL-----------------EENKIYRTQHD--GNFYFI 407 (1075)
Q Consensus 354 ~~~~~~~v~~G~~v~l~C~~~g~-------p~~~v~W~k~g~~l-----------------~~~~~~~~~~~--g~~~~L 407 (1075)
..+..+.+.+|++++|.|.+.+. +.+.+.|||++... ....++.+..+ .....|
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL 84 (214)
T 2zg1_A 5 QVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSL 84 (214)
T ss_dssp ECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCE
T ss_pred eCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEE
Confidence 34567789999999999999764 57899999987531 11235544332 223469
Q ss_pred EEcccCCCCceeEEEEEEeCCCcee----eEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECC----CCCeEE
Q psy16863 408 DLSSVSLFDSGRWTCLAENAVGRSH----CSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGI----PTPQLI 479 (1075)
Q Consensus 408 ~I~~v~~~d~G~Y~C~a~n~~g~~~----~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~----p~~~v~ 479 (1075)
.|.+++.+|+|.|.|.+.|..+... ....|.|..++. +|.+..+. .+.+|+.++|.|.+.+. |.|.++
T Consensus 85 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~--~p~i~~~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~ 160 (214)
T 2zg1_A 85 SIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIE--KPDIHFLE--PLESGRPTRLSCSLPGSCEAGPPLTFS 160 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCC--CCEEC--C--CCCTTCCEEEEEECTTCCSCSSCCEEE
T ss_pred EEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCC--CCceecCc--cccCCCeEEEEEEeccCCCCCCCceEE
Confidence 9999999999999999999864321 356677776432 34443322 26789999999999764 888999
Q ss_pred EEeCCEeccC---CCEEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEE
Q psy16863 480 WYKDNKKIKA---GDIFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVI 526 (1075)
Q Consensus 480 W~~~g~~l~~---~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~ 526 (1075)
|+|++..+.. .....|.|..+..+|+|.|+|.|.|..+....+..+.
T Consensus 161 W~~~~~~~~~~~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 161 WTGNALSPLDPETTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp EESSTTSSSCSSCCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred EeCCCCccCCCCceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 9999876432 2234788888989999999999999876554444443
No 290
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.68 E-value=1.6e-16 Score=139.20 Aligned_cols=93 Identities=14% Similarity=0.236 Sum_probs=82.9
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCC--cEEEEEeeCcEEEEEEccccCCCCeEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESD--NVKILKETLGVCHLKIHALEVADQAEWKCIA 824 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~--~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A 824 (1075)
.||.|...+.+..+.+|+.+.|.|.+.|.|.|.|+|+|||++|..+. ++.+... .+.+.|.|.+++.+|+|.|+|.|
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENT-DDLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEEC-SSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecc-cceEEEEEcCCCccCCEEEEEEE
Confidence 58899988999999999999999999999999999999999997654 5665543 45779999999999999999999
Q ss_pred EeCCceEEEEEEEEEE
Q psy16863 825 TNDFGQSITSCFLKLN 840 (1075)
Q Consensus 825 ~N~~G~~~~s~~l~V~ 840 (1075)
+|.+|.++.++.|.|+
T Consensus 83 ~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 83 GNEFGSDSATVNIHIR 98 (100)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EECCCEEEEEEEEEEE
Confidence 9999999989988886
No 291
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.68 E-value=8.4e-18 Score=175.33 Aligned_cols=168 Identities=15% Similarity=0.238 Sum_probs=95.1
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECC--EEe---e---------cCCcEEEEEeeCcEEEEEEcccc
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDD--QQV---V---------ESDNVKILKETLGVCHLKIHALE 813 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g--~~i---~---------~~~~~~~~~~~~~~~~L~I~~~~ 813 (1075)
.+.+...+....+.+|++++|.|.+.+.|.+.|.|+|++ ..+ . ...++.+.. ..+.+.|.|.+++
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~ 101 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSG-YGTDFVFTIENML 101 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCE-EEEEEEEC-----
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeec-cCCEEEEEECCCC
Confidence 455666677788999999999999999888899999853 211 0 123444332 2245689999999
Q ss_pred CCCCeEEEEEEEeCCceEEE-EEEEEEEecCCCCCCeeeeec-ceeecCCCeEEEEEEEEccCCC--eeEEEECCEEcCC
Q psy16863 814 VADQAEWKCIATNDFGQSIT-SCFLKLNVPKHYKKPKFLEEL-KAVLSEGGAVNLECKVIGVPQP--TLKWFKDGRELKA 889 (1075)
Q Consensus 814 ~~D~G~Y~C~A~N~~G~~~~-s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~~~L~C~v~g~p~p--~v~W~k~g~~l~~ 889 (1075)
.+|+|.|+|.|.|..+.... ...|.|..+. .+|.+.... ...+.+|+.++|.|.+.|.+++ .|+|+|||.++..
T Consensus 102 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~--~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~ 179 (233)
T 3bqu_C 102 SEDVADYYCLQSDNLPYTFGGGTNLEIKRAD--AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 179 (233)
T ss_dssp CCCCSEEEEEECSSSSCCBCCCCBC---CCC--BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----C
T ss_pred HHHCEEEEEEEecCCceeecCCEEEEEeCCC--CCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCC
Confidence 99999999999998764221 2345665422 245443322 1123468999999999986543 7999999998865
Q ss_pred CCe----------------eEEEECCCCceeeEEEEEEEEeCCee
Q psy16863 890 GDI----------------HKIISGEDGTCCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 890 ~~~----------------~~i~~~~~~~~d~G~Y~C~a~N~~G~ 918 (1075)
+.. ..|.+......|+|.|+|.|.|....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 180 GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp CEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred CceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 511 12233333345789999999997543
No 292
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.68 E-value=7e-16 Score=162.28 Aligned_cols=165 Identities=15% Similarity=0.228 Sum_probs=119.9
Q ss_pred eeeeecCceeeccCCeEEEEEEEecCC-----CcEEEEEECC--Ee---cC---------CCCcEEEEEcCCEEEEEEcc
Q psy16863 351 AFIRRLHDIAVKVGTRARLLVEIRSPT-----EIKIHWYRND--RK---LE---------ENKIYRTQHDGNFYFIDLSS 411 (1075)
Q Consensus 351 ~~~~~~~~~~v~~G~~v~l~C~~~g~p-----~~~v~W~k~g--~~---l~---------~~~~~~~~~~g~~~~L~I~~ 411 (1075)
.+...+..+.+.+|++++|.|.+.+.+ .+.+.|||++ .. +. ...++.+...+....|.|.+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 82 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR 82 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred cEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECC
Confidence 345566778999999999999998877 6899999953 21 10 13567776677777899999
Q ss_pred cCCCCceeEEEEEEeCCCce-eeEEEEEeecCCCC---------CCCeeeeecceEEecCCeEEEEEEEECCC--CCeEE
Q psy16863 412 VSLFDSGRWTCLAENAVGRS-HCSCELSVLVPKAY---------KAPFFTKELEAILTEQGTVSLECKVMGIP--TPQLI 479 (1075)
Q Consensus 412 v~~~d~G~Y~C~a~n~~g~~-~~s~~l~V~~~~~~---------~~p~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~v~ 479 (1075)
++.+|+|.|.|.|.|..+.. ...+.|.|..++.. .++.+.......+.+|++++|.|.+.+.| .+.+.
T Consensus 83 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 162 (247)
T 1svz_A 83 VEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMH 162 (247)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEE
T ss_pred CCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEE
Confidence 99999999999999976542 23467777765320 12233444445588999999999999875 56999
Q ss_pred EEeCC--Eec-------------------c---------CCCEEEEEeCCCCCCCcEEEEEEEEec
Q psy16863 480 WYKDN--KKI-------------------K---------AGDIFALTANPKDPSSLGTYTCEAVNC 515 (1075)
Q Consensus 480 W~~~g--~~l-------------------~---------~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 515 (1075)
|+|++ ..+ . ......|.|.++..+|+|.|.|.|.|.
T Consensus 163 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 163 WVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 99963 211 0 112357999999999999999999995
No 293
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.68 E-value=1e-15 Score=161.82 Aligned_cols=188 Identities=11% Similarity=0.144 Sum_probs=130.5
Q ss_pred CCCccccccccceeeccceeEEEEEecCC----CceEEEEe-cCCCeeeE-Eec-CCCcc----ccCCCeEEEee--CCe
Q psy16863 241 DAPAFIRRLHDIAVKVGTRARLLVEIRSP----TEIKCQFD-LNNTIPFS-FRA-QGDHP----IFGNRFRAINR--DGR 307 (1075)
Q Consensus 241 ~~p~~~~~~~~~~v~~g~~~~l~c~~~~~----~~~~c~~~-~~~~~~~~-w~~-~~~~~----~~~~~~~~~~~--~~~ 307 (1075)
.+|.+...+..+.+.+|+.++|.|.+.+. ..+.|.-. .+....+. +.. .++.. ....++.+..+ .+.
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 45667788899999999999999998752 12222111 11111111 111 11110 11357777643 456
Q ss_pred EEEEEcccCCCCCEEEEEEEEeC------------CeeEEEEEEEEEecCCC-----------CCCeeeeecCceeeccC
Q psy16863 308 TELNIRRVRRDDGGRYSVTASNE------------SGYSTAKFELSVESQVP-----------DAPAFIRRLHDIAVKVG 364 (1075)
Q Consensus 308 ~~L~I~~~~~~d~G~Y~C~a~n~------------~g~~~~~~~l~V~~~~~-----------~~p~~~~~~~~~~v~~G 364 (1075)
.+|+|.+++.+|+|.|.|.|.|. .+.....+.|.|..... .+|.+...+....+.+|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 78999999999999999999986 34444556777775221 15667778888999999
Q ss_pred CeEEEEEEEecCCC-cEEEEEEC--CEecC------------CCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCC
Q psy16863 365 TRARLLVEIRSPTE-IKIHWYRN--DRKLE------------ENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAV 428 (1075)
Q Consensus 365 ~~v~l~C~~~g~p~-~~v~W~k~--g~~l~------------~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~ 428 (1075)
++++|.|.+.+.+. +.+.|||. +..+. ...++.+..++....|.|.+++.+|+|.|.|.|.|..
T Consensus 165 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 243 (256)
T 3juy_B 165 ERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGAS 243 (256)
T ss_dssp SCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSS
T ss_pred CCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCC
Confidence 99999999988775 89999993 32221 2356777677778889999999999999999999854
No 294
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.68 E-value=4.3e-16 Score=162.89 Aligned_cols=164 Identities=16% Similarity=0.262 Sum_probs=115.1
Q ss_pred eeeecCceeeccCCeEEEEEEEecCCCcEEEEEEC--CEec---------------CCCCcEEEEE-cCCEEEEEEcccC
Q psy16863 352 FIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRN--DRKL---------------EENKIYRTQH-DGNFYFIDLSSVS 413 (1075)
Q Consensus 352 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~--g~~l---------------~~~~~~~~~~-~g~~~~L~I~~v~ 413 (1075)
+...+..+.+.+|++++|.|. .+.|.+.|.|+|+ +..+ ....++.+.. .+....|.|.+++
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 445667788999999999999 6888899999996 2111 1123555543 3345579999999
Q ss_pred CCCceeEEEEEEeCCCce-----eeEEEEEeecCCCCC-------CCeeeeecce-EEecCCeEEEEEEEECCCCCeEEE
Q psy16863 414 LFDSGRWTCLAENAVGRS-----HCSCELSVLVPKAYK-------APFFTKELEA-ILTEQGTVSLECKVMGIPTPQLIW 480 (1075)
Q Consensus 414 ~~d~G~Y~C~a~n~~g~~-----~~s~~l~V~~~~~~~-------~p~~~~~~~~-~~~~g~~v~l~C~~~g~p~~~v~W 480 (1075)
.+|+|.|.|.|.|..|.. .....|.|...+... .+.+...+.. .+.+|++++|.|.+.+.|.+.+.|
T Consensus 82 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W 161 (238)
T 2p1y_A 82 PSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPW 161 (238)
T ss_dssp GGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEE
T ss_pred cccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEE
Confidence 999999999999986531 123466666543200 0133333333 488999999999999999999999
Q ss_pred EeCC--Ee---c--------------------cCCCEEEEEeCCCCCCCcEEEEEEEEecc
Q psy16863 481 YKDN--KK---I--------------------KAGDIFALTANPKDPSSLGTYTCEAVNCM 516 (1075)
Q Consensus 481 ~~~g--~~---l--------------------~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 516 (1075)
+|++ .. + .......|.|.++..+|+|.|+|.|.|..
T Consensus 162 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 162 YQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 9964 11 1 11224579999999999999999999973
No 295
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.68 E-value=4.2e-16 Score=160.18 Aligned_cols=174 Identities=14% Similarity=0.128 Sum_probs=120.6
Q ss_pred cccceeeccceeEEEEEe-cCCCceEEEEecCCCeeeEEecCCC--cc------------ccCCCeEEEeeCCeEEEEEc
Q psy16863 249 LHDIAVKVGTRARLLVEI-RSPTEIKCQFDLNNTIPFSFRAQGD--HP------------IFGNRFRAINRDGRTELNIR 313 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~-~~~~~~~c~~~~~~~~~~~w~~~~~--~~------------~~~~~~~~~~~~~~~~L~I~ 313 (1075)
+....+.+|+.++|.|.+ +.+. +...+.|++++. .+ ....++.+...++..+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~---------~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 77 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNI---------GNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGIT 77 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTG---------GGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEEC
T ss_pred CCcEEecCCCeEEEEEEeecCCC---------CCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEEC
Confidence 566788999999999994 4321 123445554321 11 11457777767778899999
Q ss_pred ccCCCCCEEEEEEEEeCCe--eEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEec-CCCc-EEEEEECCEe
Q psy16863 314 RVRRDDGGRYSVTASNESG--YSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRS-PTEI-KIHWYRNDRK 389 (1075)
Q Consensus 314 ~~~~~d~G~Y~C~a~n~~g--~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g-~p~~-~v~W~k~g~~ 389 (1075)
+++.+|+|.|+|.|.|..+ .......|.|.. ...+|.+...+....+.+|+.++|.|.+.| .|.+ .|+|+|||..
T Consensus 78 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~-~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~ 156 (216)
T 2xzc_L 78 GLQTGDEADYYCGTWDSSLNPVFGGGTKLEIKR-TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL 156 (216)
T ss_dssp SCCGGGCEEEEEEEECTTSCEEEBCCEEEEECC-CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred CCCcccCEEEEEEEEeCCCcceECCCEEEEEcC-CCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCee
Confidence 9999999999999999876 223345677753 224677665444444457999999999987 5553 9999999999
Q ss_pred cCCCCc--EEEE--EcCCE---EEEEEcccCCCCceeEEEEEEeCCCcee
Q psy16863 390 LEENKI--YRTQ--HDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSH 432 (1075)
Q Consensus 390 l~~~~~--~~~~--~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~ 432 (1075)
+..+.. .... .++.. ..|.|..+..+|+|.|+|.|.|......
T Consensus 157 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 157 QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp CCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred cCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 876511 1111 12222 3689999999999999999999876544
No 296
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.68 E-value=3.9e-16 Score=161.16 Aligned_cols=180 Identities=13% Similarity=0.123 Sum_probs=121.7
Q ss_pred cccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCC-Cc----------------c----ccCCCeEEEee--C
Q psy16863 249 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQG-DH----------------P----IFGNRFRAINR--D 305 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~-~~----------------~----~~~~~~~~~~~--~ 305 (1075)
+..+.+.+|+.++|.|.+.+.+. +...+.|++.+ +. . ....++.+..+ .
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~--------~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~ 78 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTF--------TDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQ 78 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCG--------GGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTT
T ss_pred CCceeEcCCCEEEEEEEecCccC--------CCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCC
Confidence 34567889999999999875320 01233343321 10 0 01356776654 3
Q ss_pred CeEEEEEcccCCCCCEEEEEEEEeCCe-----eEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecC-CCc
Q psy16863 306 GRTELNIRRVRRDDGGRYSVTASNESG-----YSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSP-TEI 379 (1075)
Q Consensus 306 ~~~~L~I~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~-p~~ 379 (1075)
+..+|+|.+++.+|+|.|.|.+.|..+ .....+.|.|......+|.+........+.+|+.++|.|.+.|. |.+
T Consensus 79 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p 158 (222)
T 1q9r_B 79 SILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEP 158 (222)
T ss_dssp TEEEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSC
T ss_pred CeEEEEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCC
Confidence 567999999999999999999998654 22234577777544456776654444457789999999999884 777
Q ss_pred -EEEEEECCEecCCCCcEEEEEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEEEE
Q psy16863 380 -KIHWYRNDRKLEENKIYRTQHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSCEL 437 (1075)
Q Consensus 380 -~v~W~k~g~~l~~~~~~~~~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l 437 (1075)
.|.|+++|..+..........+|.. ..|.|.++..+| |.|+|.|.|..|.......+
T Consensus 159 ~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i 219 (222)
T 1q9r_B 159 VTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 219 (222)
T ss_dssp CEEEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred CEEEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEec
Confidence 9999999987643211112233321 358899999899 99999999999876544443
No 297
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.68 E-value=3e-16 Score=165.24 Aligned_cols=165 Identities=13% Similarity=0.211 Sum_probs=111.6
Q ss_pred ecCceeeccCCeEEEEEEEecCCCcE-----EEEEECCEecCCC--------CcEEEEE----------cCCEEEEEEcc
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSPTEIK-----IHWYRNDRKLEEN--------KIYRTQH----------DGNFYFIDLSS 411 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~p~~~-----v~W~k~g~~l~~~--------~~~~~~~----------~g~~~~L~I~~ 411 (1075)
.+..+.+.+|++++|.|.+.+.|.+. |.|+|++...... ....... ......|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 34556788999999999998877664 9999975332110 0000000 01123499999
Q ss_pred cCCCCceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEEC-CCCC-eEEEEeCCEeccC
Q psy16863 412 VSLFDSGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMG-IPTP-QLIWYKDNKKIKA 489 (1075)
Q Consensus 412 v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~v~W~~~g~~l~~ 489 (1075)
++.+|+|.|+|.+.|..+.......|.|..+| .+..........|+.+.|.|.+.| .|.+ .|+|+|+|+++..
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P-----~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~ 163 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVASP-----ASRLLLDQVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPH 163 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCC-----EEEEECC--------CEEEEEEEEEBSSCCEEEEEEECSSSCS
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEecCC-----ceEEecCCccccCCCcEEEEEEccEECCCeEEEEEECCccCCC
Confidence 99999999999999998887778888887654 344333344556788889999998 8998 9999999964321
Q ss_pred -----------------CC----EEEEEeCCCCCCCcEEEEEEEEecceeeEEEEE
Q psy16863 490 -----------------GD----IFALTANPKDPSSLGTYTCEAVNCMGAAFSTSR 524 (1075)
Q Consensus 490 -----------------~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 524 (1075)
.. ...|.+......|.|.|+|.|.|..+.......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~ 219 (248)
T 3pv7_A 164 PIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSN 219 (248)
T ss_dssp CEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEE
T ss_pred ccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEE
Confidence 11 125777888889999999999999887444333
No 298
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.68 E-value=3.9e-16 Score=163.97 Aligned_cols=168 Identities=15% Similarity=0.220 Sum_probs=112.7
Q ss_pred EeccceeeeecCCeEEEEEEEecCCCCeEEEEEC--CEEe--------------ecCCcEEEEEeeCcEEEEEEccccCC
Q psy16863 752 IEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRD--DQQV--------------VESDNVKILKETLGVCHLKIHALEVA 815 (1075)
Q Consensus 752 ~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~--g~~i--------------~~~~~~~~~~~~~~~~~L~I~~~~~~ 815 (1075)
...+..+.+.+|+++.|.|.+.+.|.+.+.|||. +..+ ....++.+.....+.+.|.|.+++.+
T Consensus 5 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~ 84 (245)
T 3nfj_J 5 HQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLS 84 (245)
T ss_dssp EEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGG
T ss_pred eCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChh
Confidence 3445567799999999999999999999999992 2111 11246666655566789999999999
Q ss_pred CCeEEEEEEEeCCc------eEEEEEEEEEEec-CCCCCCeee-eecce-eecCCCeEEEEEEEEcc-CCC-eeEEEECC
Q psy16863 816 DQAEWKCIATNDFG------QSITSCFLKLNVP-KHYKKPKFL-EELKA-VLSEGGAVNLECKVIGV-PQP-TLKWFKDG 884 (1075)
Q Consensus 816 D~G~Y~C~A~N~~G------~~~~s~~l~V~~~-~~~~~p~~~-~~~~~-~~~~g~~~~L~C~v~g~-p~p-~v~W~k~g 884 (1075)
|+|.|.|.|.|..| .......|.|... ....+|.+. ..... .+.+|+.++|.|.+.|. |++ .|+|+|||
T Consensus 85 D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g 164 (245)
T 3nfj_J 85 DSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNG 164 (245)
T ss_dssp GCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred hCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECC
Confidence 99999999999433 2223456677641 112344432 22221 24458999999999995 434 68999999
Q ss_pred EEcCCCC----------------ee----EEEECCCCcee-eEEEEEEEEeCCeeE
Q psy16863 885 RELKAGD----------------IH----KIISGEDGTCC-LGIYTCEAHNCMGTT 919 (1075)
Q Consensus 885 ~~l~~~~----------------~~----~i~~~~~~~~d-~G~Y~C~a~N~~G~~ 919 (1075)
.+|..+. .+ .|.+......| .|.|+|.|.|..+..
T Consensus 165 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~ 220 (245)
T 3nfj_J 165 KEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp EEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCS
T ss_pred EECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCC
Confidence 9986532 11 12222222234 569999999976543
No 299
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.67 E-value=5.4e-16 Score=163.73 Aligned_cols=197 Identities=15% Similarity=0.176 Sum_probs=130.8
Q ss_pred ccccccceeeccceeEEEEEecCC----CceEEEE-ecCCCeeeEEec--CCC----ccccCCCeEEEee--CCeEEEEE
Q psy16863 246 IRRLHDIAVKVGTRARLLVEIRSP----TEIKCQF-DLNNTIPFSFRA--QGD----HPIFGNRFRAINR--DGRTELNI 312 (1075)
Q Consensus 246 ~~~~~~~~v~~g~~~~l~c~~~~~----~~~~c~~-~~~~~~~~~w~~--~~~----~~~~~~~~~~~~~--~~~~~L~I 312 (1075)
+..+.++.+.+|+.++|.|.+.+. ..+.|.- ..+....+..+. .+. ......++.+..+ .+..+|+|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 84 (253)
T 3uzq_A 5 LEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHL 84 (253)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEe
Confidence 445567789999999999998752 2233221 111122221111 010 0111356776654 34678999
Q ss_pred cccCCCCCEEEEEEEEeCCeeE-EEEEEEEEecC-----------CCCCCeeeeecCceeeccCCeEEEEEEEecCCCc-
Q psy16863 313 RRVRRDDGGRYSVTASNESGYS-TAKFELSVESQ-----------VPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEI- 379 (1075)
Q Consensus 313 ~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~-----------~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~- 379 (1075)
.+++.+|+|.|.|.|.|..+.. ...+.|.|... ...+|.+...+....+.+|++++|.|.+.+.+.+
T Consensus 85 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 164 (253)
T 3uzq_A 85 SSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRY 164 (253)
T ss_dssp CSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEET
T ss_pred CCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccC
Confidence 9999999999999999965542 34566777641 2235677777788899999999999999888766
Q ss_pred ---EEEEEEC--CEecC------------CCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCcee-eEEEEEeec
Q psy16863 380 ---KIHWYRN--DRKLE------------ENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSH-CSCELSVLV 441 (1075)
Q Consensus 380 ---~v~W~k~--g~~l~------------~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~-~s~~l~V~~ 441 (1075)
.+.|||+ +..+. ...++.....+....|.|.+++.+|+|.|.|.|.|..+... .-..|.|..
T Consensus 165 ~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~ 244 (253)
T 3uzq_A 165 GNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKR 244 (253)
T ss_dssp TEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECC
T ss_pred CCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcC
Confidence 9999995 32221 12466666677778899999999999999999998654322 234566654
Q ss_pred C
Q psy16863 442 P 442 (1075)
Q Consensus 442 ~ 442 (1075)
.
T Consensus 245 ~ 245 (253)
T 3uzq_A 245 P 245 (253)
T ss_dssp C
T ss_pred C
Confidence 3
No 300
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.67 E-value=1e-16 Score=157.02 Aligned_cols=152 Identities=15% Similarity=0.159 Sum_probs=112.6
Q ss_pred ceeeccCCeEEEEEEEecCCCcEEEEEECCEecCC------------CCcEEEEEcCCEEEEEEcccCCCCceeEEEEEE
Q psy16863 358 DIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEE------------NKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 358 ~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~------------~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
.+.+.+|++++|.|.+. .|.+.|.|+|++..+.. ..|+.+...+ ..|.|.+++.+|+|.|+|.|.
T Consensus 4 ~v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~--~sL~I~~v~~~DsG~Y~C~~~ 80 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVS--GSLTIYNLTSSDEDEYEMESP 80 (171)
T ss_dssp EEEEETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTT--CCEEECSCCGGGCEEEEEECT
T ss_pred EEEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCC--CeEEECCCChhhCceEEEEEe
Confidence 45788999999999984 47899999999875421 1122222111 258999999999999999999
Q ss_pred eCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECCCCCeEEEEeCCEeccCCCEEEEEeCCCCCCCc
Q psy16863 426 NAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGIPTPQLIWYKDNKKIKAGDIFALTANPKDPSSL 505 (1075)
Q Consensus 426 n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~l~~~~~~~l~i~~~~~~d~ 505 (1075)
|..| ...+.|.|..++ ..|.+..... ...|.|.+.+.|.|.|+|+++|..+.......+.+. ...|+
T Consensus 81 n~~~--~~~~~L~V~~~~--~~p~i~~~~~-------~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~~l~~~--~~~~~ 147 (171)
T 1ccz_A 81 NITD--TMKFFLYVLEMV--SKPMIYWECS-------NATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQ--WTNLR 147 (171)
T ss_dssp TCCS--CEEEEEEEECCC--CCCEEEEETT-------TTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEE--CSCCS
T ss_pred CCCC--cEEEEEEEECcC--CCCEEEEecC-------CcEEEEEeCCCCCcEEEEEECCEECcCCcceEEEEe--ccCCC
Confidence 9877 567778887653 2344433221 137999999989999999999999876555555544 36788
Q ss_pred EEEEEEEEecceeeEEEEEE
Q psy16863 506 GTYTCEAVNCMGAAFSTSRV 525 (1075)
Q Consensus 506 G~Y~C~a~n~~g~~~~~~~v 525 (1075)
|.|+|.|.|..|...+++.+
T Consensus 148 g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 148 APFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp SCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEcccCcccceeEE
Confidence 99999999999987766543
No 301
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.67 E-value=1e-15 Score=161.97 Aligned_cols=161 Identities=13% Similarity=0.237 Sum_probs=118.7
Q ss_pred cCceeeccCCeEEEEEEEecC--CCcEEEEEECC--Eec------------CCCCcEEEEEcCCEEEEEEcccCCCCcee
Q psy16863 356 LHDIAVKVGTRARLLVEIRSP--TEIKIHWYRND--RKL------------EENKIYRTQHDGNFYFIDLSSVSLFDSGR 419 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~--p~~~v~W~k~g--~~l------------~~~~~~~~~~~g~~~~L~I~~v~~~d~G~ 419 (1075)
+..+.+.+|++++|.|.+.+. +.+.+.|||++ ..+ ....++.+...+....|.|.+++.+|+|.
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 88 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEAD 88 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEE
Confidence 345789999999999999876 78899999953 111 12357777777778889999999999999
Q ss_pred EEEEEEeCCCce---eeEEEEEeecCCCCC----------------CCeeeeecceEEecCCeEEEEEEEECCC--CCeE
Q psy16863 420 WTCLAENAVGRS---HCSCELSVLVPKAYK----------------APFFTKELEAILTEQGTVSLECKVMGIP--TPQL 478 (1075)
Q Consensus 420 Y~C~a~n~~g~~---~~s~~l~V~~~~~~~----------------~p~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~v 478 (1075)
|.|.+.|..+.. .....|.|..++... .+.+.......+.+|++++|.|.+.+.| .+.+
T Consensus 89 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 168 (256)
T 3ux9_B 89 YYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAM 168 (256)
T ss_dssp EEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEE
T ss_pred EEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEE
Confidence 999999976532 234667777654211 2234444445588999999999999877 6799
Q ss_pred EEEeC--CEec----------------------------cCCCEEEEEeCCCCCCCcEEEEEEEEecc
Q psy16863 479 IWYKD--NKKI----------------------------KAGDIFALTANPKDPSSLGTYTCEAVNCM 516 (1075)
Q Consensus 479 ~W~~~--g~~l----------------------------~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 516 (1075)
.|+|+ +..+ .......|.|.++..+|+|.|+|.|.|..
T Consensus 169 ~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 169 SWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 99986 3222 01335569999999999999999999963
No 302
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.67 E-value=1.2e-16 Score=170.64 Aligned_cols=192 Identities=16% Similarity=0.208 Sum_probs=111.7
Q ss_pred cCCCCCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEEC--CEec--
Q psy16863 315 VRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRN--DRKL-- 390 (1075)
Q Consensus 315 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~--g~~l-- 390 (1075)
.+..|.+.|.|.|.|..|....... +.+...+..+.+.+|++++|.|.+.+ +.+.|.|||. +..+
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~----------~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~ 71 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGG----------MKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKF 71 (270)
T ss_dssp -----------------------------------CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEE
T ss_pred chhhhHHHHHHHHhccCCccccccc----------eeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEE
Confidence 3467899999999998775443332 33445566788999999999999855 6789999992 2111
Q ss_pred ----------CCC---C-cEEEEE-cCCEEEEEEcccCCCCceeEEEEEEeCCC----ceeeEEEEEeecCC-CCCCCee
Q psy16863 391 ----------EEN---K-IYRTQH-DGNFYFIDLSSVSLFDSGRWTCLAENAVG----RSHCSCELSVLVPK-AYKAPFF 450 (1075)
Q Consensus 391 ----------~~~---~-~~~~~~-~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g----~~~~s~~l~V~~~~-~~~~p~~ 450 (1075)
... . ++.+.. ......|.|.+++.+|+|.|.|.+.+..+ .......|.|.... ...+|.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v 151 (270)
T 3qib_D 72 LINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEV 151 (270)
T ss_dssp EEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEE
T ss_pred EEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCce
Confidence 000 0 454443 33456799999999999999999997432 22234567776521 1123433
Q ss_pred ee-ecce-EEecCCeEEEEEEEEC-CCCC-eEEEEeCCEeccCC----------------CEE----EEEeCCCCCCC-c
Q psy16863 451 TK-ELEA-ILTEQGTVSLECKVMG-IPTP-QLIWYKDNKKIKAG----------------DIF----ALTANPKDPSS-L 505 (1075)
Q Consensus 451 ~~-~~~~-~~~~g~~v~l~C~~~g-~p~~-~v~W~~~g~~l~~~----------------~~~----~l~i~~~~~~d-~ 505 (1075)
.. .+.. .+..|+.++|.|.+.| .|.+ .++|+|||+++..+ ..+ .|.+.....+| .
T Consensus 152 ~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~ 231 (270)
T 3qib_D 152 AVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPR 231 (270)
T ss_dssp EEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTT
T ss_pred EEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCC
Confidence 22 2222 2456899999999998 6766 89999999998542 222 34566555556 8
Q ss_pred EEEEEEEEecce
Q psy16863 506 GTYTCEAVNCMG 517 (1075)
Q Consensus 506 G~Y~C~a~n~~g 517 (1075)
|.|+|.|.|...
T Consensus 232 g~YtC~v~~~~l 243 (270)
T 3qib_D 232 NHFRCQVQFYGL 243 (270)
T ss_dssp CEEEEEEEECCB
T ss_pred CeEEEEEEecCC
Confidence 999999999754
No 303
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.67 E-value=3.8e-16 Score=164.09 Aligned_cols=169 Identities=15% Similarity=0.172 Sum_probs=114.1
Q ss_pred CeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEE--------------CCEEeecC----CcEEEEEeeCcEEEEEEc
Q psy16863 749 PKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFR--------------DDQQVVES----DNVKILKETLGVCHLKIH 810 (1075)
Q Consensus 749 p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k--------------~g~~i~~~----~~~~~~~~~~~~~~L~I~ 810 (1075)
+.++..+..+.+.+|+++.|.| ..+.|.+.+.||| ++..+... .++.+.....+.+.|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 3455566778899999999999 6678899999999 33333222 677766544557799999
Q ss_pred cccCCCCeEEEEEEEeC----CceEEEEEEEEEEecC-CCCCCeee-eecc-eeecCCCeEEEEEEEEccCC-C-eeEEE
Q psy16863 811 ALEVADQAEWKCIATND----FGQSITSCFLKLNVPK-HYKKPKFL-EELK-AVLSEGGAVNLECKVIGVPQ-P-TLKWF 881 (1075)
Q Consensus 811 ~~~~~D~G~Y~C~A~N~----~G~~~~s~~l~V~~~~-~~~~p~~~-~~~~-~~~~~g~~~~L~C~v~g~p~-p-~v~W~ 881 (1075)
+++.+|+|.|.|.|.|. .+.......|.|.... ...+|.+. .... ..+.+|+.++|.|.+.|.++ + .|+|+
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 161 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 161 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEE
Confidence 99999999999999963 2233334566776311 11234332 2222 12456999999999999544 4 89999
Q ss_pred ECCEEcCCCC----------------eeE----EEECCCCcee-eEEEEEEEEeCCee
Q psy16863 882 KDGRELKAGD----------------IHK----IISGEDGTCC-LGIYTCEAHNCMGT 918 (1075)
Q Consensus 882 k~g~~l~~~~----------------~~~----i~~~~~~~~d-~G~Y~C~a~N~~G~ 918 (1075)
|||.+|..+. .+. +.+......| .|.|+|.|.|....
T Consensus 162 ~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 162 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 9999987531 122 2222222335 89999999997543
No 304
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.67 E-value=1e-15 Score=158.87 Aligned_cols=172 Identities=15% Similarity=0.221 Sum_probs=113.9
Q ss_pred ceeeeecCCeEEEEEEEecCC--CCeEEEEECC--E---Eee-------------cCCcEEEEEe-eCcEEEEEEccccC
Q psy16863 756 KSCQATVNEEFKFTVQVSISP--EPKVSWFRDD--Q---QVV-------------ESDNVKILKE-TLGVCHLKIHALEV 814 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~---~i~-------------~~~~~~~~~~-~~~~~~L~I~~~~~ 814 (1075)
....+.+|++++|.|.+.+.| .+.+.|||.. . .+. ...|+.+..+ ..+.+.|+|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (232)
T 1dn0_B 8 GAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTA 87 (232)
T ss_dssp CCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCc
Confidence 345688999999999999875 6789999853 2 110 1356766544 23577999999999
Q ss_pred CCCeEEEEEEE--eCCce----EEEEEEEEEEecCCCCCCeeee-ecceeecCC-CeEEEEEEEEcc-CCC-eeEEEE-C
Q psy16863 815 ADQAEWKCIAT--NDFGQ----SITSCFLKLNVPKHYKKPKFLE-ELKAVLSEG-GAVNLECKVIGV-PQP-TLKWFK-D 883 (1075)
Q Consensus 815 ~D~G~Y~C~A~--N~~G~----~~~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g-~~~~L~C~v~g~-p~p-~v~W~k-~ 883 (1075)
+|+|.|.|.+. |..|. ......|.|...+ ..+|.+.. .....+..| +.++|.|.+.|. |.| .|+|+| |
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~-~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (232)
T 1dn0_B 88 ADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGS-ASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKN 166 (232)
T ss_dssp GGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSC-CBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETT
T ss_pred ccCEEEEEEEecCCcCCchhhhcccceEEEEccCC-CCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCC
Confidence 99999999999 42121 1123567776522 13344331 222234478 899999999987 776 999999 9
Q ss_pred CEEcCC---------CCee----EEEECCCCc--eeeEEEEEEEEeCCeeEEEEEEEEEe
Q psy16863 884 GRELKA---------GDIH----KIISGEDGT--CCLGIYTCEAHNCMGTTSSSAALLGF 928 (1075)
Q Consensus 884 g~~l~~---------~~~~----~i~~~~~~~--~d~G~Y~C~a~N~~G~~~~~~~l~v~ 928 (1075)
|..+.. +..+ .|.+..... .|.|.|+|.|.|..|.......+.+.
T Consensus 167 g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 167 NSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp SCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC-
T ss_pred CCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCC
Confidence 988743 1222 244444443 57899999999999988766665543
No 305
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.67 E-value=3.7e-16 Score=163.56 Aligned_cols=168 Identities=14% Similarity=0.205 Sum_probs=112.5
Q ss_pred eEEeccceeeeecCCeEEEEEEEecCCCCeEEEEE--------------CCEEeec---CCcEEEEEeeCcEEEEEEccc
Q psy16863 750 KFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFR--------------DDQQVVE---SDNVKILKETLGVCHLKIHAL 812 (1075)
Q Consensus 750 ~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k--------------~g~~i~~---~~~~~~~~~~~~~~~L~I~~~ 812 (1075)
.+...+..+.+.+|+++.|.|.+.+ |.+.+.||| ++..... ..++.+.....+.+.|.|.++
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 82 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSAL 82 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSC
T ss_pred ccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcC
Confidence 3445556778999999999999986 888999999 2222222 246776654455779999999
Q ss_pred cCCCCeEEEEEEEeCCc---eEEEEEEEEEEec-CCCCCCeeee-ecce-eecCCCeEEEEEEEEc-cCCC-eeEEEECC
Q psy16863 813 EVADQAEWKCIATNDFG---QSITSCFLKLNVP-KHYKKPKFLE-ELKA-VLSEGGAVNLECKVIG-VPQP-TLKWFKDG 884 (1075)
Q Consensus 813 ~~~D~G~Y~C~A~N~~G---~~~~s~~l~V~~~-~~~~~p~~~~-~~~~-~~~~g~~~~L~C~v~g-~p~p-~v~W~k~g 884 (1075)
+.+|+|.|.|.|.+..+ .......|.|... ....+|.+.. .... .+.+|+.++|.|.+.| .|.| .|+|+|||
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g 162 (240)
T 3q5y_A 83 ELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNG 162 (240)
T ss_dssp CGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred ChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECC
Confidence 99999999999984322 2223456666631 1223444332 2221 2456899999999998 5556 78999999
Q ss_pred EEcCCCCe------------eE----EEECCCCcee-eEEEEEEEEeCCee
Q psy16863 885 RELKAGDI------------HK----IISGEDGTCC-LGIYTCEAHNCMGT 918 (1075)
Q Consensus 885 ~~l~~~~~------------~~----i~~~~~~~~d-~G~Y~C~a~N~~G~ 918 (1075)
.+|..+.. +. |.+......| .|.|+|.|.|....
T Consensus 163 ~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 163 KEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp EEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 99865322 11 2332222345 67999999997654
No 306
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.67 E-value=1e-15 Score=157.09 Aligned_cols=174 Identities=15% Similarity=0.197 Sum_probs=135.3
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCC--CcEEEEEcCCEEEEEEcccCCCCceeEEEEEE
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEEN--KIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~--~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
.+|.| ..+.++.+.+|+.++|.|.+.|.|.+.|.|+|+|..+..+ .++.+...+....|.|.++..+|+|.|+|.|.
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 36666 4566789999999999999999999999999999999766 56777777778889999999999999999999
Q ss_pred eCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEE----CCCCC--eEEEEeCCEeccCC---------
Q psy16863 426 NAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVM----GIPTP--QLIWYKDNKKIKAG--------- 490 (1075)
Q Consensus 426 n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~----g~p~~--~v~W~~~g~~l~~~--------- 490 (1075)
|..|....++.|.|..+|. +|.... ....+..+.|.|... +.|.. .+.|.+++...-..
T Consensus 97 n~~g~~~~~~~l~v~~~P~--~p~~~~----~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~ 170 (215)
T 3mtr_A 97 NRIGQESLEFILVQADTPS--SPSIDQ----VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEAS 170 (215)
T ss_dssp CSSCEEEEEEEEEECCCCC--CCEEEE----EEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHH
T ss_pred ECCCceEEEEEEEECCCCC--CCcceE----EEEecceEEEEEecCCccCCCceEEEEEEEEECCCCccccccccccccc
Confidence 9999998888888876653 232221 123467789999743 23333 57899887642111
Q ss_pred CEEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEe
Q psy16863 491 DIFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIAR 528 (1075)
Q Consensus 491 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~ 528 (1075)
....+.|..+...+.|.|+|.|.|..|....+..+.+.
T Consensus 171 ~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~ 208 (215)
T 3mtr_A 171 MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 208 (215)
T ss_dssp HHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEE
T ss_pred ccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeE
Confidence 11468889999999999999999999988777666655
No 307
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.67 E-value=3.4e-16 Score=165.11 Aligned_cols=168 Identities=17% Similarity=0.279 Sum_probs=122.0
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCC-----CcEEEEEECC--Eec------------CCCCcEEEEEcCCEEEEEE
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPT-----EIKIHWYRND--RKL------------EENKIYRTQHDGNFYFIDL 409 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p-----~~~v~W~k~g--~~l------------~~~~~~~~~~~g~~~~L~I 409 (1075)
.+.+...+..+.+.+|++++|.|.+.+.+ .+.|.|||++ ..+ ....++.+...+....|.|
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 113 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRI 113 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEE
Confidence 34455556778899999999999998877 6899999965 111 1135677766777778999
Q ss_pred cccCCCCceeEEEEEEeCCCce-eeEEEEEeecCCCCCCCeeeee-cceEEecCCeEEEEEEEEC-CCCC-eEEEEeCCE
Q psy16863 410 SSVSLFDSGRWTCLAENAVGRS-HCSCELSVLVPKAYKAPFFTKE-LEAILTEQGTVSLECKVMG-IPTP-QLIWYKDNK 485 (1075)
Q Consensus 410 ~~v~~~d~G~Y~C~a~n~~g~~-~~s~~l~V~~~~~~~~p~~~~~-~~~~~~~g~~v~l~C~~~g-~p~~-~v~W~~~g~ 485 (1075)
.+++.+|+|.|.|.|.|..+.. .....|.|.... .+|.+... ....+.+|+.++|.|.+.| .|.+ .|+|+|+|+
T Consensus 114 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~--~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 191 (252)
T 3bkj_L 114 SRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRAD--AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGS 191 (252)
T ss_dssp SSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCC--BCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred CCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCC--cCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCe
Confidence 9999999999999999876532 223456665432 23444432 2222346889999999998 4554 899999999
Q ss_pred eccCC------------CE----EEEEeCCCCCCCcEEEEEEEEeccee
Q psy16863 486 KIKAG------------DI----FALTANPKDPSSLGTYTCEAVNCMGA 518 (1075)
Q Consensus 486 ~l~~~------------~~----~~l~i~~~~~~d~G~Y~C~a~n~~g~ 518 (1075)
++..+ .. ..|.|.....+|+|.|+|.|.|....
T Consensus 192 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 192 ERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp EECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred ecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 87544 11 24778778888999999999997654
No 308
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.66 E-value=1.6e-15 Score=162.69 Aligned_cols=185 Identities=13% Similarity=0.213 Sum_probs=128.2
Q ss_pred cccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCC-c------------------cccCCCeEEEee--C
Q psy16863 247 RRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGD-H------------------PIFGNRFRAINR--D 305 (1075)
Q Consensus 247 ~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~-~------------------~~~~~~~~~~~~--~ 305 (1075)
..+....+.+|+.++|.|.+.+.+. +...+.|++++. . .....++.+..+ +
T Consensus 31 ~~p~~~~v~~G~~v~L~C~~~g~~~--------~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~ 102 (282)
T 1qok_A 31 QQSGAELVRSGTSVKLSCTASGFNI--------KDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSS 102 (282)
T ss_dssp EECCCEEEETTCCEEEEEEEESSCG--------GGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTT
T ss_pred ECCCCEEEeCCCeEEEEEeccCCCC--------CCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCC
Confidence 3455678899999999999864310 122344444221 0 011356776653 4
Q ss_pred CeEEEEEcccCCCCCEEEEEEEEeCCe---e--EEEEEEEEEecCC-----------CCCCeeeeecCceeeccCCeEEE
Q psy16863 306 GRTELNIRRVRRDDGGRYSVTASNESG---Y--STAKFELSVESQV-----------PDAPAFIRRLHDIAVKVGTRARL 369 (1075)
Q Consensus 306 ~~~~L~I~~~~~~d~G~Y~C~a~n~~g---~--~~~~~~l~V~~~~-----------~~~p~~~~~~~~~~v~~G~~v~l 369 (1075)
+..+|+|.+++.+|+|.|.|.|.|..| . ....+.|.|.... ..++.+...+....+.+|++++|
T Consensus 103 ~~~sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L 182 (282)
T 1qok_A 103 NTAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTI 182 (282)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEE
T ss_pred CeEEEEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEE
Confidence 567999999999999999999999865 1 2234567776522 12455666677888999999999
Q ss_pred EEEEecCCCcEEEEEE--CCEecC------------CCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCce-eeE
Q psy16863 370 LVEIRSPTEIKIHWYR--NDRKLE------------ENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRS-HCS 434 (1075)
Q Consensus 370 ~C~~~g~p~~~v~W~k--~g~~l~------------~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~-~~s 434 (1075)
.|.+.+.+ +.+.||| +|..+. ...++....++....|.|.++..+|+|.|+|.|.|..+.. ...
T Consensus 183 ~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~g 261 (282)
T 1qok_A 183 TCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAG 261 (282)
T ss_dssp EEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCC
T ss_pred EEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCC
Confidence 99998888 8999999 665441 2356666666677789999999999999999998854322 223
Q ss_pred EEEEee
Q psy16863 435 CELSVL 440 (1075)
Q Consensus 435 ~~l~V~ 440 (1075)
..|.|.
T Consensus 262 t~l~V~ 267 (282)
T 1qok_A 262 TKLELK 267 (282)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 456664
No 309
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.66 E-value=1.6e-15 Score=160.78 Aligned_cols=167 Identities=14% Similarity=0.222 Sum_probs=122.8
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCC------CcEEEEEEC--CEecC------------CCCcEEEEEcCCEEEEE
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPT------EIKIHWYRN--DRKLE------------ENKIYRTQHDGNFYFID 408 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p------~~~v~W~k~--g~~l~------------~~~~~~~~~~g~~~~L~ 408 (1075)
.+.+...+..+.+.+|++++|.|.+.+.+ .+.|.|||+ |..+. ...++.+..++....|.
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~ 84 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLT 84 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEE
Confidence 45566677788999999999999998876 689999995 32211 13567766666777899
Q ss_pred EcccCCCCceeEEEEEEeCCCce-eeEEEEEeecCCC---------------CCCCeeeeecceEEecCCeEEEEEEEEC
Q psy16863 409 LSSVSLFDSGRWTCLAENAVGRS-HCSCELSVLVPKA---------------YKAPFFTKELEAILTEQGTVSLECKVMG 472 (1075)
Q Consensus 409 I~~v~~~d~G~Y~C~a~n~~g~~-~~s~~l~V~~~~~---------------~~~p~~~~~~~~~~~~g~~v~l~C~~~g 472 (1075)
|.+++.+|+|.|.|.+.|..+.. ...+.|.|..++. ...+.+.......+.+|++++|.|.+.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~ 164 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASG 164 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEES
T ss_pred ECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeC
Confidence 99999999999999999875532 2345788876541 0112233333446889999999999998
Q ss_pred CCC--CeEEEEeCC--Ee---cc-------------------------CCCEEEEEeCCCCCCCcEEEEEEEEec
Q psy16863 473 IPT--PQLIWYKDN--KK---IK-------------------------AGDIFALTANPKDPSSLGTYTCEAVNC 515 (1075)
Q Consensus 473 ~p~--~~v~W~~~g--~~---l~-------------------------~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 515 (1075)
.|. +.+.|+|+. +. +. ......|.|..+..+|+|.|.|.|.|.
T Consensus 165 ~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 165 YSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp SCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 874 799999963 21 10 112457999999999999999999995
No 310
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.66 E-value=4.1e-16 Score=160.06 Aligned_cols=168 Identities=16% Similarity=0.150 Sum_probs=109.8
Q ss_pred ceeeeecCCeEEEEEEEecC--CCCeEEEEECC--E---Ee-------------ecCCcEEEEEeeCcEEEEEEccccCC
Q psy16863 756 KSCQATVNEEFKFTVQVSIS--PEPKVSWFRDD--Q---QV-------------VESDNVKILKETLGVCHLKIHALEVA 815 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g~--p~p~v~W~k~g--~---~i-------------~~~~~~~~~~~~~~~~~L~I~~~~~~ 815 (1075)
....+.+|++++|.|.+.+. +.+.+.|||.. . .+ ....++.+.. ..+.+.|.|.+++.+
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~ 85 (215)
T 3nl4_H 7 GGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISK-TSTTVDLKITSPTTE 85 (215)
T ss_dssp CCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEE-CSSEEEEEESSCCGG
T ss_pred CCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEe-eCCEEEEEECCCCcc
Confidence 45668899999999999874 46799999842 1 11 1235666655 456788999999999
Q ss_pred CCeEEEEEEEeCCce----EEEEEEEEEEecCCCCCCeee-eecceeecCCCeEEEEEEEEccCCC--eeEEEECCEEcC
Q psy16863 816 DQAEWKCIATNDFGQ----SITSCFLKLNVPKHYKKPKFL-EELKAVLSEGGAVNLECKVIGVPQP--TLKWFKDGRELK 888 (1075)
Q Consensus 816 D~G~Y~C~A~N~~G~----~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~~~L~C~v~g~p~p--~v~W~k~g~~l~ 888 (1075)
|+|.|.|.+.|..+. ......|.|... ...+|.+. ......+.+|+.++|.|.+.|.|++ .+.|+|+|..+.
