BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16867
(275 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8IRR5|SIR4_DROME NAD-dependent protein deacetylase Sirt4 OS=Drosophila melanogaster
GN=Sirt4 PE=2 SV=2
Length = 312
Score = 281 bits (720), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 127/223 (56%), Positives = 166/223 (74%)
Query: 16 FIPKHKPVEESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQ 75
++P HKPV E DI +L+ F+ +LV+TGAGISTESGIPDYRSEGVGLYARS+ +PVQ
Sbjct: 23 YVPHHKPVVEDDIKRLEDFLLSKPNVLVLTGAGISTESGIPDYRSEGVGLYARSNHKPVQ 82
Query: 76 FQDFLKSRRVRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYK 135
+F+KS VR RYWARNFVGWP+FS+ QPNA H+AL + E E++ ++TQNVD LH K
Sbjct: 83 HMEFVKSSAVRKRYWARNFVGWPKFSATQPNATHHALARFEREERVQAVVTQNVDRLHTK 142
Query: 136 AGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEET 195
AG++ V+E+HG+ + V CL C+Y IDRH+FQ IL LNP +RPDGDVE+ E
Sbjct: 143 AGSRNVVEVHGSGYVVKCLSCEYRIDRHEFQSILASLNPAFKDAPDMIRPDGDVEIPLEY 202
Query: 196 ISKFHVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCD 238
I F +P+C C GDLKP+IVFFGD++PR R+++I +V + D
Sbjct: 203 IENFRIPECTQCGGDLKPEIVFFGDSVPRPRVDQIAGMVYNSD 245
>sp|Q8R216|SIR4_MOUSE NAD-dependent protein deacetylase sirtuin-4 OS=Mus musculus
GN=Sirt4 PE=1 SV=3
Length = 333
Score = 260 bits (665), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 121/234 (51%), Positives = 162/234 (69%)
Query: 16 FIPKHKPVEESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQ 75
F+P P++ I +L++FI K+LV+TGAGISTESGIPDYRSE VGLYAR+D+RP+Q
Sbjct: 29 FVPPSPPLDPEKIKELQRFISLSKKLLVMTGAGISTESGIPDYRSEKVGLYARTDRRPIQ 88
Query: 76 FQDFLKSRRVRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYK 135
DF++S VR RYWARNFVGWP+FSS QPN H+AL E KL +++TQNVD LH K
Sbjct: 89 HIDFVRSAPVRQRYWARNFVGWPQFSSHQPNPAHWALSNWERLGKLHWLVTQNVDALHSK 148
Query: 136 AGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEET 195
AG++++ E+HG RV+CL C + R Q+ + LNP E+Q + PDGDV ++EE
Sbjct: 149 AGSQRLTELHGCMHRVLCLNCGEQTARRVLQERFQALNPSWSAEAQGVAPDGDVFLTEEQ 208
Query: 196 ISKFHVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
+ F VP C C G LKPD+VFFGD + +++ + V+ D +LV+GSSL V
Sbjct: 209 VRSFQVPCCDRCGGPLKPDVVFFGDTVNPDKVDFVHRRVKEADSLLVVGSSLQV 262
>sp|Q1JQC6|SIR4_BOVIN NAD-dependent protein deacetylase sirtuin-4 OS=Bos taurus GN=SIRT4
PE=2 SV=1
Length = 315
Score = 257 bits (656), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 118/234 (50%), Positives = 161/234 (68%)
Query: 16 FIPKHKPVEESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQ 75
F+P P++ + +L++FI ++LV+TGAGISTESGIPDYRSE VGLYAR+D+RP+Q
Sbjct: 33 FVPPSPPLDPEKVKELQRFITLSKRLLVMTGAGISTESGIPDYRSEKVGLYARTDRRPIQ 92
Query: 76 FQDFLKSRRVRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYK 135
DF++S VR RYWARNFVGWP+FSS QPN H+AL E KL +++TQNVD LH K
Sbjct: 93 HGDFVRSAPVRQRYWARNFVGWPQFSSRQPNPAHWALSNWERLGKLHWLVTQNVDALHTK 152
Query: 136 AGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEET 195
AG++++ E+HG RV+CL C + R Q+ + LNP E+ + PDGDV ++EE
Sbjct: 153 AGSQRLTELHGCMHRVLCLDCGEQTPRGVLQERFQVLNPTWSAEAHGLAPDGDVFLTEEE 212
Query: 196 ISKFHVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
+ F VP C C G LKPD+VFFGD + +++ + V+ D +LV+GSSL V
Sbjct: 213 VQSFQVPSCSRCGGPLKPDVVFFGDTVKPDKVDFVHKRVKEADSLLVVGSSLQV 266
>sp|Q9Y6E7|SIR4_HUMAN NAD-dependent protein deacetylase sirtuin-4 OS=Homo sapiens
GN=SIRT4 PE=1 SV=1
Length = 314
Score = 257 bits (656), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 118/234 (50%), Positives = 161/234 (68%)
Query: 16 FIPKHKPVEESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQ 75
F+P P++ + +L++FI ++LV+TGAGISTESGIPDYRSE VGLYAR+D+RP+Q
Sbjct: 32 FVPASPPLDPEKVKELQRFITLSKRLLVMTGAGISTESGIPDYRSEKVGLYARTDRRPIQ 91
Query: 76 FQDFLKSRRVRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYK 135
DF++S +R RYWARNFVGWP+FSS QPN H+AL E KL +++TQNVD LH K
Sbjct: 92 HGDFVRSAPIRQRYWARNFVGWPQFSSHQPNPAHWALSTWEKLGKLYWLVTQNVDALHTK 151
Query: 136 AGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEET 195
AG++++ E+HG RV+CL C + R Q+ + LNP E+ + PDGDV +SEE
Sbjct: 152 AGSRRLTELHGCMDRVLCLDCGEQTPRGVLQERFQVLNPTWSAEAHGLAPDGDVFLSEEQ 211
Query: 196 ISKFHVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
+ F VP C C G LKPD+VFFGD + +++ + V+ D +LV+GSSL V
Sbjct: 212 VRSFQVPTCVQCGGHLKPDVVFFGDTVNPDKVDFVHKRVKEADSLLVVGSSLQV 265
>sp|Q20480|SIR41_CAEEL NAD-dependent protein deacetylase sir-2.2 OS=Caenorhabditis elegans
GN=sir-2.2 PE=2 SV=1
Length = 287
Score = 239 bits (611), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 153/237 (64%), Gaps = 3/237 (1%)
Query: 16 FIPKHKPVEESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQ 75
F+P+ + E+ + K I +K+LV++GAGISTESGIPDYRS+ VGLYAR +P+
Sbjct: 5 FVPEAAELCENSLKKFISLIGTVDKLLVISGAGISTESGIPDYRSKDVGLYARIAHKPIY 64
Query: 76 FQDFLKSRRVRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYK 135
FQD+++S R R RYW+RNF+ WPRF PN NHYAL + E +++ ++ITQNVDGLH K
Sbjct: 65 FQDYMRSNRCRQRYWSRNFLAWPRFGQAAPNINHYALSKWEASDRFQWLITQNVDGLHLK 124
Query: 136 AGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLM---IESQEMRPDGDVEMS 192
AG+K V E+HG+A +V C CDY R +Q L+ NP + E+ PDGD+ +
Sbjct: 125 AGSKMVTELHGSALQVKCTTCDYIESRQTYQDRLDYANPGFKEEHVAPGELAPDGDIILP 184
Query: 193 EETISKFHVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
T F +P+CP C G +K D+ FFG+N+ ++ V CDG+L LG+SL V
Sbjct: 185 LGTEKGFQIPECPSCGGLMKTDVTFFGENVNMDKVNFCYEKVNECDGILSLGTSLAV 241
>sp|Q20481|SIR42_CAEEL NAD-dependent protein deacetylase sir-2.3 OS=Caenorhabditis elegans
GN=sir-2.3 PE=3 SV=1
Length = 287
Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 146/237 (61%), Gaps = 3/237 (1%)
Query: 16 FIPKHKPVEESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQ 75
++P + E+ + K K + +K+L++TGAGISTESGIPDYRS+ VGLY ++ P+
Sbjct: 5 YVPHTTELCENSLKKFKSLVGTVDKLLIITGAGISTESGIPDYRSKDVGLYTKTALEPIY 64
Query: 76 FQDFLKSRRVRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYK 135
FQDF+KS++ R RYW+R+++ WPRF+ PN NHYAL + E K ++ITQNVDGLH K
Sbjct: 65 FQDFMKSKKCRQRYWSRSYLNWPRFAQALPNFNHYALSKWEAANKFHWLITQNVDGLHLK 124
Query: 136 AGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDL---MIESQEMRPDGDVEMS 192
AG+K + E+HG A +V C C+Y R +Q L NP + + D D +
Sbjct: 125 AGSKMITELHGNALQVKCTSCEYIETRQTYQDRLNYANPGFKEQFVSPGQQELDADTALP 184
Query: 193 EETISKFHVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
+ F +P+C +C G +K D+ FG+N+ +++ V C+GVL LG+SL V
Sbjct: 185 LGSEQGFKIPECLNCGGLMKTDVTLFGENLNTDKIKVCGKKVNECNGVLTLGTSLEV 241
>sp|Q8PQK3|NPD_XANAC NAD-dependent protein deacetylase OS=Xanthomonas axonopodis pv.
