BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16874
(227 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|193631931|ref|XP_001951558.1| PREDICTED: thymidylate kinase-like isoform 3 [Acyrthosiphon pisum]
gi|193631933|ref|XP_001951544.1| PREDICTED: thymidylate kinase-like isoform 2 [Acyrthosiphon pisum]
gi|193631935|ref|XP_001951524.1| PREDICTED: thymidylate kinase-like isoform 1 [Acyrthosiphon pisum]
gi|328724839|ref|XP_003248266.1| PREDICTED: thymidylate kinase-like [Acyrthosiphon pisum]
Length = 212
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/226 (47%), Positives = 144/226 (63%), Gaps = 20/226 (8%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M RGA IV EGCDRSGKTTQ KLV+ LN IP++ ++FPDR+ G +I++YL
Sbjct: 1 MTKSAMRGALIVLEGCDRSGKTTQCAKLVEALNNMKIPAKKISFPDRSTPIGSLINDYLS 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+KIELPD++ HLLFSANRWE EP + K IE G+TL + DRYS+S
Sbjct: 61 RKIELPDRSVHLLFSANRWELEPEIRKQIESGVTLIV-----------------DRYSYS 103
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GV F++AK+ +D WC PE GLPKPD V+ KL+ + +R GFGDERYE +FQ KV
Sbjct: 104 GVVFTSAKQCVDFKWCCGPENGLPKPDIVMFLKLSIGEMAKRSGFGDERYENIEFQNKVD 163
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIV---IDTIKKSQFSPL 223
NY+K K++ +I +DA +D+ L + + V IDT+K + L
Sbjct: 164 INYDKFKNDNFIQVDAAQDVSILTNTLLEQVLKTIDTVKNQELDDL 209
>gi|119113986|ref|XP_314179.3| AGAP005260-PA [Anopheles gambiae str. PEST]
gi|116128380|gb|EAA09514.4| AGAP005260-PA [Anopheles gambiae str. PEST]
Length = 211
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/223 (49%), Positives = 142/223 (63%), Gaps = 19/223 (8%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
SQ RGAFIV EGCDR+GKTTQ K LVD L + NI +Q++NFPDR+ G +I+ YL +K
Sbjct: 4 SQGKRGAFIVLEGCDRTGKTTQCKTLVDKLMQVNIRAQYMNFPDRSTQCGQLINGYLTRK 63
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+ D+ HLLF+ NRWER + KL++ G+ L + DRYS+SGV
Sbjct: 64 DDFTDEGIHLLFTLNRWERMKEMEKLLKAGVNLIV-----------------DRYSYSGV 106
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
AFS+AK G+D+ WC PE GL KPD V+L L+ +AL RR GFGDERYE FQ+KV E
Sbjct: 107 AFSSAK-GLDMEWCKAPESGLLKPDLVILLTLSMDALARRGGFGDERYEVAGFQKKVIER 165
Query: 183 YEKLKDN-IWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
Y LKD+ W IDADK D + ++ + V+ I+ S PLE
Sbjct: 166 YGMLKDDRYWKAIDADKTFDDVTAVLYEEVLRAIEHSGDKPLE 208
>gi|291221635|ref|XP_002730837.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 211
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 136/223 (60%), Gaps = 17/223 (7%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M + RGA IV EGCDR GK+TQA+KLVD L P++ FP+R+ S G +I YL
Sbjct: 1 MNGVVRRGALIVLEGCDRCGKSTQARKLVDTLVAGGTPAELWRFPERSSSIGQLIGSYLE 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
KK E+ D A HLLFSANRWE P + KL++ G T+ + DRY++S
Sbjct: 61 KKSEVEDHAIHLLFSANRWESVPRMRKLLQDGTTVVV-----------------DRYAYS 103
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GVAF+AAKEG DI WC QP++GLP+PD VL + E +R FG ERYEQTDFQ++VA
Sbjct: 104 GVAFTAAKEGFDIEWCKQPDRGLPEPDLVLYLTIGAEDAAKRADFGGERYEQTDFQKRVA 163
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ Y L+++ W +DA + I L + + D I + + P+
Sbjct: 164 DMYGLLREDRWETLDASQSIKDLHDQIAKLTRDIITRVENKPI 206
>gi|443697237|gb|ELT97772.1| hypothetical protein CAPTEDRAFT_132783 [Capitella teleta]
Length = 218
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 133/216 (61%), Gaps = 21/216 (9%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M+ RGA IV EGCDRSGKTTQ +KLVD LN + IP+Q FP+R + G ++ +YL
Sbjct: 1 MSRIARRGALIVLEGCDRSGKTTQCRKLVDALNTDGIPAQLWRFPERDTAIGQVVSDYLE 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+K EL D A HLLFSANRWE P + + ++ G TL I DRY+FS
Sbjct: 61 RKCELDDHAVHLLFSANRWELVPKMLETLKNGTTLVI-----------------DRYAFS 103
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GVAFSAAKE +D WC + + GLP+PD +L L EA +R +G ERYEQ FQ++VA
Sbjct: 104 GVAFSAAKESLDFEWCKKSDVGLPRPDLILYLNLGVEAAAQRSEYGGERYEQKPFQKRVA 163
Query: 181 ENYEKLKDNIWIDIDADKDI----DTLGLIVKDIVI 212
ENY L D+ W IDA K I D L IVK+ V+
Sbjct: 164 ENYAALMDDDWKVIDAAKGINELHDELKSIVKNFVL 199
>gi|157116910|ref|XP_001652904.1| Thymidylate kinase, putative [Aedes aegypti]
gi|108883432|gb|EAT47657.1| AAEL001246-PA [Aedes aegypti]
Length = 249
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 137/218 (62%), Gaps = 19/218 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EGCDR+GKTTQ K++V+ LN ++F+NFPDR+ G +I+ YL K
Sbjct: 46 RGALIVLEGCDRAGKTTQCKRIVESLNSAGHKAKFMNFPDRSTQFGALINSYLTSKDNFT 105
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+A HLLF+ NRWE + + +L+ G+TL + DRYS+SGVAFSA
Sbjct: 106 DEAIHLLFTLNRWEAKNEMERLLRSGVTLIV-----------------DRYSYSGVAFSA 148
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+++ WC PE GLPKPD VLL L EA+ +R GFG ERYE + Q+KV E + L
Sbjct: 149 AK-GLNMDWCKAPETGLPKPDLVLLLTLTAEAMAKRGGFGQERYEVPELQKKVMEKFHTL 207
Query: 187 K-DNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
K D+ W +DADK D L L + ++V+D+++ PL
Sbjct: 208 KDDSYWKVVDADKKEDALSLELCEMVLDSMESCSDKPL 245
>gi|390346478|ref|XP_789676.2| PREDICTED: thymidylate kinase-like [Strongylocentrotus purpuratus]
gi|390358306|ref|XP_784160.2| PREDICTED: thymidylate kinase-like [Strongylocentrotus purpuratus]
Length = 214
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 142/205 (69%), Gaps = 17/205 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA +VFEGCDRSGK+TQ KKLV+ + + + ++ + FP+R+ G +ID YL+ ++
Sbjct: 3 RGALVVFEGCDRSGKSTQCKKLVESMLEKGMKAELMRFPERSTVIGKLIDSYLKNSKDVQ 62
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE +P + + + +G+TL + DRY++SGVAF+A
Sbjct: 63 DNAIHLLFSANRWELKPEMERKLNEGVTLVV-----------------DRYAYSGVAFTA 105
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKEG+ ++WC +P+ GLP PD VL K++ EA ++R GFG+ERYE+++ Q +VA+N+EKL
Sbjct: 106 AKEGISLNWCKRPDVGLPLPDLVLFLKVSSEAAEKRGGFGEERYEKSEIQARVAKNFEKL 165
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIV 211
++N W I+AD+ ++ + ++++V
Sbjct: 166 QENDWEIINADQSMEDVQKQIQNVV 190
>gi|303277967|ref|XP_003058277.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460934|gb|EEH58228.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 214
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 134/219 (61%), Gaps = 19/219 (8%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MAS + RGAFI+FEG DR GKTTQ+ KLV+ L + + ++ +PDRT S G +I+ YL+
Sbjct: 1 MASLVARGAFILFEGVDRCGKTTQSTKLVEALKSSGVNAELWRYPDRTTSMGQMINSYLQ 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
K E+ D A HLLF+ANRWE+ + + +G+TL + DRYS+S
Sbjct: 61 SKTEMDDGAIHLLFAANRWEKRAAMEAKLAEGVTLVV-----------------DRYSYS 103
Query: 121 GVAFSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRK 178
GVAF+AAK G+D+ WC PE GL +PDAVL + EA R GFG+ERYE +D Q+
Sbjct: 104 GVAFTAAKGIPGLDLEWCKSPEVGLLRPDAVLYLNMPVEAAAARGGFGEERYETSDLQKA 163
Query: 179 VAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
V N++KL+++ W +DA +D + + + D + K
Sbjct: 164 VRANFDKLREDWWTIVDATGTVDEVHAACRAVADDAVAK 202
>gi|443429410|gb|AGC92695.1| thymidylate kinase-like protein [Heliconius erato]
Length = 212
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 137/220 (62%), Gaps = 18/220 (8%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGAFIV EG DR+GKTTQAKKLV+ L +P++++NFPDR G +I+ YL K +
Sbjct: 7 LKRGAFIVIEGVDRTGKTTQAKKLVESLKNKQVPAEYMNFPDRKTDIGEVINSYLTSKND 66
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L ++A HLLFSANRWE+ + + I G+T+ + DRY FSGVA+
Sbjct: 67 LSNEAIHLLFSANRWEKVNYVKEKILNGVTVIV-----------------DRYCFSGVAY 109
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
SAAK G+D+SWC P+ GLPKPD V F L E +Q+R GFG ERYE +FQ+KV Y
Sbjct: 110 SAAK-GLDLSWCKSPDAGLPKPDKVFFFTLPLEHVQQRNGFGSERYEVPEFQKKVTATYM 168
Query: 185 KLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
KLK++ W +DA + ++ + + + V+ + P+E
Sbjct: 169 KLKEDNWDMLDASRSLEVIHKELVEKVLSVVDGVDNKPIE 208
>gi|307202789|gb|EFN82074.1| Thymidylate kinase [Harpegnathos saltator]
Length = 209
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 142/219 (64%), Gaps = 19/219 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EGCDR+GK+TQ K L + LN+ +IP++ FP+R G +++ +L K+I +P
Sbjct: 5 RGALIVLEGCDRAGKSTQVKLLTNALNERSIPTKASAFPNRNTPIGGLLNGFLSKEINIP 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+AAHLLFSANRWE + + K++ G TL I DRY+ SG A++A
Sbjct: 65 PEAAHLLFSANRWECKEDIEKMLLSGTTLVI-----------------DRYASSGTAYTA 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
A G ++WC QP+ GLPKPD V+L K+++ + R +G+ER+EQ D Q +V+ NYEKL
Sbjct: 108 ANTGRCLNWCKQPDLGLPKPDCVMLLKVSKHQQELRNNWGEERFEQNDLQVRVSANYEKL 167
Query: 187 KDNIWIDIDADKDIDTL-GLIVKDIVIDTIKKSQFSPLE 224
KD+ W+ +DAD+++ T+ G I+K + I++ QF +E
Sbjct: 168 KDDTWMTVDADQNVLTIHGEILKK-ALSVIQEVQFRRIE 205
>gi|242014820|ref|XP_002428083.1| thymidylate kinase, putative [Pediculus humanus corporis]
gi|212512602|gb|EEB15345.1| thymidylate kinase, putative [Pediculus humanus corporis]
Length = 601
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 123/196 (62%), Gaps = 34/196 (17%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
GA IVFEGCDR+GKTTQ KKLV+ LN+ I SQF+ FP+ +L D
Sbjct: 416 GALIVFEGCDRAGKTTQCKKLVEKLNELGIKSQFMQFPE-----------------DLND 458
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
Q HLLFSANRWE +P + KL+ + +TL + DRYSFSGVA+SAA
Sbjct: 459 QTVHLLFSANRWENQPKMVKLLHEEVTLIV-----------------DRYSFSGVAYSAA 501
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLK 187
K GMD WC++PE GLPKPD V L + L++R GFG+ERYE DFQ+ V +NY K+K
Sbjct: 502 KPGMDFKWCYKPEIGLPKPDLVFLLYVPVNVLKKRIGFGEERYENNDFQQSVFDNYIKMK 561
Query: 188 DNIWIDIDADKDIDTL 203
D+ W IDA K+I+ +
Sbjct: 562 DDTWHLIDASKNINEI 577
>gi|170032238|ref|XP_001843989.1| thymidylate kinase [Culex quinquefasciatus]
gi|167872105|gb|EDS35488.1| thymidylate kinase [Culex quinquefasciatus]
Length = 210
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 19/210 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EGCDR+GKTTQ K++V++L ++ ++F+NFPDR+ G +I+ YL K
Sbjct: 7 RGALIVLEGCDRAGKTTQCKRIVEHLTQSGRKAKFMNFPDRSTDCGKLINSYLTNKDNFT 66
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HLLF+ NRWE + +L++ G TL + DRYS+SGVAFS+
Sbjct: 67 DEGIHLLFTLNRWEARKQMEQLLQDGTTLIV-----------------DRYSYSGVAFSS 109
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D+ WC PE GL KPD V+L L EAL +R GFG+ERYE +FQR+V + +L
Sbjct: 110 AK-GLDMEWCKAPEAGLLKPDLVILLTLTAEALAKRGGFGEERYEVPEFQRRVMGKFAEL 168
Query: 187 KDNI-WIDIDADKDIDTLGLIVKDIVIDTI 215
+D+ W IDADK D L + + ++V+ TI
Sbjct: 169 RDDTYWRQIDADKGQDELTVELSELVLGTI 198
>gi|261335952|emb|CBH09285.1| putative thymidylate kinase [Heliconius melpomene]
Length = 208
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 136/220 (61%), Gaps = 18/220 (8%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGAFIV EG DR+GKTTQAKKLV+ L + ++++NFPDR G +I+ YL K +
Sbjct: 3 LKRGAFIVIEGVDRTGKTTQAKKLVESLKNKQVSAEYMNFPDRKTDIGEVINSYLTSKND 62
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L ++A HLLFSANRWE+ + + + GIT+ + DRY FSGVA+
Sbjct: 63 LSNEAIHLLFSANRWEKVNYIKEKLLNGITVIV-----------------DRYCFSGVAY 105
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
SAAK G+D+SWC P+ GLPKPD V F L E +Q+R GFG ERYE +FQ+KV Y
Sbjct: 106 SAAK-GLDLSWCKSPDAGLPKPDKVFFFTLPLEHVQQRNGFGSERYEVPEFQKKVTNTYM 164
Query: 185 KLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
KLK++ W +DA + ++ + + + V+ + P+E
Sbjct: 165 KLKEDNWDMLDASRSLEVIHKELVEKVLSVVDSVDNKPIE 204
>gi|383865532|ref|XP_003708227.1| PREDICTED: putative thymidylate kinase 251L-like [Megachile
rotundata]
Length = 212
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 138/219 (63%), Gaps = 17/219 (7%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEGCDR+GK+TQ K L++ L K NIP++ FPDRT TG +I+ +L K+E
Sbjct: 3 VGRGALIVFEGCDRAGKSTQVKMLIEALKKRNIPTEARAFPDRTTPTGTLINNFLCNKLE 62
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
LP + HLLFSANRWE + + K ++ G+T+ I DRY+ SG A+
Sbjct: 63 LPPETTHLLFSANRWEVKEDIIKSLQNGVTVII-----------------DRYAGSGAAY 105
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AA G ++WC + +KGLP PD V+L K++E+ R +G ERYE ++FQ++VA NYE
Sbjct: 106 TAALSGKCLTWCKEADKGLPSPDLVILLKVSEKTQCSRSNWGSERYENSEFQKRVALNYE 165
Query: 185 KLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KL + W IDA+ + + V V++T++K + P+
Sbjct: 166 KLIEKTWSSIDANGETLEIHSQVLKQVLNTVQKVKNLPI 204
>gi|308805831|ref|XP_003080227.1| thymidylate kinase family protein (ISS) [Ostreococcus tauri]
gi|116058687|emb|CAL54394.1| thymidylate kinase family protein (ISS) [Ostreococcus tauri]
Length = 1006
Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats.
Identities = 90/215 (41%), Positives = 136/215 (63%), Gaps = 19/215 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA ++FEG DR GK+TQA++LV L + + ++ +PDRT TG +ID YLR + +
Sbjct: 358 RGALVLFEGADRCGKSTQARRLVKTLEQRGVRAELWRYPDRTTKTGEMIDAYLRSESDTA 417
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLF+ANRWE++ + + + G+TL DRYS+SG AF+A
Sbjct: 418 DAAIHLLFAANRWEKKALMERKLADGVTL-----------------VCDRYSYSGCAFTA 460
Query: 127 AK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK EG+D++WC PE GLP+PDA++ +L+ E RR GFG+ERYE T+ QR V E +E
Sbjct: 461 AKGVEGLDLTWCKAPEVGLPRPDALMYLELSLEDAARRGGFGEERYETTEMQRAVKEMFE 520
Query: 185 KLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
+++ W IDA++D + + V +I + I++++
Sbjct: 521 SMREPWWDVIDANRDEEVIEREVLEIALGAIERAK 555
>gi|342320529|gb|EGU12469.1| Deoxythymidylate kinase Thymidylate kinase [Rhodotorula glutinis
ATCC 204091]
Length = 228
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 129/201 (64%), Gaps = 22/201 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIVFEG DRSGK+TQ ++LVD LN + ++ FPDRT+STG +ID YL +K +L
Sbjct: 12 RGAFIVFEGLDRSGKSTQVQRLVDALNARGVQTKGARFPDRTLSTGKMIDSYLSQKADLD 71
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+A HLLFSANRWER + + + G+T+ DRY+FSG+AFSA
Sbjct: 72 DRAIHLLFSANRWERASQILEDLRNGVTV-----------------VCDRYAFSGIAFSA 114
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
K G+ +WC P+ GLP+PD VL +++ E Q+R GFG ERYE ++ Q KV + + KL
Sbjct: 115 IK-GLSWNWCRAPDVGLPQPDLVLFLRVSPEVAQQRGGFGQERYETSEVQAKVEKAFTKL 173
Query: 187 KD----NIWIDIDADKDIDTL 203
++W +IDADK +D +
Sbjct: 174 GQSVGKDVWTEIDADKGVDEV 194
>gi|348513456|ref|XP_003444258.1| PREDICTED: thymidylate kinase-like [Oreochromis niloticus]
Length = 249
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 130/220 (59%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GKTTQ KLV L ++ P++ + FPDRT + G +I YL K +L
Sbjct: 37 RGALIVLEGVDRAGKTTQCSKLVQALQQSGRPAEMMRFPDRTTTIGQLIGAYLENKSDLE 96
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE P + K +EQGITL + DRY+FSGVAF++
Sbjct: 97 DHTVHLLFSANRWEMVPLMKKKLEQGITLVV-----------------DRYAFSGVAFTS 139
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G + WC QP+ GLPKPD V+ +LN R FG ERYE + FQR V + +E+L
Sbjct: 140 AKPGFRLDWCMQPDVGLPKPDLVMFLQLNPAEAALRGQFGQERYETSVFQRTVQQRFEQL 199
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W IDA ++I+ + + ++ I K+Q PL
Sbjct: 200 MKDQTVNWQVIDAAQNIENVHRDITAHSLNAINKAQNLPL 239
>gi|307188610|gb|EFN73327.1| Thymidylate kinase [Camponotus floridanus]
Length = 209
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 135/218 (61%), Gaps = 17/218 (7%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EGCDR+GK+TQ K L++ LN IP++ + FP+R G I+D +L KKI +P
Sbjct: 5 RGALIVLEGCDRAGKSTQMKMLINALNDLRIPAENIAFPNRKTPVGSILDSFLSKKINVP 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ AHLLFSANRWE + + K + G+TL + DRY+ SG ++A
Sbjct: 65 PETAHLLFSANRWECKEDMEKTLLSGVTLIV-----------------DRYAASGAVYTA 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
A G ++WC QP+ GLPKPD V+ K+++ ++R +G ER+E +FQ++V NYEKL
Sbjct: 108 ANTGRSLNWCQQPDLGLPKPDCVMFLKVSKRQQEQRSDWGKERFEHDEFQQRVNANYEKL 167
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
+D+ WI I+AD+D + + + + I++ Q+ +E
Sbjct: 168 RDDTWITINADQDESAVHSEILRMALSVIQEIQYRNIE 205
>gi|198417043|ref|XP_002128464.1| PREDICTED: similar to deoxythymidylate kinase [Ciona intestinalis]
Length = 209
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 133/220 (60%), Gaps = 17/220 (7%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI 63
++ RGA IV EG DRSGKTTQ +KL+ LN+ N + + FPDRT G I+ YL KK
Sbjct: 2 KVGRGALIVVEGLDRSGKTTQCQKLITALNEKNQKVKLLKFPDRTTEIGKTINSYLVKKS 61
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
L D+A HLLFSANRWE+ + + + G+TL + DRY++SG A
Sbjct: 62 NLDDRAIHLLFSANRWEKRSEMLQDLNDGVTLIV-----------------DRYAYSGAA 104
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
FSAAK+G+++ WC P+ GLP+PD VL +L+ R G+G+ERYE T+FQ+KVA N+
Sbjct: 105 FSAAKKGLELDWCKSPDSGLPQPDLVLFLELSTSVAATRGGYGEERYETTEFQKKVALNF 164
Query: 184 EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
LK W IDA +D+ + + V T++K + P+
Sbjct: 165 HGLKTEEWKVIDAGRDMFEVHQDMLSFVEKTMEKVKLQPV 204
>gi|156380955|ref|XP_001632032.1| predicted protein [Nematostella vectensis]
gi|156219082|gb|EDO39969.1| predicted protein [Nematostella vectensis]
Length = 214
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 130/219 (59%), Gaps = 17/219 (7%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA I FEGCDRSGK+TQ++ LVDYL + + FPDR+ + G I+ YL+ EL
Sbjct: 6 RGALICFEGCDRSGKSTQSRLLVDYLRSLGTNIEHMRFPDRSTAIGQCINSYLQGTSELD 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE + L+ G T+ + DRY+FSGVAF++
Sbjct: 66 DHAIHLLFSANRWESVSKIRSLLNTGTTIVV-----------------DRYAFSGVAFTS 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK+G D+ WC P++GLP PD V+ ++ + R +G ERYE +DFQR VA Y++L
Sbjct: 109 AKKGFDLEWCKAPDRGLPAPDIVIFLDISVDNAAERSEYGGERYETSDFQRSVANRYKEL 168
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ + W +DA K I+ L ++ I +TIK + LE+
Sbjct: 169 QADSWKVLDAGKSIEELHKEIQKIACETIKLASDKALET 207
>gi|145348882|ref|XP_001418872.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579102|gb|ABO97165.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 134/216 (62%), Gaps = 19/216 (8%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
RGAF++FEG DR GK+TQA +LV L + ++ +PDR + G +ID+YLR K E+
Sbjct: 9 ARGAFVLFEGADRCGKSTQAMRLVHTLEARGVEAELWRYPDRATAMGKMIDQYLRSKSEM 68
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D A HLLF+ANRWE++ + + + G+TL DRYS+SG AF+
Sbjct: 69 EDGAIHLLFAANRWEKKALMERKLASGVTL-----------------VCDRYSYSGCAFT 111
Query: 126 AAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
AAK +G+D+ WC PE GLP+PDA++ +L+ E +R GFG+ERYE T+ QR V ++
Sbjct: 112 AAKGVDGLDLEWCRAPEVGLPRPDALMYLELSLEDAAKRGGFGEERYETTEMQRAVKASF 171
Query: 184 EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
E ++++ W IDA+++ D + V I + ++K +
Sbjct: 172 EAMREDWWDVIDANREPDVIQDEVLRIALSAVEKCR 207
>gi|196015603|ref|XP_002117658.1| hypothetical protein TRIADDRAFT_32784 [Trichoplax adhaerens]
gi|190579827|gb|EDV19916.1| hypothetical protein TRIADDRAFT_32784 [Trichoplax adhaerens]
Length = 211
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 130/217 (59%), Gaps = 17/217 (7%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MA+ RGA I+ EG DR+GK+TQ+K LVD L + ++ V FPDRT G + YL+
Sbjct: 1 MATDRNRGALIIIEGGDRTGKSTQSKMLVDALLADGKQAELVKFPDRTTPIGKLAGSYLQ 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
K ++L D A HL+FSANRWE+ P++ + +E GITL + DRY+FS
Sbjct: 61 KTLDLEDHAIHLIFSANRWEKVPSIIERLENGITLVV-----------------DRYAFS 103
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GVA+++AK G DI WC Q + G+P PD V+ L + R +G ERYE T FQ++
Sbjct: 104 GVAYTSAKRGFDIEWCKQSDTGIPAPDLVIYLTLPVDQATSRDQYGTERYESTQFQKRAV 163
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
EN+EKL W +DA + ID + +KD+ + +++
Sbjct: 164 ENFEKLMTKNWTTLDASQSIDAIHQQMKDLTTEIMQQ 200
>gi|307109187|gb|EFN57425.1| hypothetical protein CHLNCDRAFT_20952 [Chlorella variabilis]
Length = 230
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 130/221 (58%), Gaps = 19/221 (8%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MA Q RGAFIVFEG DR+GK+TQ + LV++L + ++ FPDRT G +I+ YL
Sbjct: 1 MAQQQARGAFIVFEGADRAGKSTQCQMLVEHLQAQGVAAELWRFPDRTTPIGKMINSYLT 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ ++ D A HLLFSANRWE+ L + + +G TL + DRY++S
Sbjct: 61 SQSDIDDAAVHLLFSANRWEKREELLRKLHEGTTLVV-----------------DRYAYS 103
Query: 121 GVAFSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRK 178
GVAF+AAK G+D +WC P+ GLP PDAV L E R G+G+ERYE+ +FQRK
Sbjct: 104 GVAFTAAKGLPGLDRAWCMAPDAGLPAPDAVFFLCLTVEQAAARGGYGEERYEKDEFQRK 163
Query: 179 VAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
V + + ++ + W +DA + ID + +++ + + Q
Sbjct: 164 VLDQFHAMRGSSWRVVDASQSIDAIQQQLREQAAAVVARCQ 204
>gi|412986780|emb|CCO15206.1| thymidylate kinase [Bathycoccus prasinos]
Length = 219
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 140/220 (63%), Gaps = 19/220 (8%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
A + RGAFI+FEG DR GKTTQA KLV+ LN++ + S+ +PDRT + G +ID+YL+
Sbjct: 5 AKSLSRGAFILFEGVDRCGKTTQASKLVESLNQSGVASELWRYPDRTTTIGKMIDDYLQC 64
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
K + D + HLLF+ANRWE++ + + + G+TL + DRY +SG
Sbjct: 65 KADSDDASMHLLFAANRWEKKKMMEEKLRAGVTLVV-----------------DRYGYSG 107
Query: 122 VAFSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
VAF++AK+ G+D WC E GL KPD ++ +++E+A ++R GFG+ERYE T+ Q+ V
Sbjct: 108 VAFTSAKKLPGLDQQWCKHSETGLVKPDCLMYMEISEDAAKKRGGFGEERYETTEMQKNV 167
Query: 180 AENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
E + L+++ W +DAD+ I+ + V+ I D +++ +
Sbjct: 168 REVFADLREDWWNVVDADRTIEEVQKDVQTIAKDAVERCK 207
>gi|145334853|ref|NP_001078772.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
gi|332009807|gb|AED97190.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
Length = 271
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 129/212 (60%), Gaps = 18/212 (8%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
PRGA IV EG DRSGK+TQ KL+ +LN P++ FPDR S G +I YL K +L
Sbjct: 65 PRGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQL 124
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D HLLFSANRWE+ + + ++ G TL + DRYS+SGVAFS
Sbjct: 125 DDHTIHLLFSANRWEKRSLMEEKLKTGTTLIV-----------------DRYSYSGVAFS 167
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
+AK G+DI WC PE GL PD+VL ++ E R G+GDERYE+ +FQ+KVA+ Y+
Sbjct: 168 SAK-GLDIEWCKAPEIGLLAPDSVLYLDISPERAAERGGYGDERYERVEFQKKVADFYQT 226
Query: 186 LKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
L D+ W I+A ++ + ++ +V+D +K+
Sbjct: 227 LGDSSWKIINASDAMEEVEKKIQQVVLDQVKE 258
>gi|21553651|gb|AAM62744.1| thymidylate kinase-like protein [Arabidopsis thaliana]
Length = 263
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 129/212 (60%), Gaps = 18/212 (8%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
PRGA IV EG DRSGK+TQ KL+ +LN P++ FPDR S G +I YL K +L
Sbjct: 57 PRGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQL 116
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D HLLFSANRWE+ + + ++ G TL + DRYS+SGVAFS
Sbjct: 117 DDHTIHLLFSANRWEKRSLMEEKLKTGTTLIV-----------------DRYSYSGVAFS 159
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
+AK G+DI WC PE GL PD+VL ++ E R G+GDERYE+ +FQ+KVA+ Y+
Sbjct: 160 SAK-GLDIEWCKAPEIGLLAPDSVLYLDISPERAAERGGYGDERYERVEFQKKVADFYQT 218
Query: 186 LKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
L D+ W I+A ++ + ++ +V+D +K+
Sbjct: 219 LGDSSWKIINASDAMEEVEKKIQQVVLDQVKE 250
>gi|30697225|ref|NP_851222.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
gi|110741098|dbj|BAE98643.1| thymidylate kinase - like protein [Arabidopsis thaliana]
gi|332009806|gb|AED97189.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
Length = 263
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 129/212 (60%), Gaps = 18/212 (8%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
PRGA IV EG DRSGK+TQ KL+ +LN P++ FPDR S G +I YL K +L
Sbjct: 57 PRGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQL 116
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D HLLFSANRWE+ + + ++ G TL + DRYS+SGVAFS
Sbjct: 117 DDHTIHLLFSANRWEKRSLMEEKLKTGTTLIV-----------------DRYSYSGVAFS 159
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
+AK G+DI WC PE GL PD+VL ++ E R G+GDERYE+ +FQ+KVA+ Y+
Sbjct: 160 SAK-GLDIEWCKAPEIGLLAPDSVLYLDISPERAAERGGYGDERYERVEFQKKVADFYQT 218
Query: 186 LKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
L D+ W I+A ++ + ++ +V+D +K+
Sbjct: 219 LGDSSWKIINASDAMEEVEKKIQQVVLDQVKE 250
>gi|30697228|ref|NP_568907.2| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
gi|332009805|gb|AED97188.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
Length = 224
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 129/212 (60%), Gaps = 18/212 (8%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
PRGA IV EG DRSGK+TQ KL+ +LN P++ FPDR S G +I YL K +L
Sbjct: 18 PRGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQL 77
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D HLLFSANRWE+ + + ++ G TL + DRYS+SGVAFS
Sbjct: 78 DDHTIHLLFSANRWEKRSLMEEKLKTGTTLIV-----------------DRYSYSGVAFS 120
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
+AK G+DI WC PE GL PD+VL ++ E R G+GDERYE+ +FQ+KVA+ Y+
Sbjct: 121 SAK-GLDIEWCKAPEIGLLAPDSVLYLDISPERAAERGGYGDERYERVEFQKKVADFYQT 179
Query: 186 LKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
L D+ W I+A ++ + ++ +V+D +K+
Sbjct: 180 LGDSSWKIINASDAMEEVEKKIQQVVLDQVKE 211
>gi|327267155|ref|XP_003218368.1| PREDICTED: thymidylate kinase-like [Anolis carolinensis]
Length = 212
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 129/220 (58%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ+++LV+ L ++ + FP+RT G +I YL KK L
Sbjct: 5 RGALIVLEGVDRAGKSTQSRRLVEALGAKGHRAELLRFPERTTKIGQLISSYLEKKNNLE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE+ P + + + QGITL + DRY+FSGVAF+
Sbjct: 65 DHTVHLLFSANRWEQVPLIKEKLNQGITLVV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD +L +LN +R FG ERYE + FQ KV + Y L
Sbjct: 108 AKENFSLEWCKQPDVGLPKPDVILFLQLNTSEAAKRGDFGSERYENSSFQEKVLQCYYDL 167
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
++ W IDA K I+ L +K IV + ++++Q P+
Sbjct: 168 MEDKTLNWKVIDASKTIEDLHNEIKSIVEEAMQEAQHKPI 207
>gi|241613926|ref|XP_002407467.1| thymidylate kinase, putative [Ixodes scapularis]
gi|215502816|gb|EEC12310.1| thymidylate kinase, putative [Ixodes scapularis]
Length = 214
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 128/218 (58%), Gaps = 23/218 (10%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
I RG F+VFEGCDR+GKTTQ K L + L+K ++ V FP+R+ +TG ++D YL+ +
Sbjct: 4 IQRGLFVVFEGCDRTGKTTQIKLLSESLSKLGHKTETVAFPNRSTTTGTLLDSYLKASTD 63
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L D A HLLFSANRWE P+L + + T+ DRY++SGVAF
Sbjct: 64 LDDHAVHLLFSANRWEAAPSLLSTLARNTTV-----------------IADRYAYSGVAF 106
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
SAAK +D WC Q + GLP+PD VL + E L R GFG+ERYE + FQ KV NY
Sbjct: 107 SAAKS-LDFRWCQQCDVGLPEPDLVLYMSVPPETLAARGGFGEERYENSSFQEKVRANYN 165
Query: 185 KL-----KDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
L K WI++D K + + I++ +V++ + K
Sbjct: 166 HLASLEAKGGRWIEVDCSKSVQEVHHIIESVVLEALTK 203
>gi|432853377|ref|XP_004067677.1| PREDICTED: thymidylate kinase-like isoform 1 [Oryzias latipes]
Length = 212
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 131/226 (57%), Gaps = 22/226 (9%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MA Q RGA IV EG DR+GKTTQ K LV L K+ P++ + FPDRT + G +I YL
Sbjct: 1 MACQ--RGALIVLEGVDRAGKTTQCKMLVQALQKSGRPAEAMRFPDRTTTIGQLISAYLE 58
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
KK EL D HLLFSANRWE PT+ K +EQGITL + DRY+FS
Sbjct: 59 KKSELEDHTVHLLFSANRWELVPTMKKKLEQGITLVV-----------------DRYAFS 101
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
G AF++AK G + WC +P+ GLPKPD V+ +L+ R FG ERYE FQ V
Sbjct: 102 GAAFTSAKPGFSLEWCMKPDVGLPKPDLVMFLQLSPAEAALRGQFGVERYETRVFQNAVQ 161
Query: 181 ENYEKL-KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ +E L KD+ W IDA K ++ + + ++ I K++ PL
Sbjct: 162 QKFELLMKDSSVNWQVIDASKSVEEVHRDITVHSLNAINKAEDIPL 207
>gi|148907170|gb|ABR16728.1| unknown [Picea sitchensis]
Length = 258
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 121/209 (57%), Gaps = 18/209 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DRSGK++Q KL L + FPDRT + G +I YL K ++
Sbjct: 54 RGALIVLEGLDRSGKSSQCLKLASSLASQGFSVEAWRFPDRTTAMGKMISAYLSSKEDMD 113
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HLLFSANRWE+ + ++ G +L + DRYS+SGVAFSA
Sbjct: 114 DRTIHLLFSANRWEKRSLMEAKMKAGTSLIV-----------------DRYSYSGVAFSA 156
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D+SWC PE GLP PD VL + E R G+G ERYEQ DFQRKVAE Y L
Sbjct: 157 AK-GLDLSWCKAPEVGLPAPDLVLYLDIAPEKAAERGGYGGERYEQLDFQRKVAELYTAL 215
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
D+ W +DA ID++ I+K++ I I
Sbjct: 216 SDSAWQIVDASLSIDSVHKILKELSIQCI 244
>gi|391340461|ref|XP_003744559.1| PREDICTED: thymidylate kinase-like [Metaseiulus occidentalis]
Length = 208
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 119/190 (62%), Gaps = 17/190 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQA+ LV LN I ++ FPDRT G +I EYL +L
Sbjct: 4 RGALIVLEGLDRTGKSTQARTLVKNLNSKGILAELQIFPDRTTQIGKVISEYLSHARDLD 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+A HLLFSANRWE++ + +E+GI+L + DRY+FSGVAFS+
Sbjct: 64 DRAIHLLFSANRWEKKNAMVSKLEKGISLVV-----------------DRYAFSGVAFSS 106
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+ WC QP+ GL KPD V + E L++R G+G+ERYE +FQ++VA Y +L
Sbjct: 107 AKPGLSQEWCRQPDVGLLKPDVVFFLTADPETLKQRGGYGEERYENVEFQKRVAAEYSEL 166
Query: 187 KDNIWIDIDA 196
+D WI +DA
Sbjct: 167 EDPSWIRVDA 176
>gi|15912289|gb|AAL08278.1| AT5g59440/f2o15_100 [Arabidopsis thaliana]
gi|19548005|gb|AAL87366.1| AT5g59440/f2o15_100 [Arabidopsis thaliana]
Length = 224
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 128/212 (60%), Gaps = 18/212 (8%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
PRGA IV EG DRSGK+TQ KL+ +LN P++ FPDR S G +I YL K +L
Sbjct: 18 PRGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQL 77
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D HLLFSANRWE+ + + ++ G TL + RYS+SGVAFS
Sbjct: 78 DDHTIHLLFSANRWEKRSLMEEKLKTGTTLIVY-----------------RYSYSGVAFS 120
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
+AK G+DI WC PE GL PD+VL ++ E R G+GDERYE+ +FQ+KVA+ Y+
Sbjct: 121 SAK-GLDIEWCKAPEIGLLAPDSVLYLDISPERAAERGGYGDERYERVEFQKKVADFYQT 179
Query: 186 LKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
L D+ W I+A ++ + ++ +V+D +K+
Sbjct: 180 LGDSSWKIINASDAMEEVEKKIQQVVLDQVKE 211
>gi|297793501|ref|XP_002864635.1| thymidylate kinase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310470|gb|EFH40894.1| thymidylate kinase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 18/212 (8%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
PRGA IV EG DRSGK+TQ KL+ +L P++ FPDR S G +I YL K +L
Sbjct: 57 PRGALIVLEGLDRSGKSTQCAKLLSFLEGLGHPTELWRFPDRETSVGQMISAYLSNKSQL 116
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D HLLFSANRWE+ + + ++ G TL + DRYS+SGVAFS
Sbjct: 117 DDHTIHLLFSANRWEKRSLMEEKLKTGTTLIV-----------------DRYSYSGVAFS 159
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
+AK G++I WC PE GL PD+VL ++ E R G+GDERYE+ +FQ+KVA+ Y+
Sbjct: 160 SAK-GLNIDWCKAPEIGLLAPDSVLYLDISPERAAERGGYGDERYERVEFQKKVADFYQT 218
Query: 186 LKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
L+D+ W I+A + ++ + ++++ +D +K+
Sbjct: 219 LRDSSWKIINAGEAMEEVEKKIQEVALDKVKE 250
>gi|225716352|gb|ACO14022.1| Thymidylate kinase [Esox lucius]
Length = 212
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 130/220 (59%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG D++GKTTQ KL+ L +N P++ + FP+RT G +I+ YL KK L
Sbjct: 5 RGALIVLEGVDKAGKTTQCNKLIQALLENEQPAEMMRFPERTTMIGQLINSYLEKKSNLE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE+ P + + +EQGITL + DRY+FSGVAF++
Sbjct: 65 DHTVHLLFSANRWEQVPLMKEKLEQGITLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G + WC P+ GLPKPD V+ ++ RR FG ERYE + FQR V + +E+L
Sbjct: 108 AKPGFTLDWCKNPDVGLPKPDLVMFLNVSPSEAARRGHFGTERYETSVFQRAVQQGFEEL 167
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD+ W I A ++I+ + +K+ I+ I + P+
Sbjct: 168 MKDSSVNWQVIGASRNIEDVHADIKNHTIEAITTAMTQPI 207
>gi|260796149|ref|XP_002593067.1| hypothetical protein BRAFLDRAFT_278571 [Branchiostoma floridae]
gi|229278291|gb|EEN49078.1| hypothetical protein BRAFLDRAFT_278571 [Branchiostoma floridae]
Length = 215
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 136/223 (60%), Gaps = 20/223 (8%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MAS RGA IV EG D SGKTTQ KLV+ L K+ ++ + FPDRT + G +I++YL
Sbjct: 1 MAS--ARGALIVLEGVDHSGKTTQCMKLVEALKKHGQKAELIRFPDRTTAIGSVINDYLG 58
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
K EL D A HLLFSANRWE P + KL+ +G +L + DRY++S
Sbjct: 59 NKCELHDFAIHLLFSANRWEAVPRMEKLLSEGTSLIV-----------------DRYAYS 101
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GVAF+AAK G+D+ + GLP+PD V+ L E +R +G ERYEQTDFQ+KVA
Sbjct: 102 GVAFTAAK-GLDMRRLQHSDIGLPRPDLVMYLTLPPEEAAKRSEYGGERYEQTDFQKKVA 160
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
EN++ L+++ W ++A++ I+ L + + + I KS P+
Sbjct: 161 ENFKVLQEDDWKILNANQTIEELHTHILQLAKEAITKSSCQPI 203
>gi|148231460|ref|NP_001084596.1| deoxythymidylate kinase (thymidylate kinase) [Xenopus laevis]
gi|46250064|gb|AAH68663.1| MGC81047 protein [Xenopus laevis]
Length = 212
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 131/220 (59%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQA++LV+ L + ++ + FP+RT G +I YL KK L
Sbjct: 5 RGALIVLEGADRAGKSTQARRLVEALKERGYRTEGLRFPERTTEIGQLIGSYLEKKSNLE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE+ P + + + GITL + DRY+FSGVAF++
Sbjct: 65 DHTIHLLFSANRWEQVPMIKEKLRSGITLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
+KE D+ WC QP+ GLPKPD VL K++ E R GFG+E YE FQ KVA+ Y +L
Sbjct: 108 SKENFDLHWCKQPDVGLPKPDLVLFLKVSPEVAATRGGFGNEIYETNSFQEKVAKRYAQL 167
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
D+ W +DA +DI+ + +K++ I ++ P+
Sbjct: 168 MDDKTVNWKLVDASQDIENVHRQLKELSEKAIDDAKDQPI 207
>gi|384246983|gb|EIE20471.1| hypothetical protein COCSUDRAFT_48524 [Coccomyxa subellipsoidea
C-169]
Length = 226
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 126/218 (57%), Gaps = 19/218 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAF++FEG DR GKTTQ+++LV+YL + ++ FPDR + G +ID YL + E
Sbjct: 14 RGAFLLFEGVDRCGKTTQSQRLVEYLKGKGVAAELWRFPDRYTAIGRMIDSYLSGETEAD 73
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE+ + + G TL + DRY++SG AF+A
Sbjct: 74 DAAVHLLFSANRWEKREAMLAALHAGHTLVV-----------------DRYAYSGAAFTA 116
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK+ G+D+ WC P+KGLP PDAV+ ++ EA R G+G ERYE+ + Q++V+ +
Sbjct: 117 AKKVPGLDLEWCKAPDKGLPAPDAVIYLSMSPEAAALRGGYGKERYEKEEMQKEVSRQFA 176
Query: 185 KLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSP 222
L D+ W +DA + + + V++I + P
Sbjct: 177 LLADDTWHTVDAAQSVKAVESQVQEIAEGAVASCSKGP 214
>gi|332022461|gb|EGI62769.1| Thymidylate kinase [Acromyrmex echinatior]
Length = 208
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 131/218 (60%), Gaps = 17/218 (7%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EGCDR+GK+TQ K L++ LN IP++ FP+R G I++ +L K+I +P
Sbjct: 4 RGALIVLEGCDRAGKSTQVKMLMNALNDLRIPAKARAFPNRKTPVGTILNSFLSKEINMP 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+AAHLLFSANRWE + + K + G TL I DRY+ SG ++A
Sbjct: 64 PEAAHLLFSANRWECKEDMEKTLRSGTTLVI-----------------DRYAASGTVYTA 106
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
A G +SWC Q + GLPKPD V+ K++++ + R +G ER+E +FQ++V NYEKL
Sbjct: 107 ANTGRSLSWCQQADLGLPKPDCVVFLKVSKQQQELRGDWGKERFEHDEFQQRVNANYEKL 166
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
+D+ W+ I+AD+D + + + I+ Q+ +E
Sbjct: 167 RDDTWVIINADQDESAVHAEILQKTLSVIQDVQYHSIE 204
>gi|357608814|gb|EHJ66161.1| putative thymidylate kinase [Danaus plexippus]
Length = 210
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 129/218 (59%), Gaps = 18/218 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GKTTQ + LV+ L ++ + + NFPDRT G +I+ YL +K E+
Sbjct: 5 RGALIVIEGVDRTGKTTQCRNLVEGLKNKDVAAMYSNFPDRTSEIGKVINHYLTRKTEMS 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HLLFSANRWE+ + K +E G TL I DRY +SGVAFS
Sbjct: 65 DETIHLLFSANRWEKCGEIIKQLETGTTLII-----------------DRYCYSGVAFSG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+DI+WC + GLPKPD V + E +R GFG+ERYE +FQ+KV + Y +L
Sbjct: 108 AK-GLDINWCKNSDVGLPKPDKVFFLNMPLETAMQRNGFGNERYEVKNFQKKVLDVYMQL 166
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
KD W +DA++ +D + + ++ +K PL+
Sbjct: 167 KDEKWDILDANRPMDIIQDELLQKTLEVVKNVSNEPLD 204
>gi|225452175|ref|XP_002264926.1| PREDICTED: thymidylate kinase [Vitis vinifera]
gi|296090257|emb|CBI40076.3| unnamed protein product [Vitis vinifera]
Length = 260
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 124/213 (58%), Gaps = 18/213 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DRSGK++Q+ +++ YL + ++ FPDR+ G +I YL K +L
Sbjct: 50 RGALIVLEGLDRSGKSSQSSRMMSYLEGLGVSAELWRFPDRSTCVGQMISSYLANKSDLD 109
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE+ + + G TL + DRYS+SGVAFS+
Sbjct: 110 DHTIHLLFSANRWEKRSLMETKLRTGTTLIV-----------------DRYSYSGVAFSS 152
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+DI WC PE GL PD V+ + E R G+G ERYEQ DFQRKVA +Y+ L
Sbjct: 153 AK-GLDIEWCKAPEMGLLAPDLVVYLNIPPEKAAERGGYGGERYEQLDFQRKVAHHYQVL 211
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
+D W IDA I+ + ++D+V+D +K +
Sbjct: 212 RDPSWKIIDASLPIEDVEKPLRDMVLDCVKTCK 244
>gi|80751137|ref|NP_001032187.1| thymidylate kinase [Danio rerio]
gi|78070418|gb|AAI07816.1| Zgc:123174 [Danio rerio]
Length = 212
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 127/220 (57%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GKTTQ +KLV + ++ ++ + FPDRT G +I YL KK L