T Consensus 86 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~ 164 (215)
T 3nl4_H 86 DTATYFCVRKYGSEWGGDLWGPGTLVTVSSG-QPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNG 164 (215)
T ss_dssp GCEEEEEEEECSSSSCEEEECCCEEEEECSS-CCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred cCEEEEEEEecCCCccceEEcCCEEEEEeCC-CcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECC
Confidence 999999999998653 222345666532 22344443 2233335679999999999997543 577999997442
Q ss_pred ---------CCCeeEEEE-CCCCceeeEEEEEEEEeCCeeEEEEEEEE
Q psy16863 889 ---------AGDIHKIIS-GEDGTCCLGIYTCEAHNCMGTTSSSAALL 926 (1075)
Q Consensus 889 ---------~~~~~~i~~-~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~ 926 (1075)
.+..+.+.. ......| |.|+|.|.|..|.....+.|.
T Consensus 165 ~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 165 VRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVA 211 (215)
T ss_dssp EEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECC
T ss_pred eEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecC
Confidence 222333311 1122345 999999999999877666554
No 311
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.66 E-value=3.5e-16 Score=164.50 Aligned_cols=168 Identities=17% Similarity=0.234 Sum_probs=119.2
Q ss_pred eeeeecCceeeccCCeEEEEEEEecCCCcEEEEEE----------------CCEecCCC---CcEEEEE-cCCEEEEEEc
Q psy16863 351 AFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYR----------------NDRKLEEN---KIYRTQH-DGNFYFIDLS 410 (1075)
Q Consensus 351 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k----------------~g~~l~~~---~~~~~~~-~g~~~~L~I~ 410 (1075)
.+...+..+.+.+|++++|.|.+.+.+.+.|.||| ++..+... .++.+.. .+....|.|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 34556677889999999999999998999999999 44333322 4666554 3456789999
Q ss_pred ccCCCCceeEEEEEEeCCCc----eeeEEEEEeecCC-CCCCCeee-eecc-eEEecCCeEEEEEEEECCCCC--eEEEE
Q psy16863 411 SVSLFDSGRWTCLAENAVGR----SHCSCELSVLVPK-AYKAPFFT-KELE-AILTEQGTVSLECKVMGIPTP--QLIWY 481 (1075)
Q Consensus 411 ~v~~~d~G~Y~C~a~n~~g~----~~~s~~l~V~~~~-~~~~p~~~-~~~~-~~~~~g~~v~l~C~~~g~p~~--~v~W~ 481 (1075)
+++.+|+|.|.|.+.|..+. ......|.|.... ...+|.+. ..+. ..+.+|+.++|.|.+.|.|++ .++|+
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 162 (246)
T 4dzb_B 83 SAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 162 (246)
T ss_dssp SCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEE
Confidence 99999999999999986541 2234566666421 11233332 2222 225569999999999987654 89999
Q ss_pred eCCEeccCC----------------CEE----EEEeCCCCCCC-cEEEEEEEEeccee
Q psy16863 482 KDNKKIKAG----------------DIF----ALTANPKDPSS-LGTYTCEAVNCMGA 518 (1075)
Q Consensus 482 ~~g~~l~~~----------------~~~----~l~i~~~~~~d-~G~Y~C~a~n~~g~ 518 (1075)
|||..+..+ ..+ .|.+...+.+| .|.|+|.|.|....
T Consensus 163 k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~ 220 (246)
T 4dzb_B 163 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 220 (246)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCC
Confidence 999988642 222 26677666677 99999999997543
No 312
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.66 E-value=2.4e-16 Score=163.27 Aligned_cols=166 Identities=20% Similarity=0.299 Sum_probs=111.3
Q ss_pred ceeeeecCCeEEEEEEEecCCC----CeEEEEEC--CEEe---e-------------cCCcEEEEEee-CcEEEEEEccc
Q psy16863 756 KSCQATVNEEFKFTVQVSISPE----PKVSWFRD--DQQV---V-------------ESDNVKILKET-LGVCHLKIHAL 812 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g~p~----p~v~W~k~--g~~i---~-------------~~~~~~~~~~~-~~~~~L~I~~~ 812 (1075)
....+.+|++++|.|.+.+.|. +.+.|||+ |..+ . ...|+.+..+. .+...|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (228)
T 3bae_H 8 GPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSV 87 (228)
T ss_dssp CCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSC
T ss_pred CceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCC
Confidence 4456889999999999998875 89999985 2221 1 12466665432 24679999999
Q ss_pred cCCCCeEEEEEEEeCCc------eE-E--EEEEEEEEecCCCCCCeeee-ecceeecCCCeEEEEEEEEcc-CCC-eeEE
Q psy16863 813 EVADQAEWKCIATNDFG------QS-I--TSCFLKLNVPKHYKKPKFLE-ELKAVLSEGGAVNLECKVIGV-PQP-TLKW 880 (1075)
Q Consensus 813 ~~~D~G~Y~C~A~N~~G------~~-~--~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~~~L~C~v~g~-p~p-~v~W 880 (1075)
+.+|+|.|.|.|.|..| .. . ..+.|.|...+ ..+|.+.. .....+.+|+.++|.|.+.|. |.| .|+|
T Consensus 88 ~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~-~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W 166 (228)
T 3bae_H 88 DTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAK-TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTW 166 (228)
T ss_dssp CGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCC-CBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEE
T ss_pred CcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCC-CCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEE
Confidence 99999999999999865 21 1 23567776321 23444332 222235689999999999987 877 9999
Q ss_pred EECCEEcCC--------CCee----EEEECCCCceeeEEEEEEEEeCCeeEEEEE
Q psy16863 881 FKDGRELKA--------GDIH----KIISGEDGTCCLGIYTCEAHNCMGTTSSSA 923 (1075)
Q Consensus 881 ~k~g~~l~~--------~~~~----~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~ 923 (1075)
+|+|..+.. +..+ .|.+......| |.|+|.|.|..|......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~ 220 (228)
T 3bae_H 167 NSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDK 220 (228)
T ss_dssp GGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred eeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEE
Confidence 999875421 1111 23333333334 999999999999865443
No 313
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.66 E-value=2e-15 Score=159.66 Aligned_cols=193 Identities=12% Similarity=0.169 Sum_probs=130.0
Q ss_pred ccceeeccceeEEEEEecCC----CceEEEEe-cCCCeeeEEec--CCCc----cccCCCeEEEee--CCeEEEEEcccC
Q psy16863 250 HDIAVKVGTRARLLVEIRSP----TEIKCQFD-LNNTIPFSFRA--QGDH----PIFGNRFRAINR--DGRTELNIRRVR 316 (1075)
Q Consensus 250 ~~~~v~~g~~~~l~c~~~~~----~~~~c~~~-~~~~~~~~w~~--~~~~----~~~~~~~~~~~~--~~~~~L~I~~~~ 316 (1075)
....+.+|+.++|.|.+.+. ..+.|.-. .+....+..+. .+.. .....++.+..+ .+..+|+|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (256)
T 3umt_A 10 GLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLT 89 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCC
Confidence 44568899999999998752 22322211 11222222111 1110 112456776654 456789999999
Q ss_pred CCCCEEEEEEEEeC----CeeEEEEEEEEEecC------------CCCCCeeeeecCceeeccCCeEEEEEEEecCCCcE
Q psy16863 317 RDDGGRYSVTASNE----SGYSTAKFELSVESQ------------VPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIK 380 (1075)
Q Consensus 317 ~~d~G~Y~C~a~n~----~g~~~~~~~l~V~~~------------~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~ 380 (1075)
.+|+|.|.|.|.|. .+.....+.|.|... ...+|.+...+....+.+|++++|.|.+.+.+.+.
T Consensus 90 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 169 (256)
T 3umt_A 90 SEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSN 169 (256)
T ss_dssp GGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTTC
T ss_pred cccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcE
Confidence 99999999999987 444445567777641 11267777778888999999999999999988889
Q ss_pred EEEEEC--CEecC------------CCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCce-eeEEEEEeecC
Q psy16863 381 IHWYRN--DRKLE------------ENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRS-HCSCELSVLVP 442 (1075)
Q Consensus 381 v~W~k~--g~~l~------------~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~-~~s~~l~V~~~ 442 (1075)
+.|||+ +..+. ...++.....+....|.|.+++.+|+|.|+|.|.|..+.. .....|.|...
T Consensus 170 v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 170 LNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp EEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred EEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECC
Confidence 999994 22211 1356777777778889999999999999999999864332 22456666644
No 314
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.66 E-value=8.4e-16 Score=160.83 Aligned_cols=176 Identities=15% Similarity=0.169 Sum_probs=117.6
Q ss_pred eEEeccceeeeecCCeEEEEEEEecC--CCCeEEEEECC--EE---ee--------------cCCcEEEEEeeC-cEEEE
Q psy16863 750 KFIEGLKSCQATVNEEFKFTVQVSIS--PEPKVSWFRDD--QQ---VV--------------ESDNVKILKETL-GVCHL 807 (1075)
Q Consensus 750 ~~~~~~~~~~~~~g~~~~l~C~v~g~--p~p~v~W~k~g--~~---i~--------------~~~~~~~~~~~~-~~~~L 807 (1075)
.+...+..+.+.+|++++|.|.+.+. +.+.+.|||+. .. +. ...|+.+..+.. +.+.|
T Consensus 3 ~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 82 (242)
T 1hxm_B 3 HLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTL 82 (242)
T ss_dssp EEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEE
T ss_pred ccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEE
Confidence 34445566779999999999999985 67899999953 21 11 235666654332 57899
Q ss_pred EEccccCCCCeEEEEEEEeCCc-----eEE--EEEEEEEEecCC----CCCCeeeeecceeecCCCeEEEEEEEEcc-CC
Q psy16863 808 KIHALEVADQAEWKCIATNDFG-----QSI--TSCFLKLNVPKH----YKKPKFLEELKAVLSEGGAVNLECKVIGV-PQ 875 (1075)
Q Consensus 808 ~I~~~~~~D~G~Y~C~A~N~~G-----~~~--~s~~l~V~~~~~----~~~p~~~~~~~~~~~~g~~~~L~C~v~g~-p~ 875 (1075)
.|.+++.+|+|.|.|.+.|..+ ... ....|.|...+. ...|.+..+....+.+|+.++|.|.+.|. |.
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~ 162 (242)
T 1hxm_B 83 TIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPD 162 (242)
T ss_dssp EECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSC
T ss_pred EECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECC
Confidence 9999999999999999998631 111 235777775321 01122222222235679999999999987 64
Q ss_pred -CeeEEEECCE-EcCCC---------Cee----EEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEE
Q psy16863 876 -PTLKWFKDGR-ELKAG---------DIH----KIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLG 927 (1075)
Q Consensus 876 -p~v~W~k~g~-~l~~~---------~~~----~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 927 (1075)
+.|+|+|+|. ++..+ ..+ .|.+..... + |.|+|.|.|..|.......+.+
T Consensus 163 ~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 163 VIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp CEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred CeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 7899999987 56322 111 344433332 4 9999999999987655555544
No 315
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.66 E-value=2.2e-14 Score=141.65 Aligned_cols=236 Identities=16% Similarity=0.253 Sum_probs=160.5
Q ss_pred eecCceeeccCCeEEEEEEEec-CC---CcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCC
Q psy16863 354 RRLHDIAVKVGTRARLLVEIRS-PT---EIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVG 429 (1075)
Q Consensus 354 ~~~~~~~v~~G~~v~l~C~~~g-~p---~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g 429 (1075)
..|....+..|+.++|.|.+.| .| +..++|+|||..+.... ..|.|..+...|+|.|+|++.+..|
T Consensus 7 ~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGaT----------~tLti~s~t~sdSG~YqCvVTDa~G 76 (304)
T 3shs_A 7 IQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNT----------ATLTVADATSENAGSYKVTVQDTDT 76 (304)
T ss_dssp EEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEEEETTT
T ss_pred eCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCCc----------ceEEeeeccccCCeEEEEEEEECCC
Confidence 3456778899999999999854 55 56999999998876432 1478899999999999999999988
Q ss_pred ceeeEEEEEeecCCCCCCCeee-eecce-EEecCCeEEEEEEE--E-CCC-----CCeEEEEeCCEeccCCCEEEEEeCC
Q psy16863 430 RSHCSCELSVLVPKAYKAPFFT-KELEA-ILTEQGTVSLECKV--M-GIP-----TPQLIWYKDNKKIKAGDIFALTANP 499 (1075)
Q Consensus 430 ~~~~s~~l~V~~~~~~~~p~~~-~~~~~-~~~~g~~v~l~C~~--~-g~p-----~~~v~W~~~g~~l~~~~~~~l~i~~ 499 (1075)
....+..+.|.....+ .+. ..+.. .+..|..+.|.+.+ . |.| ..+|+|+||+..+.... .|++..
T Consensus 77 cs~tSs~VtVT~~a~l---~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgAq--~lT~sS 151 (304)
T 3shs_A 77 MTSVESEVFLMEEAEL---IVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQ--DITIQE 151 (304)
T ss_dssp CCEEECCCEEECBCCE---EEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESSS--EEEECS
T ss_pred CeeeeeeEEEeccCce---eEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCcc--ccceee
Confidence 8776666666654321 111 11222 24567789999988 4 344 46999999999996544 566677
Q ss_pred CCCCCcEEEEEEEEecceeeEEE--EEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEec-
Q psy16863 500 KDPSSLGTYTCEAVNCMGAAFST--SRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLV- 576 (1075)
Q Consensus 500 ~~~~d~G~Y~C~a~n~~g~~~~~--~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~- 576 (1075)
....++|.|+|++.|..+....+ ..+.+.. .++-..-.....+..|+.+.|.-.++.
T Consensus 152 ~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~--------------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (304)
T 3shs_A 152 FTADKNGVYTVKVWGESEDSAASASTKIMLAT--------------------MNVDQDVVESKTVALGNEISLNYVVSED 211 (304)
T ss_dssp CCGGGCEEEEEEEESSSGGGCEEEEEEEEECE--------------------EEEEECCCSEEEEETTSCEEECCEEEEE
T ss_pred EEecCCeEEEEEEEcCCCCcccccceEEEEEc--------------------cccchhheEeehhhcCcEEEEEEEEeec
Confidence 78889999999999987743333 3333321 111112234566888999988876642
Q ss_pred ---C--CCC---ceEEEEeCC-eEE----e------cCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEE
Q psy16863 577 ---P--PWP---RSIYWYNKE-GVV----E------ASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVAT 628 (1075)
Q Consensus 577 ---~--p~p---~~v~W~~~~-~~i----~------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 628 (1075)
. ..| ..+.||... +.+ . .-+.+.+..+| .|.-..+..+|...|-|+|.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 3shs_A 212 IVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDG----HLFKESATYDDTAKFWCVAK 278 (304)
T ss_dssp CCSCCTTCCEEEEEEEEEEECTTCCSCEEEESSSEECGGGEEECTTS----CEEESSCCGGGCEEEEEEEE
T ss_pred cccCCCCCCceEEEEEEEEeecCccCchhhhhhhhhhhccceeCCCc----ceeecccccccchheeeHHH
Confidence 1 112 267898532 111 1 11345555555 56667888999999999986
No 316
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.66 E-value=1.4e-15 Score=160.81 Aligned_cols=168 Identities=16% Similarity=0.269 Sum_probs=119.0
Q ss_pred CeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECC--Eec-------------CCCCcEEEE--EcCCEEEEEEccc
Q psy16863 350 PAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRND--RKL-------------EENKIYRTQ--HDGNFYFIDLSSV 412 (1075)
Q Consensus 350 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g--~~l-------------~~~~~~~~~--~~g~~~~L~I~~v 412 (1075)
..+...+..+.+.+|++++|.|.+.+.|.+.+.|||.. ..+ ....++.+. .......|.|.++
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 83 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 83 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSC
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCC
Confidence 34555667788999999999999999899999999832 111 112344442 3455678999999
Q ss_pred CCCCceeEEEEEEeCCCce----eeEEEEEeecC---------------CCCCCCeeeeecce-EEecCCeEEEEEEEEC
Q psy16863 413 SLFDSGRWTCLAENAVGRS----HCSCELSVLVP---------------KAYKAPFFTKELEA-ILTEQGTVSLECKVMG 472 (1075)
Q Consensus 413 ~~~d~G~Y~C~a~n~~g~~----~~s~~l~V~~~---------------~~~~~p~~~~~~~~-~~~~g~~v~l~C~~~g 472 (1075)
+.+|+|.|.|.|.|..+.. .....|.|... ....+|.+...+.. .+.+|++++|.|.+.+
T Consensus 84 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 163 (256)
T 3tf7_C 84 HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTN 163 (256)
T ss_dssp CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECS
T ss_pred CcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCC
Confidence 9999999999999976522 22346666641 01233455554444 3679999999999988
Q ss_pred CCCCeEEEEeCC--Eec---c----------------------CCCEEEEEeCCCCCCCcEEEEEEEEeccee
Q psy16863 473 IPTPQLIWYKDN--KKI---K----------------------AGDIFALTANPKDPSSLGTYTCEAVNCMGA 518 (1075)
Q Consensus 473 ~p~~~v~W~~~g--~~l---~----------------------~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 518 (1075)
. .+.+.|+|.. ..+ . ......|.|.++..+|+|.|+|.|.|..|.
T Consensus 164 ~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 164 S-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQ 235 (256)
T ss_dssp C-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTE
T ss_pred C-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCc
Confidence 6 6799999832 111 0 123457999999999999999999998664
No 317
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.66 E-value=9.1e-16 Score=163.42 Aligned_cols=168 Identities=17% Similarity=0.248 Sum_probs=116.0
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCC-----CCeEEEEECC--EE---ee---------cCCcEEEEEeeCcEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISP-----EPKVSWFRDD--QQ---VV---------ESDNVKILKETLGVCHL 807 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p-----~p~v~W~k~g--~~---i~---------~~~~~~~~~~~~~~~~L 807 (1075)
..+.+...+....+.+|++++|.|.+.+.| .+.+.|||++ .. +. ...++.+.. ..+...|
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~-~~~~~~L 92 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSG-SGTDFTL 92 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ETTEEEE
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEc-CCCEEEE
Confidence 456677777788899999999999999887 5899999853 21 21 135666654 4457799
Q ss_pred EEccccCCCCeEEEEEEEeCCceEE-EEEEEEEEecCCCCC----C---------------eeeeecceeecCCCeEEEE
Q psy16863 808 KIHALEVADQAEWKCIATNDFGQSI-TSCFLKLNVPKHYKK----P---------------KFLEELKAVLSEGGAVNLE 867 (1075)
Q Consensus 808 ~I~~~~~~D~G~Y~C~A~N~~G~~~-~s~~l~V~~~~~~~~----p---------------~~~~~~~~~~~~g~~~~L~ 867 (1075)
+|.+++.+|+|.|.|.|.|..+... ....|.|..++.... | .+..+....+.+|++++|.
T Consensus 93 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~ 172 (268)
T 1x9q_A 93 KINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLS 172 (268)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEE
T ss_pred EECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEE
Confidence 9999999999999999999865322 245677765432111 1 1122223457899999999
Q ss_pred EEEEccCC--CeeEEEEC--CEEc--------------------CCC----------CeeEEEECCCCceeeEEEEEEEE
Q psy16863 868 CKVIGVPQ--PTLKWFKD--GREL--------------------KAG----------DIHKIISGEDGTCCLGIYTCEAH 913 (1075)
Q Consensus 868 C~v~g~p~--p~v~W~k~--g~~l--------------------~~~----------~~~~i~~~~~~~~d~G~Y~C~a~ 913 (1075)
|.+.|.|. +.+.|||+ |..+ ..+ ....|.+......|+|.|+|.|.
T Consensus 173 C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 252 (268)
T 1x9q_A 173 CVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGA 252 (268)
T ss_dssp EEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEc
Confidence 99998874 78999985 3221 001 12457777888899999999999
Q ss_pred eC
Q psy16863 914 NC 915 (1075)
Q Consensus 914 N~ 915 (1075)
|.
T Consensus 253 ~~ 254 (268)
T 1x9q_A 253 SY 254 (268)
T ss_dssp ET
T ss_pred cC
Confidence 85
No 318
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.66 E-value=2.6e-16 Score=167.89 Aligned_cols=170 Identities=16% Similarity=0.168 Sum_probs=114.2
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEE--CCE------------EeecC----CcEEEEEeeCcEEEEEE
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFR--DDQ------------QVVES----DNVKILKETLGVCHLKI 809 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k--~g~------------~i~~~----~~~~~~~~~~~~~~L~I 809 (1075)
.+.+...+....+.+|++++|.|.+. .|.+.+.||| .+. ..... .++.+.....+.+.|.|
T Consensus 26 ~~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 26 GAGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp -SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred CceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 44555666778899999999999987 6888999999 222 11111 56666544445678999
Q ss_pred ccccCCCCeEEEEEEEeC--CceEEEEEEEEEEecC-CCCCCeee-eecc-eeecCCCeEEEEEEEEccCCC--eeEEEE
Q psy16863 810 HALEVADQAEWKCIATND--FGQSITSCFLKLNVPK-HYKKPKFL-EELK-AVLSEGGAVNLECKVIGVPQP--TLKWFK 882 (1075)
Q Consensus 810 ~~~~~~D~G~Y~C~A~N~--~G~~~~s~~l~V~~~~-~~~~p~~~-~~~~-~~~~~g~~~~L~C~v~g~p~p--~v~W~k 882 (1075)
.+++.+|+|.|.|.|.|. .+.......|.|.... ...+|.+. .... ..+.+|+.++|.|.+.|.|++ .|+|+|
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~ 184 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 184 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEE
Confidence 999999999999999984 3333334567776421 22244432 2222 124568999999999997665 899999
Q ss_pred CCEEcCCC----------------CeeEE----EECCCCcee-eEEEEEEEEeCCee
Q psy16863 883 DGRELKAG----------------DIHKI----ISGEDGTCC-LGIYTCEAHNCMGT 918 (1075)
Q Consensus 883 ~g~~l~~~----------------~~~~i----~~~~~~~~d-~G~Y~C~a~N~~G~ 918 (1075)
||.++..+ ..+.+ .+......| .|.|+|.|.|....
T Consensus 185 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 185 NGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp SSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 99988643 11221 222222234 89999999997543
No 319
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.65 E-value=5.5e-16 Score=158.48 Aligned_cols=175 Identities=11% Similarity=0.091 Sum_probs=118.2
Q ss_pred cccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCC--------------Ccc----ccCCCeEEEee--CCeE
Q psy16863 249 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQG--------------DHP----IFGNRFRAINR--DGRT 308 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~--------------~~~----~~~~~~~~~~~--~~~~ 308 (1075)
+....+.+|+.++|.|.+.+.+. +...+.|++++ +.. ....++.+..+ ++..
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~--------~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 78 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSI--------TSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQY 78 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCG--------GGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEE
T ss_pred CCCEEecCCCcEEEEEEEecccC--------CCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEE
Confidence 45567899999999999875320 11233444321 110 01456776653 3467
Q ss_pred EEEEcccCCCCCEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecC-CCc-EEEEEEC
Q psy16863 309 ELNIRRVRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSP-TEI-KIHWYRN 386 (1075)
Q Consensus 309 ~L~I~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~-p~~-~v~W~k~ 386 (1075)
+|+|.+++.+|+|.|.|.|.|.. .....+.|.|....+.+|.+........+.+|+.++|.|.+.|. |.+ .|+|+|+
T Consensus 79 ~L~I~~v~~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 157 (210)
T 3d9a_H 79 YLDLNSVTTEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG 157 (210)
T ss_dssp EEEECSCCGGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred EEEECCCCcccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeC
Confidence 99999999999999999999853 12223567776544456776655545567899999999999886 777 9999999
Q ss_pred CEecCCCCcEEEEEcCC---EEEEEEcccCCCCceeEEEEEEeCCCceee
Q psy16863 387 DRKLEENKIYRTQHDGN---FYFIDLSSVSLFDSGRWTCLAENAVGRSHC 433 (1075)
Q Consensus 387 g~~l~~~~~~~~~~~g~---~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~ 433 (1075)
|..+.......+..++. ...|.|..+..+| |.|+|.|.|..|....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 158 SLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp TBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred CcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 98653111111112232 2358899988877 9999999999887653
No 320
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.65 E-value=4.7e-15 Score=152.91 Aligned_cols=166 Identities=17% Similarity=0.236 Sum_probs=117.8
Q ss_pred cCceeeccCCeEEEEEEEecCC--CcEEEEEECC--Ee---c----C----------CCCcEEEEEc--CCEEEEEEccc
Q psy16863 356 LHDIAVKVGTRARLLVEIRSPT--EIKIHWYRND--RK---L----E----------ENKIYRTQHD--GNFYFIDLSSV 412 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~g--~~---l----~----------~~~~~~~~~~--g~~~~L~I~~v 412 (1075)
+..+.+.+|++++|.|.+.+.+ .+.+.|||++ .. + . ...|+.+..+ .....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (223)
T 1dee_B 7 SGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSL 86 (223)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCC
Confidence 3577899999999999998765 4789999953 11 1 0 1246666553 34678999999
Q ss_pred CCCCceeEEEEEEeCCC----c--eeeEEEEEeecCCCCCCCeee-eecceEEecCCeEEEEEEEECC-CCC-eEEEEe-
Q psy16863 413 SLFDSGRWTCLAENAVG----R--SHCSCELSVLVPKAYKAPFFT-KELEAILTEQGTVSLECKVMGI-PTP-QLIWYK- 482 (1075)
Q Consensus 413 ~~~d~G~Y~C~a~n~~g----~--~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~v~l~C~~~g~-p~~-~v~W~~- 482 (1075)
+.+|+|.|.|.+.|..| . ......|.|...+. .+|.+. ..+...+.+|+.++|.|.+.|. |.+ .++|++
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~-~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 165 (223)
T 1dee_B 87 RAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSA-SAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYK 165 (223)
T ss_dssp CGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCC-BCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEET
T ss_pred CHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCC-CCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEcc
Confidence 99999999999998753 1 11234677764221 234433 2223335689999999999986 777 999999
Q ss_pred CCEeccC---------CCEE----EEEeCCCCC--CCcEEEEEEEEecceeeEEE
Q psy16863 483 DNKKIKA---------GDIF----ALTANPKDP--SSLGTYTCEAVNCMGAAFST 522 (1075)
Q Consensus 483 ~g~~l~~---------~~~~----~l~i~~~~~--~d~G~Y~C~a~n~~g~~~~~ 522 (1075)
||..+.. +..+ .|.|..... +|.|.|+|.|.|..|.....
T Consensus 166 ~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~ 220 (223)
T 1dee_B 166 NNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKD 220 (223)
T ss_dssp TSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEE
T ss_pred CCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCccc
Confidence 9988743 1222 466766665 78899999999998876543
No 321
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.65 E-value=9.9e-16 Score=158.40 Aligned_cols=171 Identities=20% Similarity=0.227 Sum_probs=116.2
Q ss_pred cCceeeccCCeEEEEEEEecCC--CcEEEEEECC--Ee---c---C-----------CCCcEEEEEc--CCEEEEEEccc
Q psy16863 356 LHDIAVKVGTRARLLVEIRSPT--EIKIHWYRND--RK---L---E-----------ENKIYRTQHD--GNFYFIDLSSV 412 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~g--~~---l---~-----------~~~~~~~~~~--g~~~~L~I~~v 412 (1075)
+..+.+.+|++++|.|.+.+.+ .+.|.|||++ .. + . -..|+.+..+ +....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (227)
T 1mju_H 7 PGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSL 86 (227)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCC
Confidence 4566789999999999998876 6899999964 21 1 1 1346666543 35678999999
Q ss_pred CCCCceeEEEEEEeCCCce-eeEEEEEeecCCCCCCCeee-eecceEEecCCeEEEEEEEECC-CCC-eEEEEeCCEecc
Q psy16863 413 SLFDSGRWTCLAENAVGRS-HCSCELSVLVPKAYKAPFFT-KELEAILTEQGTVSLECKVMGI-PTP-QLIWYKDNKKIK 488 (1075)
Q Consensus 413 ~~~d~G~Y~C~a~n~~g~~-~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~v~l~C~~~g~-p~~-~v~W~~~g~~l~ 488 (1075)
+.+|+|.|.|.+.|..+.. .....|.|...+. .+|.+. ..+...+.+|+.++|.|.+.|. |.+ .|+|++++..+.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~-~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~ 165 (227)
T 1mju_H 87 TSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKT-TAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSG 165 (227)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEECSSCC-BCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred CcccCEEEEEEECCCCceEEcCcEEEEEcCCCC-CCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCC
Confidence 9999999999999864221 1235677765321 233333 2223335679999999999985 777 999999998652
Q ss_pred C--------CCE----EEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEEe
Q psy16863 489 A--------GDI----FALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIAR 528 (1075)
Q Consensus 489 ~--------~~~----~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v~ 528 (1075)
. +.. ..|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 166 ~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~ 216 (227)
T 1mju_H 166 VHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPR 216 (227)
T ss_dssp EEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred cEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCC
Confidence 1 122 257888888777 99999999988776555554443
No 322
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.65 E-value=2.5e-15 Score=154.55 Aligned_cols=164 Identities=16% Similarity=0.208 Sum_probs=119.6
Q ss_pred cCceeeccCCeEEEEEEEecCC--CcEEEEEECC--Ee---cC--------------CCCcEEEEEc--CCEEEEEEccc
Q psy16863 356 LHDIAVKVGTRARLLVEIRSPT--EIKIHWYRND--RK---LE--------------ENKIYRTQHD--GNFYFIDLSSV 412 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~g--~~---l~--------------~~~~~~~~~~--g~~~~L~I~~v 412 (1075)
+..+.+.+|++++|.|.+.+.+ .+.|.|||.. .. +. ...|+.+..+ +....|+|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 4567899999999999998765 6799999853 11 10 1256666654 45678999999
Q ss_pred CCCCceeEEEEEEeCCCc---eeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECC-CC--CeEEEEeCCEe
Q psy16863 413 SLFDSGRWTCLAENAVGR---SHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGI-PT--PQLIWYKDNKK 486 (1075)
Q Consensus 413 ~~~d~G~Y~C~a~n~~g~---~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~-p~--~~v~W~~~g~~ 486 (1075)
+.+|+|.|.|.+.|..+. ......|.|...+. .+|.+.......+.+|+.++|.|.+.+. |. +.|+|++++..
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~-~~P~v~~~~~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~ 165 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESA-RNPTIYPLTLPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKD 165 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCC-BCCEEEEECCCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSS
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecCCCC-CCCEEEEeecccccCCCcEEEEEEEEeEECCCcEEEEEecCCEe
Confidence 999999999999997553 22345677775432 3444443322335689999999999986 76 69999999976
Q ss_pred cc---------CCCEE----EEEeCCCCCCCcEEEEEEEEecceeeE
Q psy16863 487 IK---------AGDIF----ALTANPKDPSSLGTYTCEAVNCMGAAF 520 (1075)
Q Consensus 487 l~---------~~~~~----~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 520 (1075)
+. .+..+ .|.|......|.|.|+|.|.|..|...
T Consensus 166 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 166 ITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred cceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 52 12223 478888888899999999999988654
No 323
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.65 E-value=1.2e-15 Score=157.30 Aligned_cols=167 Identities=17% Similarity=0.224 Sum_probs=118.6
Q ss_pred ecCceeeccCCeEEEEEEEecCC--CcEEEEEECC--Ee---c---CC-------------CCcEEEEEc--CCEEEEEE
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSPT--EIKIHWYRND--RK---L---EE-------------NKIYRTQHD--GNFYFIDL 409 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~g--~~---l---~~-------------~~~~~~~~~--g~~~~L~I 409 (1075)
.+..+.+.+|++++|.|.+.+.+ .+.|.|||++ .. + .. ..|+.+..+ +....|.|
T Consensus 6 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (220)
T 1pz5_B 6 ESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQM 85 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEE
Confidence 34567899999999999998866 6899999963 11 1 00 246666543 34567999
Q ss_pred cccCCCCceeEEEEEEeCCCce-e--eEEEEEeecCCCCCCCeeee-ecceEEecCCeEEEEEEEECC-CCC-eEEEEeC
Q psy16863 410 SSVSLFDSGRWTCLAENAVGRS-H--CSCELSVLVPKAYKAPFFTK-ELEAILTEQGTVSLECKVMGI-PTP-QLIWYKD 483 (1075)
Q Consensus 410 ~~v~~~d~G~Y~C~a~n~~g~~-~--~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~v~l~C~~~g~-p~~-~v~W~~~ 483 (1075)
.+++.+|+|.|.|.+.|..+.. . ..+.|.|...+. .+|.+.. .....+.+|+.++|.|.+.|. |.| .|+|+++
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~-~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 164 (220)
T 1pz5_B 86 NNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATT-TAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYG 164 (220)
T ss_dssp CSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCC-BCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGG
T ss_pred ccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCC-CCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecC
Confidence 9999999999999999976432 1 345677765322 2344432 222235689999999999987 888 9999999
Q ss_pred CEec-----c---CCCE----EEEEeCCCCCCCcEEEEEEEEecceeeEEEE
Q psy16863 484 NKKI-----K---AGDI----FALTANPKDPSSLGTYTCEAVNCMGAAFSTS 523 (1075)
Q Consensus 484 g~~l-----~---~~~~----~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 523 (1075)
+..+ . .... ..|.|.....+| |.|+|.|.|..|....++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 215 (220)
T 1pz5_B 165 ALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIK 215 (220)
T ss_dssp TCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred CcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeee
Confidence 8741 1 1122 247787777666 999999999999765543
No 324
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.65 E-value=5.2e-15 Score=156.47 Aligned_cols=188 Identities=15% Similarity=0.215 Sum_probs=124.4
Q ss_pred ecceEEecCCeEEEEEEEECCC--CCeEEEEeCC--Ee---c-------------------------cCCCEEEEEeCCC
Q psy16863 453 ELEAILTEQGTVSLECKVMGIP--TPQLIWYKDN--KK---I-------------------------KAGDIFALTANPK 500 (1075)
Q Consensus 453 ~~~~~~~~g~~v~l~C~~~g~p--~~~v~W~~~g--~~---l-------------------------~~~~~~~l~i~~~ 500 (1075)
+....+.+|++++|.|.+.+.| .+.+.|+|.. .. + .......|.|.++
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (256)
T 3umt_A 9 SGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSL 88 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCC
Confidence 3344578999999999999876 6799999732 11 1 0123456999999
Q ss_pred CCCCcEEEEEEEEec----ceeeEEEEEEEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEec
Q psy16863 501 DPSSLGTYTCEAVNC----MGAAFSTSRVIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLV 576 (1075)
Q Consensus 501 ~~~d~G~Y~C~a~n~----~g~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~ 576 (1075)
..+|+|.|.|.+.|. .+.......|.|........ ..........++.+...+....+.+|++++|.|.+.+
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 164 (256)
T 3umt_A 89 TSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSG----GGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQ 164 (256)
T ss_dssp CGGGCEEEEEEECCSTTCCSCEECCCEEEEECC-------------------CCCCEEEECSEEEECTTCCEEEEEEESS
T ss_pred CcccCEEEEEEEccCCCccccEECCCEEEEEcCCCcccc----CcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEec
Confidence 999999999999997 33334445677653110000 0000001112556677777889999999999999999
Q ss_pred CCCCceEEEEeC--CeEEe------------cCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCceeeeeEEEE
Q psy16863 577 PPWPRSIYWYNK--EGVVE------------ASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGVKQFSAAYVH 642 (1075)
Q Consensus 577 ~p~p~~v~W~~~--~~~i~------------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~ 642 (1075)
.+.+ .+.||+. +..+. ...++.....+ ..++|+|.+++.+|+|.|.|.|.|..+........|.
T Consensus 165 ~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~ 242 (256)
T 3umt_A 165 DIGS-NLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSG-SDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLE 242 (256)
T ss_dssp CCTT-CEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEET-TEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEE
T ss_pred CCCc-EEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCC-CEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEE
Confidence 8877 8999984 22211 12455554443 4568999999999999999999986544433445666
Q ss_pred EeCC
Q psy16863 643 VLMP 646 (1075)
Q Consensus 643 v~~p 646 (1075)
|..+
T Consensus 243 V~~~ 246 (256)
T 3umt_A 243 IKRA 246 (256)
T ss_dssp EC--
T ss_pred EECC
Confidence 6544
No 325
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.65 E-value=1e-15 Score=158.38 Aligned_cols=180 Identities=14% Similarity=0.135 Sum_probs=121.1
Q ss_pred ccceeeccceeEEEEEecCCCceEEEEecCCC-eeeEEecCCCcccc----------------CCCeEE-------EeeC
Q psy16863 250 HDIAVKVGTRARLLVEIRSPTEIKCQFDLNNT-IPFSFRAQGDHPIF----------------GNRFRA-------INRD 305 (1075)
Q Consensus 250 ~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~-~~~~w~~~~~~~~~----------------~~~~~~-------~~~~ 305 (1075)
+++.+..|+.++|.|.+.+++. +. ..+.|+++++..+. ..+... ....
T Consensus 9 ~~V~~~~G~~v~L~C~~~~~~~--------~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (225)
T 4fmk_A 9 PEVRGRLGGTVELPCHLLPPTT--------ERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADL 80 (225)
T ss_dssp SEEEEETTSCEEECCEECSSCC--------CEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSC
T ss_pred CEEEEecCCCEEEEEEEECCCC--------CceeEEEEEECCCcceEEEecccceeeccccccccceeeecccccccccc
Confidence 4567889999999998875431 11 13566665543321 111111 1112
Q ss_pred CeEEEEEcccCCCCCEEEEEEEEeCCee-EEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEE-ecCCCcEEEE
Q psy16863 306 GRTELNIRRVRRDDGGRYSVTASNESGY-STAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEI-RSPTEIKIHW 383 (1075)
Q Consensus 306 ~~~~L~I~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~-~g~p~~~v~W 383 (1075)
+..+|.|.+++.+|+|.|+|.|.|..+. ......+.+.. +|.+...+.......++.+.+.|.+ .+.|++.+.|
T Consensus 81 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w 156 (225)
T 4fmk_A 81 RDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIA----QPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITW 156 (225)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB----CCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEE
T ss_pred CcEEEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeeec----CCceeecccceeecceeeeeeeeeecCCCCCCEEEE
Confidence 3457999999999999999999997665 33344455543 5555555566667778888887776 5678899999
Q ss_pred EECCEecCCCCcEEEEEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeec
Q psy16863 384 YRNDRKLEENKIYRTQHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLV 441 (1075)
Q Consensus 384 ~k~g~~l~~~~~~~~~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~ 441 (1075)
++++..+..........++.. ..|.|.++..+|+|.|+|.|+|.+|....+..++|.|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V 217 (225)
T 4fmk_A 157 ISSLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSV 217 (225)
T ss_dssp ECSSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCB
T ss_pred EECCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEE
Confidence 999876544333222233332 3699999999999999999999998876666555554
No 326
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.64 E-value=1.1e-15 Score=157.95 Aligned_cols=162 Identities=17% Similarity=0.270 Sum_probs=115.8
Q ss_pred cCceeeccCCeEEEEEEEecCC--CcEEEEEECC--Eec-----------------CCCCcEEEEEc--CCEEEEEEccc
Q psy16863 356 LHDIAVKVGTRARLLVEIRSPT--EIKIHWYRND--RKL-----------------EENKIYRTQHD--GNFYFIDLSSV 412 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~g--~~l-----------------~~~~~~~~~~~--g~~~~L~I~~v 412 (1075)
+..+.+.+|++++|.|.+.+.+ .+.|.|||++ ..+ ....|+.+..+ .....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 4567899999999999998876 6899999853 211 01346666553 45678999999
Q ss_pred CCCCceeEEEEEEeCCC-----c---eeeEEEEEeecCCCCCCCee-eeecceEEecCCeEEEEEEEECC-CCC-eEEEE
Q psy16863 413 SLFDSGRWTCLAENAVG-----R---SHCSCELSVLVPKAYKAPFF-TKELEAILTEQGTVSLECKVMGI-PTP-QLIWY 481 (1075)
Q Consensus 413 ~~~d~G~Y~C~a~n~~g-----~---~~~s~~l~V~~~~~~~~p~~-~~~~~~~~~~g~~v~l~C~~~g~-p~~-~v~W~ 481 (1075)
+.+|+|.|.|.+.|..| . ......|.|...+. .+|.+ ...+...+.+|+.++|.|.+.|. |.+ .|+|+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~-~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 165 (225)
T 1op3_H 87 RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPAST-KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN 165 (225)
T ss_dssp CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSC-BCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECC
T ss_pred ChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCC-cCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEe
Confidence 99999999999999865 2 11345777776322 23333 22322235679999999999986 776 99999
Q ss_pred eCCEecc---------CCCEE----EEEeCCCCCCCcEEEEEEEEecceee
Q psy16863 482 KDNKKIK---------AGDIF----ALTANPKDPSSLGTYTCEAVNCMGAA 519 (1075)
Q Consensus 482 ~~g~~l~---------~~~~~----~l~i~~~~~~d~G~Y~C~a~n~~g~~ 519 (1075)
+++..+. .+..+ .|.|.....+| |.|+|.|.|..+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 215 (225)
T 1op3_H 166 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 215 (225)
T ss_dssp TTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTE
T ss_pred cCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCc
Confidence 9997632 12222 47787777778 99999999987654
No 327
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.64 E-value=2e-16 Score=163.56 Aligned_cols=190 Identities=15% Similarity=0.197 Sum_probs=101.7
Q ss_pred ceEEEEEEecCceEEEEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceee-eecCCeEEEEEEEecCC----CCeE
Q psy16863 706 GSYCCVAKNVMGKAESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQ-ATVNEEFKFTVQVSISP----EPKV 780 (1075)
Q Consensus 706 G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~g~~~~l~C~v~g~p----~p~v 780 (1075)
|.|.|...|..+. +.....+. .|+.++..+.... +..|+.+.|.|.+.|.+ .+.|
T Consensus 1 ~~~~~~~~~~~~~--c~~~~~~~------------------~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v 60 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CPAPELLG------------------GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKF 60 (240)
T ss_dssp ------------------------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEE
T ss_pred CceeeeeeecCCC--CCccccCC------------------CCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEE
Confidence 7899999997764 22221111 3555556665555 56799999999999964 3489
Q ss_pred EEEECCEEeecCCcEEEEEeeCc----EEEEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecc-
Q psy16863 781 SWFRDDQQVVESDNVKILKETLG----VCHLKIHALEVADQAEWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELK- 855 (1075)
Q Consensus 781 ~W~k~g~~i~~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~- 855 (1075)
+|+|||+++............++ ...|.|.....+|.|.|+|.|.|..+.......+.+. .....+|.+.....
T Consensus 61 ~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~-~~~~~~P~V~v~~~~ 139 (240)
T 4acp_A 61 NWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA-KGQPREPQVYTLPPS 139 (240)
T ss_dssp EEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCC-CSCCBCCEEEEECCC
T ss_pred EEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCcccccccccc-CCCCCCCEEEEECCC
Confidence 99999998854211100011111 2468898888899999999999988743222222211 11223454432221
Q ss_pred eeecCCCeEEEEEEEEcc-CCC-eeEEEECCEEcCCCCeeEEEECCCC--------------ceeeEEEEEEEEeCC
Q psy16863 856 AVLSEGGAVNLECKVIGV-PQP-TLKWFKDGRELKAGDIHKIISGEDG--------------TCCLGIYTCEAHNCM 916 (1075)
Q Consensus 856 ~~~~~g~~~~L~C~v~g~-p~p-~v~W~k~g~~l~~~~~~~i~~~~~~--------------~~d~G~Y~C~a~N~~ 916 (1075)
....+|+.++|.|.+.|. |.+ .|+|+|||.++.......+....++ ..+.|.|+|.|.|..
T Consensus 140 ~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 140 RDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp GGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred hHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 112248899999999994 553 7999999998753211111111111 124699999999964
No 328
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.64 E-value=1.7e-15 Score=156.17 Aligned_cols=162 Identities=19% Similarity=0.328 Sum_probs=111.4
Q ss_pred eeeeecCCeEEEEEEEecCC--CCeEEEEECC--EE---e---e-------------cCCcEEEEEee-CcEEEEEEccc
Q psy16863 757 SCQATVNEEFKFTVQVSISP--EPKVSWFRDD--QQ---V---V-------------ESDNVKILKET-LGVCHLKIHAL 812 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~~---i---~-------------~~~~~~~~~~~-~~~~~L~I~~~ 812 (1075)
...+.+|++++|.|.+.+.+ .+.+.|||.. .. + . ...|+.+..+. .+.+.|.|.++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 88 (221)
T 3m8o_H 9 GGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSL 88 (221)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSC
T ss_pred CEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCC
Confidence 45688999999999999754 6799999842 11 1 0 12567665543 45778999999
Q ss_pred cCCCCeEEEEEEEeCC--ceEEEEEEEEEEecCCCCCCeee-eecceeecCCCeEEEEEEEEc-cCC--CeeEEEECCEE
Q psy16863 813 EVADQAEWKCIATNDF--GQSITSCFLKLNVPKHYKKPKFL-EELKAVLSEGGAVNLECKVIG-VPQ--PTLKWFKDGRE 886 (1075)
Q Consensus 813 ~~~D~G~Y~C~A~N~~--G~~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~~~L~C~v~g-~p~--p~v~W~k~g~~ 886 (1075)
+.+|+|.|.|.+.|.. ........|.|...+ ..+|.+. ...... .+|+.++|.|.+.| .|. +.|+|+|||.+
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~-~~~p~v~~~~~~~~-~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~ 166 (221)
T 3m8o_H 89 KSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSAS-PTSPKVFPLSLCST-QPDGNVVIACLVQGFFPQEPLSVTWSESGQG 166 (221)
T ss_dssp CGGGCEEEEEEEESCTTCCCBBCCEEEEECSCC-CBCCEEEEEECCSC-CCTTEEEEEEEEEEEBSSCSEEEEESCCSTT
T ss_pred CHHHCEEEEEEEECCChhheECCCEEEEEecCC-CCCCeEEEecCccc-ccCCCEEEEEEEEeeECCCCEEEEEEECCEE
Confidence 9999999999999874 112223456665322 2344443 222222 68999999999998 676 48999999987
Q ss_pred c----------CCCCeeE----EEECCCCceeeEEEEEEEEeCCeeEE
Q psy16863 887 L----------KAGDIHK----IISGEDGTCCLGIYTCEAHNCMGTTS 920 (1075)
Q Consensus 887 l----------~~~~~~~----i~~~~~~~~d~G~Y~C~a~N~~G~~~ 920 (1075)
+ ..+..+. |.+......|.|.|+|.|.|..|...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 167 VTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp CEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCCE
T ss_pred CceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCce
Confidence 6 2333332 44444444578999999999987653
No 329
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.64 E-value=1.1e-15 Score=133.85 Aligned_cols=93 Identities=14% Similarity=0.248 Sum_probs=85.0
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCC--CcEEEEEcCCEEEEEEcccCCCCceeEEEEEE
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEEN--KIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~--~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
.||.|...+.++.+.+|+++.|.|.+.|.|.|.|+|+|||..|... .++.+...+..++|.|.+++.+|+|.|+|.|+
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 4788988889999999999999999999999999999999999765 36788888888899999999999999999999
Q ss_pred eCCCceeeEEEEEee
Q psy16863 426 NAVGRSHCSCELSVL 440 (1075)
Q Consensus 426 n~~g~~~~s~~l~V~ 440 (1075)
|..|....++.|.|.
T Consensus 84 N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 84 NEFGSDSATVNIHIR 98 (100)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred ECCCEEEEEEEEEEE
Confidence 999999888888875
No 330
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.64 E-value=5e-15 Score=156.75 Aligned_cols=184 Identities=12% Similarity=0.173 Sum_probs=122.8
Q ss_pred cccccccceeeccceeEEEEEecCC----CceEEEEec-CCCeeeE-EecCCCcc----ccCCCeEEEee--CCeEEEEE
Q psy16863 245 FIRRLHDIAVKVGTRARLLVEIRSP----TEIKCQFDL-NNTIPFS-FRAQGDHP----IFGNRFRAINR--DGRTELNI 312 (1075)
Q Consensus 245 ~~~~~~~~~v~~g~~~~l~c~~~~~----~~~~c~~~~-~~~~~~~-w~~~~~~~----~~~~~~~~~~~--~~~~~L~I 312 (1075)
.+..+....+.+|+.++|.|.+.+. ..+.|.... +....+. +...++.. ....++.+..+ .+..+|+|
T Consensus 11 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 90 (257)
T 3gkz_A 11 QLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQL 90 (257)
T ss_dssp EEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred EEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEE
Confidence 3445566779999999999998752 222221110 1111111 11111111 11356666643 45678999
Q ss_pred cccCCCCCEEEEEEEEeC----CeeEEEEEEEEEecCC----------CCCCeeeeecCceeeccCCeEEEEEEEecCCC
Q psy16863 313 RRVRRDDGGRYSVTASNE----SGYSTAKFELSVESQV----------PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTE 378 (1075)
Q Consensus 313 ~~~~~~d~G~Y~C~a~n~----~g~~~~~~~l~V~~~~----------~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~ 378 (1075)
.+++.+|+|.|.|.|.|. .......+.|.|.... ..+|.+...+....+.+|++++|.|.+.+.+.
T Consensus 91 ~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~ 170 (257)
T 3gkz_A 91 KSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVS 170 (257)
T ss_dssp CSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCC
T ss_pred CCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCcc
Confidence 999999999999999996 2223445667776420 12466666677789999999999999988777
Q ss_pred c-EEEEEEC--CEecC------------CCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCC
Q psy16863 379 I-KIHWYRN--DRKLE------------ENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAV 428 (1075)
Q Consensus 379 ~-~v~W~k~--g~~l~------------~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~ 428 (1075)
+ .+.|||+ +..+. ...++.....+....|.|.+++.+|+|.|.|.|.|..