citri (strain 306) GN=cobB PE=3 SV=2
Length = 293
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 145/236 (61%), Gaps = 9/236 (3%)
Query: 14 ISFIPKHKPVEESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRP 73
++ +P H D + L+ FIE++ ++ V+TGAG ST+SGIPDYR G +P
Sbjct: 1 MTAVPAH------DHHTLQDFIERHQRLFVLTGAGCSTDSGIPDYRDLQGGW---KRPQP 51
Query: 74 VQFQDFLKSRRVRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLH 133
V FQ F+ R RYWAR+ VGWPRF QPNA H+AL +E +L ++TQNVD LH
Sbjct: 52 VTFQAFMGELSTRQRYWARSLVGWPRFGLAQPNATHHALAALEARGQLEVLLTQNVDRLH 111
Query: 134 YKAGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSE 193
AG++ VI++HG V C+GC+ + R +FQ +LE NP PDGD ++ +
Sbjct: 112 QAAGSQAVIDLHGRLDVVRCMGCERRMPRTEFQVLLEQANPGWAALEAAQAPDGDADLDD 171
Query: 194 ETISKFHVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
F VP CP C G LKP++VFFG+N+PR R+E+ +++ D VLV+GSSL V
Sbjct: 172 VAFEHFVVPPCPVCGGVLKPNVVFFGENVPRARVERAFAHLQAADAVLVVGSSLMV 227
>sp|Q8PDM9|NPD_XANCP NAD-dependent protein deacetylase OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=cobB PE=3 SV=1
Length = 293
Score = 211 bits (536), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 138/220 (62%), Gaps = 3/220 (1%)
Query: 30 KLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRIRY 89
L++F+E++ ++ V++GAG ST+SGIPDYR G +PV FQ F+ R RY
Sbjct: 11 ALQEFVERHQRLFVLSGAGCSTDSGIPDYRDLQGGW---KRPQPVTFQAFMGELSTRQRY 67
Query: 90 WARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHGTAF 149
WAR+ VGWPRF +PNA H+AL +E +L ++TQNVD LH AG++ VI++HG
Sbjct: 68 WARSLVGWPRFGLARPNATHHALAALEARGQLELLLTQNVDRLHQAAGSQAVIDLHGRLD 127
Query: 150 RVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCPHCHG 209
V C+GC+ + R +FQ +LE NP PDGD ++ F VP CP C G
Sbjct: 128 VVRCMGCEQRMPRTEFQLLLERDNPGWADLEAAQAPDGDADLDNVAFDNFVVPACPACGG 187
Query: 210 DLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
LKPD+VFFG+N+PR R+E+ +++ D VLV+GSSL V
Sbjct: 188 VLKPDVVFFGENVPRERVERAFAHLQAADAVLVVGSSLMV 227
>sp|Q4UZX0|NPD_XANC8 NAD-dependent protein deacetylase OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=cobB PE=3 SV=1
Length = 293
Score = 211 bits (536), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 138/220 (62%), Gaps = 3/220 (1%)
Query: 30 KLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRIRY 89
L++F+E++ ++ V++GAG ST+SGIPDYR G +PV FQ F+ R RY
Sbjct: 11 ALQEFVERHQRLFVLSGAGCSTDSGIPDYRDLQGGW---KRPQPVTFQAFMGELSTRQRY 67
Query: 90 WARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHGTAF 149
WAR+ VGWPRF +PNA H+AL +E +L ++TQNVD LH AG++ VI++HG
Sbjct: 68 WARSLVGWPRFGLARPNATHHALAALEARGQLELLLTQNVDRLHQAAGSQAVIDLHGRLD 127
Query: 150 RVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCPHCHG 209
V C+GC+ + R +FQ +LE NP PDGD ++ F VP CP C G
Sbjct: 128 VVRCMGCEQRMPRTEFQLLLERDNPGWADLEAAQAPDGDADLDNVAFDNFVVPACPACGG 187
Query: 210 DLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
LKPD+VFFG+N+PR R+E+ +++ D VLV+GSSL V
Sbjct: 188 VLKPDVVFFGENVPRERVERAFAHLQAADAVLVVGSSLMV 227
>sp|Q94AQ6|SIR4_ARATH NAD-dependent protein deacetylase SRT2 OS=Arabidopsis thaliana
GN=SRT2 PE=2 SV=1
Length = 373
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 156/260 (60%), Gaps = 20/260 (7%)
Query: 4 KVPPDVTSRSISFIPKHKPVEESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGV 63
K PP R +P P DI+KL + E+ +++ ++TGAG+STE GIPDYRS
Sbjct: 59 KAPPRFL-RDRKIVPDADPPNMEDIHKLYRLFEQSSRLTILTGAGVSTECGIPDYRSPN- 116
Query: 64 GLYARSDKRPVQFQDFLKSRRVRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSY 123
G Y+ S +P+ Q+F +S R R RYWAR++ GW RF++ QP H AL +E ++++
Sbjct: 117 GAYS-SGFKPITHQEFTRSSRARRRYWARSYAGWRRFTAAQPGPAHTALASLEKAGRINF 175
Query: 124 IITQNVDGLHYKAGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDL--MIES- 180
+ITQNVD LH++AG+ +E+HGT + VMCL C + R FQ L+ +NP IES
Sbjct: 176 MITQNVDRLHHRAGSDP-LELHGTVYTVMCLECGFSFPRDLFQDQLKAINPKWAEAIESI 234
Query: 181 ------------QEMRPDGDVEMSEETISK-FHVPQCPHCHGDLKPDIVFFGDNIPRHRM 227
+ RPDGD+E+ E+ + FH+P C C G LKPD++FFGDNIP+ R
Sbjct: 235 DHGDPGSEKSFGMKQRPDGDIEIDEKFWEEGFHIPVCEKCKGVLKPDVIFFGDNIPKERA 294
Query: 228 EKIDHLVRSCDGVLVLGSSL 247
+ + + D LVLGSSL
Sbjct: 295 TQAMEVAKQSDAFLVLGSSL 314
>sp|B0RM75|NPD_XANCB NAD-dependent protein deacetylase OS=Xanthomonas campestris pv.
campestris (strain B100) GN=cobB PE=3 SV=1
Length = 293
Score = 206 bits (524), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 137/220 (62%), Gaps = 3/220 (1%)
Query: 30 KLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRIRY 89
L++FI+++ ++ V++GAG ST+SGIPDYR G +PV FQ F+ R RY
Sbjct: 11 ALQEFIKRHQRLFVLSGAGCSTDSGIPDYRDLHGGW---KRPQPVTFQAFMGELSTRQRY 67
Query: 90 WARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHGTAF 149
WAR+ VGWPRF +PNA H+AL +E +L ++TQNVD LH AG++ VI++HG
Sbjct: 68 WARSLVGWPRFGLARPNATHHALAALEARGQLELLLTQNVDRLHQAAGSQAVIDLHGRLD 127
Query: 150 RVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCPHCHG 209
V C+GC+ + R +FQ +LE NP PDGD ++ F VP CP C
Sbjct: 128 VVRCMGCEQRMPRTEFQLLLERDNPGWADLEAAQAPDGDADLDSVAFDNFVVPACPACGC 187
Query: 210 DLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
LKPD+VFFG+N+PR R+E+ +++ D VLV+GSSL V
Sbjct: 188 VLKPDVVFFGENVPRERVERAFAHLQAADAVLVVGSSLMV 227
>sp|Q89EA6|NPD2_BRAJA NAD-dependent protein deacetylase 2 OS=Bradyrhizobium japonicum
(strain USDA 110) GN=cobB2 PE=3 SV=2
Length = 273
Score = 193 bits (491), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 136/221 (61%), Gaps = 5/221 (2%)
Query: 30 KLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRIRY 89
L+ F+ ++ ++ V+TGAG ST SGIPDYR + G + R+ +PV FQ F+ R RY
Sbjct: 10 SLQDFVARHQRLFVLTGAGCSTNSGIPDYR-DSHGNWKRT--QPVNFQAFMSEEHTRRRY 66
Query: 90 WARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHGTAF 149
WAR+ +GW RF +PN H+AL ++E N + ++TQNVD LH AG+++VI++HG