Sbjct: 5 RGALIVLEGVDRAGKTTQCQKLVQAIQQSGRAAEIMRFPDRTTKIGQLISSYLEKKSNLE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE P + + +E+GI L + DRY+FSGVAF++
Sbjct: 65 DHTVHLLFSANRWEMVPVMKQKLEEGINLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G + WC P+ GLPKPD V+ +LN R +G+ERYE + FQR V + +E+L
Sbjct: 108 AKPGFSLEWCMNPDVGLPKPDLVMFLQLNPNVAANRGEYGNERYETSAFQRTVQQRFEEL 167
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ W IDA + I+ + +KD+ + I ++ P+
Sbjct: 168 MQDTSINWKVIDAARTIEEVHKDIKDLSENIISLAEEQPV 207
>gi|194755687|ref|XP_001960115.1| GF13205 [Drosophila ananassae]
gi|190621413|gb|EDV36937.1| GF13205 [Drosophila ananassae]
Length = 211
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 128/223 (57%), Gaps = 21/223 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
I RGA IVFEGCDRSGK+TQ+++L + L IP++ +NFPDR+ G +I+ YL +
Sbjct: 4 IKRGALIVFEGCDRSGKSTQSRRLAELLKSRGIPTESLNFPDRSTDIGQVINSYLTNSKD 63
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L D+ HLLFS NRWE L + + G TL + DRYS+SGVA+
Sbjct: 64 LQDEVIHLLFSVNRWELMGKLRQKLLAGTTLIV-----------------DRYSYSGVAY 106
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
S AK GMD WC+ PE+GL KPDAV + + L R FG+ERYE+ +FQ +V+ Y+
Sbjct: 107 SVAK-GMDFDWCYAPERGLIKPDAVFYLRAVPDRLAERSEFGEERYEKVEFQSRVSAVYD 165
Query: 185 KLKDN---IWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
++ N W +DA D L ++ +I + K PL+
Sbjct: 166 RIFSNESTYWHQLDASVTADELHFLIAEIAEKLLPKVTTQPLD 208
>gi|281209668|gb|EFA83836.1| thymidylate kinase [Polysphondylium pallidum PN500]
Length = 219
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 141/226 (62%), Gaps = 21/226 (9%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKN-NIPSQFVNFPDRTISTGHIIDEYLR 60
+++ RG FI+FEG DR GK+TQ + L +L+ +P++ + FPDRT TG II+ YL+
Sbjct: 10 TTEMKRGIFILFEGADRVGKSTQVQSLFGHLSTTLGLPTKQLRFPDRTTQTGTIINSYLQ 69
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+L D+A HLLFSANRWE + TL K + +G +L + DRYS+S
Sbjct: 70 NSTQLDDRALHLLFSANRWESKDTLLKHLNEGNSLVV-----------------DRYSYS 112
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GVA+SAAK G+D WCF EKGLP PD + K++ E +R +G+ERYE+ DFQ+K+
Sbjct: 113 GVAYSAAK-GIDFDWCFGCEKGLPAPDLIFYLKMDTEDATKRGDYGNERYEKVDFQKKIK 171
Query: 181 ENYE-KLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKS-QFSPLE 224
E YE KL ++ W I+A++ I+ + + +IV +IK Q P++
Sbjct: 172 EVYESKLVNSSWNVINANRPIEEVSKEINEIVDRSIKNGIQNKPIQ 217
>gi|313229292|emb|CBY23878.1| unnamed protein product [Oikopleura dioica]
Length = 212
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 134/223 (60%), Gaps = 21/223 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA I+FEG DRSGK+TQ K++ + + FP+RT G I+ YL+ +
Sbjct: 1 MARGALIIFEGVDRSGKSTQIKRIFNQMVNKGENVHLTRFPERTSEIGQTINGYLKSSND 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L DQA HLLFSANRWE ++ + G ++ + DRY+FSGVAF
Sbjct: 61 LSDQAIHLLFSANRWEHAQSILNYMNNGTSVLV-----------------DRYAFSGVAF 103
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G+D+ WC P++GLPKPD VL ++EE ++R GFG+ERYE+ +FQR+V + Y
Sbjct: 104 TAAK-GLDLEWCKNPDRGLPKPDLVLQLDVDEETAKKRGGFGEERYEKVEFQRQVRKLYS 162
Query: 185 KLKD---NIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
+L++ +IW IDA +D L +++ V +TIK Q +E
Sbjct: 163 QLREEHSDIWKIIDASASVDELTPALQNHVDETIKSCQNKDIE 205
>gi|422933562|ref|YP_007003686.1| thymidylate kinase [Cyprinid herpesvirus 1]
gi|386685968|gb|AFJ20321.1| thymidylate kinase [Cyprinid herpesvirus 1]
Length = 232
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 123/205 (60%), Gaps = 21/205 (10%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
+ S++ RGA +V EG DR+GKTTQ +KLV+ L + P++ + FPDRT + G +I YL
Sbjct: 15 ITSKMKRGALVVLEGVDRAGKTTQCQKLVEALQGSGRPAELMRFPDRTTTIGKMISSYLE 74
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
K EL D A HLLFSANRWE P + + +E+G +L + DRY+FS
Sbjct: 75 SKTELDDHAVHLLFSANRWELVPLMKQKLERGTSLVL-----------------DRYAFS 117
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GVAFS+AK M + WC P+ GLPKPD V+ LN A + R G+G ERYE FQ KV
Sbjct: 118 GVAFSSAKPDMPVEWCMGPDVGLPKPDLVMFLSLNPTAAETRGGYGLERYETNTFQSKVE 177
Query: 181 ENYEKL--KDNI--WIDIDADKDID 201
+ + L +D+ W +DA + ++
Sbjct: 178 QRFSTLIQEDSSVDWRVVDAGRTVE 202
>gi|255071733|ref|XP_002499541.1| predicted protein [Micromonas sp. RCC299]
gi|226514803|gb|ACO60799.1| predicted protein [Micromonas sp. RCC299]
Length = 216
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 122/197 (61%), Gaps = 19/197 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFI+FEG DR GKTTQ+ KLV+ L + ++ +PDRT G +I+ YL+ +++
Sbjct: 9 RGAFILFEGVDRCGKTTQSTKLVESLKAAGVNAELWRYPDRTTEMGKMINAYLQSSLDMD 68
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE+ + K + G+TL + DRYS+SGVAF+A
Sbjct: 69 DGAIHLLFSANRWEKRAAMEKALGDGVTLVV-----------------DRYSYSGVAFTA 111
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AKE G+D+ WC PE+GL +PDAVL + +A + R GFG+ERYE + Q +V ++
Sbjct: 112 AKEVPGLDLEWCKAPERGLLRPDAVLYLDMPVDAAKTRGGFGEERYETGELQERVRTHFR 171
Query: 185 KLKDNIWIDIDADKDID 201
L+++ W IDA ID
Sbjct: 172 VLREDWWTIIDASGTID 188
>gi|410920720|ref|XP_003973831.1| PREDICTED: thymidylate kinase-like isoform 1 [Takifugu rubripes]
Length = 212
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 128/220 (58%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG D++GKTTQ +KLV L + P++ + FPDRT + G +I YL + EL
Sbjct: 5 RGALIVLEGVDKAGKTTQCQKLVQALRRKGHPAEMMRFPDRTTTIGKMISAYLENQSELS 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
DQ HLLFSANRWE P + K +EQG TL + DRY+FSGVAF++
Sbjct: 65 DQTVHLLFSANRWELVPLIKKKLEQGTTLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G + WC QP+ GLPKPD VL +L+ R FG ERYE++ FQ V + ++ L
Sbjct: 108 AKPGFSLHWCKQPDVGLPKPDLVLFLQLSPAEAALRGHFGMERYEKSSFQCAVQQQFKHL 167
Query: 187 KDN---IWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
++ W IDA +++ + + + ++ I +Q PL
Sbjct: 168 MEDETVNWKVIDASMNVEDVHKDITEHSLNAINIAQNLPL 207
>gi|320169555|gb|EFW46454.1| deoxythymidylate kinase [Capsaspora owczarzaki ATCC 30864]
Length = 210
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 127/221 (57%), Gaps = 18/221 (8%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
S + RGA IVFEGCDRSGK+TQ LV+ L Q + FPDR+ TG I+ YL
Sbjct: 4 SSLARGALIVFEGCDRSGKSTQCLMLVERLKALGKRVQHLRFPDRSTPTGQKINAYLANA 63
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
E+ D H LFS NRWE P++ + ++ G TL + DRY+FSGV
Sbjct: 64 SEMQDDKIHQLFSENRWEAVPSMLEALKNGTTLVV-----------------DRYAFSGV 106
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
AFS+AK G+D+ WC +P+ GLP PDAV+ + EA +R FG+ERYE FQ KVA
Sbjct: 107 AFSSAK-GLDLEWCKKPDAGLPAPDAVIYLDIPIEAAMKRGDFGNERYETRAFQEKVAAQ 165
Query: 183 YEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
Y+KL+ W+ +DA ID L + +I I +Q +P+
Sbjct: 166 YKKLQTPSWMMMDARLPIDQLQADIFNIASKVIADAQNAPV 206
>gi|302795849|ref|XP_002979687.1| hypothetical protein SELMODRAFT_111305 [Selaginella moellendorffii]
gi|300152447|gb|EFJ19089.1| hypothetical protein SELMODRAFT_111305 [Selaginella moellendorffii]
Length = 253
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 122/209 (58%), Gaps = 18/209 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DRSGK++Q +LV++L + + FPDRT + G I YL EL
Sbjct: 6 RGALIVLEGLDRSGKSSQCHRLVEFLKGTGLKVEAWRFPDRTTAIGSSISAYLGGGAELD 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+A HLLFSANRWE+ + K + G TL + DRYS+SGVAFSA
Sbjct: 66 DRAVHLLFSANRWEKRLQMEKKLMAGTTLVV-----------------DRYSYSGVAFSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D+ WC PE GLP D VL ++ E R G+GDERYEQ DFQ+KVA Y+ L
Sbjct: 109 AK-GLDLEWCKAPEVGLPAADLVLYLDISPEEAAVRGGYGDERYEQLDFQKKVALQYKGL 167
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
+ W +DA + D + ++++ + T+
Sbjct: 168 QGKRWKIVDARQSFDQVHELMRETCVKTV 196
>gi|313246105|emb|CBY35059.1| unnamed protein product [Oikopleura dioica]
Length = 212
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 133/223 (59%), Gaps = 21/223 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA I+FEG DRSGK+TQ K++ + + FP+RT G I+ YL+ +
Sbjct: 1 MARGALIIFEGVDRSGKSTQIKRIFNQMVNKGENVHLTRFPERTSEIGQTINGYLKSSND 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L DQA HLLFSANRWE ++ + G ++ + DRY+FSGVAF
Sbjct: 61 LSDQAIHLLFSANRWEHAQSILNYMNNGTSVLV-----------------DRYAFSGVAF 103
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G+D+ WC P++GLPKPD VL ++EE ++R GFG+ERYE+ +FQR+V + Y
Sbjct: 104 TAAK-GLDLEWCKNPDRGLPKPDLVLQLDVDEETAKKRGGFGEERYEKVEFQRQVRKLYS 162
Query: 185 KLKD---NIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
+L++ +IW IDA +D L ++ V +TIK Q +E
Sbjct: 163 QLREEHSDIWKIIDASGSVDELTPALQTHVDETIKSCQNKDIE 205
>gi|328776703|ref|XP_624530.3| PREDICTED: thymidylate kinase-like [Apis mellifera]
Length = 214
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 136/220 (61%), Gaps = 17/220 (7%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
I RGA IV EGCDR+GK+TQAK L+ LN NIP + +FP+RT + G II+ +L KK E
Sbjct: 3 IRRGALIVLEGCDRAGKSTQAKMLITALNNLNIPVELHSFPNRTTTIGEIINNFLTKKTE 62
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
LP + HLLFSANRWE + + K + +G TL I DRY+ SG A+
Sbjct: 63 LPPETIHLLFSANRWECKDEILKTLYKGTTLII-----------------DRYAASGAAY 105
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AA G +++WC +P+ GLP PD V+ +++++ R +GDER+E +FQ VA NYE
Sbjct: 106 TAATTGKNLNWCREPDSGLPSPDLVIYLSISKKSQSLRSNWGDERFENVEFQELVASNYE 165
Query: 185 KLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
KL D W I+AD D + + + VIDTIK + SP+E
Sbjct: 166 KLIDKTWYVINADDDKSVIHSQILEKVIDTIKNVKHSPIE 205
>gi|388518205|gb|AFK47164.1| unknown [Medicago truncatula]
Length = 263
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 128/220 (58%), Gaps = 19/220 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DRSGK++Q +LV YL + ++ FPDRT + G +I YL +L
Sbjct: 58 RGALIVLEGLDRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLD 117
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE+ + ++ G TL + DRYS+SGVAFS+
Sbjct: 118 DHTIHLLFSANRWEKRSLMETKLKSGTTLIV-----------------DRYSYSGVAFSS 160
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+DI WC PE GL PD V ++ + R G+GDERYE+ +FQ+KVAE+Y+ L
Sbjct: 161 AK-GLDIDWCKSPENGLLAPDLVAYLDISPDKAAERGGYGDERYEKLEFQQKVAEHYKVL 219
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKS-QFSPLES 225
D W +DA + I+ + +++I + +K+ Q PL S
Sbjct: 220 HDTSWKIVDACQPIEDVEKQLQEIALACVKQCQQGKPLSS 259
>gi|116805978|emb|CAL26368.1| CG5757 [Drosophila simulans]
Length = 211
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 133/222 (59%), Gaps = 21/222 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA I+FEGCDRSGKTTQ++ LV+ L IP+ +NFP+R+ S G +I+ YL +LP
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HL+FSANRWE + + + +G TL + DRYSFSGVA+SA
Sbjct: 66 DEVIHLMFSANRWEHMNQVKQKLLEGTTLVV-----------------DRYSFSGVAYSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC+ PE+GL KPDAV + L R +G+ERYE+ +FQ +VAE ++++
Sbjct: 109 AK-GLDFDWCYAPERGLIKPDAVFYLRAPSNDLTNRGQYGEERYEKVEFQSRVAEVFDRI 167
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ + + DA + ++ L + I + + K PL++
Sbjct: 168 CSKEASYFHKFDATQSVEDLHAQIGSITEELLPKVATQPLDT 209
>gi|55742029|ref|NP_001006834.1| thymidylate kinase [Xenopus (Silurana) tropicalis]
gi|49899892|gb|AAH76907.1| deoxythymidylate kinase (thymidylate kinase) [Xenopus (Silurana)
tropicalis]
gi|89266991|emb|CAJ81735.1| deoxythymidylate kinase (thymidylate kinase) [Xenopus (Silurana)
tropicalis]
Length = 216
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 131/220 (59%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQA++LV+ L + ++ + FP+RT G +I YL KK L
Sbjct: 5 RGALIVLEGADRAGKSTQARRLVEALKERGYKTEGLRFPERTTEIGRLIGSYLEKKSNLE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE+ P + + + G+TL I DRY+FSGVAF++
Sbjct: 65 DHTIHLLFSANRWEQVPMIKEKLRSGVTLVI-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
+KE D+ WC QP+ GLPKPD VL ++ E R GFG+E YE FQ KV++ Y +L
Sbjct: 108 SKENFDLHWCKQPDVGLPKPDLVLFLNVSPEVAASRGGFGNEIYETNSFQEKVSKRYAEL 167
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
++ W IDA ++I+ + +K++ I+ ++ P+
Sbjct: 168 MEDKTVNWTLIDASQNIEDVHRQLKELTEKAIEDAKDKPI 207
>gi|213409950|ref|XP_002175745.1| thymidylate kinase [Schizosaccharomyces japonicus yFS275]
gi|212003792|gb|EEB09452.1| thymidylate kinase [Schizosaccharomyces japonicus yFS275]
Length = 209
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 123/213 (57%), Gaps = 27/213 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG F+VFEG DRSGK+TQA+ L L + + FPDR + G ID YL+ K +LP
Sbjct: 2 RGKFVVFEGLDRSGKSTQAELLKKALIDRGQRAILLRFPDRGTTIGKQIDAYLKNKNKLP 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+A HLLFSANRWE T+ + G+ C DRYSFSGVAFSA
Sbjct: 62 DEAIHLLFSANRWELASTIEAALADGVH-----------------CIVDRYSFSGVAFSA 104
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK GMD WC QPE+GLP PD VL F+++ +R GFG+ERYE FQR VAE Y L
Sbjct: 105 AK-GMDWDWCKQPERGLPSPDIVLFFQVDPNIASKRAGFGNERYELPVFQRTVAEKYALL 163
Query: 187 K---------DNIWIDIDADKDIDTLGLIVKDI 210
+ D+ W+ ID ++ I+ + L + I
Sbjct: 164 RQEFVKERKNDDSWLMIDGNQSIEQVHLKILTI 196
>gi|357452915|ref|XP_003596734.1| Thymidylate kinase [Medicago truncatula]
gi|355485782|gb|AES66985.1| Thymidylate kinase [Medicago truncatula]
Length = 263
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 128/220 (58%), Gaps = 19/220 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DRSGK++Q +LV YL + ++ FPDRT + G +I YL +L
Sbjct: 58 RGALIVLEGLDRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLD 117
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE+ + ++ G TL + DRYS+SGVAFS+
Sbjct: 118 DHTIHLLFSANRWEKRSLMETKLKSGTTLIV-----------------DRYSYSGVAFSS 160
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+DI WC PE GL PD V ++ + R G+GDERYE+ +FQ+KVAE+Y+ L
Sbjct: 161 AK-GLDIDWCKSPENGLLAPDLVAYLDISPDKAAERGGYGDERYEKLEFQQKVAEHYKVL 219
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKS-QFSPLES 225
D W +DA + I+ + +++I + +K+ Q PL S
Sbjct: 220 HDASWKIVDACQPIEDVEKQLQEIALACVKQCQQGKPLSS 259
>gi|229365992|gb|ACQ57976.1| Thymidylate kinase [Anoplopoma fimbria]
Length = 183
Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 113/180 (62%), Gaps = 17/180 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG D++GKTTQ KKLV L ++ P++ + FPDRT + G +I YL KK +L
Sbjct: 5 RGALIVLEGVDKAGKTTQCKKLVQALQQSGRPAEMMRFPDRTTTIGQLISAYLEKKSDLE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE P + K +EQGITL + DRY+FSGVAF++
Sbjct: 65 DHTVHLLFSANRWELVPQMRKKLEQGITLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK+G + WC +P+ GLPKPD V+ +L+ R FG+ERY + FQR V + +E+L
Sbjct: 108 AKQGFCLDWCMKPDVGLPKPDLVIFLQLSPAEATLRGQFGEERYGTSVFQRAVQQRFEQL 167
>gi|322795260|gb|EFZ18065.1| hypothetical protein SINV_01400 [Solenopsis invicta]
Length = 208
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 133/220 (60%), Gaps = 17/220 (7%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGAFIV EGCDR+GK+TQ K L++ LN IP++ FP+R G I++ +L K+I
Sbjct: 2 LKRGAFIVLEGCDRAGKSTQVKMLINALNDLQIPAKARGFPNRKTPVGTILNSFLSKEIN 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+P + AHLLFSANRWE + + K + G++L + DRY+ SG +
Sbjct: 62 VPPETAHLLFSANRWECKEDMEKTLLSGVSLVM-----------------DRYAASGAVY 104
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AA G ++WC QP+ GL KPD V+ K+++ + R +G ER+E +FQ++V NYE
Sbjct: 105 TAANTGRSLNWCQQPDLGLLKPDCVMFLKVSKRQQELRSDWGKERFEHDEFQQRVDANYE 164
Query: 185 KLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
+LKD+ W I+AD+D T+ + + I++ Q+ +E
Sbjct: 165 ELKDDSWFVINADQDESTVHAEILQKTLSVIQEVQYRDIE 204
>gi|255644957|gb|ACU22978.1| unknown [Glycine max]
Length = 299
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 128/220 (58%), Gaps = 22/220 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA +V EG DRSGK++Q +LV +L I ++ FPDRT + G +I YL +L
Sbjct: 57 RGALVVLEGLDRSGKSSQCSRLVPFLEGQGISAELWRFPDRTTNVGQMISAYLTNTSQLD 116
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE+ + ++ G TL + DRYS+SGVAFS+
Sbjct: 117 DHTIHLLFSANRWEKRSLMESKLKTGTTLIV-----------------DRYSYSGVAFSS 159
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC PE GLP PD V+ ++ E R G+G ERYE+ +FQ+KVA+ Y+ L
Sbjct: 160 AK-GLDFEWCKVPEIGLPAPDVVVYLDISPEKAAERGGYGGERYEKLEFQKKVADWYKVL 218
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTI----KKSQFSP 222
D W D+DA + I+ + +++IV+D + K S F P
Sbjct: 219 HDVSWKDVDACQPIEDVEKQLQEIVLDCVTECRKGSPFPP 258
>gi|226529697|ref|NP_001150303.1| LOC100283933 [Zea mays]
gi|195638226|gb|ACG38581.1| thymidylate kinase [Zea mays]
Length = 255
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 126/222 (56%), Gaps = 18/222 (8%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
S+ RGA +V EG DRSGKT+Q +L+ +L ++ +FPDR S G +I YL
Sbjct: 47 GSKGGRGALVVLEGLDRSGKTSQCARLLSFLKGKGYNAEGWSFPDRATSVGQMISSYLAN 106
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+L D+ HLLFSANRWE+ + + G TL + DRYS+SG
Sbjct: 107 DSQLDDRTIHLLFSANRWEKRALMESKLLSGTTLIV-----------------DRYSYSG 149
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
VAFSAAK G+DI WC PE GL PD V+ + E R G+GDERYE+ +FQ+KVAE
Sbjct: 150 VAFSAAK-GLDIEWCKAPENGLIAPDLVIYLDVQPEKAAERGGYGDERYEKIEFQKKVAE 208
Query: 182 NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+Y L D+ W +D ++T+ ++D+ I+ Q +PL
Sbjct: 209 HYHSLCDSTWKVVDGFLPMETVEERLRDLATSCIQDCQGNPL 250
>gi|224055681|ref|XP_002298600.1| predicted protein [Populus trichocarpa]
gi|222845858|gb|EEE83405.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 125/214 (58%), Gaps = 18/214 (8%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
+S RGA IV EG DRSGKT+Q+ +L+ YL ++ FPDR+ S G +I YL
Sbjct: 12 SSSESRGALIVLEGLDRSGKTSQSSRLLSYLEGLGHSTELWRFPDRSTSVGQMISAYLSN 71
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
K L D+ HLLFSANRWE+ + ++ G TL + DRYS+SG
Sbjct: 72 KSHLDDRTIHLLFSANRWEKRSLMETQLKNGTTLVV-----------------DRYSYSG 114
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
VAFS+AK G+DI WC PE GL PD VL + E R G+G ERYEQ +FQ+KVA+
Sbjct: 115 VAFSSAK-GLDIEWCKAPEVGLLAPDIVLYLDIPPEKAAERGGYGGERYEQLEFQKKVAK 173
Query: 182 NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
Y+ L D+ W IDA + I+ + ++D V+D +
Sbjct: 174 CYQALCDSSWKVIDACQPIEDIEKQLQDAVLDHV 207
>gi|302807401|ref|XP_002985395.1| hypothetical protein SELMODRAFT_122192 [Selaginella moellendorffii]
gi|300146858|gb|EFJ13525.1| hypothetical protein SELMODRAFT_122192 [Selaginella moellendorffii]
Length = 229
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 122/209 (58%), Gaps = 18/209 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DRSGK++Q +LV++L + + FPDRT + G I YL EL
Sbjct: 6 RGALIVLEGLDRSGKSSQCHRLVEFLKGTGLKVEAWRFPDRTTAIGSSISAYLGGGAELD 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+A HLLFSANRWE+ + + + G TL + DRYS+SGVAFSA
Sbjct: 66 DRAVHLLFSANRWEKRLQMERKLMAGTTLVV-----------------DRYSYSGVAFSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D+ WC PE GLP D VL ++ E R G+GDERYEQ DFQ+KVA Y+ L
Sbjct: 109 AK-GLDLEWCKAPEVGLPAADLVLYLDISPEEAAVRGGYGDERYEQLDFQKKVALQYKGL 167
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
+ W +DA + D + ++++ + T+
Sbjct: 168 QGKRWKIVDARQSFDQVHELMRETCVKTV 196
>gi|195436525|ref|XP_002066218.1| GK22056 [Drosophila willistoni]
gi|194162303|gb|EDW77204.1| GK22056 [Drosophila willistoni]
Length = 209
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 134/224 (59%), Gaps = 22/224 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS-TGHIIDEYLRKKI 63
+ RGAFIVFEGCDRSGKTTQ++ LV+ L N + + +NFP+R S G +I+ YL
Sbjct: 1 MQRGAFIVFEGCDRSGKTTQSRLLVEKLQANGVSTVHLNFPERKSSQIGQVINSYLTNSQ 60
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+LPD+ HL+FSANRWE + K +E G TL + DRYS+SGVA
Sbjct: 61 DLPDEVIHLMFSANRWEHLNRMRKQLEAGTTLVV-----------------DRYSYSGVA 103
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
++ AK G+D++WC+ PE+GL KPDAV K + L +R +G ERYE+ +FQRKV+ +
Sbjct: 104 YTVAK-GLDLNWCYAPERGLLKPDAVFYLKTELDELAKRGSYGTERYEKLEFQRKVSSVF 162
Query: 184 EKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
+ L + + W ++A ++ L + I +++ PL+
Sbjct: 163 DCLYERESSYWHRLNASDKVEDLHQQIAQISEKLLEQVATQPLD 206
>gi|195584457|ref|XP_002082023.1| GD25418 [Drosophila simulans]
gi|194194032|gb|EDX07608.1| GD25418 [Drosophila simulans]
Length = 211
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 133/222 (59%), Gaps = 21/222 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA I+FEGCDRSGKTTQ++ LV+ L IP+ +NFP+R+ S G +I+ YL +LP
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HL+FSANRWE + + + +G TL + DRYSFSGVA+SA
Sbjct: 66 DEVIHLMFSANRWEHMNQVKQKLLEGTTLVV-----------------DRYSFSGVAYSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC+ PE+GL KPDAV + L R +G+ERYE+ +FQ +VAE ++++
Sbjct: 109 AK-GLDFDWCYAPERGLIKPDAVFYLRAPSNDLTNRGQYGEERYEKVEFQGRVAEVFDRI 167
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ + + DA + ++ L + I + + K PL++
Sbjct: 168 CSKEASYFHKFDATQSVEDLHAQIGSITEELLPKVATQPLDT 209
>gi|321455804|gb|EFX66927.1| hypothetical protein DAPPUDRAFT_331571 [Daphnia pulex]
Length = 212
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 118/197 (59%), Gaps = 17/197 (8%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
I RGA IV EGCDRSGKTTQ +K + +L ++N + + FPDR+ G +I++YL E
Sbjct: 2 IKRGALIVLEGCDRSGKTTQCQKAIRWLQESNKEAHLMRFPDRSTIIGSLINKYLECSTE 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L D A HLLFSANRWE P + KL+++G + + DRYS+SG+AF
Sbjct: 62 LDDHAIHLLFSANRWELLPDIKKLLQKGTNVIV-----------------DRYSYSGIAF 104
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
SA+K MD+ WC Q + GL KPD V+ +N Q R +G ERYE + Q+ V NY
Sbjct: 105 SASKPNMDLRWCQQSDSGLLKPDLVIFLDINPVEAQTRGQYGSERYENLEMQKIVRSNYL 164
Query: 185 KLKDNIWIDIDADKDID 201
KL+D W +DA + ++
Sbjct: 165 KLQDESWRVVDASRSME 181
>gi|195150817|ref|XP_002016347.1| GL10538 [Drosophila persimilis]
gi|194110194|gb|EDW32237.1| GL10538 [Drosophila persimilis]
Length = 211
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 122/197 (61%), Gaps = 21/197 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA VFEGCDR GKTTQ++ L ++L IP+ +NFP+R STG +I+ YL +LP
Sbjct: 6 RGALFVFEGCDRCGKTTQSRLLAEFLKSKGIPTLSMNFPERESSTGQVINSYLTNSNDLP 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HL+FSANRWE + K + G TL + DRYS+SGVA++A
Sbjct: 66 DEVIHLMFSANRWEYMNKIRKELLAGTTLIV-----------------DRYSYSGVAYTA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC+ PE+GL KPDAV K + L R +G+ERYE+ +FQ+KVAE + ++
Sbjct: 109 AK-GLDFDWCYAPERGLIKPDAVFYLKTASDNLLSRGKYGEERYEKLEFQQKVAEVFNRI 167
Query: 187 ---KDNIWIDIDADKDI 200
+ + W IDA++ +
Sbjct: 168 CEQESSYWHQIDANQSV 184
>gi|328867446|gb|EGG15828.1| thymidylate kinase [Dictyostelium fasciculatum]
Length = 214
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 131/209 (62%), Gaps = 20/209 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYL-NKNNIPSQFVNFPDRTISTGHIIDEYLRKKI 63
+ RG FI+FEG DR GK+TQ +KL DYL N + ++ + FPDRT TG II+ YL+
Sbjct: 8 MKRGLFILFEGADRVGKSTQVQKLGDYLKNGLQLDAKVLRFPDRTTPTGSIINGYLQNTT 67
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+L D+A HLL++ANRWE + L KL+ G ++ + DRYS+SGVA
Sbjct: 68 QLDDRAIHLLYAANRWEAKDNLMKLLNSGTSIVV-----------------DRYSYSGVA 110
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
++AAK G+D+ WCF EKGLP+PD V+ K+ E R +G ERYE+ DFQ K+ + Y
Sbjct: 111 YTAAK-GIDVDWCFNCEKGLPEPDLVIYLKMTTEDATLRGEYGTERYEKVDFQNKIKQIY 169
Query: 184 EK-LKDNIWIDIDADKDIDTLGLIVKDIV 211
E+ L W I+A++DIDT+ + +I+
Sbjct: 170 EQHLIKPSWKVINANRDIDTVSNEINNII 198
>gi|255536995|ref|XP_002509564.1| thymidylate kinase, putative [Ricinus communis]
gi|223549463|gb|EEF50951.1| thymidylate kinase, putative [Ricinus communis]
Length = 264
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 125/213 (58%), Gaps = 18/213 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIV EG DRSGKT+Q KLV YL + ++ FPDRT + G +I YL + +L
Sbjct: 58 RGAFIVLEGLDRSGKTSQCGKLVSYLERLGHETELWRFPDRTTTIGQMISAYLSNQSQLD 117
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HLL+SANRWE+ + ++ G TL + DRYS+SGVAFSA
Sbjct: 118 DRTIHLLYSANRWEKNSLMETKLKSGTTLIV-----------------DRYSYSGVAFSA 160
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC PE GL PD VL + E R G+G ERYE+ +FQ KV Y+ L
Sbjct: 161 AK-GLDFEWCKAPEIGLLAPDLVLYLDIPPEKAAERGGYGGERYEKLEFQMKVGNCYQTL 219
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
+D+ W IDA + ++ + +++IV+D + S+
Sbjct: 220 RDSSWEIIDASQPMEEVQKQIQEIVLDHVLASE 252
>gi|357442919|ref|XP_003591737.1| Thymidylate kinase [Medicago truncatula]
gi|355480785|gb|AES61988.1| Thymidylate kinase [Medicago truncatula]
Length = 263
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 127/220 (57%), Gaps = 19/220 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DRSGK++Q +LV YL + ++ FPDRT + G +I YL +L
Sbjct: 58 RGALIVLEGLDRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLD 117
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE+ + ++ G TL + DRYS+SGVAFS+
Sbjct: 118 DHTIHLLFSANRWEKRSLMETKLKSGTTLIV-----------------DRYSYSGVAFSS 160
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+DI WC PE GL PD V ++ + R G+GDERYE+ +FQ+KVAE+Y+ L
Sbjct: 161 AK-GLDIDWCKAPENGLLAPDLVAYLDISPDKAAERGGYGDERYEKLEFQQKVAEHYKVL 219
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKS-QFSPLES 225
D W +DA + I + +++I + +K+ Q PL S
Sbjct: 220 HDASWKIVDACQPIQDVEKQLQEIALACVKQCQQGKPLSS 259
>gi|350416175|ref|XP_003490864.1| PREDICTED: thymidylate kinase-like [Bombus impatiens]
Length = 215
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 124/217 (57%), Gaps = 17/217 (7%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA +V EGCDR+GK+TQAK LV L + +IP + FPDRT +TG II+ YL KK+
Sbjct: 5 RGALVVLEGCDRAGKSTQAKLLVHALKQRDIPVEQRAFPDRTTATGEIINNYLSKKLNFS 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ AH+LFSANRWE + + + + G T+ I DRY+ SG A++A
Sbjct: 65 LETAHMLFSANRWECKDEILRSLYSGTTVVI-----------------DRYAGSGAAYTA 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
A G + WC P+KGLP PD V+ +++E R +GDERYE + Q VA NY K+
Sbjct: 108 ATTGRCLDWCKAPDKGLPSPDVVIFLNVSKETQCSRSNWGDERYENNEIQSHVASNYRKI 167
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
D W I+AD D + + ++D I + + P+
Sbjct: 168 MDQTWYIINADDDKSKIHSQILQKILDVIDQVKDLPV 204
>gi|242046716|ref|XP_002461104.1| hypothetical protein SORBIDRAFT_02g040820 [Sorghum bicolor]
gi|241924481|gb|EER97625.1| hypothetical protein SORBIDRAFT_02g040820 [Sorghum bicolor]
Length = 254
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 127/222 (57%), Gaps = 18/222 (8%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
+S+ RGA +V EG DRSGK++Q +L+ +L ++ FPDR S G +I YL
Sbjct: 46 SSKGGRGALVVLEGLDRSGKSSQCARLLSFLKGKGYDAEGWRFPDRATSVGQMISAYLAN 105
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+ +L D+ HLLFSANRWE+ + + G TL + DRYS+SG
Sbjct: 106 ESQLDDRTIHLLFSANRWEKRALMESKLLSGTTLVV-----------------DRYSYSG 148
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
VAFSAAK G+DI WC PE GL PD V+ + E R G+G ERYE+ +FQ+KVAE
Sbjct: 149 VAFSAAK-GLDIEWCKAPENGLIAPDLVIYLDVQPEKAAERGGYGGERYEKIEFQKKVAE 207
Query: 182 NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+Y L+ + W ID ++T+ ++D+ I++ Q +PL
Sbjct: 208 HYHSLRGSTWKVIDGSLPMETVEEKLRDLATSCIQERQGNPL 249
>gi|380030541|ref|XP_003698904.1| PREDICTED: thymidylate kinase-like [Apis florea]
Length = 214
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 135/219 (61%), Gaps = 17/219 (7%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
I RGA IV EGCDR+GK+TQAK L+ LN NIP + +FP+RT + G II+ +L KKIE
Sbjct: 3 IRRGALIVLEGCDRAGKSTQAKMLITALNNRNIPVELYSFPNRTTAIGEIINNFLTKKIE 62
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
LP + HLLFSANRWE + + K +++G TL I DRY+ SG A+
Sbjct: 63 LPSETIHLLFSANRWECKDEILKTLQKGTTLII-----------------DRYAASGAAY 105
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AA G +++WC +P+ GLP PD V+ +++++ R +GDER+E +FQ VA NYE
Sbjct: 106 TAATTGKNLNWCREPDSGLPSPDLVIYLSISKKSQSLRSNWGDERFENVEFQELVASNYE 165
Query: 185 KLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KL D W I+AD D + + + VID IK + P+
Sbjct: 166 KLIDKTWYVINADDDKSLIHSQILEKVIDIIKNIKHLPI 204
>gi|195487624|ref|XP_002091984.1| GE13938 [Drosophila yakuba]
gi|194178085|gb|EDW91696.1| GE13938 [Drosophila yakuba]
Length = 211
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 130/222 (58%), Gaps = 21/222 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA I+FEGCDRSGKTTQ++ LV+ L IP+ +NFP+R+ S G +I+ YL +L
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPALPMNFPERSSSIGQVINSYLTNSKDLK 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HL+FSANRWE + + + +G TL + DRYSFSGVA+S+
Sbjct: 66 DEVIHLMFSANRWEHMNQMKQKLLEGHTLVV-----------------DRYSFSGVAYSS 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC+ PE+GL KPDAV + L R +G+ERYE+ +FQ +VA+ +++L
Sbjct: 109 AK-GLDFDWCYAPERGLIKPDAVFYLRAPPNDLTNRGQYGEERYEKVEFQSRVAKVFDRL 167
Query: 187 KDN---IWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
N W DA + +D L + I + + PL++
Sbjct: 168 CANEASYWHQFDASQPVDELHARIASITEELLPTVATQPLDT 209
>gi|125808374|ref|XP_001360729.1| GA19108 [Drosophila pseudoobscura pseudoobscura]
gi|54635901|gb|EAL25304.1| GA19108 [Drosophila pseudoobscura pseudoobscura]
Length = 211
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 122/197 (61%), Gaps = 21/197 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA VFEGCDR GKTTQ++ L ++L IP+ +NFP+R STG +I+ YL +LP
Sbjct: 6 RGALFVFEGCDRCGKTTQSRLLAEFLKSKGIPTLSMNFPERESSTGQVINSYLTNSNDLP 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HL+FSANRWE + K + G TL + DRYS+SGVA++A
Sbjct: 66 DEVIHLMFSANRWEYMNKIRKELLAGTTLIV-----------------DRYSYSGVAYTA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC+ PE+GL KPDAV K + L R +G+ERYE+ +FQ+KVAE + ++
Sbjct: 109 AK-GLDFDWCYAPERGLIKPDAVFYLKTASDNLLSRGKYGEERYEKLEFQQKVAEVFNRI 167
Query: 187 ---KDNIWIDIDADKDI 200
+ + W IDA++ +
Sbjct: 168 CEQESSYWHQIDANQPV 184
>gi|219886119|gb|ACL53434.1| unknown [Zea mays]
gi|414590972|tpg|DAA41543.1| TPA: thymidylate kinase [Zea mays]
Length = 255
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 125/222 (56%), Gaps = 18/222 (8%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
S+ RGA +V EG DRSGKT+Q +L+ +L ++ FPDR S G +I YL
Sbjct: 47 GSKGGRGALVVLEGLDRSGKTSQCARLLSFLKGKGYNAEGWRFPDRATSVGQMISSYLAN 106
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+L D+ HLLFSANRWE+ + + G TL + DRYS+SG
Sbjct: 107 DSQLDDRTIHLLFSANRWEKRALMESKLLSGTTLIV-----------------DRYSYSG 149
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
VAFSAAK G+DI WC PE GL PD V+ + E R G+G ERYE+ +FQ+KVAE
Sbjct: 150 VAFSAAK-GLDIEWCKAPENGLIAPDLVIYLDVQPEKAAERGGYGGERYEKIEFQKKVAE 208
Query: 182 NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+Y L+D+ W +D ++T+ ++D+ I+ Q +PL
Sbjct: 209 HYHSLRDSTWKVVDGFLPMETVEEKLRDLATSCIQDCQGNPL 250
>gi|168050195|ref|XP_001777545.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671030|gb|EDQ57588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 226
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 18/213 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DRSGK++Q +L YL + + FPDRT + G +I YL + +L
Sbjct: 15 RGALIVLEGLDRSGKSSQCAQLASYLESQGVAVEAWRFPDRTTAMGRMISSYLSCQTDLD 74
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
A HLLFSANRWE+ + ++ G TL I DRYS+SGVAFS
Sbjct: 75 AAAIHLLFSANRWEKCSLMESKLKAGTTLVI-----------------DRYSYSGVAFSV 117
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D+ WC PE GLP PD V ++ E R G+G ERYE+ + Q+KV + ++ L
Sbjct: 118 AK-GLDLDWCKGPEAGLPAPDLVFYLDISAEVAAARGGYGGERYEKLEIQKKVEKVFKSL 176
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
KD W +DA + ID++ ++++ + I + Q
Sbjct: 177 KDTTWQSVDATQSIDSIQSVLREESVKAINECQ 209
>gi|126338564|ref|XP_001362301.1| PREDICTED: thymidylate kinase-like isoform 1 [Monodelphis
domestica]
Length = 212
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 130/220 (59%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GKTTQ +KLV L ++ P++ + FP+R+ G ++ YL KK +
Sbjct: 5 RGALIVLEGMDRAGKTTQGRKLVAALLQSGHPAELLRFPERSTEIGKLLGSYLEKKKNME 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE+ P + + + +G+TL + DRY+FSGVAF++
Sbjct: 65 DHTVHLLFSANRWEQVPLIKEKLSRGVTLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN-YEK 185
AKE + WC QP+ GLPKPD +L +L+ +R FG+ERYE FQ K + Y+
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDVILFLQLSSVEAAKRGDFGNERYENNTFQEKALQRFYQL 167
Query: 186 LKDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+KD+ W IDA K+I+ L + + +TI+ Q P+
Sbjct: 168 MKDDSLNWKTIDASKNIEDLHKEIYSLSEETIQMVQEMPV 207
>gi|116805956|emb|CAL26357.1| CG5757 [Drosophila melanogaster]
gi|116805970|emb|CAL26364.1| CG5757 [Drosophila melanogaster]
gi|223967375|emb|CAR93418.1| CG5757-PA [Drosophila melanogaster]
gi|223967383|emb|CAR93422.1| CG5757-PA [Drosophila melanogaster]
Length = 211
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 133/222 (59%), Gaps = 21/222 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA I+FEGCDRSGKTTQ++ LV+ L IP+ +NFP+R+ S G +I+ YL +LP
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HL+FSANRWE + + + +G TL + DRYSFSGVA+SA
Sbjct: 66 DEVIHLMFSANRWEHINQVKEKLLEGTTLVV-----------------DRYSFSGVAYSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC+ PE+GL KPDAV + L R +G ERYE+ +FQ +VAE ++++
Sbjct: 109 AK-GLDFDWCYAPERGLIKPDAVFYLRAPPNDLTHRGQYGKERYEKVEFQGRVAEVFDRI 167
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ + + DA + ++ L + +I + + K PL++
Sbjct: 168 CSKEGSYFHQFDARQSVEDLHAQIANITEELLPKVATRPLDT 209
>gi|321452944|gb|EFX64236.1| hypothetical protein DAPPUDRAFT_231894 [Daphnia pulex]
Length = 209
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 119/200 (59%), Gaps = 17/200 (8%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
I RGA IV EGCDRSGKTT +K + +L ++N + + FPDR+ G +I++YL E
Sbjct: 2 IKRGALIVLEGCDRSGKTTLCQKAIRWLQESNKEAHLMRFPDRSTIIGSLINKYLECSTE 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L D A HLLFSANRWE P + KL+++G + + DRYS+SG+AF
Sbjct: 62 LDDYAIHLLFSANRWELLPDIKKLLQKGTNVIV-----------------DRYSYSGIAF 104
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
SAAK MD+ WC Q + GL KPD V+ ++ Q R +G ERYE + Q+ V NY
Sbjct: 105 SAAKPNMDLRWCQQSDSGLLKPDLVIFLDIDPVEAQTRGQYGSERYENLEMQKVVRSNYL 164
Query: 185 KLKDNIWIDIDADKDIDTLG 204
KL+D W +DA + ++ +G
Sbjct: 165 KLQDESWKVVDASRSMEEVG 184
>gi|194880945|ref|XP_001974613.1| GG20995 [Drosophila erecta]
gi|190657800|gb|EDV55013.1| GG20995 [Drosophila erecta]
Length = 211
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 130/221 (58%), Gaps = 21/221 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA I+FEGCDRSGK+TQ++ LV LN IP+ +NFP+R+ G +I+ YL +LP
Sbjct: 6 RGALIIFEGCDRSGKSTQSQLLVALLNSKGIPALPMNFPERSSIIGQVINSYLTNSKDLP 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HL+FS NRWE + + + +G T+ + DRYSFSGVA+SA
Sbjct: 66 DEVIHLMFSTNRWEHMNYIKQNLHEGRTVVV-----------------DRYSFSGVAYSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC+ PE+GL KPDAV + L R +G+ERYE+ +FQ +VA+ ++++
Sbjct: 109 AK-GLDFDWCYAPERGLIKPDAVFYLRAPPADLTNRTQYGEERYEKVEFQGRVAKVFDRI 167
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
+ + W DA K ++ L + I + + K PLE
Sbjct: 168 CSEQGSYWHQFDATKPVEDLHAQIASITEELLPKVGTQPLE 208
>gi|125559330|gb|EAZ04866.1| hypothetical protein OsI_27045 [Oryza sativa Indica Group]
gi|125601251|gb|EAZ40827.1| hypothetical protein OsJ_25303 [Oryza sativa Japonica Group]
gi|215769070|dbj|BAH01299.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 253
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 126/224 (56%), Gaps = 18/224 (8%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
+SQ RGA IV EG DRSGK++Q +L+ +L ++ FPDR S G +I YL
Sbjct: 45 SSQGGRGALIVLEGLDRSGKSSQCARLLSFLQGKGCQAEGWRFPDRGTSVGQMISAYLAN 104
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+ EL D+ HLLFSANRWE+ + + + G TL + DRYS+SG
Sbjct: 105 ESELDDRTIHLLFSANRWEKRALMERKLLGGTTLIV-----------------DRYSYSG 147
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
VAFSAAK G+DI WC PE GL PD V+ + E R G+G ERYE+ +FQ+KV E
Sbjct: 148 VAFSAAK-GLDIEWCKAPENGLIAPDLVVYLDVQPEKAAERGGYGGERYEKIEFQKKVGE 206
Query: 182 NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+Y L+D+ W +D ++ + +K++ + I + Q L S
Sbjct: 207 HYHSLRDSTWKVVDGSLPMEVVEEQLKELAMSCILECQSKQLAS 250
>gi|116805958|emb|CAL26358.1| CG5757 [Drosophila melanogaster]
Length = 211
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 132/222 (59%), Gaps = 21/222 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA I+FEGCDRSGKTTQ++ LV+ L IP+ +NFP+R+ S G +I+ YL +LP
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HL+FSANRWE + + + +G TL + DRYSFSGVA+SA
Sbjct: 66 DEVIHLMFSANRWEHINQVKEKLLEGTTLVV-----------------DRYSFSGVAYSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC+ PE+GL KPDAV + L R +G ERYE+ +FQ +VAE ++++
Sbjct: 109 AK-GLDFDWCYAPERGLIKPDAVFYLRAPPNDLTHRGQYGKERYEKVEFQGRVAEVFDRI 167
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ + + DA + ++ L + I + + K PL++
Sbjct: 168 CSKEGSYFHQFDARQSVEDLHAQIASITEELLPKVATRPLDT 209
>gi|27261100|dbj|BAC45213.1| putative thymidylate kinase [Oryza sativa Japonica Group]
Length = 213
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 126/224 (56%), Gaps = 18/224 (8%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
+SQ RGA IV EG DRSGK++Q +L+ +L ++ FPDR S G +I YL
Sbjct: 5 SSQGGRGALIVLEGLDRSGKSSQCARLLSFLQGKGCQAEGWRFPDRGTSVGQMISAYLAN 64
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+ EL D+ HLLFSANRWE+ + + + G TL + DRYS+SG
Sbjct: 65 ESELDDRTIHLLFSANRWEKRALMERKLLGGTTLIV-----------------DRYSYSG 107
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
VAFSAAK G+DI WC PE GL PD V+ + E R G+G ERYE+ +FQ+KV E
Sbjct: 108 VAFSAAK-GLDIEWCKAPENGLIAPDLVVYLDVQPEKAAERGGYGGERYEKIEFQKKVGE 166
Query: 182 NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+Y L+D+ W +D ++ + +K++ + I + Q L S
Sbjct: 167 HYHSLRDSTWKVVDGSLPMEVVEEQLKELAMSCILECQSKQLAS 210
>gi|195027421|ref|XP_001986581.1| GH20447 [Drosophila grimshawi]