T Consensus 171 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 235 (257)
T 3gkz_A 171 SSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSF 235 (257)
T ss_dssp GGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred ceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCC
Confidence 6 9999994 33221 1256666667777889999999999999999998754
No 331
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.64 E-value=6.9e-16 Score=152.50 Aligned_cols=153 Identities=14% Similarity=0.209 Sum_probs=109.7
Q ss_pred CceeeccCCeEEEEEEEec-CCCcEEEEEEC-CEecC------------CC--CcEEEEEcCCEEEEEEcccCCCCceeE
Q psy16863 357 HDIAVKVGTRARLLVEIRS-PTEIKIHWYRN-DRKLE------------EN--KIYRTQHDGNFYFIDLSSVSLFDSGRW 420 (1075)
Q Consensus 357 ~~~~v~~G~~v~l~C~~~g-~p~~~v~W~k~-g~~l~------------~~--~~~~~~~~g~~~~L~I~~v~~~d~G~Y 420 (1075)
..+.+.+|++++|.|.+.+ .+.+.|.|+|+ +..+. .. .|+.+.. ....|.|.+++.+|+|.|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~--~~~sL~I~~v~~~D~G~Y 84 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDK--TNGALRIYNVSKEDRGDY 84 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECT--TTCCEEECSCCGGGCEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeC--CCccEEEcCCCHHHCeEE
Confidence 4567899999999999854 34689999995 32221 11 3444411 112489999999999999
Q ss_pred EEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEE-ECCCCCeEEEEeCCEeccCCCEEEEEeCC
Q psy16863 421 TCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKV-MGIPTPQLIWYKDNKKIKAGDIFALTANP 499 (1075)
Q Consensus 421 ~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~v~W~~~g~~l~~~~~~~l~i~~ 499 (1075)
+|.+.+.. .....+.|.|..++ ..|.+.. .+..+.|.|.+ .| |.|.|+|++++..+.......|.+..
T Consensus 85 ~C~v~~~~-~~~~~~~L~V~~~~--~~P~i~~-------~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~~~~~~l~~~~ 153 (180)
T 2dru_A 85 YMRMLHET-EDQWKITMEVYEMV--SKPMIYW-------ECSNATLTCEVLEG-TDVELKLYQGKEHLRSLRQKTMSYQW 153 (180)
T ss_dssp EEEEESSS-EEEEEEEEEEECCC--CCCEEEE-------EGGGTEEEEECSSC-TTCEEEEEETTEEEEEESSSEEEEEC
T ss_pred EEEEEcCC-eEEEEEEEEEECCC--CCCEEEe-------cCCCEEEEEEeCCC-CCCEEEEEECCeECcCCCCCEEEEEE
Confidence 99998876 55666777777643 2344332 34569999999 56 99999999999998633334555533
Q ss_pred CCCCCcEEEEEEEEecceeeEEEEE
Q psy16863 500 KDPSSLGTYTCEAVNCMGAAFSTSR 524 (1075)
Q Consensus 500 ~~~~d~G~Y~C~a~n~~g~~~~~~~ 524 (1075)
.+|+|.|+|.|.|..|...+...
T Consensus 154 --~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 154 --TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp --SCCSSCEEEEEEETTEEEEEEEC
T ss_pred --hhcCccEEEEEecCcCcccccee
Confidence 67899999999999998766543
No 332
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.63 E-value=8.3e-16 Score=157.60 Aligned_cols=166 Identities=17% Similarity=0.271 Sum_probs=111.7
Q ss_pred ceeeeecCCeEEEEEEEecCC--CCeEEEEECC--EEe---e-------------cCCcEEEEEee-CcEEEEEEccccC
Q psy16863 756 KSCQATVNEEFKFTVQVSISP--EPKVSWFRDD--QQV---V-------------ESDNVKILKET-LGVCHLKIHALEV 814 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~~i---~-------------~~~~~~~~~~~-~~~~~L~I~~~~~ 814 (1075)
....+.+|++++|.|.+.+.| .+.+.|||++ ..+ . ...++.+..+. .+.+.|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (215)
T 1c5d_H 8 GPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQT 87 (215)
T ss_dssp CCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCG
T ss_pred CCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCc
Confidence 445688999999999999865 5789999862 211 0 12466665432 3467999999999
Q ss_pred CCCeEEEEEEEeCCce---EEEEEEEEEEecCCCCCCeeee-ecceeecCCCeEEEEEEEEcc-CCC-eeEEEECCEEcC
Q psy16863 815 ADQAEWKCIATNDFGQ---SITSCFLKLNVPKHYKKPKFLE-ELKAVLSEGGAVNLECKVIGV-PQP-TLKWFKDGRELK 888 (1075)
Q Consensus 815 ~D~G~Y~C~A~N~~G~---~~~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~~~L~C~v~g~-p~p-~v~W~k~g~~l~ 888 (1075)
+|+|.|.|.|.|..|. ....+.|.|...+ ..+|.+.. .....+.+|+.++|.|.+.|. |.| .|+|+|+|..+.
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~ 166 (215)
T 1c5d_H 88 EDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQ-TTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSD 166 (215)
T ss_dssp GGCEEEEEEECCSSSCSCCBCCCEEEEECSSC-CBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCS
T ss_pred ccCEEEEEEEecCCcccceEcCCEEEEecCCC-CCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCc
Confidence 9999999999997432 1123567776322 12344332 222235689999999999997 887 999999987643
Q ss_pred C--------CCeeEEE--ECCCCceeeEEEEEEEEeCCeeEEEEE
Q psy16863 889 A--------GDIHKII--SGEDGTCCLGIYTCEAHNCMGTTSSSA 923 (1075)
Q Consensus 889 ~--------~~~~~i~--~~~~~~~d~G~Y~C~a~N~~G~~~~~~ 923 (1075)
. +..+.+. +......| |.|+|.|.|..|......
T Consensus 167 ~~~~~~~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~~ 210 (215)
T 1c5d_H 167 VHTFPAVLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVDK 210 (215)
T ss_dssp CCBCCCEEETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEEE
T ss_pred eEecCcccCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccEEE
Confidence 1 1223221 11222234 999999999999865443
No 333
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.63 E-value=3.3e-16 Score=159.49 Aligned_cols=156 Identities=15% Similarity=0.201 Sum_probs=94.7
Q ss_pred ecCCeEEEEEEEecCC----CCeEEEEECCEEeecCCcEEEEEeeCcE----EEEEEccccCCCCeEEEEEEEeCCceEE
Q psy16863 761 TVNEEFKFTVQVSISP----EPKVSWFRDDQQVVESDNVKILKETLGV----CHLKIHALEVADQAEWKCIATNDFGQSI 832 (1075)
Q Consensus 761 ~~g~~~~l~C~v~g~p----~p~v~W~k~g~~i~~~~~~~~~~~~~~~----~~L~I~~~~~~D~G~Y~C~A~N~~G~~~ 832 (1075)
..|+++.|.|.+.|.| .+.|+|+|+|.++............++. ..|.|.....+|+|.|+|.|.|..|...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 6899999999999875 3499999999887543110000111221 2344555556669999999999988653
Q ss_pred EEEEEEEEecCCCCCCeeee-ecceeecCCCeEEEEEEEEcc-CC-CeeEEEECCEEcCCCCeeEEEECCCC--------
Q psy16863 833 TSCFLKLNVPKHYKKPKFLE-ELKAVLSEGGAVNLECKVIGV-PQ-PTLKWFKDGRELKAGDIHKIISGEDG-------- 901 (1075)
Q Consensus 833 ~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~~~L~C~v~g~-p~-p~v~W~k~g~~l~~~~~~~i~~~~~~-------- 901 (1075)
.+..+.+ ......+|.+.. ........|+.++|.|.+.|. |. +.|+|+|||.++.......+....++
T Consensus 96 ~~~~v~~-~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l 174 (207)
T 1l6x_A 96 IEKTISK-AKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL 174 (207)
T ss_dssp EEEEECC-CCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEE
T ss_pred eEEEecc-CCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEE
Confidence 3333321 001123344322 111112246679999999996 44 38999999998863211111111121
Q ss_pred ------ceeeEEEEEEEEeCCe
Q psy16863 902 ------TCCLGIYTCEAHNCMG 917 (1075)
Q Consensus 902 ------~~d~G~Y~C~a~N~~G 917 (1075)
..|.|.|+|.|.|...
T Consensus 175 ~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 175 TVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp EEEHHHHHTTCCEEEEEECTTS
T ss_pred EECHHHcCCCCEEEEEEEcCCc
Confidence 1247999999999764
No 334
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.63 E-value=7.1e-15 Score=145.93 Aligned_cols=148 Identities=15% Similarity=0.241 Sum_probs=110.9
Q ss_pred eeeccCCeEEEEEEEecCCCc--EEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEE
Q psy16863 359 IAVKVGTRARLLVEIRSPTEI--KIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCE 436 (1075)
Q Consensus 359 ~~v~~G~~v~l~C~~~g~p~~--~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~ 436 (1075)
+.+..|++++|.|.+ +.|.+ .|+|++.+..+ .+.. .......|.|.+++.+|+|.|.|.|.|..|....++.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~--~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ 90 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQ--SDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQ 90 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEE--EESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEE--ecCCccEEEECccCcccCceEEEEEEeCCCceEEEEE
Confidence 689999999999999 88777 99999976555 2222 2345567999999999999999999999888888899
Q ss_pred EEeecCCCCCCCeeeeecceEEecCCeEEEEEEEECC-CC----CeEEEEeCCEeccCCCE-------------------
Q psy16863 437 LSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMGI-PT----PQLIWYKDNKKIKAGDI------------------- 492 (1075)
Q Consensus 437 l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~-p~----~~v~W~~~g~~l~~~~~------------------- 492 (1075)
|+|..+|.. ....+. .+.+|+.+ |.|.+.|. |. ++|+|+|||++|.....
T Consensus 91 ltV~~~P~~----~~i~~~-~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 164 (210)
T 1gsm_A 91 LLVYAFPNQ----LTVSPA-ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVL 164 (210)
T ss_dssp EEEEBCCSE----EEEESS-SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCC
T ss_pred EEEEecCCC----cEEccc-eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceE
Confidence 999887642 111222 46678888 99999985 64 48999999999853311
Q ss_pred E----EEEeCCCCCCCcEEEEEEEEeccee
Q psy16863 493 F----ALTANPKDPSSLGTYTCEAVNCMGA 518 (1075)
Q Consensus 493 ~----~l~i~~~~~~d~G~Y~C~a~n~~g~ 518 (1075)
+ ++.+......|.+.|+|.|.+..-.
T Consensus 165 ~~vts~~~~~~~~~D~~~~~tC~a~~~L~~ 194 (210)
T 1gsm_A 165 FRVTERWRLPPLGTPVPPALYCQATMRLPG 194 (210)
T ss_dssp EEEEEEEECCCCCSSCCSEEEEEEEEEETT
T ss_pred EEEEEEEeecCCcccCCceEEEEEEeeCCC
Confidence 1 1223355556668999999986533
No 335
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.63 E-value=8.3e-17 Score=167.76 Aligned_cols=167 Identities=15% Similarity=0.286 Sum_probs=98.3
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECC--Eec------------CCCCcEEEEEcCCEEEEEEcccCC
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRND--RKL------------EENKIYRTQHDGNFYFIDLSSVSL 414 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g--~~l------------~~~~~~~~~~~g~~~~L~I~~v~~ 414 (1075)
.+.+...+..+.+.+|++++|.|.+.+.|.+.|.|||++ ..+ ....++.....+....|.|.+++.
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 102 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS 102 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH
Confidence 344555677888999999999999988877889999964 211 012344333344455799999999
Q ss_pred CCceeEEEEEEeCCCcee-eEEEEEeecCCCCCCCeeeeec-ceEEecCCeEEEEEEEECC-CCC-eEEEEeCCEeccCC
Q psy16863 415 FDSGRWTCLAENAVGRSH-CSCELSVLVPKAYKAPFFTKEL-EAILTEQGTVSLECKVMGI-PTP-QLIWYKDNKKIKAG 490 (1075)
Q Consensus 415 ~d~G~Y~C~a~n~~g~~~-~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~v~l~C~~~g~-p~~-~v~W~~~g~~l~~~ 490 (1075)
+|+|.|.|.|.|..+... ....|.|...+ .+|.+.... .....+|+.++|.|.+.|. |++ .|+|+|||+++..+
T Consensus 103 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~--~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 180 (233)
T 3bqu_C 103 EDVADYYCLQSDNLPYTFGGGTNLEIKRAD--AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 180 (233)
T ss_dssp CCCSEEEEEECSSSSCCBCCCCBC---CCC--BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CC
T ss_pred HHCEEEEEEEecCCceeecCCEEEEEeCCC--CCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCC
Confidence 999999999998765332 22345554432 244444322 2223468999999999985 443 79999999887544
Q ss_pred -----------C-----EEEEEeCCCCCCCcEEEEEEEEecce
Q psy16863 491 -----------D-----IFALTANPKDPSSLGTYTCEAVNCMG 517 (1075)
Q Consensus 491 -----------~-----~~~l~i~~~~~~d~G~Y~C~a~n~~g 517 (1075)
+ ...|.|.....+|+|.|+|.|.|...
T Consensus 181 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 181 VLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred ceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 0 12467777777889999999999653
No 336
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.63 E-value=9.8e-16 Score=162.37 Aligned_cols=168 Identities=12% Similarity=0.101 Sum_probs=103.4
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEEC--C-E--Eee-cC--------------CcEEEEEeeCcEEEE
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRD--D-Q--QVV-ES--------------DNVKILKETLGVCHL 807 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~--g-~--~i~-~~--------------~~~~~~~~~~~~~~L 807 (1075)
+|.+...+....+.+|++++|.|.+.+.|.+.+.|||. + . .+. .. .++.......+...|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 34555566678899999999999999999999999992 2 1 111 00 111111122234579
Q ss_pred EEccccCCCCeEEEEEEEeCCc---eEEEEEEEEEEecCCCC------------CCeeeeecc-eeecCCCeEEEEEEEE
Q psy16863 808 KIHALEVADQAEWKCIATNDFG---QSITSCFLKLNVPKHYK------------KPKFLEELK-AVLSEGGAVNLECKVI 871 (1075)
Q Consensus 808 ~I~~~~~~D~G~Y~C~A~N~~G---~~~~s~~l~V~~~~~~~------------~p~~~~~~~-~~~~~g~~~~L~C~v~ 871 (1075)
.|.+++.+|+|.|.|.|.|..| .......|.|..+.... .|.+...+. ..+.+|++++|.|.+.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 161 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYE 161 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEE
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECC
Confidence 9999999999999999999877 23334667776542111 234444443 3477999999999998
Q ss_pred cc-CCCeeEEEECC--EEcC-----------------------CCCeeEEEECCCCceeeEEEEEEEEeC
Q psy16863 872 GV-PQPTLKWFKDG--RELK-----------------------AGDIHKIISGEDGTCCLGIYTCEAHNC 915 (1075)
Q Consensus 872 g~-p~p~v~W~k~g--~~l~-----------------------~~~~~~i~~~~~~~~d~G~Y~C~a~N~ 915 (1075)
+. |.+.+.|||++ ..+. .+....|.+......|+|.|.|.|.+.
T Consensus 162 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 162 TSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp CCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred CccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 75 78899999843 1110 112234777778889999999999864
No 337
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.63 E-value=1.5e-15 Score=162.71 Aligned_cols=171 Identities=15% Similarity=0.174 Sum_probs=117.7
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECC--EE---e----------e----cCCcEEEEEeeCcEEEEE
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDD--QQ---V----------V----ESDNVKILKETLGVCHLK 808 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g--~~---i----------~----~~~~~~~~~~~~~~~~L~ 808 (1075)
.+.+...+..+.+.+|++++|.|.+.+.|.+.+.|||++ .. + . ...++.+..+..+...|.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 456677777888999999999999998899999999964 11 1 0 134677665445678999
Q ss_pred EccccCCCCeEEEEEEEeCCc----e--EEEEEEEEEEecC-CCCCCeeeee-cc-eeecCCCeEEEEEEEEcc-CC-Ce
Q psy16863 809 IHALEVADQAEWKCIATNDFG----Q--SITSCFLKLNVPK-HYKKPKFLEE-LK-AVLSEGGAVNLECKVIGV-PQ-PT 877 (1075)
Q Consensus 809 I~~~~~~D~G~Y~C~A~N~~G----~--~~~s~~l~V~~~~-~~~~p~~~~~-~~-~~~~~g~~~~L~C~v~g~-p~-p~ 877 (1075)
|.+++.+|+|.|+|.|.|..| . ......|.|..+. ...+|.+... .. ..+.+|+.++|.|.+.|. |. |.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 183 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 183 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcE
Confidence 999999999999999999432 1 1123567776532 1234544321 11 124478999999999997 43 68
Q ss_pred eEEEECCEEcCCCC----------------eeE----EEECCCCce-eeEEEEEEEEeCCee
Q psy16863 878 LKWFKDGRELKAGD----------------IHK----IISGEDGTC-CLGIYTCEAHNCMGT 918 (1075)
Q Consensus 878 v~W~k~g~~l~~~~----------------~~~----i~~~~~~~~-d~G~Y~C~a~N~~G~ 918 (1075)
|+|+|||+++..+. .+. |.+...... +.|.|+|.|.|....
T Consensus 184 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 184 LSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 245 (279)
T ss_dssp EEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBC
T ss_pred EEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCC
Confidence 99999999886431 111 333332222 368899999997654
No 338
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.63 E-value=4.4e-16 Score=160.67 Aligned_cols=167 Identities=17% Similarity=0.172 Sum_probs=118.4
Q ss_pred cCceeeccCCeEEEEEEEec-CCCc----EEEEEECCEecC-------------CCCcEEEEE-----cCCEEEEEEccc
Q psy16863 356 LHDIAVKVGTRARLLVEIRS-PTEI----KIHWYRNDRKLE-------------ENKIYRTQH-----DGNFYFIDLSSV 412 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g-~p~~----~v~W~k~g~~l~-------------~~~~~~~~~-----~g~~~~L~I~~v 412 (1075)
+..+.+.+|++++|.|.+.+ .+.+ .|.|+|++.... ...++.+.. ......|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 34567889999999999944 3433 599999975321 133444443 112346999999
Q ss_pred CCCCceeEEEEEEeCC-CceeeEEEEEeecCCCCCCCeeeeecceEEecCCeE-EEEEEEE-CCCCCeEEEEeCCEeccC
Q psy16863 413 SLFDSGRWTCLAENAV-GRSHCSCELSVLVPKAYKAPFFTKELEAILTEQGTV-SLECKVM-GIPTPQLIWYKDNKKIKA 489 (1075)
Q Consensus 413 ~~~d~G~Y~C~a~n~~-g~~~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v-~l~C~~~-g~p~~~v~W~~~g~~l~~ 489 (1075)
+.+|+|.|+|.+.|.. |.....+.|.|..+| .+.........+|+.+ .|.|.+. |.|.|.|+|++++.....
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P-----~~~~~~~~~~~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~ 160 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKP-----QNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQ 160 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCCCC-----EEEEEEECCCCCSSSCCEEEEEEESCSSCCCEEEECSSSCCCC
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEECC-----CceeecCCcccCCceEEEEEEECCCccCCCeeEEEeCCCCCCc
Confidence 9999999999999976 666767777777644 3332222222578888 5999988 899999999987543321
Q ss_pred ------------CCEEEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEE
Q psy16863 490 ------------GDIFALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIA 527 (1075)
Q Consensus 490 ------------~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v 527 (1075)
.....|.|......|+|.|+|.|.|..+.......|..
T Consensus 161 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~ 210 (221)
T 3eow_R 161 TSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSL 210 (221)
T ss_dssp CEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECC
T ss_pred cceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEE
Confidence 11346889999999999999999999887655554443
No 339
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.63 E-value=5.1e-15 Score=157.59 Aligned_cols=167 Identities=14% Similarity=0.260 Sum_probs=117.8
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCC-----CcEEEEEECC--Ee---cC---------CCCcEEEEEcCCEEEEEE
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPT-----EIKIHWYRND--RK---LE---------ENKIYRTQHDGNFYFIDL 409 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p-----~~~v~W~k~g--~~---l~---------~~~~~~~~~~g~~~~L~I 409 (1075)
.+.+...+..+.+.+|++++|.|.+.+.+ .+.+.|||++ .. +. ...++.+...+....|.|
T Consensus 15 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I 94 (268)
T 1x9q_A 15 DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKI 94 (268)
T ss_dssp CCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEE
Confidence 45566677788999999999999998876 5899999953 21 10 135677766677778999
Q ss_pred cccCCCCceeEEEEEEeCCCce-eeEEEEEeecCCCCCC----C---------------eeeeecceEEecCCeEEEEEE
Q psy16863 410 SSVSLFDSGRWTCLAENAVGRS-HCSCELSVLVPKAYKA----P---------------FFTKELEAILTEQGTVSLECK 469 (1075)
Q Consensus 410 ~~v~~~d~G~Y~C~a~n~~g~~-~~s~~l~V~~~~~~~~----p---------------~~~~~~~~~~~~g~~v~l~C~ 469 (1075)
.+++.+|+|.|.|.+.|..+.. .....|.|..++.... | .+..+....+.+|++++|.|.
T Consensus 95 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~ 174 (268)
T 1x9q_A 95 NRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCV 174 (268)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEE
T ss_pred CCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEE
Confidence 9999999999999999875532 2345677765432111 1 122223345889999999999
Q ss_pred EECCCC--CeEEEEeC--CEecc--------------------C----------CCEEEEEeCCCCCCCcEEEEEEEEec
Q psy16863 470 VMGIPT--PQLIWYKD--NKKIK--------------------A----------GDIFALTANPKDPSSLGTYTCEAVNC 515 (1075)
Q Consensus 470 ~~g~p~--~~v~W~~~--g~~l~--------------------~----------~~~~~l~i~~~~~~d~G~Y~C~a~n~ 515 (1075)
+.+.|. +.+.|+|+ ++.+. . .....|.|.++..+|+|.|+|.|.|.
T Consensus 175 ~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 175 TSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp EESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred ecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 998764 79999985 22110 0 11357999999999999999999984
No 340
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.63 E-value=2.1e-15 Score=162.42 Aligned_cols=164 Identities=13% Similarity=0.193 Sum_probs=113.0
Q ss_pred cceeeeecCCeEEEEEEEecCC--CCeEEEEECC--EE---ee--------------cCCcEEEEEe-eCcEEEEEEccc
Q psy16863 755 LKSCQATVNEEFKFTVQVSISP--EPKVSWFRDD--QQ---VV--------------ESDNVKILKE-TLGVCHLKIHAL 812 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~~---i~--------------~~~~~~~~~~-~~~~~~L~I~~~ 812 (1075)
+....+.+|++++|.|.+.+.| .+.+.|||++ .. +. ...++.+..+ ..+...|+|.++
T Consensus 29 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 108 (291)
T 2gki_A 29 SGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSL 108 (291)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSC
T ss_pred CCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcC
Confidence 3457789999999999999877 6899999953 21 10 1245655443 234678999999
Q ss_pred cCCCCeEEEEEEEeCC-c--eEE--EEEEEEEEec-----------CCCCCCeeeeecce-eecCCCeEEEEEEEEccCC
Q psy16863 813 EVADQAEWKCIATNDF-G--QSI--TSCFLKLNVP-----------KHYKKPKFLEELKA-VLSEGGAVNLECKVIGVPQ 875 (1075)
Q Consensus 813 ~~~D~G~Y~C~A~N~~-G--~~~--~s~~l~V~~~-----------~~~~~p~~~~~~~~-~~~~g~~~~L~C~v~g~p~ 875 (1075)
+.+|+|.|.|.|.|.. | ... ....|.|..+ +...++.+...+.. .+.+|++++|.|.+.+.|.
T Consensus 109 ~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~ 188 (291)
T 2gki_A 109 TSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLF 188 (291)
T ss_dssp CGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCCE
T ss_pred CHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCccc
Confidence 9999999999999975 2 111 2346666551 11123334433333 4779999999999999887
Q ss_pred C------eeEEEEC--CEEcC---------------------CCCeeEEEECCCCceeeEEEEEEEEeCCee
Q psy16863 876 P------TLKWFKD--GRELK---------------------AGDIHKIISGEDGTCCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 876 p------~v~W~k~--g~~l~---------------------~~~~~~i~~~~~~~~d~G~Y~C~a~N~~G~ 918 (1075)
+ .+.|||+ |..+. .+....|.+......|+|.|+|.|.|....
T Consensus 189 ~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~ 260 (291)
T 2gki_A 189 NSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMY 260 (291)
T ss_dssp ETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred cccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCce
Confidence 6 8999996 32110 012346778888889999999999996543
No 341
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.62 E-value=3.3e-15 Score=154.75 Aligned_cols=165 Identities=20% Similarity=0.270 Sum_probs=114.4
Q ss_pred cCceeeccCCeEEEEEEEecCCC----cEEEEEECC--EecC----------------CCCcEEEEEc--CCEEEEEEcc
Q psy16863 356 LHDIAVKVGTRARLLVEIRSPTE----IKIHWYRND--RKLE----------------ENKIYRTQHD--GNFYFIDLSS 411 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~p~----~~v~W~k~g--~~l~----------------~~~~~~~~~~--g~~~~L~I~~ 411 (1075)
+..+.+.+|++++|.|.+.+.+. +.|.|||++ ..+. ...|+.+..+ +....|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 45678999999999999988764 899999852 2210 1246666543 3456899999
Q ss_pred cCCCCceeEEEEEEeCCC------c---eeeEEEEEeecCCCCCCCeee-eecceEEecCCeEEEEEEEECC-CCC-eEE
Q psy16863 412 VSLFDSGRWTCLAENAVG------R---SHCSCELSVLVPKAYKAPFFT-KELEAILTEQGTVSLECKVMGI-PTP-QLI 479 (1075)
Q Consensus 412 v~~~d~G~Y~C~a~n~~g------~---~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~v~l~C~~~g~-p~~-~v~ 479 (1075)
++.+|+|.|.|.+.|..| . ....+.|.|...+ ..+|.+. ..+...+.+|+.+.|.|.+.|. |.+ .|+
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~-~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~ 165 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAK-TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLT 165 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCC-CBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCC-CCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEE
Confidence 999999999999999765 1 1123677776422 1234443 2323335789999999999986 877 999
Q ss_pred EEeCCEeccC--------CCE----EEEEeCCCCCCCcEEEEEEEEecceeeEEE
Q psy16863 480 WYKDNKKIKA--------GDI----FALTANPKDPSSLGTYTCEAVNCMGAAFST 522 (1075)
Q Consensus 480 W~~~g~~l~~--------~~~----~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 522 (1075)
|++++..+.. ... ..|.|.....+| |.|+|.|.|..|.....
T Consensus 166 W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~ 219 (228)
T 3bae_H 166 WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVD 219 (228)
T ss_dssp EGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred EeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEE
Confidence 9999876421 122 246777777655 99999999998866443
No 342
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.62 E-value=1.9e-15 Score=159.28 Aligned_cols=166 Identities=16% Similarity=0.208 Sum_probs=112.1
Q ss_pred cceeeeecCCeEEEEEEEecCC--CCeEEEEECC--EEee-----------------cCCcEEEEEee-CcEEEEEEccc
Q psy16863 755 LKSCQATVNEEFKFTVQVSISP--EPKVSWFRDD--QQVV-----------------ESDNVKILKET-LGVCHLKIHAL 812 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~~i~-----------------~~~~~~~~~~~-~~~~~L~I~~~ 812 (1075)
+....+.+|++++|.|.+.+.| .+.+.|||+. ..+. ...|+.+..+. .+...|.|.++
T Consensus 13 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 92 (261)
T 2xqy_G 13 PGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSL 92 (261)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCC
Confidence 4456789999999999999887 6899999963 2211 13466665432 35678999999
Q ss_pred cCCCCeEEEEEEEeCCceE-E--EEEEEEEEecCCCCCCeeee-ecceeecCCCeEEEEEEEEcc-CCC-eeEEEECCEE
Q psy16863 813 EVADQAEWKCIATNDFGQS-I--TSCFLKLNVPKHYKKPKFLE-ELKAVLSEGGAVNLECKVIGV-PQP-TLKWFKDGRE 886 (1075)
Q Consensus 813 ~~~D~G~Y~C~A~N~~G~~-~--~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~~~L~C~v~g~-p~p-~v~W~k~g~~ 886 (1075)
+.+|+|.|.|.|.|..+.. . ....|.|...+ ..+|.+.. .....+.+|+.++|.|.+.|. |.| .|+|+|||..
T Consensus 93 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~-~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~ 171 (261)
T 2xqy_G 93 TSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAK-TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS 171 (261)
T ss_dssp CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC-CBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCC
T ss_pred CcccCeEEEEEEecCCCcceEECCCEEEEEccCC-CCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCCc
Confidence 9999999999999975421 1 23567776422 12344322 222235679999999999985 776 9999999976
Q ss_pred cCC---C-----Ce----eEEEECCCCceeeEEEEEEEEeCCeeEEEE
Q psy16863 887 LKA---G-----DI----HKIISGEDGTCCLGIYTCEAHNCMGTTSSS 922 (1075)
Q Consensus 887 l~~---~-----~~----~~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~ 922 (1075)
+.. . .. ..|.+......| |.|+|.|.|........
T Consensus 172 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~ 218 (261)
T 2xqy_G 172 SGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVD 218 (261)
T ss_dssp TTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred CceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCccEE
Confidence 531 0 11 134444444446 99999999987765433
No 343
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.62 E-value=3.2e-15 Score=131.53 Aligned_cols=95 Identities=25% Similarity=0.419 Sum_probs=87.2
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+.+..+..|+.+.|.|.+.|.|.|.+.|+|+|..+..+.++.+.....+...|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 58889888899999999999999999999999999999999999888887766667788999999999999999999999
Q ss_pred CCceEEEEEEEEEEe
Q psy16863 827 DFGQSITSCFLKLNV 841 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~ 841 (1075)
..|...+++.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999999988888864
No 344
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.62 E-value=1.1e-14 Score=151.05 Aligned_cols=172 Identities=16% Similarity=0.207 Sum_probs=116.5
Q ss_pred ecCceeeccCCeEEEEEEEecCC--CcEEEEEECC--Ee---c---C----------CCCcEEEEEc--CCEEEEEEccc
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSPT--EIKIHWYRND--RK---L---E----------ENKIYRTQHD--GNFYFIDLSSV 412 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~g--~~---l---~----------~~~~~~~~~~--g~~~~L~I~~v 412 (1075)
.+..+.+.+|++++|.|.+.+.+ .+.+.|||.. .. + . ...|+.+..+ +....|.|.++
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (232)
T 1dn0_B 6 QWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSV 85 (232)
T ss_dssp EECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCC
Confidence 34567899999999999998764 6789999853 21 1 0 1356666543 45678999999
Q ss_pred CCCCceeEEEEEEeCC--Cc----eeeEEEEEeecCCCCCCCeee-eecceEEecC-CeEEEEEEEECC-CCC-eEEEEe
Q psy16863 413 SLFDSGRWTCLAENAV--GR----SHCSCELSVLVPKAYKAPFFT-KELEAILTEQ-GTVSLECKVMGI-PTP-QLIWYK 482 (1075)
Q Consensus 413 ~~~d~G~Y~C~a~n~~--g~----~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g-~~v~l~C~~~g~-p~~-~v~W~~ 482 (1075)
+.+|+|.|.|.+.+.. +. ......|.|...+. .+|.+. ..+...+..| +.++|.|.+.|. |.+ .|+|++
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~-~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~ 164 (232)
T 1dn0_B 86 TAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSA-SAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKY 164 (232)
T ss_dssp CGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCC-BCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEE
T ss_pred CcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCC-CCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEc
Confidence 9999999999998422 11 12345777776322 234433 2223334577 899999999985 776 999999
Q ss_pred -CCEeccC---------CCEE----EEEeCCCCC--CCcEEEEEEEEecceeeEEEEEEEE
Q psy16863 483 -DNKKIKA---------GDIF----ALTANPKDP--SSLGTYTCEAVNCMGAAFSTSRVIA 527 (1075)
Q Consensus 483 -~g~~l~~---------~~~~----~l~i~~~~~--~d~G~Y~C~a~n~~g~~~~~~~v~v 527 (1075)
||+.+.. +..+ .|.|..... .|.|.|+|.|.|..+.......+.+
T Consensus 165 ~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~ 225 (232)
T 1dn0_B 165 KNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPV 225 (232)
T ss_dssp TTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC
T ss_pred CCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCC
Confidence 9987643 1222 467777776 7899999999999987766555443
No 345
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.62 E-value=3.6e-16 Score=162.48 Aligned_cols=170 Identities=17% Similarity=0.145 Sum_probs=106.1
Q ss_pred CCeEEeccceee-eecCCeEEEEEEEecC---CCC-eEEEEECCEEeecCCcE-EEEEee---CcEEEEEEccccCCCCe
Q psy16863 748 APKFIEGLKSCQ-ATVNEEFKFTVQVSIS---PEP-KVSWFRDDQQVVESDNV-KILKET---LGVCHLKIHALEVADQA 818 (1075)
Q Consensus 748 ~p~~~~~~~~~~-~~~g~~~~l~C~v~g~---p~p-~v~W~k~g~~i~~~~~~-~~~~~~---~~~~~L~I~~~~~~D~G 818 (1075)
|..++.++.... +.+|++++|.|.+.|. |.+ .|+|+|++..+...... ...... .....|.|.+++.+|+|
T Consensus 16 P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g 95 (239)
T 1i1c_A 16 SSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGK 95 (239)
T ss_dssp -CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCC
Confidence 444445444444 7799999999999987 776 99999998766432100 000000 02357999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEEecCCCCCCeeeeecce-eecCCCeEEEEEEEEcc-CC-CeeEEEECCEEcCCCCeeEE
Q psy16863 819 EWKCIATNDFGQSITSCFLKLNVPKHYKKPKFLEELKA-VLSEGGAVNLECKVIGV-PQ-PTLKWFKDGRELKAGDIHKI 895 (1075)
Q Consensus 819 ~Y~C~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~~~~~-~~~~g~~~~L~C~v~g~-p~-p~v~W~k~g~~l~~~~~~~i 895 (1075)
.|+|.|.|..|.......+.+ ......+|.+...... ....|+.++|.|.+.|. |. +.|+|+|||.++.......+
T Consensus 96 ~Y~C~~~~~~~~~~~~~~v~~-~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~ 174 (239)
T 1i1c_A 96 TFKCKVNSGAFPAPIEKSISK-PEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPP 174 (239)
T ss_dssp CEEEEEECSSSSSCEEEEECC-CSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCC
T ss_pred eEEEEEecccCCCCcEEEEec-CCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCc
Confidence 999999999886422222211 1122234544322211 12357899999999995 44 47999999998854211111
Q ss_pred EECCCCc--------------eeeEEEEEEEEeCCee
Q psy16863 896 ISGEDGT--------------CCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 896 ~~~~~~~--------------~d~G~Y~C~a~N~~G~ 918 (1075)
....++. .|.|.|+|.|.|..-.
T Consensus 175 ~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 175 TMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp EECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred eECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 1122211 2479999999997643
No 346
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.62 E-value=9e-16 Score=156.23 Aligned_cols=165 Identities=13% Similarity=0.212 Sum_probs=106.8
Q ss_pred eeeecCcee-eccCCeEEEEEEEecCC----CcEEEEEECCEecCCCCcE-EEEEcCC----EEEEEEcccCCCCceeEE
Q psy16863 352 FIRRLHDIA-VKVGTRARLLVEIRSPT----EIKIHWYRNDRKLEENKIY-RTQHDGN----FYFIDLSSVSLFDSGRWT 421 (1075)
Q Consensus 352 ~~~~~~~~~-v~~G~~v~l~C~~~g~p----~~~v~W~k~g~~l~~~~~~-~~~~~g~----~~~L~I~~v~~~d~G~Y~ 421 (1075)
++..+.... +.+|++++|.|.+.|.+ .+.|+|+|++..+...... .....+. ...|.|.+++.+|+|.|+
T Consensus 5 ~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 84 (207)
T 2vol_A 5 FIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFK 84 (207)
T ss_dssp EEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEE
T ss_pred EEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEE
Confidence 344444444 88999999999998763 3599999999876532100 0011111 236999999999999999
Q ss_pred EEEEeCCCceeeEEEEEeecCCCCCCCeeeeecce-EEecCCeEEEEEEEECC-CCC-eEEEEeCCEeccCCC-------
Q psy16863 422 CLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEA-ILTEQGTVSLECKVMGI-PTP-QLIWYKDNKKIKAGD------- 491 (1075)
Q Consensus 422 C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~-~~~~g~~v~l~C~~~g~-p~~-~v~W~~~g~~l~~~~------- 491 (1075)
|.|.|..|.......+.+.. ....+|.+...... ...+|+.+.|.|.+.|. |++ .|+|+|||+++....
T Consensus 85 C~a~~~~~~~~~~~~v~~~~-~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~ 163 (207)
T 2vol_A 85 CRVNSAAFPAPIEKTISKTK-GRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMD 163 (207)
T ss_dssp EEEECTTCSSCEEEEECCCC-CCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEEC
T ss_pred EEEEccCCCCceEEEeccCC-CCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceEC
Confidence 99999988643223332210 11223444322211 12358999999999984 553 999999999875321
Q ss_pred ---EE----EEEeCCCCCCCcEEEEEEEEecce
Q psy16863 492 ---IF----ALTANPKDPSSLGTYTCEAVNCMG 517 (1075)
Q Consensus 492 ---~~----~l~i~~~~~~d~G~Y~C~a~n~~g 517 (1075)
.+ .|.+...+..|.|.|+|.|.|...
T Consensus 164 ~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 164 TDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp TTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred CCCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 11 244444445678999999999754
No 347
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.62 E-value=6.9e-16 Score=158.45 Aligned_cols=169 Identities=13% Similarity=0.215 Sum_probs=108.7
Q ss_pred CCCeeeeecCcee--eccCCeEEEEEEEecC---C-CcEEEEEECCEecCCCCcEEE-EEcCC----EEEEEEcccCCCC
Q psy16863 348 DAPAFIRRLHDIA--VKVGTRARLLVEIRSP---T-EIKIHWYRNDRKLEENKIYRT-QHDGN----FYFIDLSSVSLFD 416 (1075)
Q Consensus 348 ~~p~~~~~~~~~~--v~~G~~v~l~C~~~g~---p-~~~v~W~k~g~~l~~~~~~~~-~~~g~----~~~L~I~~v~~~d 416 (1075)
.+|.+...+.... +.+|++++|.|.+.|. | .+.|+|+|+|..+........ ...+. ...|.|.+++.+|
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 3555544444444 8899999999999876 3 379999999988754321111 11111 2469999999999
Q ss_pred ceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeec-ceEEecCCeEEEEEEEEC-CCCC-eEEEEeCCEeccCC---
Q psy16863 417 SGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKEL-EAILTEQGTVSLECKVMG-IPTP-QLIWYKDNKKIKAG--- 490 (1075)
Q Consensus 417 ~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~-~~~~~~g~~v~l~C~~~g-~p~~-~v~W~~~g~~l~~~--- 490 (1075)
+|.|+|.|.|..+.......+.. ......+|.+.... .....+|+.+.|.|.+.| +|.+ .|+|+|||.++...
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~-~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~ 166 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISK-IKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDT 166 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECC-CCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEEC
T ss_pred CCeEEEEEECCcCCCcceEEEee-cCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceec
Confidence 99999999998775422222211 01112234443222 112235899999999998 6766 99999999987421
Q ss_pred -------CEE----EEEeCCCCCCCcEEEEEEEEecce
Q psy16863 491 -------DIF----ALTANPKDPSSLGTYTCEAVNCMG 517 (1075)
Q Consensus 491 -------~~~----~l~i~~~~~~d~G~Y~C~a~n~~g 517 (1075)
..+ .|.+...+..|.|.|+|.|.|...
T Consensus 167 ~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 167 APVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGL 204 (218)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTS
T ss_pred ccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCC
Confidence 111 233433334458999999999764
No 348
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.62 E-value=1e-14 Score=150.28 Aligned_cols=163 Identities=20% Similarity=0.333 Sum_probs=116.4
Q ss_pred ecCceeeccCCeEEEEEEEecCC--CcEEEEEECC--Eec------C-------------CCCcEEEEEc--CCEEEEEE
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSPT--EIKIHWYRND--RKL------E-------------ENKIYRTQHD--GNFYFIDL 409 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~g--~~l------~-------------~~~~~~~~~~--g~~~~L~I 409 (1075)
.+..+.+.+|++++|.|.+.+.+ .+.+.|||.. ..+ . ...|+.+..+ .....|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 85 (221)
T 3m8o_H 6 ESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQM 85 (221)
T ss_dssp EESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEE
Confidence 34567799999999999998743 6799999842 111 0 1246666543 45678999
Q ss_pred cccCCCCceeEEEEEEeCC--CceeeEEEEEeecCCCCCCCeee-eecceEEecCCeEEEEEEEEC-CCC-C-eEEEEeC
Q psy16863 410 SSVSLFDSGRWTCLAENAV--GRSHCSCELSVLVPKAYKAPFFT-KELEAILTEQGTVSLECKVMG-IPT-P-QLIWYKD 483 (1075)
Q Consensus 410 ~~v~~~d~G~Y~C~a~n~~--g~~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~v~l~C~~~g-~p~-~-~v~W~~~ 483 (1075)
.+++.+|+|.|.|.+.|.. ........|.|...+. .+|.+. ..+... .+|+.++|.|.+.+ .|. + .+.|+++
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~-~~p~v~~~~~~~~-~~g~~v~L~C~~~~~~P~~~~~v~W~~~ 163 (221)
T 3m8o_H 86 NSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASP-TSPKVFPLSLCST-QPDGNVVIACLVQGFFPQEPLSVTWSES 163 (221)
T ss_dssp CSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCC-BCCEEEEEECCSC-CCTTEEEEEEEEEEEBSSCSEEEEESCC
T ss_pred CCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCC-CCCeEEEecCccc-ccCCCEEEEEEEEeeECCCCEEEEEEEC
Confidence 9999999999999999874 2223345677764322 334443 222223 68999999999998 776 4 9999999
Q ss_pred CEec----------cCCCEE----EEEeCCCCCCCcEEEEEEEEecceee
Q psy16863 484 NKKI----------KAGDIF----ALTANPKDPSSLGTYTCEAVNCMGAA 519 (1075)
Q Consensus 484 g~~l----------~~~~~~----~l~i~~~~~~d~G~Y~C~a~n~~g~~ 519 (1075)
|+.+ ..+..+ .|.|......|+|.|+|.|.|..+..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 164 GQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp STTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred CEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 9876 233333 37888888889999999999987654
No 349
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.62 E-value=4.1e-15 Score=152.56 Aligned_cols=190 Identities=13% Similarity=0.091 Sum_probs=117.4
Q ss_pred ccccceeeccceeEEEEEecCC----CceEEEEe-cCCCeeeE-EecCCCcc----ccCCCeEEEeeCCeEEEEEcccCC
Q psy16863 248 RLHDIAVKVGTRARLLVEIRSP----TEIKCQFD-LNNTIPFS-FRAQGDHP----IFGNRFRAINRDGRTELNIRRVRR 317 (1075)
Q Consensus 248 ~~~~~~v~~g~~~~l~c~~~~~----~~~~c~~~-~~~~~~~~-w~~~~~~~----~~~~~~~~~~~~~~~~L~I~~~~~ 317 (1075)
.+.++.+.+|+.++|.|.+.+. ..+.|.-. .+....+. +...++.. ....++.+...++..+|+|.+++.
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 5 ESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTT 84 (215)
T ss_dssp EECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCG
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCc
Confidence 3456778999999999998642 22222111 11111211 11122110 124677777777788999999999
Q ss_pred CCCEEEEEEEEeCCee----EEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCC--CcEEEEEECCEecC
Q psy16863 318 DDGGRYSVTASNESGY----STAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPT--EIKIHWYRNDRKLE 391 (1075)
Q Consensus 318 ~d~G~Y~C~a~n~~g~----~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~g~~l~ 391 (1075)
+|+|.|.|.+.|..+. ....+.|.|......+|.+...+....+.+|+.++|.|.+.+.+ .+.+.|+|+|..+.
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~ 164 (215)
T 3nl4_H 85 EDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNG 164 (215)
T ss_dssp GGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred ccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECC
Confidence 9999999999997542 33445677764445577776555555677899999999998743 45788999997653
Q ss_pred CCCcE-EEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEE
Q psy16863 392 ENKIY-RTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELS 438 (1075)
Q Consensus 392 ~~~~~-~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~ 438 (1075)
..... ....++.........+...| |.|+|.|.|..|.......+.
T Consensus 165 ~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 165 VRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVA 211 (215)
T ss_dssp EEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECC
T ss_pred eEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecC
Confidence 22111 12224444332224456667 999999999988766554443
No 350
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.61 E-value=4.7e-16 Score=161.16 Aligned_cols=168 Identities=13% Similarity=0.142 Sum_probs=107.7
Q ss_pred CCeE-EeccceeeeecCCeEEEEEEEecC-CC-C-eEEEEECCEEe-ecCCcEEEEEeeCc----EEEEEEccccCCCCe
Q psy16863 748 APKF-IEGLKSCQATVNEEFKFTVQVSIS-PE-P-KVSWFRDDQQV-VESDNVKILKETLG----VCHLKIHALEVADQA 818 (1075)
Q Consensus 748 ~p~~-~~~~~~~~~~~g~~~~l~C~v~g~-p~-p-~v~W~k~g~~i-~~~~~~~~~~~~~~----~~~L~I~~~~~~D~G 818 (1075)
+|.+ +..+....+..|+.++|.|.+.|. |. | .|+|+|+|+.+ ........ ...++ ...|.|.+++.+|+|
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~-~~~~g~~~~~s~L~I~~~~~~D~g 90 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQ-EHFNGTYSASSAVPVSTQDWLSGE 90 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEE-ECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccce-ECCCCcEEEEEEEEecchhccCCC
Confidence 4443 455566667899999999999984 74 5 99999999877 32222111 11112 347999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEEecC-CCCCCeeee-ecceeecCCCeEEEEEEEEcc-C-CCeeEEEECCEEcCCCCeeE
Q psy16863 819 EWKCIATNDFGQSITSCFLKLNVPK-HYKKPKFLE-ELKAVLSEGGAVNLECKVIGV-P-QPTLKWFKDGRELKAGDIHK 894 (1075)
Q Consensus 819 ~Y~C~A~N~~G~~~~s~~l~V~~~~-~~~~p~~~~-~~~~~~~~g~~~~L~C~v~g~-p-~p~v~W~k~g~~l~~~~~~~ 894 (1075)
.|+|.|.|..+.. ...+.|.... ...+|.+.. ........++.++|.|.+.|. | .+.|+|+|||.+|..+....
T Consensus 91 ~Y~C~~~~~~~~~--~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~ 168 (231)
T 2w59_A 91 RFTCTVQHEELPL--PLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVT 168 (231)
T ss_dssp CEEEEEECTTCSS--CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEE
T ss_pred EEEEEEEcCCCCC--ceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEECCCccccc
Confidence 9999999988753 3334443221 112343321 111111235679999999996 4 37899999999986542110
Q ss_pred -------------------------EEECCCCceeeEEEEEEEEeCCee
Q psy16863 895 -------------------------IISGEDGTCCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 895 -------------------------i~~~~~~~~d~G~Y~C~a~N~~G~ 918 (1075)
|.+......|.|.|+|.|.|....
T Consensus 169 ~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 169 TAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp CCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred CccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 111111123479999999998754
No 351
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.61 E-value=8.2e-16 Score=158.66 Aligned_cols=181 Identities=14% Similarity=0.157 Sum_probs=122.2
Q ss_pred cccceeeccceeEEEEEecCCCceEEEEecCC--CeeeEEecCCCcccc-------------CCCeEEEe-----eCCeE
Q psy16863 249 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNN--TIPFSFRAQGDHPIF-------------GNRFRAIN-----RDGRT 308 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~--~~~~~w~~~~~~~~~-------------~~~~~~~~-----~~~~~ 308 (1075)
+.++.+.+|+.++|.|.+..... +. ...+.|++++..... ..++.+.. ..+..
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~-------~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 78 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNM-------EVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDA 78 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSS-------SCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCC
T ss_pred CCcEEEEeCCCEEEEeeeccCCC-------CCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCc
Confidence 34566789999999998843210 01 123667666432110 34444443 22455
Q ss_pred EEEEcccCCCCCEEEEEEEEeCC-eeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeE-EEEEEEe-cCCCcEEEEEE
Q psy16863 309 ELNIRRVRRDDGGRYSVTASNES-GYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRA-RLLVEIR-SPTEIKIHWYR 385 (1075)
Q Consensus 309 ~L~I~~~~~~d~G~Y~C~a~n~~-g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v-~l~C~~~-g~p~~~v~W~k 385 (1075)
+|.|.+++.+|+|.|+|.+.|.. |..+..+.|.|.. +|.+...+.... .+|+.+ .|.|.+. +.|.+.|+|+|
T Consensus 79 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~----~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k 153 (221)
T 3eow_R 79 SLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLA----KPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHS 153 (221)
T ss_dssp EEECCCSSCCCCSCBEEEEEESSSCSCEEECCCCCCC----CCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEEC
T ss_pred eEEEccCChHHCeEEEEEEEeCCCCceEEEEEEEEEE----CCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEe
Confidence 89999999999999999999966 6677777777764 677654433333 678888 4999987 78889999999
Q ss_pred CCEecCCCCcEEEEEcC---CEEEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCC
Q psy16863 386 NDRKLEENKIYRTQHDG---NFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPK 443 (1075)
Q Consensus 386 ~g~~l~~~~~~~~~~~g---~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~ 443 (1075)
++.............++ ....|.|.++..+|.|.|+|.|.|.++....+ +.|...|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~--~~v~~~~ 212 (221)
T 3eow_R 154 DLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQL--LTVSLTV 212 (221)
T ss_dssp SSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEE--EEECCCC
T ss_pred CCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeE--EEEEEEE
Confidence 86543322111111222 23579999999999999999999998876544 5555444
No 352
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.61 E-value=4.8e-15 Score=134.28 Aligned_cols=100 Identities=23% Similarity=0.368 Sum_probs=90.2
Q ss_pred CCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeec-CCcEEEEEeeCcEEEEEEccccCCCCeEEEEEE
Q psy16863 746 NKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVE-SDNVKILKETLGVCHLKIHALEVADQAEWKCIA 824 (1075)
Q Consensus 746 ~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A 824 (1075)
..+|.|+..+.+..+.+|+++.|.|.+.|.|.|.+.|+|+|..+.. ..++.+.....+.+.|.|.+++.+|+|.|+|.|
T Consensus 13 ~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (116)
T 2kkq_A 13 KRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSA 92 (116)
T ss_dssp CBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEE
T ss_pred CCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEE
Confidence 4689999999999999999999999999999999999999999874 567887766666779999999999999999999
Q ss_pred EeCCceEEEEEEEEEEecCCC
Q psy16863 825 TNDFGQSITSCFLKLNVPKHY 845 (1075)
Q Consensus 825 ~N~~G~~~~s~~l~V~~~~~~ 845 (1075)
.|..|....++.|.|..++..