Sbjct: 67 WARSLIGWRRFGQARPNDAHHALARLEANGRCGMLLTQNVDRLHQSAGHRQVIDLHGRLD 126
Query: 150 RVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCPHCHG 209
V C+GC + R +FQ L N + + PDGD ++ S F VP C C G
Sbjct: 127 LVRCMGCGAKTPRSEFQDTLGRANAEWLALDASDAPDGDADLEHADFSSFKVPACEACGG 186
Query: 210 DLKPDIVFFGDNIPRHRMEKI-DHLVRSCDGVLVLGSSLTV 249
LKPD+VFFG+N+PR + DHL ++ D +L++GSSL V
Sbjct: 187 ILKPDVVFFGENVPRDVVATAQDHLSQA-DAMLIVGSSLMV 226
>sp|Q7WLE5|NPD_BORBR NAD-dependent protein deacetylase OS=Bordetella bronchiseptica
(strain ATCC BAA-588 / NCTC 13252 / RB50) GN=cobB PE=3
SV=1
Length = 274
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 136/224 (60%), Gaps = 3/224 (1%)
Query: 26 SDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRV 85
SD+ L+ F+ ++ V+TGAG ST SGIPDYR +G G + R K P+ FQ F+ +
Sbjct: 6 SDLQALRGFLGGSERLFVLTGAGCSTASGIPDYR-DGQGQWKR--KPPIDFQAFMGGQPA 62
Query: 86 RIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMH 145
R RYWAR+ VGW F +PNA H+AL ++ ++ ++TQNVD LH AG ++V+++H
Sbjct: 63 RARYWARSMVGWRHFGQARPNAAHHALARLAQRGQVDLLVTQNVDRLHQAAGGREVLDLH 122
Query: 146 GTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCP 205
G V C+ CD+ R +Q LE NP PDGD ++ + S+F VP CP
Sbjct: 123 GRLDEVRCMQCDWRGPRGPWQHTLELANPQWAALQAGAAPDGDADLEGQDFSRFVVPSCP 182
Query: 206 HCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
C G +KPD+VFFG+ +PR R+++ + D VLV+GSSL +
Sbjct: 183 RCGGIVKPDVVFFGETVPRERVQRAYAALEHADAVLVVGSSLML 226
>sp|Q7VX46|NPD_BORPE NAD-dependent protein deacetylase OS=Bordetella pertussis (strain
Tohama I / ATCC BAA-589 / NCTC 13251) GN=cobB PE=3 SV=1
Length = 274
Score = 187 bits (474), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 3/224 (1%)
Query: 26 SDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRV 85
SD+ L+ F+ ++ V+TGAG ST SGIPDYR +G G + R K P+ FQ F+ +
Sbjct: 6 SDLQALRGFLGGSERLFVLTGAGCSTASGIPDYR-DGQGQWKR--KPPIDFQAFMGGQPA 62
Query: 86 RIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMH 145
R RYWAR+ VGW F +PNA H+AL ++ ++ ++TQNVD LH AG ++V+++H
Sbjct: 63 RARYWARSMVGWRHFGQARPNAAHHALARLAQRGQVDLLVTQNVDRLHQAAGGREVLDLH 122
Query: 146 GTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCP 205
G V C+ CD+ R +Q LE NP PDG+ ++ + S+F VP CP
Sbjct: 123 GRLDEVRCMQCDWRGPRGPWQHTLELANPQWAALQAGAAPDGNADLEGQDFSRFVVPSCP 182
Query: 206 HCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
C G +KPD+VFFG+ +PR R+++ + D VLV+GSSL +
Sbjct: 183 RCGGIVKPDVVFFGETVPRERVQRAYAALEHADAVLVVGSSLML 226
>sp|F4P804|SIR4_BATDJ NAD-dependent protein deacetylase SIR4 OS=Batrachochytrium
dendrobatidis (strain JAM81 / FGSC 10211)
GN=BATDEDRAFT_20316 PE=3 SV=1
Length = 305
Score = 184 bits (467), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 149/239 (62%), Gaps = 21/239 (8%)
Query: 29 NKLKQFIEKYN-KILVVTGAGISTESGIPDYRSEGVGLYARS-DKRPVQFQDFLKSRRVR 86
+KL F+ +++ + +++TGAG+ST+SGIPDYR G+Y+R+ D +P+Q+Q F+ R
Sbjct: 19 SKLVDFLMRHHGQTVLLTGAGVSTDSGIPDYRGPQ-GIYSRNKDFKPIQYQQFVGPHEFR 77
Query: 87 IRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKA---GNKKVIE 143
RYWAR+F+GWP+ S QPNA+H+A+ +E ++ ITQNVDGLH +A N ++E
Sbjct: 78 QRYWARSFLGWPKVSQAQPNASHHAIAALESRSHIAGCITQNVDGLHRRAVVIENPNLLE 137
Query: 144 MHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQ-------------EMRPDGDVE 190
+HGT V C+ C Y++ R Q+ L+ +NP ++ E Q + PDGDVE
Sbjct: 138 IHGTLHWVNCISCGYKLQRSAMQEQLQKINP-IVYEWQRLNPEKSNADVASSLNPDGDVE 196
Query: 191 MSEETISKFHVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
+ + + F P CP C+G LKP++VFFG+N+P + ++ +LV+GSSL V
Sbjct: 197 IKWD-YNHFKYPHCPECNGLLKPNVVFFGENMPMTVRDTSFKMIDDAKALLVVGSSLQV 254
>sp|Q9RL35|NPD1_STRCO NAD-dependent protein deacetylase 1 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=cobB1 PE=3 SV=1
Length = 299
Score = 184 bits (466), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 132/226 (58%), Gaps = 5/226 (2%)
Query: 13 SISFIPKHK-PVEESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDK 71
++S+ P P +D+ + + + +LV++GAGISTESGIPDYR EG L S
Sbjct: 6 TLSWTPGADLPPGTTDLAPVADAL-RAGGVLVLSGAGISTESGIPDYRGEGGSL---SRH 61
Query: 72 RPVQFQDFLKSRRVRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDG 131
P+ +QDF R RYWAR+ +GW F +PNA H ++ + L+ +ITQNVDG
Sbjct: 62 TPMTYQDFTAHPEARRRYWARSHLGWRTFGRARPNAGHRSVAAFGRHGLLTGVITQNVDG 121
Query: 132 LHYKAGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEM 191
LH AG++ V+E+HG+ RV+CL C R + + LE+ N + + PDGD ++
Sbjct: 122 LHQAAGSEGVVELHGSLDRVVCLSCGVLSPRRELARRLEEANAGFSPVAAGINPDGDADL 181
Query: 192 SEETISKFHVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSC 237
++E + F V C C G LKPD+VFFG+N+P R+E LVR
Sbjct: 182 TDEQVGDFRVVPCAVCGGVLKPDVVFFGENVPPRRVEHCRELVRGA 227
>sp|Q8FUC8|NPD1_COREF NAD-dependent protein deacetylase 1 OS=Corynebacterium efficiens
(strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC
100395) GN=cobB1 PE=3 SV=2
Length = 281
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 133/231 (57%), Gaps = 9/231 (3%)
Query: 24 EESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSR 83
E + + + + +E +L VTGAG+ST+SGIPDYRS L + RP+ +Q+F
Sbjct: 3 EGAALEGVVKLLEA-GSVLAVTGAGVSTDSGIPDYRSPRGSL---NQGRPMTYQEFRFDP 58
Query: 84 RVRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIE 143
RYWAR+FVGW + QPN HYAL ++E LS I+TQNVDGLH +AG++ ++
Sbjct: 59 VASHRYWARSFVGWRVMADAQPNRTHYALVELERAGLLSGIVTQNVDGLHRRAGSENLVA 118
Query: 144 MHGTAFRVMCLGCDYEIDRHKFQKILEDLNP----DLMIESQEMRPDGDVEMSEETISKF 199
+HG ++CL C + R L+ LNP + ++ + PDGDV + + + +F
Sbjct: 119 LHGDLATIVCLQCGHREARELLDARLDHLNPGYFDSIALDPSAVNPDGDVTLDDHHVQRF 178
Query: 200 HVPQCPHCHGD-LKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
+ C C LKPD+V+FG+ +P R ++ L+ D V+V GSSL V
Sbjct: 179 TMAGCARCGSVLLKPDVVYFGEPVPSIRKTRVAQLLDGADAVVVAGSSLAV 229
>sp|Q882K4|NPD3_PSESM NAD-dependent protein deacetylase 3 OS=Pseudomonas syringae pv.