gi|193902581|gb|EDW01448.1| GH20447 [Drosophila grimshawi]
Length = 211
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 130/224 (58%), Gaps = 21/224 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIVFEGCDRSGKTTQ++ L L + + +NFPDRT + G +I+ YL +L
Sbjct: 6 RGAFIVFEGCDRSGKTTQSRHLSSVLTSKGVDIKQINFPDRTTTIGGMINAYLTNTQDLK 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HLLFSANRWE ++ K + G T+ DRYS+SG A+SA
Sbjct: 66 DEVIHLLFSANRWECVDSIKKDLLAGTTV-----------------ICDRYSYSGAAYSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC P++GL +PDAV K N + L R +G+ERYE+ DFQRKV E +++L
Sbjct: 109 AK-GVDFDWCCAPDRGLLEPDAVFYLKANLDELTSRGSYGEERYEKLDFQRKVGEQFDRL 167
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLESNK 227
+ + W +DA K + L + + ++++ PL + K
Sbjct: 168 YAQRSSYWHLLDASKSLQELQDQIAAVADGVLQQAAEQPLSTIK 211
>gi|116805954|emb|CAL26356.1| CG5757 [Drosophila melanogaster]
gi|116805960|emb|CAL26359.1| CG5757 [Drosophila melanogaster]
gi|116805962|emb|CAL26360.1| CG5757 [Drosophila melanogaster]
gi|116805964|emb|CAL26361.1| CG5757 [Drosophila melanogaster]
gi|116805966|emb|CAL26362.1| CG5757 [Drosophila melanogaster]
gi|116805968|emb|CAL26363.1| CG5757 [Drosophila melanogaster]
gi|116805972|emb|CAL26365.1| CG5757 [Drosophila melanogaster]
gi|116805974|emb|CAL26366.1| CG5757 [Drosophila melanogaster]
gi|116805976|emb|CAL26367.1| CG5757 [Drosophila melanogaster]
Length = 211
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 132/222 (59%), Gaps = 21/222 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA I+FEGCDRSGKTTQ++ LV+ L IP+ +NFP+R+ S G +I+ YL +LP
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HL+FSANRWE + + + +G TL + DRYSFSGVA+SA
Sbjct: 66 DEVIHLMFSANRWEHINQVKEKLLEGTTLVV-----------------DRYSFSGVAYSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC+ PE+GL KPDAV + L R +G ERYE+ +FQ +VAE ++++
Sbjct: 109 AK-GLDFDWCYAPERGLIKPDAVFYLRSPPNDLTHRGQYGKERYEKVEFQGRVAEVFDRI 167
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ + + DA + ++ L + I + + K PL++
Sbjct: 168 CSKEGSYFHQFDARQSVEDLHAQIASITEELLPKVATRPLDT 209
>gi|28573735|ref|NP_611290.3| CG5757, isoform A [Drosophila melanogaster]
gi|442624090|ref|NP_001261065.1| CG5757, isoform B [Drosophila melanogaster]
gi|28380736|gb|AAF57756.2| CG5757, isoform A [Drosophila melanogaster]
gi|220949114|gb|ACL87100.1| CG5757-PA [synthetic construct]
gi|220958186|gb|ACL91636.1| CG5757-PA [synthetic construct]
gi|223967371|emb|CAR93416.1| CG5757-PA [Drosophila melanogaster]
gi|223967373|emb|CAR93417.1| CG5757-PA [Drosophila melanogaster]
gi|223967377|emb|CAR93419.1| CG5757-PA [Drosophila melanogaster]
gi|223967379|emb|CAR93420.1| CG5757-PA [Drosophila melanogaster]
gi|223967385|emb|CAR93423.1| CG5757-PA [Drosophila melanogaster]
gi|223967387|emb|CAR93424.1| CG5757-PA [Drosophila melanogaster]
gi|223967391|emb|CAR93426.1| CG5757-PA [Drosophila melanogaster]
gi|440214494|gb|AGB93597.1| CG5757, isoform B [Drosophila melanogaster]
Length = 211
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 131/222 (59%), Gaps = 21/222 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA I+FEGCDRSGKTTQ++ LV+ L IP+ +NFP+R+ S G +I+ YL +LP
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HL+FSANRWE + + + +G TL + DRYSFSGVA+SA
Sbjct: 66 DEVIHLMFSANRWEHINQVKEKLLEGTTLVV-----------------DRYSFSGVAYSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC+ PE+GL KPDAV + L R +G ERYE+ +FQ +VAE + ++
Sbjct: 109 AK-GLDFDWCYAPERGLIKPDAVFYLRAPPNDLTHRGQYGKERYEKVEFQGRVAEVFNRI 167
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ + + DA + ++ L + I + + K PL++
Sbjct: 168 CSKEGSYFHQFDARQSVEDLHAQIASITEELLPKVATRPLDT 209
>gi|40215537|gb|AAL48064.2| RE69454p [Drosophila melanogaster]
Length = 225
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 131/222 (59%), Gaps = 21/222 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA I+FEGCDRSGKTTQ++ LV+ L IP+ +NFP+R+ S G +I+ YL +LP
Sbjct: 20 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 79
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HL+FSANRWE + + + +G TL + DRYSFSGVA+SA
Sbjct: 80 DEVIHLMFSANRWEHINQVKEKLLEGTTLVV-----------------DRYSFSGVAYSA 122
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC+ PE+GL KPDAV + L R +G ERYE+ +FQ +VAE + ++
Sbjct: 123 AK-GLDFDWCYAPERGLIKPDAVFYLRAPPNDLTHRGQYGKERYEKVEFQGRVAEVFNRI 181
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ + + DA + ++ L + I + + K PL++
Sbjct: 182 CSKEGSYFHQFDARQSVEDLHAQIASITEELLPKVATRPLDT 223
>gi|344299094|ref|XP_003421223.1| PREDICTED: thymidylate kinase-like [Loxodonta africana]
Length = 212
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 129/220 (58%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV L ++ + FP+R+ G +++ YL KK E+
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVAALCAAGHRAELLRFPERSTEIGKLLNSYLEKKNEVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + ++QG+TL + DRY+FSGVAF+A
Sbjct: 65 DHSVHLLFSANRWEQVPLIRNKLDQGVTLIV-----------------DRYAFSGVAFTA 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLP+PD VL +L RR GFG ERYE FQ + +++L
Sbjct: 108 AKENFSVDWCKQPDVGLPRPDLVLFLQLQLADAARRGGFGQERYEDRAFQERALHCFQQL 167
Query: 187 KDNIWID---IDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ +D IDA + ++ + V+ + D I+ + +PL
Sbjct: 168 MQDPSLDCKTIDASRSVEDVHKEVRALSEDAIRAAAQTPL 207
>gi|346471783|gb|AEO35736.1| hypothetical protein [Amblyomma maculatum]
Length = 214
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 123/216 (56%), Gaps = 23/216 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FIVFEGCDR+GK+TQ K L + L + + FP RT +TG ++D YL++ L
Sbjct: 6 RGLFIVFEGCDRTGKSTQVKLLAEVLAGKGHKTDTIAFPKRTTATGKLLDGYLKESTNLD 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRW+ + + + + T+ DRY++SGVAFSA
Sbjct: 66 DHAVHLLFSANRWQEAQAIRQTVARHTTV-----------------ICDRYAYSGVAFSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK +D +WC QP+KGLP+PD V + E L R GFG ERYE+ +FQ KV NYE+
Sbjct: 109 AKS-LDFTWCQQPDKGLPEPDLVFYMSASPEVLNARDGFGTERYEKVEFQTKVRANYERF 167
Query: 187 K-----DNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
W++ID+ + I+ + + V+D + +
Sbjct: 168 AALESGSGRWVNIDSARSIEEVHRDILSCVLDVLSR 203
>gi|223967381|emb|CAR93421.1| CG5757-PA [Drosophila melanogaster]
gi|223967389|emb|CAR93425.1| CG5757-PA [Drosophila melanogaster]
gi|223967393|emb|CAR93427.1| CG5757-PA [Drosophila melanogaster]
Length = 211
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 132/222 (59%), Gaps = 21/222 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA I+FEGCDRSGKTTQ++ LV+ L IP+ +NFP+R+ S G +I+ YL +LP
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HL+FSANRWE + + + +G TL + DRYSFSGVA+SA
Sbjct: 66 DEVIHLMFSANRWEHINQVKEKLLEGTTLVV-----------------DRYSFSGVAYSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC+ PE+GL KPDAV + L R +G ERYE+ +FQ +VAE ++++
Sbjct: 109 AK-GLDFDWCYAPERGLIKPDAVFYLRSPPNDLTYRGQYGKERYEKVEFQGRVAEVFDRI 167
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ + + DA + ++ L + I + + K PL++
Sbjct: 168 CSKEGSYFHQFDARQSVEDLHAQIASITEELLPKVATRPLDT 209
>gi|340711578|ref|XP_003394352.1| PREDICTED: thymidylate kinase-like [Bombus terrestris]
Length = 215
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 124/217 (57%), Gaps = 17/217 (7%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EGCDR+GK+TQAK LV+ L + IP + FPDRT +TG II+ YL KK+
Sbjct: 5 RGALIVLEGCDRAGKSTQAKLLVNALKQRGIPVEQRAFPDRTTATGEIINNYLNKKLNFS 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ AH+LFSANRWE + + K + G T+ I DRY+ SG A++A
Sbjct: 65 LETAHMLFSANRWECKDEILKSLYSGTTVVI-----------------DRYAGSGAAYTA 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
A ++WC P++GLP PD V+ ++ E R +G ERYE + Q VA NY+K+
Sbjct: 108 AMTNRCLNWCKAPDRGLPSPDVVIFLNVSNETQCSRSNWGSERYENNEIQSHVASNYKKI 167
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
D W I+A+ + ++ + V+D I K + P+
Sbjct: 168 MDQTWYIINANDNKSSIHSQILQKVLDIIDKVKNLPI 204
>gi|348690421|gb|EGZ30235.1| hypothetical protein PHYSODRAFT_263927 [Phytophthora sojae]
Length = 214
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 119/222 (53%), Gaps = 22/222 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNI--PSQFVNFPDRTISTGHIIDEYLRKKIE 64
RG F++FEG DR GKTTQ K L + LN ++ PS ++FPDR+ + G I YL
Sbjct: 4 RGIFVLFEGVDRCGKTTQTKLLHEALNASSPAQPSALLHFPDRSTAIGQSIHSYLTSSEA 63
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ D A HLLFSANRWE + L+ G Q DRYSFSGVAF
Sbjct: 64 MDDHAIHLLFSANRWEAASKIESLLASG-----------------QHIIMDRYSFSGVAF 106
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
SAAK GM + WC+ PE GLPKPDAV+ + R FG ERYE T FQ KV +N+
Sbjct: 107 SAAKSGMSLDWCWAPEIGLPKPDAVIFLDVPVTQASTRADFGQERYETTAFQEKVYQNFH 166
Query: 185 KLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ + W +DA I+ + V I DTI K +PL
Sbjct: 167 DIMERTTPKWHVVDATGTIEQVHDEVMAITKDTIAKYAETPL 208
>gi|417408676|gb|JAA50878.1| Putative thymidylate kinase/adenylate kinase, partial [Desmodus
rotundus]
Length = 210
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 132/221 (59%), Gaps = 20/221 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ+ KLV+ L + ++ + FP+R+ G +++ YL+KK E+
Sbjct: 3 RGALIVLEGMDRAGKSTQSGKLVEALCADGHRAELLRFPERSTEIGKLLNSYLKKKSEVE 62
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF++
Sbjct: 63 DHAVHLLFSANRWEQVPLMKEKLSQGVTLIV-----------------DRYAFSGVAFTS 105
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD V+ +L E +R FG ERYE DFQ +V + + +L
Sbjct: 106 AKEHFCLHWCKQPDMGLPKPDLVMFLQLQLEEAVKRGEFGCERYENRDFQERVLQRFHQL 165
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
+ W ++A + I+ + ++ + + I+ + PLE
Sbjct: 166 MGDRTLNWKMVNASRSIEDVHKEIRMLSEEAIQATAQKPLE 206
>gi|392589555|gb|EIW78885.1| thymidylate kinase [Coniophora puteana RWD-64-598 SS2]
Length = 221
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 129/227 (56%), Gaps = 31/227 (13%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYL---NKNNIPSQFVNFPDRTISTGHIIDE 57
MASQ RG FIVFEG DRSGK+TQ + L L + ++ + + FPDRT G IID
Sbjct: 1 MASQQKRGMFIVFEGLDRSGKSTQVELLRQELIRESGSDTSTVTMKFPDRTTPIGQIIDS 60
Query: 58 YLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
YL+++ L DQA HLLFSANRWE + +E G+T+ + DRY
Sbjct: 61 YLQQQTSLDDQAIHLLFSANRWEDASDIMSHLESGVTVIV-----------------DRY 103
Query: 118 SFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQR 177
+FSGVAFS K G WC P++GLP PD +L +N E R G+GDERYEQ Q+
Sbjct: 104 AFSGVAFSLQK-GFSYEWCQSPDRGLPAPDLILFLDINPEVAGSRGGYGDERYEQKKVQK 162
Query: 178 KVAENYEKLKDNI------WIDIDADKDIDTLGLIVKDIVIDTIKKS 218
V E + +K+ + W+DIDA + ++ VKD V+ ++++
Sbjct: 163 SVLEAFSCVKNEVIKEGYKWVDIDASQGVNQ----VKDAVLKAVREA 205
>gi|326925772|ref|XP_003209083.1| PREDICTED: thymidylate kinase-like isoform 1 [Meleagris gallopavo]
Length = 212
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 126/220 (57%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ+++LV L + + FP+RT G +I YL ++ EL
Sbjct: 5 RGALIVLEGMDRAGKSTQSRRLVQALQAAGHRADLLRFPERTTEIGRLIGAYLSRERELE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE ++ + + QGITL + DRY+FSGVAF++
Sbjct: 65 DHVVHLLFSANRWEHVTSMKEKLHQGITLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD +L +L+ E R FG ERYE FQ+KV +++ L
Sbjct: 108 AKENFCLEWCKQPDVGLPKPDLILFLQLSPEEAAARGNFGRERYENGPFQKKVLQSFHHL 167
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
K W +DA K I+ L +K + T+++ + PL
Sbjct: 168 MNEKTLNWKTMDASKSIEDLHREIKTVAEKTMQEVKDKPL 207
>gi|66804303|ref|XP_635930.1| thymidylate kinase [Dictyostelium discoideum AX4]
gi|74851984|sp|Q54GN2.1|KTHY_DICDI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|60464271|gb|EAL62422.1| thymidylate kinase [Dictyostelium discoideum AX4]
Length = 222
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 133/223 (59%), Gaps = 20/223 (8%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYL-NKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
+ I RG FI+FEG DR GK+TQ + L +++ N +P++ + FPDRT G II++YL+
Sbjct: 14 TMIKRGLFILFEGVDRVGKSTQVQSLTNHISNVQKLPTKSLRFPDRTTPIGQIINQYLQN 73
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+ D+A HLLFS+NRWE ++ +L+ G + + DRYS+SG
Sbjct: 74 ATNMDDRALHLLFSSNRWEARDSILELLNNGTNIVV-----------------DRYSYSG 116
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
VA+SAAK G+D WC+ EKGLPKPD + ++ E +R +G ERYE+ +FQ+K+ +
Sbjct: 117 VAYSAAK-GIDFDWCYACEKGLPKPDLIFYLSMSSEDATKRGEYGGERYEKLEFQKKIKQ 175
Query: 182 NY-EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
Y EKL D+ W I+A++ ID + + I KK Q + +
Sbjct: 176 IYEEKLVDDQWKIINANRSIDEISNEISSIFDSEFKKIQLTSI 218
>gi|167516318|ref|XP_001742500.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779124|gb|EDQ92738.1| predicted protein [Monosiga brevicollis MX1]
Length = 171
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 119/177 (67%), Gaps = 21/177 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIP--SQFVNFPDRTISTGHIIDEYLRKKIE 64
RG IV EGCDR GK+TQ +LV++L KN+ P ++ + FPDRT G +I++YLRK+IE
Sbjct: 3 RGLLIVLEGCDRCGKSTQCGRLVEWL-KNHRPNGAESMRFPDRTTQIGSLINQYLRKEIE 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
LPD+AAHLLFSANRWE + + + G++L + DRY+FSGVAF
Sbjct: 62 LPDKAAHLLFSANRWELRDEIERKLANGVSLVV-----------------DRYAFSGVAF 104
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
++AK G+D+ WC QP+ GLP PD ++ +L++ + R GFG+ERYE ++FQ KV E
Sbjct: 105 TSAK-GLDVEWCKQPDAGLPVPDVLIHMELSQSEAESRGGFGEERYEVSEFQAKVKE 160
>gi|395528688|ref|XP_003766459.1| PREDICTED: thymidylate kinase isoform 1 [Sarcophilus harrisii]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 130/220 (59%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ +KLV L ++ ++ + FP+R+ G ++ YL KK +
Sbjct: 5 RGALIVLEGMDRAGKSTQCRKLVTTLLESGHRAELLRFPERSTEIGKLLSAYLEKKSNME 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF++
Sbjct: 65 DHTVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN-YEK 185
AKE ++WC QP+ GLPKPD +L +L+ + +R FG ERYE FQ K + Y+
Sbjct: 108 AKENFSLNWCKQPDVGLPKPDLILFLQLSSQEAAKRGDFGTERYENNAFQEKALQCFYQL 167
Query: 186 LKDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+KD+ W I+A + I+ L + + +TI+ Q +P+
Sbjct: 168 MKDDSLNWKTINASQSIEDLHKEIYSLAEETIQMVQETPM 207
>gi|123438337|ref|XP_001309954.1| thymidylate kinase family protein [Trichomonas vaginalis G3]
gi|121891703|gb|EAX97024.1| thymidylate kinase family protein [Trichomonas vaginalis G3]
Length = 194
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 124/206 (60%), Gaps = 22/206 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPS-QFVNFPDRTISTGHIIDEYLRKKIEL 65
RG FI+FEGCD SGK+TQ K L N P + + FPDRT G +I+ YL+K L
Sbjct: 4 RGKFILFEGCDGSGKSTQCKLLA---NSGLFPKVEQMCFPDRTTEIGQMINAYLKKSSNL 60
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D+A HLLF+ANRWE P + +L+ G T+ DRY +SGV +S
Sbjct: 61 VDEAIHLLFTANRWELSPKIKELLNNGTTI-----------------ICDRYYYSGVVYS 103
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
AAK GMD+ WC PEKGLP+PD V+ ++ E +RKGFG+E YE+T+FQ KV E +
Sbjct: 104 AAK-GMDVDWCLAPEKGLPQPDLVIFIDISPEVQAKRKGFGEEIYEKTEFQNKVRELFLS 162
Query: 186 LKDNIWIDIDADKDIDTLGLIVKDIV 211
LKD+ W ID ++ ++ + ++ ++
Sbjct: 163 LKDDRWRIIDGNQPLEKVSEDIQKVI 188
>gi|49456925|emb|CAG46783.1| DTYMK [Homo sapiens]
Length = 212
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 127/220 (57%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D +AHLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHSAHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL 167
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K I+ + ++ + D I+ + PL
Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPL 207
>gi|427798599|gb|JAA64751.1| Putative thymidylate kinase/adenylate kinase, partial
[Rhipicephalus pulchellus]
Length = 184
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 117/195 (60%), Gaps = 23/195 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FIVFEGCDR+GKTTQ K L + L ++ + FP R+ +TG ++D YL K L
Sbjct: 5 RGLFIVFEGCDRTGKTTQVKLLAEALAGLGHKTECIAFPKRSTATGKLLDAYLTKGANLD 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRW+ ++ + + Q T+ DRY++SGVAF+A
Sbjct: 65 DHAVHLLFSANRWQESESIRQAVAQQRTV-----------------ICDRYAYSGVAFTA 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK +D +WC QP++GLP+PD VL + +AL R GFG+ERYE +FQ KV NY++L
Sbjct: 108 AKS-LDFAWCQQPDRGLPEPDVVLYMSVPPDALDARDGFGNERYENAEFQAKVRANYDRL 166
Query: 187 K-----DNIWIDIDA 196
W+++DA
Sbjct: 167 AALDSGSGRWVNVDA 181
>gi|426218485|ref|XP_004003477.1| PREDICTED: LOW QUALITY PROTEIN: thymidylate kinase, partial [Ovis
aries]
Length = 209
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 126/220 (57%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLVD L ++ + FP+R+ G ++ YL KK E+
Sbjct: 2 RGALIVLEGVDRAGKSTQSRKLVDALCAEGHRAELLRFPERSTEIGKLLSSYLEKKSEVE 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE P + + + QGITL + DRY+FSGVAF++
Sbjct: 62 DHSVHLLFSANRWEHVPLMKEKLSQGITLVV-----------------DRYAFSGVAFTS 104
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD V+ +L R FG ERYE FQ++ + +++L
Sbjct: 105 AKENFSLDWCKQPDVGLPKPDLVVFLQLQLAEAAARGEFGRERYESGPFQQRALQRFQQL 164
Query: 187 KDN---IWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ W ++A + I+ + ++ + D I+ + PL
Sbjct: 165 LADPSLPWKTVNASRSIEDVHREIRALSEDAIRAAAHXPL 204
>gi|298709115|emb|CBJ31061.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 228
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 133/235 (56%), Gaps = 26/235 (11%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
A RGAFI+FEG DR GKTTQA LV+ L + + F+ FPDRT GH+I+ +LR
Sbjct: 9 AGPAKRGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLRN 68
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
++ D+ HLLFSANRWE E + +L++ G T+ DRY++SG
Sbjct: 69 TTDIDDRCVHLLFSANRWEAESKIRELLKAGTTV-----------------VCDRYAYSG 111
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
VAFSA+K G+ + WC P++GLP PD +L ++ E +R FG+ERYE+ +FQR V
Sbjct: 112 VAFSASKPGLSVRWCKDPDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEEFQRTVRA 171
Query: 182 NY------EKLKDNIWIDIDADKDIDTLGLIVKDI---VIDTIKKSQFSPLESNK 227
+ +K W IDA+++I ++ ++ I V+ ++ + L S K
Sbjct: 172 TFLALMEEDKASGVAWQLIDANREIGSIQDEIQKIGTSVVGEVEGKEIGSLWSRK 226
>gi|296206035|ref|XP_002750035.1| PREDICTED: thymidylate kinase isoform 1 [Callithrix jacchus]
Length = 212
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 124/220 (56%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLVD L ++ + FP+R+ G ++ YL KK +L
Sbjct: 5 RGALIVLEGMDRAGKSTQSRKLVDALCALGHRAELLRFPERSTEIGKLLSSYLEKKSDLE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAFS
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVM-----------------DRYAFSGVAFSG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLP+PD VL +L +R FG ERYE FQ + + + +L
Sbjct: 108 AKENFSLDWCKQPDVGLPRPDLVLFLQLQLADAAKRSAFGHERYENGAFQERALQCFHQL 167
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ W +DA K I+ + + + D I+ + PL
Sbjct: 168 MRDTTVNWKMVDASKSIEAVHEDILVLAEDAIRTATEKPL 207
>gi|449548017|gb|EMD38984.1| hypothetical protein CERSUDRAFT_112696 [Ceriporiopsis subvermispora
B]
Length = 227
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 121/203 (59%), Gaps = 23/203 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIV EG DRSGK+TQ+ +L++ L I ++ +NFPDRT + G +ID YLR + EL
Sbjct: 7 RGAFIVVEGLDRSGKSTQSTQLLEKLRSAGIDAKLLNFPDRTTTIGKMIDSYLRSESELD 66
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+A HLLFSANRWE SS+E+ DRY+FSG+AFSA
Sbjct: 67 DRAIHLLFSANRWE-----------------AASSIESSLRAGTLILCDRYAFSGLAFSA 109
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+ +WC P+ GLP PD LL ++ E +R GFG ERYE+ + Q +V +E++
Sbjct: 110 AK-GLPYTWCRAPDVGLPAPDLTLLLDVSPEQQAKRGGFGAERYEKAEMQERVRAVFERV 168
Query: 187 KDNI-----WIDIDADKDIDTLG 204
D + W+ +DAD + D +
Sbjct: 169 GDEMGAGGRWVVVDADAEQDAVA 191
>gi|301118893|ref|XP_002907174.1| thymidylate kinase [Phytophthora infestans T30-4]
gi|262105686|gb|EEY63738.1| thymidylate kinase [Phytophthora infestans T30-4]
Length = 216
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 118/222 (53%), Gaps = 22/222 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNI--PSQFVNFPDRTISTGHIIDEYLRKKIE 64
RG F++FEG DR GKTTQ K L D LN ++ PS ++FPDR+ + G I YL
Sbjct: 4 RGIFLLFEGVDRCGKTTQTKLLHDALNASSSSQPSALLHFPDRSTAIGKSIHSYLTSSEA 63
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ D HLLFSANRWE + ++ G Q DRYSFSGVAF
Sbjct: 64 MDDHVIHLLFSANRWEAASKIESILASG-----------------QHIIMDRYSFSGVAF 106
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
SAAK GM + WC+ PE GLPKPDA++ + R FG ERYE T FQ KV N+
Sbjct: 107 SAAKSGMSLDWCWAPEIGLPKPDAIIFLDVPVTQASTRADFGQERYETTAFQEKVYRNFY 166
Query: 185 KLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ + W +DA I+ + V I +TIKK SPL
Sbjct: 167 DIMERATPKWHVVDATGTIEQVQEKVMAIAKETIKKYAESPL 208
>gi|426339163|ref|XP_004033529.1| PREDICTED: thymidylate kinase isoform 1 [Gorilla gorilla gorilla]
Length = 212
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGYRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL 167
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K I+ + ++ + D I+ + PL
Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPL 207
>gi|323446155|gb|EGB02432.1| hypothetical protein AURANDRAFT_35261 [Aureococcus anophagefferens]
gi|323448063|gb|EGB03967.1| hypothetical protein AURANDRAFT_33306 [Aureococcus anophagefferens]
Length = 214
Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 122/198 (61%), Gaps = 18/198 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG F+VFEG DRSGK+TQ K LV+ L ++ FP+R+ G +ID+YL++++EL
Sbjct: 9 RGVFVVFEGVDRSGKSTQCKLLVEGLRAKGRSAELRRFPERSTGIGQLIDKYLKRELELD 68
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+A HLLFSANRW+ + + + G+ D C DRY+FSGVAFSA
Sbjct: 69 DRAVHLLFSANRWDEAAKIERALASGV---------------DVVC--DRYAFSGVAFSA 111
Query: 127 AKEGM-DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
AK + D+ WC P+ GLPKPD V+ ++ + R GFGDERYE++ Q++VA+++
Sbjct: 112 AKPNIDDLDWCKAPDAGLPKPDVVVFLEIPAAKAEARGGFGDERYEESAMQKRVAQHFVD 171
Query: 186 LKDNIWIDIDADKDIDTL 203
L+ W +DA + +D +
Sbjct: 172 LRGPSWRVLDAARTVDEV 189
>gi|359545626|pdb|2XX3|A Chain A, Human Thymidylate Kinase Complexed With Thymidine Butenyl
Phosphonate Monophosphate And Adp
Length = 232
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 25 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 84
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 85 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 127
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 128 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL 187
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K I+ + ++ + D I+ + PL
Sbjct: 188 MKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPL 227
>gi|291900|gb|AAA21719.1| thymidylate kinase [Homo sapiens]
Length = 212
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLKKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL 167
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K I+ + ++ + D I+ + PL
Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEELRVLSEDAIRTATEKPL 207
>gi|42544174|ref|NP_036277.2| thymidylate kinase isoform 1 [Homo sapiens]
gi|114584335|ref|XP_001161768.1| PREDICTED: uncharacterized protein LOC744320 isoform 3 [Pan
troglodytes]
gi|397483839|ref|XP_003813098.1| PREDICTED: thymidylate kinase [Pan paniscus]
gi|56405325|sp|P23919.4|KTHY_HUMAN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|12804775|gb|AAH01827.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens]
gi|49456983|emb|CAG46812.1| DTYMK [Homo sapiens]
gi|62822371|gb|AAY14920.1| unknown [Homo sapiens]
gi|119591690|gb|EAW71284.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_b [Homo
sapiens]
gi|187955102|gb|AAI47007.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens]
gi|187955947|gb|AAI47011.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens]
gi|410208480|gb|JAA01459.1| deoxythymidylate kinase (thymidylate kinase) [Pan troglodytes]
gi|410248952|gb|JAA12443.1| deoxythymidylate kinase (thymidylate kinase) [Pan troglodytes]
gi|410300456|gb|JAA28828.1| deoxythymidylate kinase (thymidylate kinase) [Pan troglodytes]
gi|410330053|gb|JAA33973.1| deoxythymidylate kinase (thymidylate kinase) [Pan troglodytes]
Length = 212
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL 167
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K I+ + ++ + D I+ + PL
Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPL 207
>gi|119591691|gb|EAW71285.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_c [Homo
sapiens]
Length = 254
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL 167
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K I+ + ++ + D I+ + PL
Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPL 207
>gi|33303857|gb|AAQ02442.1| deoxythymidylate kinase [synthetic construct]
gi|54696972|gb|AAV38858.1| deoxythymidylate kinase (thymidylate kinase) [synthetic construct]
Length = 213
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL 167
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K I+ + ++ + D I+ + PL
Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPL 207
>gi|16975360|pdb|1E98|A Chain A, Wild Type Human Thymidylate Kinase Complexed With Aztmp
And Adp
Length = 215
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 8 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 67
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 68 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 110
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 111 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL 170
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K I+ + ++ + D I+ + PL
Sbjct: 171 MKDTTLNWKMVDASKRIEAVHEEIRVLSEDAIRTATEKPL 210
>gi|60831889|gb|AAX36988.1| deoxythymidylate kinase [synthetic construct]
Length = 213
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL 167
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K I+ + ++ + D I+ + PL
Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPL 207
>gi|325187412|emb|CCA21950.1| thymidylate kinase putative [Albugo laibachii Nc14]
Length = 228
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 132/228 (57%), Gaps = 26/228 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE-L 65
RG FI+ EG D GKTTQ K L + L K + ++ + FPDRT TG +ID YL K E +
Sbjct: 5 RGVFILIEGLDCCGKTTQTKLLHEALTKMSSAAELLRFPDRTTPTGKLIDAYLTSKDEQV 64
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D+A HLLF+ANRWE + ++ G KN+ DRY++SG FS
Sbjct: 65 NDRAIHLLFTANRWEAAEKIEAILNSG-------------KNI----VMDRYAYSGAVFS 107
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
A+K GMD++WC+QPE GLP+PDAV+ L ++ +R+ +G ERYE +FQ KV N+ K
Sbjct: 108 ASKSGMDMNWCWQPEIGLPRPDAVIFLDLPVDSASKREDYGAERYENVEFQEKVRLNFHK 167
Query: 186 L--------KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
L ++ W IDA+ I+ + V ++ I+ SQ++PL S
Sbjct: 168 LIELDHSQKDESRWHFIDANDTIEKVQARVFEVAQRCIQVSQYTPLAS 215
>gi|296488737|tpg|DAA30850.1| TPA: thymidylate kinase [Bos taurus]
gi|440901287|gb|ELR52262.1| Thymidylate kinase [Bos grunniens mutus]
Length = 212
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 126/220 (57%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLVD L ++ + FP+R+ G ++ YL KK E+
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVDALCAEGHRAELLRFPERSTEIGKLLSSYLEKKSEVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE P + + + QG+TL + DRY+FSGVAF++
Sbjct: 65 DHSVHLLFSANRWEHVPLMKEKLSQGVTLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD V+ +L R FG ERYE FQ++ + +++L
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDLVVFLQLQLAEAAARGEFGRERYESGPFQQRALQRFQQL 167
Query: 187 KDN---IWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ W ++A + I+ + ++ + D I+ + PL
Sbjct: 168 LADPSLPWKMVNASRSIEDVHREIRALSEDAIRAAAHRPL 207
>gi|195383450|ref|XP_002050439.1| GJ22153 [Drosophila virilis]
gi|194145236|gb|EDW61632.1| GJ22153 [Drosophila virilis]
Length = 211
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 125/220 (56%), Gaps = 21/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IVFEGCDR GKTTQ ++L + L + + NFPDR+ + G++I+ YL+ EL
Sbjct: 6 RGALIVFEGCDRCGKTTQNRQLFELLTGKGVDTMQTNFPDRSTAIGNVINHYLQNNQELS 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HLLFSANRWER ++ K + G T+ DRY++SGVA+S
Sbjct: 66 DEVIHLLFSANRWERMNSIKKDLLAGTTV-----------------ICDRYAYSGVAYSV 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D +WC+ PE GL KPDAV K + L R +G+ERYE+ DFQRKV + +++
Sbjct: 109 AK-GLDFNWCWAPEIGLLKPDAVFYLKATPDELTTRGNYGEERYEKLDFQRKVGQIFDRF 167
Query: 187 KD---NIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ + W +A K L + + + +S PL
Sbjct: 168 SEKDSSYWHTFEASKSQQELHAQIAIVAEKIVMQSAEKPL 207
>gi|357121763|ref|XP_003562587.1| PREDICTED: thymidylate kinase-like [Brachypodium distachyon]
Length = 252
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 123/213 (57%), Gaps = 18/213 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DRSGKT+Q +L+ +L ++ FPDR S G +I YL + +L
Sbjct: 49 RGALIVLEGLDRSGKTSQCARLLSFLQGKGCLAEAWRFPDRETSVGKMISAYLANESQLD 108
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HLLFSANRWE+ + + G TL + DRYS+SG+AFSA
Sbjct: 109 DRTIHLLFSANRWEKRNLMESKLLGGTTLVV-----------------DRYSYSGLAFSA 151
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G++I WC PE GL PD V+ + E R G+G ERYE+ +FQ++VAE+Y L
Sbjct: 152 AK-GLEIEWCKAPEVGLLAPDLVIYLDVQPEKAAERGGYGGERYERVEFQKRVAEHYHSL 210
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
+D+ W +D ++T+ ++++ ++ I + Q
Sbjct: 211 RDSTWKVVDGSLPMETVQEQLRELAMNCISECQ 243
>gi|15078963|ref|NP_149714.1| 251L [Invertebrate iridescent virus 6]
gi|82012170|sp|Q91FS1.1|KTHY_IIV6 RecName: Full=Putative thymidylate kinase 251L; AltName: Full=dTMP
kinase
gi|15042332|gb|AAK82112.1|AF303741_251 251L [Invertebrate iridescent virus 6]
Length = 213
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 133/222 (59%), Gaps = 26/222 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG IVFEGCD++GK+TQ K L + L + NI + +NFP+RT TG +ID+YL+ KI L
Sbjct: 13 RGLLIVFEGCDKTGKSTQCKLLFEELKQKNIEVRMINFPNRTTQTGKLIDQYLKGKIYLS 72
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ H+LFS NRWE T+ I GIT+ I DRYS+SG+AFS
Sbjct: 73 DEDIHILFSKNRWEIIDTIKTNILNGITVII-----------------DRYSYSGIAFSV 115
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC Q E GL KPD ++ + + R G+G E YE+ + Q KV + YEK+
Sbjct: 116 AK-GLDFQWCKQTENGLLKPDIIIYLTGQTKNMASRNGYGSEIYERIEIQDKVKKCYEKM 174
Query: 187 KD-NIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLESNK 227
+ +W I+AD+D+ LI+K + I+K FS LE+NK
Sbjct: 175 IEIPLWNKINADQDV----LIIKKQIETIIQK--FS-LENNK 209
>gi|14488796|pdb|1E2D|A Chain A, Human Thymidylate Kinase Complexed With Thymidine
Monophosphate, Adenosine Diphosphate And A Magnesium-Ion
gi|14488797|pdb|1E2E|A Chain A, Human Thymidylate Kinase Complexed With Thymidine
Monophosphate, Adenosine Diphosphate,A Magnesium-Ion And
Alf3
gi|14488798|pdb|1E2F|A Chain A, Human Thymidylate Kinase Complexed With Thymidine
Monophosphate, Adenosine Diphosphate And A Magnesium-Ion
gi|14488799|pdb|1E2G|A Chain A, Human Thymidylate Kinase Complexed With Adp, Tdp And A
Magnesium-Ion
gi|14488800|pdb|1E2Q|A Chain A, Human Thymidylate Kinase Complexed With Tp5a And A
Magnesium-Ion
gi|16975361|pdb|1E99|A Chain A, Human Thymidylate Kinase Complexed With Aztmp And Adp
gi|16975362|pdb|1E9A|A Chain A, Human Thymidylate Kinase Complexed With The Bisubstrate
Inhibitor Aztp5a
gi|16975363|pdb|1E9B|A Chain A, Human Thymidylate Kinase Complexed With Aztmp And Appnp
gi|29726714|pdb|1NMX|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Fltmp
And Adp
gi|29726716|pdb|1NMZ|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Nh2tmp
And Appnhp
gi|29726717|pdb|1NN0|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Ddtmp
And Adp
gi|29726718|pdb|1NN1|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Ddtmp
And Appnhp
gi|29726719|pdb|1NN3|A Chain A, Crystal Structure Of Human Thymidylate Kinase With D4tmp +
Adp
gi|29726720|pdb|1NN5|A Chain A, Crystal Structure Of Human Thymidylate Kinase With D4tmp +
Appnhp
Length = 215
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 125/220 (56%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 8 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 67
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 68 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 110
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 111 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL 170
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K I+ + ++ + D I + PL
Sbjct: 171 MKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPL 210
>gi|393221892|gb|EJD07376.1| thymidylate kinase [Fomitiporia mediterranea MF3/22]
Length = 222
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 122/202 (60%), Gaps = 25/202 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIV EG DRSGK+TQA L+ L ++NIP++ + FPDRT G +ID YLR + ++
Sbjct: 6 RGAFIVIEGLDRSGKSTQAASLLSRLQQSNIPTKLMKFPDRTTPIGKMIDAYLRSESDID 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+A HLLFSANRWE ++ + + +G + DRY+FSGVAFSA
Sbjct: 66 DRAIHLLFSANRWELVTSIERALNEGTII-----------------ICDRYAFSGVAFSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
+K G+ WC P+ GLP PD L ++ E ++R G+G+ERYE+ + QR+V E + +
Sbjct: 109 SK-GLPFDWCQAPDVGLPAPDLTLFLDISPEKARQRGGYGEERYEKEEMQRRVREVFSNI 167
Query: 187 KDN-------IWIDIDADKDID 201
+ W+ IDA K+++
Sbjct: 168 AADARRRDEYTWVTIDAGKELE 189
>gi|29726715|pdb|1NMY|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Fltmp
And Appnhp
Length = 209
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 125/220 (56%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 2 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 62 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 104
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 105 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL 164
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K I+ + ++ + D I + PL
Sbjct: 165 MKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPL 204
>gi|37206|emb|CAA38528.1| thymidylate kinase [Homo sapiens]
Length = 211
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 128/220 (58%), Gaps = 21/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L++ P + + FP+R+ G ++ YL+KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALSRGP-PPELLRFPERSTEIGKLLSSYLQKKSDVE 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 64 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 106
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 107 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL 166
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K ++ + ++ + D I+ + PL
Sbjct: 167 MKDTTLNWKMVDASKRLEAVHEELRVLSEDAIRTATEKPL 206
>gi|109101748|ref|XP_001094132.1| PREDICTED: thymidylate kinase-like isoform 2 [Macaca mulatta]
Length = 212
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 124/220 (56%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHAVHLLFSANRWEQVPLIKEKLSQGVTLIV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R +G ERYE FQ + + + +L
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAYGHERYENRAFQERALQCFHQL 167
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ W +DA K I+ + ++ + D I + PL
Sbjct: 168 MRDTTLNWKMVDASKSIEAVHEDIRVLSEDAIHTATEKPL 207
>gi|355565357|gb|EHH21846.1| hypothetical protein EGK_05000, partial [Macaca mulatta]
Length = 211
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 124/220 (56%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL KK ++
Sbjct: 4 RGALIVLEGVDRAGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSDVE 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 64 DHAVHLLFSANRWEQVPLIKEKLSQGVTLIV-----------------DRYAFSGVAFTG 106
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R +G ERYE FQ + + + +L
Sbjct: 107 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAYGHERYENRAFQERALQCFHQL 166
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ W +DA K I+ + ++ + D I + PL
Sbjct: 167 MRDTTLNWKMVDASKSIEAVHEDIRVLSEDAIHTATEKPL 206
>gi|16975313|pdb|1E9C|A Chain A, Mutant Human Thymidylate Kinase Complexed With Tmp And
Appnp
gi|16975314|pdb|1E9D|A Chain A, Mutant Human Thymidylate Kinase (F105y) Complexed With
Aztmp And Adp
gi|16975315|pdb|1E9E|A Chain A, Mutant Human Thymidylate Kinase (F105y) Complexed With
Dtmp And Adp
Length = 215
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 126/221 (57%), Gaps = 20/221 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 8 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 67
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVA++
Sbjct: 68 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAYTG 110
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 111 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL 170
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
KD W +DA K I+ + ++ + D I + PL+
Sbjct: 171 MKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPLK 211
>gi|131840166|ref|YP_001096175.1| unnamed protein product [Cyprinid herpesvirus 3]
gi|71068047|gb|AAZ23013.1| thymidylate kinase [Cyprinid herpesvirus 3]
gi|84181500|gb|ABC55103.1| hypothetical protein [Cyprinid herpesvirus 3]
gi|109706741|gb|ABG42967.1| thymidylate kinase [Cyprinid herpesvirus 3]
gi|129560659|dbj|BAF48954.1| deoxythymidylate kinase [Cyprinid herpesvirus 3]
Length = 233
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 115/195 (58%), Gaps = 20/195 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA I+ EG DRSGK+TQ + LV L + + ++ + FPDRT G +I+ YL K +L
Sbjct: 20 RGALIILEGVDRSGKSTQCRMLVKALLEMGVEAELMRFPDRTTPIGQMINSYLLNKSDLD 79
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE L + + +G T+ + DRY+FSGVAF+A