T Consensus 93 ~N~~G~~~~~~~l~V~~~p~~ 113 (116)
T 2kkq_A 93 VNEAGVTTCNTRLDVTARPNQ 113 (116)
T ss_dssp EETTEEEEEEEEEEEECCSCC
T ss_pred EcCCCeEEEEEEEEEeCCCCC
Confidence 999999999999999877644
No 353
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.61 E-value=2.2e-15 Score=158.09 Aligned_cols=164 Identities=15% Similarity=0.241 Sum_probs=99.3
Q ss_pred eeeeecCCeEEEEEEEecCC--CCeEEEEECC--EEee-----------------cCCcEEEEEee-CcEEEEEEccccC
Q psy16863 757 SCQATVNEEFKFTVQVSISP--EPKVSWFRDD--QQVV-----------------ESDNVKILKET-LGVCHLKIHALEV 814 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~~i~-----------------~~~~~~~~~~~-~~~~~L~I~~~~~ 814 (1075)
...+.+|++++|.|.+.+.| .+.+.|||.. ..+. ...|+.+..+. .+...|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (257)
T 3bn9_D 9 GGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRA 88 (257)
T ss_dssp CEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCG
T ss_pred CEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCCh
Confidence 45688999999999999876 6789999853 2110 13466665432 3567999999999
Q ss_pred CCCeEEEEEEEeCCce---------E--E--EEEEEEEEecCCCCCCeee-eecceeecCCCeEEEEEEEEcc-CCC-ee
Q psy16863 815 ADQAEWKCIATNDFGQ---------S--I--TSCFLKLNVPKHYKKPKFL-EELKAVLSEGGAVNLECKVIGV-PQP-TL 878 (1075)
Q Consensus 815 ~D~G~Y~C~A~N~~G~---------~--~--~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~~~L~C~v~g~-p~p-~v 878 (1075)
+|+|.|.|.+.|..|. . . ....|.|...+ ..+|.+. ......+.+|+.++|.|.+.|. |.| .|
T Consensus 89 ~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~-~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi~v 167 (257)
T 3bn9_D 89 EDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSAS-TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 167 (257)
T ss_dssp GGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSC-CBCCEECCCCC-----------CCCEEEEEBSSCCEE
T ss_pred hhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCC-CcCCcEEEecCcccccCCCcEEEEEEEeeEECCCcEE
Confidence 9999999999998651 1 1 23467776421 1234332 1222234578999999999986 777 99
Q ss_pred EEEECCEEcC---------CCCeeE----EEECCCCceeeEEEEEEEEeCCeeEEEE
Q psy16863 879 KWFKDGRELK---------AGDIHK----IISGEDGTCCLGIYTCEAHNCMGTTSSS 922 (1075)
Q Consensus 879 ~W~k~g~~l~---------~~~~~~----i~~~~~~~~d~G~Y~C~a~N~~G~~~~~ 922 (1075)
+|+|||..+. .+..+. |.+......| |.|+|.|.|..+.....
T Consensus 168 ~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~~~ 223 (257)
T 3bn9_D 168 SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 223 (257)
T ss_dssp EETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTEEEE
T ss_pred EEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcCEE
Confidence 9999997642 122222 2222222346 99999999977654433
No 354
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.60 E-value=8.7e-15 Score=151.31 Aligned_cols=159 Identities=17% Similarity=0.136 Sum_probs=111.5
Q ss_pred EEecCCeEEEEEEEECCCCC---eEEEEeCCEecc--------------------------------CCCEEEEEeCCCC
Q psy16863 457 ILTEQGTVSLECKVMGIPTP---QLIWYKDNKKIK--------------------------------AGDIFALTANPKD 501 (1075)
Q Consensus 457 ~~~~g~~v~l~C~~~g~p~~---~v~W~~~g~~l~--------------------------------~~~~~~l~i~~~~ 501 (1075)
.+..|++++|.|.+.+.|.+ .|+|+|++..+. ......|.|.++.
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~ 91 (225)
T 4fmk_A 12 RGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGLR 91 (225)
T ss_dssp EEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSCC
T ss_pred EEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccCC
Confidence 36789999999999987776 489999875431 0122469999999
Q ss_pred CCCcEEEEEEEEecceeeEEEEE-EEEeccccccCCCCCCcCCCCCCCCCCeeeeeccceEeecCCeEEEEEEEecCCCC
Q psy16863 502 PSSLGTYTCEAVNCMGAAFSTSR-VIARGQQSFLDNDDVPFNSLMPPGPAPIFIKEVENVKAKIGTSAILECQVLVPPWP 580 (1075)
Q Consensus 502 ~~d~G~Y~C~a~n~~g~~~~~~~-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~L~C~~~~~p~p 580 (1075)
.+|+|.|+|.|.|..|....... +.+. .++.....+.......++.+.+.|.+.+.+++
T Consensus 92 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~ 151 (225)
T 4fmk_A 92 VEDEGNYTCEFATFPNGTRRGVTWLRVI--------------------AQPENHAEAQEVTIGPQSVAVARCVSTGGRPP 151 (225)
T ss_dssp GGGCEEEEEEEEEETTEEEEEEEEEEEE--------------------BCCEEEEEECCBCCSSSCEEEEEEEEEEEBSC
T ss_pred HHHCcceEEEEEeCCCcceeeeeeeeee--------------------cCCceeecccceeecceeeeeeeeeecCCCCC
Confidence 99999999999998776554443 3332 23334444455556678888888877654444
Q ss_pred ceEEEEeCCeEEecCCcEEEEEcCCc--eEEEEEeeeeecCCceEEEEEECCCCcee
Q psy16863 581 RSIYWYNKEGVVEASDKYHIMADGLG--GYSIEINYLEAVDDGEWKCVATSSSGVKQ 635 (1075)
Q Consensus 581 ~~v~W~~~~~~i~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 635 (1075)
..+.|+++++.+..........++.. ...|.|.++..+|+|.|+|.|.|..|...
T Consensus 152 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~ 208 (225)
T 4fmk_A 152 ARITWISSLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEP 208 (225)
T ss_dssp CEEEEECSSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSC
T ss_pred CEEEEEECCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeE
Confidence 48999998876654332222222211 23699999999999999999999988754
No 355
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.59 E-value=9.6e-15 Score=153.32 Aligned_cols=167 Identities=18% Similarity=0.294 Sum_probs=113.9
Q ss_pred eeeecCceeeccCCeEEEEEEEecCCCcEEEEEECC--Eec--------------CCCCcEEEEE-cCCEEEEEEcccCC
Q psy16863 352 FIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRND--RKL--------------EENKIYRTQH-DGNFYFIDLSSVSL 414 (1075)
Q Consensus 352 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g--~~l--------------~~~~~~~~~~-~g~~~~L~I~~v~~ 414 (1075)
+...+..+.+.+|++++|.|.+.+.+.+.|.|||.+ ..+ ....|+.+.. ......|.|.+++.
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 445567788999999999999999889999999922 110 0123444443 34567899999999
Q ss_pred CCceeEEEEEEeCCC------ceeeEEEEEeecCC-CCCCCeeee-ecce-EEecCCeEEEEEEEECC-CCC-eEEEEeC
Q psy16863 415 FDSGRWTCLAENAVG------RSHCSCELSVLVPK-AYKAPFFTK-ELEA-ILTEQGTVSLECKVMGI-PTP-QLIWYKD 483 (1075)
Q Consensus 415 ~d~G~Y~C~a~n~~g------~~~~s~~l~V~~~~-~~~~p~~~~-~~~~-~~~~g~~v~l~C~~~g~-p~~-~v~W~~~ 483 (1075)
+|+|.|.|.+.|..| .......|.|.... ...+|.+.. .+.. .+.+|+.+.|.|.+.|. |++ .++|+||
T Consensus 84 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~ 163 (245)
T 3nfj_J 84 SDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVN 163 (245)
T ss_dssp GGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEET
T ss_pred hhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEEC
Confidence 999999999999433 22234566776421 122333332 2222 24458999999999984 444 7899999
Q ss_pred CEeccCC----------------CEE----EEEeCCCCCCC-cEEEEEEEEeccee
Q psy16863 484 NKKIKAG----------------DIF----ALTANPKDPSS-LGTYTCEAVNCMGA 518 (1075)
Q Consensus 484 g~~l~~~----------------~~~----~l~i~~~~~~d-~G~Y~C~a~n~~g~ 518 (1075)
|+.+..+ ..+ .|.+......| .|.|+|.|.|....
T Consensus 164 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~ 219 (245)
T 3nfj_J 164 GKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp TEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCC
Confidence 9998542 222 46666666666 67999999997643
No 356
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.58 E-value=1.5e-14 Score=148.24 Aligned_cols=165 Identities=18% Similarity=0.238 Sum_probs=112.8
Q ss_pred cCceeeccCCeEEEEEEEecCC--CcEEEEEECC--EecC----------------CCCcEEEEEc--CCEEEEEEcccC
Q psy16863 356 LHDIAVKVGTRARLLVEIRSPT--EIKIHWYRND--RKLE----------------ENKIYRTQHD--GNFYFIDLSSVS 413 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~g--~~l~----------------~~~~~~~~~~--g~~~~L~I~~v~ 413 (1075)
+..+.+.+|++++|.|.+.+.+ .+.|.|||++ ..+. ...|+.+..+ +....|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 4567899999999999998754 5799999963 2110 1246666543 346789999999
Q ss_pred CCCceeEEEEEEeCCCc---eeeEEEEEeecCCCCCCCeee-eecceEEecCCeEEEEEEEECC-CCC-eEEEEeCCEec
Q psy16863 414 LFDSGRWTCLAENAVGR---SHCSCELSVLVPKAYKAPFFT-KELEAILTEQGTVSLECKVMGI-PTP-QLIWYKDNKKI 487 (1075)
Q Consensus 414 ~~d~G~Y~C~a~n~~g~---~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~v~l~C~~~g~-p~~-~v~W~~~g~~l 487 (1075)
.+|+|.|.|.+.|..+. ....+.|.|...+. .+|.+. ..+...+.+|+.+.|.|.+.|. |.+ .|+|+++|..+
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~-~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 165 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQT-TAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSS 165 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCC-BCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCC
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecCCCC-CCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccC
Confidence 99999999999987432 12345777774221 233333 2322335689999999999986 877 99999998764
Q ss_pred cC--------CCEEEE--EeCCCCCCCcEEEEEEEEecceeeEEE
Q psy16863 488 KA--------GDIFAL--TANPKDPSSLGTYTCEAVNCMGAAFST 522 (1075)
Q Consensus 488 ~~--------~~~~~l--~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 522 (1075)
.. +..+.+ .+......| |.|+|.|.|..|.....
T Consensus 166 ~~~~~~~~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~ 209 (215)
T 1c5d_H 166 DVHTFPAVLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVD 209 (215)
T ss_dssp SCCBCCCEEETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEE
T ss_pred ceEecCcccCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccEE
Confidence 21 133332 122333355 99999999998865433
No 357
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.58 E-value=1.2e-14 Score=128.93 Aligned_cols=95 Identities=21% Similarity=0.413 Sum_probs=86.3
Q ss_pred CCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 746 NKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 746 ~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.++|+|+|..+..+.++.+.. ..+...|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a~ 84 (103)
T 3qp3_A 6 DHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTN-TSGVLTLEILDCHTDDSGTYRAVCT 84 (103)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEE-ETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEE-CCCEEEEEEcCCCcccCEEEEEEEE
Confidence 368899999999999999999999999999999999999999999888887764 3457789999999999999999999
Q ss_pred eCCceEEEEEEEEEEe
Q psy16863 826 NDFGQSITSCFLKLNV 841 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~ 841 (1075)
|..|....++.|.|..
T Consensus 85 N~~G~~~~~~~l~V~~ 100 (103)
T 3qp3_A 85 NYKGEASDYATLDVTG 100 (103)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCcEEEEEEEEEEC
Confidence 9999999999888875
No 358
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.58 E-value=8.7e-15 Score=153.11 Aligned_cols=166 Identities=17% Similarity=0.260 Sum_probs=113.9
Q ss_pred eeeeecCceeeccCCeEEEEEEEecCCCcEEEEEEC--------------CEecC---CCCcEEEEE-cCCEEEEEEccc
Q psy16863 351 AFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRN--------------DRKLE---ENKIYRTQH-DGNFYFIDLSSV 412 (1075)
Q Consensus 351 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~--------------g~~l~---~~~~~~~~~-~g~~~~L~I~~v 412 (1075)
.+...+..+.+.+|++++|.|.+.+ +.+.|.|||. +.... ...++.+.. .+....|.|.++
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 82 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSAL 82 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSC
T ss_pred ccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcC
Confidence 4555667788999999999999865 6789999992 22111 124665554 334568999999
Q ss_pred CCCCceeEEEEEEeCC---CceeeEEEEEeecCC-CCCCCeeee-ecce-EEecCCeEEEEEEEEC-CCCC-eEEEEeCC
Q psy16863 413 SLFDSGRWTCLAENAV---GRSHCSCELSVLVPK-AYKAPFFTK-ELEA-ILTEQGTVSLECKVMG-IPTP-QLIWYKDN 484 (1075)
Q Consensus 413 ~~~d~G~Y~C~a~n~~---g~~~~s~~l~V~~~~-~~~~p~~~~-~~~~-~~~~g~~v~l~C~~~g-~p~~-~v~W~~~g 484 (1075)
+.+|+|.|.|.+.+.. ........|.|.... ...+|.+.. .+.. .+.+|+.+.|.|.+.| .|.+ .++|+|+|
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g 162 (240)
T 3q5y_A 83 ELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNG 162 (240)
T ss_dssp CGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred ChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECC
Confidence 9999999999998432 122334566666421 123343332 2222 2456899999999998 6666 89999999
Q ss_pred EeccCCC------------EE----EEEeCCCCCCC-cEEEEEEEEecce
Q psy16863 485 KKIKAGD------------IF----ALTANPKDPSS-LGTYTCEAVNCMG 517 (1075)
Q Consensus 485 ~~l~~~~------------~~----~l~i~~~~~~d-~G~Y~C~a~n~~g 517 (1075)
+++..+. .+ .|.+......| .|.|+|.|.|...
T Consensus 163 ~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~ 212 (240)
T 3q5y_A 163 KEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGL 212 (240)
T ss_dssp EEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred EECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCC
Confidence 9986432 22 26777776777 6799999999754
No 359
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.58 E-value=1.7e-14 Score=152.08 Aligned_cols=163 Identities=21% Similarity=0.254 Sum_probs=114.0
Q ss_pred ecCceeeccCCeEEEEEEEecCC--CcEEEEEECC--Eec------C-----------CCCcEEEEEc--CCEEEEEEcc
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSPT--EIKIHWYRND--RKL------E-----------ENKIYRTQHD--GNFYFIDLSS 411 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~g--~~l------~-----------~~~~~~~~~~--g~~~~L~I~~ 411 (1075)
.+..+.+.+|++++|.|.+.+.+ .+.|.|||+. ..+ . ...|+.+..+ .....|.|.+
T Consensus 12 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 91 (261)
T 2xqy_G 12 QPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSS 91 (261)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcC
Confidence 34567899999999999998876 6899999973 211 1 1246666543 3556899999
Q ss_pred cCCCCceeEEEEEEeCCCce---eeEEEEEeecCCCCCCCeee-eecceEEecCCeEEEEEEEECC-CCC-eEEEEeCCE
Q psy16863 412 VSLFDSGRWTCLAENAVGRS---HCSCELSVLVPKAYKAPFFT-KELEAILTEQGTVSLECKVMGI-PTP-QLIWYKDNK 485 (1075)
Q Consensus 412 v~~~d~G~Y~C~a~n~~g~~---~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~v~l~C~~~g~-p~~-~v~W~~~g~ 485 (1075)
++.+|+|.|.|.+.|..+.. ...+.|.|...+. .+|.+. ..+...+.+|+.++|.|.+.|. |.+ .|.|++++.
T Consensus 92 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~-~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~ 170 (261)
T 2xqy_G 92 LTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKT-TAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSL 170 (261)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCC-BCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred CCcccCeEEEEEEecCCCcceEECCCEEEEEccCCC-CCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCC
Confidence 99999999999999864311 1335677765322 233333 2322335679999999999984 776 999999998
Q ss_pred eccC---C-----CE----EEEEeCCCCCCCcEEEEEEEEecceee
Q psy16863 486 KIKA---G-----DI----FALTANPKDPSSLGTYTCEAVNCMGAA 519 (1075)
Q Consensus 486 ~l~~---~-----~~----~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 519 (1075)
.+.. . .. ..|.|.....+| |.|+|.|.|.....
T Consensus 171 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~ 215 (261)
T 2xqy_G 171 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASST 215 (261)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred cCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCc
Confidence 6521 0 22 257787777777 99999999976543
No 360
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.58 E-value=9e-15 Score=153.57 Aligned_cols=167 Identities=17% Similarity=0.303 Sum_probs=114.9
Q ss_pred CeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEE--------------CCEecCC----CCcEEEEEc-CCEEEEEEc
Q psy16863 350 PAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYR--------------NDRKLEE----NKIYRTQHD-GNFYFIDLS 410 (1075)
Q Consensus 350 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k--------------~g~~l~~----~~~~~~~~~-g~~~~L~I~ 410 (1075)
+.+...+..+.+.+|++++|.| ..+.+.+.|.||| ++..+.. ..++.+..+ +....|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 4456667788999999999999 6577889999999 3322211 156666543 345689999
Q ss_pred ccCCCCceeEEEEEEeCC----CceeeEEEEEeecCC-CCCCCeee-eecc-eEEecCCeEEEEEEEEC-CCCC-eEEEE
Q psy16863 411 SVSLFDSGRWTCLAENAV----GRSHCSCELSVLVPK-AYKAPFFT-KELE-AILTEQGTVSLECKVMG-IPTP-QLIWY 481 (1075)
Q Consensus 411 ~v~~~d~G~Y~C~a~n~~----g~~~~s~~l~V~~~~-~~~~p~~~-~~~~-~~~~~g~~v~l~C~~~g-~p~~-~v~W~ 481 (1075)
+++.+|+|.|.|.+.+.. +.......|.|.... ...+|.+. ..+. ..+.+|+.++|.|.+.| .|.+ .++|+
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 161 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 161 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEE
Confidence 999999999999999632 223344566776421 11233332 2222 22456899999999998 4545 89999
Q ss_pred eCCEeccCC----------------CEE----EEEeCCCCCCC-cEEEEEEEEecce
Q psy16863 482 KDNKKIKAG----------------DIF----ALTANPKDPSS-LGTYTCEAVNCMG 517 (1075)
Q Consensus 482 ~~g~~l~~~----------------~~~----~l~i~~~~~~d-~G~Y~C~a~n~~g 517 (1075)
|||+.+..+ ..+ .|.+......| .|.|+|.|.|...
T Consensus 162 ~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l 218 (245)
T 4ei6_B 162 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (245)
T ss_dssp ETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCC
Confidence 999988642 222 26666666667 8999999999653
No 361
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.58 E-value=2.1e-14 Score=153.70 Aligned_cols=186 Identities=14% Similarity=0.138 Sum_probs=123.5
Q ss_pred cccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCC---------------Cc----cccCCCeEEEe--eCCe
Q psy16863 249 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQG---------------DH----PIFGNRFRAIN--RDGR 307 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~---------------~~----~~~~~~~~~~~--~~~~ 307 (1075)
+..+.+.+|+.++|.|.+.+.. .+...+.|++.. .. .....++.+.. ..+.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~--------~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 78 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVT--------FSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRT 78 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSC--------CTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTE
T ss_pred CCCEEECCCCcEEEEEEeeccC--------CCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCE
Confidence 5677899999999999987531 012233343311 10 01134677663 3556
Q ss_pred EEEEEcccCCCCCEEEEEEEEeC---------CeeEEEEEEEEEec-C----------CCCCCeeeeecCceeeccCCeE
Q psy16863 308 TELNIRRVRRDDGGRYSVTASNE---------SGYSTAKFELSVES-Q----------VPDAPAFIRRLHDIAVKVGTRA 367 (1075)
Q Consensus 308 ~~L~I~~~~~~d~G~Y~C~a~n~---------~g~~~~~~~l~V~~-~----------~~~~p~~~~~~~~~~v~~G~~v 367 (1075)
.+|+|.+++.+|+|.|.|.+.|. .......+.|.|.. . ...+|.+...+. ..+.+|+++
T Consensus 79 ~sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v 157 (280)
T 3fku_X 79 AYMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTA 157 (280)
T ss_dssp EEEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCE
T ss_pred EEEEECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCE
Confidence 79999999999999999999986 22233345666653 0 012455555555 889999999
Q ss_pred EEEEEEec-CC-CcEEEEEEC--CEecC------------CCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCc-
Q psy16863 368 RLLVEIRS-PT-EIKIHWYRN--DRKLE------------ENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGR- 430 (1075)
Q Consensus 368 ~l~C~~~g-~p-~~~v~W~k~--g~~l~------------~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~- 430 (1075)
+|.|.+.+ .+ .+.+.|||. +..+. ...++.+..++....|.|.+++.+|+|.|.|.+.|..+.
T Consensus 158 ~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~ 237 (280)
T 3fku_X 158 TLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSA 237 (280)
T ss_dssp EEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTE
T ss_pred EEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCc
Confidence 99999977 43 479999983 32221 135677777778888999999999999999999997632
Q ss_pred --eeeEEEEEeecCC
Q psy16863 431 --SHCSCELSVLVPK 443 (1075)
Q Consensus 431 --~~~s~~l~V~~~~ 443 (1075)
......|.|...+
T Consensus 238 ~~~g~~t~l~V~~~~ 252 (280)
T 3fku_X 238 VVFGGGTKLTVLGQP 252 (280)
T ss_dssp EEEBCCCEEEEC---
T ss_pred eEECCCEEEEECCCC
Confidence 1223456665433
No 362
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.58 E-value=9.3e-14 Score=137.30 Aligned_cols=234 Identities=15% Similarity=0.205 Sum_probs=152.6
Q ss_pred ccceEeecCCeEEEEEEEecCCC---CceEEEEeCCeEEecCCcEEEEEcCCceEEEEEeeeeecCCceEEEEEECCCCc
Q psy16863 557 VENVKAKIGTSAILECQVLVPPW---PRSIYWYNKEGVVEASDKYHIMADGLGGYSIEINYLEAVDDGEWKCVATSSSGV 633 (1075)
Q Consensus 557 ~~~~~v~~G~~~~L~C~~~~~p~---p~~v~W~~~~~~i~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 633 (1075)
|....+..|+.++|+|.+.+..+ +.+|+|+|++..+... ...|.|..+...|+|.|+|.+.|..|.
T Consensus 9 P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGa-----------T~tLti~s~t~sdSG~YqCvVTDa~Gc 77 (304)
T 3shs_A 9 SNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN-----------TATLTVADATSENAGSYKVTVQDTDTM 77 (304)
T ss_dssp ESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCC-----------SSEEEESSCCGGGCEEEEEEEEETTTC
T ss_pred CCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCC-----------cceEEeeeccccCCeEEEEEEEECCCC
Confidence 44556778999999999987643 5799999999775421 127889999999999999999998887
Q ss_pred eeeeeEEEEEeCCCCcCCCceeeccceeeecCCeEEEEEEE--ec-CC-----CCeEEEEECCEEcCCCCeEEEe--ecC
Q psy16863 634 KQFSAAYVHVLMPKNYRKPRFVESLKAVMTDDGLVSFECKV--VG-FP-----TPTLQWFKDNEELKPGDVYQLT--GTS 703 (1075)
Q Consensus 634 ~~~~~~~l~v~~p~~~~~p~~~~~~~~~~~~g~~~~l~C~v--~g-~p-----~p~v~W~k~g~~l~~~~~~~~~--~~~ 703 (1075)
...+. .+.|..+..+. ..+..+.......+..+.|.+.+ .| .| ..+|+|+|++..+.....+... ...
T Consensus 78 s~tSs-~VtVT~~a~l~-i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgAq~lT~sS~Tat 155 (304)
T 3shs_A 78 TSVES-EVFLMEEAELI-VNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQDITIQEFTAD 155 (304)
T ss_dssp CEEEC-CCEEECBCCEE-EEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESSSEEEECSCCGG
T ss_pred eeeee-eEEEeccCcee-EEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCccccceeeEEec
Confidence 65332 34444432211 11111111123456688999988 54 44 4699999999988654444443 346
Q ss_pred CCceEEEEEEecCce--EEEEEEEEEEeccccCchhhhhhhccCCCCCeEEeccceeeeecCCeEEEEEEEe--------
Q psy16863 704 SLGSYCCVAKNVMGK--AESSTQLTIEDIRNHLSEEDKLLLLTNNKAPKFIEGLKSCQATVNEEFKFTVQVS-------- 773 (1075)
Q Consensus 704 d~G~Y~C~a~N~~g~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~v~-------- 773 (1075)
++|.|.|.+.|..+. ++.++.+.+..+ +.-..-+.+.++..|+.+.|.-.++
T Consensus 156 eaG~YtV~VTn~~~~c~~s~~~~i~~~~~------------------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (304)
T 3shs_A 156 KNGVYTVKVWGESEDSAASASTKIMLATM------------------NVDQDVVESKTVALGNEISLNYVVSEDIVGDSS 217 (304)
T ss_dssp GCEEEEEEEESSSGGGCEEEEEEEEECEE------------------EEEECCCSEEEEETTSCEEECCEEEEECCSCCT
T ss_pred CCeEEEEEEEcCCCCcccccceEEEEEcc------------------ccchhheEeehhhcCcEEEEEEEEeeccccCCC
Confidence 899999999998773 334455555432 1112234566788899988877654
Q ss_pred cCCCC--eEEEEE--CCEE----eec-----CCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 774 ISPEP--KVSWFR--DDQQ----VVE-----SDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 774 g~p~p--~v~W~k--~g~~----i~~-----~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
|-|.. .+.||. .|+. |.. -..+.+..+ | +|.-..+..+|..+|.|+|.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 3shs_A 218 GMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPD--G--HLFKESATYDDTAKFWCVAK 278 (304)
T ss_dssp TCCEEEEEEEEEEECTTCCSCEEEESSSEECGGGEEECTT--S--CEEESSCCGGGCEEEEEEEE
T ss_pred CCCceEEEEEEEEeecCccCchhhhhhhhhhhccceeCCC--c--ceeecccccccchheeeHHH
Confidence 23432 678975 3431 110 123444322 2 58888899999999999995
No 363
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.58 E-value=6.9e-15 Score=129.68 Aligned_cols=95 Identities=22% Similarity=0.405 Sum_probs=84.3
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.||.|...+....+..|+++.|.|.+.|.|.|.+.|+|+|..+....+..+.....+...|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 47788888888899999999999999999999999999999998776655555566678999999999999999999999
Q ss_pred CCceEEEEEEEEEEe
Q psy16863 827 DFGQSITSCFLKLNV 841 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~ 841 (1075)
..|....++.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (100)
T 2kdg_A 84 RAGEATFTVQLDVLA 98 (100)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEEEe
Confidence 999998888888875
No 364
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.58 E-value=5.4e-15 Score=156.62 Aligned_cols=166 Identities=19% Similarity=0.249 Sum_probs=103.9
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEEC--CEecC-----C--C-----------CcEEE-EEcCCEEEE
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRN--DRKLE-----E--N-----------KIYRT-QHDGNFYFI 407 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~--g~~l~-----~--~-----------~~~~~-~~~g~~~~L 407 (1075)
+|.+...+..+.+.+|++++|.|.+.+.+.+.+.|||. +..+. . . .+... ........|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 35566667788999999999999998888889999992 21110 0 0 11111 112233469
Q ss_pred EEcccCCCCceeEEEEEEeCCC---ceeeEEEEEeecCCCCC------------CCeeeeecc-eEEecCCeEEEEEEEE
Q psy16863 408 DLSSVSLFDSGRWTCLAENAVG---RSHCSCELSVLVPKAYK------------APFFTKELE-AILTEQGTVSLECKVM 471 (1075)
Q Consensus 408 ~I~~v~~~d~G~Y~C~a~n~~g---~~~~s~~l~V~~~~~~~------------~p~~~~~~~-~~~~~g~~v~l~C~~~ 471 (1075)
.|.+++.+|+|.|.|.+.|..+ .......|.|..+.... .|.+...+. ..+.+|++++|.|.+.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 161 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYE 161 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEE
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECC
Confidence 9999999999999999999876 23345667777643211 234444444 3488999999999998
Q ss_pred CC-CCCeEEEEeCC--Eec-----------------------cCCCEEEEEeCCCCCCCcEEEEEEEEe
Q psy16863 472 GI-PTPQLIWYKDN--KKI-----------------------KAGDIFALTANPKDPSSLGTYTCEAVN 514 (1075)
Q Consensus 472 g~-p~~~v~W~~~g--~~l-----------------------~~~~~~~l~i~~~~~~d~G~Y~C~a~n 514 (1075)
+. |.+.+.|+|++ ..+ .......|.|.++..+|+|.|.|.+.+
T Consensus 162 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 162 TSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGE 230 (259)
T ss_dssp CCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEES
T ss_pred CccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeC
Confidence 75 77899999843 111 011234599999999999999999975
No 365
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.57 E-value=1.7e-14 Score=155.29 Aligned_cols=172 Identities=13% Similarity=0.157 Sum_probs=117.5
Q ss_pred cccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCC--c-----------------cccCCCeEEEee--CCe
Q psy16863 249 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGD--H-----------------PIFGNRFRAINR--DGR 307 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~--~-----------------~~~~~~~~~~~~--~~~ 307 (1075)
+..+.+.+|+.++|.|.+.+.+. ....+.|++.+. . .....++.+..+ ++.
T Consensus 29 p~~~~v~~G~~v~L~C~~~~~~~--------~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 100 (291)
T 2gki_A 29 SGPELVKPGASVKMSCKASGYTF--------TSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSST 100 (291)
T ss_dssp CCCEEECTTCCEEEEEEEESSCG--------GGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTE
T ss_pred CCcEEecCCCCEEEEEeccCCcc--------cccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCE
Confidence 44677899999999998864220 012344443210 0 001356665543 456
Q ss_pred EEEEEcccCCCCCEEEEEEEEeCC-e--e--EEEEEEEEEecC------------CCCCCeeeeecCceeeccCCeEEEE
Q psy16863 308 TELNIRRVRRDDGGRYSVTASNES-G--Y--STAKFELSVESQ------------VPDAPAFIRRLHDIAVKVGTRARLL 370 (1075)
Q Consensus 308 ~~L~I~~~~~~d~G~Y~C~a~n~~-g--~--~~~~~~l~V~~~------------~~~~p~~~~~~~~~~v~~G~~v~l~ 370 (1075)
.+|+|.+++.+|+|.|.|.+.|.. | . ....+.|.|... ...++.+...+..+.+.+|++++|.
T Consensus 101 ~sL~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~ 180 (291)
T 2gki_A 101 AYMELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMS 180 (291)
T ss_dssp EEEEECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEE
T ss_pred EEEEECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEE
Confidence 799999999999999999999974 2 1 112346777641 1124455555667889999999999
Q ss_pred EEEecCCCc------EEEEEECC--EecC------------CCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCC
Q psy16863 371 VEIRSPTEI------KIHWYRND--RKLE------------ENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAV 428 (1075)
Q Consensus 371 C~~~g~p~~------~v~W~k~g--~~l~------------~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~ 428 (1075)
|.+.+.+.+ .+.|||++ ..+. ...++.+..++....|+|.+++.+|+|.|+|.|.|..
T Consensus 181 C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 181 CKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYH 258 (291)
T ss_dssp EEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred EEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 999887755 89999963 2111 1456666666777789999999999999999999853
No 366
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.57 E-value=2.2e-14 Score=151.04 Aligned_cols=171 Identities=18% Similarity=0.271 Sum_probs=116.4
Q ss_pred ecCceeeccCCeEEEEEEEecC--CCcEEEEEECC--E---ec--------------CCCCcEEEEEc--CCEEEEEEcc
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSP--TEIKIHWYRND--R---KL--------------EENKIYRTQHD--GNFYFIDLSS 411 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~--p~~~v~W~k~g--~---~l--------------~~~~~~~~~~~--g~~~~L~I~~ 411 (1075)
.+..+.+.+|++++|.|.+.+. +...+.|||.. . .+ ....|+.+..+ .....|+|.+
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (253)
T 3liz_H 6 ESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSS 85 (253)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECS
T ss_pred cCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 3456789999999999999773 36789999842 1 11 01245555543 3567799999
Q ss_pred cCCCCceeEEEEEEeCC----CceeeEEEEEeecCCCCCCCeee-eecceEEecCCeEEEEEEEEC-CCCC-eEEEEeCC
Q psy16863 412 VSLFDSGRWTCLAENAV----GRSHCSCELSVLVPKAYKAPFFT-KELEAILTEQGTVSLECKVMG-IPTP-QLIWYKDN 484 (1075)
Q Consensus 412 v~~~d~G~Y~C~a~n~~----g~~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~v~l~C~~~g-~p~~-~v~W~~~g 484 (1075)
++.+|+|.|.|.+.|.. +.......|.|.... ..+|.+. ......+..|+.+.|.|.+.| .|.+ .+.|+++|
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~ 164 (253)
T 3liz_H 86 LKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAK-TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 164 (253)
T ss_dssp CCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSC-CBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CChhhCEEEEEEEecCCcceeeEECCCEEEEEeccC-CCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCC
Confidence 99999999999998862 222334567776322 2344444 223333567999999999998 7766 89999999
Q ss_pred Eec--------cCCCEE----EEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEE
Q psy16863 485 KKI--------KAGDIF----ALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIA 527 (1075)
Q Consensus 485 ~~l--------~~~~~~----~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v 527 (1075)
..+ .....+ .|.+......| |.|+|.|.|..+.......+.+
T Consensus 165 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~ 218 (253)
T 3liz_H 165 LSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVP 218 (253)
T ss_dssp BCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred eecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecC
Confidence 732 111333 57788888888 9999999999987766655544
No 367
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.57 E-value=1.6e-14 Score=124.34 Aligned_cols=89 Identities=19% Similarity=0.228 Sum_probs=78.6
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|+..+++..+.+|+++.|.|.+.+ |+|.++|+|||.+|..+.++.+..+ .+.+.|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~-g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIED-GKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEE-TTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEE-CCEEEEEECCCChhhCEEEEEEECC
Confidence 6899999999999999999999999986 5689999999999999899887654 4567999999999999999999988
Q ss_pred CCceEEEEEEEEEEe
Q psy16863 827 DFGQSITSCFLKLNV 841 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~ 841 (1075)
. ..++.|.|..
T Consensus 82 ~----~~sa~L~V~~ 92 (93)
T 1waa_A 82 T----KSAANLKVKE 92 (93)
T ss_dssp E----EEEEEEEEEC
T ss_pred C----cEEEEEEEEc
Confidence 4 4678888874
No 368
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.57 E-value=1.6e-14 Score=150.96 Aligned_cols=175 Identities=15% Similarity=0.122 Sum_probs=118.3
Q ss_pred eeeeecCceeeccCCeEEEEEEEecC--CCcEEEEEECC--Ee---c-----------C---CCCcEEEEEcC--CEEEE
Q psy16863 351 AFIRRLHDIAVKVGTRARLLVEIRSP--TEIKIHWYRND--RK---L-----------E---ENKIYRTQHDG--NFYFI 407 (1075)
Q Consensus 351 ~~~~~~~~~~v~~G~~v~l~C~~~g~--p~~~v~W~k~g--~~---l-----------~---~~~~~~~~~~g--~~~~L 407 (1075)
.+...+..+.+.+|++++|.|.+.+. +.+.+.|||++ .. + . ...|+.+..+. ....|
T Consensus 3 ~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 82 (242)
T 1hxm_B 3 HLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTL 82 (242)
T ss_dssp EEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEE
T ss_pred ccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEE
Confidence 34455667889999999999999875 57899999953 21 1 0 23566665433 46789
Q ss_pred EEcccCCCCceeEEEEEEeCCC-c------eeeEEEEEeecCCC----CCCCeeeeecceEEecCCeEEEEEEEECC-CC
Q psy16863 408 DLSSVSLFDSGRWTCLAENAVG-R------SHCSCELSVLVPKA----YKAPFFTKELEAILTEQGTVSLECKVMGI-PT 475 (1075)
Q Consensus 408 ~I~~v~~~d~G~Y~C~a~n~~g-~------~~~s~~l~V~~~~~----~~~p~~~~~~~~~~~~g~~v~l~C~~~g~-p~ 475 (1075)
.|.+++.+|+|.|.|.+.+..+ . ......|.|...+. ...|.+..+....+.+|+.++|.|.+.|. |.
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~ 162 (242)
T 1hxm_B 83 TIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPD 162 (242)
T ss_dssp EECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSC
T ss_pred EECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECC
Confidence 9999999999999999998631 1 11245677775421 01112222222235579999999999986 64
Q ss_pred -CeEEEEeCCE-eccCC---------CE----EEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEE
Q psy16863 476 -PQLIWYKDNK-KIKAG---------DI----FALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIA 527 (1075)
Q Consensus 476 -~~v~W~~~g~-~l~~~---------~~----~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v 527 (1075)
+.|+|++++. .+... .. ..|.|..... + |.|+|.|.|..+.......+.+
T Consensus 163 ~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 163 VIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp CEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred CeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 6999999987 55321 11 2577766654 4 9999999999887654444443
No 369
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.57 E-value=2.5e-15 Score=155.34 Aligned_cols=189 Identities=13% Similarity=0.201 Sum_probs=104.5
Q ss_pred EEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeeeecCcee-eccCCeEEEEEEEecC---C-CcEEEEEECCEecCCCCc
Q psy16863 321 GRYSVTASNESGYSTAKFELSVESQVPDAPAFIRRLHDIA-VKVGTRARLLVEIRSP---T-EIKIHWYRNDRKLEENKI 395 (1075)
Q Consensus 321 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~-v~~G~~v~l~C~~~g~---p-~~~v~W~k~g~~l~~~~~ 395 (1075)
|+|.|...|..+. ......+. .|+.++..+.... +..|+.++|.|.+.|. | .+.|+|+|||.++.....
T Consensus 1 ~~~~~~~~~~~~~--c~~~~~~~----~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~ 74 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CPAPELLG----GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKT 74 (240)
T ss_dssp ----------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEE
T ss_pred CceeeeeeecCCC--CCccccCC----CCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCcee
Confidence 7899999997664 12111111 2444555666666 6679999999999885 3 458999999998854321
Q ss_pred E--EEEEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecc-eEEecCCeEEEEEE
Q psy16863 396 Y--RTQHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELE-AILTEQGTVSLECK 469 (1075)
Q Consensus 396 ~--~~~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~-~~~~~g~~v~l~C~ 469 (1075)
. ....++.. ..|.|.....+|.|.|+|+|.|..+.......+.... ....+|.+..... ....+|+.+.|.|.
T Consensus 75 ~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~-~~~~~P~V~v~~~~~~~~~g~~~~L~C~ 153 (240)
T 4acp_A 75 KPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK-GQPREPQVYTLPPSRDELTKNQVSLTCL 153 (240)
T ss_dssp CCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCC-SCCBCCEEEEECCCGGGGGSSEEEEEEE
T ss_pred ccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccC-CCCCCCEEEEECCChHHhcCCceEEEEE
Confidence 1 11123332 3678887777789999999999877543333332211 1123344433222 12234889999999
Q ss_pred EEC-CCCC-eEEEEeCCEeccCC----------CEE----EEEeCCCCCCCcEEEEEEEEecc
Q psy16863 470 VMG-IPTP-QLIWYKDNKKIKAG----------DIF----ALTANPKDPSSLGTYTCEAVNCM 516 (1075)
Q Consensus 470 ~~g-~p~~-~v~W~~~g~~l~~~----------~~~----~l~i~~~~~~d~G~Y~C~a~n~~ 516 (1075)
+.| +|.+ .++|+|||+++... ..+ .|.+......+.|.|+|.|.|..
T Consensus 154 ~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 154 VKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp EEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred EeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 998 5654 89999999987421 111 34444444456799999999865
No 370
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.57 E-value=3.8e-14 Score=151.77 Aligned_cols=170 Identities=16% Similarity=0.228 Sum_probs=118.5
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECC--Eec-------------C----CCCcEEEEE-cCCEEEEE
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRND--RKL-------------E----ENKIYRTQH-DGNFYFID 408 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g--~~l-------------~----~~~~~~~~~-~g~~~~L~ 408 (1075)
.+.+...+..+.+.+|++++|.|.+.+.+.+.|.|||++ ..+ . ...|+.+.. .+....|.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 455666777889999999999999988888899999964 111 0 134666654 34567899
Q ss_pred EcccCCCCceeEEEEEEeCCC------ceeeEEEEEeecCCC-CCCCeeeee-cc-eEEecCCeEEEEEEEECC-CC-Ce
Q psy16863 409 LSSVSLFDSGRWTCLAENAVG------RSHCSCELSVLVPKA-YKAPFFTKE-LE-AILTEQGTVSLECKVMGI-PT-PQ 477 (1075)
Q Consensus 409 I~~v~~~d~G~Y~C~a~n~~g------~~~~s~~l~V~~~~~-~~~p~~~~~-~~-~~~~~g~~v~l~C~~~g~-p~-~~ 477 (1075)
|.+++.+|+|.|+|.+.|..| .......|.|..... ..+|.+... +. ..+.+|+.+.|.|.+.|. |+ +.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 183 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 183 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcE
Confidence 999999999999999999432 112235677765321 124444322 11 124478999999999986 44 69
Q ss_pred EEEEeCCEeccCC----------------CEE----EEEeCCCCCC-CcEEEEEEEEeccee
Q psy16863 478 LIWYKDNKKIKAG----------------DIF----ALTANPKDPS-SLGTYTCEAVNCMGA 518 (1075)
Q Consensus 478 v~W~~~g~~l~~~----------------~~~----~l~i~~~~~~-d~G~Y~C~a~n~~g~ 518 (1075)
|+|+|||+++..+ ..+ .|.|...... +.|.|+|.|.|....
T Consensus 184 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 184 LSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 245 (279)
T ss_dssp EEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBC
T ss_pred EEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCC
Confidence 9999999987532 112 3667666655 478999999997543
No 371
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.56 E-value=1.7e-14 Score=151.31 Aligned_cols=163 Identities=19% Similarity=0.270 Sum_probs=101.0
Q ss_pred ecCceeeccCCeEEEEEEEecCC--CcEEEEEECC--Eec------C-----------CCCcEEEEEc--CCEEEEEEcc
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSPT--EIKIHWYRND--RKL------E-----------ENKIYRTQHD--GNFYFIDLSS 411 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~g--~~l------~-----------~~~~~~~~~~--g~~~~L~I~~ 411 (1075)
.+..+.+.+|++++|.|.+.+.+ .+.+.|||.+ ..+ . ...|+.+..+ +....|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (257)
T 3bn9_D 6 QSGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSS 85 (257)
T ss_dssp EECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEES
T ss_pred ccCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECC
Confidence 34567899999999999998765 6789999953 111 0 1346666554 4567899999
Q ss_pred cCCCCceeEEEEEEeCCCc-------------eeeEEEEEeecCCCCCCCeee-eecceEEecCCeEEEEEEEECC-CCC
Q psy16863 412 VSLFDSGRWTCLAENAVGR-------------SHCSCELSVLVPKAYKAPFFT-KELEAILTEQGTVSLECKVMGI-PTP 476 (1075)
Q Consensus 412 v~~~d~G~Y~C~a~n~~g~-------------~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~v~l~C~~~g~-p~~ 476 (1075)
++.+|+|.|.|.+.|..|. ......|.|...+. .+|.+. ..+...+.+|+.++|.|.+.|. |.+
T Consensus 86 v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~-~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~p 164 (257)
T 3bn9_D 86 LRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSAST-KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEP 164 (257)
T ss_dssp CCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCC-BCCEECCCCC-----------CCCEEEEEBSSC
T ss_pred CChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCC-cCCcEEEecCcccccCCCcEEEEEEEeeEECCC
Confidence 9999999999999997651 11234677765221 233332 2222235678999999999985 777
Q ss_pred -eEEEEeCCEecc---------CCCEE----EEEeCCCCCCCcEEEEEEEEecceee
Q psy16863 477 -QLIWYKDNKKIK---------AGDIF----ALTANPKDPSSLGTYTCEAVNCMGAA 519 (1075)
Q Consensus 477 -~v~W~~~g~~l~---------~~~~~----~l~i~~~~~~d~G~Y~C~a~n~~g~~ 519 (1075)
.|+|++++..+. .+..+ .|.|......| |.|+|.|.|.....
T Consensus 165 i~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~ 220 (257)
T 3bn9_D 165 VTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 220 (257)
T ss_dssp CEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTE
T ss_pred cEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCc
Confidence 999999998642 12222 35666666667 99999999976544
No 372
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.56 E-value=1.6e-14 Score=150.73 Aligned_cols=163 Identities=16% Similarity=0.254 Sum_probs=108.0
Q ss_pred eccceeeeecCCeEEEEEEEecCCCCeEEEEECC--EE---ee------------cCCcEEEEEeeCcEEEEEEccccCC
Q psy16863 753 EGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDD--QQ---VV------------ESDNVKILKETLGVCHLKIHALEVA 815 (1075)
Q Consensus 753 ~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g--~~---i~------------~~~~~~~~~~~~~~~~L~I~~~~~~ 815 (1075)
..+..+.+.+|+++.|.|.+. .+.+.+.|||++ .. +. ...++.+.....+.+.|.|.+++.+
T Consensus 4 q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~ 82 (238)
T 1bec_A 4 QSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPS 82 (238)
T ss_dssp EECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGG
T ss_pred cCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcc
Confidence 344567799999999999996 568899999963 11 10 1345655433345779999999999
Q ss_pred CCeEEEEEEEeCCc---eE--EEEEEEEEEecCC-CCCCeeee-ecc-eeecCCCeEEEEEEEEcc-CCC-eeEEEECCE
Q psy16863 816 DQAEWKCIATNDFG---QS--ITSCFLKLNVPKH-YKKPKFLE-ELK-AVLSEGGAVNLECKVIGV-PQP-TLKWFKDGR 885 (1075)
Q Consensus 816 D~G~Y~C~A~N~~G---~~--~~s~~l~V~~~~~-~~~p~~~~-~~~-~~~~~g~~~~L~C~v~g~-p~p-~v~W~k~g~ 885 (1075)
|+|.|.|.+.|..+ .. .....|.|..+.. ..+|.+.. ... ..+.+|+.++|.|.+.|. |.| .|+|+|||.
T Consensus 83 D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~ 162 (238)
T 1bec_A 83 QTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGK 162 (238)
T ss_dssp GCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTE
T ss_pred cCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCE
Confidence 99999999999742 11 1234577765321 12444432 222 124579999999999986 655 899999999
Q ss_pred EcCCCCee------------EEEE-CCCCce---e-eEEEEEEEEeCC
Q psy16863 886 ELKAGDIH------------KIIS-GEDGTC---C-LGIYTCEAHNCM 916 (1075)
Q Consensus 886 ~l~~~~~~------------~i~~-~~~~~~---d-~G~Y~C~a~N~~ 916 (1075)
++..+... .+.. ...... | .|.|+|.|.|..
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~ 210 (238)
T 1bec_A 163 EVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHG 210 (238)
T ss_dssp EECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECC
T ss_pred ECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCC
Confidence 98654211 1110 011111 2 578999999974
No 373
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=6.8e-15 Score=128.82 Aligned_cols=92 Identities=14% Similarity=0.200 Sum_probs=82.5
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.||.|...+.+..+.+|+++.|.|.+ .|.|.++|+|||.+|..+.++.+... ...+.|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~-~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQK-GRIHKLVIANALTEDEGDYVFAPDA 82 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEEC-SSEEEEEESSCCGGGCSEEEEEESS
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEe-CCEEEEEECCCChhhCEEEEEEEcC
Confidence 58899999999999999999999999 79999999999999999999988654 3567899999999999999999999
Q ss_pred CCceEEEEEEEEEEecC
Q psy16863 827 DFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~~~ 843 (1075)
. ....++.|.|..||
T Consensus 83 ~--~~~~~a~L~V~~~P 97 (100)
T 2yuz_A 83 Y--NVTLPAKVHVISGP 97 (100)
T ss_dssp S--CCCEEEEEEEECCS
T ss_pred C--CeeEEEEEEEeCCC
Confidence 8 55678899998765
No 374
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.56 E-value=2e-14 Score=126.43 Aligned_cols=95 Identities=25% Similarity=0.430 Sum_probs=83.3
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.||.|...+....+..|+++.|.|.+.|.|.|.+.|+|+|..+..+.+........+.+.|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 47888888888899999999999999999999999999999998776554444455677899999999999999999999
Q ss_pred CCceEEEEEEEEEEe
Q psy16863 827 DFGQSITSCFLKLNV 841 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~ 841 (1075)
..|....++.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 84 EYGARQCEARLEVRG 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEC
Confidence 999998888888763
No 375
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.56 E-value=7.5e-15 Score=156.47 Aligned_cols=167 Identities=15% Similarity=0.225 Sum_probs=113.8
Q ss_pred CeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEE--CCEec------------CC----CCcEEEEEc-CCEEEEEEc
Q psy16863 350 PAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYR--NDRKL------------EE----NKIYRTQHD-GNFYFIDLS 410 (1075)
Q Consensus 350 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k--~g~~l------------~~----~~~~~~~~~-g~~~~L~I~ 410 (1075)
+.+...+..+.+.+|++++|.|.+. .+.+.|.||| .+..+ .. ..|+.+..+ +....|.|.