tomato (strain DC3000) GN=cobB3 PE=3 SV=1
Length = 281
Score = 171 bits (433), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 126/208 (60%), Gaps = 6/208 (2%)
Query: 42 LVVTGAGISTESGIPDYR-SEGVGLYARSDKRPVQFQDFLKSRRVRIRYWARNFVGWPRF 100
LVVTGAGIST SGIPDYR +GV R +P+ +Q+F+ + R RYWAR +GWPR
Sbjct: 23 LVVTGAGISTASGIPDYRDKDGV----RRGAQPMMYQEFVGNPAARQRYWARAMLGWPRI 78
Query: 101 SSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHGTAFRVMCLGCDYEI 160
S+ Q NA H AL ++ + +ITQNVD LH +AG++ VIE+HG+ RV+CL C
Sbjct: 79 SASQANAAHRALAALQAENLIKGLITQNVDALHTQAGSQDVIELHGSLHRVLCLDCQQRS 138
Query: 161 DRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCPHCHGD-LKPDIVFFG 219
DR Q+ + N L PDGD + + F VP+CPHC G LKPD+VFFG
Sbjct: 139 DRTAIQEQMLAHNLYLADVHATQAPDGDTLLDPAYEAGFKVPECPHCQGKRLKPDVVFFG 198
Query: 220 DNIPRHRMEKIDHLVRSCDGVLVLGSSL 247
+N+ H + V +G+LV+G+SL
Sbjct: 199 ENVASHTAARATLSVEQAEGLLVVGTSL 226
>sp|A0QDH4|NPD1_MYCA1 NAD-dependent protein deacetylase 1 OS=Mycobacterium avium (strain
104) GN=cobB1 PE=3 SV=1
Length = 282
Score = 171 bits (433), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 120/215 (55%), Gaps = 12/215 (5%)
Query: 40 KILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRIRYWARNFVGWPR 99
+I V+TGAGIST+SGIPDYR P+ + F R RYWARN VGW
Sbjct: 19 RIAVLTGAGISTDSGIPDYRGP-----ESPPSNPMTIRQFTGDPAFRQRYWARNHVGWRH 73
Query: 100 FSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHGTAFRVMCLGCDYE 159
PNA H AL +ED ++ +ITQNVD LH KAG++ VI++HG+ RV+CLGC
Sbjct: 74 MDDTLPNAGHRALAALEDAAVVTGVITQNVDLLHTKAGSRNVIDLHGSYARVICLGCGDT 133
Query: 160 IDRHKFQKILEDLNPDLM-----IESQEMRPDGDVEMSEETISKFHVPQCPHCHGDLKPD 214
R + LE LNP + I + PD D ++E + F C C G LKPD
Sbjct: 134 TSRAALAERLEALNPGFIERTEAIGGLAVAPDADAVVAET--ASFRYVDCARCAGMLKPD 191
Query: 215 IVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
IV+FG+++P+ + L+ D +LV GSSLTV
Sbjct: 192 IVYFGESVPKDVVAAAYRLIDESDTLLVAGSSLTV 226
>sp|A9UVV1|SIR4_MONBE NAD-dependent protein deacetylase SIR4 OS=Monosiga brevicollis
GN=15984 PE=3 SV=1
Length = 308
Score = 168 bits (425), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 128/230 (55%), Gaps = 10/230 (4%)
Query: 25 ESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRR 84
+ I L F+ ++ + V+TGAGIST+SGIPDYRS G R RP+Q +FL S
Sbjct: 32 QEGIKLLSAFLLRHEPVCVLTGAGISTDSGIPDYRSPG-----RPPHRPLQHLEFLGSHE 86
Query: 85 VRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEM 144
+ RYWAR+ G+PR PN H A+ +++ + IITQNVDGLH +AG++ VI++
Sbjct: 87 RQQRYWARSLYGYPRIRDTMPNVGHQAINELQRRGLVGAIITQNVDGLHQRAGSQHVIDL 146
Query: 145 HGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLM-----IESQEMRPDGDVEMSEETISKF 199
HG +V C+ C R + Q L N L+ + + +RPDGD + E+ +F
Sbjct: 147 HGRLDQVKCMNCHSITTRDELQSRLLADNKALLDQFSVVHDEAVRPDGDAVLDEDLYGRF 206
Query: 200 HVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
V C C G LKP++VFFG ++ +++ V + V+G+SL
Sbjct: 207 TVAACASCGGVLKPNVVFFGGSLDPEDVKRASTAVSEASALFVVGTSLAT 256
>sp|Q4QB33|SIR4_LEIMA NAD-dependent protein deacetylase SIR2rp2 OS=Leishmania major
GN=SIR2rp2 PE=3 SV=1
Length = 320
Score = 151 bits (382), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 127/250 (50%), Gaps = 34/250 (13%)
Query: 31 LKQFIEKYNK------ILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRR 84
L F+E+ + +V+TGAG STESGIPDYR G Y R+D + FQ F++
Sbjct: 7 LASFLERCSARKRGRGCVVLTGAGCSTESGIPDYRGPN-GQYHRADFVLLTFQKFMRDDN 65
Query: 85 VRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLH----------- 133
+ RYWAR+ +G+ NA H AL+ + +++I+TQNVDGLH
Sbjct: 66 EKRRYWARSMLGYSTMCGASCNAAHMALQAFTKSGAVAHILTQNVDGLHHLATYGGVGDA 125
Query: 134 -------YKAGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLM----IESQE 182
Y + + E+HG V+C C + + R + Q+ L + NP +
Sbjct: 126 EEEHYYKYTTSDAPLKELHGNIHNVICTSCGFFMPRARLQRELRERNPGFYEQYGADVSR 185
Query: 183 MRPDGDVEMSEETISKFHVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVR---SCDG 239
RPDGD E ++ H+ CP C+G KP +V FG+N+P+ +E LVR SC
Sbjct: 186 TRPDGDYSAPTEAVNAMHLVMCPRCNGFFKPHVVLFGENVPKPIVEATMSLVRDKASC-- 243
Query: 240 VLVLGSSLTV 249
+L LG+SL V
Sbjct: 244 LLCLGTSLQV 253
>sp|Q57YZ9|SIR4_TRYB2 NAD-dependent protein deacetylase SIR2rp2 OS=Trypanosoma brucei
brucei (strain 927/4 GUTat10.1) GN=SIR2rp2 PE=3 SV=1
Length = 306
Score = 147 bits (371), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 126/245 (51%), Gaps = 25/245 (10%)
Query: 29 NKLKQFIEK--YNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVR 86
++L FI++ + +++TGAG STESG+PDYR GLY R + P+ Q FL R
Sbjct: 3 DRLAIFIKQCGLQRCVILTGAGCSTESGVPDYRGPN-GLYRRPNFVPLTRQVFLSGSEHR 61
Query: 87 IRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLH------------- 133
RYWAR+ G+ S N H L ++ ++ ++TQNVDGLH
Sbjct: 62 KRYWARSMFGYNTVSGASCNDTHMGLYELYRAGVVNRLLTQNVDGLHHLAAHGGTGSKTV 121
Query: 134 -----YKAGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLM----IESQEMR 184
Y + N V+E+HG +V C+ C R + Q+ L + N L E E+R
Sbjct: 122 EAYAKYTSSNSGVLELHGNIHQVCCMQCGDVSPRRRLQQRLCEANYQLCRDYEAEFSEVR 181
Query: 185 PDGDVEMSEETISKFHVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLG 244
PDGD E+ + + + C HC G LKP +V FG+N+P+ + + VR+ ++ LG
Sbjct: 182 PDGDYEVPDRVVQAMQLVCCEHCGGLLKPHVVLFGENVPKECVREAYTAVRAASCLICLG 241
Query: 245 SSLTV 249
+SL V
Sbjct: 242 TSLQV 246
>sp|B5YJW3|NPD_THEYD NAD-dependent protein deacetylase OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=cobB PE=3 SV=1
Length = 256
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 29/222 (13%)
Query: 28 INKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRI 87
I+K + I+K + TGAGISTESGIPD+RS GL+ R R V +Q+F+ R+ R
Sbjct: 9 ISKTYELIKKSTYSVAFTGAGISTESGIPDFRSPN-GLWQRF--RIVTYQEFIIDRKARN 65
Query: 88 RYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHGT 147
+W + +PN H AL ++E L Y+ITQN+DGLH AGNK VIE+HG
Sbjct: 66 EFWKMKRELIQEIINAKPNNAHNALAELEKRGLLKYVITQNIDGLHQMAGNKSVIELHGN 125
Query: 148 AFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCPHC 207
+CL C+ + K+L++ DL +C C
Sbjct: 126 QRGYICLDCEKVYPLEEVLKMLKEQELDL--------------------------RCEVC 159
Query: 208 HGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
G +KP IVFFG+ +P + + CD + V+G+SL V
Sbjct: 160 GGIIKPTIVFFGEPMPEKELLMAQQIANKCDIMFVIGTSLQV 201
>sp|Q8R984|NPD2_THETN NAD-dependent protein deacetylase 2 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=cobB2 PE=3 SV=1
Length = 250
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 110/221 (49%), Gaps = 31/221 (14%)
Query: 30 KLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRIRY 89
K + I+ K +V+TGAGISTESGIPD+RS G GL+ D V L + +
Sbjct: 12 KAAELIKSSQKTMVLTGAGISTESGIPDFRSPGTGLWENMDPTEVLSTKVLFNSPEE--F 69
Query: 90 WARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHGTAF 149
+ F + +PN HY L +ME ++ +ITQN+D LH KAG+KKV E+HG
Sbjct: 70 YRVGFKILSSMRNAEPNEAHYILSEMEKEGIIAGVITQNIDNLHQKAGSKKVYEVHGNTR 129
Query: 150 RVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHV-PQCPHCH 208
CL C ++ E+ EE ++K + P+C C
Sbjct: 130 EGSCLRCGEKV---------------------------SFELLEEKVAKEEIPPRCDRCG 162
Query: 209 GDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
G L+PD+V FGD +P H + V+ D ++V+GSSL V
Sbjct: 163 GMLRPDVVLFGDPMP-HAFDLALKEVQESDLLIVIGSSLVV 202
>sp|Q9UZE7|NPD_PYRAB NAD-dependent protein deacylase OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=cobB PE=3 SV=1