Sbjct: 80 DHVVHLLFSANRWEAASDLKRKLMKGTTIVL-----------------DRYAFSGVAFTA 122
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G ++ WC + + GLPKPD V+ + A++ R GFGDERYE + FQ V EN+E L
Sbjct: 123 AKPGFELEWCKRTDVGLPKPDLVVFLAIEASAVESRGGFGDERYEVSAFQAAVRENFEVL 182
Query: 187 KDNI---WIDIDADK 198
++ W +DA +
Sbjct: 183 MKDVTVNWRKVDAAR 197
>gi|330797527|ref|XP_003286811.1| hypothetical protein DICPUDRAFT_97517 [Dictyostelium purpureum]
gi|325083184|gb|EGC36643.1| hypothetical protein DICPUDRAFT_97517 [Dictyostelium purpureum]
Length = 219
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 133/221 (60%), Gaps = 20/221 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYL-NKNNIPSQFVNFPDRTISTGHIIDEYLRKKI 63
+ RG FI+FEG DR GK+TQ + L +++ N N+P++ + FPDRT G I+++YL+
Sbjct: 13 MKRGLFILFEGADRVGKSTQVQSLTNHISNSRNLPTKSLRFPDRTTPIGQILNQYLQNAT 72
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+ D+A HLLFS+NRWE + ++ +L+ G + + DRYS+SGVA
Sbjct: 73 NMDDRALHLLFSSNRWEAKDSILELLNSGTNIVV-----------------DRYSYSGVA 115
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
++AAK G+D+ WC+ EKGLP+PD V ++ E +R +G ERYE+ +FQ K+ + Y
Sbjct: 116 YTAAK-GIDVDWCYSCEKGLPEPDIVFYLSMSTEDATKRGDYGGERYEKVEFQMKIKQIY 174
Query: 184 -EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
EKLK W I+A++ ++ + + I ++ Q P+
Sbjct: 175 EEKLKRPSWKVINANRTVEEVSNEINQIFDSELESLQKKPI 215
>gi|62898429|dbj|BAD97154.1| deoxythymidylate kinase (thymidylate kinase) variant [Homo sapiens]
Length = 212
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 125/220 (56%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG R+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 5 RGALIVLEGVGRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL 167
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K I+ + ++ + D I+ + PL
Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPL 207
>gi|428184205|gb|EKX53061.1| hypothetical protein GUITHDRAFT_64796 [Guillardia theta CCMP2712]
Length = 212
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 128/222 (57%), Gaps = 20/222 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DRSGK+TQ +LV+ L + +NFPDRT + G +I+EYL+ +L
Sbjct: 4 RGALIVLEGLDRSGKSTQVIRLVEKLVSMGKKASKMNFPDRTTTVGGLINEYLQSGKDLD 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE ++ + G TL + DRY++SGVAFSA
Sbjct: 64 DAVIHLLFSANRWEATRSIRDRLSSGETLIV-----------------DRYAYSGVAFSA 106
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK +DI WC P++GLP PD V+ ++ + ++R G+G+ERYE+ +FQ+KV +E L
Sbjct: 107 AKGTLDIEWCKGPDRGLPAPDCVIYLDVSSDVAKQRGGYGEERYEKEEFQKKVRTCFEAL 166
Query: 187 KDN---IWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+W +DA+K +D + ++ I + + P+ S
Sbjct: 167 MSQEPAMWRRVDANKTMDEVTEEIEGIATKIVDQVTDKPIGS 208
>gi|402889934|ref|XP_003908252.1| PREDICTED: thymidylate kinase [Papio anubis]
Length = 233
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 125/220 (56%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL KK ++
Sbjct: 26 RGALIVLEGMDRAGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSDVE 85
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 86 DHAVHLLFSANRWEQVPLIKEKLSQGVTLIV-----------------DRYAFSGVAFTG 128
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN-YEK 185
AKE + WC QP+ GLPKPD +L +L +R +G ERYE FQ + + Y+
Sbjct: 129 AKENFSLDWCKQPDVGLPKPDLILFLQLQLADAAKRGAYGHERYENRAFQERALQCFYQL 188
Query: 186 LKDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
++D W +DA K I+ + + + D I+ + PL
Sbjct: 189 MRDTTLNWKMVDASKSIEAVHEDICALSEDAIRTATEKPL 228
>gi|395332035|gb|EJF64415.1| thymidylate kinase [Dichomitus squalens LYAD-421 SS1]
Length = 230
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 112/199 (56%), Gaps = 24/199 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIV EG DRSGK+TQ L + L +P + V FPDRT G +ID YLR E+
Sbjct: 7 RGAFIVVEGLDRSGKSTQVALLEERLKAEGVPVRLVKFPDRTTPIGKLIDSYLRSGSEMD 66
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+A HLLFSANRWE ++ +E G T+ DRY+FSG+AFSA
Sbjct: 67 DRAIHLLFSANRWELAKSMQDSLESGTTV-----------------VCDRYAFSGIAFSA 109
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK GM WC P+ LP PD L ++ E R GFG+ERYE++DFQ +V +E
Sbjct: 110 AKNAPGMSYEWCRGPDIALPAPDVTLFLAVSPEQQHTRGGFGEERYEKSDFQERVEHVFE 169
Query: 185 KLKDNI-----WIDIDADK 198
++ + W +DAD+
Sbjct: 170 RIGVEMGDGSRWFAVDADQ 188
>gi|149643009|ref|NP_001092363.1| thymidylate kinase [Bos taurus]
gi|148743918|gb|AAI42259.1| DTYMK protein [Bos taurus]
Length = 212
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 125/220 (56%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLVD L ++ + FP+R+ G ++ YL KK E+
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVDALCAEGHRAELLRFPERSTEIGKLLSSYLEKKSEVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE P + + + QG+TL + DRY+FSGVAF++
Sbjct: 65 DHSVHLLFSANRWEHVPLMKEKLSQGVTLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD V+ +L R FG ERY FQ++ + +++L
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDLVVFLQLQLAEAAARGEFGRERYGSGPFQQRALQRFQQL 167
Query: 187 KDN---IWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ W ++A + I+ + ++ + D I+ + PL
Sbjct: 168 LADPSLPWKMVNASRSIEDVHREIRALSEDAIRAAAHRPL 207
>gi|414590971|tpg|DAA41542.1| TPA: hypothetical protein ZEAMMB73_880960 [Zea mays]
Length = 229
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 109/190 (57%), Gaps = 18/190 (9%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
S+ RGA +V EG DRSGKT+Q +L+ +L ++ FPDR S G +I YL
Sbjct: 47 GSKGGRGALVVLEGLDRSGKTSQCARLLSFLKGKGYNAEGWRFPDRATSVGQMISSYLAN 106
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+L D+ HLLFSANRWE+ + + G TL + DRYS+SG
Sbjct: 107 DSQLDDRTIHLLFSANRWEKRALMESKLLSGTTLIV-----------------DRYSYSG 149
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
VAFSAAK G+DI WC PE GL PD V+ + E R G+G ERYE+ +FQ+KVAE
Sbjct: 150 VAFSAAK-GLDIEWCKAPENGLIAPDLVIYLDVQPEKAAERGGYGGERYEKIEFQKKVAE 208
Query: 182 NYEKLKDNIW 191
+Y L+D+ W
Sbjct: 209 HYHSLRDSTW 218
>gi|297669947|ref|XP_002813145.1| PREDICTED: thymidylate kinase isoform 1 [Pongo abelii]
Length = 212
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 124/220 (56%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R FG ERYE FQ + + +L
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENRAFQERALWCFHQL 167
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ W +DA K I+ + ++ + D I + PL
Sbjct: 168 MRDTTLNWKMVDASKSIEAVHEDIRMLSEDVICTATEKPL 207
>gi|389739204|gb|EIM80398.1| thymidylate kinase [Stereum hirsutum FP-91666 SS1]
Length = 237
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 120/219 (54%), Gaps = 32/219 (14%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MA++ RGAFIV EG DRSGK+TQA L++ L NIP +F FPDR G +ID YLR
Sbjct: 1 MATKPSRGAFIVIEGLDRSGKSTQAATLLERLQSRNIPVKFHKFPDRVTPIGQMIDSYLR 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
K +L D HLLFSANRWE T+ + + G + DRY+FS
Sbjct: 61 SKSDLDDHVIHLLFSANRWELAATVEQTLNSGTHI-----------------VCDRYAFS 103
Query: 121 GVAFSAAKEG-MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
G+AF+A+K + WC P+ LP PD +L ++ + R G+G+ERYEQ + Q +V
Sbjct: 104 GIAFTASKPSQIPFEWCRTPDISLPAPDLILYLDISPNKAKERGGYGEERYEQEEMQTRV 163
Query: 180 AENYEKLKDNI--------------WIDIDADKDIDTLG 204
E Y ++++ W++IDA + ++ +G
Sbjct: 164 REVYRRMREETMAVGSNRESENRPQWVEIDAGRSVEDVG 202
>gi|291415046|ref|XP_002723764.1| PREDICTED: thymidylate kinase isoform 1 [Oryctolagus cuniculus]
Length = 212
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 123/220 (55%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV L ++ + FP+R+ G ++ YL KK E+
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVAALRAAGHRAELLRFPERSTEIGKLLSSYLEKKSEVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF++
Sbjct: 65 DHSVHLLFSANRWEQVPFIKEKLSQGVTLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLP+PD VL +L R FG ERYE FQ + + + +L
Sbjct: 108 AKENFSLEWCKQPDVGLPRPDLVLFLQLKLAEAASRGEFGCERYESRAFQERALQGFHQL 167
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ W +DA K I+ + ++ + D I + PL
Sbjct: 168 MRDPSLNWKMVDASKSIEDVHEEIRALSEDAILSAAQRPL 207
>gi|326428009|gb|EGD73579.1| thymidylate kinase [Salpingoeca sp. ATCC 50818]
Length = 213
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 120/204 (58%), Gaps = 21/204 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG IV EG DR GK+TQ K LV+ L ++ + FP+R+ G +ID+YLRK+IEL
Sbjct: 4 RGVLIVLEGTDRCGKSTQCKLLVEKLASLGHEAKLMRFPERSTVIGGVIDKYLRKEIELD 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D AAHLLFSANRWE + + ++ G++L I DRY+FSGVAF++
Sbjct: 64 DHAAHLLFSANRWELVSQMKQALKSGVSLVI-----------------DRYAFSGVAFTS 106
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D+ WC P+ LP PD + +L+ +R GFG ERYE T+FQ KV YE L
Sbjct: 107 AK-GLDMDWCKSPDANLPSPDLHIHLELDPTEAAKRVGFGSERYEVTEFQAKVKAKYEDL 165
Query: 187 KDNIWIDIDADKDIDTLGLIVKDI 210
++ + ID GL ++D+
Sbjct: 166 YASM---TRPPRRIDVAGLSIEDV 186
>gi|431912281|gb|ELK14418.1| Thymidylate kinase [Pteropus alecto]
Length = 212
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 125/220 (56%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL KK E+
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALRAAGHCAELLRFPERSTEIGKLLSSYLEKKREVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF++
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLGQGVTLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD V+ +L R FG ERYE FQ +V + + +L
Sbjct: 108 AKENFHLDWCKQPDVGLPKPDLVVFLQLQLAVAAARGEFGRERYENRAFQERVLQRFHQL 167
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ W +DA + I+ + ++ + D I + PL
Sbjct: 168 MRDPALNWKVVDASRSIEDVHEEIRVLSEDIIWAATQQPL 207
>gi|358060041|dbj|GAA94100.1| hypothetical protein E5Q_00747 [Mixia osmundae IAM 14324]
Length = 212
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 123/211 (58%), Gaps = 24/211 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG F V EG DRSGK+TQ +LV++L + ++ + FPDRT G +ID YL + ++
Sbjct: 2 RGRFFVLEGLDRSGKSTQCARLVEHLQRQGRKAELLRFPDRTTPMGKMIDSYLTSQTDMN 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
DQA HLLFSANRWE+ ++ + + I + DRY+FSG+AFS
Sbjct: 62 DQAIHLLFSANRWEKAASIRQKLRDSIDI-----------------VCDRYAFSGIAFSV 104
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC P+ GLP PD VL ++ E ++R G+G ERYE+ + Q KV E + ++
Sbjct: 105 AK-GLDYQWCKAPDVGLPAPDQVLFLDISPEHAEQRGGYGQERYEKREMQLKVREVFGRI 163
Query: 187 KDNI------WIDIDADKDIDTLGLIVKDIV 211
+D++ W +DA + ++ + L ++ I
Sbjct: 164 RDDMTSAQGKWSVVDAGQSLEAVSLQIQHIA 194
>gi|449520785|ref|XP_004167413.1| PREDICTED: thymidylate kinase-like [Cucumis sativus]
Length = 260
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 119/213 (55%), Gaps = 19/213 (8%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
GA +V EG DR GKTTQA +L YL + FPDRT S G +I YL + +L D
Sbjct: 55 GALVVLEGLDRCGKTTQASRLAQYLEGLGHSVELWRFPDRTTSVGQMISSYLSNESQLDD 114
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
HLLFSANRWE+ + ++ G T+ + DRYS+SGVAFS A
Sbjct: 115 HTIHLLFSANRWEKRSLMETKLKGGTTIIL-----------------DRYSYSGVAFSCA 157
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLK 187
K G++ WC PE GL PD VL ++ + RKG+G ERYEQ +FQ +V E Y L
Sbjct: 158 K-GLNFEWCKAPEVGLLAPDLVLYLNISPKMAAERKGYGSERYEQIEFQNQVVEAYRDLM 216
Query: 188 -DNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
+ W +DA + ++ + +++IV+D +KK Q
Sbjct: 217 IGSNWQIVDACRPMEVIEKELQEIVLDCVKKCQ 249
>gi|348577653|ref|XP_003474598.1| PREDICTED: thymidylate kinase-like isoform 1 [Cavia porcellus]
Length = 212
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 117/198 (59%), Gaps = 20/198 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV L ++ + FPDR+ G ++ YL KK EL
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVSALCAAGHRAELLRFPDRSTEIGKLLSSYLEKKSELE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF++
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLYQGVTLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD +L +L R FG ERYE+ FQ + +++L
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDLILFLQLQLTDAATRGEFGHERYEEKTFQERALCGFQQL 167
Query: 187 -KDNI--WIDIDADKDID 201
+D+ W +DA + I+
Sbjct: 168 MRDSTLNWKVVDASRRIE 185
>gi|449468962|ref|XP_004152190.1| PREDICTED: thymidylate kinase-like [Cucumis sativus]
Length = 260
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 119/213 (55%), Gaps = 19/213 (8%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
GA +V EG DR GKTTQA +L YL + FPDRT S G +I YL + +L D
Sbjct: 55 GALVVLEGLDRCGKTTQASRLAQYLEGLGHSVELWRFPDRTTSVGQMISSYLSNESQLDD 114
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
HLLFSANRWE+ + ++ G T+ + DRYS+SGVAFS A
Sbjct: 115 HTIHLLFSANRWEKRSLMETKLKGGTTIIL-----------------DRYSYSGVAFSCA 157
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLK 187
K G++ WC PE GL PD VL ++ + RKG+G ERYEQ +FQ +V E Y L
Sbjct: 158 K-GLNFEWCKAPEVGLLAPDLVLYLNISPKMAAERKGYGSERYEQIEFQNQVVEAYRDLM 216
Query: 188 -DNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
+ W +DA + ++ + +++IV+D +KK Q
Sbjct: 217 IGSNWQIVDACQPMEVIEKELQEIVLDCVKKCQ 249
>gi|270011758|gb|EFA08206.1| hypothetical protein TcasGA2_TC005833 [Tribolium castaneum]
Length = 242
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 134/222 (60%), Gaps = 18/222 (8%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IV EG DRSGK+TQ +KLV+ L N+ + V FPDRT STG +ID+YL+++
Sbjct: 33 LKRGALIVVEGVDRSGKSTQCRKLVESLKARNVNAALVTFPDRTTSTGGLIDKYLKQETH 92
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L D+A HL+F+ANRWE++ + +L++QG+TL + DRYS+SG+ +
Sbjct: 93 LCDEAIHLMFTANRWEKKAEMERLLKQGVTLVV-----------------DRYSYSGIVY 135
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
S+ K+ M + WC +PE GL KPD VLL L+E + +R +G E YE + Q KVA+ +
Sbjct: 136 SSVKKNMSVKWCQEPENGLLKPDLVLLLVLSEAEMVKRPNYGSEIYENREMQEKVAQAFR 195
Query: 185 KLKDN-IWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
L + W + AD ++ + + D VI + + PL +
Sbjct: 196 DLSEREKWEVVSADGGVEDVHKELLDKVIKKVSQVGTQPLHT 237
>gi|321254063|ref|XP_003192951.1| thymidylate kinase [Cryptococcus gattii WM276]
gi|317459420|gb|ADV21164.1| thymidylate kinase, putative [Cryptococcus gattii WM276]
Length = 217
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 112/202 (55%), Gaps = 26/202 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIVFEG DR GK+TQ LV L + ++ FPDRT G +ID YL+ K E+
Sbjct: 6 RGAFIVFEGLDRCGKSTQVDHLVQRLERQGRRARLQKFPDRTTQIGKMIDAYLQSKTEID 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE + + + GIT+ DRY+FSG+AFSA
Sbjct: 66 DHAIHLLFSANRWECSAAIRRDLASGITV-----------------IADRYAFSGIAFSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+ +C QP+ GLP PDA L L E RR +G+ERYE Q+ V + ++ +
Sbjct: 109 AK-GLCFDFCLQPDAGLPLPDATLYLTLPPETAARRSAYGEERYESVSIQQAVRQQFKLV 167
Query: 187 KDNI--------WIDIDADKDI 200
+ I WI+IDAD I
Sbjct: 168 ANEIKKRHGADKWIEIDADGTI 189
>gi|405119073|gb|AFR93846.1| thymidylate kinase [Cryptococcus neoformans var. grubii H99]
Length = 217
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 122/220 (55%), Gaps = 26/220 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIVFEG DR GK+TQ +LV L ++ FPDRT G +ID YL+ K E+
Sbjct: 6 RGAFIVFEGLDRCGKSTQVDRLVQRLEHQGHRARLQKFPDRTTQIGKMIDAYLQSKTEID 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+A HLLFSANRWE T+ + + G+T+ DRY+FSG+AFS
Sbjct: 66 DRAIHLLFSANRWECSATIRRDLANGVTV-----------------IADRYAFSGIAFSV 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+ +C QP+ GLP PD L L+ EA +R +G+ERYE Q+ V + ++ +
Sbjct: 109 AK-GLPFDFCLQPDAGLPLPDVTLYLTLSPEAAAKRSAYGEERYESVSVQQAVRQQFKLV 167
Query: 187 KDNI--------WIDIDADKDIDTLGLIVKDIVIDTIKKS 218
D I WI+I+AD I+ + + + D ++ S
Sbjct: 168 ADEIKKRHGSDKWIEIEADGTIEDVEERIWSQISDVVEHS 207
>gi|452820201|gb|EME27247.1| dTMP kinase [Galdieria sulphuraria]
Length = 236
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 120/208 (57%), Gaps = 21/208 (10%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI 63
++ RGA IV EG D+SGKTTQ K ++ L + ++FPDRT STG +I +LR++
Sbjct: 26 KMSRGALIVLEGLDKSGKTTQIKSCLEILRADGFDVCQLSFPDRTTSTGQLISSFLREQT 85
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
L D+A HLLFSANRWE+ + + G ++ + DRY++SGVA
Sbjct: 86 MLDDRAVHLLFSANRWEKWKEMNDWLSNGTSILV-----------------DRYAYSGVA 128
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
++A+K G D+ WC P+KG PD V+ LQ R G+G+ERYE FQ +V+E +
Sbjct: 129 YTASK-GYDLDWCLGPDKGFIAPDLVVYLSAPSTVLQGRSGYGEERYENKAFQSRVSETF 187
Query: 184 EKLKDNIWIDIDADKDIDTLGLIVKDIV 211
KLK W+ + +D+ I+ I DI+
Sbjct: 188 GKLKTKKWLTVQSDRPIEE---ITHDII 212
>gi|50303763|ref|XP_451827.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640959|emb|CAH02220.1| KLLA0B06556p [Kluyveromyces lactis]
Length = 208
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 137/221 (61%), Gaps = 29/221 (13%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK-I 63
+ RG I+ EG DR+GK+TQ + +V+ L + + + FPDRT G +I++YL K
Sbjct: 1 MVRGKLILIEGLDRTGKSTQCENVVNALGNDAV---LIKFPDRTTKIGQLINQYLTDKDF 57
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
ELP Q+ HLLFSANRWE + E +HS L+ K++ DRY +SGVA
Sbjct: 58 ELPAQSIHLLFSANRWELK-------------EEIHSMLKAGKHV----VLDRYVYSGVA 100
Query: 124 FSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
+SAAK +GMDISWCF P+KGL KPD L F N ++ R+GFG+ERYE+ +FQR+V +
Sbjct: 101 YSAAKGIQGMDISWCFNPDKGLLKPDLTLFFS-NSSNMRDREGFGEERYEKVEFQRQVRD 159
Query: 182 N----YEKLKDNIWIDID-ADKDIDTLGLIVKDIVIDTIKK 217
++++KD+ I ID +DK ID + +K ++ D I K
Sbjct: 160 TFFNVFDQIKDSNRIVIDVSDKSIDEVFSEIKPLIHDVINK 200
>gi|336366715|gb|EGN95061.1| hypothetical protein SERLA73DRAFT_187350 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379395|gb|EGO20550.1| hypothetical protein SERLADRAFT_399491 [Serpula lacrymans var.
lacrymans S7.9]
Length = 225
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 113/198 (57%), Gaps = 24/198 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
R FIV EG DRSGK+TQA L D+L +P + FPDR + G +ID YLR + +L
Sbjct: 4 RAPFIVVEGLDRSGKSTQASILCDHLTSLGLPVELFKFPDRRTAIGKMIDSYLRSESDLD 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+A HLLFSANRWE T++ +E+G T+ DRY+FSG+AFSA
Sbjct: 64 DRAIHLLFSANRWELASTISSHLEKGTTI-----------------IADRYAFSGIAFSA 106
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
K G+ WC P+ GLP PD + + + Q R G+G ERYEQ + QR V + +E++
Sbjct: 107 RK-GLSYKWCQAPDVGLPAPDLTMFLDIEPDIAQARGGYGTERYEQEEVQRDVRQVFERI 165
Query: 187 KDNI------WIDIDADK 198
+ + W+ IDA +
Sbjct: 166 EKEMTHAGARWVKIDAGR 183
>gi|157817466|ref|NP_001100395.1| thymidylate kinase [Rattus norvegicus]
gi|149037469|gb|EDL91900.1| deoxythymidylate kinase (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 212
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 129/227 (56%), Gaps = 22/227 (9%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MAS+ RGA IV EG DR+GKTTQ +LV L + ++ + FP+R+ G ++ YL
Sbjct: 1 MASR--RGALIVLEGVDRAGKTTQCLRLVTALCASGHRAELLRFPERSTEIGKLLSSYLE 58
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
KK EL D + HLLFSANRWE+ P + + QG+TL + DRY+FS
Sbjct: 59 KKTELEDHSVHLLFSANRWEQVPLIKAKLNQGVTLVL-----------------DRYAFS 101
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GVAF++AKE + WC QP+ GLPKPD +L +L R FG ERYE FQ +V
Sbjct: 102 GVAFTSAKENFSLDWCKQPDVGLPKPDLILFLQLQLLDAASRGEFGLERYETGTFQEQVL 161
Query: 181 ENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
+++L K+ W +DA K I+ + ++ + D I+ + PLE
Sbjct: 162 LCFQQLMSEKNLNWKVVDASKSIEDVHEEIRALSEDAIQNAAQRPLE 208
>gi|409075363|gb|EKM75744.1| hypothetical protein AGABI1DRAFT_79501 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 240
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 113/219 (51%), Gaps = 38/219 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
R FIV EG DRSGKTTQA L L NIP++ + FPDRT G +ID YLR + EL
Sbjct: 11 RAPFIVIEGLDRSGKTTQASLLHSKLQSLNIPTKLLKFPDRTTPIGQMIDSYLRSQSELD 70
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE T+T L+ G T+ DRY+FSG+AFSA
Sbjct: 71 DHVIHLLFSANRWELASTITDLLHSGTTI-----------------LCDRYAFSGIAFSA 113
Query: 127 AKEGM------DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
+K + + WC P+ LP PD + + QRR G+G+ERYE+ D Q +V
Sbjct: 114 SKPSLIQQDLAALEWCRAPDISLPAPDLTIFLDFSPAEAQRRSGYGEERYEKIDVQSRVR 173
Query: 181 ENYEKLKDNI---------------WIDIDADKDIDTLG 204
E + +L + W+ +DA KD + +
Sbjct: 174 EIFHRLGQEMVHNDNDNHRRDSSQEWVVVDASKDREVIA 212
>gi|320582782|gb|EFW96999.1| Thymidylate and uridylate kinase [Ogataea parapolymorpha DL-1]
Length = 210
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 122/206 (59%), Gaps = 21/206 (10%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR-KKI 63
+ RG I EG DR+GKTTQ +L++ L+K+ + + + FP+RT G II+ YL K
Sbjct: 1 MTRGVLIAIEGLDRTGKTTQTSRLLERLDKSGVDATLIKFPERTTPIGRIINTYLTDKAF 60
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
EL DQ+AHLLFSANRWE + L+E G T+ + DRY +SGVA
Sbjct: 61 ELSDQSAHLLFSANRWELAEKIRNLLEDGKTVVL-----------------DRYVYSGVA 103
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
+S+AK G+ WC P+ GLPKPD VL K E R+GFG+ERYE +FQ++V +
Sbjct: 104 YSSAK-GLPFDWCLSPDLGLPKPDIVLFMKFKHEDNVTREGFGEERYEVAEFQQRVKTQF 162
Query: 184 EKLK-DNIWIDIDAD-KDIDTLGLIV 207
EK + ++ W I D K I+ +G ++
Sbjct: 163 EKFQNEDNWKTIYVDNKSIEEVGELI 188
>gi|426198013|gb|EKV47939.1| hypothetical protein AGABI2DRAFT_219178 [Agaricus bisporus var.
bisporus H97]
Length = 240
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 113/219 (51%), Gaps = 38/219 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
R FIV EG DRSGKTTQA L L NIP++ + FPDRT G +ID YLR + EL
Sbjct: 11 RAPFIVIEGLDRSGKTTQAALLHSKLQSLNIPTKLLKFPDRTTPIGQMIDSYLRSQSELD 70
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE T+T L+ G T+ DRY+FSG+AFSA
Sbjct: 71 DHVIHLLFSANRWELASTITDLLHSGTTI-----------------LCDRYAFSGIAFSA 113
Query: 127 AKEGM------DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
+K + + WC P+ LP PD + + QRR G+G+ERYE+ D Q +V
Sbjct: 114 SKPSLIQQDLAALEWCRAPDISLPAPDLTIFLDFSPAEAQRRSGYGEERYEKIDVQNRVR 173
Query: 181 ENYEKLKDNI---------------WIDIDADKDIDTLG 204
E + +L + W+ +DA KD + +
Sbjct: 174 EIFHRLGQEMVHNDNDNHRRDSSQEWVVVDASKDREVIA 212
>gi|449297760|gb|EMC93777.1| hypothetical protein BAUCODRAFT_210361 [Baudoinia compniacensis
UAMH 10762]
Length = 219
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 125/219 (57%), Gaps = 24/219 (10%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
PRG IVFEG DRSGK+TQ ++LV +L + +Q + FP+RT G +I+ YL +
Sbjct: 4 PRGTLIVFEGLDRSGKSTQCERLVSHLRQEGHDAQHMRFPNRTTPIGQMINNYLSGLAQT 63
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D HLLFSANRWE + +LI +G T+ I DRY +SG+A++
Sbjct: 64 EDHVIHLLFSANRWESAAEIERLISEGTTVVI-----------------DRYYYSGMAYT 106
Query: 126 AAKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
AAK MD++WC PE GLP+PD L ++ E R G+G ERYE+ + Q +V E +
Sbjct: 107 AAKGNPDMDLNWCRHPEVGLPRPDLCLFLDVSTEVAMSRGGYGAERYEKREMQDRVRELF 166
Query: 184 EKLKDNI-----WIDIDADKDIDTLGLIVKDIVIDTIKK 217
++D+ + +DA++ I+ + + D+V T+++
Sbjct: 167 RDMRDHHDERSDIVLVDANRSIEDVAAEINDLVGLTMQQ 205
>gi|355750994|gb|EHH55321.1| hypothetical protein EGM_04505 [Macaca fascicularis]
Length = 212
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 120/220 (54%), Gaps = 20/220 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L F +R+ G ++ YL KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVETLXXXXXXXXXXXFLERSTEIGKLLSSYLEKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHAVHLLFSANRWEQVPLIKEKLSQGVTLIV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE + WC QP+ GLPKPD VL +L +R +G ERYE FQ + + + +L
Sbjct: 108 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAYGHERYENRAFQERALQCFHQL 167
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ W +DA K I+ + ++ + D I + PL
Sbjct: 168 MRDATLNWKMVDASKSIEAVHEDIRVLSEDAIHTATEKPL 207
>gi|157785665|ref|NP_001099137.1| thymidylate kinase isoform 1 [Mus musculus]
gi|193806346|sp|P97930.2|KTHY_MOUSE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|20987342|gb|AAH30178.1| Dtymk protein [Mus musculus]
gi|148707983|gb|EDL39930.1| deoxythymidylate kinase, isoform CRA_a [Mus musculus]
Length = 212
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 128/226 (56%), Gaps = 22/226 (9%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MAS+ RGA IV EG DR+GKTTQ KLV L + ++ + FP+R+ G +++ YL
Sbjct: 1 MASR--RGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLE 58
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
KK EL D + HLLFSANRWE+ P + + QG+TL + DRY+FS
Sbjct: 59 KKTELEDHSVHLLFSANRWEQVPLIKAKLNQGVTLVL-----------------DRYAFS 101
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GVAF+ AKE + WC QP+ GLPKPD +L +L R FG ERYE FQ++V
Sbjct: 102 GVAFTGAKENFSLDWCKQPDVGLPKPDLILFLQLQLLDAAARGEFGLERYETGTFQKQVL 161
Query: 181 ENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+++L K+ W +DA K I+ + ++ D I+ + PL
Sbjct: 162 LCFQQLMEEKNLNWKVVDASKSIEEVHKEIRAHSEDAIRNAAQRPL 207
>gi|157116912|ref|XP_001652905.1| Thymidylate kinase, putative [Aedes aegypti]
gi|108883433|gb|EAT47658.1| AAEL001246-PB [Aedes aegypti]
Length = 181
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 114/186 (61%), Gaps = 19/186 (10%)
Query: 39 SQFVNFPDRTISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIM 98
++F+NFPDR+ G +I+ YL K D+A HLLF+ NRWE + + +L+ G+TL +
Sbjct: 10 AKFMNFPDRSTQFGALINSYLTSKDNFTDEAIHLLFTLNRWEAKNEMERLLRSGVTLIV- 68
Query: 99 HSSLENEKNLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEA 158
DRYS+SGVAFSAAK G+++ WC PE GLPKPD VLL L EA
Sbjct: 69 ----------------DRYSYSGVAFSAAK-GLNMDWCKAPETGLPKPDLVLLLTLTAEA 111
Query: 159 LQRRKGFGDERYEQTDFQRKVAENYEKLKDN-IWIDIDADKDIDTLGLIVKDIVIDTIKK 217
+ +R GFG ERYE + Q+KV E + LKD+ W +DADK D L L + ++V+D+++
Sbjct: 112 MAKRGGFGQERYEVPELQKKVMEKFHTLKDDSYWKVVDADKKEDALSLELCEMVLDSMES 171
Query: 218 SQFSPL 223
PL
Sbjct: 172 CSDKPL 177
>gi|19076042|ref|NP_588542.1| thymidylate kinase Tmp1 [Schizosaccharomyces pombe 972h-]
gi|14286144|sp|P36590.2|KTHY_SCHPO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|3192027|emb|CAA19357.1| thymidylate kinase Tmp1 [Schizosaccharomyces pombe]
Length = 210
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 123/211 (58%), Gaps = 24/211 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG IV EG DRSGK+TQ + LVD L + ++ FPDRT + G ID+YL++ ++L
Sbjct: 6 RGRLIVIEGLDRSGKSTQCQLLVDKLISQHEKAELFKFPDRTTAIGKKIDDYLKESVQLN 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
DQ HLLFSANRWE + + I +G+T C DRY+FSG+AFSA
Sbjct: 66 DQVIHLLFSANRWETIQYIYEQINKGVT-----------------CILDRYAFSGIAFSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC P++GLP+PD V+ ++ R +G+ERYE+ + Q KV +N+++L
Sbjct: 109 AK-GLDWEWCKSPDRGLPRPDLVIFLNVDPRIAATRGQYGEERYEKIEMQEKVLKNFQRL 167
Query: 187 KDNI------WIDIDADKDIDTLGLIVKDIV 211
+ +I +DA ++ + + D+V
Sbjct: 168 QKEFREEGLEFITLDASSSLEDVHSQIVDLV 198
>gi|326480672|gb|EGE04682.1| thymidylate kinase [Trichophyton equinum CBS 127.97]
Length = 235
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 132/227 (58%), Gaps = 28/227 (12%)
Query: 1 MASQIP---RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDE 57
+ S+IP RGA +V EG DR+GK+TQ +L +L ++++ FPDRT + G +I++
Sbjct: 3 LESEIPASRRGALVVVEGLDRAGKSTQCARLHQFLVNQGHETKYIRFPDRTTAIGKMINQ 62
Query: 58 YLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
YLR +I+L D A HLLFSANRWE + + IE GIT+ + DRY
Sbjct: 63 YLRGEIQLDDHAVHLLFSANRWEAAAQIRRDIESGITVIV-----------------DRY 105
Query: 118 SFSGVAFSAAKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDF 175
S+SG +SAAKE + + W ++PE GLP+PD ++ E R G+G ERYE +
Sbjct: 106 SYSGAVYSAAKENKELQLDWAWRPEVGLPRPDIWFFLNISTEVAAARGGYGTERYETVNL 165
Query: 176 QRKVAENYEKL-----KDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
Q+KV + + L +++ + +DA ++ID + +++ V+ T+ K
Sbjct: 166 QKKVGKLFLSLTGLKGNEDMRV-VDAGREIDEISREIQEEVLQTMAK 211
>gi|328773773|gb|EGF83810.1| hypothetical protein BATDEDRAFT_8037 [Batrachochytrium
dendrobatidis JAM81]
Length = 181
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 107/185 (57%), Gaps = 18/185 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR GKT+Q LV +L FPDRT+ TG +ID+YLR E+
Sbjct: 12 RGALIVVEGGDRCGKTSQCSVLVSHLCAAGFNVMAHKFPDRTLDTGVLIDQYLRGTKEVD 71
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE + LI+QGIT+ + DRY+FSG A++A
Sbjct: 72 DHAIHLLFSANRWESMGHIKSLIDQGITIVV-----------------DRYAFSGAAYTA 114
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D+ WC +P+ GL KPD VL L+ + R +G ERYE +FQ V N+ ++
Sbjct: 115 AK-GIDLEWCKRPDMGLLKPDLVLYLDLDPKIAAARAEYGSERYETIEFQAAVRRNFYQI 173
Query: 187 KDNIW 191
D+ W
Sbjct: 174 ADDSW 178
>gi|327301613|ref|XP_003235499.1| thymidylate kinase [Trichophyton rubrum CBS 118892]
gi|326462851|gb|EGD88304.1| thymidylate kinase [Trichophyton rubrum CBS 118892]
Length = 235
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 132/227 (58%), Gaps = 28/227 (12%)
Query: 1 MASQIP---RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDE 57
+ S+IP RGA +V EG DR+GK+TQ +L +L ++++ FPDRT S G +I++
Sbjct: 3 LESEIPASRRGALVVVEGLDRAGKSTQCARLHQFLVDQGHKTKYIRFPDRTTSIGKMINQ 62
Query: 58 YLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
YLR +I+L D A HL+FSANRWE + + IE GIT+ + DRY
Sbjct: 63 YLRGEIQLDDHAVHLVFSANRWEAAAQIQRDIESGITVIV-----------------DRY 105
Query: 118 SFSGVAFSAAKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDF 175
S+SG +SAAKE + + W ++PE GLP+PD ++ E R G+G ERYE +
Sbjct: 106 SYSGAVYSAAKENKELQLDWAWRPEVGLPRPDIWFFLNVSTEVAAARGGYGTERYETVNL 165
Query: 176 QRKVAENYEKL-----KDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
Q+KV + + L +++ I +DA +++D + +++ V+ T+ K
Sbjct: 166 QKKVGKLFLSLTGLKGNEDMRI-VDAGREVDEISHEIREEVLQTMAK 211
>gi|432853379|ref|XP_004067678.1| PREDICTED: thymidylate kinase-like isoform 2 [Oryzias latipes]
Length = 151
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 106/174 (60%), Gaps = 26/174 (14%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MA Q RGA IV EG DR+GKTTQ K LV L K+ P++ + FPDRT + G +I YL
Sbjct: 1 MACQ--RGALIVLEGVDRAGKTTQCKMLVQALQKSGRPAEAMRFPDRTTTIGQLISAYLE 58
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
KK EL D HLLFSANRWE PT+ K +EQGITL + DRY+FS
Sbjct: 59 KKSELEDHTVHLLFSANRWELVPTMKKKLEQGITLVV-----------------DRYAFS 101
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLN--EEALQRRKGFGDERYEQ 172
G AF++AK G + WC +P+ GLPKPD V+ +L+ E AL+ GD +E+
Sbjct: 102 GAAFTSAKPGFSLEWCMKPDVGLPKPDLVMFLQLSPAEAALR-----GDRCFEE 150
>gi|452982252|gb|EME82011.1| hypothetical protein MYCFIDRAFT_77678 [Pseudocercospora fijiensis
CIRAD86]
Length = 227
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 124/231 (53%), Gaps = 27/231 (11%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
+S+IPRG IVFEG DRSGK+TQ +L +L FPDRT S G +I+ YL
Sbjct: 9 SSEIPRGHLIVFEGLDRSGKSTQCARLAQHLQSRAHKVHAHRFPDRTTSIGQMINSYLSG 68
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
D A HLLFSANRWE + +LI G T+ I DRY +SG
Sbjct: 69 SSSQEDHAIHLLFSANRWEAAERIKELINSGTTVVI-----------------DRYYYSG 111
Query: 122 VAFSAAKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
+SAAK+ MD++WC E GLP+PD L ++ E +R GFG ERYE+ + Q +V
Sbjct: 112 CVYSAAKQNPTMDLAWCRHMEVGLPRPDLCLFLDISTELAAKRGGFGTERYEKQEMQDRV 171
Query: 180 AE------NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTI-KKSQFSPL 223
E +E K++I + IDA ++ + +++ V + + KSQ PL
Sbjct: 172 RELFREMQTHEDEKEDI-VRIDAGASMEEVEKMIQKTVQEKLGSKSQLGPL 221
>gi|315049351|ref|XP_003174050.1| thymidylate kinase [Arthroderma gypseum CBS 118893]
gi|311342017|gb|EFR01220.1| thymidylate kinase [Arthroderma gypseum CBS 118893]
Length = 237
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 126/217 (58%), Gaps = 23/217 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA +V EG DR+GK+TQ +L +L ++++ FPDRT S G +I++YLR +I+L
Sbjct: 14 RGALVVVEGLDRAGKSTQCTRLHQFLVDQGHKAKYIRFPDRTTSIGKMINQYLRAEIQLD 73
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE + + IE GIT+ + DRYS+SG +SA
Sbjct: 74 DHAVHLLFSANRWEAAAQIRQDIEAGITVIV-----------------DRYSYSGAVYSA 116
Query: 127 AKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE--- 181
AKE + + W ++PE GLP+PD ++ E R G+G ERYE + Q++V +
Sbjct: 117 AKENKELQLDWAWRPEVGLPRPDIWFFLNISTEVAAARGGYGTERYETVNLQQRVGKLFL 176
Query: 182 NYEKLKDNIWIDI-DADKDIDTLGLIVKDIVIDTIKK 217
+ LK N + I DA +++D + ++D V+ T+ K
Sbjct: 177 SLSGLKGNEDMRIVDAGREMDEISSDIRDEVLQTMTK 213
>gi|16975316|pdb|1E9F|A Chain A, Mutant Human Thymidylate Kinase Complexed With Tmp And Adp
Length = 217
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 127/222 (57%), Gaps = 22/222 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG D +GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 8 RGALIVLEGVDGAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 67
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 68 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 110
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGD-ERYEQTDFQRKVAENYE 184
AKE + WC QP+ GLPKPD VL +L +A +R + G+ ERYE FQ + +
Sbjct: 111 AKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGRARGELERYENGAFQERALRCFH 170
Query: 185 KL-KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+L KD W +DA K I+ + ++ + D I + PL
Sbjct: 171 QLMKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPL 212
>gi|294979332|pdb|2WWF|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
Tmp And Adp
gi|294979333|pdb|2WWF|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
Tmp And Adp
gi|294979334|pdb|2WWF|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
Tmp And Adp
gi|294979335|pdb|2WWG|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
Dgmp And Adp
gi|294979336|pdb|2WWG|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
Dgmp And Adp
gi|294979337|pdb|2WWG|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
Dgmp And Adp
gi|294979338|pdb|2WWH|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
Ap5dt
gi|294979339|pdb|2WWH|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
Ap5dt
gi|294979340|pdb|2WWH|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
Ap5dt
gi|294979341|pdb|2WWI|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
Aztmp And Adp
gi|294979342|pdb|2WWI|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
Aztmp And Adp
gi|294979343|pdb|2WWI|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
Aztmp And Adp
Length = 212
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 128/227 (56%), Gaps = 19/227 (8%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M +G FIVFEG DRSGK+TQ+K LV+YL NN+ + + FP+R G II +YL+
Sbjct: 3 MTDDKKKGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLK 62
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ + ++ HLLFSANRWE + L+ +GI + DRY++S
Sbjct: 63 MENSMSNETIHLLFSANRWEHMNEIKSLLLKGIWV-----------------VCDRYAYS 105
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GVA+S+ ++ +WC P++GL KPD V + Q R +G+E YE+ + Q+K+
Sbjct: 106 GVAYSSGALNLNKTWCMNPDQGLIKPDVVFYLNVPPNYAQNRSDYGEEIYEKVETQKKIY 165
Query: 181 ENYEKL-KDNIWIDIDADKDI-DTLGLIVKDIVIDTIKKSQFSPLES 225
E Y+ ++ WI+IDA + I D IVK++ ++ +F+ L S
Sbjct: 166 ETYKHFAHEDYWINIDATRKIEDIHNDIVKEVTKIKVEPEEFNFLWS 212
>gi|124807055|ref|XP_001350897.1| thymidylate kinase, putative [Plasmodium falciparum 3D7]
gi|23497027|gb|AAN36577.1|AE014852_21 thymidylate kinase, putative [Plasmodium falciparum 3D7]
Length = 210
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 128/227 (56%), Gaps = 19/227 (8%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M +G FIVFEG DRSGK+TQ+K LV+YL NN+ + + FP+R G II +YL+
Sbjct: 1 MTDDKKKGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLK 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ + ++ HLLFSANRWE + L+ +GI + DRY++S
Sbjct: 61 MENSMSNETIHLLFSANRWEHMNEIKSLLLKGIWV-----------------VCDRYAYS 103
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GVA+S+ ++ +WC P++GL KPD V + Q R +G+E YE+ + Q+K+
Sbjct: 104 GVAYSSGALNLNKTWCMNPDQGLIKPDVVFYLNVPPNYAQNRSDYGEEIYEKVETQKKIY 163
Query: 181 ENYEKL-KDNIWIDIDADKDI-DTLGLIVKDIVIDTIKKSQFSPLES 225
E Y+ ++ WI+IDA + I D IVK++ ++ +F+ L S
Sbjct: 164 ETYKHFAHEDYWINIDATRKIEDIHNDIVKEVTKIKVEPEEFNFLWS 210
>gi|453083655|gb|EMF11700.1| thymidylate kinase [Mycosphaerella populorum SO2202]
Length = 227
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 122/216 (56%), Gaps = 26/216 (12%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
PRG IVFEG DRSGK+TQ +LVD+L N + + FP+R+ G +I+ YL
Sbjct: 12 PRGRLIVFEGLDRSGKSTQCARLVDHLTARNQKVKHMRFPNRSTVIGQMINNYLVGSSNQ 71
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D A HLLFSANRWE + + ++ G T+ I DRY +SG +S
Sbjct: 72 EDHAIHLLFSANRWEAADEIQQHVQAGTTVVI-----------------DRYYYSGCVYS 114
Query: 126 AAKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
AAK+ MD++WC PE GLP+PD L ++ E +R GFG ERYE+ + Q +V +
Sbjct: 115 AAKQNPTMDLAWCRHPEVGLPRPDLCLFLDISAEDAAQRGGFGSERYEKQEMQDRVRSLF 174
Query: 184 EKLK------DNIWIDIDADKDIDTLGLIVKDIVID 213
++++ D+I + +DA K +D + I++ IV D
Sbjct: 175 KEMRTHPDEADDIVV-VDAGKSVDEVAKIIERIVDD 209
>gi|3493131|gb|AAC33288.1| thymidylate kinase, partial [Arabidopsis thaliana]
Length = 188
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 108/180 (60%), Gaps = 18/180 (10%)
Query: 14 EGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQAAHLL 73
+G DRSGK+TQ KL+ +LN P++ FPDR S G +I YL K +L D HLL
Sbjct: 1 KGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNKSQLDDHTIHLL 60
Query: 74 FSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKEGMDI 133
FSANRWE+ + + ++ G TL + DRYS+SGVAFS+AK G+DI
Sbjct: 61 FSANRWEKRSLMEEKLKTGTTLIV-----------------DRYSYSGVAFSSAK-GLDI 102
Query: 134 SWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKDNIWID 193
WC PE GL PD+VL ++ E R G+GDERYE+ +FQ+KVA+ Y+ L D+ D
Sbjct: 103 EWCKAPEIGLLAPDSVLYLDISPERAAERGGYGDERYERVEFQKKVADFYQTLGDSFMED 162
>gi|302851470|ref|XP_002957259.1| hypothetical protein VOLCADRAFT_107597 [Volvox carteri f.
nagariensis]
gi|300257509|gb|EFJ41757.1| hypothetical protein VOLCADRAFT_107597 [Volvox carteri f.