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~ 105 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQ 105 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEEC
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEEC
Confidence 4455566778899999999999986 5678999999 22211 11 156665542 335679999
Q ss_pred ccCCCCceeEEEEEEeC--CCceeeEEEEEeecCC-CCCCCeeee-ecc-eEEecCCeEEEEEEEECCCCC--eEEEEeC
Q psy16863 411 SVSLFDSGRWTCLAENA--VGRSHCSCELSVLVPK-AYKAPFFTK-ELE-AILTEQGTVSLECKVMGIPTP--QLIWYKD 483 (1075)
Q Consensus 411 ~v~~~d~G~Y~C~a~n~--~g~~~~s~~l~V~~~~-~~~~p~~~~-~~~-~~~~~g~~v~l~C~~~g~p~~--~v~W~~~ 483 (1075)
+++.+|+|.|.|.+.|. .+.......|.|.... ...+|.+.. .+. ..+.+|+.++|.|.+.|.|++ .++|+||
T Consensus 106 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~ 185 (268)
T 3pl6_D 106 RTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVN 185 (268)
T ss_dssp SCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEES
T ss_pred CCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEEC
Confidence 99999999999999984 2333344567776421 122343332 222 224568999999999986554 8999999
Q ss_pred CEeccCC----------------CEE----EEEeCCCCCCC-cEEEEEEEEecce
Q psy16863 484 NKKIKAG----------------DIF----ALTANPKDPSS-LGTYTCEAVNCMG 517 (1075)
Q Consensus 484 g~~l~~~----------------~~~----~l~i~~~~~~d-~G~Y~C~a~n~~g 517 (1075)
|+++..+ ..+ .|.+...+..| +|.|+|.|.|...
T Consensus 186 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l 240 (268)
T 3pl6_D 186 GKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 240 (268)
T ss_dssp SSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred CEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCC
Confidence 9988542 222 34566555566 9999999999754
No 376
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=2.6e-14 Score=129.39 Aligned_cols=96 Identities=16% Similarity=0.208 Sum_probs=86.8
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.||.|+..+.+..+.+|+.+.|.|.+.|.|.|.++|+|+|..+..+.++.+... .+...|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENS-ENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEEC-SSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEc-CCEEEEEECCCChhcCEEEEEEEEE
Confidence 589999888899999999999999999999999999999999988888887643 3467899999999999999999999
Q ss_pred CCceEEEEEEEEEEecC
Q psy16863 827 DFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~~~ 843 (1075)
..|....++.|.|..++
T Consensus 85 ~~g~~~~~~~l~V~~~p 101 (114)
T 2cqv_A 85 KLGSRQAQVNLTVVDKP 101 (114)
T ss_dssp SSCEEECCEEEEEECSC
T ss_pred CCCcEEEEEEEEEECCC
Confidence 99999889999988654
No 377
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.55 E-value=5.3e-15 Score=153.21 Aligned_cols=167 Identities=16% Similarity=0.266 Sum_probs=110.6
Q ss_pred CCee-eeecCceeeccCCeEEEEEEEec-CCC--cEEEEEECCEec-CCCCcEE-EEEcCC---EEEEEEcccCCCCcee
Q psy16863 349 APAF-IRRLHDIAVKVGTRARLLVEIRS-PTE--IKIHWYRNDRKL-EENKIYR-TQHDGN---FYFIDLSSVSLFDSGR 419 (1075)
Q Consensus 349 ~p~~-~~~~~~~~v~~G~~v~l~C~~~g-~p~--~~v~W~k~g~~l-~~~~~~~-~~~~g~---~~~L~I~~v~~~d~G~ 419 (1075)
+|.+ +..+....+.+|+.++|.|.+.| .|. ..|+|+|+|..+ ....... ...+|. ...|.|.++..+|+|.
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~ 91 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGER 91 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCE
Confidence 3443 34556667889999999999988 463 499999999887 4332222 112333 2369999999999999
Q ss_pred EEEEEEeCCCceeeEEEEEeecCC-CCCCCeeee-ecceEEecCCeEEEEEEEECC-CC-CeEEEEeCCEeccCCC----
Q psy16863 420 WTCLAENAVGRSHCSCELSVLVPK-AYKAPFFTK-ELEAILTEQGTVSLECKVMGI-PT-PQLIWYKDNKKIKAGD---- 491 (1075)
Q Consensus 420 Y~C~a~n~~g~~~~s~~l~V~~~~-~~~~p~~~~-~~~~~~~~g~~v~l~C~~~g~-p~-~~v~W~~~g~~l~~~~---- 491 (1075)
|+|.|.|..+... ..+.|.... ...+|.+.. .+......++.+.|.|.+.|. |+ +.|+|+|||+++..+.
T Consensus 92 Y~C~~~~~~~~~~--~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~ 169 (231)
T 2w59_A 92 FTCTVQHEELPLP--LSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTT 169 (231)
T ss_dssp EEEEEECTTCSSC--EEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEEC
T ss_pred EEEEEEcCCCCCc--eEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccC
Confidence 9999999876533 334443321 112333322 111111235679999999985 43 6999999999874321
Q ss_pred -----------------EE----EEEeCCCCCCCcEEEEEEEEecce
Q psy16863 492 -----------------IF----ALTANPKDPSSLGTYTCEAVNCMG 517 (1075)
Q Consensus 492 -----------------~~----~l~i~~~~~~d~G~Y~C~a~n~~g 517 (1075)
.+ .|.|......|.|.|+|.|.|...
T Consensus 170 ~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l 216 (231)
T 2w59_A 170 AVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEAL 216 (231)
T ss_dssp CCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCC
Confidence 11 355555556678999999999764
No 378
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.55 E-value=9.7e-15 Score=148.60 Aligned_cols=155 Identities=14% Similarity=0.241 Sum_probs=96.0
Q ss_pred ccCCeEEEEEEEecCC----CcEEEEEECCEecCCCCc--EEEEEcCCEE---EEEEcccCCCCceeEEEEEEeCCCcee
Q psy16863 362 KVGTRARLLVEIRSPT----EIKIHWYRNDRKLEENKI--YRTQHDGNFY---FIDLSSVSLFDSGRWTCLAENAVGRSH 432 (1075)
Q Consensus 362 ~~G~~v~l~C~~~g~p----~~~v~W~k~g~~l~~~~~--~~~~~~g~~~---~L~I~~v~~~d~G~Y~C~a~n~~g~~~ 432 (1075)
.+|++++|.|.+.|.+ .+.|+|||+|.++..... .....+|... .|.|.....+|+|.|+|.|.|..+...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 7999999999998864 359999999988754321 1112233322 233434444459999999999987653
Q ss_pred eEEEEEeecCCCCCCCeeeee-cceEEecCCeEEEEEEEECC-CC-CeEEEEeCCEeccCC----------CEE----EE
Q psy16863 433 CSCELSVLVPKAYKAPFFTKE-LEAILTEQGTVSLECKVMGI-PT-PQLIWYKDNKKIKAG----------DIF----AL 495 (1075)
Q Consensus 433 ~s~~l~V~~~~~~~~p~~~~~-~~~~~~~g~~v~l~C~~~g~-p~-~~v~W~~~g~~l~~~----------~~~----~l 495 (1075)
.+..+.+. .....+|.+... .......|+.+.|.|.+.|. |+ +.|+|+|||.++... ..+ .|
T Consensus 96 ~~~~v~~~-~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l 174 (207)
T 1l6x_A 96 IEKTISKA-KGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL 174 (207)
T ss_dssp EEEEECCC-CSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEE
T ss_pred eEEEeccC-CCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEE
Confidence 33333210 011223343322 11112246679999999985 54 399999999987531 111 23
Q ss_pred EeCCCCCCCcEEEEEEEEecce
Q psy16863 496 TANPKDPSSLGTYTCEAVNCMG 517 (1075)
Q Consensus 496 ~i~~~~~~d~G~Y~C~a~n~~g 517 (1075)
.+...+..|.|.|+|.|.|...
T Consensus 175 ~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 175 TVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp EEEHHHHHTTCCEEEEEECTTS
T ss_pred EECHHHcCCCCEEEEEEEcCCc
Confidence 3433334568999999999753
No 379
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.54 E-value=1e-13 Score=148.25 Aligned_cols=193 Identities=17% Similarity=0.151 Sum_probs=119.8
Q ss_pred cceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCC--c-----------------eeccCcEEEE--ecCCe
Q psy16863 142 LHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGD--H-----------------PIFGNRFRAI--NRDGR 200 (1075)
Q Consensus 142 ~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~--~-----------------~~~~~~~~~~--~~~~~ 200 (1075)
+.++.+.+|++++|.|.+.+.. .+...+.|++... . ....+|+.+. ...+.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~--------~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 78 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVT--------FSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRT 78 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSC--------CTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTE
T ss_pred CCCEEECCCCcEEEEEEeeccC--------CCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCE
Confidence 5667889999999999987631 1234566665321 0 0112466665 34556
Q ss_pred EEEEEceeccCCCeEEEEEEEcC---------ceeEEEEEEEeeec-c----------CCCCCccccccccceeecccee
Q psy16863 201 TELNIRRVRRDDGGRYSVTASNE---------SGYSTAKFELSVES-Q----------VPDAPAFIRRLHDIAVKVGTRA 260 (1075)
Q Consensus 201 ~~L~I~~~~~~D~G~Y~C~a~n~---------~g~~~~~~~l~V~~-~----------~~~~p~~~~~~~~~~v~~g~~~ 260 (1075)
..|.|.+++.+|+|.|.|.+.|. .........|.|.. . ...++.+...+. ..+.+|+++
T Consensus 79 ~sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v 157 (280)
T 3fku_X 79 AYMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTA 157 (280)
T ss_dssp EEEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCE
T ss_pred EEEEECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCE
Confidence 79999999999999999999986 22223345566653 0 012344555555 889999999
Q ss_pred EEEEEecC-CCceEEEEecCCCeeeEEecC--CCc------------cccCCCeEEEeeCCeEEEEEcccCCCCCEEEEE
Q psy16863 261 RLLVEIRS-PTEIKCQFDLNNTIPFSFRAQ--GDH------------PIFGNRFRAINRDGRTELNIRRVRRDDGGRYSV 325 (1075)
Q Consensus 261 ~l~c~~~~-~~~~~c~~~~~~~~~~~w~~~--~~~------------~~~~~~~~~~~~~~~~~L~I~~~~~~d~G~Y~C 325 (1075)
+|.|.+.. .. ....+.|++. +.. .....++.+...+...+|+|.+++.+|+|.|.|
T Consensus 158 ~L~C~~~~~~~---------~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C 228 (280)
T 3fku_X 158 TLTCTGNSNNV---------GNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYC 228 (280)
T ss_dssp EEEEECCCCCC---------CTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEE
T ss_pred EEEEEecCCCC---------CCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEE
Confidence 99999875 21 0123334331 111 111467777777788899999999999999999
Q ss_pred EEEeCCe---eEEEEEEEEEecCCCCCCee
Q psy16863 326 TASNESG---YSTAKFELSVESQVPDAPAF 352 (1075)
Q Consensus 326 ~a~n~~g---~~~~~~~l~V~~~~~~~p~~ 352 (1075)
.+.|..+ .....+.|.|......+|.+
T Consensus 229 ~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v 258 (280)
T 3fku_X 229 STWDSSLSAVVFGGGTKLTVLGQPKAAPSA 258 (280)
T ss_dssp EEEETTTTEEEEBCCCEEEEC---------
T ss_pred EEecCCCCceEECCCEEEEECCCCCCCCcE
Confidence 9998651 12334566665433334443
No 380
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.54 E-value=1.3e-14 Score=173.73 Aligned_cols=155 Identities=17% Similarity=0.321 Sum_probs=112.3
Q ss_pred eeeeecCCeEEEEEEE-ecCCCCeEEEEECCEEeec------------CCcEEEEEeeCcEEEEEEccccCCCCeEEEEE
Q psy16863 757 SCQATVNEEFKFTVQV-SISPEPKVSWFRDDQQVVE------------SDNVKILKETLGVCHLKIHALEVADQAEWKCI 823 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v-~g~p~p~v~W~k~g~~i~~------------~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 823 (1075)
...+..|++++|.|.+ .+.|.+.|+|+|++.++.. ..+..+. ..+ .|.|.+++.+|+|.|+|.
T Consensus 375 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~--~~~--~L~i~~v~~~D~G~Y~C~ 450 (581)
T 3o3u_N 375 NITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVL--PNG--SLFLPAVGIQDEGIFRCQ 450 (581)
T ss_dssp EEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEEC--TTS--CEEESSCCGGGCEEEEEE
T ss_pred ccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEc--CCc--eEEEeccccccCeEEEEE
Confidence 4668899999999999 7889999999998763211 2233332 222 699999999999999999
Q ss_pred EEeCCceE-EEEEEEEEEecCCCCCCeeeeecceeecCCC-eEEEEEEEEc-cCCCeeEEEECCEEcCCCCee-------
Q psy16863 824 ATNDFGQS-ITSCFLKLNVPKHYKKPKFLEELKAVLSEGG-AVNLECKVIG-VPQPTLKWFKDGRELKAGDIH------- 893 (1075)
Q Consensus 824 A~N~~G~~-~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~-~~~L~C~v~g-~p~p~v~W~k~g~~l~~~~~~------- 893 (1075)
|.|..|.. ...+.|.|..++. .|.+...... +.+|+ .+.|.|.+.| .|.|.|+|+|||.+|......
T Consensus 451 ~~n~~~~~~~~~~~l~V~~~~~--~p~i~~~~~~-~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~ 527 (581)
T 3o3u_N 451 AMNRNGKETKSNYRVRVYQIPG--KPEIVDSASE-LTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQT 527 (581)
T ss_dssp EECTTSCEEEEEEEEEEEBCCC--CCEEESCCSE-ECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEE
T ss_pred EEcCCCceeEEEEEEEEEcCCC--CCEEEcCCcc-cccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeee
Confidence 99999987 6778888887553 4544433333 44554 5577999998 599999999999998643211
Q ss_pred -------------EEEECCCC-ceeeEEEEEEEEeCCee
Q psy16863 894 -------------KIISGEDG-TCCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 894 -------------~i~~~~~~-~~d~G~Y~C~a~N~~G~ 918 (1075)
.|.+.... ..+.|.|+|.|+|.++.
T Consensus 528 ~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 528 RRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp EECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred EEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 23333333 23478899999998753
No 381
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.54 E-value=2.2e-14 Score=124.23 Aligned_cols=89 Identities=15% Similarity=0.244 Sum_probs=76.9
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECC--EEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDD--QQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g--~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
+|.|...+....+..|+.+.|.|.+.|.|.|.++|+|+| .++.....+. ...+...|.|.+++.+|+|.|+|.|.
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~---~~~~~~~L~i~~~~~~D~G~Y~C~a~ 78 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVD---AKSSTTSIFFPSAKRADSGNYKLKVK 78 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEE---EETTEEEEECTTBCGGGCEEEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEE---ecCCEEEEEECCCChhcCEEEEEEEE
Confidence 688887888889999999999999999999999999999 8886553222 23456789999999999999999999
Q ss_pred eCCceEEEEEEEEE
Q psy16863 826 NDFGQSITSCFLKL 839 (1075)
Q Consensus 826 N~~G~~~~s~~l~V 839 (1075)
|..|.+..++.|.|
T Consensus 79 N~~G~~~~~~~l~V 92 (93)
T 1wit_A 79 NELGEDEAIFEVIV 92 (93)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEE
Confidence 99999888888776
No 382
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=1.5e-14 Score=130.01 Aligned_cols=97 Identities=28% Similarity=0.443 Sum_probs=87.4
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeec-CCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVE-SDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
.+|.|...+....+.+|+.+.|.|.+.|.|.|.|+|+|+|..+.. ..++.+.....+.+.|.|.+++.+|+|.|+|.|.
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAA 86 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEE
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEE
Confidence 688998888889999999999999999999999999999999875 5677777665677899999999999999999999
Q ss_pred eCCceEEEEEEEEEEecC
Q psy16863 826 NDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~ 843 (1075)
|..|....++.|.|..++
T Consensus 87 N~~g~~~~~~~l~V~~~~ 104 (110)
T 2dm2_A 87 NPQGRISCTGRLMVQAVN 104 (110)
T ss_dssp CTTCCEEECCCEEEECCS
T ss_pred ECCCeEEEEEEEEEECCC
Confidence 999999888999988754
No 383
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=2e-14 Score=125.85 Aligned_cols=94 Identities=16% Similarity=0.260 Sum_probs=85.4
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
..+|.|...+.+..+.+|+.+.|.|.+ .|.+.++|||||..|..+.++.+..++..+.|.|.++..+|+|.|+|.|.|
T Consensus 5 ~~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (100)
T 2yuz_A 5 SSGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDA 82 (100)
T ss_dssp SCCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESS
T ss_pred CCCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcC
Confidence 357889999999999999999999999 778899999999999999999999999999999999999999999999999
Q ss_pred CCCceeeEEEEEeecCCC
Q psy16863 427 AVGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~~~~~ 444 (1075)
. ....++.|.|..+|.
T Consensus 83 ~--~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 83 Y--NVTLPAKVHVISGPS 98 (100)
T ss_dssp S--CCCEEEEEEEECCSC
T ss_pred C--CeeEEEEEEEeCCCC
Confidence 7 556788899987763
No 384
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.54 E-value=9.6e-14 Score=146.15 Aligned_cols=191 Identities=10% Similarity=0.092 Sum_probs=119.6
Q ss_pred cccceeeccceeEEEEEecCC----CceEEEEe-cCCCeeeE-Eec-CCCcc----ccCCCeEEEee--CCeEEEEEccc
Q psy16863 249 LHDIAVKVGTRARLLVEIRSP----TEIKCQFD-LNNTIPFS-FRA-QGDHP----IFGNRFRAINR--DGRTELNIRRV 315 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~----~~~~c~~~-~~~~~~~~-w~~-~~~~~----~~~~~~~~~~~--~~~~~L~I~~~ 315 (1075)
+..+.+.+|+.++|.|.+.+. ..+.|.-. .+....+. +.. .++.. ....|+.+..+ .+..+|+|.++
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (253)
T 3liz_H 7 SGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSL 86 (253)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 456678999999999998652 22222211 11121111 111 11110 11356776644 35678999999
Q ss_pred CCCCCEEEEEEEEeC----CeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEec-CCCc-EEEEEECCEe
Q psy16863 316 RRDDGGRYSVTASNE----SGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRS-PTEI-KIHWYRNDRK 389 (1075)
Q Consensus 316 ~~~d~G~Y~C~a~n~----~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g-~p~~-~v~W~k~g~~ 389 (1075)
+.+|+|.|.|.+.|. .+.....+.|.|......+|.+........+..|+.++|.|.+.+ .|.+ .+.|+|+|..
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~ 166 (253)
T 3liz_H 87 KSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 166 (253)
T ss_dssp CGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred ChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCee
Confidence 999999999999885 233344457777644445777765555556778999999999987 6655 9999999974
Q ss_pred cCCCCcEEEEEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEee
Q psy16863 390 LEENKIYRTQHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVL 440 (1075)
Q Consensus 390 l~~~~~~~~~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~ 440 (1075)
+...........+.. ..|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 167 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 167 SGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp TTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred cceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 421100001112221 368899999999 99999999998877666666554
No 385
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.53 E-value=5.8e-14 Score=123.45 Aligned_cols=94 Identities=23% Similarity=0.505 Sum_probs=85.0
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+.+..+..|+.+.|.|.+.|.|.|.+.|+|+|..+..+.++.+... .+.+.|.|.+++.+|+|.|+|.|.|
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n 83 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSED-KGGFFLEIHKTDTSDSGLYTCTVKN 83 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEe-CCEEEEEECCCCcccCEEEEEEEEe
Confidence 578888888889999999999999999999999999999999998888887644 4567899999999999999999999
Q ss_pred CCceEEEEEEEEEEe
Q psy16863 827 DFGQSITSCFLKLNV 841 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~ 841 (1075)
..|....++.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 84 SAGSVSSSCKLTIKA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEeEEEEEEEEe
Confidence 999998888888863
No 386
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.53 E-value=4.7e-14 Score=121.34 Aligned_cols=90 Identities=19% Similarity=0.217 Sum_probs=80.2
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
+.+|.|+..+.+..+.+|+.++|.|.+.+ +++.|+|||||.+|..+.++.+..++..+.|.|.+++.+|+|.|+|.|.|
T Consensus 3 ~~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 3 MALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 46889999999999999999999999976 45789999999999998999999999999999999999999999999976
Q ss_pred CCCceeeEEEEEeec
Q psy16863 427 AVGRSHCSCELSVLV 441 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~~ 441 (1075)
. ..++.|.|..
T Consensus 82 ~----~~sa~L~V~~ 92 (93)
T 1waa_A 82 T----KSAANLKVKE 92 (93)
T ss_dssp E----EEEEEEEEEC
T ss_pred C----cEEEEEEEEc
Confidence 3 4577787764
No 387
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.53 E-value=4.2e-14 Score=135.67 Aligned_cols=100 Identities=26% Similarity=0.455 Sum_probs=89.3
Q ss_pred CCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 746 NKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 746 ~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
..+|.|...+.+..+..|+.+.|.|.+.|.|.|.|+|+|+|..+..+.++.+.....+...|.|.+++.+|+|.|+|.|.
T Consensus 39 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 118 (154)
T 1fhg_A 39 HVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAV 118 (154)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEE
Confidence 36889999888999999999999999999999999999999999988888887665667899999999999999999999
Q ss_pred eCCceEEEEEEEEEEecCCC
Q psy16863 826 NDFGQSITSCFLKLNVPKHY 845 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~~~ 845 (1075)
|.+|....++.|.|..++.+
T Consensus 119 N~~G~~~~~~~l~V~~~p~~ 138 (154)
T 1fhg_A 119 NSLGEATCTAELLVETMGKE 138 (154)
T ss_dssp ETTEEEEEEEEEEEECC---
T ss_pred ECCCeEEEEEEEEEeCcCcC
Confidence 99999999999999876543
No 388
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.53 E-value=2.1e-14 Score=151.30 Aligned_cols=160 Identities=14% Similarity=0.195 Sum_probs=102.7
Q ss_pred cceeeeecCCeEEEEEEEecCCCCeEEEEEC--CEE---ee--c----------CC-cEEEEEeeCcEEEEEEccccCCC
Q psy16863 755 LKSCQATVNEEFKFTVQVSISPEPKVSWFRD--DQQ---VV--E----------SD-NVKILKETLGVCHLKIHALEVAD 816 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~--g~~---i~--~----------~~-~~~~~~~~~~~~~L~I~~~~~~D 816 (1075)
+....+.+|++++|.|.+.+.+.+.+.|||. +.. +. . .. ++.+....... |.|.+++.+|
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~--L~I~~v~~~D 85 (253)
T 3to4_D 8 PRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE--LRLQVANMSQ 85 (253)
T ss_dssp CSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC--CEEEEESCSS
T ss_pred CCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe--EEEccCChhh
Confidence 4456789999999999999899999999982 111 10 0 11 44443322222 9999999999
Q ss_pred CeEEEEEEEeCCc---e---EEEEEEEEEEecC-CCCCCeeeeec-c-eeecCCCeEEEEEEEEc-cCCC-eeEEEECCE
Q psy16863 817 QAEWKCIATNDFG---Q---SITSCFLKLNVPK-HYKKPKFLEEL-K-AVLSEGGAVNLECKVIG-VPQP-TLKWFKDGR 885 (1075)
Q Consensus 817 ~G~Y~C~A~N~~G---~---~~~s~~l~V~~~~-~~~~p~~~~~~-~-~~~~~g~~~~L~C~v~g-~p~p-~v~W~k~g~ 885 (1075)
+|.|.|.+.|..+ . ......|.|.... ...+|.+.... . ..+..|+.++|.|.+.| .|.+ .|+|+|||.
T Consensus 86 sG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~ 165 (253)
T 3to4_D 86 GRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGK 165 (253)
T ss_dssp CEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred CeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCE
Confidence 9999999998654 1 1123466666321 22344433211 1 12335789999999999 5666 899999999
Q ss_pred EcCCCC----------------ee----EEEECCCCcee-eEEEEEEEEeCC
Q psy16863 886 ELKAGD----------------IH----KIISGEDGTCC-LGIYTCEAHNCM 916 (1075)
Q Consensus 886 ~l~~~~----------------~~----~i~~~~~~~~d-~G~Y~C~a~N~~ 916 (1075)
++..+. .+ .+.+......| .|.|+|.|.|..
T Consensus 166 ~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 166 EVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp EECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred ECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 986521 12 12222111223 679999999964
No 389
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.53 E-value=2e-14 Score=151.29 Aligned_cols=168 Identities=14% Similarity=0.192 Sum_probs=108.9
Q ss_pred eEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECC--E--E-ee------------cCCcEEEEEeeCcEEEEEEccc
Q psy16863 750 KFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDD--Q--Q-VV------------ESDNVKILKETLGVCHLKIHAL 812 (1075)
Q Consensus 750 ~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g--~--~-i~------------~~~~~~~~~~~~~~~~L~I~~~ 812 (1075)
.+...+....+.+|++++|.|.+. .+.+.+.|||+. . . +. ...++.+.....+...|.|.++
T Consensus 5 ~v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v 83 (252)
T 1oga_E 5 GITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSA 83 (252)
T ss_dssp CEECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSC
T ss_pred cceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcC
Confidence 344556667899999999999996 568899999953 1 1 11 1245555432234568999999
Q ss_pred cCCCCeEEEEEEEeCC---ceEEEEEEEEEEecC-CCCCCeeeee-cc-eeecCCCeEEEEEEEEcc-CC-CeeEEEECC
Q psy16863 813 EVADQAEWKCIATNDF---GQSITSCFLKLNVPK-HYKKPKFLEE-LK-AVLSEGGAVNLECKVIGV-PQ-PTLKWFKDG 884 (1075)
Q Consensus 813 ~~~D~G~Y~C~A~N~~---G~~~~s~~l~V~~~~-~~~~p~~~~~-~~-~~~~~g~~~~L~C~v~g~-p~-p~v~W~k~g 884 (1075)
+.+|+|.|.|.+.|.. ........|.|..+. ...+|.+... .. ..+.+|+.++|.|.+.|. |. +.|+|+|||
T Consensus 84 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g 163 (252)
T 1oga_E 84 QKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNG 163 (252)
T ss_dssp CSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred ChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECC
Confidence 9999999999999962 111123456776421 1234544321 11 124468999999999986 65 489999999
Q ss_pred EEcCCCCe----------------eE----EEECCCCc-eeeEEEEEEEEeCCee
Q psy16863 885 RELKAGDI----------------HK----IISGEDGT-CCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 885 ~~l~~~~~----------------~~----i~~~~~~~-~d~G~Y~C~a~N~~G~ 918 (1075)
.++..+.. +. |.+..... .|.|.|+|.|.|..+.
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 164 KEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 218 (252)
T ss_dssp EEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred EECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 98865321 11 11111111 1468999999997654
No 390
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.53 E-value=4.2e-14 Score=126.40 Aligned_cols=95 Identities=20% Similarity=0.290 Sum_probs=85.5
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+..+.++.+... .+.+.|.|.+++.+|+|.|+|.|.|
T Consensus 12 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPAD-GAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEE-TTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeC-CCEEEEEEccCCHHhCEEEEEEEEc
Confidence 588999888899999999999999999999999999999999988888877554 4567899999999999999999999
Q ss_pred CCceEEEEEEEEEEec
Q psy16863 827 DFGQSITSCFLKLNVP 842 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~~ 842 (1075)
..|....++.|.|..+
T Consensus 91 ~~g~~~~~~~l~V~~~ 106 (107)
T 3irg_B 91 AAGEAYAAAAVTVLEP 106 (107)
T ss_dssp TTEEEEEEEEEEEEC-
T ss_pred CCCcEEEEEEEEEEcC
Confidence 9999998999988765
No 391
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.53 E-value=8.7e-15 Score=151.98 Aligned_cols=166 Identities=12% Similarity=0.173 Sum_probs=105.7
Q ss_pred eeeeecCcee-eccCCeEEEEEEEecC---CCc-EEEEEECCEecCCCCc-EEEE-EcC---CEEEEEEcccCCCCceeE
Q psy16863 351 AFIRRLHDIA-VKVGTRARLLVEIRSP---TEI-KIHWYRNDRKLEENKI-YRTQ-HDG---NFYFIDLSSVSLFDSGRW 420 (1075)
Q Consensus 351 ~~~~~~~~~~-v~~G~~v~l~C~~~g~---p~~-~v~W~k~g~~l~~~~~-~~~~-~~g---~~~~L~I~~v~~~d~G~Y 420 (1075)
.++.++.... +.+|++++|.|.+.+. |.+ .|+|||++..+..... .... .++ ....|.|.+++.+|+|.|
T Consensus 18 v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y 97 (239)
T 1i1c_A 18 VFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTF 97 (239)
T ss_dssp EEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCE
T ss_pred EEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeE
Confidence 3344444334 7899999999999876 655 9999999976643211 0011 112 124699999999999999
Q ss_pred EEEEEeCCCceeeEEEEEeecCCCCCCCeeeeecce-EEecCCeEEEEEEEEC-CCC-CeEEEEeCCEeccCC-------
Q psy16863 421 TCLAENAVGRSHCSCELSVLVPKAYKAPFFTKELEA-ILTEQGTVSLECKVMG-IPT-PQLIWYKDNKKIKAG------- 490 (1075)
Q Consensus 421 ~C~a~n~~g~~~~s~~l~V~~~~~~~~p~~~~~~~~-~~~~g~~v~l~C~~~g-~p~-~~v~W~~~g~~l~~~------- 490 (1075)
+|.|.|..|.......+... .....+|.+...... ....|+.+.|.|.+.| .|+ ..|+|+|||+++...
T Consensus 98 ~C~~~~~~~~~~~~~~v~~~-~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~ 176 (239)
T 1i1c_A 98 KCKVNSGAFPAPIEKSISKP-EGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTM 176 (239)
T ss_dssp EEEEECSSSSSCEEEEECCC-SSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEE
T ss_pred EEEEecccCCCCcEEEEecC-CCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceE
Confidence 99999998864332223210 111233444322221 1235789999999998 455 389999999987532
Q ss_pred ---CEE----EEEeCCCCCCCcEEEEEEEEecce
Q psy16863 491 ---DIF----ALTANPKDPSSLGTYTCEAVNCMG 517 (1075)
Q Consensus 491 ---~~~----~l~i~~~~~~d~G~Y~C~a~n~~g 517 (1075)
..+ .|.+...+..|.|.|+|.|.|...
T Consensus 177 ~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 177 DTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp CTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCC
Confidence 111 233333333468999999999764
No 392
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.52 E-value=2e-14 Score=148.82 Aligned_cols=164 Identities=17% Similarity=0.166 Sum_probs=107.1
Q ss_pred eccceeeeecCCeEEEEEEEecC--CCCeEEEEECC--E---Eee-------------cCCcEEEEEee-CcEEEEEEcc
Q psy16863 753 EGLKSCQATVNEEFKFTVQVSIS--PEPKVSWFRDD--Q---QVV-------------ESDNVKILKET-LGVCHLKIHA 811 (1075)
Q Consensus 753 ~~~~~~~~~~g~~~~l~C~v~g~--p~p~v~W~k~g--~---~i~-------------~~~~~~~~~~~-~~~~~L~I~~ 811 (1075)
..+..+.+.+|++++|.|.+.+. +.+.+.|||.. . .+. ...|+.+..+. .+.+.|.|.+
T Consensus 6 q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (230)
T 1ypz_F 6 QPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYS 85 (230)
T ss_dssp CSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECS
T ss_pred ccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECc
Confidence 34456678999999999999875 66799999852 1 110 13456555432 2578999999
Q ss_pred ccCCCCeEEEEEEEeC--Cce--EEEEEEEEEEecC------CCCCCeeeeecceeecCCCeEEEEEEEEcc-CC-CeeE
Q psy16863 812 LEVADQAEWKCIATND--FGQ--SITSCFLKLNVPK------HYKKPKFLEELKAVLSEGGAVNLECKVIGV-PQ-PTLK 879 (1075)
Q Consensus 812 ~~~~D~G~Y~C~A~N~--~G~--~~~s~~l~V~~~~------~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~-p~-p~v~ 879 (1075)
++.+|+|.|.|.+.|. ... ......|.|.... ....|.+..+....+..|+.++|.|.+.|. |. +.|+
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~v~ 165 (230)
T 1ypz_F 86 LEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRVY 165 (230)
T ss_dssp CCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCEEE
T ss_pred CChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeEEE
Confidence 9999999999999985 111 1123467776211 011222222111224568899999999987 75 5999
Q ss_pred EEE-CCEEcCCC---------Cee----EEEECCCCceeeEEEEEEEEeCCee
Q psy16863 880 WFK-DGRELKAG---------DIH----KIISGEDGTCCLGIYTCEAHNCMGT 918 (1075)
Q Consensus 880 W~k-~g~~l~~~---------~~~----~i~~~~~~~~d~G~Y~C~a~N~~G~ 918 (1075)
|+| ||.+|..+ ..+ .|.+..... .|.|+|.|.|..+.
T Consensus 166 W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~--~~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 166 WKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM--GKEHRCIVKHENNK 216 (230)
T ss_dssp EECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT--TSCEEEEEECSSCT
T ss_pred EEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC--CCEEEEEEEECCCC
Confidence 999 88877532 111 233333322 39999999998775
No 393
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=1.4e-13 Score=124.55 Aligned_cols=97 Identities=19% Similarity=0.331 Sum_probs=89.1
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.+|.|...+.+..+.+|+.++|.|.+.|.|.+.|+|+|+|..+..+.++.+...+....|.|.+++.+|+|.|+|.|.|.
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 85 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENK 85 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECS
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEEC
Confidence 58999988899999999999999999999999999999999998888888887777889999999999999999999999
Q ss_pred CCceeeEEEEEeecCCC
Q psy16863 428 VGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 428 ~g~~~~s~~l~V~~~~~ 444 (1075)
.|....++.|.|...|.
T Consensus 86 ~g~~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 86 LGSRQAQVNLTVVDKPD 102 (114)
T ss_dssp SCEEECCEEEEEECSCS
T ss_pred CCcEEEEEEEEEECCCC
Confidence 99998889999886653
No 394
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.52 E-value=7.5e-14 Score=125.16 Aligned_cols=93 Identities=15% Similarity=0.213 Sum_probs=75.2
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEee------CcEEEEEEccccCCCCeEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKET------LGVCHLKIHALEVADQAEW 820 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~------~~~~~L~I~~~~~~D~G~Y 820 (1075)
.||.+ .+.. ...+..+.|.|.+.|.|.|+|+|+|||++|..+.++.+.... .....|.|.+++..|+|.|
T Consensus 3 ~pP~I--~l~~--~~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 78 (126)
T 1he7_A 3 MPASV--QLHT--AVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNY 78 (126)
T ss_dssp CCCCC--CCCC--CCCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEE
T ss_pred CCCEE--EccC--CccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEE
Confidence 56765 2222 336678999999999999999999999999988776554322 1245799999999999999
Q ss_pred EEEEEeCCceEEEEEEEEEEecC
Q psy16863 821 KCIATNDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 821 ~C~A~N~~G~~~~s~~l~V~~~~ 843 (1075)
+|+|.|.+|.+..++.|.|...|
T Consensus 79 tC~A~N~~G~~~~t~~l~v~~~P 101 (126)
T 1he7_A 79 TLLAANPFGQASASIMAAFMDNP 101 (126)
T ss_dssp EEEEEETTEEEEEEEEECCCSCT
T ss_pred EEEEEECCCeEEEEEEEEEEcCC
Confidence 99999999999988888887654
No 395
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.51 E-value=1.7e-14 Score=120.98 Aligned_cols=82 Identities=18% Similarity=0.414 Sum_probs=70.5
Q ss_pred cceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEEE
Q psy16863 755 LKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSITS 834 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s 834 (1075)
+.++.+.+|+++.|.|.+.+ |.|.|+|||||++|..+.++.+...+ +.+.|.|.+++.+|+|.|+|.|.|. ..+
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~n~----~~~ 76 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAG-ARQVLRVQGARSGDAGEYLCDAPQD----SRI 76 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECS-SCEEEEESSCSSTTCEEEEEECTTT----CEE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecC-CeEEEEecCCCCcccEEEEEEECCE----EEE
Confidence 56778999999999999976 99999999999999999999887654 4678999999999999999999664 557
Q ss_pred EEEEEEec
Q psy16863 835 CFLKLNVP 842 (1075)
Q Consensus 835 ~~l~V~~~ 842 (1075)
+.|.|++|
T Consensus 77 a~l~V~eP 84 (84)
T 2lu7_A 77 FLVSVEEP 84 (84)
T ss_dssp EEEEECCC
T ss_pred EEEEEECC
Confidence 77888654
No 396
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.51 E-value=1.2e-13 Score=122.45 Aligned_cols=94 Identities=20% Similarity=0.375 Sum_probs=87.1
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.+|.|...+.+..+.+|+.+.|.|.+.|.|.+.|.|+|+|..+..+.++.+..++....|.|.++..+|+|.|+|.|.|.
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 86 (103)
T 3qp3_A 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNY 86 (103)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeC
Confidence 47888888889999999999999999999999999999999999888888888888889999999999999999999999
Q ss_pred CCceeeEEEEEeec
Q psy16863 428 VGRSHCSCELSVLV 441 (1075)
Q Consensus 428 ~g~~~~s~~l~V~~ 441 (1075)
.|....++.|.|..
T Consensus 87 ~G~~~~~~~l~V~~ 100 (103)
T 3qp3_A 87 KGEASDYATLDVTG 100 (103)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCcEEEEEEEEEEC
Confidence 99998888888864
No 397
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=2.1e-14 Score=129.17 Aligned_cols=97 Identities=27% Similarity=0.358 Sum_probs=87.6
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+....+.+|+.+.|.|.+.|.|.|.|.|+|+|..+....+..+.....+...|.|.+++.+|+|.|+|.|.|
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 87 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATN 87 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEEC
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEEC
Confidence 68999999999999999999999999999999999999999998777766665555667899999999999999999999
Q ss_pred CCceEEEEEEEEEEecC
Q psy16863 827 DFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~~~ 843 (1075)
..|....++.|.|..++
T Consensus 88 ~~g~~~~~~~l~V~~~p 104 (110)
T 2dm3_A 88 RAGQNSFSLELVVAAKE 104 (110)
T ss_dssp SSCEEEECCEEEEECCC
T ss_pred CCCEEEEEEEEEEeCCC
Confidence 99999889999998765
No 398
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.50 E-value=7.4e-14 Score=123.20 Aligned_cols=94 Identities=17% Similarity=0.210 Sum_probs=73.6
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEE--eeC--cEEEEEEccccCCCCeEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILK--ETL--GVCHLKIHALEVADQAEWKC 822 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~--~~~--~~~~L~I~~~~~~D~G~Y~C 822 (1075)
.||.+... .. ...++.+.|.|.+.|.|.|.++|+|||++|..+.++.... ... ....|.|.+++.+|+|.|+|
T Consensus 3 ~pP~i~~~-~~--~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 79 (103)
T 1wwb_X 3 FAPTITFL-ES--PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTL 79 (103)
T ss_dssp CCCCCCCC-CC--CCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEE
T ss_pred CCCEEEec-cC--ceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEE
Confidence 46765422 21 3467889999999999999999999999998876643321 111 13459999999999999999
Q ss_pred EEEeCCceEEEEEEEEEEecC
Q psy16863 823 IATNDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 823 ~A~N~~G~~~~s~~l~V~~~~ 843 (1075)
.|.|.+|.+..++.|.|..+|
T Consensus 80 ~A~N~~G~~~~~~~l~V~~~P 100 (103)
T 1wwb_X 80 IAKNEYGKDEKQISAHFMGWP 100 (103)
T ss_dssp EEECSSCEEEEEEEECCSCCC
T ss_pred EEEeCCCcEeEEEEEEECCCC
Confidence 999999999999988887544
No 399
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.49 E-value=4.9e-14 Score=118.13 Aligned_cols=82 Identities=17% Similarity=0.316 Sum_probs=73.0
Q ss_pred cCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeEE
Q psy16863 356 LHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCSC 435 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~ 435 (1075)
+.++.+.+|+++.|.|.+.+ |.+.|+|||||.+|..+.++.+..++..+.|.|.++..+|+|.|+|.| |....++
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----~n~~~~a 77 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDA----PQDSRIF 77 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEEC----TTTCEEE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEE----CCEEEEE
Confidence 56788999999999999965 788999999999999999999999999899999999999999999998 4456778
Q ss_pred EEEeecC
Q psy16863 436 ELSVLVP 442 (1075)
Q Consensus 436 ~l~V~~~ 442 (1075)
.|.|..|
T Consensus 78 ~l~V~eP 84 (84)
T 2lu7_A 78 LVSVEEP 84 (84)
T ss_dssp EEEECCC
T ss_pred EEEEECC
Confidence 8888654
No 400
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.48 E-value=9.1e-15 Score=149.55 Aligned_cols=164 Identities=12% Similarity=0.065 Sum_probs=103.6
Q ss_pred eEEeccceeeeecCCeEEEEEEEecCCC---CeEEEEECCEEeecCCc-EEE-EEee--CcEEEEEEccccCCCCeEEEE
Q psy16863 750 KFIEGLKSCQATVNEEFKFTVQVSISPE---PKVSWFRDDQQVVESDN-VKI-LKET--LGVCHLKIHALEVADQAEWKC 822 (1075)
Q Consensus 750 ~~~~~~~~~~~~~g~~~~l~C~v~g~p~---p~v~W~k~g~~i~~~~~-~~~-~~~~--~~~~~L~I~~~~~~D~G~Y~C 822 (1075)
.++..+....+.+|++++|.|.+.|.++ +.|+| ++.++..... ... ...+ .....|.|.+++.+|+|.|+|
T Consensus 6 v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y~C 83 (214)
T 1ow0_A 6 LSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTC 83 (214)
T ss_dssp CEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB--SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEEEE
T ss_pred EEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE--cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCeEEE
Confidence 3445566677889999999999999754 69999 4444422100 000 0000 024579999999999999999
Q ss_pred EEEeCCceEEEEEEEEEEecCCCCCCeeee-ecc-eeecCCCeEEEEEEEEcc-CC-CeeEEEECCEEcCCCCee--EEE
Q psy16863 823 IATNDFGQSITSCFLKLNVPKHYKKPKFLE-ELK-AVLSEGGAVNLECKVIGV-PQ-PTLKWFKDGRELKAGDIH--KII 896 (1075)
Q Consensus 823 ~A~N~~G~~~~s~~l~V~~~~~~~~p~~~~-~~~-~~~~~g~~~~L~C~v~g~-p~-p~v~W~k~g~~l~~~~~~--~i~ 896 (1075)
.|.|..+.......+.+ .....+|.+.. ... ..+..|+.++|.|.+.|. |. +.|+|+|||.+|..+... ...
T Consensus 84 ~~~~~~~~~~~~~~i~~--~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~ 161 (214)
T 1ow0_A 84 TAAYPESKTPLTATLSK--SGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASR 161 (214)
T ss_dssp EECCSSCSSCEEEEEEC--CSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCCE
T ss_pred EEecCCCCCceeEeecc--CCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCCc
Confidence 99998875433333322 11223454422 211 125678999999999996 43 489999999998654211 011
Q ss_pred EC---CCCc--------------eeeEEEEEEEEeCCe
Q psy16863 897 SG---EDGT--------------CCLGIYTCEAHNCMG 917 (1075)
Q Consensus 897 ~~---~~~~--------------~d~G~Y~C~a~N~~G 917 (1075)
.. .+++ .+.|.|+|.|.|..-
T Consensus 162 ~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 162 QEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp ECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred ccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 22 2221 136899999999753
No 401
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.48 E-value=4.2e-13 Score=117.22 Aligned_cols=89 Identities=17% Similarity=0.326 Sum_probs=78.3
Q ss_pred EEeccceeeeecCCeEEEEEEEecC-CCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCc
Q psy16863 751 FIEGLKSCQATVNEEFKFTVQVSIS-PEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFG 829 (1075)
Q Consensus 751 ~~~~~~~~~~~~g~~~~l~C~v~g~-p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G 829 (1075)
+...+.+..+.+|+.+.|.|.+.|. |.|.++|+|++..+..+.++.+.. ..+...|.|.+++.+|+|.|+|.|.|..|
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITY-EDGVAILYVKDITKLDDGTYRCKVVNDYG 82 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEE-ETTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEE-cCCeEEEEEecCChhhCeEEEEEEECCCC
Confidence 3445667889999999999999997 999999999999999888888754 34677999999999999999999999999
Q ss_pred eEEEEEEEEEE
Q psy16863 830 QSITSCFLKLN 840 (1075)
Q Consensus 830 ~~~~s~~l~V~ 840 (1075)
....++.|.|.
T Consensus 83 ~~~~~~~l~V~ 93 (97)
T 2bk8_A 83 EDSSYAELFVK 93 (97)
T ss_dssp EEEEEEEEEET
T ss_pred eEeEEEEEEEE
Confidence 99888888775
No 402
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.48 E-value=2.5e-13 Score=119.32 Aligned_cols=94 Identities=21% Similarity=0.479 Sum_probs=86.2
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.+|.|...+.+..+.+|+++.|.|.+.+.|.+.+.|+|+|..+..+.++.+..++..+.|.|.++..+|+|.|+|.|.|.
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 47788888888999999999999999999999999999999999888998888888889999999999999999999999
Q ss_pred CCceeeEEEEEeec
Q psy16863 428 VGRSHCSCELSVLV 441 (1075)
Q Consensus 428 ~g~~~~s~~l~V~~ 441 (1075)
.|....++.|.|..
T Consensus 85 ~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 85 AGSVSSSCKLTIKA 98 (99)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCcEeEEEEEEEEe
Confidence 99988888887753
No 403
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.48 E-value=1.6e-13 Score=123.14 Aligned_cols=96 Identities=16% Similarity=0.250 Sum_probs=77.9
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecC---CCCeEEEEECCE-Eee--cCCcEEEEEeeC-----cEEEEEEccccCCC
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSIS---PEPKVSWFRDDQ-QVV--ESDNVKILKETL-----GVCHLKIHALEVAD 816 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~---p~p~v~W~k~g~-~i~--~~~~~~~~~~~~-----~~~~L~I~~~~~~D 816 (1075)
.|.|+..++++.+.+|++++|.|.+.|. |.|.|.|||++. ++. .+.++.+..... ..+.|+|.+++.+|
T Consensus 7 ~~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 86 (126)
T 2dav_A 7 GILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNF 86 (126)
T ss_dssp SCSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTS
T ss_pred ccEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCccc
Confidence 4678888999999999999999999875 899999999752 121 234555532211 25789999999999
Q ss_pred CeEEEEEEEeCCceEEEEEEEEEEe-cC
Q psy16863 817 QAEWKCIATNDFGQSITSCFLKLNV-PK 843 (1075)
Q Consensus 817 ~G~Y~C~A~N~~G~~~~s~~l~V~~-~~ 843 (1075)
+|.|+|+|+|..|..++++.|.|++ |+
T Consensus 87 aG~Y~Cevsn~~g~~~~~~~L~V~~~~~ 114 (126)
T 2dav_A 87 AGNYRCEVTYKDKFDSCSFDLEVHESTG 114 (126)
T ss_dssp CEEEEEEEECSSCEEEECCEEEEECCCC
T ss_pred CEEEEEEEEeCCCcEEEEEEEEEEecCC
Confidence 9999999999999999999999998 54
No 404
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=1.6e-13 Score=124.96 Aligned_cols=96 Identities=13% Similarity=0.176 Sum_probs=80.6
Q ss_pred CCCCeEEec---cceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEE
Q psy16863 746 NKAPKFIEG---LKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKC 822 (1075)
Q Consensus 746 ~~~p~~~~~---~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 822 (1075)
..+|.|... .....+.+|+.+.|.|.+.|.|.|.++|+|+|..+. ..++.+.. ..+...|.|.+++.+|+|.|+|
T Consensus 19 ~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C 96 (118)
T 2e7c_A 19 AEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRT-SDFDTVFFVRQAARSDSGEYEL 96 (118)
T ss_dssp SEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEE-CSSEEEEEESSCCTTTCEEEEE
T ss_pred ccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEE-CCCeEEEEECCCChhcCEEEEE
Confidence 457777543 456789999999999999999999999999999997 45566543 3456789999999999999999
Q ss_pred EEEeCCceEEEEEEEEEEecC
Q psy16863 823 IATNDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 823 ~A~N~~G~~~~s~~l~V~~~~ 843 (1075)
.|.|..|....++.|.|..+|
T Consensus 97 ~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 97 SVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEECSSCEECCEEEEEEECCC
T ss_pred EEEeCCCeEEEEEEEEEEcCC
Confidence 999999998888888887643
No 405
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.48 E-value=1.7e-13 Score=122.39 Aligned_cols=96 Identities=23% Similarity=0.355 Sum_probs=87.0
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.+|.|...+....+.+|+++.|.|.+.|.|.+.|.|+|+|..+..+.++.+..++..+.|.|.+++.+|+|.|+|.|.|.
T Consensus 12 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 91 (107)
T 3irg_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcC
Confidence 47888888889999999999999999999999999999999999888888888888889999999999999999999999
Q ss_pred CCceeeEEEEEeecCC
Q psy16863 428 VGRSHCSCELSVLVPK 443 (1075)
Q Consensus 428 ~g~~~~s~~l~V~~~~ 443 (1075)
.|....++.|.|..+|
T Consensus 92 ~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 92 AGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TEEEEEEEEEEEEC--
T ss_pred CCcEEEEEEEEEEcCC
Confidence 9998888888887653
No 406
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.48 E-value=3.1e-13 Score=118.72 Aligned_cols=94 Identities=22% Similarity=0.293 Sum_probs=82.9
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEE-EcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQ-HDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~-~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
.+|.|...+.+..+.+|+.+.|.|.+.|.|.+.|.|+|+|..+....++.+. ..+....|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 4788888888999999999999999999999999999999999877766543 356677899999999999999999999
Q ss_pred CCCceeeEEEEEeec
Q psy16863 427 AVGRSHCSCELSVLV 441 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~~ 441 (1075)
..|....++.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999998888888753
No 407
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.47 E-value=8.2e-14 Score=118.83 Aligned_cols=87 Identities=15% Similarity=0.338 Sum_probs=73.7
Q ss_pred CCCeeeeecCceee--ccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEE
Q psy16863 348 DAPAFIRRLHDIAV--KVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v--~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
.||.|+.++.+..+ .+|+++.|.|.+.+ |.+.|+|||||++|..+.++.+..+|..+.|.|.++..+|+|.|+|.|.