Length = 250
Score = 121 bits (303), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 39/253 (15%)
Query: 28 INKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRI 87
I ++ + + + TGAGIS ESG+P +R + GL+ + RP + R
Sbjct: 2 IVEVARVLASSKNAIAFTGAGISAESGVPTFRGKD-GLW--NKYRPEELATPEAFARNPK 58
Query: 88 RYWARNFVGW--PRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMH 145
W F W + +PN HYAL ++ED L +ITQNVD LH +AG + +IE+H
Sbjct: 59 LVW--EFYKWRINKILKAKPNPAHYALVELEDMGILRAVITQNVDDLHREAGTRNLIELH 116
Query: 146 GTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCP 205
G FRV C C+++ + + ESQ + E + K +P+CP
Sbjct: 117 GNIFRVKCTKCNFK---------------EYLKESQRL----------EEVLKEDLPKCP 151
Query: 206 HCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSS------LTVPILVKEHAKG 259
C L+PD+V+FG+ +PR +++ L D VLV+G+S +P +VKE G
Sbjct: 152 RCGSLLRPDVVWFGEPLPREELDRAFKLAEKADAVLVVGTSGLVYPAAYIPYIVKESG-G 210
Query: 260 YLGKGNVQTTPFS 272
+ + NV+ + +
Sbjct: 211 TVIEVNVEESAIT 223
>sp|Q6N6U0|NPD_RHOPA NAD-dependent protein deacetylase OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=cobB PE=3 SV=1
Length = 253
Score = 120 bits (302), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 110/243 (45%), Gaps = 37/243 (15%)
Query: 21 KPVEESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFL 80
P S + +L I + I+ TGAGISTESGIPD+RS G GL++R+ +P+ F +F+
Sbjct: 3 APSLSSGVEQLGDMIAHASSIVPFTGAGISTESGIPDFRSPG-GLWSRN--QPIPFDEFV 59
Query: 81 KSRRVRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAG--N 138
+ R W R F F+ +P H AL + K+ IITQN+D LH +G
Sbjct: 60 ARQDARDEAWRRRFAMEQTFAKARPARGHRALASLYKAGKVPAIITQNIDNLHQVSGFAE 119
Query: 139 KKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISK 198
V+E+HG C+GC RH+ + E
Sbjct: 120 HDVVELHGNTTYARCIGCG---KRHELDWVREWF-----------------------FRT 153
Query: 199 FHVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV------PIL 252
H P C C +K V FG ++P M + L + CD + +GSSL V P+L
Sbjct: 154 GHAPHCTACDEPVKTATVSFGQSMPSDAMRRATELAQHCDLFIAIGSSLVVWPAAGFPML 213
Query: 253 VKE 255
KE
Sbjct: 214 AKE 216
>sp|Q89LY4|NPD1_BRAJA NAD-dependent protein deacetylase 1 OS=Bradyrhizobium japonicum
(strain USDA 110) GN=cobB1 PE=3 SV=1
Length = 254
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 110/230 (47%), Gaps = 40/230 (17%)
Query: 26 SDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRV 85
S + +L I + I+ TGAGISTE GIPD+RS G G++ R+ RP+ F F+ S+
Sbjct: 10 SGVERLGDMIAEAKTIVPFTGAGISTECGIPDFRSPG-GIWTRN--RPIPFDGFVASQEA 66
Query: 86 RIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAG--NKKVIE 143
R W R F F++ +P H AL + K+ +ITQN+D LH +G ++ VIE
Sbjct: 67 RDESWRRRFAMEETFAAARPGRGHRALASLYRAGKVPAVITQNIDNLHQASGFAHEHVIE 126
Query: 144 MHGTAFRVMCLGC--DYEID--RHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKF 199
+HG C+GC Y++D + +F + DG
Sbjct: 127 LHGNTTYARCVGCGQTYQLDWVKRRFDQ------------------DG------------ 156
Query: 200 HVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
P C C +K + FG +P M++ L R+CD + +GSSL V
Sbjct: 157 -APNCTVCDEPVKTATISFGQMMPEEEMQRATALSRACDLFIAIGSSLVV 205
>sp|Q8TWG0|NPD_METKA NAD-dependent protein deacylase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=cobB PE=3
SV=1
Length = 250
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 32/221 (14%)
Query: 28 INKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRI 87
+ + + + + ++V+TGAG S +SGIP +R + GL+ + D R + + ++
Sbjct: 3 LREAAERVVEAETVVVLTGAGASADSGIPTFRGKD-GLWNKYDPRELATPEAFARDPEKV 61
Query: 88 RYWARNFVGWPR--FSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMH 145
W W R + +PN H L +ME + L +ITQNVDGLH +AG+++VIE+H
Sbjct: 62 WEWYL----WRRRKIAEAEPNPAHTVLARMERDGLLEAVITQNVDGLHQRAGSRRVIELH 117
Query: 146 GTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCP 205
G +R C+ C+Y Q++ D E E P+CP
Sbjct: 118 GNIWRDECVSCEY-------QRV------------------NDPERGEGLEYDELPPRCP 152
Query: 206 HCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSS 246
C L+P +V+FG+ +P + + ++L RSCD +LV+G+S
Sbjct: 153 ECGDPLRPGVVWFGEPLPSDALVEAENLARSCDVMLVIGTS 193
>sp|Q5KZE8|NPD2_GEOKA NAD-dependent protein deacetylase 2 OS=Geobacillus kaustophilus
(strain HTA426) GN=cobB2 PE=3 SV=1
Length = 247
Score = 117 bits (294), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 110/224 (49%), Gaps = 37/224 (16%)
Query: 28 INKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRI 87
I +L Q+I++ N I V+TGAG+STESGIPD+RSE GLYA+ D ++ ++ +
Sbjct: 4 IRQLAQWIKEANTIAVLTGAGMSTESGIPDFRSEN-GLYAQEDNVEYYLSEYY-YKKDPV 61
Query: 88 RYWAR--NFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMH 145
+W R F PN H L+ +E+ K I+TQN+DGLH KAG+ VIE+H
Sbjct: 62 DFWRRFKRMFSLKMMGGFAPNDGHRFLRWLEEMGKTVTILTQNIDGLHTKAGSTNVIELH 121
Query: 146 GTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCP 205
GT C C + D I++ VP+C
Sbjct: 122 GTLQTATCPSCGNKYDL-------------------------------SFINRHEVPRCE 150
Query: 206 HCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
C +KPD+V FG +P RME+ + D +L +G+SL V
Sbjct: 151 KCQTIVKPDVVLFGGLVP--RMEEAFAAAAASDLLLAMGTSLEV 192
>sp|Q88BY5|NPD_PSEPK NAD-dependent protein deacylase OS=Pseudomonas putida (strain
KT2440) GN=cobB PE=3 SV=1
Length = 262
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 35/229 (15%)
Query: 26 SDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRV 85
S++ + + + + ++ TGAGIS +SGIP +R + GL+A+ D + ++ D ++
Sbjct: 2 SNLRRAAEALRRSKTVVFFTGAGISADSGIPTFRDKLTGLWAKHDPQRLETADAFRANPT 61
Query: 86 RIRYWARNFVGWPR--FSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIE 143
+ W W R S +PN+ H ++ Q+ D ++TQN+D LH +AG+ V+
Sbjct: 62 LVWSWYL----WRRHQVSQAKPNSAHLSIPQLADAGWDVSVVTQNIDDLHERAGSSPVVH 117
Query: 144 MHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLM---IESQEMRPDGDVEMSEETISKFH 200
+HG+ V C GC +L+PD + +E Q + P
Sbjct: 118 LHGSLMDVKCFGCHRP----------AELSPDQLAVPLEGQLIEP--------------- 152
Query: 201 VPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
P+C C+G L+P +V+F +N+P + LVR+CD ++ +G+S V
Sbjct: 153 -PRCTRCNGRLRPGVVWFRENLPDNAWRSAVRLVRACDLLVSVGTSGVV 200
>sp|Q5JG47|NPD_PYRKO NAD-dependent protein deacylase OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=cobB PE=3 SV=1
Length = 257
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 109/224 (48%), Gaps = 37/224 (16%)
Query: 42 LVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRIRYWARNFVGWP--R 99
+ TGAGIS ESGIP +R GL+ + + K R + F W +
Sbjct: 16 IAFTGAGISAESGIPTFRGRN-GLWKTYRAEELATPEAFK----RDPHLVWEFYKWRMRK 70
Query: 100 FSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHGTAFRVMCLGCDYE 159
+PN H AL ++E+ L +ITQNVD LH +AG++KV+E+HG FRV C+ C Y
Sbjct: 71 ILKAEPNPAHKALAELENMGVLKAVITQNVDDLHREAGSRKVVELHGNIFRVRCVSCSYR 130
Query: 160 IDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCPHCHGDLKPDIVFFG 219
+ + ++ E + +E+ P+CP C L+PD+V+FG
Sbjct: 131 ENLKESGRVFE------FVREKEL------------------PKCPKCGSLLRPDVVWFG 166
Query: 220 DNIPRHRMEKIDHLVRSCDGVLVLGSS------LTVPILVKEHA 257
+ +PR +E+ L D VLV+G+S VP +VKE
Sbjct: 167 EPLPREALEEAFSLAERADVVLVVGTSGVVYPAAYVPYIVKERG 210
>sp|O58669|NPD_PYRHO NAD-dependent protein deacylase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=cobB PE=3 SV=1
Length = 249