nagariensis]
Length = 546
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 119/218 (54%), Gaps = 19/218 (8%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
Q RGA IVFEG DR GKTTQ +KLV+ L + + FPDR+ S G I+ YL ++
Sbjct: 8 GQSSRGALIVFEGGDRCGKTTQCRKLVERLRSQGVDAVMWRFPDRSTSIGQAINAYLVEQ 67
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+ D AHLLF+ANR E+ + +L+ TL + DRYS+SGV
Sbjct: 68 SHMDDAVAHLLFAANRMEKREEMLRLLSGRTTLVV-----------------DRYSYSGV 110
Query: 123 AFSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
A++AAK + + +C E GLP D V+ + EA R G+G ERYE+ DFQ+KV
Sbjct: 111 AYTAAKGVPHLSMDYCRAVEVGLPAADLVIFMDMTAEATAARGGYGQERYEKVDFQQKVM 170
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKS 218
+ +E L+D W IDA ID + V + ++++
Sbjct: 171 KAFEALRDERWAVIDASGTIDDIHQKVAAVAEPVVQRA 208
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 111/249 (44%), Gaps = 68/249 (27%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIVFEG DR GK+TQ+ LVD+L + + + FPDR+ G I++YL +
Sbjct: 271 RGAFIVFEGIDRCGKSTQSNLLVDHLRRRGVKVEHWCFPDRSTRIGQTINDYLHNGADHD 330
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLF+ANR+E+ +SGVA++A
Sbjct: 331 DTAIHLLFTANRFEKR------------------------------------YSGVAYTA 354
Query: 127 AK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRK------ 178
AK + + +C E GLP D V+ + E R GFG ERYE+ +FQRK
Sbjct: 355 AKGVPHLSMDYCRAVEVGLPAADLVIFMDMTAEEAAARGGFGAERYEKLEFQRKASLGIV 414
Query: 179 ------------------------VAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDT 214
VA+ Y LKD+ W+ +DA + + L V D V+
Sbjct: 415 TGAWRRLVVTPAILMPLSCRPTKQVAQQYAALKDSHWLRLDATQQPECLQQQVVDAVLPV 474
Query: 215 IKKSQFSPL 223
++ + L
Sbjct: 475 VEGAARGAL 483
>gi|26353426|dbj|BAC40343.1| unnamed protein product [Mus musculus]
Length = 212
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 127/226 (56%), Gaps = 22/226 (9%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MAS+ RGA IV EG DR+GKTTQ KLV L + ++ + FP+R+ G +++ YL
Sbjct: 1 MASR--RGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLE 58
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
KK EL D + HLLFSANRWE+ P + + QG+TL + DRY+FS
Sbjct: 59 KKTELEDHSVHLLFSANRWEQVPLIKAKLNQGVTLVL-----------------DRYAFS 101
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GVAF+ AKE + WC QP+ GLPKPD +L +L R FG ER E FQ++V
Sbjct: 102 GVAFTGAKENFSLDWCKQPDVGLPKPDLILFLQLQLLDAAARGEFGLERNETGTFQKQVL 161
Query: 181 ENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+++L K+ W +DA K I+ + ++ D I+ + PL
Sbjct: 162 LCFQQLMEEKNLNWKVVDASKSIEEVHKEIRAHSEDAIRNAAQRPL 207
>gi|363750532|ref|XP_003645483.1| hypothetical protein Ecym_3163 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889117|gb|AET38666.1| Hypothetical protein Ecym_3163 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 133/226 (58%), Gaps = 28/226 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKIEL 65
RG I+ EG DR+GK+TQA L+ L N +Q + FPDRT G +ID+YL ++ EL
Sbjct: 3 RGRLILIEGLDRTGKSTQATLLLQRLQPN---AQLIKFPDRTTPIGMLIDKYLTQETFEL 59
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
PDQAAHLLFSANRWE + +L+ G + + DRY +SG+A+S
Sbjct: 60 PDQAAHLLFSANRWELGARIKELLLIGTHVIL-----------------DRYVYSGIAYS 102
Query: 126 AAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEA---LQRRKGFGDERYEQTDFQRKVA 180
AAK GMD++WCFQP+KGL KPD + F +E+ L+ R G+G+ERYE+ +FQR V
Sbjct: 103 AAKNIPGMDLAWCFQPDKGLVKPDLTIFFLHDEKHGHELENRSGYGNERYERVEFQRAVL 162
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLESN 226
++ + + + +K + TL + K ID++ ++ +E +
Sbjct: 163 AQFQDMFEQLEHSGYREKHLVTLQVSGKS--IDSVANDVWNAVERH 206
>gi|134109297|ref|XP_776763.1| hypothetical protein CNBC2540 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259443|gb|EAL22116.1| hypothetical protein CNBC2540 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 217
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 110/199 (55%), Gaps = 26/199 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIVFEG DR GK+TQ +LV L + ++ FPDRT G +ID YL+ K E+
Sbjct: 6 RGAFIVFEGLDRCGKSTQVDRLVQRLERQGHRARLQKFPDRTTQIGKMIDAYLQSKTEID 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE + + + GIT+ DRY+FSG+AFSA
Sbjct: 66 DHAIHLLFSANRWECSAAIRRDLANGITV-----------------IADRYAFSGIAFSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+ +C P+ GLP PD L L E +R +G+ERYE Q+ V + ++ +
Sbjct: 109 AK-GLPFDFCLHPDAGLPLPDVTLYLTLPPETAAKRSAYGEERYESVSIQQAVRQQFKLV 167
Query: 187 KDNI--------WIDIDAD 197
+ I WI+I+AD
Sbjct: 168 ANEIKNRHGSDKWIEIEAD 186
>gi|118351574|ref|XP_001009062.1| thymidylate kinase family protein [Tetrahymena thermophila]
gi|89290829|gb|EAR88817.1| thymidylate kinase family protein [Tetrahymena thermophila SB210]
Length = 211
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 126/219 (57%), Gaps = 24/219 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FIVFEG DR GKT+Q + LV++L ++ + +PDRT + G I+ YL+ K L
Sbjct: 4 RGLFIVFEGLDRCGKTSQCENLVNFLKESGKKAIMKRYPDRTTTIGQTINNYLQGKQNLS 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
DQA HL+FSANRWE++ + K++++G + DRY +SG +++
Sbjct: 64 DQAIHLIFSANRWEQQEEIKKILDEGTNI-----------------VCDRYCYSGAVYTS 106
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G DI WC P+KGL KPD VL +E + +R GFG E YE+ +FQ+KV E ++ L
Sbjct: 107 AK-GYDIEWCKNPDKGLIKPDIVLYLHAPKEVISKRSGFGGEVYEKEEFQQKVREAFDNL 165
Query: 187 ---KDN-IWIDIDADKD--IDTLGLIVKDIVIDTIKKSQ 219
+DN ++ID K+ D + +K + D K Q
Sbjct: 166 LQKEDNVVFIDASGTKEEVFDLINQNIKKVFEDASTKDQ 204
>gi|296817147|ref|XP_002848910.1| thymidylate kinase [Arthroderma otae CBS 113480]
gi|238839363|gb|EEQ29025.1| thymidylate kinase [Arthroderma otae CBS 113480]
Length = 233
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 124/215 (57%), Gaps = 23/215 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA +V EG DR+GK+TQ L +L +++ FPDRT S G +ID+YLR +I+L
Sbjct: 10 RGALVVVEGLDRAGKSTQCATLYQFLINQGHKVKYIRFPDRTTSIGQMIDKYLRGEIQLD 69
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE + + IE GIT+ + DRYS+SG +SA
Sbjct: 70 DHAVHLLFSANRWEAAAQIRQDIEGGITVIV-----------------DRYSYSGAVYSA 112
Query: 127 AKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE--- 181
AKE + + W ++PE GLP+PD ++ E+ +R G+G ERYE + Q+KV +
Sbjct: 113 AKENKELQLDWAWRPEIGLPRPDIWFFLNISTESAAKRGGYGTERYETVNLQKKVGKLFI 172
Query: 182 NYEKLKDNIWID-IDADKDIDTLGLIVKDIVIDTI 215
+ LK N + +DA ++I+ + ++ V+ TI
Sbjct: 173 SLSGLKGNEDMRVVDAGREIEEISRELQSEVLQTI 207
>gi|388582945|gb|EIM23248.1| putative thymidylate kinase, partial [Wallemia sebi CBS 633.66]
Length = 200
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 123/214 (57%), Gaps = 24/214 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RG FIV EG DR+GK+TQ +L++Y + + + FPDRT + G +I+ YL+ K E
Sbjct: 1 MSRGLFIVVEGLDRTGKSTQCAQLLNYFSNAGRQATLMKFPDRTTNIGQMINSYLQSKTE 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L D+A HLLFSANRWE + I G T+ DRY++SGVA+
Sbjct: 61 LNDKAIHLLFSANRWELSQYIIDTINSGTTI-----------------IADRYAYSGVAY 103
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
S AK G+D +C P+KGLP PD V L + Q+R+ +G+ERYE D Q +V ++
Sbjct: 104 SIAK-GLDYDYCKSPDKGLPIPDKVFFLDLPPQLAQQREDYGEERYESLDIQTRVRSSFM 162
Query: 185 K-LKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
K + +N +I+ ID GL V+D+ + +K+
Sbjct: 163 KIIAENQYIN-----KIDVTGLSVEDVHRELVKQ 191
>gi|353240335|emb|CCA72209.1| related to thymidylate kinase [Piriformospora indica DSM 11827]
Length = 229
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 129/227 (56%), Gaps = 39/227 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG F+V EG DRSGK+TQ+++L ++L + ++ + FPDRT + G +ID YLR + +L
Sbjct: 4 RGVFVVIEGLDRSGKSTQSQRLFEHLQEKTGKARLLKFPDRTTAIGKMIDGYLRSESDLD 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+A HLLF+ANRWE ++ + + G ++ DRY+FSG+AFSA
Sbjct: 64 DRAIHLLFAANRWECAASIERDLLAGTSI-----------------VCDRYAFSGIAFSA 106
Query: 127 AK-------EGMDI-------SWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ 172
AK EG ++ WC P+ GLP PD V+ + E + R G+G+ERYE+
Sbjct: 107 AKVAVSKSSEGNEVRESILTYEWCKSPDTGLPAPDMVIFLDVTPEVARSRGGYGEERYEK 166
Query: 173 TDFQRKVAENYEKLKDNI--------WIDIDADKDIDTLGLIVKDIV 211
+ Q +V E + K++ ++ W ++DA K +D + ++++V
Sbjct: 167 EETQLRVKEQFRKIEQDVVKNFTGIEWWNLDASKSLDEISESIRNLV 213
>gi|1836042|gb|AAB46838.1| thymidylate kinase [Mus sp.]
Length = 227
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 117/201 (58%), Gaps = 22/201 (10%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MAS+ RGA IV EG DR+GKTTQ KLV L + ++ + FP+R+ G +++ YL
Sbjct: 1 MASR--RGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLE 58
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
KK EL D + HLLFSANRWE+ P + + QG+TL + DRY+FS
Sbjct: 59 KKTELEDHSVHLLFSANRWEQVPLIKAKLNQGVTLVL-----------------DRYAFS 101
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GVAF+ AKE + WC QP+ GLPKPD +L +L R FG ERYE FQ++V
Sbjct: 102 GVAFTGAKENFSLDWCKQPDVGLPKPDLILFLQLQLLDAAARGEFGLERYETGTFQKQVL 161
Query: 181 ENYEKL---KDNIWIDIDADK 198
+++L K+ W +DA K
Sbjct: 162 LCFQQLMEEKNLNWKVVDASK 182
>gi|17535647|ref|NP_496151.1| Protein R53.2 [Caenorhabditis elegans]
gi|3024082|sp|Q22018.1|KTHY_CAEEL RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|3879168|emb|CAA91347.1| Protein R53.2 [Caenorhabditis elegans]
Length = 218
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 126/213 (59%), Gaps = 28/213 (13%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNI--------PSQFVN-FPDRTIST 51
MA+ RG IVFEG DRSGK+TQAK+LV+ +NK + PS + FPDR+ S
Sbjct: 1 MATDQKRGLLIVFEGLDRSGKSTQAKRLVESINKKSTESGDASSSPSAVLQAFPDRSSSI 60
Query: 52 GHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG 111
G +ID+YLRK+I++ + A HLLFSA+R+ + + I +GI D
Sbjct: 61 GKLIDQYLRKEIDMDEHALHLLFSADRFSKNQMIRDNIAKGI---------------DVI 105
Query: 112 CTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYE 171
C DRY +SGVA+S AK G+ W + GLPKPDAVL F ++ E +R GFG+ER E
Sbjct: 106 C--DRYCYSGVAYSLAK-GLPEQWVRSSDVGLPKPDAVLFFDVSPEVAAQRGGFGEERLE 162
Query: 172 QTDFQRKVAENYEKLKDNI-WIDIDADKDIDTL 203
Q+KVA L+D+ W ++AD D+D++
Sbjct: 163 TATIQQKVAAVMPTLRDDAYWKTVNADGDLDSV 195
>gi|393240722|gb|EJD48247.1| thymidylate kinase [Auricularia delicata TFB-10046 SS5]
Length = 246
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 103/183 (56%), Gaps = 20/183 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYL-NKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
RGAFIV EG DR+GKTTQA L D L + + P + + FPDRT + G +ID YLR EL
Sbjct: 12 RGAFIVIEGMDRAGKTTQAALLCDRLASASPRPVELIKFPDRTTAIGKMIDAYLRSATEL 71
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D+A HLLFSANRWE + + QG TL DRY+FSG+AFS
Sbjct: 72 DDRAIHLLFSANRWECAARIEAALAQGTTL-----------------VCDRYAFSGIAFS 114
Query: 126 AAKEGM--DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
AAK + WC P+ GLP PD + ++ + R G+G ERYE+ D QR V +
Sbjct: 115 AAKPALADQFDWCATPDTGLPAPDVAVFLDVSPQTAAARGGYGLERYEREDVQRAVRAVF 174
Query: 184 EKL 186
++
Sbjct: 175 ARI 177
>gi|58265708|ref|XP_570010.1| thymidylate kinase [Cryptococcus neoformans var. neoformans JEC21]
gi|57226242|gb|AAW42703.1| thymidylate kinase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 217
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 110/199 (55%), Gaps = 26/199 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIVFEG DR GK+TQ +LV L + ++ FP+RT G +ID YL+ K E+
Sbjct: 6 RGAFIVFEGLDRCGKSTQVDRLVQRLERQGHRARLQKFPERTTQIGKMIDAYLQSKTEID 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE + + + GIT+ DRY+FSG+AFSA
Sbjct: 66 DHAIHLLFSANRWECSAAIRRDLANGITV-----------------IADRYAFSGIAFSA 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+ +C P+ GLP PD L L E +R +G+ERYE Q+ V + ++ +
Sbjct: 109 AK-GLPFDFCLHPDAGLPLPDVTLYLTLPPETAAKRSAYGEERYESVSIQQAVRQQFKLV 167
Query: 187 KDNI--------WIDIDAD 197
+ I WI+I+AD
Sbjct: 168 ANEIKKRHGADKWIEIEAD 186
>gi|258571125|ref|XP_002544366.1| thymidylate kinase [Uncinocarpus reesii 1704]
gi|237904636|gb|EEP79037.1| thymidylate kinase [Uncinocarpus reesii 1704]
Length = 212
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 108/185 (58%), Gaps = 19/185 (10%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IV EG DR+GK+TQ LVD L + + ++ FPDRT S G IID YLR +++
Sbjct: 1 MTRGALIVMEGLDRAGKSTQCAVLVDKLREMGYKTNYIRFPDRTTSIGKIIDGYLRGEVQ 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L D A HLLFSANRWE + + I GI++ I DRYS+SG +
Sbjct: 61 LEDHAIHLLFSANRWELASRIHEDISNGISIVI-----------------DRYSYSGAVY 103
Query: 125 SAAKEGMDIS--WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
SAAK D+S W ++PE GLP+PD ++ E +RR G+G ERYE Q +V +
Sbjct: 104 SAAKGNKDLSLDWAWRPEIGLPRPDMWFFLNVSPEEAERRGGYGLERYENVTLQLRVGKL 163
Query: 183 YEKLK 187
++ L+
Sbjct: 164 FKSLQ 168
>gi|398392850|ref|XP_003849884.1| hypothetical protein MYCGRDRAFT_47065 [Zymoseptoria tritici IPO323]
gi|339469762|gb|EGP84860.1| hypothetical protein MYCGRDRAFT_47065 [Zymoseptoria tritici IPO323]
Length = 220
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 118/218 (54%), Gaps = 24/218 (11%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M+S RG IVFEG DRSGK+TQ +LVD+L FPDRT G +I+ YL
Sbjct: 1 MSSGTSRGHLIVFEGLDRSGKSTQCARLVDHLRSQGKEVFHQRFPDRTTVIGQMINSYLS 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
D A HLLFSANRWE ++ + IE+G T+ + DRY +S
Sbjct: 61 GTSSQEDHAIHLLFSANRWEASESIRQHIERGTTVVV-----------------DRYYYS 103
Query: 121 GVAFSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRK 178
G +SAAK+ MD++WC PE GLP+PD L + E +R GFG ERYE+ + Q +
Sbjct: 104 GCVYSAAKQNPAMDLAWCRHPEIGLPRPDLCLFLDIAAEEAAKRGGFGTERYEKQELQDR 163
Query: 179 VAENYEKLKDNI-----WIDIDADKDIDTLGLIVKDIV 211
V + + +L+ + + IDA + ++T+ + D V
Sbjct: 164 VRDLFAELQTHPDEAEDIVVIDAGQSVETVEQSIHDAV 201
>gi|159467731|ref|XP_001692045.1| hypothetical protein CHLREDRAFT_128562 [Chlamydomonas reinhardtii]
gi|158278772|gb|EDP04535.1| predicted protein [Chlamydomonas reinhardtii]
Length = 214
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 118/215 (54%), Gaps = 19/215 (8%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
PRGA IVFEG DR GKTTQ K+V+ L + + FPDR+ S G I+ YL + +L
Sbjct: 7 PRGALIVFEGGDRCGKTTQCSKMVERLKSQGVDAVMWRFPDRSTSIGAAINAYLSNQSQL 66
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D H+LF ANR E+ + +L+ G TL + DRYS+SGVA++
Sbjct: 67 DDAVIHMLFVANRLEKRDEMLRLLAGGTTLVL-----------------DRYSYSGVAYT 109
Query: 126 AAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
AAK + I +C E LP D V+ ++ EA R G+G+ERYE+ +FQ +V E +
Sbjct: 110 AAKGVPHLSIDYCKSLEVVLPAADLVVHMSMSAEATAARGGYGEERYEKVEFQARVMEAF 169
Query: 184 EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKS 218
+L+D W IDA ID + V +V ++++
Sbjct: 170 GQLRDERWAAIDAAGTIDAIHEQVAAVVEPVVRRT 204
>gi|345569862|gb|EGX52688.1| hypothetical protein AOL_s00007g471 [Arthrobotrys oligospora ATCC
24927]
Length = 227
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 123/229 (53%), Gaps = 33/229 (14%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI 63
PRGA I EG DR+GK+TQ L+ L + IP++ FPDRT G +I+ YL
Sbjct: 5 HTPRGALIAIEGLDRAGKSTQCDLLLKRLLSSGIPAKLQKFPDRTTPIGTMINSYLTSTS 64
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
L DQA HLLFSANRWE L + G TL + DRY +SG+
Sbjct: 65 NLDDQAIHLLFSANRWEARDHLLSSLNSGTTLLL-----------------DRYIYSGIV 107
Query: 124 FSAAK--------EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDF 175
FSAAK + ISWC P+ GLP+PD ++ +++E ++R GFGDERYE+ +
Sbjct: 108 FSAAKPPTPVQNPNPLSISWCKSPDIGLPRPDIIIFLNISQEDAEKRAGFGDERYEKREL 167
Query: 176 QRKVAENYEKL-------KDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
Q KV +E+L KD+ W+ +DA ++ + V V++ +K+
Sbjct: 168 QDKVRRLFEELRGEGSNDKDDWWV-VDAGGTVEEVADEVWKGVLEGLKR 215
>gi|195121060|ref|XP_002005039.1| GI19275 [Drosophila mojavensis]
gi|193910107|gb|EDW08974.1| GI19275 [Drosophila mojavensis]
Length = 211
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 124/221 (56%), Gaps = 21/221 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIVFEGCDR GK+TQ+ +L + L + I ++ +NFP+R+ G +I+ +L+ EL
Sbjct: 6 RGAFIVFEGCDRVGKSTQSNQLCERLKEKGIAAKKINFPNRSTIIGDVINRFLKNTQELS 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ HLLFSANRWE ++ + G T+ DRY++SGV +S
Sbjct: 66 HEVIHLLFSANRWECMSSIQADLLAGTTI-----------------ICDRYAYSGVVYSV 108
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D+ WC+ P+ GL KPDAV K N + L R FG+ERYE+ + QRKV++ ++
Sbjct: 109 AK-GLDLDWCWAPDLGLLKPDAVFYLKANPDQLASRGSFGNERYEKLELQRKVSDLFDHF 167
Query: 187 KD---NIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
+ + W DA + L + I + + + PLE
Sbjct: 168 NEKESSYWHQFDAFETEQELHSKISTIAENLLLQVADKPLE 208
>gi|326469002|gb|EGD93011.1| thymidylate kinase [Trichophyton tonsurans CBS 112818]
Length = 182
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 112/191 (58%), Gaps = 22/191 (11%)
Query: 1 MASQIP---RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDE 57
+ S+IP RGA +V EG DR+GK+TQ +L +L ++++ FPDRT + G +I++
Sbjct: 3 LESEIPASRRGALVVVEGLDRAGKSTQCARLHQFLVNQGHETKYIRFPDRTTAIGKMINQ 62
Query: 58 YLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
YLR +I+L D A HLLFSANRWE + + IE GIT+ + DRY
Sbjct: 63 YLRGEIQLDDHAVHLLFSANRWEAAAQIRRDIESGITVIV-----------------DRY 105
Query: 118 SFSGVAFSAAKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDF 175
S+SG +SAAKE + + W ++PE GLP+PD ++ E R G+G ERYE +
Sbjct: 106 SYSGAVYSAAKENKELQLDWAWRPEVGLPRPDIWFFLNISTEVAAARGGYGTERYETVNL 165
Query: 176 QRKVAENYEKL 186
Q+KV + + L
Sbjct: 166 QKKVGKLFLSL 176
>gi|154308900|ref|XP_001553785.1| hypothetical protein BC1G_07978 [Botryotinia fuckeliana B05.10]
Length = 242
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 128/242 (52%), Gaps = 38/242 (15%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
A I RG+FI+ EG DR+GKTTQ KKL D L + + + FPDRT + G I+ YL+
Sbjct: 15 ADPISRGSFILIEGLDRAGKTTQVKKLCDKLYASGRNVKLMRFPDRTTAIGQQINSYLQS 74
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
LPDQ+ HLLFSANRWE+ + LI QG T+ DRY +SG
Sbjct: 75 STALPDQSIHLLFSANRWEKAQEIRDLIAQGYTI-----------------VCDRYYYSG 117
Query: 122 VAFSAAKEGMD------ISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDF 175
+ ++++K +D + WC PE GLP PD V+ L E ++R G+GDE+YE +
Sbjct: 118 MIYTSSKYSIDSPNHLSLEWCKNPEIGLPMPDRVIFLDLEPEEAEKRGGYGDEKYETREM 177
Query: 176 QRKVAENYEKLKDN----------IWIDIDADKDIDTLG----LIVKDIVIDTIKKSQFS 221
QR+V + L+++ I IDA +D + VKDIV + I+K +
Sbjct: 178 QRRVRNGFLSLQNSAVPGFEQEQRIMKAIDAGDGLDEVAEKIWHAVKDIV-EQIEKGEHG 236
Query: 222 PL 223
L
Sbjct: 237 EL 238
>gi|389586600|dbj|GAB69329.1| thymidylate kinase, partial [Plasmodium cynomolgi strain B]
Length = 219
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 130/222 (58%), Gaps = 20/222 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FIVFEG DRSGK+TQ+K LV++L + N+ + FP+R TG II +YL+ + +
Sbjct: 15 KGKFIVFEGLDRSGKSTQSKLLVEHLRRKNMEVNHLCFPNRETPTGQIIAKYLKMQSNMT 74
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
++ HLLFSANRWE + +L+ +G+ + DRY++SGVA+SA
Sbjct: 75 NETIHLLFSANRWELMGEIKRLLAKGVWV-----------------VCDRYAYSGVAYSA 117
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
+ +WC P++GL KPD V + Q R +G+E YE+ + Q+++ E Y+
Sbjct: 118 GALKLPKTWCMNPDQGLIKPDVVFYLNVPPNYAQNRSEYGEEIYEKVEVQKRIYETYKNF 177
Query: 187 -KDNIWIDIDADKDIDTLGL-IVKDIV-IDTIKKSQFSPLES 225
+++ WI++D K+ID + +V +I ++T+ + F+ L S
Sbjct: 178 SQEDYWINLDGTKNIDDIHQDVVSEITKLETVHEELFTFLWS 219
>gi|119183198|ref|XP_001242660.1| hypothetical protein CIMG_06556 [Coccidioides immitis RS]
gi|392865564|gb|EAS31362.2| thymidylate kinase [Coccidioides immitis RS]
Length = 228
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 108/186 (58%), Gaps = 19/186 (10%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI 63
++ RGA IV EG DR+GK+TQ LVD L + ++++ FPDRT S G IID YLR +
Sbjct: 13 KMARGALIVIEGLDRAGKSTQCAILVDKLREKGHETKYIRFPDRTTSIGKIIDGYLRGET 72
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+L D A HLLFSANRWE + + I GI++ I DRYS+SG
Sbjct: 73 QLDDHAIHLLFSANRWELASQIRQDISNGISIVI-----------------DRYSYSGAV 115
Query: 124 FSAAKEGMDIS--WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
+SAAK ++S W +QPE GLP+PD ++ E + R G+G ERYE Q +V E
Sbjct: 116 YSAAKNNRELSLEWAWQPEIGLPRPDLWFFLNISPEEAESRGGYGLERYENVTLQLRVGE 175
Query: 182 NYEKLK 187
++ ++
Sbjct: 176 LFKSMQ 181
>gi|156096007|ref|XP_001614038.1| thymidylate kinase [Plasmodium vivax Sal-1]
gi|148802912|gb|EDL44311.1| thymidylate kinase, putative [Plasmodium vivax]
Length = 219
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 116/196 (59%), Gaps = 18/196 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FIVFEG DRSGK+TQ+K LV++L + N+ + FP+R TG II +YL+ + ++
Sbjct: 15 KGKFIVFEGLDRSGKSTQSKLLVEHLRRKNVEVNHLCFPNRETPTGQIIAKYLKMQSDMT 74
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
++ HLLFSANRWE + +L+ G+ + DRY++SGVA+SA
Sbjct: 75 NETIHLLFSANRWELMGEIKRLLASGVWV-----------------VCDRYAYSGVAYSA 117
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
+ +WC P++GL KPD V + Q R +G+E YE+ + Q+++ E Y+
Sbjct: 118 GALKLSKTWCMNPDQGLIKPDVVFYLNVPPNYAQNRSEYGEEIYEKVEVQKRIYETYKNF 177
Query: 187 -KDNIWIDIDADKDID 201
+++ WI++D K+ID
Sbjct: 178 SQEDYWINLDGTKNID 193
>gi|68067163|ref|XP_675552.1| thymidylate kinase [Plasmodium berghei strain ANKA]
gi|56494802|emb|CAH95718.1| thymidylate kinase, putative [Plasmodium berghei]
Length = 218
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 125/226 (55%), Gaps = 20/226 (8%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+ +G FIVFEG DRSGK+TQ+K LV++L NNI Q++ FP+R + G II YL+ +
Sbjct: 10 TNFKKGNFIVFEGVDRSGKSTQSKLLVEHLKNNNIQVQYLCFPNRETTIGKIIANYLKME 69
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
++ HLLFSANRWE + L+ GI + DRY++SGV
Sbjct: 70 STFSNETIHLLFSANRWEMMDQIKNLLINGIWV-----------------ICDRYAYSGV 112
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
A+S+ + WC P+KGL KPDAV + + R +G E YE+ + Q+++ E
Sbjct: 113 AYSSGALKLPKEWCMNPDKGLIKPDAVCYLNVPPTYAKNRSEYGKEIYEKFEIQKRIYEA 172
Query: 183 YEKLKD-NIWIDIDADKDIDTL-GLIVKDIV-IDTIKKSQFSPLES 225
YE + + WI+IDA K I + IV++I + + KK Q L S
Sbjct: 173 YEHFSNEDYWINIDATKSIQEIHNTIVEEISKMCSSKKKQLEYLWS 218
>gi|449017488|dbj|BAM80890.1| dTMP kinase [Cyanidioschyzon merolae strain 10D]
Length = 211
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 123/221 (55%), Gaps = 20/221 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKN-NIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
RG I FEG DR+GK+TQAK+ + ++ + P+ +FP+R +TG ++D YL EL
Sbjct: 5 RGTLIAFEGGDRAGKSTQAKQALQWIRETLREPAVLWHFPNRHSATGRLLDTYLSGSTEL 64
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
Q AHLLF+ANRWER L +L++ G H L DRY++SGVAFS
Sbjct: 65 TGQVAHLLFAANRWERVEELWQLLDSG-----SHVIL------------DRYAYSGVAFS 107
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY-- 183
A G+D WC ++GLP PD VL L+ + +R FG+ERYEQ Q++V + +
Sbjct: 108 VAARGLDPEWCLAADRGLPSPDLVLFLDLDPQLASKRGNFGEERYEQLVIQQRVRQFFLD 167
Query: 184 EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
+ W+ I A++ D + L + + + + + + PL+
Sbjct: 168 RLFQSENWVRISAEQPPDQVQLQCRRAITEMLPRVRSLPLK 208
>gi|156044845|ref|XP_001588978.1| hypothetical protein SS1G_09611 [Sclerotinia sclerotiorum 1980]
gi|154694006|gb|EDN93744.1| hypothetical protein SS1G_09611 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 242
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 124/229 (54%), Gaps = 33/229 (14%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RG+FI+ EG DR+GKTTQ +KL D L + + + FPDRT S G I+ YL+
Sbjct: 18 LSRGSFILIEGLDRAGKTTQVRKLCDRLYASGRNVKLMRFPDRTTSIGQQINSYLQSSTI 77
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
LPDQA HLLFSANRWE+ + + I QG T+ DRY +SG+ +
Sbjct: 78 LPDQAIHLLFSANRWEKAQEIHQFIAQGYTI-----------------VCDRYYYSGMIY 120
Query: 125 SAAKEGMD------ISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRK 178
+++K D + WC PE GLP PD V+ L E ++R G+GDE+YE + QR+
Sbjct: 121 TSSKYPTDSPNHLSLEWCKNPEIGLPMPDKVIFLDLEPEEAEKRGGYGDEKYETREMQRR 180
Query: 179 VAENYEKLKD----------NIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
V + + +L++ +I I+A +D + + D V+ +++
Sbjct: 181 VRDGFLRLQNTAIKGFEHERSIMKAINAGSGVDEVAEKIWDTVVTLVEQ 229
>gi|71018245|ref|XP_759353.1| hypothetical protein UM03206.1 [Ustilago maydis 521]
gi|46099078|gb|EAK84311.1| hypothetical protein UM03206.1 [Ustilago maydis 521]
Length = 1208
Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats.
Identities = 82/203 (40%), Positives = 116/203 (57%), Gaps = 29/203 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FIV EG DR+GK+TQ ++L +L ++ V FP+RT + G +I+ YL + +L
Sbjct: 425 RGFFIVVEGLDRAGKSTQVERLAAHLQ-----AKAVKFPERTTAIGQMINSYLAQTSDLD 479
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
DQA HLLFSANRWE +L + +E G + DRY+FSG+A+S
Sbjct: 480 DQAIHLLFSANRWECVASLHRTLEAG-----------------ESIVCDRYAFSGIAYSV 522
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+ WC P+ GLP PD L L+ A R G+G+ERYE+ DFQ KV E + ++
Sbjct: 523 AK-GLSYDWCRNPDVGLPLPDLTLFLDLDANAAAARGGYGEERYEKLDFQAKVREAFTRV 581
Query: 187 KDNI------WIDIDADKDIDTL 203
++ W+ IDA K +D +
Sbjct: 582 SQDVRTHGGRWVTIDASKTLDQV 604
>gi|377830034|ref|YP_005296194.1| unnamed protein product [Cotia virus SPAn232]
gi|377830120|ref|YP_005296368.1| unnamed protein product [Cotia virus SPAn232]
gi|377814277|gb|AFB76896.1| thymidylate kinase [Cotia virus SPAn232]
gi|377814363|gb|AFB76982.1| thymidylate kinase [Cotia virus SPAn232]
Length = 210
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 123/221 (55%), Gaps = 23/221 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IVFEG DR GK+TQ + LV+ L ++ + FP R+ G +I YL KKI+L
Sbjct: 4 RGALIVFEGLDRVGKSTQTRMLVNKLCNLGYKAELLEFPKRSTDIGRVITLYLEKKIDLE 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
HLLFSANRWE P + + I +GITL + DRYSFSG+A++
Sbjct: 64 PHCVHLLFSANRWEHVPLIQEKINKGITLVV-----------------DRYSFSGIAYTL 106
Query: 127 A-KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
A K+ + + W Q + G+PKPD ++ K + ++ R FG ERYE DFQ V ++K
Sbjct: 107 AKKKNISLEWTIQSDSGIPKPDMIIFLKFDN--VESRTSFGIERYETVDFQNNVMVYFKK 164
Query: 186 L---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
L K W IDA K+I+ + + + + I+K +++ L
Sbjct: 165 LINDKSLYWEIIDASKNINDIHDEITKLSENIIEKVRYTSL 205
>gi|391870631|gb|EIT79808.1| thymidylate kinase/adenylate kinase [Aspergillus oryzae 3.042]
Length = 225
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 108/184 (58%), Gaps = 19/184 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK++Q + L DYL ++ ++V FPDRT + G +ID YLR + +L
Sbjct: 11 RGALIVVEGLDRAGKSSQCESLRDYLQESGHSVKYVRFPDRTTAIGKLIDSYLRGQSQLD 70
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE + + I +GIT+ + DRYS+SG +SA
Sbjct: 71 DHSIHLLFSANRWEIAKVIEEDIAKGITVIV-----------------DRYSYSGAVYSA 113
Query: 127 AK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK + + W +QPE GLP+PD L +++ +R GFG ERYE Q +V E ++
Sbjct: 114 AKGIPTLSLGWAWQPEVGLPRPDMCLFLRISPTEAAKRGGFGVERYENETMQSRVRELFQ 173
Query: 185 KLKD 188
L D
Sbjct: 174 TLFD 177
>gi|169776481|ref|XP_001822707.1| thymidylate kinase [Aspergillus oryzae RIB40]
gi|83771442|dbj|BAE61574.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 225
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 108/184 (58%), Gaps = 19/184 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK++Q + L DYL ++ ++V FPDRT + G +ID YLR + +L
Sbjct: 11 RGALIVVEGLDRAGKSSQCENLRDYLQESGHSVKYVRFPDRTTAIGKLIDSYLRGQSQLD 70
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE + + I +GIT+ + DRYS+SG +SA
Sbjct: 71 DHSIHLLFSANRWEIAKVIEEDIAKGITVIV-----------------DRYSYSGAVYSA 113
Query: 127 AK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK + + W +QPE GLP+PD L +++ +R GFG ERYE Q +V E ++
Sbjct: 114 AKGIPTLSLGWAWQPEVGLPRPDMCLFLRISPTEAAKRGGFGVERYENETMQSRVRELFQ 173
Query: 185 KLKD 188
L D
Sbjct: 174 TLFD 177
>gi|319411558|emb|CBQ73602.1| related to thymidylate kinase [Sporisorium reilianum SRZ2]
Length = 1229
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 82/218 (37%), Positives = 122/218 (55%), Gaps = 37/218 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FIV EG DR+GK+TQ ++L +L+ ++ + FP+RT + G +I+ YL + +L
Sbjct: 430 RGFFIVVEGLDRAGKSTQVERLAQHLH-----AKAIKFPERTTAIGQMINSYLAQTSDLD 484
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
DQA HLLFSANRWE ++ K ++ G + DRY+FSG+A+S
Sbjct: 485 DQAIHLLFSANRWECVASIKKTLDAG-----------------ESIVCDRYAFSGIAYSV 527
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+ WC P+ GLP PD + L+ E R G+G+ERYE+ DFQ KV + + ++
Sbjct: 528 AK-GLSYDWCRNPDVGLPLPDLTMFLDLDAETAAARGGYGEERYEKLDFQAKVRDAFTRV 586
Query: 187 KDNI------WIDIDADKDIDTLGLIVKDIVIDTIKKS 218
++ W+ IDA K +D V D I+K+
Sbjct: 587 SQDVRAHGGRWVTIDASKTLDQ--------VTDDIQKA 616
>gi|238503185|ref|XP_002382826.1| thymidylate kinase [Aspergillus flavus NRRL3357]
gi|220691636|gb|EED47984.1| thymidylate kinase [Aspergillus flavus NRRL3357]
Length = 225
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 108/184 (58%), Gaps = 19/184 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK++Q + L DYL ++ ++V FPDRT + G +ID YLR + +L
Sbjct: 11 RGALIVVEGLDRAGKSSQCENLRDYLQESGHSVKYVRFPDRTTAIGKLIDSYLRGQSQLD 70
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE + + I +GIT+ + DRYS+SG +SA
Sbjct: 71 DHSIHLLFSANRWEIAKVIEEDIAKGITVIV-----------------DRYSYSGAVYSA 113
Query: 127 AK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK + + W +QPE GLP+PD L +++ +R GFG ERYE Q +V E ++
Sbjct: 114 AKGIPTLSLGWAWQPEVGLPRPDMCLFLRISPTEAAKRGGFGVERYENETMQSRVRELFQ 173
Query: 185 KLKD 188
L D
Sbjct: 174 TLFD 177
>gi|70984984|ref|XP_747998.1| thymidylate kinase [Aspergillus fumigatus Af293]
gi|66845626|gb|EAL85960.1| thymidylate kinase [Aspergillus fumigatus Af293]
gi|159126077|gb|EDP51193.1| thymidylate kinase [Aspergillus fumigatus A1163]
Length = 221
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 122/223 (54%), Gaps = 23/223 (10%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M SQ RGA IVFEG DR+GK++Q ++L D L + +++ FPDRT G +I YL+
Sbjct: 1 MNSQRNRGALIVFEGLDRAGKSSQCERLRDSLQASGHSVKYIRFPDRTTPIGKLISSYLQ 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ + D + HLLFSANRWE ++ I GI++ + DRYS+S
Sbjct: 61 GQSQADDHSIHLLFSANRWEIAKSIEDDIANGISVIV-----------------DRYSYS 103
Query: 121 GVAFSAAKEGMDIS--WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRK 178
G +SAAK ++S W +QPE GLP+PD L +++ E +R GFG ERYE Q +
Sbjct: 104 GAVYSAAKGNPNLSLEWAWQPEIGLPQPDMCLFLRISPEEAAKRGGFGVERYENETMQNR 163
Query: 179 VAENYEKLKDNIWID----IDADKDIDTLGLIVKDIVIDTIKK 217
V E ++ L D D IDA + D + + IV D I +
Sbjct: 164 VRELFQTLFDLQQGDYIHTIDAGRSFDAVSQDIMKIVTDYIGR 206
>gi|358392751|gb|EHK42155.1| hypothetical protein TRIATDRAFT_31632 [Trichoderma atroviride IMI
206040]
Length = 268
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 105/182 (57%), Gaps = 19/182 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIV EG DRSGKTTQ K L + P++ + FPDRT + G +ID YL+ +EL
Sbjct: 33 RGAFIVLEGLDRSGKTTQVKLLEQRFVEEGRPAKVMRFPDRTTAIGQLIDGYLKSHVELD 92
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE + + GI++ +DR+ SG+ +SA
Sbjct: 93 DHAIHLLFSANRWESAAQIRAYLAAGISV-----------------VSDRFYHSGIVYSA 135
Query: 127 AKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK+ + +SW P+ GLP+PD VL L+EE + R G+G E+YE+ + QR V E +
Sbjct: 136 AKKNPHLPLSWARSPDVGLPRPDVVLFLDLDEETARSRGGWGSEKYEKEEMQRTVRELFW 195
Query: 185 KL 186
L
Sbjct: 196 AL 197
>gi|308472179|ref|XP_003098318.1| hypothetical protein CRE_07671 [Caenorhabditis remanei]
gi|308269166|gb|EFP13119.1| hypothetical protein CRE_07671 [Caenorhabditis remanei]
Length = 210
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 122/205 (59%), Gaps = 20/205 (9%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVN-FPDRTISTGHIIDEYL 59
MA+ RG IVFEG DRSGK+TQAK+LV+ LNK S + FPDR+ G +ID+YL
Sbjct: 1 MAAAQKRGVLIVFEGLDRSGKSTQAKRLVESLNKRAEGSAVLQAFPDRSSPIGKLIDQYL 60
Query: 60 RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
+K+I+L + + HL+FSA+R+ + + + I +GI D C DRY +
Sbjct: 61 KKEIDLDEHSLHLMFSADRFLKNQMIRENIAKGI---------------DVIC--DRYCY 103
Query: 120 SGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
SGVA+S AK G+ W + GLPKPDAVL F ++ +R GFG ER E Q+KV
Sbjct: 104 SGVAYSLAK-GLPEQWVRSSDVGLPKPDAVLFFDVSPAVAAQRGGFGAERLETATMQQKV 162
Query: 180 AENYEKLKDN-IWIDIDADKDIDTL 203
A L+D+ W ++AD D+DT+
Sbjct: 163 AAVMPTLRDDSFWKTVNADGDLDTV 187
>gi|300120775|emb|CBK21017.2| unnamed protein product [Blastocystis hominis]
Length = 208
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 118/224 (52%), Gaps = 22/224 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RG FIV EG DRSGKT+Q ++V+ LN +I ++F FP+RT G I++YL+ E
Sbjct: 1 MKRGVFIVIEGVDRSGKTSQCHRIVERLNAEDITAKFYGFPNRTTQIGQQINKYLQNATE 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ + HLLFSANRWE ++ + ++ G+ + DRY SGVA+
Sbjct: 61 IENHCVHLLFSANRWELSKSILEDLKNGVNI-----------------ICDRYIASGVAY 103
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
S + G+D+ WC +KGLP PD +L E RR GFG+ER E +FQ+ VAE +
Sbjct: 104 SVTR-GLDMEWCIHSDKGLPAPDVTFQLELPIEEQMRRAGFGEERLETREFQQSVAEAFR 162
Query: 185 KLKDNI----WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
+L W + A ID + + +V + I P +
Sbjct: 163 RLSSEFYPYTWTPVSALGSIDEVHERLYGLVKNAISDCCAHPYQ 206
>gi|392577333|gb|EIW70462.1| hypothetical protein TREMEDRAFT_38210 [Tremella mesenterica DSM
1558]
Length = 220
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 122/232 (52%), Gaps = 32/232 (13%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M SQ RGAFIVFEG DRSGK+TQ +V L + + FPDRT G +ID YL+
Sbjct: 6 MTSQ--RGAFIVFEGLDRSGKSTQVGAVVARLQREGRKVRLQKFPDRTTRIGGMIDAYLQ 63
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
K EL D + HLLFSANRWE + + + G + DRY+FS
Sbjct: 64 SKSELDDHSIHLLFSANRWECANAIERDVSSGTIV-----------------IADRYAFS 106
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
G+AFSAAK G+ +C P+ GLP PD + L+ E R +G+ERYE + Q++V
Sbjct: 107 GIAFSAAK-GLSFQYCLNPDTGLPLPDRTVYLTLSPEVAASRGAYGEERYETLEMQKRVR 165
Query: 181 ENY--------EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
E + + D+ W +I+AD ++ V+ ++ + I+ PL+
Sbjct: 166 EQFTLVAEETRRRHGDDRWAEINADGTVEE----VEALIWENIQPVIMEPLQ 213
>gi|406702600|gb|EKD05587.1| hypothetical protein A1Q2_00077 [Trichosporon asahii var. asahii
CBS 8904]
Length = 214
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 107/186 (57%), Gaps = 18/186 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG DRSGKTTQ +L+ L K ++ FPDRT G +ID YL+ K E
Sbjct: 2 VQRGALIVFEGLDRSGKTTQVDRLIARLQKEGRKARLQKFPDRTTGIGKMIDAYLQSKAE 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ D A HLLFSANRWE ++ ++ G ++ + DRY+FSG+AF
Sbjct: 62 MDDHAIHLLFSANRWECVSSILASLDAGESVVV-----------------DRYAFSGLAF 104
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
SAAK G+D +C P+ GLP PD L L+ E +R +G ERYE + Q++V +
Sbjct: 105 SAAK-GLDFGYCQAPDVGLPLPDLTLYLTLSPEVAAQRGAYGQERYENVELQKEVRRQFA 163
Query: 185 KLKDNI 190
+ D++
Sbjct: 164 AVFDDL 169
>gi|119498863|ref|XP_001266189.1| thymidylate kinase [Neosartorya fischeri NRRL 181]
gi|119414353|gb|EAW24292.1| thymidylate kinase [Neosartorya fischeri NRRL 181]
Length = 221
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 123/223 (55%), Gaps = 23/223 (10%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M SQ RGA IV EG DR+GK++Q ++L D L + +++ FPDRT G +I YL+
Sbjct: 1 MNSQRNRGALIVVEGLDRAGKSSQCERLRDSLQASGHSVKYIRFPDRTTPIGKLISSYLQ 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ + D + HLLFSANRWE ++ I GI++ + DRYS+S
Sbjct: 61 GQSQADDHSIHLLFSANRWEIAKSIEDDIANGISVIV-----------------DRYSYS 103
Query: 121 GVAFSAAKEGMDIS--WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRK 178
G +SAAK ++S W +QPE GLP+PD L +++ E +R GFG ERYE Q +
Sbjct: 104 GAVYSAAKGNRNLSLEWAWQPEIGLPQPDMCLFLRISPEEAAKRGGFGVERYENETMQNR 163
Query: 179 VAENYEKLKDNIWID----IDADKDIDTLGLIVKDIVIDTIKK 217
V E ++ L D D IDA + D + + IV D+I++
Sbjct: 164 VRELFQTLFDLQQGDYVHTIDAGRSFDAVSQDIMKIVTDSIER 206
>gi|156544086|ref|XP_001605460.1| PREDICTED: thymidylate kinase-like [Nasonia vitripennis]
Length = 209
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 123/196 (62%), Gaps = 18/196 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGAFIV EG DR+GK+TQ +V+ L + N+P + FPDR+ + G II++YL KKIE
Sbjct: 1 MARGAFIVLEGLDRAGKSTQVSMIVEALKERNVPVERRVFPDRSTAIGGIINDYLAKKIE 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L +A HLLFSANRWE + + + +E+G TL + DRY+ SG A+
Sbjct: 61 LAPEAVHLLFSANRWECKDGILETLEKGTTLIV-----------------DRYAASGAAY 103
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
SAA G +SWC P++GLP PD VL + + Q+R +G+ER+E+ + QRKVAEN+
Sbjct: 104 SAATTGRPLSWCTSPDQGLPAPDLVLYLDVTPDTQQQRSNWGEERFERAETQRKVAENFR 163
Query: 185 KLKDNI-WIDIDADKD 199
KL ++ W ++A D
Sbjct: 164 KLSESGNWAFVEAGLD 179
>gi|225711618|gb|ACO11655.1| Thymidylate kinase [Caligus rogercresseyi]
Length = 216
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 120/216 (55%), Gaps = 29/216 (13%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDR-TISTGHIIDEYLR 60
+S + RGAFIV EGCDRSGKTT AK+L D + +F FPDR + TG +I+ +L
Sbjct: 3 SSAVKRGAFIVLEGCDRSGKTTIAKRLSD-----SPGFEFFRFPDRDSPLTGSLINSFLT 57
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ Q HLLFSANRWE+ P++ ++ G KN+ DRY++S
Sbjct: 58 GGTPMSSQLIHLLFSANRWEKVPSMLSVLSAG-------------KNI----ICDRYAYS 100
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
G+A+S++K GMD WC P+ GLP PD V+ ++ E +R GFG+E YE+ FQ KV
Sbjct: 101 GIAYSSSKPGMDFDWCAGPDNGLPTPDLVIFLDVSPEQALKRGGFGEEVYEKVGFQAKVR 160
Query: 181 ENYE-----KLKDNIWIDIDADKDIDTLGLIVKDIV 211
+ Y K + WI D K +D VK +V
Sbjct: 161 DIYTTKLVGKGGEWKWISTDG-KTLDDTYCAVKTLV 195
>gi|219121041|ref|XP_002185752.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582601|gb|ACI65222.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 245
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 111/190 (58%), Gaps = 23/190 (12%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI 63
+I RGAF+V EG DR GKTTQ+ L+ L I + + FPDRT +TG IID+YL+
Sbjct: 7 KISRGAFVVLEGVDRCGKTTQSGLLLKRLLAAGIAACSMRFPDRTTATGKIIDQYLQSSQ 66
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
L D+A HLLFSANRWE LT ++ G T+ DRY++SGVA
Sbjct: 67 NLDDRAIHLLFSANRWESADALTAHLQAGTTV-----------------LCDRYAYSGVA 109
Query: 124 FSAA---KEG---MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQR 177
FSA+ K+G + + WC P++GLP PD V+ L++ ++R G+G ERYE+ + Q
Sbjct: 110 FSASKIDKKGNSLLSLDWCQAPDQGLPAPDCVIFLDLSQAEAEQRGGYGGERYEKKEMQI 169
Query: 178 KVAENYEKLK 187
+V + L+
Sbjct: 170 RVRHRFGDLE 179
>gi|221062039|ref|XP_002262589.1| thymidylate kinase [Plasmodium knowlesi strain H]
gi|193811739|emb|CAQ42467.1| thymidylate kinase, putative [Plasmodium knowlesi strain H]
Length = 219
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 125/211 (59%), Gaps = 21/211 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FIVFEG DRSGK+TQ+K LV++L + N+ + FP+R TG II +YL+ + ++
Sbjct: 15 KGKFIVFEGLDRSGKSTQSKLLVEHLRRKNVEVNHLCFPNRETPTGQIIAKYLKMQNDMT 74
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
++ HLLFSANRWE + +L+ +G+ + DRY++SGVA+S+
Sbjct: 75 NETIHLLFSANRWELMGEIKRLLSKGVWV-----------------VCDRYAYSGVAYSS 117
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
+ +WC P++GL KPD V + Q+R +G+E YE+ + Q+++ E Y+
Sbjct: 118 GALKLSKTWCMNPDQGLIKPDVVFYLNVPPNYAQQRSEYGEEIYEKVEVQKRIYEAYKNF 177
Query: 187 -KDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
+++ WI++D K+I+ I +D+V + K
Sbjct: 178 SQEDYWINLDGTKNIND---IHQDVVNEITK 205
>gi|167393075|ref|XP_001740414.1| thymidylate kinase [Entamoeba dispar SAW760]
gi|165895464|gb|EDR23144.1| thymidylate kinase, putative [Entamoeba dispar SAW760]
Length = 210
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 123/221 (55%), Gaps = 21/221 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG IV EG D+SGK++ A+++ + L K I S FPDR+ G +IDE+L K LP
Sbjct: 5 RGLLIVLEGIDQSGKSSAAQRVCEMLEKKGIQSIKQPFPDRSTDIGKLIDEFLHGK-NLP 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
Q HLL+SANRWE + + +E+GIT+ DRY+FSG+ +S
Sbjct: 64 QQVVHLLYSANRWEVAQKIKETLEKGITI-----------------ICDRYAFSGIVYSI 106
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENYEK 185
A G+D WC + GLPKPD V +L+ E+A QRRK +RYE FQ KV YEK
Sbjct: 107 AN-GLDERWCNSADSGLPKPDIVFFLELSLEDAEQRRKTMKTDRYENIKFQSKVKCEYEK 165
Query: 186 LKDNI-WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
KD++ W IDA + + + L + I+ + + P+++
Sbjct: 166 FKDSMKWTCIDARQSKEEVALEITSIIEQQLPQLSNQPIKT 206
>gi|67477898|ref|XP_654383.1| Thymidylate kinase [Entamoeba histolytica HM-1:IMSS]
gi|56471425|gb|EAL48995.1| Thymidylate kinase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449710743|gb|EMD49762.1| thymidylate kinase, putative [Entamoeba histolytica KU27]
Length = 210
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 124/223 (55%), Gaps = 21/223 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
I RG IV EG D+SGK++ +++ + L K I S FPDR+ G +IDE+L K
Sbjct: 3 INRGLLIVLEGIDQSGKSSATQRVCELLEKKGIQSVKQPFPDRSTDIGKLIDEFLHGK-N 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
LP Q HLL+SANRWE + + +E+GIT+ DRY+FSG+ +
Sbjct: 62 LPQQVVHLLYSANRWEVAQNIKETLEKGITV-----------------ICDRYAFSGIVY 104
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENY 183
S A G+D WC + GLPKPD V +L+ E+A +RRK +RYE T FQ KV Y
Sbjct: 105 SIAN-GLDEKWCNSADCGLPKPDIVFFLELSLEDAEKRRKTMKTDRYENTKFQSKVKCEY 163
Query: 184 EKLKDNI-WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
EK KD++ W IDA + + + L + I+ + + P+++
Sbjct: 164 EKFKDSMKWTCIDASQSKEEVALEITSIIEQQLPQLSNQPIKT 206
>gi|406866431|gb|EKD19471.1| thymidylate kinase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 238
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 19/187 (10%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
A I RGAFIV EG DR+GKTTQ K++ D L + + + FPDRT G +ID YL+
Sbjct: 15 ADPITRGAFIVIEGLDRAGKTTQVKRICDRLYASGHNVKTIRFPDRTSPIGSMIDRYLQS 74
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+E+ D A HLLFSANRWE+ + + G T+ DRY +SG
Sbjct: 75 ALEMDDHAIHLLFSANRWEKAKWIRNTLASGSTI-----------------VCDRYYYSG 117
Query: 122 VAFSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
+ +SAAK+ + +SW P+ GLPKPD V+ L E ++R G+G+E+YE+ D Q +V
Sbjct: 118 MVYSAAKQNPSLSLSWAQSPDAGLPKPDVVVFLDLEAEEAEKRGGYGEEKYEKRDMQMRV 177
Query: 180 AENYEKL 186
E + L
Sbjct: 178 RELFLAL 184
>gi|303319671|ref|XP_003069835.1| thymidylate kinase, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240109521|gb|EER27690.1| thymidylate kinase, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320034114|gb|EFW16059.1| thymidylate kinase [Coccidioides posadasii str. Silveira]
Length = 228
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 107/186 (57%), Gaps = 19/186 (10%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI 63
++ RGA IV EG DR+GK+TQ LVD L + ++++ FPDRT S G IID YLR +
Sbjct: 13 KMARGALIVIEGLDRAGKSTQCAILVDKLREKGHETKYIRFPDRTTSIGKIIDGYLRGET 72
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+L D A HLLFSANRWE + + I GI++ I DRYS+SG
Sbjct: 73 QLDDHAIHLLFSANRWELASQIRQDISNGISIVI-----------------DRYSYSGAV 115
Query: 124 FSAAKEGMDIS--WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
+SAAK ++S W +Q E GLP+PD ++ E + R G+G ERYE Q +V E
Sbjct: 116 YSAAKNNRELSLEWAWQSEIGLPRPDLWFFLNISPEKAESRGGYGLERYENVTLQLRVGE 175
Query: 182 NYEKLK 187
++ ++
Sbjct: 176 LFKSMQ 181
>gi|290462111|gb|ADD24103.1| Thymidylate kinase [Lepeophtheirus salmonis]
Length = 214
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 124/226 (54%), Gaps = 27/226 (11%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDR-TISTGHIIDEYLR 60
S + RGAFIV EGCDRSGKTT AK+L N +F+ FPDR + TG +I+ +L
Sbjct: 3 TSVLKRGAFIVLEGCDRSGKTTLAKRLSQDPN-----FEFLRFPDRDSKLTGSLINSFLT 57
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
E+ Q HLLFSANRWE+ P + ++ G + DRY++S
Sbjct: 58 GAKEMCGQLIHLLFSANRWEKVPQILSTLDSG-----------------KHIICDRYAYS 100
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
G+A+S++K GM WC + GLP PD +L ++ E +R GFGDE YE+ +FQ KV
Sbjct: 101 GIAYSSSKPGMSFDWCANSDNGLPTPDLILFLDVSPEEALKRGGFGDEVYEKVEFQAKVR 160
Query: 181 ENYEKL---KDNIWIDIDAD-KDIDTLGLIVKDIVIDTIKKSQFSP 222
+ Y K K W + D K +D L ++ ++ DT+ K + SP
Sbjct: 161 DIYSKRLFGKGGEWKWVSTDGKSLDELYTELRTLIEDTLVKERDSP 206
>gi|451993659|gb|EMD86131.1| hypothetical protein COCHEDRAFT_1198102 [Cochliobolus
heterostrophus C5]
gi|451999805|gb|EMD92267.1| hypothetical protein COCHEDRAFT_1173969 [Cochliobolus
heterostrophus C5]
Length = 216
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 124/230 (53%), Gaps = 27/230 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RG IVFEG DR+GK+TQ +KLV L + I + + FPDRT G +I+ YL + +
Sbjct: 1 MARGKLIVFEGLDRAGKSTQCEKLVADLQNDGIKVRHMRFPDRTTPIGQMINSYLSGQSD 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D HLLFSANRWE P++ + G T+ I DRY +SG +
Sbjct: 61 QEDHVIHLLFSANRWETAPSIRANLAAGTTVII-----------------DRYYYSGCVY 103
Query: 125 SAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
SAAK+ M + WC QP+ GLP+PD L ++ + +R GFG E+YE+ D Q +V E
Sbjct: 104 SAAKQNPNMSLEWCRQPDVGLPRPDLCLFLDISADDAAKRGGFGTEKYEKKDMQDRVREL 163
Query: 183 YEKL----KDNIWIDIDADKDIDTLGLIVK---DIVIDTIKKSQFSPLES 225
+E L + ++ IDA ++ + V+ D I+ + K Q PL +
Sbjct: 164 FETLMQKKEGEDFVRIDAGASLEEVAAKVREQADRCIERVAKGQL-PLRT 212
>gi|443897869|dbj|GAC75208.1| thymidylate kinase/adenylate kinase [Pseudozyma antarctica T-34]
Length = 1085
Score = 150 bits (378), Expect = 6e-34, Method: Composition-based stats.