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAG 81 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECS
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEc
Confidence 36777777766544 68999999999955 7789999999999999999999999999999999999999999999985
Q ss_pred eCCCceeeEEEEEe
Q psy16863 426 NAVGRSHCSCELSV 439 (1075)
Q Consensus 426 n~~g~~~~s~~l~V 439 (1075)
| .+.++.|+|
T Consensus 82 n----~~~~~~ltV 91 (91)
T 2lvc_A 82 D----ECAYFTVTI 91 (91)
T ss_dssp S----CEEEEEEEC
T ss_pred c----eEEEEEEEC
Confidence 5 455666654
No 408
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.47 E-value=2.1e-13 Score=152.45 Aligned_cols=157 Identities=17% Similarity=0.154 Sum_probs=99.8
Q ss_pred eecCCeEEEEEEEecC-CC---CeEEEEECCEEeecCCcE-EEEEee---CcEEEEEEccccCCCCeEEEEEEEeCCceE
Q psy16863 760 ATVNEEFKFTVQVSIS-PE---PKVSWFRDDQQVVESDNV-KILKET---LGVCHLKIHALEVADQAEWKCIATNDFGQS 831 (1075)
Q Consensus 760 ~~~g~~~~l~C~v~g~-p~---p~v~W~k~g~~i~~~~~~-~~~~~~---~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~ 831 (1075)
+..|++++|.|.+.|. |. ..|+|+|++..+...... ...... .....|.|..++.+|+|.|+|.|.|..+..
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 7889999999999987 33 379999999765322100 000000 023479999999999999999999988754
Q ss_pred EEEEEEEEEecCCCCCCeeeeecce-eecCCCeEEEEEEEEccC--CCeeEEEECCEEcCCCCeeE--------------
Q psy16863 832 ITSCFLKLNVPKHYKKPKFLEELKA-VLSEGGAVNLECKVIGVP--QPTLKWFKDGRELKAGDIHK-------------- 894 (1075)
Q Consensus 832 ~~s~~l~V~~~~~~~~p~~~~~~~~-~~~~g~~~~L~C~v~g~p--~p~v~W~k~g~~l~~~~~~~-------------- 894 (1075)
.....+.+. .....+|.+...... ...+|+.++|.|.+.|.+ .+.|+|+|||+++.......
T Consensus 260 ~~~~~v~~~-~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~ 338 (376)
T 2aty_A 260 PIEKTISKT-KGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSK 338 (376)
T ss_pred ceEEEEcCC-CCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEE
Confidence 333333221 111234444322222 233588999999999963 45899999999875321111
Q ss_pred EEECCCCceeeEEEEEEEEeCCe
Q psy16863 895 IISGEDGTCCLGIYTCEAHNCMG 917 (1075)
Q Consensus 895 i~~~~~~~~d~G~Y~C~a~N~~G 917 (1075)
|.+......|.|.|+|.|.|..-
T Consensus 339 L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 339 LNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred EEEcHHHhCCCCcEEEEEEeCCC
Confidence 11222222357999999999653
No 409
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.47 E-value=7.8e-14 Score=118.94 Aligned_cols=87 Identities=22% Similarity=0.352 Sum_probs=71.6
Q ss_pred CCCeEEecccee--eeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEE
Q psy16863 747 KAPKFIEGLKSC--QATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIA 824 (1075)
Q Consensus 747 ~~p~~~~~~~~~--~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A 824 (1075)
.||.|+.++.+. .+.+|+.+.|.|.+.+ |.|.++|+|||++|..+.++.+..+ ++.+.|.|.+++.+|+|.|+|.|
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~-~~~~~L~I~~v~~~D~G~Y~C~a 80 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENE-GPHRRLVLPATQPSDGGEFQCVA 80 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEE-TTEEEEEESSCCGGGCSEEEEEC
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEec-CCeEEEEeCCCChhhcEEEEEEE
Confidence 467777776664 4568999999999975 8899999999999999999988765 45789999999999999999999
Q ss_pred EeCCceEEEEEEEEE
Q psy16863 825 TNDFGQSITSCFLKL 839 (1075)
Q Consensus 825 ~N~~G~~~~s~~l~V 839 (1075)
.|. ..++.|+|
T Consensus 81 ~n~----~~~~~ltV 91 (91)
T 2lvc_A 81 GDE----CAYFTVTI 91 (91)
T ss_dssp SSC----EEEEEEEC
T ss_pred cce----EEEEEEEC
Confidence 775 44555553
No 410
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.47 E-value=4.6e-14 Score=125.36 Aligned_cols=95 Identities=17% Similarity=0.323 Sum_probs=84.9
Q ss_pred CCCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEE
Q psy16863 745 NNKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIA 824 (1075)
Q Consensus 745 ~~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A 824 (1075)
...+|.|...+.+..+.+|+++.|.|.+.|.|.|.+.|+|+|..+..+.++.+... .....|.|.+++.+|+|.|+|.|
T Consensus 11 ~~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a 89 (106)
T 1nct_A 11 TTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTT-KYKSTFEISSVQASDEGNYSVVV 89 (106)
T ss_dssp SSCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEEC-SSEEEEEECCCCSSCCSEEEECC
T ss_pred CCCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEEC-CCEEEEEECcCCchhCEEEEEEE
Confidence 34789999999999999999999999999999999999999999988888887653 34678999999999999999999
Q ss_pred EeCCceEEEEEEEEEE
Q psy16863 825 TNDFGQSITSCFLKLN 840 (1075)
Q Consensus 825 ~N~~G~~~~s~~l~V~ 840 (1075)
.|..|....++.|.|.
T Consensus 90 ~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 90 ENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp BCSSCBCCEEEEEEEC
T ss_pred EeCCCeEEEEEEEEEE
Confidence 9999998888887764
No 411
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.47 E-value=3e-13 Score=119.10 Aligned_cols=93 Identities=15% Similarity=0.239 Sum_probs=80.9
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEee--cCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVV--ESDNVKILKETLGVCHLKIHALEVADQAEWKCIA 824 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~--~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A 824 (1075)
.||.|...+....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+. ...++.+... .+...|.|.+++.+|+|.|+|.|
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a 82 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENT-DDLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEEC-SSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEec-CCEEEEEEeecCcccCEEEEEEE
Confidence 47788877888899999999999999999999999999999986 4456776543 34678999999999999999999
Q ss_pred EeCCceEEEEEEEEEE
Q psy16863 825 TNDFGQSITSCFLKLN 840 (1075)
Q Consensus 825 ~N~~G~~~~s~~l~V~ 840 (1075)
.|..|....++.|.|.
T Consensus 83 ~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 83 GNEFGSDSATVNIHIR 98 (100)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EeCCCcEEEEEEEEEE
Confidence 9999998888888775
No 412
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=1.2e-13 Score=122.53 Aligned_cols=96 Identities=10% Similarity=0.186 Sum_probs=77.7
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecC---CCCeEEEEECCE-Eeec--CCcEEEEEeeC-----cEEEEEEccccCC
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSIS---PEPKVSWFRDDQ-QVVE--SDNVKILKETL-----GVCHLKIHALEVA 815 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~---p~p~v~W~k~g~-~i~~--~~~~~~~~~~~-----~~~~L~I~~~~~~ 815 (1075)
..+.|+..++++.+.+|++++|.|.+.|. |.|.|+|||++. ++.. +.++.+..... ..+.|+|.+++.+
T Consensus 11 ~~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 90 (118)
T 2edn_A 11 PTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLG 90 (118)
T ss_dssp CSSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTT
T ss_pred CcceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChh
Confidence 46678888999999999999999999985 789999999752 2222 34555432211 2578999999999
Q ss_pred CCeEEEEEEEeCCceEEEEEEEEEEec
Q psy16863 816 DQAEWKCIATNDFGQSITSCFLKLNVP 842 (1075)
Q Consensus 816 D~G~Y~C~A~N~~G~~~~s~~l~V~~~ 842 (1075)
|+|.|+|+|+|..|..++++.|.|+.|
T Consensus 91 D~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 91 DRGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp TCSCEEEEEECSSCEEEEEECCEEECC
T ss_pred hCEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 999999999999999999999999875
No 413
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.46 E-value=1.1e-12 Score=136.05 Aligned_cols=189 Identities=11% Similarity=0.107 Sum_probs=115.2
Q ss_pred ccceeeccceeEEEEEecCC----Cce--EEEEe-cCCCeeeE-Ee-cCCC--c----cccCCCeEEEee--CCeEEEEE
Q psy16863 250 HDIAVKVGTRARLLVEIRSP----TEI--KCQFD-LNNTIPFS-FR-AQGD--H----PIFGNRFRAINR--DGRTELNI 312 (1075)
Q Consensus 250 ~~~~v~~g~~~~l~c~~~~~----~~~--~c~~~-~~~~~~~~-w~-~~~~--~----~~~~~~~~~~~~--~~~~~L~I 312 (1075)
..+.+.+|+.++|.|.+.+. ..+ .|... .+....+. .+ ..+. . .....|+.+..+ .+..+|+|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 87 (232)
T 3qhz_H 8 GPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTM 87 (232)
T ss_dssp CCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEE
T ss_pred CCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEE
Confidence 44568899999999998642 223 22211 11111111 11 1221 0 111357777654 36678999
Q ss_pred cccCCCCCEEEEEEEEeCC--------eeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEec-CC-CcEEE
Q psy16863 313 RRVRRDDGGRYSVTASNES--------GYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRS-PT-EIKIH 382 (1075)
Q Consensus 313 ~~~~~~d~G~Y~C~a~n~~--------g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g-~p-~~~v~ 382 (1075)
.+++.+|+|.|.|.+.+.. ........|.|......+|.+........+..|+.++|.|.+.+ .| ...+.
T Consensus 88 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~ 167 (232)
T 3qhz_H 88 TNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS 167 (232)
T ss_dssp CSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSCCEEE
T ss_pred CcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeEEE
Confidence 9999999999999999752 22334456777644455777764445556778999999999977 34 45788
Q ss_pred EEECCEecCCCCc-EEEEEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEe
Q psy16863 383 WYRNDRKLEENKI-YRTQHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSV 439 (1075)
Q Consensus 383 W~k~g~~l~~~~~-~~~~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V 439 (1075)
|+++|..+..... .....++.. ..|.|......| |.|+|.|.|..+.......+.+
T Consensus 168 W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 168 WNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp EGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 9999975421110 011122322 368888888888 9999999999877765555544
No 414
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.46 E-value=9.3e-14 Score=166.40 Aligned_cols=156 Identities=20% Similarity=0.320 Sum_probs=116.2
Q ss_pred CceeeccCCeEEEEEEE-ecCCCcEEEEEECCEecCC------------CCcEEEEEcCCEEEEEEcccCCCCceeEEEE
Q psy16863 357 HDIAVKVGTRARLLVEI-RSPTEIKIHWYRNDRKLEE------------NKIYRTQHDGNFYFIDLSSVSLFDSGRWTCL 423 (1075)
Q Consensus 357 ~~~~v~~G~~v~l~C~~-~g~p~~~v~W~k~g~~l~~------------~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~ 423 (1075)
....+.+|++++|.|.+ .+.|.+.|+|+|++..+.. ..+..+..++ .|.|.+++.+|+|.|+|.
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~D~G~Y~C~ 450 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG---SLFLPAVGIQDEGIFRCQ 450 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS---CEEESSCCGGGCEEEEEE
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc---eEEEeccccccCeEEEEE
Confidence 34678899999999998 7888899999998763311 1233333333 489999999999999999
Q ss_pred EEeCCCce-eeEEEEEeecCCCCCCCeeeeecceEEecCCe-EEEEEEEEC-CCCCeEEEEeCCEeccCCC---------
Q psy16863 424 AENAVGRS-HCSCELSVLVPKAYKAPFFTKELEAILTEQGT-VSLECKVMG-IPTPQLIWYKDNKKIKAGD--------- 491 (1075)
Q Consensus 424 a~n~~g~~-~~s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~-v~l~C~~~g-~p~~~v~W~~~g~~l~~~~--------- 491 (1075)
+.|..|.. ...+.|.|..++. .|.+...... +.+++. +.|.|.+.+ +|.+.|+|++||+++....
T Consensus 451 ~~n~~~~~~~~~~~l~V~~~~~--~p~i~~~~~~-~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~ 527 (581)
T 3o3u_N 451 AMNRNGKETKSNYRVRVYQIPG--KPEIVDSASE-LTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQT 527 (581)
T ss_dssp EECTTSCEEEEEEEEEEEBCCC--CCEEESCCSE-ECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEE
T ss_pred EEcCCCceeEEEEEEEEEcCCC--CCEEEcCCcc-cccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeee
Confidence 99999887 6778888877653 3454443333 445554 577999998 6999999999999885321
Q ss_pred -----------EEEEEeCCCC-CCCcEEEEEEEEeccee
Q psy16863 492 -----------IFALTANPKD-PSSLGTYTCEAVNCMGA 518 (1075)
Q Consensus 492 -----------~~~l~i~~~~-~~d~G~Y~C~a~n~~g~ 518 (1075)
...|.+..+. ..+.|.|+|.|.|..+.
T Consensus 528 ~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 528 RRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp EECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred EEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 1247788777 55588999999998643
No 415
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=1e-13 Score=121.96 Aligned_cols=93 Identities=20% Similarity=0.405 Sum_probs=80.1
Q ss_pred CCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeec-CCcEEEEEeeCcEEEEEEccccCCCCeEEEEEE
Q psy16863 746 NKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVE-SDNVKILKETLGVCHLKIHALEVADQAEWKCIA 824 (1075)
Q Consensus 746 ~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A 824 (1075)
..+|.|...+....+..|+.+.|.|.+.|.|.|.+.|+|+|..+.. ..++.+. ..+ .|.|.+++.+|+|.|+|.|
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~--~~~--~L~i~~v~~~d~G~Y~C~a 81 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQ--EQG--TLQIKNLRISDTGTYTCVA 81 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEEC--TTC--CEEEESCCTTTCCEEEEEE
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEc--CCC--EEEEccCCcccCEEEEEEE
Confidence 3689999889999999999999999999999999999999998873 3444432 222 6999999999999999999
Q ss_pred EeCCceEEEEEEEEEEec
Q psy16863 825 TNDFGQSITSCFLKLNVP 842 (1075)
Q Consensus 825 ~N~~G~~~~s~~l~V~~~ 842 (1075)
.|..|....++.|.|..+
T Consensus 82 ~n~~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 82 TSSSGETSWSAVLDVTES 99 (100)
T ss_dssp ECSSCCCBCCEEEEEESC
T ss_pred EcCCCCEEEEEEEEEecC
Confidence 999999988888888754
No 416
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.46 E-value=3.7e-13 Score=121.75 Aligned_cols=99 Identities=23% Similarity=0.315 Sum_probs=87.0
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCC-CCcEEEEEcC-CEEEEEEcccCCCCceeEEEEEE
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEE-NKIYRTQHDG-NFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~-~~~~~~~~~g-~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
.+|.|+..+.+..+.+|++++|.|.+.|.|.+.|.|+|+|..+.. ..++.+..++ ....|.|.+++.+|+|.|+|.|.
T Consensus 14 ~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 93 (116)
T 2kkq_A 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAV 93 (116)
T ss_dssp BCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEE
T ss_pred CCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEE
Confidence 588999999999999999999999999999999999999999875 4677776654 45579999999999999999999
Q ss_pred eCCCceeeEEEEEeecCCCCC
Q psy16863 426 NAVGRSHCSCELSVLVPKAYK 446 (1075)
Q Consensus 426 n~~g~~~~s~~l~V~~~~~~~ 446 (1075)
|..|....++.|.|..+|...
T Consensus 94 N~~G~~~~~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 94 NEAGVTTCNTRLDVTARPNQT 114 (116)
T ss_dssp ETTEEEEEEEEEEEECCSCCC
T ss_pred cCCCeEEEEEEEEEeCCCCCC
Confidence 999999999999998876543
No 417
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.46 E-value=6.7e-13 Score=138.19 Aligned_cols=170 Identities=18% Similarity=0.229 Sum_probs=113.5
Q ss_pred ecCceeeccCCeEEEEEEEecCC----CcEEEEEECC--E---ec---C----------------CCCcEEEEEc--CCE
Q psy16863 355 RLHDIAVKVGTRARLLVEIRSPT----EIKIHWYRND--R---KL---E----------------ENKIYRTQHD--GNF 404 (1075)
Q Consensus 355 ~~~~~~v~~G~~v~l~C~~~g~p----~~~v~W~k~g--~---~l---~----------------~~~~~~~~~~--g~~ 404 (1075)
.+..+.+.+|++++|.|.+.+.+ ...+.|||.. . .+ . ...|+.+..+ ...
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 85 (239)
T 3tv3_H 6 ESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNL 85 (239)
T ss_dssp EESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTE
T ss_pred cCCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCE
Confidence 34567899999999999998765 4599999842 1 11 1 1245555543 456
Q ss_pred EEEEEcccCCCCceeEEEEEEeCCC-------------ceeeEEEEEeecCCCCCCCeee-eecceEEecCCeEEEEEEE
Q psy16863 405 YFIDLSSVSLFDSGRWTCLAENAVG-------------RSHCSCELSVLVPKAYKAPFFT-KELEAILTEQGTVSLECKV 470 (1075)
Q Consensus 405 ~~L~I~~v~~~d~G~Y~C~a~n~~g-------------~~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~v~l~C~~ 470 (1075)
..|.|.+++.+|+|.|.|.+.+..+ .......|.|...+ ..+|.+. ..+...+..|+.+.|.|.+
T Consensus 86 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~-~~~P~v~~~~~~~~~~~g~~v~l~C~~ 164 (239)
T 3tv3_H 86 VFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSAS-TKGPSVFPLAPSSKSTSGGTAALGCLV 164 (239)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCC-CBCCEEEEECCCCCC--TTEEEEEEEE
T ss_pred EEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCC-CcCCEEEEECCChhhccCCcEEEEEEE
Confidence 7899999999999999999987532 11123456665322 2334444 3333335579999999999
Q ss_pred EC-CCCC-eEEEEeCCEecc---------CCCEE----EEEeCCCCCCCcEEEEEEEEecceeeEEEEEEE
Q psy16863 471 MG-IPTP-QLIWYKDNKKIK---------AGDIF----ALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVI 526 (1075)
Q Consensus 471 ~g-~p~~-~v~W~~~g~~l~---------~~~~~----~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~ 526 (1075)
.+ .|.+ .+.|+++|..+. .+..+ .|.+......| |.|+|.|.|..+.......|.
T Consensus 165 ~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 234 (239)
T 3tv3_H 165 KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 234 (239)
T ss_dssp EEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECC
T ss_pred eeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEec
Confidence 98 4544 689999987431 12222 46777777788 999999999987665555443
No 418
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.45 E-value=6.7e-13 Score=138.23 Aligned_cols=190 Identities=11% Similarity=0.077 Sum_probs=117.7
Q ss_pred cccceeeccceeEEEEEecCCC------ceEEEEe-cCCCeeeE-Eec------CCCcc----ccCCCeEEEee--CCeE
Q psy16863 249 LHDIAVKVGTRARLLVEIRSPT------EIKCQFD-LNNTIPFS-FRA------QGDHP----IFGNRFRAINR--DGRT 308 (1075)
Q Consensus 249 ~~~~~v~~g~~~~l~c~~~~~~------~~~c~~~-~~~~~~~~-w~~------~~~~~----~~~~~~~~~~~--~~~~ 308 (1075)
+..+.+.+|+.++|.|.+.+.. .+.|.-. .+....+. ... .+... ....|+.+..+ .+..
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 86 (239)
T 3tv3_H 7 SGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLV 86 (239)
T ss_dssp ESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEE
T ss_pred CCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEE
Confidence 4456789999999999987532 2222211 11111111 111 11110 01356666543 4567
Q ss_pred EEEEcccCCCCCEEEEEEEEeCCe-------------eEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEec
Q psy16863 309 ELNIRRVRRDDGGRYSVTASNESG-------------YSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRS 375 (1075)
Q Consensus 309 ~L~I~~~~~~d~G~Y~C~a~n~~g-------------~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g 375 (1075)
.|+|.+++.+|+|.|.|.+.+..+ .......|.|....+.+|.+........+..|+.++|.|.+.+
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~ 166 (239)
T 3tv3_H 87 FLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKD 166 (239)
T ss_dssp EEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEEee
Confidence 899999999999999999987521 1223346777644456777765555556678999999999977
Q ss_pred -CC-CcEEEEEECCEecCCCCc-EEEEEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEe
Q psy16863 376 -PT-EIKIHWYRNDRKLEENKI-YRTQHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSV 439 (1075)
Q Consensus 376 -~p-~~~v~W~k~g~~l~~~~~-~~~~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V 439 (1075)
.| +..+.|+++|..+..... .....++.. ..|.|.....+| |.|+|.|.|..+.......|.+
T Consensus 167 ~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 167 YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp EBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEecc
Confidence 44 457999999975421111 111123322 358888888888 9999999999877665555443
No 419
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.45 E-value=8.6e-13 Score=136.88 Aligned_cols=170 Identities=15% Similarity=0.207 Sum_probs=110.2
Q ss_pred cCceeeccCCeEEEEEEEecC----CCcEEEEEECC--E---ec-----CC-----------CCcEEEEEc--CCEEEEE
Q psy16863 356 LHDIAVKVGTRARLLVEIRSP----TEIKIHWYRND--R---KL-----EE-----------NKIYRTQHD--GNFYFID 408 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~----p~~~v~W~k~g--~---~l-----~~-----------~~~~~~~~~--g~~~~L~ 408 (1075)
+..+.+.+|++++|.|.+.+. +...|.|||.. . .+ .. ..|+.+..+ .....|.
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 86 (232)
T 3qhz_H 7 SGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLT 86 (232)
T ss_dssp ECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEE
T ss_pred CCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEE
Confidence 345678999999999999763 23455999842 1 11 01 146666543 3567899
Q ss_pred EcccCCCCceeEEEEEEeCC--------CceeeEEEEEeecCCCCCCCeee-eecceEEecCCeEEEEEEEECCCCC--e
Q psy16863 409 LSSVSLFDSGRWTCLAENAV--------GRSHCSCELSVLVPKAYKAPFFT-KELEAILTEQGTVSLECKVMGIPTP--Q 477 (1075)
Q Consensus 409 I~~v~~~d~G~Y~C~a~n~~--------g~~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~v~l~C~~~g~p~~--~ 477 (1075)
|.+++.+|+|.|.|.+.+.. ........|.|...+ ..+|.+. ..+...+..|+.++|.|.+.+.+++ .
T Consensus 87 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~ 165 (232)
T 3qhz_H 87 MTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSAS-TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT 165 (232)
T ss_dssp ECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSC-CBCCEEEEECC-------CEEEEEEEEEEEBSSCCE
T ss_pred ECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCC-CCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeE
Confidence 99999999999999999763 112233456666422 2344444 3333345679999999999975443 6
Q ss_pred EEEEeCCEecc---------CCCEE----EEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEE
Q psy16863 478 LIWYKDNKKIK---------AGDIF----ALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIA 527 (1075)
Q Consensus 478 v~W~~~g~~l~---------~~~~~----~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v 527 (1075)
+.|+++|..+. .+..+ .|.+......| |.|+|.|.|..+.......+.+
T Consensus 166 v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 166 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp EEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 88999987431 12222 46677777778 9999999999877666555443
No 420
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=1.4e-13 Score=120.86 Aligned_cols=89 Identities=26% Similarity=0.520 Sum_probs=77.9
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.||.|...+.+..+.+|+++.|.|.+.|.|.|.+.|+|+|..+...... ...+...|.|.+++.+|+|.|+|.|.|
T Consensus 10 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~C~a~N 85 (99)
T 2yr3_A 10 VAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARST----CEAGVAELHIQDALPEDHGTYTCLAEN 85 (99)
T ss_dssp EEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCE----EETTEEEEEECSCCTTCCBCEEEEEEC
T ss_pred cCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceE----eeCCeEEEEECCCChhhCEEEEEEEEE
Confidence 5888988888899999999999999999999999999999988765432 123467899999999999999999999
Q ss_pred CCceEEEEEEEEE
Q psy16863 827 DFGQSITSCFLKL 839 (1075)
Q Consensus 827 ~~G~~~~s~~l~V 839 (1075)
..|....++.|.|
T Consensus 86 ~~g~~~~~~~l~V 98 (99)
T 2yr3_A 86 ALGQVSCSAWVTV 98 (99)
T ss_dssp SSCEEEEECCEEE
T ss_pred CCCeEEEEEEEEE
Confidence 9999888877776
No 421
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.44 E-value=8e-13 Score=117.96 Aligned_cols=94 Identities=15% Similarity=0.253 Sum_probs=75.8
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCC---CeEEEEECCEEeec---CCcEEEEEee-----CcEEEEEEccccCC
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPE---PKVSWFRDDQQVVE---SDNVKILKET-----LGVCHLKIHALEVA 815 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~---p~v~W~k~g~~i~~---~~~~~~~~~~-----~~~~~L~I~~~~~~ 815 (1075)
..|.|+..+.++.+..|++++|.|.+.|.|. |.|+|||++..... ..++.+.... .+...|.|.+++.+
T Consensus 3 p~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred CccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 3678888888999999999999999999998 99999998733221 2355543211 12568999999999
Q ss_pred CCeEEEEEEEeCCceEEEEEEEEEE
Q psy16863 816 DQAEWKCIATNDFGQSITSCFLKLN 840 (1075)
Q Consensus 816 D~G~Y~C~A~N~~G~~~~s~~l~V~ 840 (1075)
|+|.|+|.|.|..|.+.+++.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCEEEEEEEecCCCceEEEEEEEEe
Confidence 9999999999999999999988885
No 422
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.44 E-value=3.5e-13 Score=116.64 Aligned_cols=89 Identities=20% Similarity=0.289 Sum_probs=77.3
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECC--EecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRND--RKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g--~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
+|.|...+....+.+|+.+.|.|.+.|.|.|.|+|+|+| ..+..... +........|.|.++..+|+|.|+|.|.|
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~--~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 79 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELL--VDAKSSTTSIFFPSAKRADSGNYKLKVKN 79 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSE--EEEETTEEEEECTTBCGGGCEEEEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEE--EEecCCEEEEEECCCChhcCEEEEEEEEc
Confidence 688877788899999999999999999999999999999 88876543 33445567899999999999999999999
Q ss_pred CCCceeeEEEEEe
Q psy16863 427 AVGRSHCSCELSV 439 (1075)
Q Consensus 427 ~~g~~~~s~~l~V 439 (1075)
..|....++.|.|
T Consensus 80 ~~G~~~~~~~l~V 92 (93)
T 1wit_A 80 ELGEDEAIFEVIV 92 (93)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEE
Confidence 9998888877776
No 423
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.44 E-value=3.2e-13 Score=139.74 Aligned_cols=164 Identities=16% Similarity=0.179 Sum_probs=109.5
Q ss_pred eeecCceeeccCCeEEEEEEEecC--CCcEEEEEECC--Ee---cC-------------CCCcEEEEEcC--CEEEEEEc
Q psy16863 353 IRRLHDIAVKVGTRARLLVEIRSP--TEIKIHWYRND--RK---LE-------------ENKIYRTQHDG--NFYFIDLS 410 (1075)
Q Consensus 353 ~~~~~~~~v~~G~~v~l~C~~~g~--p~~~v~W~k~g--~~---l~-------------~~~~~~~~~~g--~~~~L~I~ 410 (1075)
...+..+.+.+|++++|.|.+.+. +.+.+.|||.. .. +. ...|+.+..+. ....|.|.
T Consensus 5 ~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (230)
T 1ypz_F 5 EQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIY 84 (230)
T ss_dssp ECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEEC
T ss_pred cccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEEC
Confidence 344567789999999999999764 56789999853 11 10 23556655432 56789999
Q ss_pred ccCCCCceeEEEEEEeC--CC--ceeeEEEEEeecCC------CCCCCeeeeecceEEecCCeEEEEEEEECC-CC-CeE
Q psy16863 411 SVSLFDSGRWTCLAENA--VG--RSHCSCELSVLVPK------AYKAPFFTKELEAILTEQGTVSLECKVMGI-PT-PQL 478 (1075)
Q Consensus 411 ~v~~~d~G~Y~C~a~n~--~g--~~~~s~~l~V~~~~------~~~~p~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~v 478 (1075)
+++.+|+|.|.|.+.+. .. .......|.|.... ....|.+..+....+.+|+.++|.|.+.|. |. +.|
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~v 164 (230)
T 1ypz_F 85 SLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRV 164 (230)
T ss_dssp SCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCEE
T ss_pred cCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeEE
Confidence 99999999999999885 11 11123467776211 011122222212224568899999999986 75 599
Q ss_pred EEEe-CCEeccCC---------CEE----EEEeCCCCCCCcEEEEEEEEeccee
Q psy16863 479 IWYK-DNKKIKAG---------DIF----ALTANPKDPSSLGTYTCEAVNCMGA 518 (1075)
Q Consensus 479 ~W~~-~g~~l~~~---------~~~----~l~i~~~~~~d~G~Y~C~a~n~~g~ 518 (1075)
+|++ ||+.+..+ ..+ .|.|..... + |.|+|.|.|..+.
T Consensus 165 ~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 165 YWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp EEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred EEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 9999 88776432 222 477776654 4 9999999998764
No 424
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.44 E-value=1.5e-13 Score=119.37 Aligned_cols=87 Identities=16% Similarity=0.261 Sum_probs=77.2
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.||.|...+....+.+|+.+.|.|.+.|.| |.+.|+|+|..+..+.++.+. . ..|.|.+++.+|+|.|+|.|.|
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~---~--~~L~i~~~~~~D~G~Y~C~a~n 81 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT---G--EEVEVRDSIPADSGLYACVTSS 81 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC---S--SEEEESSCCGGGSEEEEEEEEE
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe---C--CEEEECCCChHHCEEEEEEecc
Confidence 688888888889999999999999999998 899999999999887776653 2 2799999999999999999999
Q ss_pred CCceEEEEEEEEE
Q psy16863 827 DFGQSITSCFLKL 839 (1075)
Q Consensus 827 ~~G~~~~s~~l~V 839 (1075)
..|....++.|.|
T Consensus 82 ~~g~~~~~~~l~V 94 (95)
T 2ckn_A 82 PSGSDTTYFSVNV 94 (95)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEE
Confidence 9999888877766
No 425
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.44 E-value=1.1e-12 Score=136.63 Aligned_cols=173 Identities=10% Similarity=0.152 Sum_probs=111.8
Q ss_pred cccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCC--------------Ccc---ccCCCeEEEee-CCeE
Q psy16863 247 RRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQG--------------DHP---IFGNRFRAINR-DGRT 308 (1075)
Q Consensus 247 ~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~--------------~~~---~~~~~~~~~~~-~~~~ 308 (1075)
..+..+.+.+|+.++|.|.+..+ ...+.|++.+ ... ....++.+... .+..
T Consensus 4 q~p~~v~v~~G~~v~L~C~~~~~-----------~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 72 (238)
T 1bec_A 4 QSPRNKVAVTGGKVTLSCQQTNN-----------HNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQF 72 (238)
T ss_dssp EECSEEEEETTCCEEEEEEESSC-----------CSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEE
T ss_pred cCCCeeEEeCCCcEEEEEEeCCC-----------CceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEE
Confidence 34566788999999999998532 2233343321 000 01356666542 4567
Q ss_pred EEEEcccCCCCCEEEEEEEEeCCe-----eEEEEEEEEEecC--CCCCCeeee-ecCceeeccCCeEEEEEEEecC-CC-
Q psy16863 309 ELNIRRVRRDDGGRYSVTASNESG-----YSTAKFELSVESQ--VPDAPAFIR-RLHDIAVKVGTRARLLVEIRSP-TE- 378 (1075)
Q Consensus 309 ~L~I~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~--~~~~p~~~~-~~~~~~v~~G~~v~l~C~~~g~-p~- 378 (1075)
+|+|.+++.+|+|.|.|.+.|..+ .......|.|... ...+|.+.. .+....+.+|+.++|.|.+.|. |.
T Consensus 73 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~ 152 (238)
T 1bec_A 73 SLILELATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDH 152 (238)
T ss_dssp EEEESSCCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCC
T ss_pred EEEEecCCcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCC
Confidence 999999999999999999998631 1122345777642 123566543 3445567789999999999884 64
Q ss_pred cEEEEEECCEecCCCCcE----EEEEcCCEE---EEEEcccCCCC-ceeEEEEEEeCCCc
Q psy16863 379 IKIHWYRNDRKLEENKIY----RTQHDGNFY---FIDLSSVSLFD-SGRWTCLAENAVGR 430 (1075)
Q Consensus 379 ~~v~W~k~g~~l~~~~~~----~~~~~g~~~---~L~I~~v~~~d-~G~Y~C~a~n~~g~ 430 (1075)
+.|.|+|||..+..+... ....++... .|.|......| .|.|+|.|.|....
T Consensus 153 ~~v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 212 (238)
T 1bec_A 153 VELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLS 212 (238)
T ss_dssp EEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCCC
T ss_pred cEEEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCCC
Confidence 499999999998765322 112344322 34555444444 57899999998543
No 426
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.44 E-value=1e-13 Score=124.10 Aligned_cols=94 Identities=21% Similarity=0.469 Sum_probs=73.0
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+.+..+..|+.+.|.|.+.|.|.|.+.|+|+|..+....++.+.. +...|.|.+++.+|+|.|+|.|.|
T Consensus 9 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y~C~a~n 85 (108)
T 3kvq_A 9 VAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKD---GNRNLTIRRVRKEDEGLYTCQACS 85 (108)
T ss_dssp --CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEET---TTTEEEECSCCGGGCEEEEEEEC-
T ss_pred CCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeC---CCcEEEEeecCcccCEEEEEEEEe
Confidence 58888888888999999999999999999999999999999998777765532 224799999999999999999999
Q ss_pred CCceEEEEEEEEEEecC
Q psy16863 827 DFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~~~ 843 (1075)
..|....++.|.|..++
T Consensus 86 ~~g~~~~~~~l~V~~~~ 102 (108)
T 3kvq_A 86 VLGCAKVEAFFIIEGAQ 102 (108)
T ss_dssp ---CEEEEEEEEEEC--
T ss_pred CCCceEEEEEEEEeCCC
Confidence 99999999999998754
No 427
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.44 E-value=6.9e-13 Score=138.58 Aligned_cols=191 Identities=13% Similarity=0.134 Sum_probs=116.3
Q ss_pred ccccceeeccceeEEEEEecCC----CceEEEEe-cCCCeeeE-Eec-CCCcc----ccCCCeEEEee--CCeEEEEEcc
Q psy16863 248 RLHDIAVKVGTRARLLVEIRSP----TEIKCQFD-LNNTIPFS-FRA-QGDHP----IFGNRFRAINR--DGRTELNIRR 314 (1075)
Q Consensus 248 ~~~~~~v~~g~~~~l~c~~~~~----~~~~c~~~-~~~~~~~~-w~~-~~~~~----~~~~~~~~~~~--~~~~~L~I~~ 314 (1075)
.+..+.+.+|+.++|.|.+.+. ..+.|.-. .+....+. +.. .+... ....|+.+..+ .+..+|+|.+
T Consensus 5 ~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 84 (248)
T 3u2s_H 5 ESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNS 84 (248)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred cCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECC
Confidence 3456778999999999998642 22333211 11122221 111 11110 11457776653 4567899999
Q ss_pred cCCCCCEEEEEEEEeCC----------------------eeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEE
Q psy16863 315 VRRDDGGRYSVTASNES----------------------GYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVE 372 (1075)
Q Consensus 315 ~~~~d~G~Y~C~a~n~~----------------------g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~ 372 (1075)
++.+|+|.|.|.+.+.. ........|.|....+.+|.+........+..|+.++|.|.
T Consensus 85 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~ 164 (248)
T 3u2s_H 85 LRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL 164 (248)
T ss_dssp CCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEEEEE
T ss_pred CCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEEEE
Confidence 99999999999998742 12223457777654556677665555556678999999999
Q ss_pred Eec-CC-CcEEEEEECCEecCCCC-cEEEEEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEe
Q psy16863 373 IRS-PT-EIKIHWYRNDRKLEENK-IYRTQHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSV 439 (1075)
Q Consensus 373 ~~g-~p-~~~v~W~k~g~~l~~~~-~~~~~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V 439 (1075)
+.+ .| .+.+.|+++|..+.... ......+|.. ..|.|......| |.|+|.|.|..+.......+.+
T Consensus 165 ~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 236 (248)
T 3u2s_H 165 VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 236 (248)
T ss_dssp EEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred EeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEcc
Confidence 976 45 57899999997542111 0111123322 357888888888 9999999998877665544443
No 428
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.44 E-value=5.9e-13 Score=137.80 Aligned_cols=169 Identities=14% Similarity=0.216 Sum_probs=111.7
Q ss_pred eeeeecCCeEEEEEEEecC--CCCeEEEEECC--E---Ee-e-------------cCCcEEEEEee-CcEEEEEEccccC
Q psy16863 757 SCQATVNEEFKFTVQVSIS--PEPKVSWFRDD--Q---QV-V-------------ESDNVKILKET-LGVCHLKIHALEV 814 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v~g~--p~p~v~W~k~g--~---~i-~-------------~~~~~~~~~~~-~~~~~L~I~~~~~ 814 (1075)
...+.+|++++|.|.+.+. +...+.|||.. . .+ . ...|+.+..+. .+.+.|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (230)
T 3n9g_H 9 AEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRS 88 (230)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCh
Confidence 3568899999999999863 35689999832 1 11 0 12466665543 3578899999999
Q ss_pred CCCeEEEEEEEeCC-----ceEE---EEEEEEEEecCCCCCCeeee-ecceeecCCCeEEEEEEEEccCC--CeeEEEEC
Q psy16863 815 ADQAEWKCIATNDF-----GQSI---TSCFLKLNVPKHYKKPKFLE-ELKAVLSEGGAVNLECKVIGVPQ--PTLKWFKD 883 (1075)
Q Consensus 815 ~D~G~Y~C~A~N~~-----G~~~---~s~~l~V~~~~~~~~p~~~~-~~~~~~~~g~~~~L~C~v~g~p~--p~v~W~k~ 883 (1075)
+|+|.|.|.+.|.. +... ....|.|...+ ..+|.+.. .....+.+|+.++|.|.+.|.++ +.|+| |
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~-~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W--~ 165 (230)
T 3n9g_H 89 EDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSAS-TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--N 165 (230)
T ss_dssp GGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSC-CBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEE--G
T ss_pred hhCEEEEEEEccCCCCcccccccccCCCEEEEEEecC-CCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEE--C
Confidence 99999999999864 1111 23456665322 23444432 22223458999999999998543 46899 6
Q ss_pred CEEcCC-----------CCee----EEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEEec
Q psy16863 884 GRELKA-----------GDIH----KIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLGFE 929 (1075)
Q Consensus 884 g~~l~~-----------~~~~----~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 929 (1075)
|..+.. +..+ .|.+......| |.|+|.|.|..+.....+.|.+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~~ 225 (230)
T 3n9g_H 166 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPKS 225 (230)
T ss_dssp GGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCCT
T ss_pred CcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCCC
Confidence 655532 1111 34444444567 999999999998887777766643
No 429
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.43 E-value=1.2e-12 Score=132.67 Aligned_cols=159 Identities=13% Similarity=0.167 Sum_probs=104.4
Q ss_pred EeccceeeeecCCeEEEEEEEecCCCCeEEEEECC--E---Ee-------ecCCcEEEEEe--eCcEEEEEEccccCCCC
Q psy16863 752 IEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDD--Q---QV-------VESDNVKILKE--TLGVCHLKIHALEVADQ 817 (1075)
Q Consensus 752 ~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g--~---~i-------~~~~~~~~~~~--~~~~~~L~I~~~~~~D~ 817 (1075)
...+..+.+.+|++++|.|.+.+.+ +.+.|||.+ . .+ ....|+.+..+ ..+...|.|.+++.+|+
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~ 83 (207)
T 1ypz_E 5 EQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDS 83 (207)
T ss_dssp EESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGC
T ss_pred EECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHC
Confidence 3345567799999999999998754 589999853 2 22 13456776543 14567999999999999
Q ss_pred eEEEEEEEeCCc---------eE--EEEEEEEEEecC-CCCCCeeeeecceeecCCCeEEEEEEEEcc-CC-CeeEEEEC
Q psy16863 818 AEWKCIATNDFG---------QS--ITSCFLKLNVPK-HYKKPKFLEELKAVLSEGGAVNLECKVIGV-PQ-PTLKWFKD 883 (1075)
Q Consensus 818 G~Y~C~A~N~~G---------~~--~~s~~l~V~~~~-~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~-p~-p~v~W~k~ 883 (1075)
|.|.|.+.|..| .. .....|.|.... ...+|.... . .+ .++|.|.+.|. |. |.|+|+||
T Consensus 84 G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~v~~-----~-~~-~~~l~C~~~g~~P~~~~v~W~~~ 156 (207)
T 1ypz_E 84 GTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPSVFI-----M-KN-GTNVACLVKDFYPKEVTISLRSS 156 (207)
T ss_dssp EEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCEEEE-----E-EE-TTEEEEEEEEESSSCCEEEEECS
T ss_pred EEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCCeEEE-----e-CC-CCeEEEEEeeEeCCCeEEEEecC
Confidence 999999998742 11 123567776421 112333211 1 11 27999999986 44 79999999
Q ss_pred CEEcCCC---------CeeEEEECCCCceeeEEEEEEEEeCCeeEE
Q psy16863 884 GRELKAG---------DIHKIISGEDGTCCLGIYTCEAHNCMGTTS 920 (1075)
Q Consensus 884 g~~l~~~---------~~~~i~~~~~~~~d~G~Y~C~a~N~~G~~~ 920 (1075)
.++..+ ..+.+.. .....|.|.|+|.|.|..+.+.
T Consensus 157 -~~l~~~~~~~~~~~~g~y~~~~-~~~~~~~~~ytC~v~~~~~~~~ 200 (207)
T 1ypz_E 157 -KKIVEFDPAIVISPSGKYSAVK-LGQYGDSNSVTCSVQHNSETVH 200 (207)
T ss_dssp -SEEEECCCEEEECTTSSEEEEE-CEEESSTTTCEEEEEETTEEEE
T ss_pred -CcccCCccceEEcCCCcEEEEE-eecccCCCcEEEEEEECCccEe
Confidence 666432 2233321 1111346999999999988654
No 430
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.43 E-value=6.4e-13 Score=116.68 Aligned_cols=93 Identities=22% Similarity=0.452 Sum_probs=81.6
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCC-CcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEEN-KIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
.+|.|...+....+.+|+++.|.|.+.|.|.+.|.|+|+|..+..+ .++....++..+.|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 3678888888889999999999999999999999999999998765 445566677777899999999999999999999
Q ss_pred CCCceeeEEEEEee
Q psy16863 427 AVGRSHCSCELSVL 440 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~ 440 (1075)
..|....++.|.|.
T Consensus 84 ~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 84 EYGARQCEARLEVR 97 (99)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCceeEEEEEEEE
Confidence 99998888888775
No 431
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=3e-13 Score=123.19 Aligned_cols=94 Identities=22% Similarity=0.392 Sum_probs=82.5
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeec-CCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVE-SDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
.||.|...+.+..+..|+.+.|.|.+.|.|.|.++|+|+|..+.. ..++.+.. .+ .|.|.+++.+|+|.|+|.|.
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~--~~--~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLE--NG--VLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEE--TT--EEEEESCCGGGCCCEEEEEE
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEcc--CC--EEEEccCCcCCCEEEEEEEE
Confidence 688998888899999999999999999999999999999998864 45565543 33 79999999999999999999
Q ss_pred eCCceEEEEEEEEEEecCC
Q psy16863 826 NDFGQSITSCFLKLNVPKH 844 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~~ 844 (1075)
|..|....++.|.|..++.
T Consensus 83 n~~g~~~~~~~l~V~~~~~ 101 (118)
T 2eo9_A 83 TPSGEATWSAYIEVQEFGV 101 (118)
T ss_dssp CSSCEEEEECCEEEECCSC
T ss_pred cCCCcEEEEEEEEEEeCCC
Confidence 9999999999999987653
No 432
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=7.7e-13 Score=116.72 Aligned_cols=92 Identities=22% Similarity=0.311 Sum_probs=80.6
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCC----------cEEEEEcCCEEEEEEcccCCCCc
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENK----------IYRTQHDGNFYFIDLSSVSLFDS 417 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~----------~~~~~~~g~~~~L~I~~v~~~d~ 417 (1075)
.+|.|...+.+..+.+|+.+.|.|++++ .+.++|||||++|..+. ++.+..+|..+.|.|.+++.+|+
T Consensus 7 p~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~ 84 (112)
T 2e6q_A 7 GTARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDS 84 (112)
T ss_dssp SCCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTC
T ss_pred CCcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHC
Confidence 4688999999999999999999999987 67899999999999887 89998899999999999999999
Q ss_pred eeEEEEEEeCCCceeeEEEEEeecCCC
Q psy16863 418 GRWTCLAENAVGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 418 G~Y~C~a~n~~g~~~~s~~l~V~~~~~ 444 (1075)
|.|+|..- +....++.|.|..+|.
T Consensus 85 G~Y~~~~~---~~~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 85 GALVGFSC---PGVQDSAALTIQESSG 108 (112)
T ss_dssp SEEEEEEE---TTEEEEEEEEEECSSC
T ss_pred ccEEEEEE---CCeeEEEEEEEeCCCc
Confidence 99977432 3456789999987753
No 433
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.43 E-value=1.6e-12 Score=113.42 Aligned_cols=90 Identities=18% Similarity=0.348 Sum_probs=80.5
Q ss_pred eeeecCceeeccCCeEEEEEEEecC-CCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeCCCc
Q psy16863 352 FIRRLHDIAVKVGTRARLLVEIRSP-TEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENAVGR 430 (1075)
Q Consensus 352 ~~~~~~~~~v~~G~~v~l~C~~~g~-p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~ 430 (1075)
+...+.+..+.+|+++.|.|.+.|. |.+.+.|||++..+..+.++.+...+....|.|.+++.+|+|.|+|.|.|..|.
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 83 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGE 83 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCe
Confidence 4455678899999999999999996 899999999999999888888877777888999999999999999999999999
Q ss_pred eeeEEEEEeec
Q psy16863 431 SHCSCELSVLV 441 (1075)
Q Consensus 431 ~~~s~~l~V~~ 441 (1075)
...++.|.|..
T Consensus 84 ~~~~~~l~V~~ 94 (97)
T 2bk8_A 84 DSSYAELFVKG 94 (97)
T ss_dssp EEEEEEEEETT
T ss_pred EeEEEEEEEEe
Confidence 98888887753
No 434
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.43 E-value=4e-13 Score=141.34 Aligned_cols=167 Identities=14% Similarity=0.232 Sum_probs=109.7
Q ss_pred eeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECC--E--e-c------------CCCCcEEEEEc-CCEEEEEEccc
Q psy16863 351 AFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRND--R--K-L------------EENKIYRTQHD-GNFYFIDLSSV 412 (1075)
Q Consensus 351 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g--~--~-l------------~~~~~~~~~~~-g~~~~L~I~~v 412 (1075)
.+...+..+.+.+|++++|.|.+. .+.+.+.|||+. . . + ....|+.+..+ +....|.|.++
T Consensus 5 ~v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v 83 (252)
T 1oga_E 5 GITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSA 83 (252)
T ss_dssp CEECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSC
T ss_pred cceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcC
Confidence 345556678899999999999994 457899999953 1 1 1 01245555432 33456999999
Q ss_pred CCCCceeEEEEEEeCC---CceeeEEEEEeecCC-CCCCCeeeee-cce-EEecCCeEEEEEEEECC-CCC-eEEEEeCC
Q psy16863 413 SLFDSGRWTCLAENAV---GRSHCSCELSVLVPK-AYKAPFFTKE-LEA-ILTEQGTVSLECKVMGI-PTP-QLIWYKDN 484 (1075)
Q Consensus 413 ~~~d~G~Y~C~a~n~~---g~~~~s~~l~V~~~~-~~~~p~~~~~-~~~-~~~~g~~v~l~C~~~g~-p~~-~v~W~~~g 484 (1075)
+.+|+|.|.|.+.|.. ........|.|.... ...+|.+... +.. .+.+|+.++|.|.+.|. |.+ .|+|+|||
T Consensus 84 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g 163 (252)
T 1oga_E 84 QKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNG 163 (252)
T ss_dssp CSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred ChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECC
Confidence 9999999999999862 111223456666421 1224444322 211 24478999999999985 654 99999999
Q ss_pred EeccCCC----------------EE----EEEeCCCCC-CCcEEEEEEEEeccee
Q psy16863 485 KKIKAGD----------------IF----ALTANPKDP-SSLGTYTCEAVNCMGA 518 (1075)
Q Consensus 485 ~~l~~~~----------------~~----~l~i~~~~~-~d~G~Y~C~a~n~~g~ 518 (1075)
+++..+. .+ .|.+..... +|.|.|+|.|.|....
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 164 KEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 218 (252)
T ss_dssp EEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred EECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 9875421 12 245544333 3578999999997543
No 435
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.43 E-value=7e-13 Score=139.60 Aligned_cols=182 Identities=12% Similarity=0.140 Sum_probs=112.2
Q ss_pred ccccceeeccceeEEEEEecCCCc--eEEEE-ecCCCeeeEEecCCCcccc----CC-CeEEEeeCCeEEEEEcccCCCC
Q psy16863 248 RLHDIAVKVGTRARLLVEIRSPTE--IKCQF-DLNNTIPFSFRAQGDHPIF----GN-RFRAINRDGRTELNIRRVRRDD 319 (1075)
Q Consensus 248 ~~~~~~v~~g~~~~l~c~~~~~~~--~~c~~-~~~~~~~~~w~~~~~~~~~----~~-~~~~~~~~~~~~L~I~~~~~~d 319 (1075)
.+..+.+.+|+.++|.|....... +.|.- ..+....+..+..++.... .+ ++.+...+... |+|.+++.+|
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~D 85 (253)
T 3to4_D 7 NPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMSQ 85 (253)
T ss_dssp ECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCSS
T ss_pred CCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChhh
Confidence 355678899999999998654322 22211 1111222222222211111 12 66665544443 9999999999
Q ss_pred CEEEEEEEEeCCe------eEEEEEEEEEecC--CCCCCeeee-ecCceeeccCCeEEEEEEEec-CCCc-EEEEEECCE
Q psy16863 320 GGRYSVTASNESG------YSTAKFELSVESQ--VPDAPAFIR-RLHDIAVKVGTRARLLVEIRS-PTEI-KIHWYRNDR 388 (1075)
Q Consensus 320 ~G~Y~C~a~n~~g------~~~~~~~l~V~~~--~~~~p~~~~-~~~~~~v~~G~~v~l~C~~~g-~p~~-~v~W~k~g~ 388 (1075)
+|.|.|.+.+..+ .......|.|... ...+|.+.. .+....+..|+.++|.|.+.| .|.+ .|+|+|||.