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 121/250 (48%), Gaps = 39/250 (15%)
Query: 28 INKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRI 87
+ ++ + + ++ TGAGIS ESGIP +R + GL+ + RP + R
Sbjct: 2 MAEVARVLASSKNVIAFTGAGISAESGIPTFRGKD-GLWKKY--RPEELATPEAFERNPK 58
Query: 88 RYWARNFVGW--PRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMH 145
W +F W + +PN HYAL ++E L +ITQNVD LH +AG K +IE+H
Sbjct: 59 LVW--DFYKWRIKKILKAKPNPAHYALVELEKMGILKAVITQNVDDLHREAGTKNLIELH 116
Query: 146 GTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCP 205
G FRV C C++ + +I E L+ DL P+CP
Sbjct: 117 GNIFRVRCTSCEFREHLKESGRIDEILSEDL-------------------------PKCP 151
Query: 206 HCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSS------LTVPILVKEHAKG 259
C L+PD+V+FG+ +P + + L + D V+V+G+S +P +VK+ G
Sbjct: 152 KCGSLLRPDVVWFGEPLPSKELNEAFKLAKEADVVIVVGTSGLVYPAAYIPYIVKDSG-G 210
Query: 260 YLGKGNVQTT 269
+ + NVQ +
Sbjct: 211 VVIEINVQKS 220
>sp|Q8U1Q1|NPD_PYRFU NAD-dependent protein deacylase OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=cobB PE=3 SV=2
Length = 250
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 125/253 (49%), Gaps = 39/253 (15%)
Query: 28 INKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRI 87
+ ++ + + K + + TGAGIS ESGIP +R + GL+ + + + K R ++
Sbjct: 2 LGEVSKILAKSSMAIAFTGAGISAESGIPTFRGKD-GLWRKYRAEELATPEAFK-RDPKL 59
Query: 88 RYWARNFVGW--PRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMH 145
+ F W + +PN H AL ++E + +ITQNVD LH +AG+K VIE+H
Sbjct: 60 VW---EFYKWRIKKILEAKPNPAHIALAELEKMGIIKAVITQNVDDLHREAGSKNVIELH 116
Query: 146 GTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCP 205
G FRV C C Y ++ L++ + + SQE+ P+CP
Sbjct: 117 GNIFRVKCTSCSY-------REYLKESDRIGWLLSQEL------------------PRCP 151
Query: 206 HCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV------PILVKEHAKG 259
C L+PD+V+FG+ +P + L + D VLV+G+S V P +VKE G
Sbjct: 152 KCGSLLRPDVVWFGEALPEKELTTAFSLAKKADVVLVVGTSGVVYPAAYIPYIVKESG-G 210
Query: 260 YLGKGNVQTTPFS 272
+ + N++ + +
Sbjct: 211 IVVEINIEPSAIT 223
>sp|C6A243|NPD_THESM NAD-dependent protein deacylase OS=Thermococcus sibiricus (strain
MM 739 / DSM 12597) GN=cobB PE=3 SV=1
Length = 255
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 33/223 (14%)
Query: 41 ILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRIRYWARNFVGWPRF 100
++ TGAG+S ESGIP +R G GL+ V + R+ W+ +
Sbjct: 15 LIAFTGAGVSAESGIPTFRDRG-GLWENYRIEEVATPEAF--RKDPNLVWSFYKMRMKIM 71
Query: 101 SSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHGTAFRVMCLGCDYEI 160
+PN H AL ++E L +ITQN+D LH +AGN+ ++E+HG +RV C CDY
Sbjct: 72 KGAKPNNAHLALAELEKMGILKAVITQNIDNLHREAGNQHIVELHGNIYRVKCTRCDY-- 129
Query: 161 DRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCPHCHGDLKPDIVFFGD 220
+E+L +ES ++ E+ + + ++P+CP C L+PD+V+FG+
Sbjct: 130 --------MENL-----LESGKL---------EDFLKEKNLPKCPECASLLRPDVVWFGE 167
Query: 221 NIPRHRMEKIDHLVRSCDGVLVLGSSLT------VPILVKEHA 257
+P+ ++K L D LV+G+S VP +VK++
Sbjct: 168 PLPQEALQKAFKLAERADVCLVVGTSAQVFPAAYVPYIVKDNG 210
>sp|Q8ZU41|NPD1_PYRAE NAD-dependent protein deacetylase 1 OS=Pyrobaculum aerophilum
(strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC
100827) GN=cobB1 PE=3 SV=1
Length = 254
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 32/223 (14%)
Query: 27 DINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVR 86
+++++ I + + + +TGAG+ST SGIPD+R G++ R D + F +
Sbjct: 9 ELDEVASLIARSSCNVALTGAGVSTASGIPDFRGPQ-GVWRRVDPEKFEISYFYNNPDEV 67
Query: 87 IRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHG 146
+ + + P F+ +PN HYAL +ME KL +ITQNVD LH AG+K VIE+HG
Sbjct: 68 WDLFVKYLL--PAFN-VKPNPAHYALAEMERLGKLCAVITQNVDRLHQAAGSKNVIELHG 124
Query: 147 TAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCPH 206
+C C K+ + E+ + R G P+CP
Sbjct: 125 ALEYAVCTNCG-----SKYA----------LAEALKWRKSG-------------APRCPK 156
Query: 207 CHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
C G +KPD+VFFG+ +P+ + + L + + +G+SL V
Sbjct: 157 CGGVIKPDVVFFGEPLPQDALREAFMLAEMAEVFMAIGTSLAV 199
>sp|Q9WYW0|NPD_THEMA NAD-dependent protein deacetylase OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=cobB PE=1
SV=1
Length = 246
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 127/250 (50%), Gaps = 39/250 (15%)
Query: 30 KLKQFIEKYNK---ILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVR 86
K+K+F++ N+ + +TGAGIST SGIPD+R G+Y + + DF S
Sbjct: 2 KMKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPN-GIYKKYSQNVFDI-DFFYSHPEE 59
Query: 87 IRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHG 146
+A+ + +P + +PN H L ++E+ + +ITQN+D LH +AG+KKVIE+HG
Sbjct: 60 FYRFAKEGI-FPMLQA-KPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHG 117
Query: 147 TAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCPH 206
C+ C+ ++ + +++ L ES + VP C
Sbjct: 118 NVEEYYCVRCE---KKYTVEDVIKKL------ESSD------------------VPLCDD 150
Query: 207 CHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV-PI----LVKEHAKGYL 261
C+ ++P+IVFFG+N+P+ + + L ++VLGSSL V P L+ + G L
Sbjct: 151 CNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKL 210
Query: 262 GKGNVQTTPF 271
N+ TPF
Sbjct: 211 VIVNLGETPF 220
>sp|Q97MB4|NPD_CLOAB NAD-dependent protein deacetylase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=cobB PE=3 SV=1
Length = 245
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 108/226 (47%), Gaps = 36/226 (15%)
Query: 28 INKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRI 87
IN+LK+ + + + I+ GAG+STES IPD+RSE GLY K + +
Sbjct: 7 INELKKIVAESSSIVFFGGAGVSTESNIPDFRSEN-GLYKT--KNNFSYPPEVMLSHTFF 63
Query: 88 RYWARNFVGWPR----FSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIE 143
+ +F + R F +PNA HY+L ++E+ KL I+TQN+DGLH AG+K V E
Sbjct: 64 KNHTEDFFEFYREKMIFKDAKPNAAHYSLAKIEEQGKLKAIVTQNIDGLHQLAGSKNVYE 123
Query: 144 MHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQ 203
+HG+ R C+ C D K SE TI P+
Sbjct: 124 LHGSIHRNYCMDCGKSFDLEYVIK------------------------SETTI-----PK 154
Query: 204 CPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
C C G +KPD+V + + + ++ + D ++V G+SL V
Sbjct: 155 CDKCGGIVKPDVVLYEEGLDDSIIQNSVKAISEADTLIVGGTSLVV 200
>sp|Q8XNS6|NPD_CLOPE NAD-dependent protein deacetylase OS=Clostridium perfringens
(strain 13 / Type A) GN=cobB PE=3 SV=1
Length = 244
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 116/230 (50%), Gaps = 45/230 (19%)
Query: 28 INKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQ-DFLKSRRVR 86
INKLK+ I+ N I+ GAG+STESGIPD+RS GL+ ++K + F + L S
Sbjct: 5 INKLKEIIKNSNNIVFFGGAGVSTESGIPDFRSAN-GLF--NEKLNITFTPEQLVSHSFF 61
Query: 87 IRYWARNFVGWPR---FSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIE 143
RY F + + + +PN H AL ++E+ KL I+TQN+DGLH AG+K V E
Sbjct: 62 ERYPEEFFNFYKAKLIYPNSKPNDAHIALAKLEEMGKLKAIVTQNIDGLHQMAGSKNVFE 121
Query: 144 MHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQ 203
+HG+ R C+ C H F + ++ES+ VP+
Sbjct: 122 LHGSVLRNYCVDC------HTF------YDEKFILESK------------------GVPK 151
Query: 204 CPHCHGDLKPDIVFF----GDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
C C G +KPD+V + DN+ R ++ I D +++ G+SL V
Sbjct: 152 CTKCGGIVKPDVVLYEEPLDDNVIRGAIDAI----SKADTLIIGGTSLVV 197
>sp|A9SDL4|SIR5_PHYPA NAD-dependent protein deacylase OS=Physcomitrella patens subsp.