Identities = 82/218 (37%), Positives = 121/218 (55%), Gaps = 37/218 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FIV EG DR+GK+TQ ++L +LN ++ + FP+RT + G +I+ YL + +L
Sbjct: 408 RGFFIVVEGLDRAGKSTQVERLAQHLN-----AKPIKFPERTTAIGQMINSYLAQTSDLD 462
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
DQA HLLFSANRWE + K ++ G + DRY+FSG+A+S
Sbjct: 463 DQAIHLLFSANRWECVAAIHKTLDAG-----------------ESIVCDRYAFSGIAYSV 505
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
+K G+ WC P+ GLP PD L L+ + R G+G+ERYE+ +FQ KV E + ++
Sbjct: 506 SK-GLSYDWCRHPDIGLPLPDLTLFLDLDAQTAAARGGYGEERYEKLEFQAKVREAFGQV 564
Query: 187 KDNI------WIDIDADKDIDTLGLIVKDIVIDTIKKS 218
++ W+ IDA K +D V D I+K+
Sbjct: 565 AQDVKAHGGRWVTIDAGKTLDQ--------VTDDIQKA 594
>gi|340519189|gb|EGR49428.1| predicted protein [Trichoderma reesei QM6a]
Length = 274
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 105/182 (57%), Gaps = 19/182 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIV EG DRSGKTTQ K L + P + + FPDRT G +ID YL+ ++L
Sbjct: 39 RGAFIVLEGLDRSGKTTQVKLLEQRFVEEGRPVKVMRFPDRTTPIGQMIDGYLKSHVDLN 98
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE + ++ GIT+ +DR+ SG+ +SA
Sbjct: 99 DHAIHLLFSANRWEAANQIRAYLDAGITV-----------------VSDRFYHSGIVYSA 141
Query: 127 AKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK+ + ++W P+ GLP+PD VL L+EEA + R G+G E+YE+ + QR V E +
Sbjct: 142 AKKNPHLPLTWARAPDTGLPRPDVVLFLDLDEEAARARGGWGSEKYEKEELQRTVRELFW 201
Query: 185 KL 186
L
Sbjct: 202 AL 203
>gi|358382426|gb|EHK20098.1| hypothetical protein TRIVIDRAFT_77280 [Trichoderma virens Gv29-8]
Length = 264
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 104/182 (57%), Gaps = 19/182 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIV EG DRSGKTTQ K L + P + + FPDRT G +ID YL+ +++
Sbjct: 29 RGAFIVLEGLDRSGKTTQVKLLEQRFVEEGRPVKVMRFPDRTTPIGQMIDGYLKSHVDMS 88
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE + + GIT+ +DR+ SG+ +SA
Sbjct: 89 DHAIHLLFSANRWEAAQQIRAYLAAGITV-----------------VSDRFYHSGIVYSA 131
Query: 127 AKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK+ + ++W P+ GLP+PD VL L+EEA + R G+G E+YE+ + QR V E +
Sbjct: 132 AKKNPHLPLAWARAPDTGLPRPDVVLFLDLDEEAARARGGWGSEKYEKEEMQRTVRELFW 191
Query: 185 KL 186
L
Sbjct: 192 AL 193
>gi|440300143|gb|ELP92632.1| thymidylate kinase, putative [Entamoeba invadens IP1]
Length = 208
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 21/221 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RG +V EG D+ GK++ + + LN I S FPDR+ + G +ID++L K
Sbjct: 1 MSRGILVVLEGIDQCGKSSASVSVCQKLNSEGIKSVTQPFPDRSTAVGKLIDDFLHGK-N 59
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
LP QA HLL+SANRWE + K I +G+T+ DRY+FSG+ +
Sbjct: 60 LPQQAVHLLYSANRWEVAKIIEKNINEGVTV-----------------VCDRYAFSGIVY 102
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENY 183
S A G+D WC P+ GLPKPD V +L+ +EA +RRK +RYE +FQ+KV +
Sbjct: 103 SIA-NGLDPEWCKIPDSGLPKPDIVCFLELSLDEADRRRKSLVADRYENVEFQKKVKSEF 161
Query: 184 EKLKDN-IWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
EK+K+ +W +DA+++ + + +I+ IK+ Q +P+
Sbjct: 162 EKMKNELLWTSVDANQNRKKVVEDICNIIKKNIKEMQSNPI 202
>gi|209882114|ref|XP_002142494.1| thymidylate kinase family protein [Cryptosporidium muris RN66]
gi|209558100|gb|EEA08145.1| thymidylate kinase family protein [Cryptosporidium muris RN66]
Length = 208
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 103/194 (53%), Gaps = 18/194 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IVFEG DRSGKT Q+ KL + NI + FPDR+ + G+++D YLR +
Sbjct: 3 RGALIVFEGTDRSGKTLQSNKLAEKFKNENINCILIGFPDRSTNIGYLLDLYLRNCENMR 62
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ +HLLFSANRWE + +E G+T+ DRY+FSGVA+S
Sbjct: 63 PEVSHLLFSANRWEYFEKIKTYLESGVTV-----------------ICDRYAFSGVAYSV 105
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
DI WC PEKGL PD V + + R GFGDERY+ Q V+ Y +
Sbjct: 106 GALKKDIEWCMMPEKGLISPDIVFFLDADVQIRVDRSGFGDERYDTESTQNSVSTIYSQF 165
Query: 187 KD-NIWIDIDADKD 199
K + W IDA KD
Sbjct: 166 KKYDYWKVIDASKD 179
>gi|336473462|gb|EGO61622.1| hypothetical protein NEUTE1DRAFT_77740 [Neurospora tetrasperma FGSC
2508]
gi|350293248|gb|EGZ74333.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 309
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 104/184 (56%), Gaps = 19/184 (10%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
I RGA IV EG DRSGKTTQ K L D K + + FPDRT G +ID YL+ + +
Sbjct: 21 IARGALIVVEGLDRSGKTTQVKLLEDRFLKAGKKVKTMRFPDRTTPIGQMIDSYLKSQAQ 80
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ D HLLFSANRWE T+T + QG TL + DRY SG+ +
Sbjct: 81 MDDHVIHLLFSANRWEAVKTITSELSQGTTLIL-----------------DRYYHSGIVY 123
Query: 125 SAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
SAAK+ + +SW PE GLP+PD VL L+EE + R G+G E YE+ + QR+V E
Sbjct: 124 SAAKQNPSLSLSWARAPEIGLPRPDLVLFLDLDEEQARLRGGWGHELYEKAEMQRRVREL 183
Query: 183 YEKL 186
+ L
Sbjct: 184 FWGL 187
>gi|340923546|gb|EGS18449.1| thymidylate kinase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 296
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 106/186 (56%), Gaps = 19/186 (10%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+ + RGA IV EG DRSGKTTQ K L + + + FPDRT G IID YL+ +
Sbjct: 38 ASVTRGALIVLEGLDRSGKTTQVKLLEQRFVELGRKVKVMRFPDRTTPIGQIIDSYLKSQ 97
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+++ D HLLFSANRWE T+T L+ GIT+ DRY +SG+
Sbjct: 98 VDIDDHVIHLLFSANRWEAAKTITALLNAGITV-----------------LCDRYYYSGI 140
Query: 123 AFSAAKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
+SAAK+ + ++W PE GLP+PD VL L+EE + R G+G E YE+ + Q++V
Sbjct: 141 VYSAAKQNPTLSLAWARAPEVGLPRPDLVLFLDLDEEQARARGGWGGEAYEKAEMQKRVR 200
Query: 181 ENYEKL 186
E + L
Sbjct: 201 ELFWGL 206
>gi|255955699|ref|XP_002568602.1| Pc21g15930 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590313|emb|CAP96490.1| Pc21g15930 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 223
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 121/216 (56%), Gaps = 23/216 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK++Q + L D L++ +++ FPDRT G +ID YLR
Sbjct: 11 RGALIVVEGLDRAGKSSQCEMLRDSLSRQGHVVKYIRFPDRTTPIGKLIDSYLRGSSHQD 70
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE ++ + I G T+ + DRYS+SGV +SA
Sbjct: 71 DHSIHLLFSANRWEIAKSIEEDIANGTTVIV-----------------DRYSYSGVVYSA 113
Query: 127 AKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK + + W ++PE GLP+PD L ++ E +R GFG ERYE + Q +V E ++
Sbjct: 114 AKANPTLSLEWAWRPEIGLPRPDICLFLSISPEEAAKRGGFGAERYENGEMQTRVRELFQ 173
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
+ + ++ I IDA K I+ + ++ +V D I +
Sbjct: 174 TIFEKQQDVSI-IDAGKSIEEVSQEIRGVVADCIAR 208
>gi|401880710|gb|EJT45028.1| hypothetical protein A1Q1_06612 [Trichosporon asahii var. asahii
CBS 2479]
Length = 214
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 107/186 (57%), Gaps = 18/186 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG DRSGKTTQ +L+ L K ++ FPDRT G +ID YL+ K E
Sbjct: 2 VQRGALIVFEGLDRSGKTTQVDRLIARLQKEGRKARLQKFPDRTTGIGKMIDAYLQSKAE 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ D A HLLFSANRWE ++ ++ G ++ + DRY+FSG+AF
Sbjct: 62 MDDHAIHLLFSANRWECVSSILASLDAGESVVV-----------------DRYAFSGLAF 104
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
SAAK G++ +C P+ GLP PD L L+ E +R +G ERYE + Q++V +
Sbjct: 105 SAAK-GLNFGYCQAPDVGLPLPDLTLYLTLSPEVAAQRGAYGQERYENVELQKEVRRQFA 163
Query: 185 KLKDNI 190
+ D++
Sbjct: 164 AVFDDL 169
>gi|429327425|gb|AFZ79185.1| thymidylate kinase, putative [Babesia equi]
Length = 214
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 117/213 (54%), Gaps = 21/213 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKIEL 65
+G IVFEG DRSGKT+Q K L + L NIP Q + FPDR+ G ++++YL RK E+
Sbjct: 9 KGKLIVFEGIDRSGKTSQIKLLSERLTLENIPHQTIGFPDRSTRIGSLLEDYLKRKDEEM 68
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
P QA HLLFSANRWE + KL+E G + + DRY++SG+++S
Sbjct: 69 PRQALHLLFSANRWENMSRIAKLLESGTHVLL-----------------DRYAYSGISYS 111
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
EG++ WC P+ G+ +PD V ++ + R FGDE YE+ KV + + +
Sbjct: 112 VGAEGLNFDWCKVPDCGIVEPDVVFFMNVSAQNTCTRSSFGDEIYEKVKTLEKVYDVFRR 171
Query: 186 LKDNI--WIDIDADKDIDTLGLIVKDIVIDTIK 216
DN+ W DIDA D + + ++ IK
Sbjct: 172 F-DNLPYWRDIDASDDPSVIHEKIYKTTMEIIK 203
>gi|380795897|gb|AFE69824.1| thymidylate kinase isoform 1, partial [Macaca mulatta]
Length = 196
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 20/208 (9%)
Query: 19 SGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQAAHLLFSANR 78
+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL KK ++ D A HLLFSANR
Sbjct: 1 AGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSDVEDHAVHLLFSANR 60
Query: 79 WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQ 138
WE+ P + + + QG+TL + DRY+FSGVAF+ AKE + WC Q
Sbjct: 61 WEQVPLIKEKLSQGVTLIV-----------------DRYAFSGVAFTGAKENFSLDWCKQ 103
Query: 139 PEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKDNI---WIDID 195
P+ GLPKPD VL +L +R +G ERYE FQ + + + +L + W +D
Sbjct: 104 PDVGLPKPDLVLFLQLQLADAAKRGAYGHERYENRAFQERALQCFHQLMRDTTLNWKMVD 163
Query: 196 ADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
A K I+ + ++ + D I + PL
Sbjct: 164 ASKSIEAVHEDIRVLSEDAIHTATEKPL 191
>gi|121718363|ref|XP_001276187.1| thymidylate kinase [Aspergillus clavatus NRRL 1]
gi|119404385|gb|EAW14761.1| thymidylate kinase [Aspergillus clavatus NRRL 1]
Length = 221
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 118/210 (56%), Gaps = 25/210 (11%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M + RGA IV EG DR+GK++Q ++L D L + +++ FPDRT G +I+ YL+
Sbjct: 1 MGNMQKRGALIVVEGLDRAGKSSQCERLRDSLQASGYSVKYIRFPDRTTPIGQLINGYLQ 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ L D + HLLFSANRWE T+ I G+T+ + DRYS+S
Sbjct: 61 GQSHLDDHSIHLLFSANRWEIARTIENDIANGVTVIV-----------------DRYSYS 103
Query: 121 GVAFSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRK 178
G +SAAK + + + W +QPE GLP+PD L +++ E +R GFG ERYE Q +
Sbjct: 104 GAVYSAAKGNQNLSLEWAWQPEIGLPQPDICLFLRISPEEAAKRGGFGIERYENEKMQSR 163
Query: 179 VAENYE-----KLKDNIWIDIDADKDIDTL 203
V E ++ +L D I + +DA + +D +
Sbjct: 164 VRELFQTLFKLQLGDYIHM-VDAGRTLDAV 192
>gi|367015158|ref|XP_003682078.1| hypothetical protein TDEL_0F00560 [Torulaspora delbrueckii]
gi|359749740|emb|CCE92867.1| hypothetical protein TDEL_0F00560 [Torulaspora delbrueckii]
Length = 176
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 115/190 (60%), Gaps = 24/190 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR-KKI 63
+ RG I+ EG DR+GKTTQ+ L+D L N + + FPDR+ G +ID+YL +
Sbjct: 1 MTRGRLILIEGLDRTGKTTQSNILLDKLKPN---ATLIKFPDRSTEIGQLIDKYLTDRSF 57
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
LPDQA HLLFSANRWE ++ +L+ G H L DRY +SG+A
Sbjct: 58 VLPDQAVHLLFSANRWEVAQSIRELLLAG-----KHVVL------------DRYVYSGIA 100
Query: 124 FSAAK--EGMDISWCFQPEKGLPKPD-AVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
+SAAK GMD +WC QP+KGL KPD + L N Q R+GFGDERYE ++FQ++V
Sbjct: 101 YSAAKGVAGMDRNWCLQPDKGLLKPDLTIFLTNANVCENQSRQGFGDERYEVSEFQQEVK 160
Query: 181 ENYEKLKDNI 190
+ + K+ +++
Sbjct: 161 KQFYKVFEDL 170
>gi|365985734|ref|XP_003669699.1| hypothetical protein NDAI_0D01420 [Naumovozyma dairenensis CBS 421]
gi|343768468|emb|CCD24456.1| hypothetical protein NDAI_0D01420 [Naumovozyma dairenensis CBS 421]
Length = 217
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 123/204 (60%), Gaps = 28/204 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR-KKIEL 65
RG I+ EG DR+GKTTQ L+ L+ + ++ + FPDRT G +ID YL K+ L
Sbjct: 3 RGKLILVEGLDRTGKTTQTTLLLKKLSSQD--AKLIKFPDRTTPIGKLIDNYLTDKEFHL 60
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
PDQA HLLFSANRWE ++ +L+ +G + + DRY +SG+A+S
Sbjct: 61 PDQAVHLLFSANRWEVADSIKQLLLEGKIVIL-----------------DRYVYSGIAYS 103
Query: 126 AAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
AAK GMD+ WC QP+KGL KPD + +F N+ +KGFG+ERYE FQ++V +
Sbjct: 104 AAKNIPGMDLKWCLQPDKGLLKPD-LTIFLTNDNDNDDKKGFGEERYENVQFQKEVKNQF 162
Query: 184 EKLKDNIWIDIDA-DKDIDTLGLI 206
K ++ ++D+ DK+ +TL ++
Sbjct: 163 IK----VFSELDSIDKESETLKIV 182
>gi|342881732|gb|EGU82564.1| hypothetical protein FOXB_06930 [Fusarium oxysporum Fo5176]
Length = 254
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 100/182 (54%), Gaps = 19/182 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIV EG DRSGKTTQ K L + + + FPDRT G +ID YL+ +E+
Sbjct: 23 RGAFIVLEGLDRSGKTTQVKLLEQRFVEEGKKVKVMRFPDRTTPIGQMIDAYLKSDVEMD 82
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE + L+ G T+ DRY SG+ +SA
Sbjct: 83 DHVIHLLFSANRWEAVKQIQSLLASGTTI-----------------VCDRYYHSGIVYSA 125
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK+ + + W PE+GLP+PD VL L EE Q R G+G E YE++D Q++V E +
Sbjct: 126 AKQNPSLTLPWARAPERGLPRPDLVLFLDLTEEQAQARGGWGGEVYERSDMQKRVRELFW 185
Query: 185 KL 186
L
Sbjct: 186 GL 187
>gi|85091013|ref|XP_958694.1| thymidylate kinase [Neurospora crassa OR74A]
gi|12718338|emb|CAC28573.1| related to thymidylate kinase [Neurospora crassa]
gi|28920075|gb|EAA29458.1| thymidylate kinase [Neurospora crassa OR74A]
Length = 309
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 103/184 (55%), Gaps = 19/184 (10%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
I RGA IV EG DRSGKTTQ K L D K + + FPDRT G +ID YL+ + +
Sbjct: 21 IARGALIVIEGLDRSGKTTQVKLLEDRFLKAGKKVKTMRFPDRTTPIGQMIDSYLKSQAQ 80
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ D HLLFSANRWE +T + QG TL + DRY SG+ +
Sbjct: 81 MDDHVIHLLFSANRWEAVKKITSELSQGTTLIL-----------------DRYYHSGIVY 123
Query: 125 SAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
SAAK+ + +SW PE GLP+PD VL L+EE + R G+G E YE+ + QR+V E
Sbjct: 124 SAAKQNPSLSLSWARAPEIGLPRPDLVLFLDLDEEQARLRGGWGHELYEKAEMQRRVREL 183
Query: 183 YEKL 186
+ L
Sbjct: 184 FWGL 187
>gi|259480991|tpe|CBF74121.1| TPA: thymidylate and uridylate kinase (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 223
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 117/216 (54%), Gaps = 25/216 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK++Q K L + L + P +++ FPDRT G +ID YLR + L
Sbjct: 10 RGALIVVEGLDRAGKSSQCKFLHNILQEGGRPVKYIRFPDRTTPIGKLIDGYLRGQSHLD 69
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE ++ I G ++ I DRYS+SG +SA
Sbjct: 70 DHSIHLLFSANRWEVAQSIEADIANGTSVII-----------------DRYSYSGAVYSA 112
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK + + W +QPE GLPKPD L ++ E +R GFG ERYE Q +V E +
Sbjct: 113 AKANPSLSLEWAWQPEVGLPKPDLCLFLSISPEEAAKRGGFGGERYENEAMQTRVRELFN 172
Query: 185 KLKD-----NIWIDIDADKDIDTLGLIVKDIVIDTI 215
+ D +I I IDA K + + + ++V + I
Sbjct: 173 TIFDLQRATDIRI-IDAGKSLAEVSQDILNVVTERI 207
>gi|239788950|dbj|BAH71126.1| ACYPI007604 [Acyrthosiphon pisum]
Length = 131
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 90/141 (63%), Gaps = 17/141 (12%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M RGA IV EGCDRSGKTTQ KLV+ LN IP++ ++FPDR+ G +I++YL
Sbjct: 1 MTKSAMRGALIVLEGCDRSGKTTQCAKLVEALNNMKIPAKKISFPDRSTPIGSLINDYLS 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+KIELPD++ HLLFSANRWE EP + K IE G+TL + DRYS+S
Sbjct: 61 RKIELPDRSVHLLFSANRWELEPEIRKQIESGVTLIV-----------------DRYSYS 103
Query: 121 GVAFSAAKEGMDISWCFQPEK 141
GV F++AK+ +D WC K
Sbjct: 104 GVVFTSAKQCVDFKWCLWARK 124
>gi|40556108|ref|NP_955193.1| CNPV170 thymidylate kinase [Canarypox virus]
gi|40233933|gb|AAR83516.1| CNPV170 thymidylate kinase [Canarypox virus]
Length = 212
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 117/217 (53%), Gaps = 21/217 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RG FIV EG DRSGKT Q +KL+ Y+ + ++ + FP+R G +I+ YL KKI
Sbjct: 1 MQRGMFIVLEGLDRSGKTVQCEKLLQYMLEKGYKTESLKFPNRETEIGKVINSYLEKKIN 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ D+A HLLFSANRWE + + I L + DRY+FSG AF
Sbjct: 61 INDRAIHLLFSANRWELADLIKDKLSHNINLIV-----------------DRYAFSGAAF 103
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK + + WC + GLP PD V+ ++ R+ FG ERYE FQ +V + +
Sbjct: 104 TAAKNNVSLEWCKLTDSGLPLPDLVIFLDISASESSDRENFGMERYETASFQDEVRKRFY 163
Query: 185 KL---KDNI-WIDIDADKDIDTLGLIVKDIVIDTIKK 217
L D+I W IDA K I+ + +K +V D I K
Sbjct: 164 DLIKGTDSINWKVIDATKTIEDIHEEIKLLVEDVIDK 200
>gi|260943900|ref|XP_002616248.1| hypothetical protein CLUG_03489 [Clavispora lusitaniae ATCC 42720]
gi|238849897|gb|EEQ39361.1| hypothetical protein CLUG_03489 [Clavispora lusitaniae ATCC 42720]
Length = 208
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 118/212 (55%), Gaps = 31/212 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKIEL 65
RG I+ EG DRSGK+TQA+ L L+ +Q FPDR+ G +I+EYL +L
Sbjct: 2 RGRLILIEGLDRSGKSTQAENLASALD-----AQLYKFPDRSTPVGKLINEYLVNSSFDL 56
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D+AAHLLFSANRWE + + +G Q DRY +SG+A+S
Sbjct: 57 SDEAAHLLFSANRWEVAHEMEATLLRG-----------------QNIVLDRYIYSGIAYS 99
Query: 126 AAKEGM-DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK + D W + P+KGLPKPD L ++ E L RRKG+GDERYE++ FQ KV + +
Sbjct: 100 LAKSSLNDYEWLYSPDKGLPKPDLTLFLTIDLEELSRRKGWGDERYEKSAFQAKVKQCFM 159
Query: 185 KLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
++ +D +KD + V ++ I+ +K
Sbjct: 160 QI-------LDPEKDSSVEIVNVDNLSIEQVK 184
>gi|422933885|ref|YP_007003944.1| thymidylate kinase [Cyprinid herpesvirus 2]
gi|386686198|gb|AFJ20550.1| thymidylate kinase [Cyprinid herpesvirus 2]
Length = 253
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 123/256 (48%), Gaps = 61/256 (23%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ K LVD L ++ + FPDR+ G +I+ YL K +L
Sbjct: 4 RGALIVLEGVDRAGKSTQCKLLVDALVNQGHCAELLRFPDRSTVLGRVINSYLTNKTDLD 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+AAHLLFSANRWE EP + IE G+TL + DRY+FSG+ F+A
Sbjct: 64 ARAAHLLFSANRWELEPLIRSKIESGVTLVV-----------------DRYAFSGICFTA 106
Query: 127 AK----------------------------------------EGMDISWCFQPEKGLPKP 146
AK E + WC ++GLP+P
Sbjct: 107 AKVCGGGSSSNSKVAPLECVNSKVEQESARALECINSKVEEEESAVLEWCKNSDRGLPRP 166
Query: 147 DAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL---KDNIWIDIDADKDIDTL 203
D VL L A +R G+G ER+E FQ KV + KL +D W +++DK + L
Sbjct: 167 DLVLFLDLETSAAAKRGGYGQERFENEPFQSKVRALFLKLSTEQDINWQVVESDKTKEQL 226
Query: 204 GLIVKDIVIDTIKKSQ 219
+K + +TI S+
Sbjct: 227 HQDIKRLT-ETILNSE 241
>gi|367036341|ref|XP_003648551.1| hypothetical protein THITE_2106135 [Thielavia terrestris NRRL 8126]
gi|346995812|gb|AEO62215.1| hypothetical protein THITE_2106135 [Thielavia terrestris NRRL 8126]
Length = 303
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 102/184 (55%), Gaps = 19/184 (10%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA +V EG DRSGKTTQ K L + + + FPDRT G +ID YLR +++
Sbjct: 50 VARGALVVLEGLDRSGKTTQVKLLEQRFVELGRKVKVMRFPDRTTPIGQMIDSYLRSQVD 109
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ D HLLFSANRWE T+ L+ G+T+ DRY SG+ +
Sbjct: 110 MDDHVIHLLFSANRWEAAKTIASLLTAGVTV-----------------ICDRYYHSGIVY 152
Query: 125 SAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
SAAK+ + +SW PE GLP+PD VL L+E + R G+G E YE+ + QR+V E
Sbjct: 153 SAAKQNPSLTLSWARAPEVGLPRPDLVLFLDLDENQARARGGWGGEAYEKAEMQRRVREL 212
Query: 183 YEKL 186
+ L
Sbjct: 213 FWGL 216
>gi|330803239|ref|XP_003289616.1| thymidylate kinase [Dictyostelium purpureum]
gi|325080317|gb|EGC33878.1| thymidylate kinase [Dictyostelium purpureum]
Length = 192
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 104/167 (62%), Gaps = 19/167 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYL-NKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
RG FI+FEG DR GK+TQ + L +++ N N+P++ + FPDRT G I+++YL+ +
Sbjct: 4 RGLFILFEGADRVGKSTQVQSLTNHISNSRNLPTKSLRFPDRTTPIGQILNQYLQNSTNM 63
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D+A HLLFS+NRWE + ++ +L+ G + + DRYS+SGVA++
Sbjct: 64 DDRALHLLFSSNRWEAKDSILELLNSGTNIVV-----------------DRYSYSGVAYT 106
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ 172
AAK G+D+ WC+ E GLP+PD V ++ E +R +G ERYE+
Sbjct: 107 AAK-GIDVDWCYSCESGLPEPDIVFYLSMSTEDATKRGDYGGERYEK 152
>gi|407925805|gb|EKG18785.1| Thymidylate kinase [Macrophomina phaseolina MS6]
Length = 216
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 119/226 (52%), Gaps = 26/226 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG IVFEG DR+GKTTQ+ +LV L + Q + FPDRT G +I+ YL E
Sbjct: 2 RGKLIVFEGLDRAGKTTQSGRLVTCLQELGQRVQHMRFPDRTTPIGQMINAYLTGASEQE 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE + LI +G T+ I DRY +SG +SA
Sbjct: 62 DHVIHLLFSANRWEAAAKIKSLIAEGTTVVI-----------------DRYYYSGCVYSA 104
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK+ + + W PE GLP+PD V+ ++ E +R GFG E+YE + Q++V E +
Sbjct: 105 AKDNPSLSLEWARHPEVGLPRPDLVIFLDISPEKAAQRGGFGSEKYENSKMQKRVRELFA 164
Query: 185 KLKD-----NIWIDIDADKDIDTLGLIVKDIVIDTIKK--SQFSPL 223
++K ++ +DA + + V++ V++ I+ Q PL
Sbjct: 165 EMKQMQQEGQDFVTVDAGESEAVVARTVEEAVLEVIEHIDEQNGPL 210
>gi|242792112|ref|XP_002481887.1| thymidylate kinase [Talaromyces stipitatus ATCC 10500]
gi|218718475|gb|EED17895.1| thymidylate kinase [Talaromyces stipitatus ATCC 10500]
Length = 238
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 120/217 (55%), Gaps = 25/217 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA +V EG DR+GK++Q + L L N ++++ FPDR+ G ID YLR + +L
Sbjct: 12 RGALVVVEGLDRAGKSSQCELLYKSLLGMNYKAKYIRFPDRSTPIGKQIDSYLRGQSQLD 71
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE ++ + I G T+ + DRYS+SG +SA
Sbjct: 72 DHSIHLLFSANRWELAQSIHEYIANGTTVIV-----------------DRYSYSGAVYSA 114
Query: 127 AKEGMDIS--WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK ++S W +QPE GLP+PD L ++ E +R G+G ERYE Q++V E +
Sbjct: 115 AKGNPNLSLHWAWQPEVGLPRPDLCLFLSISPEEAAKRGGYGVERYETDSMQKRVRELFL 174
Query: 185 KL-----KDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
L D I + IDA + +D + + D V++ +K
Sbjct: 175 SLLDLPHNDEICV-IDAGQSVDEVAQDILDPVLECMK 210
>gi|170097605|ref|XP_001880022.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645425|gb|EDR09673.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 228
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 117/232 (50%), Gaps = 40/232 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
R FIV EG DRSGKTTQ L L I ++ + FPDRT G +ID YLR EL
Sbjct: 2 RAPFIVIEGLDRSGKTTQTSLLHTRLEAEGIQAKLMKFPDRTTVIGQMIDSYLRSDSELD 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE +T+L+E G + DRY+FSG+AFSA
Sbjct: 62 DHVIHLLFSANRWELASYITQLLEAGTPI-----------------ICDRYAFSGIAFSA 104
Query: 127 AK--------EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRK 178
+K + WC P+ GLP PD VL + E + R G+G+ERYE+ + Q +
Sbjct: 105 SKGIPSSTPSPKLPYEWCRSPDIGLPAPDLVLFLDIAPERAKLRGGYGEERYEKEELQAR 164
Query: 179 VAENYEKLKDNI-----------WIDIDADKDIDTLG----LIVKDIVIDTI 215
V +++L + W+ +DA ++ + +V+ +VI+ I
Sbjct: 165 VRGIFQRLGSEMQNETQRPVRPNWVTVDAGRERKVVANEVWSLVEPLVINRI 216
>gi|357519503|ref|XP_003630040.1| Thymidylate kinase [Medicago truncatula]
gi|355524062|gb|AET04516.1| Thymidylate kinase [Medicago truncatula]
Length = 356
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 121/227 (53%), Gaps = 38/227 (16%)
Query: 11 IVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQAA 70
I F DRSGK++Q +LV YL + ++ FPDRT + G +I YL +L D
Sbjct: 139 ITFRCLDRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHTI 198
Query: 71 HLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKEG 130
HLLFSANRWE+ + ++ G TL + DRYS+SGVAFS+AK G
Sbjct: 199 HLLFSANRWEKRSLMETKLKSGTTLIV-----------------DRYSYSGVAFSSAK-G 240
Query: 131 MDISWCFQPEKGLPKPDAV---------------LLFKLNEEALQR---RKGFGDERYEQ 172
+DI W P K L PD V LF L + Q+ R G+GDERYE+
Sbjct: 241 LDIDWF--PRKRLLAPDLVAYLDISPDLMHASLFFLFVLFAHSYQKAAERGGYGDERYEK 298
Query: 173 TDFQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
+FQ+KVAE+Y+ L D W +DA + I+ + +++I + +K+ Q
Sbjct: 299 LEFQQKVAEHYKVLHDASWKIVDACQPIEDVEKQLQEIALACVKQCQ 345
>gi|443924579|gb|ELU43577.1| thymidylate kinase [Rhizoctonia solani AG-1 IA]
Length = 414
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 114/204 (55%), Gaps = 26/204 (12%)
Query: 13 FEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQAAHL 72
G DRSGK+TQ ++V + P + + FPDRT G +ID YL+ K E+ D HL
Sbjct: 204 LTGLDRSGKSTQCARMVSRIEGEGKPVKAIKFPDRTTEIGKLIDAYLQSKAEVDDHTIHL 263
Query: 73 LFSANRWE-REPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKEGM 131
LFSANRWE ++ L+E G T+ DRY++SG+AFSAAK+
Sbjct: 264 LFSANRWELHRSSIKSLLESGTTI-----------------VCDRYAYSGLAFSAAKQKP 306
Query: 132 DIS--WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKDN 189
D+S WC P+ GLP PDA ++ E ++R G+G ERYE + QR V + ++++ +
Sbjct: 307 DLSYEWCLSPDVGLPAPDAAFFLEVAPEVAKQRGGYGQERYENEEMQRAVRQTFQRIGKD 366
Query: 190 I---WIDIDADKDIDTLGLIVKDI 210
+ W +DA++ T G + +D+
Sbjct: 367 VQERWQVVDANR---TQGEVEEDL 387
>gi|302896090|ref|XP_003046925.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727853|gb|EEU41212.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 257
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 102/187 (54%), Gaps = 19/187 (10%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
AS RGAFIV EG DRSGKTTQ K L + + + FPDR+ G +ID YL+
Sbjct: 29 ASTAARGAFIVLEGLDRSGKTTQVKLLEQRFVEEGNKVKVMRFPDRSTPIGQMIDSYLKS 88
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+E+ D HLLFSANRWE + L+ G T+ DRY SG
Sbjct: 89 DVEMDDHVIHLLFSANRWEAVKQIQSLLAAGTTI-----------------VCDRYYHSG 131
Query: 122 VAFSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
+ +SAAK+ + + W PE+GLP+PD VL L EE + R G+G E YE+++ QR+V
Sbjct: 132 IVYSAAKQNPSLTLPWARAPERGLPRPDLVLFLDLTEEQARSRGGWGGEVYERSEMQRRV 191
Query: 180 AENYEKL 186
E + L
Sbjct: 192 RELFWGL 198
>gi|429861336|gb|ELA36027.1| thymidylate kinase [Colletotrichum gloeosporioides Nara gc5]
Length = 261
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 106/186 (56%), Gaps = 19/186 (10%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+ + RGAFIVFEG DRSGKTTQ K L L + ++ + FPDRT TG++ID+YL+
Sbjct: 25 AGVTRGAFIVFEGLDRSGKTTQVKLLEQRLVELGRKTKAMRFPDRTSPTGNMIDQYLKSN 84
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+E+ D HLLFSANRWE + L+ G T+ DRY SG+
Sbjct: 85 LEMEDHVIHLLFSANRWEAVENIKSLLASGTTV-----------------LCDRYYLSGI 127
Query: 123 AFSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
+SAAK+ +++ W PE GLP+PD L L+E + R G+G E YE+ +FQ +V
Sbjct: 128 VYSAAKQNPSLNLHWARAPELGLPRPDLTLFLDLDESVAKERGGWGGEVYEKAEFQGRVR 187
Query: 181 ENYEKL 186
E + L
Sbjct: 188 ELFWGL 193
>gi|425772476|gb|EKV10877.1| hypothetical protein PDIG_53650 [Penicillium digitatum PHI26]
gi|425774908|gb|EKV13199.1| hypothetical protein PDIP_48870 [Penicillium digitatum Pd1]
Length = 230
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 119/216 (55%), Gaps = 23/216 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK++Q + L D L++ +++ FPDRT G +ID YLR
Sbjct: 11 RGALIVVEGLDRAGKSSQCEMLRDSLSRQGRVVKYIRFPDRTTPIGQLIDSYLRGTSHQD 70
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE + K IE+ IT N K + DRYS+SGV +SA
Sbjct: 71 DHSIHLLFSANRWE----IAKSIEEDIT---------NGKTV----IVDRYSYSGVVYSA 113
Query: 127 AKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK + + W +QPE GLP+PD L ++ E +R GFG ERYE Q +V E +
Sbjct: 114 AKANPTLSLEWAWQPEIGLPRPDICLFLSISPEEAAKRGGFGAERYENEAMQTRVRELFR 173
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
+ + ++ I IDA K ID + ++ V I +
Sbjct: 174 VIFEKQHDVSI-IDAGKAIDEVSREIQGAVAGCIAR 208
>gi|310799971|gb|EFQ34864.1| thymidylate kinase [Glomerella graminicola M1.001]
Length = 271
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 99/179 (55%), Gaps = 19/179 (10%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+ + RGAFI FEG DRSGKTTQ K L + + + FPDRT G +ID YL+
Sbjct: 35 AGVVRGAFIAFEGLDRSGKTTQVKLLEQRFVELGKKVKVMRFPDRTTPIGQMIDAYLKSS 94
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+E+ D HLLFSANRWE + L+ G T+ DRY SG+
Sbjct: 95 VEMEDHVIHLLFSANRWEAVKNIQTLLASGTTV-----------------ICDRYYHSGI 137
Query: 123 AFSAAKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
+SAAK+ + + W QPE GLP+PD VL L E + R G+GDE YE+ +FQR+V
Sbjct: 138 VYSAAKQNPHLTLHWARQPELGLPRPDLVLFLDLEEAIARERGGWGDEVYEKAEFQRRV 196
>gi|4974|emb|CAA46698.1| thymidylate kinase [Schizosaccharomyces pombe]
Length = 210
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 107/181 (59%), Gaps = 19/181 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG IV EG DRSGK+TQ + LVD L N + FPDRT + G ID+YL + ++L
Sbjct: 6 RGRLIVIEGLDRSGKSTQCQLLVDKLILNMKRLKLFKFPDRTTAIGKKIDDYLTESVQLN 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
DQ HLLFSANRW EP+ I + + + N C DRY+FSG+AFSA
Sbjct: 66 DQVIHLLFSANRW--EPS------------IYYRANQQRCN----CILDRYAFSGIAFSA 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D WC P++GL +PD V+ ++ R +G+ERYE+ + Q KV +N ++L
Sbjct: 108 AK-GLDWEWCKSPDRGLTRPDLVIFLNVDPRIAATRGQYGEERYEKIEMQEKVLKNLQRL 166
Query: 187 K 187
+
Sbjct: 167 Q 167
>gi|322712668|gb|EFZ04241.1| thymidylate kinase, putative [Metarhizium anisopliae ARSEF 23]
Length = 257
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 104/192 (54%), Gaps = 23/192 (11%)
Query: 1 MASQIP----RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIID 56
MAS P RGAFIV EG DRSGKTTQ K L + + + FPDRT G +ID
Sbjct: 12 MASDTPSTVKRGAFIVLEGLDRSGKTTQVKLLEQRFVEEGKKVRVMRFPDRTTPIGQMID 71
Query: 57 EYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDR 116
YL+ +++ D HLLFSANRWE + L+ G T +DR
Sbjct: 72 AYLKSDVQMEDHVIHLLFSANRWEAVDQIKTLLAAGTT-----------------VISDR 114
Query: 117 YSFSGVAFSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTD 174
+ SG+ +SAAK + +SW PE+GLP+PD VL L+EE + R G+G E YE+ +
Sbjct: 115 FYHSGIVYSAAKLNPSLPLSWARAPERGLPRPDVVLFLDLDEETARARGGWGGELYEKAE 174
Query: 175 FQRKVAENYEKL 186
Q++V E + L
Sbjct: 175 MQKRVRELFWGL 186
>gi|212535132|ref|XP_002147722.1| thymidylate kinase [Talaromyces marneffei ATCC 18224]
gi|210070121|gb|EEA24211.1| thymidylate kinase [Talaromyces marneffei ATCC 18224]
Length = 238
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 25/217 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA +V EG DR+GK++Q + L L N ++++ FPDR+ G ID YLR + +L
Sbjct: 12 RGALVVVEGLDRAGKSSQCELLYKSLLGMNYKAKYIRFPDRSTPIGKQIDSYLRGESQLD 71
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE ++ K I G T+ + DRYS+SG +SA
Sbjct: 72 DHSIHLLFSANRWEVAQSIQKDIADGTTVIV-----------------DRYSYSGAVYSA 114
Query: 127 AKEGMDIS--WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK ++S W +QPE GLP+PD L ++ E +R G+G ERYE Q++V + +
Sbjct: 115 AKGNPNLSLHWAWQPEVGLPRPDLCLFLSISPEEAAKRGGYGVERYETDSMQKRVRDLFL 174
Query: 185 KL-----KDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
L D I + IDA + +D + L + + V++ +K
Sbjct: 175 SLLDLPHNDEICV-IDAGQSVDEVALDILEPVLECMK 210
>gi|388854519|emb|CCF51906.1| related to thymidylate kinase [Ustilago hordei]
Length = 1228
Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 114/203 (56%), Gaps = 29/203 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FIV EG DR+GK+TQ +L ++L ++ + FP+RT + G +I+ YL + +L
Sbjct: 410 RGFFIVVEGLDRAGKSTQVDRLAEHLQ-----AKAIKFPERTTAIGQMINSYLAQTSDLD 464
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
DQA HLLFSANRWE ++ +E G + DRY+FSG+A+S
Sbjct: 465 DQAIHLLFSANRWECVASIKNTLEAG-----------------ESIVCDRYAFSGIAYSV 507
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+ W P+ GLP PD + L+ + R G+G+ERYE+ +FQ KV E + ++
Sbjct: 508 AK-GLSYDWSRNPDVGLPLPDLTMFLDLDAQTAAARGGYGEERYEKLEFQAKVREAFTRV 566
Query: 187 KDNI------WIDIDADKDIDTL 203
++ W+ IDA K +D +
Sbjct: 567 SQDVKSHGARWVTIDASKTLDQV 589
>gi|325558986|gb|ADZ30363.1| thymidylate kinase [Cowpox virus]
Length = 227
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 126/216 (58%), Gaps = 25/216 (11%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+++ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 22 TKMSRGALIVFEGLDKSGKTTQCMNIMESIPSNTI--KYLNFPQRSTVTGKMIDDYLTRK 79
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
D +LLF ANRWE P + + +EQGITL + DRY+FSGV
Sbjct: 80 KTYNDHIVNLLFCANRWEFAPFIQEQLEQGITLIV-----------------DRYAFSGV 122
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
A++AAK G ++ E GLPKPD V+ + + + R G+E YE +FQ+KV +
Sbjct: 123 AYAAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVEFQQKVLQE 179
Query: 183 YEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
Y+K+ D W I ++ + D ++K+IVI+ I
Sbjct: 180 YKKMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 215
>gi|46130830|ref|XP_389146.1| hypothetical protein FG08970.1 [Gibberella zeae PH-1]
Length = 270
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 104/201 (51%), Gaps = 26/201 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIV EG DRSGKTTQ K L + + + FPDRT G +ID YL+ +E+
Sbjct: 23 RGAFIVLEGLDRSGKTTQVKLLEQRFVEEGKKVKVMRFPDRTTPIGQMIDNYLKSNVEMD 82
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE + L+ G T+ DRY SG+ +SA
Sbjct: 83 DHVIHLLFSANRWEAVKQIQSLLASGTTI-----------------LCDRYYHSGIVYSA 125
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK+ + + W PE+GLP+PD VL L EE Q R G+G E YE++ Q++V E +
Sbjct: 126 AKQNPSLTLPWARAPERGLPRPDLVLFLDLTEEQAQARGGWGGEVYERSGMQKRVRELF- 184
Query: 185 KLKDNIWIDIDADKDIDTLGL 205
W KDI GL
Sbjct: 185 ------WGLSMGGKDIAAQGL 199
>gi|408393471|gb|EKJ72735.1| hypothetical protein FPSE_07135 [Fusarium pseudograminearum CS3096]
Length = 254
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 106/201 (52%), Gaps = 26/201 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIV EG DRSGKTTQ K L + + + + FPDRT G +ID YL+ +E+
Sbjct: 23 RGAFIVLEGLDRSGKTTQVKLLEQRFVEESKKVKVMRFPDRTTPIGQMIDNYLKSNVEMD 82
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE + L+ G T+ C DRY SG+ +SA
Sbjct: 83 DHVIHLLFSANRWEAVKQIQSLLASGTTIL---------------C--DRYYHSGIVYSA 125
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK+ + + W PE+GLP+PD VL L EE Q R G+G E YE++ Q++V E +
Sbjct: 126 AKQNPSLTLPWARAPERGLPRPDLVLFLDLTEEQAQARGGWGGEVYERSGMQKRVRELF- 184
Query: 185 KLKDNIWIDIDADKDIDTLGL 205
W KD+ GL
Sbjct: 185 ------WGLSMGGKDVAAQGL 199
>gi|410079302|ref|XP_003957232.1| hypothetical protein KAFR_0D04490 [Kazachstania africana CBS 2517]
gi|372463817|emb|CCF58097.1| hypothetical protein KAFR_0D04490 [Kazachstania africana CBS 2517]
Length = 215
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 113/183 (61%), Gaps = 23/183 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKI 63
+ RG FI+ EG DR+GKTTQ +L + L+ N S+ + FP+R+ G +I+EYL K
Sbjct: 1 MTRGKFILIEGLDRAGKTTQVNRLYERLSPN---SESMKFPERSTQIGGLINEYLTNKSF 57
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
++PDQ HLLFS+NRWER+ + IE+ + + H + DRY +SG+A
Sbjct: 58 QMPDQTIHLLFSSNRWERQ----EYIEKTLVTDKKHIVM------------DRYVYSGIA 101
Query: 124 FSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
+S AKE GMD WCF +KGL +PD + +F +N ++ R+GFG ERYEQ FQ KV E
Sbjct: 102 YSLAKEVDGMDFDWCFGCDKGLIRPD-MTVFLVNSKSNDNREGFGKERYEQKCFQEKVHE 160
Query: 182 NYE 184
++
Sbjct: 161 KFD 163
>gi|403213637|emb|CCK68139.1| hypothetical protein KNAG_0A04670 [Kazachstania naganishii CBS
8797]
Length = 208
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 125/224 (55%), Gaps = 30/224 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR-KKIEL 65
RG I+ EG DR+GKTTQ + L++ L+ N ++ + FP R G IID YL K EL
Sbjct: 3 RGQLILIEGLDRTGKTTQTELLLNNLSPN---AELIKFPQRQTPIGKIIDRYLTDKSYEL 59
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
PDQA HLLFSANRWE ++ + S+L++ K++ DRY FSGVA+S
Sbjct: 60 PDQAIHLLFSANRWE-------------LIDSIKSTLDSGKHV----ILDRYVFSGVAYS 102
Query: 126 AAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
K GMDI WC P+KGL +PD + LF +NE R GFG+ERYE Q+KV + +