T Consensus 86 sG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~ 165 (253)
T 3to4_D 86 GRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGK 165 (253)
T ss_dssp CEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred CeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCE
Confidence 9999999987543 2223346666531 224565543 334445566899999999988 5655 999999999
Q ss_pred ecCCCCcEEE---E-----EcCCE---EEEEEcccCCCC-ceeEEEEEEeCCCc
Q psy16863 389 KLEENKIYRT---Q-----HDGNF---YFIDLSSVSLFD-SGRWTCLAENAVGR 430 (1075)
Q Consensus 389 ~l~~~~~~~~---~-----~~g~~---~~L~I~~v~~~d-~G~Y~C~a~n~~g~ 430 (1075)
.+........ . .++.. ..|.|.....+| .|.|+|.|.|....
T Consensus 166 ~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~l~ 219 (253)
T 3to4_D 166 EVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (253)
T ss_dssp EECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred ECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCCCC
Confidence 9865432111 0 23433 367888877777 67999999997543
No 436
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=6.7e-13 Score=117.11 Aligned_cols=91 Identities=16% Similarity=0.263 Sum_probs=77.6
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCC----------cEEEEEeeCcEEEEEEccccCCC
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESD----------NVKILKETLGVCHLKIHALEVAD 816 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~----------~~~~~~~~~~~~~L~I~~~~~~D 816 (1075)
.+|.|+..+++..+.+|+.+.|+|.+++ .|.++|||||++|..+. ++.+..+ ...++|+|.+++.+|
T Consensus 7 p~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~-g~~~~L~I~~v~~~D 83 (112)
T 2e6q_A 7 GTARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQK-GLQHRLILHAVKHQD 83 (112)
T ss_dssp SCCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCB-TTEEEEEEESCCSTT
T ss_pred CCcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeC-CcEEEEEECCCCHHH
Confidence 4688999999999999999999999997 77899999999999887 7777543 357899999999999
Q ss_pred CeEEEEEEEeCCceEEEEEEEEEEecC
Q psy16863 817 QAEWKCIATNDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 817 ~G~Y~C~A~N~~G~~~~s~~l~V~~~~ 843 (1075)
+|.|+|...+ ...+++.|.|+.+|
T Consensus 84 ~G~Y~~~~~~---~~~ssA~L~V~~~p 107 (112)
T 2e6q_A 84 SGALVGFSCP---GVQDSAALTIQESS 107 (112)
T ss_dssp CSEEEEEEET---TEEEEEEEEEECSS
T ss_pred CccEEEEEEC---CeeEEEEEEEeCCC
Confidence 9999774433 45678999999765
No 437
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=2.7e-13 Score=119.76 Aligned_cols=93 Identities=13% Similarity=0.078 Sum_probs=80.8
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCC-CeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPE-PKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~-p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
.||.|+..+++..+.+|++++|.|.+.+.|. +.+.|||||.+|..+.++.+..+ ...+.|.|.+++.+|+|.|+|.|.
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~ 85 (104)
T 2eny_A 7 GHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQ-GRKYILVVREAAPSDAGEVVFSVR 85 (104)
T ss_dssp CCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEE-TTEEEEEECSCCTTTCSCEEEEET
T ss_pred CCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEc-CCEEEEEECCCCHHHCEEEEEEEC
Confidence 5778888999999999999999999998875 48999999999998888887654 357799999999999999999994
Q ss_pred eCCceEEEEEEEEEEecCC
Q psy16863 826 NDFGQSITSCFLKLNVPKH 844 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~~ 844 (1075)
....++.|.|..+|.
T Consensus 86 ----~~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 86 ----GLTSKASLIVRERSG 100 (104)
T ss_dssp ----TEEEEECEEEECCCS
T ss_pred ----CeeEEEEEEEeCCCc
Confidence 456789999987653
No 438
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.42 E-value=1.1e-13 Score=121.76 Aligned_cols=93 Identities=15% Similarity=0.363 Sum_probs=73.6
Q ss_pred CCCeEEecc----ceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEE
Q psy16863 747 KAPKFIEGL----KSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKC 822 (1075)
Q Consensus 747 ~~p~~~~~~----~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 822 (1075)
.||.|+..+ ....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+..+.++.......+...|.|.+++.+|+|.|+|
T Consensus 3 ~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 82 (100)
T 3caf_A 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC 82 (100)
T ss_dssp EEEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEE
Confidence 366666543 3567889999999999999999999999999998765442211111223479999999999999999
Q ss_pred EEEeCCceEEEEEEEEE
Q psy16863 823 IATNDFGQSITSCFLKL 839 (1075)
Q Consensus 823 ~A~N~~G~~~~s~~l~V 839 (1075)
.|.|..|....++.|.|
T Consensus 83 ~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 83 VVENEYGSINHTYHLDV 99 (100)
T ss_dssp EEEETTEEEEEEEEEEE
T ss_pred EEEeCCCEEEEEEEEEE
Confidence 99999999888887776
No 439
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=3.8e-13 Score=118.79 Aligned_cols=93 Identities=12% Similarity=0.183 Sum_probs=82.7
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCC-cEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTE-IKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~-~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
.+|.|...+.+..+.+|+.++|.|.+.+.|. +.+.|||||..|..+.++.+..++..+.|.|.++..+|+|.|+|.|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a-- 84 (104)
T 2eny_A 7 GHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSV-- 84 (104)
T ss_dssp CCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEE--
T ss_pred CCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEE--
Confidence 4678888899999999999999999988764 4899999999999888999988999999999999999999999998
Q ss_pred CCCceeeEEEEEeecCCC
Q psy16863 427 AVGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~~~~~ 444 (1075)
+....++.|.|..+|.
T Consensus 85 --~~~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 85 --RGLTSKASLIVRERSG 100 (104)
T ss_dssp --TTEEEEECEEEECCCS
T ss_pred --CCeeEEEEEEEeCCCc
Confidence 4566788899987764
No 440
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.41 E-value=1e-12 Score=115.71 Aligned_cols=93 Identities=15% Similarity=0.260 Sum_probs=82.3
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecC--CCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEE
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLE--ENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~--~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
.||.|...+....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+. ...++.+..++....|.|.++..+|+|.|+|.|.
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 46777777788899999999999999999999999999999986 4567888888888899999999999999999999
Q ss_pred eCCCceeeEEEEEee
Q psy16863 426 NAVGRSHCSCELSVL 440 (1075)
Q Consensus 426 n~~g~~~~s~~l~V~ 440 (1075)
|..|....++.|.|.
T Consensus 84 n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 84 NEFGSDSATVNIHIR 98 (100)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEEEE
Confidence 999998877777764
No 441
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.41 E-value=8.8e-13 Score=116.01 Aligned_cols=95 Identities=20% Similarity=0.430 Sum_probs=80.8
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcE-EEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIY-RTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~-~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
.+|.|...+....+.+|++++|.|.+.|.|.+.|.|+|+|..+....+. .....+..+.|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 3677877788899999999999999999999999999999998776532 233455567899999999999999999999
Q ss_pred CCCceeeEEEEEeecC
Q psy16863 427 AVGRSHCSCELSVLVP 442 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~~~ 442 (1075)
..|....++.|.|...
T Consensus 84 ~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 84 RAGEATFTVQLDVLAK 99 (100)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEec
Confidence 9999888888888653
No 442
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.41 E-value=1.4e-12 Score=114.55 Aligned_cols=91 Identities=20% Similarity=0.294 Sum_probs=80.1
Q ss_pred CCCeEEeccce-eeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 747 KAPKFIEGLKS-CQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 747 ~~p~~~~~~~~-~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
.+|.|+..+.+ ..+.+|+++.|.|.+. .|.|.+.|||+|..+..+.++.+... .....|.|.+++.+|+|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a- 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHK-GCQRILFINNCQMTDDSEYYVTA- 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEE-TTEEEEEEEEECTTTCCEEEEEE-
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEec-CCEEEEEEcCCCcCcCEEEEEEE-
Confidence 58999988887 6788999999999999 79999999999999988888888644 44678999999999999999999
Q ss_pred eCCceEEEEEEEEEEecC
Q psy16863 826 NDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~ 843 (1075)
|....++.|.|..+|
T Consensus 83 ---g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 ---GDEKCSTELFVRSGP 97 (100)
T ss_dssp ---TTEEEEEEEEECCSC
T ss_pred ---CCceEEEEEEEecCC
Confidence 777888889888654
No 443
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.41 E-value=1.3e-12 Score=136.38 Aligned_cols=171 Identities=16% Similarity=0.238 Sum_probs=111.0
Q ss_pred eecCceeeccCCeEEEEEEEecC--CCcEEEEEECC--E---ec--------------CCCCcEEEEEc--CCEEEEEEc
Q psy16863 354 RRLHDIAVKVGTRARLLVEIRSP--TEIKIHWYRND--R---KL--------------EENKIYRTQHD--GNFYFIDLS 410 (1075)
Q Consensus 354 ~~~~~~~v~~G~~v~l~C~~~g~--p~~~v~W~k~g--~---~l--------------~~~~~~~~~~~--g~~~~L~I~ 410 (1075)
..+..+.+.+|++++|.|.+.+. +...+.|||.. . .+ ....|+.+..+ .....|+|.
T Consensus 4 ~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 83 (248)
T 3u2s_H 4 VESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMN 83 (248)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred ecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEEC
Confidence 34567789999999999999762 35689999842 1 11 01246665543 456789999
Q ss_pred ccCCCCceeEEEEEEeCCC----------------------ceeeEEEEEeecCCCCCCCeee-eecceEEecCCeEEEE
Q psy16863 411 SVSLFDSGRWTCLAENAVG----------------------RSHCSCELSVLVPKAYKAPFFT-KELEAILTEQGTVSLE 467 (1075)
Q Consensus 411 ~v~~~d~G~Y~C~a~n~~g----------------------~~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~v~l~ 467 (1075)
+++.+|+|.|.|.+.+..+ .......|.|...+. .+|.+. ..+...+..|+.++|.
T Consensus 84 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~-~~P~v~~~~~~~~~~~g~~~~L~ 162 (248)
T 3u2s_H 84 SLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSAST-KGPSVFPLAPSSKSTSGGTAALG 162 (248)
T ss_dssp SCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCC-BCCEEEEECCC------CEEEEE
T ss_pred CCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCC-CCCEEEEeCCCccccCCCcEEEE
Confidence 9999999999999987421 112234566653222 234443 3333335578999999
Q ss_pred EEEEC-CC-CCeEEEEeCCEecc---------CCCEE----EEEeCCCCCCCcEEEEEEEEecceeeEEEEEEE
Q psy16863 468 CKVMG-IP-TPQLIWYKDNKKIK---------AGDIF----ALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVI 526 (1075)
Q Consensus 468 C~~~g-~p-~~~v~W~~~g~~l~---------~~~~~----~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~ 526 (1075)
|.+.+ .| ...++|+++|..+. .+..+ .|.+......| |.|+|.|.|..+.......+.
T Consensus 163 C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 235 (248)
T 3u2s_H 163 CLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 235 (248)
T ss_dssp EEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECC
T ss_pred EEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEc
Confidence 99997 45 34899999987431 12222 46677777777 999999999987665554443
No 444
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=9e-13 Score=118.25 Aligned_cols=98 Identities=22% Similarity=0.418 Sum_probs=84.9
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCC-CCcEEEEEc-CCEEEEEEcccCCCCceeEEEEE
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEE-NKIYRTQHD-GNFYFIDLSSVSLFDSGRWTCLA 424 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~-~~~~~~~~~-g~~~~L~I~~v~~~d~G~Y~C~a 424 (1075)
..+|.|...+....+.+|+.+.|.|.+.|.|.+.|.|+|+|..+.. ..++.+..+ +..+.|.|.+++.+|+|.|+|.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 3578888888899999999999999999999999999999999875 566666654 45568999999999999999999
Q ss_pred EeCCCceeeEEEEEeecCCC
Q psy16863 425 ENAVGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 425 ~n~~g~~~~s~~l~V~~~~~ 444 (1075)
.|..|....++.|.|..++.
T Consensus 86 ~N~~g~~~~~~~l~V~~~~~ 105 (110)
T 2dm2_A 86 ANPQGRISCTGRLMVQAVNS 105 (110)
T ss_dssp ECTTCCEEECCCEEEECCSC
T ss_pred EECCCeEEEEEEEEEECCCC
Confidence 99999998888888887653
No 445
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.41 E-value=5.1e-13 Score=120.55 Aligned_cols=90 Identities=24% Similarity=0.452 Sum_probs=78.9
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.||.|...+.+..+.+|+++.|.|.+.+. |.++|+|+|..+..+.++.+..+ ...+.|.|.+++.+|+|.|+|.|
T Consensus 18 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a-- 92 (113)
T 2edh_A 18 LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQD-GARCELQIRGLVAEDAGEYLCMC-- 92 (113)
T ss_dssp SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEE-TTEEEEEECSCCSTTCEEEEEEE--
T ss_pred CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEEC-CCEEEEEECCCChhhCEEEEEEe--
Confidence 46799888899999999999999999875 78999999999998888888754 45678999999999999999999
Q ss_pred CCceEEEEEEEEEEecC
Q psy16863 827 DFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~~~ 843 (1075)
|....++.|.|..+|
T Consensus 93 --~~~~~~~~l~V~~~p 107 (113)
T 2edh_A 93 --GKERTSAMLTVRAMP 107 (113)
T ss_dssp --TTEEEEEEEEECCCC
T ss_pred --CCCCEEEEEEEeCCC
Confidence 777888889988654
No 446
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.41 E-value=1.1e-12 Score=116.03 Aligned_cols=90 Identities=21% Similarity=0.321 Sum_probs=77.0
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCC--cEEEEEeeCcEEEEEEccccCCCCeEEEEEEE
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESD--NVKILKETLGVCHLKIHALEVADQAEWKCIAT 825 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~--~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~ 825 (1075)
|+.|...+.+..+.+|+++.|.|.+.+ |.+.+.|+|+|..+..+. ++.+... .....|.|.+++.+|+|.|+|.|.
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a~ 84 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVE-GKKHILIIEGATKADAAEYSVMTT 84 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEE-TTEEEEEEEEECTTTCSEEEEEET
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEc-CCEEEEEECCCCcccCEEEEEEEC
Confidence 445888888999999999999999987 779999999999998887 6677644 346789999999999999999998
Q ss_pred eCCceEEEEEEEEEEecC
Q psy16863 826 NDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 826 N~~G~~~~s~~l~V~~~~ 843 (1075)
| ...++.|.|..++
T Consensus 85 n----~~~~~~l~V~~~p 98 (103)
T 1x44_A 85 G----GQSSAKLSVDLKS 98 (103)
T ss_dssp T----EEEEEEEEEECCC
T ss_pred C----CcEEEEEEEeCCC
Confidence 8 4667888888764
No 447
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.40 E-value=3.3e-13 Score=119.77 Aligned_cols=94 Identities=18% Similarity=0.297 Sum_probs=85.6
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
..+|.|...+.+..+.+|+++.|.|.+.|.|.+.|.|+|+|..+..+.++.+...+....|.|.++..+|+|.|+|.|.|
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 91 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVEN 91 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBC
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEe
Confidence 35788888999999999999999999999999999999999999888888888777778999999999999999999999
Q ss_pred CCCceeeEEEEEee
Q psy16863 427 AVGRSHCSCELSVL 440 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~ 440 (1075)
..|....++.|.|.
T Consensus 92 ~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 92 SEGKQEAEFTLTIQ 105 (106)
T ss_dssp SSCBCCEEEEEEEC
T ss_pred CCCeEEEEEEEEEE
Confidence 99998888877774
No 448
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.40 E-value=4.3e-13 Score=124.49 Aligned_cols=85 Identities=14% Similarity=0.259 Sum_probs=72.2
Q ss_pred cceeeeecCCeEEEEEEEecCCCCeEEEEECC----------------------------EEe-ecCCcEEEEEeeCcEE
Q psy16863 755 LKSCQATVNEEFKFTVQVSISPEPKVSWFRDD----------------------------QQV-VESDNVKILKETLGVC 805 (1075)
Q Consensus 755 ~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g----------------------------~~i-~~~~~~~~~~~~~~~~ 805 (1075)
+.++.+.+|+++.|.|.+.|.|.|.|+|+|+| ..+ ....++.+... ...+
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~-~~~s 103 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETT-KDRS 103 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEE-TTEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeC-CCEE
Confidence 45678999999999999999999999999999 555 34556666543 3467
Q ss_pred EEEEccccCCCCeEEEEEEEeCCceEEEEEEEEEE
Q psy16863 806 HLKIHALEVADQAEWKCIATNDFGQSITSCFLKLN 840 (1075)
Q Consensus 806 ~L~I~~~~~~D~G~Y~C~A~N~~G~~~~s~~l~V~ 840 (1075)
.|.|.+++.+|+|.|+|.|.|.+|.+..++.|.|.
T Consensus 104 ~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 104 IFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 89999999999999999999999999888887764
No 449
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=6.5e-14 Score=126.78 Aligned_cols=94 Identities=19% Similarity=0.254 Sum_probs=81.5
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.++.|...+.+..+.+|+++.|.|.+.|.|.|.++|+|||..+..+.++.+.....+.+.|.|.+++.+|+|.|+|.|
T Consensus 12 ~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~-- 89 (115)
T 2cr6_A 12 RRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA-- 89 (115)
T ss_dssp SCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE--
T ss_pred CCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE--
Confidence 456888899999999999999999999999999999999999998887776533345668999999999999999994
Q ss_pred CCceEEEEEEEEEEecCC
Q psy16863 827 DFGQSITSCFLKLNVPKH 844 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~~~~ 844 (1075)
|....++.|.|..+|.
T Consensus 90 --g~~~~~~~L~V~~~p~ 105 (115)
T 2cr6_A 90 --GDQRASAALRVTEKPS 105 (115)
T ss_dssp --TTEECCEEEEEECCSS
T ss_pred --CCeeEEEEEEEECCCc
Confidence 7778889999987654
No 450
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.40 E-value=6.3e-12 Score=130.05 Aligned_cols=188 Identities=13% Similarity=0.139 Sum_probs=119.8
Q ss_pred ccceeeccceeEEEEEecCC----CceEEEEe-cCCCeeeEE-ecC-CCc----cccCCCeEEEeeC--CeEEEEEcccC
Q psy16863 250 HDIAVKVGTRARLLVEIRSP----TEIKCQFD-LNNTIPFSF-RAQ-GDH----PIFGNRFRAINRD--GRTELNIRRVR 316 (1075)
Q Consensus 250 ~~~~v~~g~~~~l~c~~~~~----~~~~c~~~-~~~~~~~~w-~~~-~~~----~~~~~~~~~~~~~--~~~~L~I~~~~ 316 (1075)
..+.+.+|+.++|.|.+... ..+.|.-. .+....+.. +.. +.. .....|+.+..+. +...|+|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (230)
T 3n9g_H 8 GAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLR 87 (230)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCC
Confidence 34668899999999998642 22333211 112222221 111 111 1124577776543 56789999999
Q ss_pred CCCCEEEEEEEEeCC-----e---eEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEec-CC-CcEEEEEEC
Q psy16863 317 RDDGGRYSVTASNES-----G---YSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRS-PT-EIKIHWYRN 386 (1075)
Q Consensus 317 ~~d~G~Y~C~a~n~~-----g---~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g-~p-~~~v~W~k~ 386 (1075)
.+|+|.|.|.+.+.. + .....+.|.|......+|.+........+.+|+.++|.|.+.+ .| .+.+.| +
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W--~ 165 (230)
T 3n9g_H 88 SEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--N 165 (230)
T ss_dssp GGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEE--G
T ss_pred hhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEE--C
Confidence 999999999998753 1 1223456777654556677765455556679999999999977 44 568999 6
Q ss_pred CEecCCCCc---EEEEEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEee
Q psy16863 387 DRKLEENKI---YRTQHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVL 440 (1075)
Q Consensus 387 g~~l~~~~~---~~~~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~ 440 (1075)
|..+..... .....++.. ..|.|.....+| |.|+|.|.|..+.......+.|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 166 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp GGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCC
T ss_pred CcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCC
Confidence 665543211 111122322 368899999999 99999999998776655555554
No 451
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.39 E-value=8.3e-13 Score=119.11 Aligned_cols=104 Identities=18% Similarity=0.324 Sum_probs=88.8
Q ss_pred eeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcc
Q psy16863 332 GYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSS 411 (1075)
Q Consensus 332 g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~ 411 (1075)
|..+..+.|.|.. .||.|...+.+..+.+|+++.|.|.+.+. +.++|||+|..+..+.++.+..++..+.|.|.+
T Consensus 5 g~~~~~~~l~V~~---~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~ 79 (113)
T 2edh_A 5 SSGRTSAMLTVRA---LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRG 79 (113)
T ss_dssp CCCCCCCCCCCCC---SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECS
T ss_pred CCCcEEEEEEEEc---CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECC
Confidence 3445556676664 46788888889999999999999999765 689999999999988999999899888999999
Q ss_pred cCCCCceeEEEEEEeCCCceeeEEEEEeecCCC
Q psy16863 412 VSLFDSGRWTCLAENAVGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 412 v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~~~~~ 444 (1075)
+..+|+|.|+|.| |....++.|.|..+|.
T Consensus 80 v~~~D~G~Y~C~a----~~~~~~~~l~V~~~p~ 108 (113)
T 2edh_A 80 LVAEDAGEYLCMC----GKERTSAMLTVRAMPS 108 (113)
T ss_dssp CCSTTCEEEEEEE----TTEEEEEEEEECCCCC
T ss_pred CChhhCEEEEEEe----CCCCEEEEEEEeCCCC
Confidence 9999999999999 7778888899987653
No 452
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=1.8e-12 Score=117.87 Aligned_cols=95 Identities=13% Similarity=0.168 Sum_probs=81.3
Q ss_pred CCCeeee---ecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEE
Q psy16863 348 DAPAFIR---RLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLA 424 (1075)
Q Consensus 348 ~~p~~~~---~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a 424 (1075)
.+|.|.. ......+.+|+.+.|.|.+.|.|.+.|.|+|+|..+. ..++.+...+....|.|.++..+|+|.|+|.|
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 98 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSV 98 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEEE
Confidence 3666643 2467889999999999999999999999999999997 45666667777788999999999999999999
Q ss_pred EeCCCceeeEEEEEeecCC
Q psy16863 425 ENAVGRSHCSCELSVLVPK 443 (1075)
Q Consensus 425 ~n~~g~~~~s~~l~V~~~~ 443 (1075)
.|..|....++.|.|..+|
T Consensus 99 ~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 99 QIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp ECSSCEECCEEEEEEECCC
T ss_pred EeCCCeEEEEEEEEEEcCC
Confidence 9999998888888887654
No 453
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.39 E-value=3.8e-14 Score=130.00 Aligned_cols=97 Identities=21% Similarity=0.282 Sum_probs=81.7
Q ss_pred CCCCeEEeccceeeeecCCeEEEEEEEecCCCCe-EEEEECCEEeec--CCcEEEEEe-eCc--EEEEEEccccCCCC-e
Q psy16863 746 NKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPK-VSWFRDDQQVVE--SDNVKILKE-TLG--VCHLKIHALEVADQ-A 818 (1075)
Q Consensus 746 ~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~-v~W~k~g~~i~~--~~~~~~~~~-~~~--~~~L~I~~~~~~D~-G 818 (1075)
..||.|.. +....+.+|+.+.|.|.+.|.|.|. |+|+|++..+.. ..++.+... ..+ ...|.|.+++.+|. |
T Consensus 12 ~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G 90 (122)
T 2cry_A 12 NGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQT 90 (122)
T ss_dssp CSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHS
T ss_pred ecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCc
Confidence 36888888 7788899999999999999999997 999999999875 467766422 222 56899999999999 9
Q ss_pred EEEEEEEeCCceEEEEEEEEEEecC
Q psy16863 819 EWKCIATNDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 819 ~Y~C~A~N~~G~~~~s~~l~V~~~~ 843 (1075)
.|+|.|.|.+|.+..++.|.|..++
T Consensus 91 ~Y~C~a~N~~G~~~~~~~l~V~~~~ 115 (122)
T 2cry_A 91 IYNCTAWNSFGSDTEIIRLKEQGSE 115 (122)
T ss_dssp CEEEEEECSSCEEEEEECCCCSCSS
T ss_pred eEEEEEECCCCeEEEEEEEEECCCC
Confidence 9999999999999888888877543
No 454
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=1.5e-12 Score=114.41 Aligned_cols=93 Identities=18% Similarity=0.325 Sum_probs=79.9
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCC-CCcEEEEEcCCEEEEEEcccCCCCceeEEEEEE
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEE-NKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~-~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
..+|.|...+....+.+|+++.|.|.+.|.|.+.|.|+|+|..+.. ..++.+..++ .|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~ 82 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQG---TLQIKNLRISDTGTYTCVAT 82 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTC---CEEEESCCTTTCCEEEEEEE
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCC---EEEEccCCcccCEEEEEEEE
Confidence 4588898888899999999999999999999999999999998873 4454444444 48999999999999999999
Q ss_pred eCCCceeeEEEEEeecC
Q psy16863 426 NAVGRSHCSCELSVLVP 442 (1075)
Q Consensus 426 n~~g~~~~s~~l~V~~~ 442 (1075)
|..|....++.|.|..+
T Consensus 83 n~~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 83 SSSGETSWSAVLDVTES 99 (100)
T ss_dssp CSSCCCBCCEEEEEESC
T ss_pred cCCCCEEEEEEEEEecC
Confidence 99999988888888754
No 455
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.38 E-value=2.7e-12 Score=112.75 Aligned_cols=91 Identities=25% Similarity=0.489 Sum_probs=81.9
Q ss_pred CCCeeeeecCc-eeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 348 DAPAFIRRLHD-IAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 348 ~~p~~~~~~~~-~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
.+|.|...+.+ ..+.+|++++|.|.+. .|.+.+.|||||..+..+.++.+..++..+.|.|.++..+|+|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a-- 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA-- 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE--
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE--
Confidence 47888888876 6889999999999997 6889999999999998888999988998889999999999999999999
Q ss_pred CCCceeeEEEEEeecCC
Q psy16863 427 AVGRSHCSCELSVLVPK 443 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~~~~ 443 (1075)
|....++.|.|..+|
T Consensus 83 --g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 --GDEKCSTELFVRSGP 97 (100)
T ss_dssp --TTEEEEEEEEECCSC
T ss_pred --CCceEEEEEEEecCC
Confidence 777888889888765
No 456
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.38 E-value=1.8e-12 Score=136.75 Aligned_cols=167 Identities=16% Similarity=0.234 Sum_probs=105.3
Q ss_pred eeeeecCCeEEEEEEEecCC--CCeEEEEECC--E---Ee-------------ecCCcEEEEEee-CcEEEEEEccccCC
Q psy16863 757 SCQATVNEEFKFTVQVSISP--EPKVSWFRDD--Q---QV-------------VESDNVKILKET-LGVCHLKIHALEVA 815 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v~g~p--~p~v~W~k~g--~---~i-------------~~~~~~~~~~~~-~~~~~L~I~~~~~~ 815 (1075)
...+.+|++++|.|.+.+.+ ...+.|||.. . .+ ....|+.+..+. .+.+.|.|.+++.+
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 88 (263)
T 3iu4_H 9 PGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTD 88 (263)
T ss_dssp CSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGG
T ss_pred CEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHH
Confidence 35688999999999998643 5689999842 1 11 013566665443 35788999999999
Q ss_pred CCeEEEEEEEeCCc------eEE--EEEEEEEEecCCCCCCeee-eecceeecCCCeEEEEEEEEccCC--CeeEEEECC
Q psy16863 816 DQAEWKCIATNDFG------QSI--TSCFLKLNVPKHYKKPKFL-EELKAVLSEGGAVNLECKVIGVPQ--PTLKWFKDG 884 (1075)
Q Consensus 816 D~G~Y~C~A~N~~G------~~~--~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~~~L~C~v~g~p~--p~v~W~k~g 884 (1075)
|+|.|.|.+.|..+ ... ....|.|...+ ..+|.+. ......+.+|+.++|.|.+.|.++ +.|+| +|
T Consensus 89 DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~-~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W--~~ 165 (263)
T 3iu4_H 89 DTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAAS-TKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW--NS 165 (263)
T ss_dssp GCEEEEEEEEECC---CEEEEEEECCCEEEEECSSC-CBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE--GG
T ss_pred HCEEEEEEEEeCCCCccccccceeCCceEEEEeccc-CCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE--CC
Confidence 99999999998641 111 12355664322 2344443 222223457899999999998643 67999 55
Q ss_pred EEcCC-----------CCee----EEEECCCCceeeEEEEEEEEeCCeeEEEEEEEEE
Q psy16863 885 RELKA-----------GDIH----KIISGEDGTCCLGIYTCEAHNCMGTTSSSAALLG 927 (1075)
Q Consensus 885 ~~l~~-----------~~~~----~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 927 (1075)
..+.. +..+ .|.+......| |.|+|.|.|..+.......+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~~ 222 (263)
T 3iu4_H 166 GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 222 (263)
T ss_dssp GTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEECCC
T ss_pred cccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEEcC
Confidence 44321 1111 23344444457 9999999999988766665554
No 457
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=1e-12 Score=116.22 Aligned_cols=91 Identities=18% Similarity=0.321 Sum_probs=79.8
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.||.|...+.+..+.+|+++.|.|.+.+ |.+.+.|+|+|..+..+.++.+...+ ..+.|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEG-TMAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEET-TEEEEEESSCCTTTCSEEEEECSS
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECC-CEEEEEECCCCcccCEEEEEEEcc
Confidence 5889999999999999999999999997 88899999999999888888877544 477899999999999999999999
Q ss_pred CCceEEEEEEEEEEecC
Q psy16863 827 DFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~~~ 843 (1075)
...++.|.|..++
T Consensus 85 ----~~~~~~l~V~~~p 97 (103)
T 2edf_A 85 ----SKSTASLHVEEKA 97 (103)
T ss_dssp ----CEEEEEEEECCCS
T ss_pred ----CCcEEEEEEeCCC
Confidence 3567788887654
No 458
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.38 E-value=2.3e-12 Score=115.21 Aligned_cols=96 Identities=7% Similarity=0.194 Sum_probs=79.3
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCE-Eee-------cCCcEEEEEeeCcEEEEEEccccCCCCe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQ-QVV-------ESDNVKILKETLGVCHLKIHALEVADQA 818 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~-~i~-------~~~~~~~~~~~~~~~~L~I~~~~~~D~G 818 (1075)
.+|.|...+.+..+.+|+++.|.|.+.+.|.+.+.|+|++. .+. ...++.+.....+...|.|.+++.+|+|
T Consensus 5 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G 84 (108)
T 3m45_A 5 GSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEG 84 (108)
T ss_dssp ---CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCE
T ss_pred cCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCe
Confidence 46778888889999999999999999999999999999876 332 2347776655556789999999999999
Q ss_pred EEEEEEEeCCceEEEEEEEEEEecC
Q psy16863 819 EWKCIATNDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 819 ~Y~C~A~N~~G~~~~s~~l~V~~~~ 843 (1075)
.|+|.|.| .|....++.|.|..+|
T Consensus 85 ~Y~C~~~n-~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 85 QYTCSLFT-MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp EEEEEECS-SSCEEEEEEEEEECCC
T ss_pred EEEEEEEc-CCCcEEEEEEEEEcCC
Confidence 99999999 8988889999988653
No 459
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.37 E-value=1.6e-11 Score=118.96 Aligned_cols=148 Identities=17% Similarity=0.167 Sum_probs=98.5
Q ss_pred ceeeeecCCeEEEEEEEecCCCCe-EEEEEC-CEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEE
Q psy16863 756 KSCQATVNEEFKFTVQVSISPEPK-VSWFRD-DQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSIT 833 (1075)
Q Consensus 756 ~~~~~~~g~~~~l~C~v~g~p~p~-v~W~k~-g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~ 833 (1075)
++..|..|+++.|.|.+. .+.|. +.|.-- ++.+. ...+.+...|.|.+++. | |.|.|.+.+.......
T Consensus 7 ~~~~V~~G~Sv~l~Cs~~-c~~p~~~~~~t~l~~~~~-------~~~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~~~~ 76 (185)
T 1iam_A 7 SKVILPRGGSVLVTCSTS-CDQPKLLGIETPLPKKEL-------LLPGNNRKVYELSNVQE-D-SQPMCYSNCPDGQSTA 76 (185)
T ss_dssp SEEEEETTEEEEEEEEEC-SSSCSEEEEECSSCEEEE-------CSSSSSEEEEEEEEECS-C-BCCEEEEECSSCEEEE
T ss_pred CCcEEeCCCCEEEEEEcc-CCCCccceEEeeCCCccE-------eccCCceeEEEEEecCc-C-CEEEEEEECCCCceEE
Confidence 445689999999999997 46665 666421 11111 01123445789999984 4 9999999776555666
Q ss_pred EEEEEEEecCCCCCCeeeeecceeecCCCeEEEEEEEEccCCC---eeEEEECCEEcCC------CCeeEEEECCCCcee
Q psy16863 834 SCFLKLNVPKHYKKPKFLEELKAVLSEGGAVNLECKVIGVPQP---TLKWFKDGRELKA------GDIHKIISGEDGTCC 904 (1075)
Q Consensus 834 s~~l~V~~~~~~~~p~~~~~~~~~~~~g~~~~L~C~v~g~p~p---~v~W~k~g~~l~~------~~~~~i~~~~~~~~d 904 (1075)
++.|.|..+|.. +. +......+.+|+.++|.|.+.|..++ +|+|||++++|.. .....+.+. ....|
T Consensus 77 ~~~l~V~~~P~~--v~-i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~~~~~~~~tl~~~-~~reD 152 (185)
T 1iam_A 77 KTFLTVYWTPER--VE-LAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGEPAEVTTTVL-VRRDH 152 (185)
T ss_dssp ECEEEEEBCCSE--EE-ECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEE-CCSSC
T ss_pred EEEEEEeCCCCC--CE-EccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccCCCccccEEEEEe-ceecc
Confidence 777888765432 22 22223347899999999999985443 4899999999863 112233333 33345
Q ss_pred eE-EEEEEEEeCCe
Q psy16863 905 LG-IYTCEAHNCMG 917 (1075)
Q Consensus 905 ~G-~Y~C~a~N~~G 917 (1075)
.| .|+|+|.|.+|
T Consensus 153 ~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 153 HGAQFSCRTELDLR 166 (185)
T ss_dssp SSCEEEEEEEEECG
T ss_pred CCCeEEEEEEecCc
Confidence 55 99999999876
No 460
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=2.1e-12 Score=114.17 Aligned_cols=91 Identities=18% Similarity=0.383 Sum_probs=79.4
Q ss_pred CCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCC--cEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 349 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENK--IYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 349 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~--~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
|+.|...+.++.+.+|++++|.|.+.+ |.+.|.|||+|..+..+. ++.+..++....|.|.++..+|+|.|+|.|.|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 445888888999999999999999977 669999999999998877 77888888888999999999999999999977
Q ss_pred CCCceeeEEEEEeecCCC
Q psy16863 427 AVGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~~~~~ 444 (1075)
...++.|.|..++.
T Consensus 86 ----~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 86 ----GQSSAKLSVDLKSG 99 (103)
T ss_dssp ----EEEEEEEEEECCCS
T ss_pred ----CcEEEEEEEeCCCC
Confidence 46678888887653
No 461
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=1.8e-12 Score=114.65 Aligned_cols=92 Identities=24% Similarity=0.448 Sum_probs=82.1
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.||.|...+.+..+.+|++++|.|.+.+ |.+.|.|+|+|..+..+.++.+..++..+.|.|.++..+|+|.|+|.|.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n- 84 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA- 84 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS-
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc-
Confidence 5788888889999999999999999987 77899999999999888899998899888999999999999999999988
Q ss_pred CCceeeEEEEEeecCCC
Q psy16863 428 VGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 428 ~g~~~~s~~l~V~~~~~ 444 (1075)
...++.|.|..+|.
T Consensus 85 ---~~~~~~l~V~~~p~ 98 (103)
T 2edf_A 85 ---SKSTASLHVEEKAS 98 (103)
T ss_dssp ---CEEEEEEEECCCSS
T ss_pred ---CCcEEEEEEeCCCC
Confidence 35677888877654
No 462
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.37 E-value=2.4e-12 Score=135.67 Aligned_cols=163 Identities=15% Similarity=0.241 Sum_probs=104.7
Q ss_pred CceeeccCCeEEEEEEEecCC--CcEEEEEECC--Ee---c-------------CCCCcEEEEEc--CCEEEEEEcccCC
Q psy16863 357 HDIAVKVGTRARLLVEIRSPT--EIKIHWYRND--RK---L-------------EENKIYRTQHD--GNFYFIDLSSVSL 414 (1075)
Q Consensus 357 ~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~g--~~---l-------------~~~~~~~~~~~--g~~~~L~I~~v~~ 414 (1075)
..+.+.+|++++|.|.+.+.+ ...+.|||.. .. + ....|+.+..+ .....|.|.+++.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 87 (263)
T 3iu4_H 8 GPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQT 87 (263)
T ss_dssp CCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCG
T ss_pred CCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCH
Confidence 457899999999999997643 5689999842 11 1 01245655433 3567899999999
Q ss_pred CCceeEEEEEEeCCC--------ceeeEEEEEeecCCCCCCCeee-eecceEEecCCeEEEEEEEECC-CC-CeEEEEeC
Q psy16863 415 FDSGRWTCLAENAVG--------RSHCSCELSVLVPKAYKAPFFT-KELEAILTEQGTVSLECKVMGI-PT-PQLIWYKD 483 (1075)
Q Consensus 415 ~d~G~Y~C~a~n~~g--------~~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~v~l~C~~~g~-p~-~~v~W~~~ 483 (1075)
+|+|.|.|.+.+..+ .......|.|...+. .+|.+. ..+...+..|+.+.|.|.+.+. |. +.++| +
T Consensus 88 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~-~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W--~ 164 (263)
T 3iu4_H 88 DDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAAST-KGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW--N 164 (263)
T ss_dssp GGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCC-BCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE--G
T ss_pred HHCEEEEEEEEeCCCCccccccceeCCceEEEEecccC-CCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE--C
Confidence 999999999988631 111234666654322 334443 2333334578999999999874 43 58999 4
Q ss_pred CEeccC-----------CCEE----EEEeCCCCCCCcEEEEEEEEecceeeEEEE
Q psy16863 484 NKKIKA-----------GDIF----ALTANPKDPSSLGTYTCEAVNCMGAAFSTS 523 (1075)
Q Consensus 484 g~~l~~-----------~~~~----~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 523 (1075)
+..+.. +..+ .|.+......| |.|+|.+.|..+......
T Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~ 218 (263)
T 3iu4_H 165 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDK 218 (263)
T ss_dssp GGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEE
T ss_pred CcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeE
Confidence 443321 1222 56777777778 999999999887654443
No 463
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=3.3e-13 Score=118.86 Aligned_cols=90 Identities=16% Similarity=0.232 Sum_probs=77.1
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCC----cEEEEEeeCcEEEEEEccccCCCCeEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESD----NVKILKETLGVCHLKIHALEVADQAEWKC 822 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~----~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 822 (1075)
.||.|...+.+..+.+|+++.|.|.+.+.| |.+.|+|||.++..+. ++.+... .....|.|.+++.+|+|.|+|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C 84 (101)
T 2edk_A 7 GPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKD-GKRHILIFSDVVQEDRGRYQV 84 (101)
T ss_dssp CCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEEC-SSEEEEECSSCCGGGCSBEEE
T ss_pred CCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEEC-CCEEEEEECCCChhhCEEEEE
Confidence 578999999999999999999999999988 9999999999998776 6676643 456789999999999999999
Q ss_pred EEEeCCceEEEEEEEEEEec
Q psy16863 823 IATNDFGQSITSCFLKLNVP 842 (1075)
Q Consensus 823 ~A~N~~G~~~~s~~l~V~~~ 842 (1075)
.|.| ...++.|.|..+
T Consensus 85 ~a~n----~~~~~~l~V~~~ 100 (101)
T 2edk_A 85 ITNG----GQCEAELIVEEK 100 (101)
T ss_dssp ECSS----CEECCBEEEECC
T ss_pred EEcC----CcEEEEEEEeCC
Confidence 9988 345677777754
No 464
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.36 E-value=9.1e-13 Score=117.20 Aligned_cols=91 Identities=14% Similarity=0.196 Sum_probs=79.2
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+.+..+.+|+++.|.|.+.+.|.+ +.|+|+|..+..+.++.+... .....|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHV-GRFHKLVIDDVRPEDEGDYTFVPDG 84 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEE-TTEEEEEESSCCTTTCSCEEEEEET
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEe-CCEEEEEECCCCcCCCEEEEEEEcc
Confidence 68999999999999999999999999998887 999999999988888887644 4567899999999999999999999
Q ss_pred CCceEEEEEEEEEEe
Q psy16863 827 DFGQSITSCFLKLNV 841 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~ 841 (1075)
. ....++.|.|..
T Consensus 85 ~--~~~~~~~l~V~~ 97 (106)
T 2dlt_A 85 Y--ALSLSAKLNFLE 97 (106)
T ss_dssp S--CCCCCBCEEEEC
T ss_pred C--CceEEEEEEEEE
Confidence 8 444566777764
No 465
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.36 E-value=1.8e-12 Score=115.28 Aligned_cols=92 Identities=21% Similarity=0.327 Sum_probs=80.7
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
..+|.|...+.+..+.+|+++.|.|.+.+.|.+ +.|||+|..+..+.++.+..++..+.|.|.++..+|+|.|+|.|.|
T Consensus 6 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (106)
T 2dlt_A 6 SGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDG 84 (106)
T ss_dssp CCCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEET
T ss_pred CCCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEcc
Confidence 358889999999999999999999999888776 9999999999888888888889888999999999999999999999
Q ss_pred CCCceeeEEEEEeec
Q psy16863 427 AVGRSHCSCELSVLV 441 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~~ 441 (1075)
. ....++.|.|..
T Consensus 85 ~--~~~~~~~l~V~~ 97 (106)
T 2dlt_A 85 Y--ALSLSAKLNFLE 97 (106)
T ss_dssp S--CCCCCBCEEEEC
T ss_pred C--CceEEEEEEEEE
Confidence 8 344456666653
No 466
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.36 E-value=3.3e-12 Score=129.38 Aligned_cols=158 Identities=16% Similarity=0.246 Sum_probs=104.9
Q ss_pred eeeecCceeeccCCeEEEEEEEecCCCcEEEEEECC--E---ec-------CCCCcEEEEEc---CCEEEEEEcccCCCC
Q psy16863 352 FIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRND--R---KL-------EENKIYRTQHD---GNFYFIDLSSVSLFD 416 (1075)
Q Consensus 352 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g--~---~l-------~~~~~~~~~~~---g~~~~L~I~~v~~~d 416 (1075)
+...+..+.+.+|++++|.|.+.+.+ +.+.|||.+ . .+ ....|+.+..+ .....|.|.+++.+|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D 82 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLED 82 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGG
T ss_pred cEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHH
Confidence 34455677899999999999997654 589999953 2 11 12356666654 566789999999999
Q ss_pred ceeEEEEEEeCCC---------c--eeeEEEEEeecCCC-CCCCeeeeecceEEecCCeEEEEEEEECC-CC-CeEEEEe
Q psy16863 417 SGRWTCLAENAVG---------R--SHCSCELSVLVPKA-YKAPFFTKELEAILTEQGTVSLECKVMGI-PT-PQLIWYK 482 (1075)
Q Consensus 417 ~G~Y~C~a~n~~g---------~--~~~s~~l~V~~~~~-~~~p~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~v~W~~ 482 (1075)
+|.|.|.+.+..+ . ......|.|..... ..+|.+.. ..+ .+.|.|.+.|. |. +.++|++
T Consensus 83 ~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~v~~------~~~-~~~l~C~~~g~~P~~~~v~W~~ 155 (207)
T 1ypz_E 83 SGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPSVFI------MKN-GTNVACLVKDFYPKEVTISLRS 155 (207)
T ss_dssp CEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCEEEE------EEE-TTEEEEEEEEESSSCCEEEEEC
T ss_pred CEEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCCeEEE------eCC-CCeEEEEEeeEeCCCeEEEEec
Confidence 9999999998642 1 11235677764321 12232221 111 27999999875 54 6999999
Q ss_pred CCEeccCC---------CEEEEEeCCCCCCCcEEEEEEEEecceee
Q psy16863 483 DNKKIKAG---------DIFALTANPKDPSSLGTYTCEAVNCMGAA 519 (1075)
Q Consensus 483 ~g~~l~~~---------~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 519 (1075)
+ +.+..+ ..+.+. ......|.|.|+|.|.|..+..
T Consensus 156 ~-~~l~~~~~~~~~~~~g~y~~~-~~~~~~~~~~ytC~v~~~~~~~ 199 (207)
T 1ypz_E 156 S-KKIVEFDPAIVISPSGKYSAV-KLGQYGDSNSVTCSVQHNSETV 199 (207)
T ss_dssp S-SEEEECCCEEEECTTSSEEEE-ECEEESSTTTCEEEEEETTEEE
T ss_pred C-CcccCCccceEEcCCCcEEEE-EeecccCCCcEEEEEEECCccE
Confidence 9 666422 233333 2223366899999999987654
No 467
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=1.9e-12 Score=114.73 Aligned_cols=92 Identities=21% Similarity=0.285 Sum_probs=77.7
Q ss_pred CCCeEEeccce---eeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEE
Q psy16863 747 KAPKFIEGLKS---CQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCI 823 (1075)
Q Consensus 747 ~~p~~~~~~~~---~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 823 (1075)
.+|.++..+.. ..+.+|+++.|.|.+.+.|.+ +.|+|+|+.+..+.++.+... .....|.|.+++.+|+|.|+|.
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~ 83 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMD-GRKHRLILPEAKVQDSGEFECR 83 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEE-TTEEEEEESSCCTTTCEEEEEE
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeC-CCEEEEEECCCChhhCEEEEEE
Confidence 46777666665 789999999999999999998 999999999988888877643 4567899999999999999999
Q ss_pred EEeCCceEEEEEEEEEEecCC
Q psy16863 824 ATNDFGQSITSCFLKLNVPKH 844 (1075)
Q Consensus 824 A~N~~G~~~~s~~l~V~~~~~ 844 (1075)
|.|..+ ++.|.|.++|.
T Consensus 84 a~n~~~----~~~l~V~~~P~ 100 (104)
T 2e6p_A 84 TEGVSA----FFGVTVQDPSG 100 (104)
T ss_dssp CSSCCC----CEEEEEECCCC
T ss_pred ECCceE----EEEEEEcCCCC
Confidence 999855 56788887653
No 468
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.36 E-value=3.2e-12 Score=110.97 Aligned_cols=88 Identities=22% Similarity=0.268 Sum_probs=76.9
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.+|.|...+.+..+.+|+++.|.|.+ +.|.+.+.|+|+|..+..+.++.+... .....|.|.+++.+|+|.|+|.|
T Consensus 7 ~~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a-- 82 (95)
T 2k1m_A 7 PVSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATE-GTRHTLTVREVGPADQGSYAVIA-- 82 (95)
T ss_dssp CCCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEE-TTEEEEEESSCCTTCCSEEEEEE--
T ss_pred CCCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEc-CCEEEEEEcCCCcccCEEEEEEE--
Confidence 35788888889999999999999999 789999999999999998888887654 34678999999999999999999
Q ss_pred CCceEEEEEEEEEE
Q psy16863 827 DFGQSITSCFLKLN 840 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~ 840 (1075)
|....++.|.|.
T Consensus 83 --g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 --GSSKVKFDLKVI 94 (95)
T ss_dssp --TTEEEEEEEEEE
T ss_pred --CCceEEEEEEEe
Confidence 667777888775
No 469
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.36 E-value=5.9e-12 Score=112.81 Aligned_cols=83 Identities=16% Similarity=0.171 Sum_probs=70.7
Q ss_pred ccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEc-----C--CEEEEEEcccCCCCceeEEEEEEeCCCceeeE
Q psy16863 362 KVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHD-----G--NFYFIDLSSVSLFDSGRWTCLAENAVGRSHCS 434 (1075)
Q Consensus 362 ~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~-----g--~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s 434 (1075)
..+..+.|.|.+.|.|.|+|+|+|||++|..+.++.+... + ....|.|.+++..|+|.|+|.|+|..|....+
T Consensus 13 ~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t 92 (126)
T 1he7_A 13 VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS 92 (126)
T ss_dssp CCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEE
T ss_pred ccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEE
Confidence 3678899999999999999999999999998877544322 1 23579999999999999999999999999999
Q ss_pred EEEEeecCCC
Q psy16863 435 CELSVLVPKA 444 (1075)
Q Consensus 435 ~~l~V~~~~~ 444 (1075)
+.|.|...|.