patens GN=SRT1505 PE=3 SV=1
Length = 323
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 114/237 (48%), Gaps = 40/237 (16%)
Query: 28 INKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDK-----------RPVQF 76
+ + + K++V+TGAGIS ESGIP +R EG GL+ D P
Sbjct: 37 VEEFSSVFQHAKKVVVLTGAGISAESGIPTFRGEG-GLWRDFDATELATPGAFAANPSLV 95
Query: 77 QDFLKSRRVRIRYWARNFVGWPRFSSFQPNANHYALKQMEDN----EKLSYIITQNVDGL 132
+F RR + + PNA HYA+ ++ K ++TQN+DGL
Sbjct: 96 WEFYHYRRTIV-------------AGASPNAGHYAVAALQRRCRRLGKDFILLTQNIDGL 142
Query: 133 HYKAGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMS 192
H KAG+ V+E+HG+ + C C ++ ++ I L+ + PD +
Sbjct: 143 HAKAGSTDVVELHGSLWETRCCHCK-AVEANRNMPICPALD-------GKGAPD---TVH 191
Query: 193 EETISKFHVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
E I +P+C C+G L+P +++FG+ + R + + D ++ CD +LV+G+S V
Sbjct: 192 EANIPSMQLPRCNKCNGLLRPRVIWFGECLERDVLRRTDDALQGCDLLLVVGTSAVV 248
>sp|Q8F3Z6|NPD_LEPIN NAD-dependent protein deacylase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601) GN=cobB
PE=3 SV=1
Length = 246
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 123/240 (51%), Gaps = 50/240 (20%)
Query: 31 LKQFI----EKYNKILVVTGAGISTESGIPDYR-SEGVGLYARSDKRPVQFQDFLKSRRV 85
+K+FI +K+ KI ++GAGIS ESGIP +R SEG+ R++ Q F K+ ++
Sbjct: 1 MKEFITKHRDKFQKISAISGAGISAESGIPTFRGSEGLWKNFRAEDLATP-QAFSKNPKL 59
Query: 86 RIRY--WARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIE 143
+ W RN + R PN H+AL ++E ++ITQNVDGLH +AG+KK+ E
Sbjct: 60 VWEWYLWRRNIIETKR-----PNPGHFALVELERIHPDFFLITQNVDGLHSQAGSKKLTE 114
Query: 144 MHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHV-- 201
+HG F C+ C E S+ETIS+
Sbjct: 115 IHGNIFINRCISCGQE--------------------------------SKETISENTTPL 142
Query: 202 -PQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGS--SLTVPILVKEHAK 258
PQC +C+ L+P +V+FG++ ++ ++ D +LVLG+ S+++P+ + + AK
Sbjct: 143 PPQCQNCNSFLRPGVVWFGESYDDFKLNLSIQRMKHTDLLLVLGTSGSVSMPVYLAQIAK 202
>sp|Q9YB13|NPD_AERPE NAD-dependent protein deacylase OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=cobB PE=3 SV=2
Length = 245
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 45/236 (19%)
Query: 42 LVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQF-QDFLKSRRVRIRYWARNFVGWPRF 100
+ TGAGIS ESGIP +R + GL++R D R + + F + R+ +++ R
Sbjct: 18 VAFTGAGISAESGIPTFRGKD-GLWSRFDPRDLATPEAFNRDPRLVWEWYSWRI---ERV 73
Query: 101 SSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHGTAFRVMCLGCDYEI 160
+ +PN H L ++ED+ L +ITQNVDGLH +AG+++V+E+HG R C C ++
Sbjct: 74 LAAKPNKAHRLLARLEDSGVLKAVITQNVDGLHRRAGSRRVLELHGNVLRARCTRCGSKL 133
Query: 161 DRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCPHCHGDLKPDIVFFGD 220
+ + L P CP C G L+PD+V+FG+
Sbjct: 134 EWREKPSNLP-------------------------------PSCPRCGGVLRPDVVWFGE 162
Query: 221 NIPRHRMEKIDHLVRSCDGVLVLGSSLTV------PILVKEHAKGYLGKGNVQTTP 270
+ +E+ L R D ++++G+S V P+ KE + NV P
Sbjct: 163 PLDTSLLEEAFGLARRSDVMIIIGTSGAVDPAGLLPLAAKESGATLI---NVNPEP 215
>sp|Q72RR0|NPD_LEPIC NAD-dependent protein deacylase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=cobB PE=3 SV=1
Length = 246
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 123/240 (51%), Gaps = 50/240 (20%)
Query: 31 LKQFI----EKYNKILVVTGAGISTESGIPDYR-SEGVGLYARSDKRPVQFQDFLKSRRV 85
+K+FI +K+ KI ++GAGIS ESGIP +R SEG+ R++ Q F K+ ++
Sbjct: 1 MKEFITKHRDKFQKISAISGAGISAESGIPTFRGSEGLWKNFRAEDLATP-QAFSKNPKL 59
Query: 86 RIRY--WARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIE 143
+ W RN + R PN H+AL ++E ++ITQNVDGLH +AG+KK+ E
Sbjct: 60 VWEWYLWRRNIIETKR-----PNPGHFALVELERIHPDFFLITQNVDGLHSQAGSKKLTE 114
Query: 144 MHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHV-- 201
+HG F C+ C E S+ETIS+
Sbjct: 115 IHGNIFINRCISCGQE--------------------------------SKETISENTTPL 142
Query: 202 -PQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGS--SLTVPILVKEHAK 258
PQC +C+ L+P +V+FG++ ++ ++ D +LVLG+ S+++P+ + + AK
Sbjct: 143 PPQCQNCNSFLRPGVVWFGESYDDFKLNFSIQRMKHTDLLLVLGTSGSVSMPVYLAQIAK 202
>sp|O30124|NPD2_ARCFU NAD-dependent protein deacylase 2 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=cobB2 PE=1 SV=1
Length = 253
Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 112/226 (49%), Gaps = 32/226 (14%)
Query: 25 ESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRR 84
E +I K + + K +V TGAGIS ESGIP +R E GL+ + D P + +R
Sbjct: 2 EDEIRKAAEILAKSKHAVVFTGAGISAESGIPTFRGED-GLWRKYD--PEEVASISGFKR 58
Query: 85 VRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEM 144
+W + + + +PN HYA+ ++E + +ITQN+D LH +AG+++V+E+
Sbjct: 59 NPRAFWEFSMEMKDKLFA-EPNPAHYAIAELERMGIVKAVITQNIDMLHQRAGSRRVLEL 117
Query: 145 HGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQC 204
HG+ ++ CL C D +F +ED N K +P+C
Sbjct: 118 HGSMDKLDCLDCHETYDWSEF---VEDFN------------------------KGEIPRC 150
Query: 205 PHCHG-DLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV 249
C +KP +V FG+ +P+ + + + CD +V+GSSL V
Sbjct: 151 RKCGSYYVKPRVVLFGEPLPQRTLFEAIEEAKHCDAFMVVGSSLVV 196
>sp|Q8R9N6|NPD1_THETN NAD-dependent protein deacylase 1 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=cobB1 PE=3 SV=1
Length = 242
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 120/256 (46%), Gaps = 48/256 (18%)
Query: 27 DINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVR 86
D LK+ + + N +V+TGAGIS ESGIP +R E GL+ + + + +
Sbjct: 2 DFKILKEKLPQSNLTVVLTGAGISKESGIPTFRGED-GLWKKYNPEELATPWAFQRNPAL 60
Query: 87 IRYW---ARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIE 143
+ W R + S +PN H + + E+ K +ITQNVDGLH AG+ VIE
Sbjct: 61 VWEWYDYRRRII-----SKAKPNKCHLLIAEFEERFKNVRVITQNVDGLHEAAGSTNVIE 115
Query: 144 MHGTAFRVMCLGCDYE-IDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVP 202
+HG ++V C CD+ I+R E +SK P
Sbjct: 116 LHGNIWKVKCTKCDFRGINR------------------------------EVPLSKIP-P 144
Query: 203 QCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV------PILVKEH 256
+CP C ++PD+V+FG+ +P ++ + L + D +V+G+SL V P L E
Sbjct: 145 ECPKCGSIVRPDVVWFGEPLPSDKLTEAMELSQRADLFIVIGTSLMVQPAASLPFLALER 204
Query: 257 AKGYLGKGNVQTTPFS 272
++ + + + TP S
Sbjct: 205 G-AFVVEVSPEETPLS 219
>sp|Q9NXA8|SIR5_HUMAN NAD-dependent protein deacylase sirtuin-5, mitochondrial OS=Homo
sapiens GN=SIRT5 PE=1 SV=2
Length = 310
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 42/285 (14%)
Query: 7 PDVTSRSISFIPKHKPVEESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLY 66
P ++R+ + +P S + ++F K I++++GAG+S ESG+P +R G G Y
Sbjct: 21 PPASTRNQICLKMARP--SSSMADFRKFFAKAKHIVIISGAGVSAESGVPTFR--GAGGY 76
Query: 67 ARSDKRPVQFQDFLK--------SRRVRIRYWARNFVGWPRFSSFQPNANHYALKQMED- 117
R Q QD SR ++ R +G S +PNA H A+ + E
Sbjct: 77 WRK----WQAQDLATPLAFAHNPSRVWEFYHYRREVMG-----SKEPNAGHRAIAECETR 127