Sbjct: 103 VGKNIPGMDIHWCVSPDKGLMRPD-LTLFLVNEMGSDSRAGFGEERYESVGMQQKVRKQF 161
Query: 184 EKLKDNIWIDIDADKDIDTLGLIVKDI-VIDTIKKSQFSPLESN 226
+ + + D + TL + K I ++ + + Q L SN
Sbjct: 162 DLVLKEL-----GDATVKTLNVTGKTIDEVELMIRRQVDNLLSN 200
>gi|50548641|ref|XP_501790.1| YALI0C13354p [Yarrowia lipolytica]
gi|49647657|emb|CAG82100.1| YALI0C13354p [Yarrowia lipolytica CLIB122]
Length = 204
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 105/191 (54%), Gaps = 19/191 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNI-PSQFVNFPDRTISTGHIIDEYLRKKIEL 65
RG FI EG DRSGK+TQ +LV +L + + FPDR+ G II++YL + L
Sbjct: 2 RGRFIAIEGLDRSGKSTQCDRLVAHLTETTGNKTHLFKFPDRSTPMGQIINQYLTSGVAL 61
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
DQA HLLFSANRWER + L+E+G + DRY SG+ ++
Sbjct: 62 SDQAIHLLFSANRWERIEDIKALLEKG-----------------ENVVLDRYYISGIVYT 104
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
AK G++ WC P+ GLP PD L ++ E +R +G+ERYE+ FQ++VA + +
Sbjct: 105 QAK-GLERQWCTNPDLGLPVPDITLFLTVSPEVASQRGAYGEERYEKIAFQKRVAALFHE 163
Query: 186 LKDNIWIDIDA 196
+ I +DA
Sbjct: 164 VAQRNCITVDA 174
>gi|254585257|ref|XP_002498196.1| ZYRO0G04554p [Zygosaccharomyces rouxii]
gi|238941090|emb|CAR29263.1| ZYRO0G04554p [Zygosaccharomyces rouxii]
Length = 218
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 111/191 (58%), Gaps = 26/191 (13%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR-KKI 63
+ RG I+ EG DR+GK+TQA L+D L N ++ V FPDRT G +I+ YL +
Sbjct: 1 MARGLLILVEGLDRTGKSTQASILLDKLKPN---AELVKFPDRTTPIGQLINRYLTDESF 57
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+LPDQ+ HLLFSANRWE + SL+N + DRY +SG+A
Sbjct: 58 QLPDQSIHLLFSANRWE-----------------LSQSLQNTLLSGKHVIMDRYVYSGIA 100
Query: 124 FSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEAL--QRRKGFGDERYEQTDFQRKV 179
+S AK +GMD WC QP+KGL KPD +L F N ++L R+GFG ERYE FQ KV
Sbjct: 101 YSLAKGIDGMDFDWCIQPDKGLIKPD-LLFFLSNRDSLDTASREGFGQERYESLAFQEKV 159
Query: 180 AENYEKLKDNI 190
+ + ++ + +
Sbjct: 160 RDQFYRVLERL 170
>gi|397570925|gb|EJK47533.1| hypothetical protein THAOC_33735, partial [Thalassiosira oceanica]
Length = 335
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 127/257 (49%), Gaps = 58/257 (22%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT------------- 48
AS RGAFI+ EG DR GKTTQ LV +L ++ + FPDRT
Sbjct: 61 ASSPRRGAFILLEGVDRCGKTTQVSLLVKHLLSLSLAATAFRFPDRTTQGRFMYGMGRLS 120
Query: 49 -----------ISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEI 97
++ G +I++YL+ ++ D+A HLLFSANRWE P L + +G +
Sbjct: 121 CACSSNNGNLVLAVGGLINQYLQSSVQTDDRAIHLLFSANRWEAAPKLVDTLARGTNI-- 178
Query: 98 MHSSLENEKNLDQGCTNDRYSFSGVAFSAAKEGMDIS----------WCFQPEKGLPKPD 147
DRY++SGVAF++AK D S WC + GLP PD
Sbjct: 179 ---------------ICDRYAYSGVAFTSAKTAEDRSSMSGGELTLDWCMGGDVGLPAPD 223
Query: 148 AVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKD-------NIWIDIDADKDI 200
AV+ L+++ ++R G+G ERYE+ D Q++V E + +L+ W +DA + I
Sbjct: 224 AVIFLDLSQDEAEKRGGYGGERYEKRDLQKRVRERFRELQAIDEKHGRVPWHVVDAAQSI 283
Query: 201 DTLGLIVKDIVIDTIKK 217
+ + + IV T+KK
Sbjct: 284 EQVTEDLVSIVTKTVKK 300
>gi|389629288|ref|XP_003712297.1| thymidylate kinase [Magnaporthe oryzae 70-15]
gi|351644629|gb|EHA52490.1| thymidylate kinase [Magnaporthe oryzae 70-15]
gi|440470173|gb|ELQ39259.1| thymidylate kinase [Magnaporthe oryzae Y34]
gi|440485569|gb|ELQ65514.1| thymidylate kinase [Magnaporthe oryzae P131]
Length = 240
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 106/186 (56%), Gaps = 27/186 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQA----KKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
RGA IV EG DRSGKTTQ K+ +D L +N + + FPDRT G +ID YL+ +
Sbjct: 12 RGALIVLEGLDRSGKTTQVQLLEKRFLD-LGRN---VKVMRFPDRTTPIGQMIDGYLKSQ 67
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+++ D HLLFSANRWE +T L+ G T+ DRY +SG+
Sbjct: 68 VDMDDHVIHLLFSANRWEAAKQITDLLSAGTTV-----------------LCDRYYYSGM 110
Query: 123 AFSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
+SAAK+ + +SW PE GLP+PD VL L EE + R G+GDE YE+ + QR+V
Sbjct: 111 VYSAAKQNPALPLSWARAPEVGLPRPDLVLFLDLTEEQAKARGGWGDELYERAEMQRRVR 170
Query: 181 ENYEKL 186
E + L
Sbjct: 171 ELFWGL 176
>gi|223996301|ref|XP_002287824.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976940|gb|EED95267.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 276
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 125/242 (51%), Gaps = 38/242 (15%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+Q RGAFI+ EG DR GKTTQ LV +L ++ + FPDR+ G +I+ YL
Sbjct: 31 TQPKRGAFILLEGVDRCGKTTQVSLLVKHLLSLSLATVAYRFPDRSTQVGSLINSYLTSS 90
Query: 63 IE---LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
L D+A HLLFSANRWE +L + + G + DRY++
Sbjct: 91 TPTAPLDDRAIHLLFSANRWEASTSLARTLASGTNI-----------------VCDRYAY 133
Query: 120 SGVAFSAAKEGMD----------ISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER 169
SGVAF++AK D + WC P+ GLP PD V+ L ++ ++R G+G ER
Sbjct: 134 SGVAFTSAKVEEDRGSMSGGELGLEWCIAPDVGLPAPDCVIFLDLEQDEAEKRGGYGGER 193
Query: 170 YEQTDFQRKVAENYEKLKD-------NIWIDIDADKDIDTLGLIVKDIVIDTIKK-SQFS 221
YE+ D Q +V + + +L+ W +DA + I+ + + IV DTI++ + S
Sbjct: 194 YEKRDLQMRVRKRFAELQSLDEQNGRVPWHVVDASQSIEEVTGELVSIVNDTIERVNNGS 253
Query: 222 PL 223
PL
Sbjct: 254 PL 255
>gi|261202488|ref|XP_002628458.1| thymidylate kinase [Ajellomyces dermatitidis SLH14081]
gi|239590555|gb|EEQ73136.1| thymidylate kinase [Ajellomyces dermatitidis SLH14081]
gi|239612282|gb|EEQ89269.1| thymidylate kinase [Ajellomyces dermatitidis ER-3]
Length = 232
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 119/220 (54%), Gaps = 32/220 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ L L ++ ++ FPDRT G +I+ YL L
Sbjct: 12 RGALIVVEGLDRAGKSTQCAILQKTLQEDGHEVKYRRFPDRTTEIGKMINAYLMGNTHLD 71
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE + + I GIT+ I DRYS+SGV +SA
Sbjct: 72 DHAIHLLFSANRWEAATEIQQDISNGITVII-----------------DRYSYSGVVYSA 114
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK+ G+ + W +QPE GLP+PD L ++ E +R G+G ERYE FQ ++ + ++
Sbjct: 115 AKDIPGLSLDWAWQPEIGLPQPDIWLFLNISPEEAAKRGGYGLERYENDTFQSRIRQLFQ 174
Query: 185 KL-----KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
L DN+ I IDA G +++ +D I+ ++
Sbjct: 175 TLIAREDPDNVHI-IDA-------GRTEREVALDVIETAR 206
>gi|50288903|ref|XP_446881.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526190|emb|CAG59814.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 105/184 (57%), Gaps = 23/184 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK-IEL 65
RG I+ EG DR+GKTTQ L + L + FP+R G +I+ YL + +L
Sbjct: 5 RGKLILIEGLDRTGKTTQVDALAERLRGCGLKVVAAKFPNRESEIGQLINRYLTNRDFQL 64
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
PDQA HLLFSANRWE L + + G + + DRY FSGVA+S
Sbjct: 65 PDQAVHLLFSANRWEYIEELKQQLNDGYCVVL-----------------DRYVFSGVAYS 107
Query: 126 AAK--EGMDISWCFQPEKGLPKPDAVLLFKLNE--EALQRRKGFGDERYEQTDFQRKVAE 181
AAK GMD+ WC QP+KGL KPD + LF NE E++ R GFG+ERYE +DFQ KV +
Sbjct: 108 AAKGTPGMDLQWCLQPDKGLLKPD-LTLFLTNEDRESIANRAGFGEERYEDSDFQLKVKQ 166
Query: 182 NYEK 185
+ +
Sbjct: 167 KFHE 170
>gi|358371633|dbj|GAA88240.1| thymidylate kinase [Aspergillus kawachii IFO 4308]
Length = 224
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 122/227 (53%), Gaps = 28/227 (12%)
Query: 1 MASQIP---RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDE 57
MA+Q P RGA IV EG DR+GK++Q + L L + +++ FPDRT G +ID
Sbjct: 1 MAAQAPPARRGALIVVEGLDRAGKSSQCESLHQKLQELGHSVKYIRFPDRTTPIGKLIDS 60
Query: 58 YLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
YLR + +L D + HLLFSANRWE + + I GIT+ + DRY
Sbjct: 61 YLRGQSQLDDHSIHLLFSANRWEIAQAIEEDIAAGITVIV-----------------DRY 103
Query: 118 SFSGVAFSAAKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDF 175
S+SG +SAAK + + W + PE GLP+PD + + + +R GFG ERYE
Sbjct: 104 SYSGAVYSAAKANPTLSLEWAWTPEIGLPQPDLCVFLSIAPDEAAKRGGFGAERYENETM 163
Query: 176 QRKVAENYEKL-----KDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
Q +V E ++ + +I + IDA + + + + ++ V+D I +
Sbjct: 164 QTRVRELFQTIFRVQRSGDIRV-IDAGRSFEAVSVDIEKSVVDCIAR 209
>gi|145505513|ref|XP_001438723.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405895|emb|CAK71326.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 113/199 (56%), Gaps = 26/199 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI EG D+SGK+TQAK L LN ++ V+FPDRT G II +YLR +
Sbjct: 14 RGVFIALEGLDKSGKSTQAKLLSQKLN-----AKKVSFPDRTTQLGLIISDYLRGNKNMS 68
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HLLFSANRWE+ ++ K ++ G + +DRY++SGVAFSA
Sbjct: 69 DEVIHLLFSANRWEQHTSILKQLQDGTNI-----------------VSDRYAYSGVAFSA 111
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK- 185
AK G+ I WC P+ GL +PD E L +R +G E YE + FQ+KV +++
Sbjct: 112 AK-GLPIEWCKAPDAGLIQPDMTFYLTAPIEELSKRGDYGKEIYENSSFQQKVGSFFDQL 170
Query: 186 -LKDNIWIDIDADKDIDTL 203
L++N + IDA K ID +
Sbjct: 171 ALEENFY-KIDALKSIDEI 188
>gi|448089627|ref|XP_004196858.1| Piso0_004086 [Millerozyma farinosa CBS 7064]
gi|448093932|ref|XP_004197889.1| Piso0_004086 [Millerozyma farinosa CBS 7064]
gi|359378280|emb|CCE84539.1| Piso0_004086 [Millerozyma farinosa CBS 7064]
gi|359379311|emb|CCE83508.1| Piso0_004086 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 126/230 (54%), Gaps = 41/230 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPS-QFVNFPDRTISTGHIIDEYLRKKIEL 65
RG I+ EG DRSGK+TQ+ L + +P+ + + FPDR+ G +I++YL K +L
Sbjct: 6 RGKLILIEGLDRSGKSTQSALL-----QRQLPNCELLKFPDRSTRVGSLINDYLTGKTQL 60
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
DQ+AHLLFSANRWE ++ + + QG + + DRY +SG+A+S
Sbjct: 61 SDQSAHLLFSANRWELAKSIEEKLLQGKFIVL-----------------DRYIYSGIAYS 103
Query: 126 AAK---------EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQ 176
AK E + W + P+KGLPKPD L L E L RRKG+G+ERYE +FQ
Sbjct: 104 LAKSLSNDESSPEMKSVEWLYSPDKGLPKPDLTLFLSLPTEELARRKGWGEERYEDVEFQ 163
Query: 177 RKVAENYEKLKDNIWIDIDADKDIDTLGLI-VKDIVIDTIKKSQFSPLES 225
+KV E + ++ +I D L +I V D+ I+ +K + +ES
Sbjct: 164 KKVRECFLRVLQDI--------PQDHLEIINVSDLSIEQVKSHIWEVIES 205
>gi|331220445|ref|XP_003322898.1| thymidylate kinase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309301888|gb|EFP78479.1| thymidylate kinase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 228
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 129/243 (53%), Gaps = 35/243 (14%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MA+ RG+FIVFEG DRSGK+TQ ++L + L + + + FPDRT + G +I+ YL
Sbjct: 1 MANTTQRGSFIVFEGLDRSGKSTQCRRLEEKLKQAGRTVESIRFPDRTTAIGQMINSYLC 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ EL D A HLLF+ANRWE+ + + G T+ DRY+FS
Sbjct: 61 QTSELDDHAIHLLFAANRWEKSADIHTTLRSGTTI-----------------ICDRYAFS 103
Query: 121 GVAFSAAK-------EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQT 173
G AF+AAK E I+ ++GLP PD V+ L +++L R+GFG+ERYE T
Sbjct: 104 GTAFTAAKFSIRTPPEPEPIATLACADRGLPLPDLVIFLTLGDQSLDNREGFGNERYENT 163
Query: 174 DFQRKVAENYEKL---------KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
+ Q +V + ++ + W+++DA I+ + + +V + ++ F P
Sbjct: 164 ELQDEVKRQFTQVVRPYFEEIHGRDRWVNVDATGTIEEVEQRIWHVVDNHLQ--HFVPQS 221
Query: 225 SNK 227
+ K
Sbjct: 222 TGK 224
>gi|366995629|ref|XP_003677578.1| hypothetical protein NCAS_0G03390 [Naumovozyma castellii CBS 4309]
gi|342303447|emb|CCC71226.1| hypothetical protein NCAS_0G03390 [Naumovozyma castellii CBS 4309]
Length = 214
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 101/180 (56%), Gaps = 23/180 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR-KKIEL 65
RG I+ EG DR+GKTTQ L D L N +Q + FPDR+ + G +I++YL K L
Sbjct: 3 RGRLILIEGLDRTGKTTQTSILTDRLKPN---AQLIKFPDRSTTIGKLINQYLTDKNFNL 59
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
P+Q+ HLLFSANRWE + + + G + + DRY +SG+A+S
Sbjct: 60 PNQSVHLLFSANRWEVAENIKETLLNGTNVIL-----------------DRYVYSGIAYS 102
Query: 126 AAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
AAK+ GMD+ WC P+KGL KPD L R GFG+ERYE FQ+KV + +
Sbjct: 103 AAKDVDGMDLQWCLNPDKGLLKPDLTLFLTNESNDDAERDGFGEERYENVQFQKKVKKQF 162
>gi|164658566|ref|XP_001730408.1| hypothetical protein MGL_2203 [Malassezia globosa CBS 7966]
gi|159104304|gb|EDP43194.1| hypothetical protein MGL_2203 [Malassezia globosa CBS 7966]
Length = 520
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 117/225 (52%), Gaps = 27/225 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FIV EG DRSGK+TQ +LV L ++ V FP+RT G +I YL+ + +
Sbjct: 310 RGVFIVVEGLDRSGKSTQVDRLVQTLGPR---ARLVKFPERTTPIGSMIHSYLKNQTDAC 366
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
DQ HLLFSANRWE ++ + + G Q DRY FSG+A++
Sbjct: 367 DQTVHLLFSANRWELLSSIVQSLRDG-----------------QHVICDRYIFSGMAYTH 409
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+D++WC P+ GLP PD L L+E +R +G+ERYE+ FQR V +E +
Sbjct: 410 AK-GLDLAWCTAPDVGLPVPDLTLFLDLDESTATKRAAYGEERYERRAFQRLVRHAFENV 468
Query: 187 KDNI------WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ + W +DA +D + V V + + + + L S
Sbjct: 469 EQLMLRSGARWERLDASGTLDDVWQAVHAQVQEVVSAPRSASLFS 513
>gi|255712129|ref|XP_002552347.1| KLTH0C02728p [Lachancea thermotolerans]
gi|238933726|emb|CAR21909.1| KLTH0C02728p [Lachancea thermotolerans CBS 6340]
Length = 214
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 105/182 (57%), Gaps = 25/182 (13%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR-KKI 63
+ RG I+ EG DR+GK+TQA KL + L + SQ + FPDR+ G +I++YL
Sbjct: 1 MGRGKLILIEGLDRTGKSTQAGKLTERLGPD---SQLIKFPDRSTKIGGLINQYLTDPSF 57
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
LPDQA HLLFSANRWE + L+ +G + DRY +SGVA
Sbjct: 58 LLPDQAIHLLFSANRWEVAEEIKALLLEG-----------------RNVVLDRYVYSGVA 100
Query: 124 FSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
+SAAK GMD+ WC Q + GL KPD L L + + R+GFGDERYE + FQ+KV E
Sbjct: 101 YSAAKGVPGMDLRWCLQSDVGLLKPDLTLF--LTNQGSELRQGFGDERYENSAFQQKVRE 158
Query: 182 NY 183
+
Sbjct: 159 QF 160
>gi|170582308|ref|XP_001896072.1| thymidylate kinase [Brugia malayi]
gi|158596802|gb|EDP35082.1| thymidylate kinase, putative [Brugia malayi]
Length = 213
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 127/216 (58%), Gaps = 23/216 (10%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M S+I RGAFIVFEGCDR+GK+ Q++KLV+ + ++FPDR+ G ID YL+
Sbjct: 1 MGSRI-RGAFIVFEGCDRAGKSLQSRKLVERIKAAGGDVDLISFPDRSSDLGKFIDRYLK 59
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
K++E+ + AHL+F+ANR P + K + +G L + DRY++S
Sbjct: 60 KEVEMDPKEAHLVFAANRQALMPLMMKKLLKGTHLVV-----------------DRYAYS 102
Query: 121 GVAFSAAKEGMDIS--WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRK 178
G+A++ AK +I+ W + G +PD V+ F L+ E Q+R GFGDER++ +FQ K
Sbjct: 103 GIAYTLAKGADNITMEWAKLADMGELRPDCVIYFNLSFEEAQKRSGFGDERFDFGNFQGK 162
Query: 179 VAENYEKLKD---NIWIDIDADKDIDTLGLIVKDIV 211
V++ E+L D ++W +DA ++ + V ++V
Sbjct: 163 VSKVMEQLADEDRDLWKVVDASLTVEEISENVWNLV 198
>gi|430812257|emb|CCJ30319.1| unnamed protein product [Pneumocystis jirovecii]
Length = 215
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 109/200 (54%), Gaps = 24/200 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG D +GKTTQ + L + N+P + FPDR+ G II+ YL +EL
Sbjct: 8 RGALIVIEGPDNAGKTTQCELLANEFLIKNLPVKIQKFPDRSTEIGKIINSYLSGDLELE 67
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE + K +E+G + DRY +SG+AFS
Sbjct: 68 DHAIHLLFSANRWEISEKVRKNLEEGTFV-----------------IADRYIYSGIAFSV 110
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQ---RKVAENY 183
AK G+DI WC PE+GLP PD V+ +++E +R+ +G ERYE Q R + ++
Sbjct: 111 AK-GLDIEWCKAPERGLPLPDCVIYLDVDQEKTSQRQNYGTERYETNVMQENVRSIFKDI 169
Query: 184 EKLKDNI---WIDIDADKDI 200
+ +N+ W I+A I
Sbjct: 170 SEANNNVCCPWYWINASNSI 189
>gi|145242644|ref|XP_001393895.1| thymidylate kinase [Aspergillus niger CBS 513.88]
gi|134078448|emb|CAK40391.1| unnamed protein product [Aspergillus niger]
gi|350640181|gb|EHA28534.1| hypothetical protein ASPNIDRAFT_56895 [Aspergillus niger ATCC 1015]
Length = 224
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 28/227 (12%)
Query: 1 MASQIP---RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDE 57
MA+Q P RGA IV EG DR+GK++Q + L L +++ FPDRT G +ID
Sbjct: 1 MAAQAPAARRGALIVVEGLDRAGKSSQCESLHQKLQDLGHSVKYIRFPDRTTPIGKLIDG 60
Query: 58 YLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
YLR + +L D + HLLFSANRWE + + I GIT+ + DRY
Sbjct: 61 YLRGQSQLDDHSIHLLFSANRWEIARAIEEDIAAGITVIV-----------------DRY 103
Query: 118 SFSGVAFSAAKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDF 175
S+SG +SAAK + + W + PE GLP+PD L + + +R GFG ERYE
Sbjct: 104 SYSGAVYSAAKANPTLSLEWAWTPEIGLPQPDLCLFLSIAPDEAAKRGGFGAERYENETM 163
Query: 176 QRKVAENYEKL-----KDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
Q +V E ++ + +I + IDA + + + + ++ V+D I +
Sbjct: 164 QSRVRELFQTIFRVQRSGDIRV-IDAGRSFEAVSVDIEKSVVDCIAR 209
>gi|448510102|ref|XP_003866278.1| Cdc8 protein [Candida orthopsilosis Co 90-125]
gi|380350616|emb|CCG20838.1| Cdc8 protein [Candida orthopsilosis Co 90-125]
Length = 224
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 108/201 (53%), Gaps = 38/201 (18%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKI 63
+PRG I+ EG DRSGK+TQA L K S+ + FPDR+ S G +I+EYL K+
Sbjct: 1 MPRGQLILIEGLDRSGKSTQASILASKFPK----SKLIKFPDRSTSIGKLINEYLTNKQF 56
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+L DQ+AHLLFSANRWE + L+ QG + + DRY +SG+A
Sbjct: 57 QLSDQSAHLLFSANRWELNKEIIDLLNQGYFVIL-----------------DRYIYSGIA 99
Query: 124 FSAAKEGM----------------DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGD 167
++ AK + W P+KGLPKPD + LN + + RKG+GD
Sbjct: 100 YTLAKHKHTNSTISQEDGTKTNLSSVEWLLSPDKGLPKPDLTMFLTLNMDEISSRKGWGD 159
Query: 168 ERYEQTDFQRKVAENYEKLKD 188
ERYE +FQ +V + + ++ D
Sbjct: 160 ERYEMVEFQSRVKQCFLEILD 180
>gi|240277647|gb|EER41155.1| thymidylate kinase [Ajellomyces capsulatus H143]
gi|325093734|gb|EGC47044.1| thymidylate kinase [Ajellomyces capsulatus H88]
Length = 232
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 102/182 (56%), Gaps = 19/182 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ L L + ++ FPDRT G +I+ YL + +L
Sbjct: 12 RGALIVLEGLDRAGKSTQCASLQKTLQEEGHEVKYRRFPDRTTEIGKLINAYLMQNAQLD 71
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE + + I GIT+ I DRYS+SG +SA
Sbjct: 72 DHSIHLLFSANRWEAAAEIQRDISNGITVII-----------------DRYSYSGAVYSA 114
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK G+ + W +QPE GLP+PD L ++ E +R G+G ERYE FQ ++ + ++
Sbjct: 115 AKNIPGLSLEWAWQPEIGLPQPDIWLFLNISPEEAAKRGGYGMERYENDAFQTRIRQLFQ 174
Query: 185 KL 186
+L
Sbjct: 175 EL 176
>gi|294950385|ref|XP_002786603.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983]
gi|239900895|gb|EER18399.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983]
Length = 233
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 115/211 (54%), Gaps = 20/211 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQF-VNFPDRTISTGHIIDEYLR-KK 62
+ RGAFIV EG DRSGK+TQ +++ + L + + FP R+ + G ++D YLR
Sbjct: 1 MARGAFIVLEGLDRSGKSTQLRRISEALRQRTGKEVVEMGFPRRSSAIGKMLDTYLRDSS 60
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
++ D+A HLLFSANRWE + M S L +++ DRY FSGV
Sbjct: 61 SKMRDEAVHLLFSANRWE-------------AMSEMLSHLAAGRHI----VCDRYIFSGV 103
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
A++A K +D WC + GLPKPD V+ L+ EA +R +G+ERYE+ D Q KV
Sbjct: 104 AYTAMKGTVDFEWCKSVDVGLPKPDLVVFLDLSPEAAAKRGAYGEERYEKEDLQMKVRTM 163
Query: 183 YEKL-KDNIWIDIDADKDIDTLGLIVKDIVI 212
Y K K+ W DAD+ + + V D +
Sbjct: 164 YTKFEKEPFWRIFDADRPAEEVTRTVTDAAV 194
>gi|30519543|emb|CAD90718.1| A51R protein [Cowpox virus]
gi|325557910|gb|ADZ29292.1| thymidylate kinase [Cowpox virus]
gi|325558771|gb|ADZ30149.1| thymidylate kinase [Cowpox virus]
Length = 227
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 125/216 (57%), Gaps = 25/216 (11%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+++ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 22 TKMSRGALIVFEGLDKSGKTTQCMNIMESIPSNTI--KYLNFPQRSTVTGKMIDDYLTRK 79
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
D +LLF ANRWE + + +EQGITL + DRY+FSGV
Sbjct: 80 KTYNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGV 122
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
A++AAK G ++ E GLPKPD V+ + + + R G+E YE +FQ+KV +
Sbjct: 123 AYAAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVEFQQKVLQE 179
Query: 183 YEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
Y+K+ D W I ++ + D ++K+IVI+ I
Sbjct: 180 YKKMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 215
>gi|324512226|gb|ADY45070.1| Thymidylate kinase [Ascaris suum]
Length = 234
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 126/225 (56%), Gaps = 23/225 (10%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEGCDR+GK+TQA+++V + ++ ++FPDR+ G ID+YL+ +E
Sbjct: 2 VKRGALIVFEGCDRAGKSTQAQRMVGRIQARGERAELISFPDRSTDLGKFIDQYLKGNVE 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ + AHL+F+ANR T+ ++ G L + DRY++SG+A+
Sbjct: 62 MEPREAHLVFAANRQALVGTMRNKLQHGTHLIV-----------------DRYTYSGIAY 104
Query: 125 SAAKEGMDIS--WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
+ AK G+D+S W + G+ KPD VL F L + ++R GFGDER E ++Q V +
Sbjct: 105 TLAK-GLDVSLEWAKIHDVGILKPDCVLYFDLLPDEARKRSGFGDERLEAYEYQCTVYKF 163
Query: 183 YEKLKD---NIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
+ L +IW IDA K ID + V +++ + + P+E
Sbjct: 164 MQTLGSENADIWKVIDASKSIDEVSTDVWNLLKPVLDSAAAKPIE 208
>gi|312067737|ref|XP_003136884.1| thymidylate kinase [Loa loa]
gi|307767957|gb|EFO27191.1| thymidylate kinase [Loa loa]
Length = 213
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 119/208 (57%), Gaps = 23/208 (11%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M S++ RGAFIVFEGCDR GK+ Q++KLV+ + ++FPDR+ G ID YL+
Sbjct: 1 MGSRV-RGAFIVFEGCDRVGKSLQSRKLVERIKATGGNVDLISFPDRSSDLGKFIDRYLK 59
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
K++E+ + AHL+F+ANR P + K + +G L + DRY++S
Sbjct: 60 KEVEMEPKEAHLVFAANRQALMPLMVKELLKGTHLVV-----------------DRYAYS 102
Query: 121 GVAFSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRK 178
G+A++ AK + + + W + G KPD V+ F L+ E Q+R GFGDER++ FQ K
Sbjct: 103 GIAYTLAKGADNVTMEWAKLADMGELKPDCVIYFNLSFEEAQKRSGFGDERFDSGSFQGK 162
Query: 179 VAENYEKLKD---NIWIDIDADKDIDTL 203
V + EKL ++W +DA I+ +
Sbjct: 163 VNDIMEKLAAEDRDLWKVVDASLPIEVI 190
>gi|400599405|gb|EJP67102.1| thymidylate kinase [Beauveria bassiana ARSEF 2860]
Length = 237
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 102/190 (53%), Gaps = 19/190 (10%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
A++ RGAFIV EG DRSGKTTQ K L + + + FPDRT G +ID YL+
Sbjct: 9 AAKPQRGAFIVLEGLDRSGKTTQVKLLEQKFIEQGRLVKLMRFPDRTTPVGQMIDSYLKS 68
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+ + D A HLLFSANRWE + L+E G + DRY+ SG
Sbjct: 69 AVRMDDHAIHLLFSANRWEAAEEIKSLLESGTNI-----------------VCDRYTHSG 111
Query: 122 VAFSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
+ +SAAK G+ + W P+ GLP+PD V+ L+E + R G+GDE YE+ QR+V
Sbjct: 112 MVYSAAKGLPGLRLPWARAPDVGLPRPDRVVFLDLDETTARARGGWGDEVYEKAAMQRQV 171
Query: 180 AENYEKLKDN 189
+ L +
Sbjct: 172 RRLFGALANG 181
>gi|440632592|gb|ELR02511.1| thymidylate kinase [Geomyces destructans 20631-21]
Length = 229
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 100/185 (54%), Gaps = 19/185 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FIV EG DRSGKTTQ K++ L + FPDRT G +I+ YL+ K +L
Sbjct: 9 RGPFIVVEGLDRSGKTTQTKRIEAALVGEGYKVKLRRFPDRTTVIGEMINNYLQSKSDLE 68
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE + K I G T+ DRY +SGV +SA
Sbjct: 69 DHVIHLLFSANRWELAKQIEKDIADGYTV-----------------ICDRYYYSGVVYSA 111
Query: 127 AKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK + + W +PE GLP+PD V+ L E + R G+GDE+YE+ + Q KV + +
Sbjct: 112 AKSNPQLSLPWAREPEVGLPRPDLVIFLDLEPEVAEERGGYGDEKYEKREMQEKVRKLFH 171
Query: 185 KLKDN 189
L D+
Sbjct: 172 ALNDS 176
>gi|402592409|gb|EJW86338.1| thymidylate kinase [Wuchereria bancrofti]
Length = 213
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 122/208 (58%), Gaps = 23/208 (11%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M S++ RGAFIVFEGCDR+GK+ Q++KLV+ + ++FPDR+ G ID YL+
Sbjct: 1 MGSRV-RGAFIVFEGCDRAGKSLQSRKLVERIKAAGGDVDLISFPDRSSDLGKFIDRYLK 59
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
K++E+ + AHL+F+ANR P + K + +G L + DRY++S
Sbjct: 60 KEVEMDPKEAHLVFAANRQALMPLMMKKLLKGTHLVV-----------------DRYAYS 102
Query: 121 GVAFSAAKEGMDIS--WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRK 178
G+A++ AK +I+ W + G +PD V+ F L+ E Q+R GFGDER++ DFQ K
Sbjct: 103 GIAYTLAKGADNITMEWAKLADMGELRPDCVIYFNLSFEEAQKRSGFGDERFDFGDFQGK 162
Query: 179 VAENYEKLKD---NIWIDIDADKDIDTL 203
V++ E+L ++W +DA ++ +
Sbjct: 163 VSKIMEQLAAEDRDLWKIVDASLTVEEI 190
>gi|325558554|gb|ADZ29933.1| thymidylate kinase [Cowpox virus]
Length = 227
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 124/216 (57%), Gaps = 25/216 (11%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+++ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 22 TKMSRGALIVFEGLDKSGKTTQCMNIMESIPSNTI--KYLNFPQRSTVTGKMIDDYLTRK 79
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
D +LLF ANRWE + + +EQGITL + DRY+FSGV
Sbjct: 80 KTYNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGV 122
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
A++AAK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV +
Sbjct: 123 AYAAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVTFQQKVLQE 179
Query: 183 YEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
Y+K+ D W I ++ D D ++K+IVI+ +
Sbjct: 180 YKKMIEEGDIHWQIISSEFDEDVKKELIKNIVIEAM 215
>gi|256076848|ref|XP_002574721.1| thymidylate kinase [Schistosoma mansoni]
gi|353230555|emb|CCD76972.1| thymidylate kinase [Schistosoma mansoni]
Length = 235
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 117/210 (55%), Gaps = 22/210 (10%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNK-NNIPSQFVNFPDRTISTGHIIDEYL 59
M ++ +G F+V EG DR GKTTQA L L++ + V FPDR GH +D YL
Sbjct: 1 MTRRMSQGIFVVLEGADRVGKTTQASLLAKALSEITQRETLSVKFPDRDTPLGHHLDSYL 60
Query: 60 RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
++ A HLLF+ANRWER+ + K I GI + DRY +
Sbjct: 61 SGIGDINKHALHLLFTANRWERQAEIRKAISNGIPV-----------------VADRYIY 103
Query: 120 SGVAFSAAKE--GMDISWCFQPEKGLPKPDAVL-LFKLNEEALQRRKGFGDERYEQTDFQ 176
SG+A++AAK + WC++ EKGL +PD V+ L N + L R G+G ERYE DFQ
Sbjct: 104 SGIAYTAAKAPPTPNWEWCWEMEKGLVEPDLVICLTPGNLDELSSRNGYGKERYENDDFQ 163
Query: 177 RKVAENYEKLKDNIWID-IDADKDIDTLGL 205
++V ENY ++ ++ +D D D + D++GL
Sbjct: 164 KRVLENYVRISKDVELDNKDNDDETDSVGL 193
>gi|449266948|gb|EMC77926.1| Thymidylate kinase, partial [Columba livia]
Length = 169
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 103/181 (56%), Gaps = 20/181 (11%)
Query: 46 DRTISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENE 105
+RT G +I YL K+ L D HLLFSANRWE P + + + QGITL +
Sbjct: 1 ERTTEIGQLISSYLLKEKNLEDHTVHLLFSANRWEHVPLMKEKLHQGITLVV-------- 52
Query: 106 KNLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGF 165
DRY+FSGVAF++AKE + WC QP+ GLPKPD +L +L+ E R F
Sbjct: 53 ---------DRYAFSGVAFTSAKENFCLDWCKQPDVGLPKPDLILFLQLSPEEAAERGNF 103
Query: 166 GDERYEQTDFQRKVAENYEKL-KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSP 222
G+ERYE + FQ KV ++Y L KD W ++A K I+ L +K I +T+++ Q P
Sbjct: 104 GNERYENSSFQEKVLQSYYHLMKDKTLNWKTMNASKGIEDLHREIKSIAEETMREVQNKP 163
Query: 223 L 223
L
Sbjct: 164 L 164
>gi|225557103|gb|EEH05390.1| thymidylate kinase [Ajellomyces capsulatus G186AR]
Length = 232
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 102/182 (56%), Gaps = 19/182 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ L L + ++ FPDRT G +I+ YL + +L
Sbjct: 12 RGALIVLEGLDRAGKSTQCAFLQKTLQEEGHEVKYRRFPDRTTEIGKLINAYLMQNAQLD 71
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE + + I GIT+ I DRYS+SG +SA
Sbjct: 72 DHSIHLLFSANRWEAAAEIQRDISNGITVII-----------------DRYSYSGAVYSA 114
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK G+ + W +QPE GLP+PD L ++ E +R G+G ERYE FQ ++ + ++
Sbjct: 115 AKNIPGLSLEWAWQPEIGLPQPDIWLFLNISPEEAAKRGGYGMERYENDAFQTRIRQLFQ 174
Query: 185 KL 186
+L
Sbjct: 175 EL 176
>gi|171676382|ref|XP_001903144.1| hypothetical protein [Podospora anserina S mat+]
gi|170936257|emb|CAP60916.1| unnamed protein product [Podospora anserina S mat+]
Length = 274
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 99/182 (54%), Gaps = 19/182 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DRSGKTTQ K L + + + FPDRT G +I+ YL + +
Sbjct: 13 RGALIVLEGLDRSGKTTQVKLLEQRFVELGKSVKVMRFPDRTTPIGQMINSYLTSQTTMS 72
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE +T L+ G T+ DRY +SG+ +SA
Sbjct: 73 DHVIHLLFSANRWEAASLITSLLSHGTTV-----------------ICDRYYYSGIVYSA 115
Query: 127 AKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK + +SW PE GLP+PD VL L+E+ ++R G+G E YE+ + QR+V E +
Sbjct: 116 AKHNPFLPLSWARSPEVGLPRPDLVLFLDLDEQEAKKRGGWGGEVYEKAEMQRRVRELFW 175
Query: 185 KL 186
L
Sbjct: 176 GL 177
>gi|56404583|sp|Q80DS7.2|KTHY_CWPXG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
Length = 204
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 123/214 (57%), Gaps = 25/214 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPSNTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRY+FSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G ++ E GLPKPD V+ + + + R G+E YE +FQ+KV + Y+
Sbjct: 102 AAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVEFQQKVLQEYK 158
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ D W I ++ + D ++K+IVI+ I
Sbjct: 159 KMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 192
>gi|90660407|gb|ABD97521.1| thymidylate kinase [Cowpox virus]
Length = 227
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 124/216 (57%), Gaps = 25/216 (11%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+++ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 22 TKMSRGALIVFEGLDKSGKTTQCMNIMESIPSNTI--KYLNFPQRSTVTGKMIDDYLTRK 79
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
D +LLF ANRWE + + +EQGITL + DRY+FSGV
Sbjct: 80 KTYNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGV 122
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
A++AAK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV +
Sbjct: 123 AYAAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVTFQQKVLQE 179
Query: 183 YEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
Y+K+ D W I ++ + D ++K+IVI+ I
Sbjct: 180 YKKMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 215
>gi|20178547|ref|NP_619968.1| CPXV186 protein [Cowpox virus]
gi|20153165|gb|AAM13626.1|AF482758_177 CPXV186 protein [Cowpox virus]
gi|325559411|gb|ADZ30786.1| thymidylate kinase [Cowpox virus]
Length = 227
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 124/216 (57%), Gaps = 25/216 (11%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+++ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 22 TKMSRGALIVFEGLDKSGKTTQCMNIMESIPSNTI--KYLNFPQRSTVTGKMIDDYLTRK 79
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
D +LLF ANRWE + + +EQGITL + DRY+FSGV
Sbjct: 80 KTYNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGV 122
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
A++AAK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV +
Sbjct: 123 AYAAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVAFQQKVLQE 179
Query: 183 YEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
Y+K+ D W I ++ + D ++K+IVI+ I
Sbjct: 180 YKKMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 215
>gi|268529284|ref|XP_002629768.1| Hypothetical protein CBG01006 [Caenorhabditis briggsae]
Length = 213
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 113/192 (58%), Gaps = 19/192 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IVFEG DRSGK+TQA++LV+ + + + FPDR G +ID YLR +I++
Sbjct: 11 RGALIVFEGLDRSGKSTQAQRLVEKIINSGRMAVLQAFPDRQSPVGEMIDRYLRGEIDMD 70
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ A HLLFSA+R+ ++ + + I QG+ D C DRY +SGV++S
Sbjct: 71 EHALHLLFSADRFLKKKMIKQHIAQGV---------------DVVC--DRYCYSGVSYSL 113
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+ W ++GLPKPD VL F+++ E R GFG+ER E Q +VA+ L
Sbjct: 114 AK-GLPEDWVRVTDQGLPKPDIVLFFQVSPEVAASRGGFGNERLETAQLQAEVAKVMPTL 172
Query: 187 KDN-IWIDIDAD 197
+D+ W ++AD
Sbjct: 173 RDDAFWKSVNAD 184
>gi|325514185|gb|ADZ24179.1| thymidylate kinase [Cowpox virus]
Length = 204
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 123/214 (57%), Gaps = 25/214 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPANTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRYSFSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYSFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G ++ E GLPKPD V+ + + + R G+E YE +FQ+KV + Y+
Sbjct: 102 AAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVEFQQKVLQEYK 158
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ D W I ++ + D ++K+IVI+ +
Sbjct: 159 KMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAM 192
>gi|66275971|ref|YP_233056.1| thymidylate kinase [Vaccinia virus]
gi|29692280|gb|AAO89453.1| thymidylate kinase [Vaccinia virus WR]
gi|37551619|gb|AAQ93271.1| thymidylate kinase [Vaccinia virus]
gi|88854248|gb|ABD52666.1| thymidylate kinase TMK [Vaccinia virus]
gi|90819834|gb|ABD98644.1| VACV-DUKE-182 [Vaccinia virus]
Length = 227
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 124/216 (57%), Gaps = 25/216 (11%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+++ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 22 TKMSRGALIVFEGLDKSGKTTQCMNIMESIPANTI--KYLNFPQRSTVTGKMIDDYLTRK 79
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
D +LLF ANRWE + + +EQGITL + DRY+FSGV
Sbjct: 80 KTYNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGV 122
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
A++AAK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV +
Sbjct: 123 AYAAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVTFQQKVLQE 179
Query: 183 YEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
Y+K+ D W I ++ + D ++K+IVI+ I
Sbjct: 180 YKKMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 215
>gi|344302122|gb|EGW32427.1| hypothetical protein SPAPADRAFT_138291 [Spathaspora passalidarum
NRRL Y-27907]
Length = 221
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 129/240 (53%), Gaps = 41/240 (17%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKI 63
+PRG I+ EG DRSGK+TQA YL PS+ + FPDRT G +I+EYL K
Sbjct: 1 MPRGQLILIEGLDRSGKSTQA----SYLTSKLSPSKLIKFPDRTTPIGKLINEYLTNKSF 56
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
L DQ+AHLLFSANRWE + L+ QG + + DRY +SG+A
Sbjct: 57 ALNDQSAHLLFSANRWELNEEIHSLLNQGYFIVL-----------------DRYIYSGLA 99
Query: 124 FSAAK-----EGM----------DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDE 168
++ AK EG+ DI W P+KGLPKPD L L+ + + +RKGFGDE
Sbjct: 100 YTLAKHDFQGEGVSSGGSKKQLGDIDWLLGPDKGLPKPDLTLFLTLDLQEISKRKGFGDE 159
Query: 169 RYEQTDFQRKVAENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQF-SPLE 224
RYE FQ +V + + K+ +DN+ I K I+ + + ++++ K Q +P+E
Sbjct: 160 RYEMEQFQARVKQCFLKVLPKEDNVQIVDVGGKTIEQVSEELWNLIVSKSKHIQTNNPIE 219
>gi|301775533|ref|XP_002923194.1| PREDICTED: thymidylate kinase-like [Ailuropoda melanoleuca]
Length = 204
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 105/194 (54%), Gaps = 20/194 (10%)
Query: 33 NKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQG 92
N N ++ + FP+R+ G ++ YL KK E+ D + HLLFSANRWE+ P + K + QG
Sbjct: 23 NPNXAGAELLRFPERSTEIGKLLSSYLEKKSEVEDHSVHLLFSANRWEQVPLIKKKLSQG 82
Query: 93 ITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLF 152