T Consensus 93 ~~l~v~~~P~ 102 (126)
T 1he7_A 93 IMAAFMDNPF 102 (126)
T ss_dssp EEECCCSCTT
T ss_pred EEEEEEcCCC
Confidence 8898887653
No 470
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.36 E-value=3.5e-12 Score=131.40 Aligned_cols=164 Identities=15% Similarity=0.262 Sum_probs=104.1
Q ss_pred eeeeecCCeEEEEEEEecC--CCCeEEEEECC--E---Ee---e-----------cCCcEEEEEee-CcEEEEEEccccC
Q psy16863 757 SCQATVNEEFKFTVQVSIS--PEPKVSWFRDD--Q---QV---V-----------ESDNVKILKET-LGVCHLKIHALEV 814 (1075)
Q Consensus 757 ~~~~~~g~~~~l~C~v~g~--p~p~v~W~k~g--~---~i---~-----------~~~~~~~~~~~-~~~~~L~I~~~~~ 814 (1075)
...+.+|++++|.|.+.+. +...+.|||.. . .+ . ...|+.+..+. .+.+.|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (226)
T 3mlr_H 9 GEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQA 88 (226)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCG
T ss_pred CEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCc
Confidence 3568899999999999863 35689999842 1 11 0 12466665443 3578899999999
Q ss_pred CCCeEEEEEEEeCCc-------eEE--EEEEEEEEecCCCCCCeee-eecceeecCCCeEEEEEEEEcc-C-CCeeEEEE
Q psy16863 815 ADQAEWKCIATNDFG-------QSI--TSCFLKLNVPKHYKKPKFL-EELKAVLSEGGAVNLECKVIGV-P-QPTLKWFK 882 (1075)
Q Consensus 815 ~D~G~Y~C~A~N~~G-------~~~--~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~~~L~C~v~g~-p-~p~v~W~k 882 (1075)
+|+|.|.|.+.|..+ ... ....|.|...+ ..+|.+. ......+.+|+.++|.|.+.+. | .+.++|
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~-~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W-- 165 (226)
T 3mlr_H 89 SDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGT-TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW-- 165 (226)
T ss_dssp GGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCC-CBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEE--
T ss_pred ccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCC-CCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEE--
Confidence 999999999987531 011 12345554322 2344443 2222234589999999999985 3 357999
Q ss_pred CCEEcCC-----------CCee----EEEECCCCceeeEEEEEEEEeCCeeEEEEEE
Q psy16863 883 DGRELKA-----------GDIH----KIISGEDGTCCLGIYTCEAHNCMGTTSSSAA 924 (1075)
Q Consensus 883 ~g~~l~~-----------~~~~----~i~~~~~~~~d~G~Y~C~a~N~~G~~~~~~~ 924 (1075)
+|..+.. +..+ .|.+......| |.|+|.|.|..+.......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~ 221 (226)
T 3mlr_H 166 NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKK 221 (226)
T ss_dssp GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEE
T ss_pred CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeEEE
Confidence 5443321 1112 23333333446 9999999999887655443
No 471
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.36 E-value=3.7e-12 Score=115.81 Aligned_cols=94 Identities=15% Similarity=0.164 Sum_probs=74.4
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeC---cEEEEEEccccCCCCeEEEEE
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETL---GVCHLKIHALEVADQAEWKCI 823 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~ 823 (1075)
.||.+.... ... ..+...|.|.+.|.|.|.++|+|+|+.+..+.++.+..... ....|.|.+++.+|+|.|+|.
T Consensus 7 ~pP~i~~~~-~~~--~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 83 (118)
T 1wwc_A 7 YPPRVVSLE-EPE--LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLI 83 (118)
T ss_dssp CCCCCCCCC-CCC--CCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEE
T ss_pred cCCceeccC-CCe--eccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEE
Confidence 577765542 222 23667899999999999999999999998887666544321 245899999999999999999
Q ss_pred EEeCCceEEEEEEEEEEecC
Q psy16863 824 ATNDFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 824 A~N~~G~~~~s~~l~V~~~~ 843 (1075)
|.|.+|.+.+++.|.|..+|
T Consensus 84 a~N~~G~~~~~~~l~v~~~P 103 (118)
T 1wwc_A 84 AKNPLGTANQTINGHFLKEP 103 (118)
T ss_dssp EEETTEEEEEEEEECCSCCC
T ss_pred EECCCCeEeeEEEEEEccCC
Confidence 99999999888888776543
No 472
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.35 E-value=4.7e-12 Score=121.34 Aligned_cols=97 Identities=24% Similarity=0.460 Sum_probs=85.5
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEc-CCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHD-GNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~-g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
.+|.|...+.+..+.+|+.++|.|.+.|.|.+.|.|||+|..+..+.++.+... +....|.|.+++.+|+|.|+|.|.|
T Consensus 40 ~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 119 (154)
T 1fhg_A 40 VKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVN 119 (154)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEE
Confidence 478888888889999999999999999999999999999999988888777643 3457899999999999999999999
Q ss_pred CCCceeeEEEEEeecCCC
Q psy16863 427 AVGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 427 ~~g~~~~s~~l~V~~~~~ 444 (1075)
..|....++.|.|..++.
T Consensus 120 ~~G~~~~~~~l~V~~~p~ 137 (154)
T 1fhg_A 120 SLGEATCTAELLVETMGK 137 (154)
T ss_dssp TTEEEEEEEEEEEECC--
T ss_pred CCCeEEEEEEEEEeCcCc
Confidence 999999899999987764
No 473
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=1.9e-12 Score=116.11 Aligned_cols=98 Identities=19% Similarity=0.350 Sum_probs=84.5
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEE-EcCCEEEEEEcccCCCCceeEEEEEE
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQ-HDGNFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~-~~g~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
..+|.|...+..+.+.+|+.++|.|.+.|.|.+.|.|+|+|..+....+..+. ..+....|.|.+++.+|+|.|+|.|.
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEE
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEE
Confidence 35889998889999999999999999999999999999999998776654433 34445679999999999999999999
Q ss_pred eCCCceeeEEEEEeecCCC
Q psy16863 426 NAVGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 426 n~~g~~~~s~~l~V~~~~~ 444 (1075)
|..|....++.|.|..++.
T Consensus 87 n~~g~~~~~~~l~V~~~p~ 105 (110)
T 2dm3_A 87 NRAGQNSFSLELVVAAKES 105 (110)
T ss_dssp CSSCEEEECCEEEEECCCC
T ss_pred CCCCEEEEEEEEEEeCCCC
Confidence 9999988888888887654
No 474
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=6.6e-13 Score=116.92 Aligned_cols=90 Identities=27% Similarity=0.451 Sum_probs=78.2
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCC----cEEEEEcCCEEEEEEcccCCCCceeEEEE
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENK----IYRTQHDGNFYFIDLSSVSLFDSGRWTCL 423 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~----~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~ 423 (1075)
.||.|...+.+..+.+|++++|.|.+.+.| +.+.|||||..+..+. ++.+..++..+.|.|.++..+|+|.|+|.
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 85 (101)
T 2edk_A 7 GPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVI 85 (101)
T ss_dssp CCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEE
T ss_pred CCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEE
Confidence 578888888999999999999999998888 9999999999998766 66888888888999999999999999999
Q ss_pred EEeCCCceeeEEEEEeecC
Q psy16863 424 AENAVGRSHCSCELSVLVP 442 (1075)
Q Consensus 424 a~n~~g~~~~s~~l~V~~~ 442 (1075)
|.| ...++.|.|..+
T Consensus 86 a~n----~~~~~~l~V~~~ 100 (101)
T 2edk_A 86 TNG----GQCEAELIVEEK 100 (101)
T ss_dssp CSS----CEECCBEEEECC
T ss_pred EcC----CcEEEEEEEeCC
Confidence 986 344566777654
No 475
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.34 E-value=3.6e-11 Score=116.48 Aligned_cols=151 Identities=15% Similarity=0.147 Sum_probs=102.6
Q ss_pred cCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEE-EEcCCEEEEEEcccCCCCceeEEEEEEeCCCceeeE
Q psy16863 356 LHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRT-QHDGNFYFIDLSSVSLFDSGRWTCLAENAVGRSHCS 434 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~-~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s 434 (1075)
+.+..|.+|+++.|.|.+....+..+.|.-. +. +... ........|.|.+++. | |.|.|.+.........+
T Consensus 6 P~~~~V~~G~Sv~l~Cs~~c~~p~~~~~~t~---l~---~~~~~~~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~ 77 (185)
T 1iam_A 6 PSKVILPRGGSVLVTCSTSCDQPKLLGIETP---LP---KKELLLPGNNRKVYELSNVQE-D-SQPMCYSNCPDGQSTAK 77 (185)
T ss_dssp SSEEEEETTEEEEEEEEECSSSCSEEEEECS---SC---EEEECSSSSSEEEEEEEEECS-C-BCCEEEEECSSCEEEEE
T ss_pred CCCcEEeCCCCEEEEEEccCCCCccceEEee---CC---CccEeccCCceeEEEEEecCc-C-CEEEEEEECCCCceEEE
Confidence 3556799999999999996544445777521 10 1111 1112345688999983 4 99999997664555677
Q ss_pred EEEEeecCCCCCCCeeeeecceEEecCCeEEEEEEEEC-CCCC--eEEEEeCCEeccC------CCEEEEEeCCCCCCCc
Q psy16863 435 CELSVLVPKAYKAPFFTKELEAILTEQGTVSLECKVMG-IPTP--QLIWYKDNKKIKA------GDIFALTANPKDPSSL 505 (1075)
Q Consensus 435 ~~l~V~~~~~~~~p~~~~~~~~~~~~g~~v~l~C~~~g-~p~~--~v~W~~~g~~l~~------~~~~~l~i~~~~~~d~ 505 (1075)
+.|.|..+|.. ..+......+.+|+.++|.|.+.| .|.. .|+|||+++++.. ....+|++.....+|.
T Consensus 78 ~~l~V~~~P~~---v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~~~~~~~~tl~~~~~reD~g 154 (185)
T 1iam_A 78 TFLTVYWTPER---VELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHG 154 (185)
T ss_dssp CEEEEEBCCSE---EEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECCSSCSS
T ss_pred EEEEEeCCCCC---CEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccCCCccccEEEEEeceeccCC
Confidence 77888776542 222222335889999999999998 4553 5899999999853 2234667666555666
Q ss_pred EEEEEEEEecce
Q psy16863 506 GTYTCEAVNCMG 517 (1075)
Q Consensus 506 G~Y~C~a~n~~g 517 (1075)
..|+|+|.|..+
T Consensus 155 ~~~sC~A~~~l~ 166 (185)
T 1iam_A 155 AQFSCRTELDLR 166 (185)
T ss_dssp CEEEEEEEEECG
T ss_pred CeEEEEEEecCc
Confidence 699999999765
No 476
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.34 E-value=1.3e-12 Score=116.89 Aligned_cols=94 Identities=16% Similarity=0.283 Sum_probs=72.6
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.+|.|...+.+..+.+|+.+.|.|.+.|.|.+.+.|+|+|..+....++.+...+. .|.|.+++.+|+|.|+|.|.|.
T Consensus 9 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~a~n~ 86 (108)
T 3kvq_A 9 VAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNR--NLTIRRVRKEDEGLYTCQACSV 86 (108)
T ss_dssp --CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTT--EEEECSCCGGGCEEEEEEEC--
T ss_pred CCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCc--EEEEeecCcccCEEEEEEEEeC
Confidence 48888888889999999999999999999999999999999988777665544433 5899999999999999999999
Q ss_pred CCceeeEEEEEeecCC
Q psy16863 428 VGRSHCSCELSVLVPK 443 (1075)
Q Consensus 428 ~g~~~~s~~l~V~~~~ 443 (1075)
.|....++.|.|..++
T Consensus 87 ~g~~~~~~~l~V~~~~ 102 (108)
T 3kvq_A 87 LGCAKVEAFFIIEGAQ 102 (108)
T ss_dssp --CEEEEEEEEEEC--
T ss_pred CCceEEEEEEEEeCCC
Confidence 9999999999888765
No 477
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.34 E-value=2e-12 Score=112.26 Aligned_cols=88 Identities=19% Similarity=0.339 Sum_probs=76.7
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEe
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAEN 426 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n 426 (1075)
+.||.|...+....+.+|+++.|.|.+.|.| +.|.|+|+|..+..+.++.+. +. .|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~--~~--~L~i~~~~~~D~G~Y~C~a~n 81 (95)
T 2ckn_A 7 AQPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT--GE--EVEVRDSIPADSGLYACVTSS 81 (95)
T ss_dssp SCSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC--SS--EEEESSCCGGGSEEEEEEEEE
T ss_pred CCCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe--CC--EEEECCCChHHCEEEEEEecc
Confidence 4678888888899999999999999999987 799999999999877776554 22 589999999999999999999
Q ss_pred CCCceeeEEEEEe
Q psy16863 427 AVGRSHCSCELSV 439 (1075)
Q Consensus 427 ~~g~~~~s~~l~V 439 (1075)
..|....++.|.|
T Consensus 82 ~~g~~~~~~~l~V 94 (95)
T 2ckn_A 82 PSGSDTTYFSVNV 94 (95)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEE
Confidence 9999887777766
No 478
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.34 E-value=3.1e-12 Score=114.85 Aligned_cols=104 Identities=15% Similarity=0.282 Sum_probs=78.3
Q ss_pred cccceeecceeEEeeCCeEEEEEEecCCCeeEEEEccCCCeeEEEeeCCCcee---ccCcEEEEec--C----CeEEEEE
Q psy16863 135 APAFIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPI---FGNRFRAINR--D----GRTELNI 205 (1075)
Q Consensus 135 ~p~~~~~~~~~~v~~G~~~~l~c~~~~~~~~~c~~~~~~~~~~~W~~~~~~~~---~~~~~~~~~~--~----~~~~L~I 205 (1075)
.|.|+..++++.|.+|++++|.|.+.+.. +.|.+.+.|+|+..... .+.++.+... + ..+.|+|
T Consensus 7 ~~~F~~~P~~v~V~eG~~v~L~C~v~g~~-------~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I 79 (126)
T 2dav_A 7 GILFIEKPQGGTVKVGEDITFIAKVKAED-------LLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQI 79 (126)
T ss_dssp SCSCCSCCCCCEEETTCCEEEEEEEECCC-------SSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEE
T ss_pred ccEEEEcCCCeEEeCCCCEEEEEEEeccC-------CCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEE
Confidence 35688999999999999999999887532 23678999999642221 1345544321 1 2478999
Q ss_pred ceeccCCCeEEEEEEEcCceeEEEEEEEeeeccCCCCCcc
Q psy16863 206 RRVRRDDGGRYSVTASNESGYSTAKFELSVESQVPDAPAF 245 (1075)
Q Consensus 206 ~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~ 245 (1075)
.+++.+|+|.|+|.|+|..|..+..++|+|....+..|.+
T Consensus 80 ~~v~~~DaG~Y~Cevsn~~g~~~~~~~L~V~~~~~~~p~~ 119 (126)
T 2dav_A 80 IKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGTTPNI 119 (126)
T ss_dssp CSCCTTSCEEEEEEEECSSCEEEECCEEEEECCCCSCCCC
T ss_pred ccCCcccCEEEEEEEEeCCCcEEEEEEEEEEecCCCCCeE
Confidence 9999999999999999999999999999998644444443
No 479
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.34 E-value=3.4e-12 Score=112.46 Aligned_cols=89 Identities=21% Similarity=0.366 Sum_probs=75.5
Q ss_pred CCCCeEEeccce-eeeecCCeEEEEEEEecCCCCeEEEEECCEEeecC-CcEEEEEeeCcEEEEEEccccCCCCeEEEEE
Q psy16863 746 NKAPKFIEGLKS-CQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVES-DNVKILKETLGVCHLKIHALEVADQAEWKCI 823 (1075)
Q Consensus 746 ~~~p~~~~~~~~-~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 823 (1075)
..+|.|+..+.+ ..+.+|+++.|.|.+ +.|.+.++|+|+|.+|..+ .++.+... ...+.|.|.+++.+|+|.|+|.
T Consensus 13 ~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~ 90 (104)
T 1pd6_A 13 KKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESI-GAKRTLTISQCSLADDAAYQCV 90 (104)
T ss_dssp STTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEE-TTEEEEEECSCSSSSCEEEEEE
T ss_pred cCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEec-CCEEEEEECCCCcccCEEEEEE
Confidence 368899988877 789999999999999 6899999999999999887 78877644 3477999999999999999999
Q ss_pred EEeCCceEEEEEEEEEE
Q psy16863 824 ATNDFGQSITSCFLKLN 840 (1075)
Q Consensus 824 A~N~~G~~~~s~~l~V~ 840 (1075)
| |....++.|.|.
T Consensus 91 a----~~~~~~~~l~V~ 103 (104)
T 1pd6_A 91 V----GGEKCSTELFVK 103 (104)
T ss_dssp E----TTEEECCEEEEE
T ss_pred E----CCCcEEEEEEEe
Confidence 9 445566777764
No 480
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.34 E-value=2.1e-12 Score=119.82 Aligned_cols=85 Identities=21% Similarity=0.308 Sum_probs=74.8
Q ss_pred cCceeeccCCeEEEEEEEecCCCcEEEEEECC----------------------------Eec-CCCCcEEEEEcCCEEE
Q psy16863 356 LHDIAVKVGTRARLLVEIRSPTEIKIHWYRND----------------------------RKL-EENKIYRTQHDGNFYF 406 (1075)
Q Consensus 356 ~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g----------------------------~~l-~~~~~~~~~~~g~~~~ 406 (1075)
+.++.+.+|++++|.|.+.|.|.|.|+|+|+| ..+ ....++.+...+....
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 46789999999999999999999999999999 555 3456777777788788
Q ss_pred EEEcccCCCCceeEEEEEEeCCCceeeEEEEEee
Q psy16863 407 IDLSSVSLFDSGRWTCLAENAVGRSHCSCELSVL 440 (1075)
Q Consensus 407 L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V~ 440 (1075)
|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999999999999999999998888887774
No 481
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.34 E-value=9.7e-12 Score=130.97 Aligned_cols=167 Identities=18% Similarity=0.249 Sum_probs=108.5
Q ss_pred CceeeccCCeEEEEEEEecCC--CcEEEEEECC--Ee---c--------------CCCCcEEEEEc--CCEEEEEEcccC
Q psy16863 357 HDIAVKVGTRARLLVEIRSPT--EIKIHWYRND--RK---L--------------EENKIYRTQHD--GNFYFIDLSSVS 413 (1075)
Q Consensus 357 ~~~~v~~G~~v~l~C~~~g~p--~~~v~W~k~g--~~---l--------------~~~~~~~~~~~--g~~~~L~I~~v~ 413 (1075)
..+.+.+|++++|.|.+.+.+ ...+.|||.. .. + ....|+.+..+ .....|+|.+++
T Consensus 31 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (256)
T 3sob_H 31 GGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLR 110 (256)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCC
Confidence 456789999999999997632 5689999842 11 1 01245555433 356679999999
Q ss_pred CCCceeEEEEEEeCCC-----------ceeeEEEEEeecCCCCCCCeee-eecceEEecCCeEEEEEEEEC-CC-CCeEE
Q psy16863 414 LFDSGRWTCLAENAVG-----------RSHCSCELSVLVPKAYKAPFFT-KELEAILTEQGTVSLECKVMG-IP-TPQLI 479 (1075)
Q Consensus 414 ~~d~G~Y~C~a~n~~g-----------~~~~s~~l~V~~~~~~~~p~~~-~~~~~~~~~g~~v~l~C~~~g-~p-~~~v~ 479 (1075)
.+|+|.|.|.+.+..| .......|.|...+. .+|.+. ..+...+.+|+.++|.|.+.+ .| ++.+.
T Consensus 111 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~-~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~v~ 189 (256)
T 3sob_H 111 AEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSAST-KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS 189 (256)
T ss_dssp GGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCC-BCCEEEEECCC-----TTEEEEEEEEEEEBSSCCEEE
T ss_pred cccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCC-CCCEEEEECCCcccccCCcEEEEEEEEEEECCCeEEE
Confidence 9999999999987531 112234566654332 334443 333334568999999999987 45 34899
Q ss_pred EEeCCEeccC-----------CCE----EEEEeCCCCCCCcEEEEEEEEecceeeEEEEEEEE
Q psy16863 480 WYKDNKKIKA-----------GDI----FALTANPKDPSSLGTYTCEAVNCMGAAFSTSRVIA 527 (1075)
Q Consensus 480 W~~~g~~l~~-----------~~~----~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~v~v 527 (1075)
| ++..+.. +.. ..|.+......| |.|+|.+.|..+.......+.+
T Consensus 190 W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~ 249 (256)
T 3sob_H 190 W--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 249 (256)
T ss_dssp E--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred E--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEecc
Confidence 9 5554421 122 257777778888 9999999999876655554443
No 482
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.33 E-value=1.5e-11 Score=129.50 Aligned_cols=186 Identities=15% Similarity=0.182 Sum_probs=113.0
Q ss_pred cceeeccceeEEEEEecCC----CceEEEEe-cCCCeeeE-EecC-CCc----cccCCCeEEEee--CCeEEEEEcccCC
Q psy16863 251 DIAVKVGTRARLLVEIRSP----TEIKCQFD-LNNTIPFS-FRAQ-GDH----PIFGNRFRAINR--DGRTELNIRRVRR 317 (1075)
Q Consensus 251 ~~~v~~g~~~~l~c~~~~~----~~~~c~~~-~~~~~~~~-w~~~-~~~----~~~~~~~~~~~~--~~~~~L~I~~~~~ 317 (1075)
...+.+|+.++|.|...+. ..+.|... .+....+. .... +.. .....|+.+..+ .+..+|+|.+++.
T Consensus 32 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 111 (256)
T 3sob_H 32 GGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRA 111 (256)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred cEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCc
Confidence 4568899999999998642 22322211 11111211 1111 111 011356766543 3567899999999
Q ss_pred CCCEEEEEEEEeCC-----------eeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEec-CC-CcEEEEE
Q psy16863 318 DDGGRYSVTASNES-----------GYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRS-PT-EIKIHWY 384 (1075)
Q Consensus 318 ~d~G~Y~C~a~n~~-----------g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g-~p-~~~v~W~ 384 (1075)
+|+|.|.|.+.+.. ........|.|......+|.+........+.+|+.++|.|.+.+ .| ++.+.|
T Consensus 112 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~v~W- 190 (256)
T 3sob_H 112 EDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW- 190 (256)
T ss_dssp GGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCCEEEE-
T ss_pred ccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCeEEEE-
Confidence 99999999998743 12233456777654556677664444556779999999999977 44 568999
Q ss_pred ECCEecCCCCc---EEEEEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeEEEEEe
Q psy16863 385 RNDRKLEENKI---YRTQHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCSCELSV 439 (1075)
Q Consensus 385 k~g~~l~~~~~---~~~~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s~~l~V 439 (1075)
+|..+..... .....++.. ..|.|.....+| |.|+|.+.|..+.......+.+
T Consensus 191 -~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~ 249 (256)
T 3sob_H 191 -NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 249 (256)
T ss_dssp -GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred -CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEecc
Confidence 6655532211 111122322 368899998899 9999999999877665555544
No 483
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=2.9e-12 Score=113.61 Aligned_cols=95 Identities=15% Similarity=0.337 Sum_probs=76.2
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecC---CCcEEEEEECC-EecCC--CCcEEEEE--cC----CEEEEEEcccCCC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSP---TEIKIHWYRND-RKLEE--NKIYRTQH--DG----NFYFIDLSSVSLF 415 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~---p~~~v~W~k~g-~~l~~--~~~~~~~~--~g----~~~~L~I~~v~~~ 415 (1075)
..+.|+..+.++.+.+|++++|.|.+.|. |.|.|+|||+. ..+.. ..++.+.. ++ ..+.|+|.+++.+
T Consensus 11 ~~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 90 (118)
T 2edn_A 11 PTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLG 90 (118)
T ss_dssp CSSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTT
T ss_pred CcceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChh
Confidence 35678888999999999999999999875 68999999975 22221 23444432 21 1468999999999
Q ss_pred CceeEEEEEEeCCCceeeEEEEEeecC
Q psy16863 416 DSGRWTCLAENAVGRSHCSCELSVLVP 442 (1075)
Q Consensus 416 d~G~Y~C~a~n~~g~~~~s~~l~V~~~ 442 (1075)
|+|.|+|+|+|..|..++++.|+|..+
T Consensus 91 D~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 91 DRGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp TCSCEEEEEECSSCEEEEEECCEEECC
T ss_pred hCEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 999999999999999999999999864
No 484
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.33 E-value=5.1e-12 Score=109.64 Aligned_cols=88 Identities=22% Similarity=0.422 Sum_probs=78.6
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
..|.|...+.+..+.+|+++.|.|.+ +.|.+.+.|||+|..+..+.++.+..++..+.|.|.+++.+|+|.|+|.|
T Consensus 7 ~~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a--- 82 (95)
T 2k1m_A 7 PVSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA--- 82 (95)
T ss_dssp CCCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE---
T ss_pred CCCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE---
Confidence 35778888889999999999999999 78889999999999998888888888898889999999999999999999
Q ss_pred CCceeeEEEEEee
Q psy16863 428 VGRSHCSCELSVL 440 (1075)
Q Consensus 428 ~g~~~~s~~l~V~ 440 (1075)
|....++.|.|.
T Consensus 83 -g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 -GSSKVKFDLKVI 94 (95)
T ss_dssp -TTEEEEEEEEEE
T ss_pred -CCceEEEEEEEe
Confidence 667777777774
No 485
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.33 E-value=7.2e-13 Score=135.36 Aligned_cols=176 Identities=12% Similarity=0.125 Sum_probs=107.9
Q ss_pred cccccccceeeccceeEEEEEecCCCceEEEEecCCCeeeEEecCCCccccCC-CeEE-EeeC---CeEEEEEcccCCCC
Q psy16863 245 FIRRLHDIAVKVGTRARLLVEIRSPTEIKCQFDLNNTIPFSFRAQGDHPIFGN-RFRA-INRD---GRTELNIRRVRRDD 319 (1075)
Q Consensus 245 ~~~~~~~~~v~~g~~~~l~c~~~~~~~~~c~~~~~~~~~~~w~~~~~~~~~~~-~~~~-~~~~---~~~~L~I~~~~~~d 319 (1075)
++..+....+.+|+.++|.|.+.+... ..++.+.| ++....... .... ...+ ....|+|.+++.+|
T Consensus 7 ~~~~P~~~~v~~G~~v~L~C~~~g~~p-------~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D 77 (214)
T 1ow0_A 7 SLHRPALEDLLLGSEANLTCTLTGLRD-------ASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNH 77 (214)
T ss_dssp EEECCCHHHHHHCSSCCCEEEETTCCS-------CCCCCCCB--SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHH
T ss_pred EEECcChHHhccCCCcEEEEEEeeeEC-------CCCeEEEE--cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCC
Confidence 344566777899999999988764310 00145566 222211100 0000 0001 23479999999999
Q ss_pred CEEEEEEEEeCCeeEEEEEEEEEecCCCCCCeeee-ecCceeeccCCeEEEEEEEecC-C-CcEEEEEECCEecCCCCcE
Q psy16863 320 GGRYSVTASNESGYSTAKFELSVESQVPDAPAFIR-RLHDIAVKVGTRARLLVEIRSP-T-EIKIHWYRNDRKLEENKIY 396 (1075)
Q Consensus 320 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~-~~~~~~v~~G~~v~l~C~~~g~-p-~~~v~W~k~g~~l~~~~~~ 396 (1075)
+|.|+|.|.|..+.......+.+ .....+|.+.. .+....+..|+.++|.|.+.|. | .+.|+|+|||..+......
T Consensus 78 ~g~Y~C~~~~~~~~~~~~~~i~~-~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~ 156 (214)
T 1ow0_A 78 GKTFTCTAAYPESKTPLTATLSK-SGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYL 156 (214)
T ss_dssp TCEEEEEECCSSCSSCEEEEEEC-CSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSE
T ss_pred CCeEEEEEecCCCCCceeEeecc-CCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCcee
Confidence 99999999997764322333332 12335776643 3334457789999999999884 5 3599999999998755211
Q ss_pred ----EEE---EcCCEE---EEEEcccCCCCceeEEEEEEeCCCc
Q psy16863 397 ----RTQ---HDGNFY---FIDLSSVSLFDSGRWTCLAENAVGR 430 (1075)
Q Consensus 397 ----~~~---~~g~~~---~L~I~~v~~~d~G~Y~C~a~n~~g~ 430 (1075)
... .+|... .|.|.....+|.|.|+|.|.|....
T Consensus 157 ~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 157 TWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp ECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred ecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 222 344433 3445444445689999999998654
No 486
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=3e-12 Score=113.46 Aligned_cols=92 Identities=23% Similarity=0.387 Sum_probs=79.3
Q ss_pred CCCeeeeecCc---eeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEE
Q psy16863 348 DAPAFIRRLHD---IAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLA 424 (1075)
Q Consensus 348 ~~p~~~~~~~~---~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a 424 (1075)
.+|.++..+.. +.+.+|++++|.|.+.+.|.+ +.|||+|..+..+.++.+..++..+.|.|.+++.+|+|.|+|.|
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 84 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRT 84 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEEC
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEE
Confidence 36666666666 789999999999999998888 99999999998888888888888889999999999999999999
Q ss_pred EeCCCceeeEEEEEeecCCC
Q psy16863 425 ENAVGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 425 ~n~~g~~~~s~~l~V~~~~~ 444 (1075)
.|..+ .+.|.|..+|.
T Consensus 85 ~n~~~----~~~l~V~~~P~ 100 (104)
T 2e6p_A 85 EGVSA----FFGVTVQDPSG 100 (104)
T ss_dssp SSCCC----CEEEEEECCCC
T ss_pred CCceE----EEEEEEcCCCC
Confidence 98744 56788887764
No 487
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=2.9e-12 Score=112.35 Aligned_cols=89 Identities=29% Similarity=0.446 Sum_probs=76.2
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.+|.|...+.+..+.+|+++.|.|.+.|.|.+.+.|+|+|..+...... .......|.|.++..+|+|.|+|.|.|.
T Consensus 10 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 86 (99)
T 2yr3_A 10 VAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARST---CEAGVAELHIQDALPEDHGTYTCLAENA 86 (99)
T ss_dssp EEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCE---EETTEEEEEECSCCTTCCBCEEEEEECS
T ss_pred cCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceE---eeCCeEEEEECCCChhhCEEEEEEEEEC
Confidence 4788888888999999999999999999999999999999988765432 2344567999999999999999999999
Q ss_pred CCceeeEEEEEe
Q psy16863 428 VGRSHCSCELSV 439 (1075)
Q Consensus 428 ~g~~~~s~~l~V 439 (1075)
.|....++.|.|
T Consensus 87 ~g~~~~~~~l~V 98 (99)
T 2yr3_A 87 LGQVSCSAWVTV 98 (99)
T ss_dssp SCEEEEECCEEE
T ss_pred CCeEEEEEEEEE
Confidence 998877776665
No 488
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.33 E-value=1e-11 Score=109.43 Aligned_cols=93 Identities=15% Similarity=0.196 Sum_probs=73.5
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEE--EEcC---CEEEEEEcccCCCCceeEEE
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRT--QHDG---NFYFIDLSSVSLFDSGRWTC 422 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~--~~~g---~~~~L~I~~v~~~d~G~Y~C 422 (1075)
.||.+.... ....|+.+.|.|.+.|.|.|.|+|+|||..|..+.++.. ...+ ....|.|.++..+|+|.|+|
T Consensus 3 ~pP~i~~~~---~~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 79 (103)
T 1wwb_X 3 FAPTITFLE---SPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTL 79 (103)
T ss_dssp CCCCCCCCC---CCCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEE
T ss_pred CCCEEEecc---CceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEE
Confidence 366654222 234688999999999999999999999999987765422 2222 12469999999999999999
Q ss_pred EEEeCCCceeeEEEEEeecCC
Q psy16863 423 LAENAVGRSHCSCELSVLVPK 443 (1075)
Q Consensus 423 ~a~n~~g~~~~s~~l~V~~~~ 443 (1075)
.|+|..|....++.|.|..+|
T Consensus 80 ~A~N~~G~~~~~~~l~V~~~P 100 (103)
T 1wwb_X 80 IAKNEYGKDEKQISAHFMGWP 100 (103)
T ss_dssp EEECSSCEEEEEEEECCSCCC
T ss_pred EEEeCCCcEeEEEEEEECCCC
Confidence 999999999999999887655
No 489
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=4.5e-12 Score=115.27 Aligned_cols=95 Identities=18% Similarity=0.270 Sum_probs=82.5
Q ss_pred CCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCC-CCcEEEEEcCCEEEEEEcccCCCCceeEEEEEE
Q psy16863 347 PDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEE-NKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAE 425 (1075)
Q Consensus 347 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~-~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~ 425 (1075)
..+|.|...+.+..+.+|+++.|.|.+.|.|.+.|.|+|+|..+.. ..++.+..++ .|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETT---EEEEESCCGGGCCCEEEEEE
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCC---EEEEccCCcCCCEEEEEEEE
Confidence 3578888888899999999999999999999999999999998864 4566666555 58999999999999999999
Q ss_pred eCCCceeeEEEEEeecCCC
Q psy16863 426 NAVGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 426 n~~g~~~~s~~l~V~~~~~ 444 (1075)
|..|....++.|.|..++.
T Consensus 83 n~~g~~~~~~~l~V~~~~~ 101 (118)
T 2eo9_A 83 TPSGEATWSAYIEVQEFGV 101 (118)
T ss_dssp CSSCEEEEECCEEEECCSC
T ss_pred cCCCcEEEEEEEEEEeCCC
Confidence 9999988888888887653
No 490
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.32 E-value=7.1e-12 Score=139.99 Aligned_cols=170 Identities=11% Similarity=0.119 Sum_probs=111.7
Q ss_pred eeccceeEEEEEecCC-CceEEEEecCCCeeeEEecCCCccccCC--CeEEEeeC---CeEEEEEcccCCCCCEEEEEEE
Q psy16863 254 VKVGTRARLLVEIRSP-TEIKCQFDLNNTIPFSFRAQGDHPIFGN--RFRAINRD---GRTELNIRRVRRDDGGRYSVTA 327 (1075)
Q Consensus 254 v~~g~~~~l~c~~~~~-~~~~c~~~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~---~~~~L~I~~~~~~d~G~Y~C~a 327 (1075)
+.+|+.++|.|.+.+. +. ...+.+.|+++++...... .......+ ....|.|..++.+|+|.|+|.|
T Consensus 180 ~~~g~~v~L~C~~~g~~P~-------p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~ 252 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKD-------DPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRV 252 (376)
T ss_pred eeeCCeeEEEEEEeccccC-------CCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEE
Confidence 6789999998887642 00 1234678888775542211 00000111 2337999999999999999999
Q ss_pred EeCCeeEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecC-C-CcEEEEEECCEecCCCCcE--EEEEcCC
Q psy16863 328 SNESGYSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSP-T-EIKIHWYRNDRKLEENKIY--RTQHDGN 403 (1075)
Q Consensus 328 ~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~-p-~~~v~W~k~g~~l~~~~~~--~~~~~g~ 403 (1075)
.|..+.......+.+......+|.+...+......+|+.++|.|.+.|. | .+.|+|+|||.++...... ....+|.
T Consensus 253 ~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt 332 (376)
T 2aty_A 253 NSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNES 332 (376)
T ss_pred ecCCCCCceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCC
Confidence 9976643322333222223457877766666666679999999999884 3 5799999999988543222 2234444
Q ss_pred E---EEEEEcccCCCCceeEEEEEEeCCCc
Q psy16863 404 F---YFIDLSSVSLFDSGRWTCLAENAVGR 430 (1075)
Q Consensus 404 ~---~~L~I~~v~~~d~G~Y~C~a~n~~g~ 430 (1075)
. ..|.|.....+|.|.|+|.|.|....
T Consensus 333 y~~~s~L~i~~~~~~~~~~YtC~v~h~~l~ 362 (376)
T 2aty_A 333 YFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 362 (376)
T ss_pred EEEEEEEEEcHHHhCCCCcEEEEEEeCCCC
Confidence 3 35777777777899999999997643
No 491
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.32 E-value=2.8e-11 Score=124.59 Aligned_cols=182 Identities=13% Similarity=0.122 Sum_probs=112.2
Q ss_pred ccceeeccceeEEEEEecCC----CceEEEEe-cCCCeeeE-EecC-CCc----cccCCCeEEEee--CCeEEEEEcccC
Q psy16863 250 HDIAVKVGTRARLLVEIRSP----TEIKCQFD-LNNTIPFS-FRAQ-GDH----PIFGNRFRAINR--DGRTELNIRRVR 316 (1075)
Q Consensus 250 ~~~~v~~g~~~~l~c~~~~~----~~~~c~~~-~~~~~~~~-w~~~-~~~----~~~~~~~~~~~~--~~~~~L~I~~~~ 316 (1075)
..+.+.+|+.++|.|.+.+. ..+.|.-. .+....+. .... +.. .....|+.+..+ .+..+|+|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (226)
T 3mlr_H 8 GGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQ 87 (226)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCC
T ss_pred CCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCC
Confidence 34678899999999998642 22332211 11122221 1111 111 011356776543 356789999999
Q ss_pred CCCCEEEEEEEEeCCe---------eEEEEEEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEec-CC-CcEEEEEE
Q psy16863 317 RDDGGRYSVTASNESG---------YSTAKFELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRS-PT-EIKIHWYR 385 (1075)
Q Consensus 317 ~~d~G~Y~C~a~n~~g---------~~~~~~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g-~p-~~~v~W~k 385 (1075)
.+|+|.|.|.+.+..+ .......|.|......+|.+........+.+|+.++|.|.+.+ .| .+.+.|
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W-- 165 (226)
T 3mlr_H 88 ASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW-- 165 (226)
T ss_dssp GGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEE--
T ss_pred cccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEE--
Confidence 9999999999987421 1112346777654555677664444455678999999999977 44 578999
Q ss_pred CCEecCCCC---cEEEEEcCCE---EEEEEcccCCCCceeEEEEEEeCCCceeeE
Q psy16863 386 NDRKLEENK---IYRTQHDGNF---YFIDLSSVSLFDSGRWTCLAENAVGRSHCS 434 (1075)
Q Consensus 386 ~g~~l~~~~---~~~~~~~g~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~s 434 (1075)
++..+..+. ......+|.. ..|.|.....+| |.|+|.|.|..+.....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~ 219 (226)
T 3mlr_H 166 NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 219 (226)
T ss_dssp GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEE
T ss_pred CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeE
Confidence 554432211 0111122322 368899988889 99999999987765433
No 492
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.31 E-value=5.3e-12 Score=111.58 Aligned_cols=92 Identities=23% Similarity=0.379 Sum_probs=82.8
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEEEcCCEEEEEEcccCCCCceeEEEEEEeC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQHDGNFYFIDLSSVSLFDSGRWTCLAENA 427 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a~n~ 427 (1075)
.+|.|...+.+..+.+|++++|.|.+.+.|.+ +.|+|++..+..+.++.+..++..+.|.|.+++.+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~---- 81 (103)
T 2e7b_A 7 GPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS---- 81 (103)
T ss_dssp CCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE----
T ss_pred CCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE----
Confidence 57888888899999999999999999998888 9999999999888899999999999999999999999999998
Q ss_pred CCceeeEEEEEeecCCC
Q psy16863 428 VGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 428 ~g~~~~s~~l~V~~~~~ 444 (1075)
.|....++.|.|..+|.
T Consensus 82 ~g~~~~~~~l~V~~~p~ 98 (103)
T 2e7b_A 82 FGDQTTSATLTVTALPS 98 (103)
T ss_dssp CSSCBCCBCEEEECCCC
T ss_pred ECCcEEEEEEEEEeccc
Confidence 47777788888887653
No 493
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.31 E-value=2e-12 Score=117.55 Aligned_cols=97 Identities=16% Similarity=0.388 Sum_probs=72.6
Q ss_pred CCCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCC---c-EEEEEeeCcEEEEEE--ccccCCCCeE
Q psy16863 746 NKAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESD---N-VKILKETLGVCHLKI--HALEVADQAE 819 (1075)
Q Consensus 746 ~~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~---~-~~~~~~~~~~~~L~I--~~~~~~D~G~ 819 (1075)
..||.|...+.+..+..|+++.|.|.+.|.|.|.|+|+|+|.++.... + ......+.....|.| .+++.+|+|.
T Consensus 7 ~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~ 86 (117)
T 2v9t_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (117)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEE
T ss_pred cCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEE
Confidence 368899988888999999999999999999999999999999987542 1 112222222223333 3678999999
Q ss_pred EEEEEEeCCceEEE-EEEEEEEec
Q psy16863 820 WKCIATNDFGQSIT-SCFLKLNVP 842 (1075)
Q Consensus 820 Y~C~A~N~~G~~~~-s~~l~V~~~ 842 (1075)
|+|.|.|.+|.+.+ .+.|.|..+
T Consensus 87 Y~C~a~N~~G~~~s~~~~l~~~~~ 110 (117)
T 2v9t_A 87 YVCVARNYLGEAVSHDASLEVAAA 110 (117)
T ss_dssp EEEEEEETTEEEECCCEEEEEC--
T ss_pred EEEEEEeCccceEeeeEEEEhhhh
Confidence 99999999999866 456666543
No 494
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.31 E-value=7.3e-12 Score=107.67 Aligned_cols=82 Identities=12% Similarity=0.186 Sum_probs=69.3
Q ss_pred CCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeC
Q psy16863 748 APKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATND 827 (1075)
Q Consensus 748 ~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~ 827 (1075)
++.|...+....+.+|+.+.|.|.+.|.|.|.+.|+|+|.++....+ ..|.|.+++.+|+|.|+|.|.|.
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~----------~~L~i~~v~~~d~G~Y~C~a~n~ 72 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK----------KLYMVPYVDLEHQGTYWCHVYND 72 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCCS----------SEEEESSCCGGGCEEEEEEEECS
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCCC----------CeEEECCCCHHhCEEEEEEEEcC
Confidence 56777777788899999999999999999999999999998865432 27999999999999999999999
Q ss_pred CceEE-EEEEEEE
Q psy16863 828 FGQSI-TSCFLKL 839 (1075)
Q Consensus 828 ~G~~~-~s~~l~V 839 (1075)
.|... ..+.|.|
T Consensus 73 ~g~~~s~~~~l~V 85 (91)
T 3bfo_A 73 RDSQDSKKVEIII 85 (91)
T ss_dssp SCEEECCCEEEEE
T ss_pred CCCEEeeeEEEEE
Confidence 99754 2345554
No 495
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.30 E-value=7.5e-12 Score=110.26 Aligned_cols=89 Identities=27% Similarity=0.510 Sum_probs=76.7
Q ss_pred CCCCeeeeecCc-eeeccCCeEEEEEEEecCCCcEEEEEECCEecCCC-CcEEEEEcCCEEEEEEcccCCCCceeEEEEE
Q psy16863 347 PDAPAFIRRLHD-IAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEEN-KIYRTQHDGNFYFIDLSSVSLFDSGRWTCLA 424 (1075)
Q Consensus 347 ~~~p~~~~~~~~-~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~-~~~~~~~~g~~~~L~I~~v~~~d~G~Y~C~a 424 (1075)
..+|.|+..+.+ ..+.+|++++|.|.+ +.|.+.|+|+|||..+..+ .++.+..++..+.|.|.+++.+|+|.|+|.|
T Consensus 13 ~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 91 (104)
T 1pd6_A 13 KKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVV 91 (104)
T ss_dssp STTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEE
T ss_pred cCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEE
Confidence 357888888877 889999999999999 7888899999999999887 7888888888889999999999999999999
Q ss_pred EeCCCceeeEEEEEee
Q psy16863 425 ENAVGRSHCSCELSVL 440 (1075)
Q Consensus 425 ~n~~g~~~~s~~l~V~ 440 (1075)
|....++.|.|.
T Consensus 92 ----~~~~~~~~l~V~ 103 (104)
T 1pd6_A 92 ----GGEKCSTELFVK 103 (104)
T ss_dssp ----TTEEECCEEEEE
T ss_pred ----CCCcEEEEEEEe
Confidence 445556666664
No 496
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.30 E-value=1.4e-11 Score=109.80 Aligned_cols=93 Identities=13% Similarity=0.215 Sum_probs=74.2
Q ss_pred CCCeeeeecCceeeccCCeEEEEEEEecCCC---cEEEEEECCEec-C--CCCcEEEEE--c----CCEEEEEEcccCCC
Q psy16863 348 DAPAFIRRLHDIAVKVGTRARLLVEIRSPTE---IKIHWYRNDRKL-E--ENKIYRTQH--D----GNFYFIDLSSVSLF 415 (1075)
Q Consensus 348 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~---~~v~W~k~g~~l-~--~~~~~~~~~--~----g~~~~L~I~~v~~~ 415 (1075)
..|.|+..+.++.+.+|++++|.|.+.|.|. +.|+|||++... . ...++.+.. . .....|.|.+++.+
T Consensus 3 p~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred CccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 4678888889999999999999999999887 999999988322 1 123444331 1 12457999999999
Q ss_pred CceeEEEEEEeCCCceeeEEEEEee
Q psy16863 416 DSGRWTCLAENAVGRSHCSCELSVL 440 (1075)
Q Consensus 416 d~G~Y~C~a~n~~g~~~~s~~l~V~ 440 (1075)
|+|.|+|.|.|..|...+++.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCEEEEEEEecCCCceEEEEEEEEe
Confidence 9999999999999999988888875
No 497
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=7.7e-13 Score=119.62 Aligned_cols=100 Identities=23% Similarity=0.352 Sum_probs=84.6
Q ss_pred EEEEEecCCCCCCeeeeecCceeeccCCeEEEEEEEecCCCcEEEEEECCEecCCCCcEEEE-EcCCEEEEEEcccCCCC
Q psy16863 338 FELSVESQVPDAPAFIRRLHDIAVKVGTRARLLVEIRSPTEIKIHWYRNDRKLEENKIYRTQ-HDGNFYFIDLSSVSLFD 416 (1075)
Q Consensus 338 ~~l~V~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~-~~g~~~~L~I~~v~~~d 416 (1075)
+.|.|.. .++.|...+.+..+.+|++++|.|.+.+.|.+.++|||||..+..+.++.+. .++..+.|.|.++..+|
T Consensus 5 a~l~V~~---~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D 81 (115)
T 2cr6_A 5 SSGLVQG---RRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKD 81 (115)
T ss_dssp CCCCCCS---SCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTT
T ss_pred EEEEEcC---CCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhh
Confidence 4455653 3568888889999999999999999999999999999999999888777665 44666789999999999
Q ss_pred ceeEEEEEEeCCCceeeEEEEEeecCCC
Q psy16863 417 SGRWTCLAENAVGRSHCSCELSVLVPKA 444 (1075)
Q Consensus 417 ~G~Y~C~a~n~~g~~~~s~~l~V~~~~~ 444 (1075)
+|.|+|.+ |....++.|.|..+|.
T Consensus 82 ~G~Y~C~~----g~~~~~~~L~V~~~p~ 105 (115)
T 2cr6_A 82 SGTIYFEA----GDQRASAALRVTEKPS 105 (115)
T ss_dssp CEEEEEEE----TTEECCEEEEEECCSS
T ss_pred CEEEEEEE----CCeeEEEEEEEECCCc
Confidence 99999994 7778889999987664
No 498
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.29 E-value=3.8e-12 Score=112.53 Aligned_cols=91 Identities=21% Similarity=0.340 Sum_probs=80.0
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.||.|...+.+..+.+|+++.|.|.+.+.|.| ++|+|++..+..+.++.+... ...+.|.|.+++.+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~--- 81 (103)
T 2e7b_A 7 GPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQE-GAMLELVVRNLRPQDSGRYSCS--- 81 (103)
T ss_dssp CCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEEC-SSEEEEEECSCCTTTCCCEEEE---
T ss_pred CCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEc-CCEEEEEEccCCcccCEEEEEE---
Confidence 58888888889999999999999999999999 999999999988888888654 4577899999999999999998
Q ss_pred CCceEEEEEEEEEEecC
Q psy16863 827 DFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~~~ 843 (1075)
+|....++.|.|..++
T Consensus 82 -~g~~~~~~~l~V~~~p 97 (103)
T 2e7b_A 82 -FGDQTTSATLTVTALP 97 (103)
T ss_dssp -CSSCBCCBCEEEECCC
T ss_pred -ECCcEEEEEEEEEecc
Confidence 5667778888888754
No 499
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=3.1e-12 Score=112.01 Aligned_cols=82 Identities=16% Similarity=0.299 Sum_probs=69.7
Q ss_pred ccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEeCCceEEE
Q psy16863 754 GLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATNDFGQSIT 833 (1075)
Q Consensus 754 ~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N~~G~~~~ 833 (1075)
.+....+.+|+.+.|.|.+.|.| |.|+|+|+|..+....++.+. . ..|.|.+++.+|+|.|+|.|.|..|....
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~---~--~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 82 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT---G--EEVEVQDSVPADSGLYACVTSSPSGSDTT 82 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC---S--SEEEETTCCTTTCEEEEEEEEETTEEEEE
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE---C--CEEEEccCCHHHCEEEEEEEEeCCceEEE
Confidence 34566788999999999999987 799999999999877776654 2 27999999999999999999999999877
Q ss_pred EEEEEEEe
Q psy16863 834 SCFLKLNV 841 (1075)
Q Consensus 834 s~~l~V~~ 841 (1075)
++.|.|..
T Consensus 83 ~~~l~V~~ 90 (99)
T 2cr3_A 83 YFSVNVSD 90 (99)
T ss_dssp EEEECBCS
T ss_pred EEEEEEec
Confidence 77776654
No 500
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.29 E-value=1.1e-11 Score=109.47 Aligned_cols=91 Identities=24% Similarity=0.272 Sum_probs=80.1
Q ss_pred CCCeEEeccceeeeecCCeEEEEEEEecCCCCeEEEEECCEEeecCCcEEEEEeeCcEEEEEEccccCCCCeEEEEEEEe
Q psy16863 747 KAPKFIEGLKSCQATVNEEFKFTVQVSISPEPKVSWFRDDQQVVESDNVKILKETLGVCHLKIHALEVADQAEWKCIATN 826 (1075)
Q Consensus 747 ~~p~~~~~~~~~~~~~g~~~~l~C~v~g~p~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~A~N 826 (1075)
.||.|...+.+..+.+|+++.|.|.+ +.|.|.++|+|++..+..+.++.+.. ....+.|.|.+++.+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~--- 81 (103)
T 2dku_A 7 GANCFTEELTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRASGKHQPSQ-EGLTLRLTISALEKADSDTYTCD--- 81 (103)
T ss_dssp CCCCCSSCCCCEEEETTSEEEEEEEC-SSCCSCCEEEESSCBCCSSSSEEEEE-ETTEEEEEEESCCTTTCSEEEEE---
T ss_pred CCCEeEecCCcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEECCCCCeEEEEe-CCCEEEEEECCCCcccCEEEEEE---
Confidence 58889888999999999999999995 78999999999999999888888763 44577899999999999999998
Q ss_pred CCceEEEEEEEEEEecC
Q psy16863 827 DFGQSITSCFLKLNVPK 843 (1075)
Q Consensus 827 ~~G~~~~s~~l~V~~~~ 843 (1075)
.|....++.|.|..++
T Consensus 82 -~g~~~~~~~l~V~~~p 97 (103)
T 2dku_A 82 -IGQAQSRAQLLVQGRR 97 (103)
T ss_dssp -CSSCBCCEEEEEECSC
T ss_pred -eCCceEEEEEEEeCcc
Confidence 5777778889988754
Done!