Query: 118 ---NEKLSYIITQNVDGLHYKAGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNP 174
+ +ITQN+D LH KAG K ++E+HG+ F+ C C + +K +P
Sbjct: 128 LGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYK--------SP 179
Query: 175 DLMIESQEMRPDGDVEMSEETISKFHVPQCPH--CHGDLKPDIVFFGDNIPRHRMEKIDH 232
S + P+ + + + K +P+C C G L+P +V+FG+N+ +E++D
Sbjct: 180 ICPALSGKGAPEPGTQDASIPVEK--LPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDR 237
Query: 233 LVRSCDGVLVLG-SSLTVPILV---KEHAKGY-LGKGNVQTTPFS 272
+ CD LV+G SS+ P + + A+G + + N +TTP +
Sbjct: 238 ELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPAT 282
>sp|O67919|NPD_AQUAE NAD-dependent protein deacylase OS=Aquifex aeolicus (strain VF5)
GN=cobB PE=3 SV=1
Length = 239
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 119/241 (49%), Gaps = 46/241 (19%)
Query: 41 ILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQF-QDFLKSRRVRIRY--WARNFVGW 97
I+ +TGAGIS ESGIP +R + GL+ + + + F ++ ++ + W R +
Sbjct: 6 IVTLTGAGISAESGIPTFRGKD-GLWNKFKPEELATPEAFFRNPKLVWEWYDWKRQLI-- 62
Query: 98 PRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHGTAFRVMCLGCD 157
+ QPN H L +ME+ Y+ITQNVDGLH +AG+KKVIE+HG ++V C+ C
Sbjct: 63 ---AKAQPNEGHKILTKMEEEFPNFYLITQNVDGLHQRAGSKKVIELHGNIWKVRCVECG 119
Query: 158 YEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCPHCHGDLKPDIVF 217
E R+++ L ++ P+C C G L+P +V+
Sbjct: 120 NE--RYEYTTPLPEIP----------------------------PKCEKCGGLLRPGVVW 149
Query: 218 FGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV------PILVKEHAKGYLGKGNVQTTPF 271
FG+++P + + L R +V+G+S V P + KE+ + + N + TP
Sbjct: 150 FGESLPVDALSRAYELSREAHVFIVVGTSGVVYPAAELPFVAKENGAQVI-EVNPEETPI 208
Query: 272 S 272
+
Sbjct: 209 T 209
>sp|Q7P1B9|NPD_CHRVO NAD-dependent protein deacetylase OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=cobB PE=3 SV=1
Length = 244
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 119/262 (45%), Gaps = 56/262 (21%)
Query: 25 ESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRR 84
E + L+Q ++ +I V+TGAG+STESGIPD+RS GL++R D +
Sbjct: 5 ERQLQYLRQLVDGARRIAVLTGAGMSTESGIPDFRSAD-GLWSR---------DMSLTDA 54
Query: 85 VRIRYWARNFVG-WPRF---------SSFQPNANHYALKQMEDNEKLSYIITQNVDGLHY 134
V + Y+ R+ W F +QPN H L +E + K I+TQN+DGLH
Sbjct: 55 VSVDYFRRDPAAFWRAFRDIFHIKLVGDYQPNDGHRFLAALEASGKEVTILTQNIDGLHG 114
Query: 135 KAGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEE 194
+AG+++V+E+HGT C PD +
Sbjct: 115 RAGSRRVLELHGTLLTASC-------------------------------PDCRSPHPLD 143
Query: 195 TISKFHVPQCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTVP---I 251
+ + +P C C LKPD+V +G+ +P ++ + + +LV+GSSL V +
Sbjct: 144 YVQRHELPACRRCGAALKPDVVLYGEAVP--LIDVAFQAALNAELLLVMGSSLEVSPVNL 201
Query: 252 LVKEHAKGYLGKGNVQTTPFSF 273
+ E A+ + + TP F
Sbjct: 202 IPVEAARAGIPCALINYTPTRF 223
>sp|Q67KQ0|NPD_SYMTH NAD-dependent protein deacetylase OS=Symbiobacterium thermophilum
(strain T / IAM 14863) GN=cobB PE=3 SV=1
Length = 251
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 110/248 (44%), Gaps = 36/248 (14%)
Query: 28 INKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKSRRVRI 87
I + ++ + +TGAG STESG+PD+RS GL+ D PV RR +
Sbjct: 5 IQDFARALQASRYAVALTGAGASTESGLPDFRSN-TGLW--KDVDPVSLISMTALRRRPV 61
Query: 88 RYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVIEMHGT 147
++ + + QPN H L ++ L +ITQNVDGLH AG+ VIE+HG+
Sbjct: 62 DFYRFYRMRFSHLWGAQPNPVHKVLAALQREGLLKRLITQNVDGLHQAAGSPDVIELHGS 121
Query: 148 AFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVPQCPHC 207
CL C P +I DVE+ E +P+CP C
Sbjct: 122 LRECQCLRCGRRF-------------PSRLI---------DVEVETEA----DIPRCPEC 155
Query: 208 HGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV------PILVKEHAKGYL 261
G LKP +V F + +P +E D LV+GSSL V P+L +H G L
Sbjct: 156 GGVLKPGVVLFEEALPADAIEAAIEAAMKADLFLVVGSSLEVGPANQLPVLAVQHG-GRL 214
Query: 262 GKGNVQTT 269
N+ T
Sbjct: 215 AIFNLTPT 222
>sp|Q4JBN2|NPD_SULAC NAD-dependent protein deacetylase OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=cobB PE=3 SV=2
Length = 252
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 116/255 (45%), Gaps = 42/255 (16%)
Query: 23 VEESDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDKRPVQFQDFLKS 82
VEE+ K+ + I + TGAGIST SGIPD+R GL+ + + F K
Sbjct: 4 VEEA--KKVAEMILSSVNAIAFTGAGISTASGIPDFRGPQ-GLWKKYSPELASIEYFQKY 60
Query: 83 RRVRIRYWARNFVGWPRFSSFQPNANHYALKQMEDNEKLSYIITQNVDGLHYKAGNKKVI 142
+W +PN HYAL Q+E + +ITQNVDGLH AG++ VI
Sbjct: 61 PDA---FWQFYSTRMKSLFEAKPNRAHYALAQLEKMGLIKAVITQNVDGLHSVAGSRNVI 117
Query: 143 EMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDVEMSEETISKFHVP 202
E+HG + C C D + +E G+V +P
Sbjct: 118 ELHGNMRKSYCTSCLRSYDSLEVLARVE---------------KGEV-----------IP 151
Query: 203 QCPHCHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLGSSLTV------PILVKEH 256
+C C G LKPD+V FG+ P H + + + D VL +GSSLTV P++VK +
Sbjct: 152 RC-ECGGILKPDVVLFGE--PVHGIYEAMRIANESDLVLAIGSSLTVYPANQIPLIVKRN 208
Query: 257 AKGYLGKGNVQTTPF 271
G + N + TP+
Sbjct: 209 GGGLIIL-NGEETPY 222
>sp|Q3ZBQ0|SIR5_BOVIN NAD-dependent protein deacylase sirtuin-5, mitochondrial OS=Bos
taurus GN=SIRT5 PE=2 SV=1
Length = 310
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 48/270 (17%)
Query: 26 SDINKLKQFIEKYNKILVVTGAGISTESGIPDYRSEGVGLYARSDK------------RP 73
S++ ++ K I+V++GAGIS ESG+P +R G G Y R K P
Sbjct: 38 SNMADFRKCFAKAKHIVVISGAGISAESGVPTFR--GAGGYWRKWKAQDLATPQAFARNP 95
Query: 74 VQFQDFLKSRRVRIRYWARNFVGWPRFSSFQPNANHYALKQMED----NEKLSYIITQNV 129
Q +F RR ++ S +PNA H A+ + + + +ITQN+
Sbjct: 96 SQVWEFYHYRREVVQ-------------STEPNAGHLAIAECQARLHRQGRQVVVITQNI 142
Query: 130 DGLHYKAGNKKVIEMHGTAFRVMCLGCDYEIDRHKFQKILEDLNPDLMIESQEMRPDGDV 189
D LH KAG K ++E+HG+ F+ C C + +K +P S + PD
Sbjct: 143 DELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYK--------SPICPALSGKGAPDPQT 194
Query: 190 EMSEETISKFHVPQCPH--CHGDLKPDIVFFGDNIPRHRMEKIDHLVRSCDGVLVLG-SS 246
+ + + K +P+C C G L+P +V+FG+N+ +E++D + CD LV+G SS
Sbjct: 195 QDAGIPVEK--LPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDKELALCDLCLVVGTSS 252
Query: 247 LTVPILV---KEHAKGY-LGKGNVQTTPFS 272
+ P + + A+G + + N++TTP +
Sbjct: 253 VVYPAAMFAPQVSARGVPVAEFNMETTPAT 282
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,792,068
Number of Sequences: 539616
Number of extensions: 4625914
Number of successful extensions: 12764
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 12191
Number of HSP's gapped (non-prelim): 288
length of query: 275
length of database: 191,569,459
effective HSP length: 116
effective length of query: 159
effective length of database: 128,974,003
effective search space: 20506866477
effective search space used: 20506866477
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)