ITL + DRY+FSGVAF++AKE + WC QP+ GLPKPD V+
Sbjct: 83 ITLVV-----------------DRYAFSGVAFTSAKENFSLDWCKQPDVGLPKPDLVVFL 125
Query: 153 KLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKDN---IWIDIDADKDIDTLGLIVKD 209
+L RR FG ERYE +FQ + + +L + W +DA K I+ + +
Sbjct: 126 QLRLAEAARRGEFGRERYENGNFQERALHRFHQLMADETLNWKMVDASKSIEDVHKEIHA 185
Query: 210 IVIDTIKKSQFSPL 223
+ + I+ + PL
Sbjct: 186 LSVGAIQAAAQRPL 199
>gi|62288454|gb|AAX78482.1| unknown [synthetic construct]
Length = 253
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 124/216 (57%), Gaps = 25/216 (11%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+++ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 48 TKMSRGALIVFEGLDKSGKTTQCMNIMESIPANTI--KYLNFPQRSTVTGKMIDDYLTRK 105
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
D +LLF ANRWE + + +EQGITL + DRY+FSGV
Sbjct: 106 KTYNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGV 148
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
A++AAK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV +
Sbjct: 149 AYAAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINR--NVGEEIYEDVTFQQKVLQE 205
Query: 183 YEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
Y+K+ D W I ++ + D ++K+IVI+ I
Sbjct: 206 YKKMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 241
>gi|325558124|gb|ADZ29505.1| thymidylate kinase [Cowpox virus]
Length = 227
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 123/215 (57%), Gaps = 25/215 (11%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI 63
++ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 23 KMSRGALIVFEGLDKSGKTTQCMNIMESMPSNTI--KYLNFPQRSTVTGKMIDDYLTRKK 80
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
D +LLF ANRWE + + +EQGITL + DRY+FSGVA
Sbjct: 81 TYNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVA 123
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
++AAK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV + Y
Sbjct: 124 YAAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVTFQQKVLQEY 180
Query: 184 EKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
+K+ D W I ++ + D ++K+IVI+ I
Sbjct: 181 KKMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 215
>gi|154285394|ref|XP_001543492.1| hypothetical protein HCAG_00538 [Ajellomyces capsulatus NAm1]
gi|150407133|gb|EDN02674.1| hypothetical protein HCAG_00538 [Ajellomyces capsulatus NAm1]
Length = 232
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 102/182 (56%), Gaps = 19/182 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ L L + ++ FPDRT G +I+ YL + +L
Sbjct: 12 RGALIVLEGLDRAGKSTQCAFLQKTLQEEGHEVKYRRFPDRTTEIGKLINGYLMQNAQLD 71
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE + + I GIT+ I DRYS+SG +SA
Sbjct: 72 DHSIHLLFSANRWEAAAEIQRDISNGITVII-----------------DRYSYSGAVYSA 114
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK G+ + W +QPE GLP+PD L ++ E +R G+G ERYE FQ ++ + ++
Sbjct: 115 AKNIPGLSLEWAWQPEIGLPQPDIWLFLNISPEEAAKRGGYGMERYENDAFQTRIRQLFQ 174
Query: 185 KL 186
+L
Sbjct: 175 EL 176
>gi|346980090|gb|EGY23542.1| thymidylate kinase [Verticillium dahliae VdLs.17]
Length = 285
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 100/186 (53%), Gaps = 19/186 (10%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
S I RGA ++ EG DRSGKTTQ K L + + + FPDR+ G +ID YL+
Sbjct: 48 SAITRGALVILEGLDRSGKTTQVKLLEQRFVELGKKVKVMRFPDRSTPIGQMIDAYLKSS 107
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+E+ D HLLFSANRWE T+ +L+ G T+ DRY SG+
Sbjct: 108 VEMDDHVIHLLFSANRWEAVKTIRQLLASGTTI-----------------LCDRYYHSGI 150
Query: 123 AFSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
+SAAK + + W P+ GLP+PD VL L+E + R G+G E YE+ + QR+V
Sbjct: 151 VYSAAKHNPSLSLHWARAPDIGLPRPDLVLFLDLDEATAKSRGGWGGEVYERGEMQRRVR 210
Query: 181 ENYEKL 186
E + L
Sbjct: 211 ELFWGL 216
>gi|22164753|ref|NP_671666.1| EVM147 [Ectromelia virus]
gi|22123894|gb|AAM92452.1|AF523264_148 EVM147 [Ectromelia virus]
gi|383866872|gb|AFH54715.1| thymidylate kinase [Ectromelia virus]
Length = 227
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 25/216 (11%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+++ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 22 TKMSRGALIVFEGLDKSGKTTQCMNIMESIPSNTI--KYLNFPQRSTVTGKMIDDYLTRK 79
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
D +LLF ANRWE + + +EQGITL + DRY+FSGV
Sbjct: 80 KTYNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGV 122
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
A++AAK G ++ E GLPKPD V+ + + + R G+E YE +FQ+KV +
Sbjct: 123 AYAAAK-GAPMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVEFQQKVLQE 179
Query: 183 YEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
Y+K+ D W I ++ + D ++K+IVI+ +
Sbjct: 180 YKKMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAM 215
>gi|302410089|ref|XP_003002878.1| thymidylate kinase [Verticillium albo-atrum VaMs.102]
gi|261357902|gb|EEY20330.1| thymidylate kinase [Verticillium albo-atrum VaMs.102]
Length = 285
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 100/186 (53%), Gaps = 19/186 (10%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
S I RGA ++ EG DRSGKTTQ K L + + + FPDR+ G +ID YL+
Sbjct: 48 SAITRGALVILEGLDRSGKTTQVKLLEQRFVELGKKVKVMRFPDRSTPIGQMIDAYLKSS 107
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+E+ D HLLFSANRWE T+ +L+ G T+ DRY SG+
Sbjct: 108 VEMDDHVIHLLFSANRWEAVKTIRQLLASGTTV-----------------LCDRYYHSGI 150
Query: 123 AFSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
+SAAK + + W P+ GLP+PD VL L+E + R G+G E YE+ + QR+V
Sbjct: 151 VYSAAKHNPSLSLHWARAPDVGLPRPDLVLFLDLDEATAKSRGGWGGELYERGEMQRRVR 210
Query: 181 ENYEKL 186
E + L
Sbjct: 211 ELFWGL 216
>gi|56404530|sp|Q6RZD4.1|KTHY_RABPU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|44971520|gb|AAS49870.1| RPXV157 [Rabbitpox virus]
gi|167412703|gb|ABZ80137.1| thymidylate kinase [Vaccinia virus GLV-1h68]
Length = 204
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 122/214 (57%), Gaps = 25/214 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPSNTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRY+FSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV + Y+
Sbjct: 102 AAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVTFQQKVLQEYK 158
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ D W I ++ + D ++K+IVI+ I
Sbjct: 159 KMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 192
>gi|378727720|gb|EHY54179.1| thymidylate kinase [Exophiala dermatitidis NIH/UT8656]
Length = 226
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 104/183 (56%), Gaps = 19/183 (10%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
PRG +V EG DRSGK++Q ++L D L +++V FPDRT TG +I+ YL +++
Sbjct: 9 PRGLLVVIEGLDRSGKSSQCQQLFDSLQSQGKRARYVKFPDRTTPTGQMINSYLTGQVQQ 68
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D + HLLFSANRWE ++ + G+T+ + DRYSFSG +S
Sbjct: 69 DDHSIHLLFSANRWEAIRSIHNDLLAGVTVIV-----------------DRYSFSGAVYS 111
Query: 126 AAKEGMDIS--WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
AAKE D++ W + PE GL KPD + ++ +R+G+G ERYE Q +V +
Sbjct: 112 AAKENPDLTLDWAWNPEIGLLKPDVLFFLDISAADAAKRRGYGAERYETEKMQARVRTLF 171
Query: 184 EKL 186
++L
Sbjct: 172 QEL 174
>gi|18640403|ref|NP_570559.1| CMLV169 [Camelpox virus]
gi|18483079|gb|AAL73876.1|AF438165_166 thymidylate kinase [Camelpox virus M-96]
Length = 227
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 125/218 (57%), Gaps = 25/218 (11%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M +++ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL
Sbjct: 20 MFTKMSRGALIVFEGLDKSGKTTQCMNIMESILANTI--KYLNFPQRSTVTGKMIDDYLT 77
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+K D +LLF ANRWE + + +EQGITL + DRY+FS
Sbjct: 78 RKKTYNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFS 120
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GVA++AAK G ++ E GLPKPD V+ L + + K G+E YE FQ+KV
Sbjct: 121 GVAYAAAK-GASMTLSKSYEFGLPKPDLVIF--LESGSKEINKNVGEEIYEDVAFQQKVL 177
Query: 181 ENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
+ Y+K+ D W I ++ + D ++K+IVI+ I
Sbjct: 178 QEYKKMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 215
>gi|56713570|gb|AAW23610.1| thymidylate kinase [Vaccinia virus]
gi|56713854|gb|AAW23892.1| thymidylate kinase [Vaccinia virus]
Length = 204
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 122/214 (57%), Gaps = 25/214 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESILSNTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRY+FSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV + Y+
Sbjct: 102 AAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVTFQQKVLQEYK 158
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ D W I ++ + D ++K+IVI+ I
Sbjct: 159 KMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 192
>gi|56404550|sp|Q76RA8.1|KTHY_VACCA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|56404558|sp|Q77TG7.1|KTHY_VACCT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|56405064|sp|P68693.1|KTHY_VACCC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|56405065|sp|Q80HT9.2|KTHY_VACCV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|209870290|pdb|2V54|A Chain A, Crystal Structure Of Vaccinia Virus Thymidylate Kinase
Bound To Tdp
gi|209870291|pdb|2V54|B Chain B, Crystal Structure Of Vaccinia Virus Thymidylate Kinase
Bound To Tdp
gi|209870294|pdb|2W0S|A Chain A, Crystal Structure Of Vaccinia Virus Thymidylate Kinase
Bound To Brivudin-5'-Monophosphate
gi|209870295|pdb|2W0S|B Chain B, Crystal Structure Of Vaccinia Virus Thymidylate Kinase
Bound To Brivudin-5'-Monophosphate
gi|62232|emb|CAA34345.1| unnamed protein product [Vaccinia virus]
gi|222737|dbj|BAA01822.1| 23.2K protein [Vaccinia virus]
gi|335528|gb|AAA48180.1| putative A48R [Vaccinia virus Copenhagen]
gi|2772800|gb|AAB96539.1| thymidylate kinase [Vaccinia virus]
gi|6969848|gb|AAF34060.1| TA59R [Vaccinia virus Tian Tan]
gi|38349040|gb|AAR18016.1| thymidylate kinase [Vaccinia virus]
gi|47088489|gb|AAT10559.1| thymidylate kinase [Vaccinia virus]
gi|111184359|gb|ABH08279.1| HSPV170 [Horsepox virus]
gi|373447361|gb|AEY72747.1| thymidylate kinase [Vaccinia virus]
gi|373447600|gb|AEY72985.1| thymidylate kinase [Vaccinia virus]
gi|373447836|gb|AEY73220.1| thymidylate kinase [Vaccinia virus]
gi|373448079|gb|AEY73462.1| thymidylate kinase [Vaccinia virus]
gi|373448321|gb|AEY73703.1| thymidylate kinase [Vaccinia virus]
gi|373448551|gb|AEY73932.1| thymidylate kinase [Vaccinia virus]
gi|373448792|gb|AEY74172.1| thymidylate kinase [Vaccinia virus]
gi|373449034|gb|AEY74413.1| thymidylate kinase [Vaccinia virus]
gi|373449263|gb|AEY74641.1| thymidylate kinase [Vaccinia virus]
gi|373449504|gb|AEY74881.1| thymidylate kinase [Vaccinia virus]
gi|373449745|gb|AEY75121.1| thymidylate kinase [Vaccinia virus]
gi|439966017|gb|AGB75891.1| thymidylate kinase [Vaccinia virus]
Length = 204
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 122/214 (57%), Gaps = 25/214 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPANTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRY+FSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV + Y+
Sbjct: 102 AAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVTFQQKVLQEYK 158
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ D W I ++ + D ++K+IVI+ I
Sbjct: 159 KMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 192
>gi|56404622|sp|Q8QMQ7.2|KTHY_CWPXB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
Length = 204
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 122/214 (57%), Gaps = 25/214 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPSNTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRY+FSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV + Y+
Sbjct: 102 AAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVAFQQKVLQEYK 158
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ D W I ++ + D ++K+IVI+ I
Sbjct: 159 KMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 192
>gi|224059750|ref|XP_002191830.1| PREDICTED: thymidylate kinase [Taeniopygia guttata]
Length = 215
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 104/184 (56%), Gaps = 21/184 (11%)
Query: 44 FP-DRTISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSL 102
FP DR+ G +I YL ++ L D HLLFSANRWE P + + + QGIT+ +
Sbjct: 44 FPADRSTEIGQLISSYLGREKNLEDHTIHLLFSANRWEHVPMMKEKLHQGITVVV----- 98
Query: 103 ENEKNLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR 162
DRY+FSGVAF++AK + WC QP+ GLPKPD +L +LN EA R
Sbjct: 99 ------------DRYAFSGVAFTSAKGNFGLEWCKQPDVGLPKPDLILFLQLNPEAAAER 146
Query: 163 KGFGDERYEQTDFQRKVAENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
FG ERYE + FQ KV +++ L ++ W +DA K I+ L +K I +T+++ Q
Sbjct: 147 GDFGHERYETSSFQEKVLQSFYCLMEDKSLNWKTVDASKSIEDLHREIKSIAKETMEEVQ 206
Query: 220 FSPL 223
PL
Sbjct: 207 NKPL 210
>gi|160858058|emb|CAM58346.1| thymidylate kinase [Vaccinia virus Ankara]
gi|325558340|gb|ADZ29720.1| thymidylate kinase [Cowpox virus]
Length = 204
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 122/214 (57%), Gaps = 25/214 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPANTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRY+FSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV + Y+
Sbjct: 102 AAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVAFQQKVLQEYK 158
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ D W I ++ + D ++K+IVI+ I
Sbjct: 159 KMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 192
>gi|325559198|gb|ADZ30574.1| thymidylate kinase [Cowpox virus]
Length = 280
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 123/215 (57%), Gaps = 25/215 (11%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI 63
++ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 76 KMSRGALIVFEGLDKSGKTTQCMNIMESIPSNTI--KYLNFPQRSTVTGKMIDDYLTRKK 133
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
D +LLF ANRWE + + +EQGITL + DRY+FSGVA
Sbjct: 134 TYNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVA 176
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
++AAK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV + Y
Sbjct: 177 YAAAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINR--NVGEEIYEDVTFQQKVLQEY 233
Query: 184 EKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
+K+ D W I ++ + D ++K+IVI+ I
Sbjct: 234 KKMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 268
>gi|51342318|gb|AAU01362.1| MPXV-WRAIR152 [Monkeypox virus]
gi|58220622|gb|AAW67910.1| MPXV-SL-152 [Monkeypox virus]
gi|59858958|gb|AAX09253.1| MPXV-COP-152 [Monkeypox virus]
gi|68448840|gb|AAY96963.1| thymidylate kinase [Monkeypox virus]
gi|68449442|gb|AAY97562.1| thymidylate kinase [Monkeypox virus]
gi|68449642|gb|AAY97761.1| thymidylate kinase [Monkeypox virus]
Length = 204
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 122/214 (57%), Gaps = 25/214 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPANTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRY+FSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+ AK G ++ E GLPKPD V+ + + + R G+E YE +FQ+KV + Y+
Sbjct: 102 ATAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--IGEEIYEDVEFQQKVLQEYK 158
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ D W I ++ + D ++K+IVI+ I
Sbjct: 159 KMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 192
>gi|300701613|ref|XP_002994999.1| hypothetical protein NCER_102294 [Nosema ceranae BRL01]
gi|239603498|gb|EEQ81328.1| hypothetical protein NCER_102294 [Nosema ceranae BRL01]
Length = 199
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 121/212 (57%), Gaps = 25/212 (11%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
F+VFEG D+SGK+T + L + +I + ++FPDR+ TG I+++YL K+ L ++A
Sbjct: 2 FVVFEGLDKSGKSTTCDSVYKKLKELDIHTTQMHFPDRSSITGEILNKYLLGKVNLTNEA 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
HLLFSA+R++++ + K GI L C DRYS+SG+ FS AK
Sbjct: 62 THLLFSADRYQKKNFIEKTSRSGILL----------------C--DRYSWSGICFSHAK- 102
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKDN 189
G+D+ W + E+ LPKPD + + L +R +GDE E +FQ K AE Y +++D
Sbjct: 103 GIDLGWAVETERLLPKPDITFFLEADVNVLMKRHNWGDEILETREFQLKAAEAYLQMRDY 162
Query: 190 I--WIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
+ I IDA K + + DIV+DTI K Q
Sbjct: 163 VKNLIKIDATKSVAE----ITDIVVDTIIKFQ 190
>gi|71030486|ref|XP_764885.1| thymidylate kinase [Theileria parva strain Muguga]
gi|68351841|gb|EAN32602.1| thymidylate kinase, putative [Theileria parva]
Length = 213
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 108/199 (54%), Gaps = 19/199 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE-L 65
RG IVFEG DRSGK+TQ + L L++ NI ++ + FP +T TG ++ YL + E +
Sbjct: 8 RGKLIVFEGIDRSGKSTQIRLLSQKLSEENIKNEVLTFPYKTTPTGKLLRSYLGNRDESI 67
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
P QA HLLFSANRWE + KL++ G + DRY+FSG+A+S
Sbjct: 68 PKQALHLLFSANRWEVMNRIIKLLKSGTHV-----------------ITDRYAFSGIAYS 110
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
EG+D +WC P+ G+ +PD V L E R FG E YE + V E +++
Sbjct: 111 VGAEGLDFNWCLIPDTGIVEPDIVFYMDLAPECSSARGNFGSEIYENLENMENVYEVFKR 170
Query: 186 LKD-NIWIDIDADKDIDTL 203
+ + W +I A+ D D +
Sbjct: 171 FGNLSYWNNIKANHDRDQI 189
>gi|88900791|gb|ABD57703.1| VACV203 [Vaccinia virus]
Length = 204
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 25/212 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 3 RGALIVFEGLDKSGKTTQCMNIMESIPANTI--KYLNFPQRSTVTGKMIDDYLTRKKTYN 60
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D +LLF ANRWE + + +EQGITL + DRY+FSGVA++A
Sbjct: 61 DHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAYAA 103
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV + Y+K+
Sbjct: 104 AK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVTFQQKVLQEYKKM 160
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
D W I ++ + D ++K+IVI+ I
Sbjct: 161 IEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 192
>gi|17975072|ref|NP_536586.1| A49R [Monkeypox virus Zaire-96-I-16]
gi|17529939|gb|AAL40617.1|AF380138_159 A49R [Monkeypox virus Zaire-96-I-16]
gi|68449041|gb|AAY97163.1| thymidylate kinase [Monkeypox virus]
gi|68449243|gb|AAY97364.1| thymidylate kinase [Monkeypox virus]
gi|323098573|gb|ADX22811.1| thymidylate kinase [Monkeypox virus]
gi|451327848|gb|AGF36720.1| thymidylate kinase [Monkeypox virus]
gi|451328056|gb|AGF36927.1| thymidylate kinase [Monkeypox virus]
Length = 204
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 122/214 (57%), Gaps = 25/214 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPANTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRY+FSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+ AK G ++ E GLPKPD V+ + + + R G+E YE +FQ+KV + Y+
Sbjct: 102 ATAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVEFQQKVLQEYK 158
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ D W I ++ + D ++K+IVI+ I
Sbjct: 159 KMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 192
>gi|56404611|sp|Q8JL72.2|KTHY_ECTVM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
Length = 204
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 123/214 (57%), Gaps = 25/214 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPSNTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRY+FSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G ++ E GLPKPD V+ + + + R G+E YE +FQ+KV + Y+
Sbjct: 102 AAAK-GAPMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVEFQQKVLQEYK 158
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ D W I ++ + D ++K+IVI+ +
Sbjct: 159 KMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAM 192
>gi|146420481|ref|XP_001486196.1| hypothetical protein PGUG_01867 [Meyerozyma guilliermondii ATCC
6260]
Length = 215
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 103/191 (53%), Gaps = 31/191 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQ-FVNFPDRTISTGHIIDEYLR-KKIE 64
RG I+ EG DRSGKTTQ + L N IPS + FPDR+ + G II++YL
Sbjct: 2 RGHLILIEGLDRSGKTTQTQIL-----HNAIPSSSLIKFPDRSTNIGTIINQYLTDHNFS 56
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L DQAAHLLFSANRWE + +S+E++ DRY +SG+A+
Sbjct: 57 LSDQAAHLLFSANRWE-----------------LAASIEDQLQAGHTVIMDRYIYSGIAY 99
Query: 125 SAAK-------EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQR 177
S AK E + W + P++GLPKPD + L+ + RK +G+ERYEQT FQ
Sbjct: 100 SLAKLETSSLPEMASVEWLYAPDRGLPKPDVTIFLTLDIAEMAARKSWGEERYEQTKFQE 159
Query: 178 KVAENYEKLKD 188
V + K+ D
Sbjct: 160 VVKRCFLKVLD 170
>gi|190345821|gb|EDK37769.2| hypothetical protein PGUG_01867 [Meyerozyma guilliermondii ATCC
6260]
Length = 215
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 103/191 (53%), Gaps = 31/191 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQ-FVNFPDRTISTGHIIDEYLR-KKIE 64
RG I+ EG DRSGKTTQ + L N IPS + FPDR+ + G II++YL
Sbjct: 2 RGHLILIEGLDRSGKTTQTQIL-----HNAIPSSSLIKFPDRSTNIGTIINQYLTDHNFS 56
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L DQAAHLLFSANRWE + +S+E++ DRY +SG+A+
Sbjct: 57 LSDQAAHLLFSANRWE-----------------LAASIEDQLQAGHTVIMDRYIYSGIAY 99
Query: 125 SAAK-------EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQR 177
S AK E + W + P++GLPKPD + L+ + RK +G+ERYEQT FQ
Sbjct: 100 SLAKSETSSSPEMASVEWLYAPDRGLPKPDVTIFLTLDIAEMAARKSWGEERYEQTKFQE 159
Query: 178 KVAENYEKLKD 188
V + K+ D
Sbjct: 160 VVKRCFLKVLD 170
>gi|403366547|gb|EJY83076.1| Thymidylate kinase [Oxytricha trifallax]
Length = 245
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 113/199 (56%), Gaps = 25/199 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKN-NIPSQFVNFPDRTISTGHIIDEYLR-KK 62
I RG FIVFEG DRSGK+TQ+ ++ Y + ++ ++FP R + G ++++YL+ ++
Sbjct: 17 IQRGLFIVFEGLDRSGKSTQSSRVAKYFKEELQRKTETMSFPKRDTNGGKMLNDYLQNRE 76
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+L D+A H LF+ NRWE P + ++++ G + DRY+FSGV
Sbjct: 77 NKLNDKAVHTLFAFNRWEMVPDIIQMLKNGTNI-----------------ICDRYAFSGV 119
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
A+SAAK G+D WC ++GL PD + + L +R +GDERYE+ DFQ KV
Sbjct: 120 AYSAAK-GLDFEWCKNSDRGLVTPDLTFYIDVAPDVLAQRGNYGDERYERLDFQTKVGHV 178
Query: 183 YEKLKDNI-----WIDIDA 196
Y++ K + W IDA
Sbjct: 179 YDRFKQDFKDSEHWATIDA 197
>gi|116200466|ref|XP_001226045.1| hypothetical protein CHGG_10778 [Chaetomium globosum CBS 148.51]
gi|88175492|gb|EAQ82960.1| hypothetical protein CHGG_10778 [Chaetomium globosum CBS 148.51]
Length = 317
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 98/176 (55%), Gaps = 19/176 (10%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA +V EG DRSGKTTQ K L + + + FPDRT G +ID YL+ ++E
Sbjct: 62 VARGALVVLEGLDRSGKTTQVKLLEQRFVELGRKVKVMRFPDRTTPIGQMIDSYLKSQVE 121
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ D HLLFSANRWE T+T L+ Q T+ C DRY SG+ +
Sbjct: 122 MDDHVIHLLFSANRWEAAKTITHLLTQSTTVL---------------C--DRYYHSGIVY 164
Query: 125 SAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRK 178
S+AK+ + + W PE GLP+PD VL L+E + R G+G E YE+ + QR+
Sbjct: 165 SSAKQNPSLTLPWARGPEIGLPRPDLVLFLDLDENQARARGGWGGEAYERAEMQRR 220
>gi|327353237|gb|EGE82094.1| thymidylate kinase [Ajellomyces dermatitidis ATCC 18188]
Length = 225
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 118/219 (53%), Gaps = 32/219 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
GA IV EG DR+GK+TQ L L ++ ++ FPDRT G +I+ YL L D
Sbjct: 6 GALIVVEGLDRAGKSTQCAILQKTLQEDGHEVKYRRFPDRTTEIGKMINAYLMGNTHLDD 65
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
A HLLFSANRWE + + I GIT+ I DRYS+SGV +SAA
Sbjct: 66 HAIHLLFSANRWEAATEIQQDISNGITVII-----------------DRYSYSGVVYSAA 108
Query: 128 KEGMDIS--WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
K+ ++S W +QPE GLP+PD L ++ E +R G+G ERYE FQ ++ + ++
Sbjct: 109 KDIPELSLDWAWQPEIGLPQPDIWLFLNISPEEAAKRGGYGLERYENDTFQSRIRQLFQT 168
Query: 186 L-----KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
L DN+ I IDA G +++ +D I+ ++
Sbjct: 169 LIAREDPDNVHI-IDA-------GRTEREVALDVIETAR 199
>gi|296425149|ref|XP_002842105.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638364|emb|CAZ86296.1| unnamed protein product [Tuber melanosporum]
Length = 214
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 118/206 (57%), Gaps = 23/206 (11%)
Query: 1 MASQIP--RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEY 58
M+S P RGA I EG DR+GK+TQ + L+D L + N+P++ FPDRT G +I+ Y
Sbjct: 1 MSSSAPKTRGALIAIEGLDRAGKSTQCQLLMDRLAERNVPARLQKFPDRTTPIGKMINAY 60
Query: 59 LRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
L L D HLLFSANRWE + KL+ G+T+ + DRY
Sbjct: 61 LSTSTTLEDHTIHLLFSANRWELSAHILKLLNDGVTIVL-----------------DRYV 103
Query: 119 FSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRK 178
+SG+ FSAAK G+ + +C P+ GLP+ D VL L+ E +RR GFG ERYE QR+
Sbjct: 104 YSGIVFSAAK-GLSLDYCRAPDVGLPRADVVLFLDLDAEVARRRGGFGGERYEVEAVQRR 162
Query: 179 VAENYEKL---KDNIWIDIDADKDID 201
V + ++++ ++ W +DA + ++
Sbjct: 163 VRDLFKEVGEKEEGRWRVVDAGRSVE 188
>gi|254570737|ref|XP_002492478.1| Thymidylate and uridylate kinase [Komagataella pastoris GS115]
gi|238032276|emb|CAY70299.1| Thymidylate and uridylate kinase [Komagataella pastoris GS115]
gi|328353509|emb|CCA39907.1| dTMP kinase [Komagataella pastoris CBS 7435]
Length = 202
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 109/200 (54%), Gaps = 28/200 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE-L 65
R IV EG DR+GK+TQ KL LN V FP+R G ++++YL +
Sbjct: 2 RAPLIVIEGLDRTGKSTQTAKLCHRLN-----GFLVKFPNRETPIGKLLNQYLTDASNPM 56
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
P + AHLLFSANRWE + L+ +G + + DRY +SGVA+S
Sbjct: 57 PLEVAHLLFSANRWEMVKNIEDLLSKGTPVVM-----------------DRYVYSGVAYS 99
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQRKVAENYE 184
AK G+DI WC P+KGLPKPD + K N+ +++ +R+GFG+ERYE Q V N+E
Sbjct: 100 MAK-GLDIEWCLAPDKGLPKPDVTIFLKANDLDSISQREGFGEERYEVASLQTSVRNNFE 158
Query: 185 KLKDNI--WIDIDAD-KDID 201
L+ W I D KDID
Sbjct: 159 ILRSRYDEWKVIIIDGKDID 178
>gi|346318170|gb|EGX87774.1| thymidylate kinase, putative [Cordyceps militaris CM01]
Length = 240
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 98/182 (53%), Gaps = 19/182 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIV EG DRSGKTTQ K L L + + FPDRT G +ID YL+ + +
Sbjct: 15 RGAFIVLEGLDRSGKTTQVKLLEQKLVDQGKKVKLMRFPDRTTQIGQMIDAYLKSAVRMD 74
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE T+ ++ G T+ DRY+ SG+ +SA
Sbjct: 75 DHAIHLLFSANRWEAAETINTILASGTTI-----------------VCDRYAHSGMVYSA 117
Query: 127 AK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK + + W + GLP+PD V+ L+E + R G+G+E YE+ + QR+V +
Sbjct: 118 AKGLASLRLPWARAADAGLPRPDRVVFLDLDEATARARGGWGEEVYERGEMQRQVRRLFG 177
Query: 185 KL 186
L
Sbjct: 178 AL 179
>gi|9627681|ref|NP_042204.1| hypothetical protein VARVgp160 [Variola virus]
gi|462468|sp|P33803.1|KTHY_VAR67 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|439072|gb|AAA60903.1| homolog of vaccinia virus CDS A48R (thymidylate kinase); putative
[Variola major virus]
gi|457051|emb|CAA49101.1| J2R [Variola virus]
gi|516401|emb|CAA47543.1| thymidylate kinase [Variola virus]
gi|5830722|emb|CAB54761.1| K2R protein [Variola minor virus]
gi|94483807|gb|ABF22924.1| thymidylate kinase [Variola virus]
gi|94484011|gb|ABF23127.1| thymidylate kinase [Variola virus]
gi|94484214|gb|ABF23329.1| thymidylate kinase [Variola virus]
gi|94484421|gb|ABF23535.1| thymidylate kinase [Variola virus]
gi|94484623|gb|ABF23736.1| thymidylate kinase [Variola virus]
gi|94484821|gb|ABF23933.1| thymidylate kinase [Variola virus]
gi|94485019|gb|ABF24130.1| thymidylate kinase [Variola virus]
gi|94485217|gb|ABF24327.1| thymidylate kinase [Variola virus]
gi|94485419|gb|ABF24528.1| thymidylate kinase [Variola virus]
gi|94485622|gb|ABF24730.1| thymidylate kinase [Variola virus]
gi|94485824|gb|ABF24931.1| thymidylate kinase [Variola virus]
gi|94486028|gb|ABF25134.1| thymidylate kinase [Variola virus]
gi|94486229|gb|ABF25334.1| thymidylate kinase [Variola virus]
gi|94486432|gb|ABF25536.1| thymidylate kinase [Variola virus]
gi|94486635|gb|ABF25738.1| thymidylate kinase [Variola virus]
gi|94486837|gb|ABF25939.1| thymidylate kinase [Variola virus]
gi|94487040|gb|ABF26141.1| thymidylate kinase [Variola virus]
gi|94487242|gb|ABF26342.1| thymidylate kinase [Variola virus]
gi|94487445|gb|ABF26544.1| thymidylate kinase [Variola virus]
gi|94487648|gb|ABF26746.1| thymidylate kinase [Variola virus]
gi|94487849|gb|ABF26946.1| thymidylate kinase [Variola virus]
gi|94488053|gb|ABF27149.1| thymidylate kinase [Variola virus]
gi|94488656|gb|ABF27749.1| thymidylate kinase [Variola virus]
gi|94488857|gb|ABF27949.1| thymidylate kinase [Variola virus]
gi|94489057|gb|ABF28148.1| thymidylate kinase [Variola virus]
gi|94489257|gb|ABF28347.1| thymidylate kinase [Variola virus]
gi|94489458|gb|ABF28547.1| thymidylate kinase [Variola virus]
gi|94489859|gb|ABF28946.1| thymidylate kinase [Variola virus]
gi|94490268|gb|ABF29353.1| thymidylate kinase [Variola virus]
gi|109724203|gb|ABG43329.1| thymidylate kinase [Variola virus]
gi|109724407|gb|ABG43532.1| thymidylate kinase [Variola virus]
gi|109724610|gb|ABG43734.1| thymidylate kinase [Variola virus]
gi|109724814|gb|ABG43937.1| thymidylate kinase [Variola virus]
gi|109725017|gb|ABG44139.1| thymidylate kinase [Variola virus]
gi|109725222|gb|ABG44343.1| thymidylate kinase [Variola virus]
gi|109725427|gb|ABG44547.1| thymidylate kinase [Variola virus]
gi|109725629|gb|ABG44748.1| thymidylate kinase [Variola virus]
gi|109725833|gb|ABG44951.1| thymidylate kinase [Variola virus]
gi|109726036|gb|ABG45153.1| thymidylate kinase [Variola virus]
gi|109726442|gb|ABG45557.1| thymidylate kinase [Variola virus]
gi|109726646|gb|ABG45760.1| thymidylate kinase [Variola virus]
gi|745282|prf||2015436GF J2R gene
Length = 205
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 122/215 (56%), Gaps = 26/215 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPTNTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRY+FSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+ AK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV + Y+
Sbjct: 102 ATAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVAFQQKVLQEYK 158
Query: 185 KL----KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ +D W I ++ + D ++K+IVI+ I
Sbjct: 159 KMIEEGEDIHWQIISSEFEEDVKKELIKNIVIEAI 193
>gi|195335464|ref|XP_002034385.1| GM19929 [Drosophila sechellia]
gi|194126355|gb|EDW48398.1| GM19929 [Drosophila sechellia]
Length = 182
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 113/222 (50%), Gaps = 50/222 (22%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA I+FEGCDRSGKTTQ++ LV+ L IP+ +NFP+R+ S G +I+ YL +LP
Sbjct: 6 RGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKDLP 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HL+FSANRWE M+ +L+
Sbjct: 66 DEVIHLMFSANRWEH----------------MNQTLD----------------------- 86
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
WC+ PE GL KPDAV + L R +GDERYE+ +FQ +VAE ++++
Sbjct: 87 --------WCYAPESGLIKPDAVFYLRAPSNELTNRGQYGDERYEKVEFQGRVAEVFDRI 138
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ + + DA + ++ L ++ I + + K PL++
Sbjct: 139 CSKEASYFHKFDATQSVEDLHALIGRITEELLPKVATQPLDT 180
>gi|56404626|sp|Q8QQ21.1|KTHY_CAMPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|56404634|sp|Q8V2K9.2|KTHY_CAMPM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|19718140|gb|AAG37665.1| CMP166R [Camelpox virus CMS]
Length = 204
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 122/214 (57%), Gaps = 25/214 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESILANTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRY+FSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G ++ E GLPKPD V+ + + + K G+E YE FQ+KV + Y+
Sbjct: 102 AAAK-GASMTLSKSYEFGLPKPDLVIFLESGSKEI--NKNVGEEIYEDVAFQQKVLQEYK 158
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ D W I ++ + D ++K+IVI+ I
Sbjct: 159 KMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 192
>gi|403221901|dbj|BAM40033.1| thymidylate kinase [Theileria orientalis strain Shintoku]
Length = 188
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 105/195 (53%), Gaps = 19/195 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE-L 65
RG FIVFEG DRSGK+TQ K L L + NI +Q + FP++ G I+ +YL+ + E +
Sbjct: 8 RGKFIVFEGIDRSGKSTQIKLLSQKLVEENIKNQIITFPNKGTPIGRILGDYLKSRDENI 67
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
P QA HLLFSANRWE + +++E G + DRY++SG+++S
Sbjct: 68 PKQALHLLFSANRWEEMNNIKQVLESGTHV-----------------ITDRYAYSGISYS 110
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
EG++ WC P+KGL +PD V + E R FG E YE + R V + ++K
Sbjct: 111 VGAEGLNFDWCTIPDKGLIQPDVVFYMDIEPEQTTSRGDFGVEIYENIEHLRSVHQAFKK 170
Query: 186 LKD-NIWIDIDADKD 199
W +I A D
Sbjct: 171 FTHLPYWNNIQAFGD 185
>gi|94490065|gb|ABF29151.1| thymidylate kinase [Variola virus]
Length = 205
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 122/215 (56%), Gaps = 26/215 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCINIMESIPTNTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRY+FSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+ AK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV + Y+
Sbjct: 102 ATAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVAFQQKVLQEYK 158
Query: 185 KL----KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ +D W I ++ + D ++K+IVI+ I
Sbjct: 159 KMIEEGEDIHWQIISSEFEEDVKKELIKNIVIEAI 193
>gi|94489660|gb|ABF28748.1| thymidylate kinase [Variola virus]
Length = 205
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 121/215 (56%), Gaps = 26/215 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPTNTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRY+FSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+ AK G ++ E GLPKPD V+ + + + R G+E YE FQ+KV + Y+
Sbjct: 102 ATAK-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVAFQQKVLQEYK 158
Query: 185 KL----KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ +D W I + + D ++K+IVI+ I
Sbjct: 159 KMIEEGEDIHWQIISSKFEEDVKKELIKNIVIEAI 193
>gi|226287197|gb|EEH42710.1| thymidylate kinase [Paracoccidioides brasiliensis Pb18]
Length = 232
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 100/180 (55%), Gaps = 19/180 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ L L + ++ FPDRT + G +I+ YL +L
Sbjct: 12 RGALIVVEGLDRAGKSTQCALLQKTLQREGHEVKYRRFPDRTTAIGKLINAYLVGDSQLD 71
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE + K I GI++ I DRYS+SG +SA
Sbjct: 72 DHSIHLLFSANRWEAAKEIQKDISNGISIII-----------------DRYSYSGAVYSA 114
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK+ G+ + W +QPE GLP+PD L ++ E RR G+G ERYE Q +V + ++
Sbjct: 115 AKDVPGLSLDWAWQPEIGLPQPDIWLFLNISPEEAARRGGYGLERYENDILQARVRQLFQ 174
>gi|149246800|ref|XP_001527825.1| thymidylate kinase [Lodderomyces elongisporus NRRL YB-4239]
gi|146447779|gb|EDK42167.1| thymidylate kinase [Lodderomyces elongisporus NRRL YB-4239]
Length = 237
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 118/232 (50%), Gaps = 48/232 (20%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNK------NNIPSQFVNFPDRTISTGHIIDEY 58
+PRG I+ EG DRSGK+TQA LV L S+ + FPDRT G +I+EY
Sbjct: 1 MPRGQLILIEGLDRSGKSTQASLLVSKLGHASSSSSPPCSSKLLKFPDRTTPIGKLINEY 60
Query: 59 L-RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
L K+ +L DQAAHLLF ANRWE + L+ QG + + DRY
Sbjct: 61 LTNKEFQLDDQAAHLLFLANRWELNQEIHNLLNQGCFVVL-----------------DRY 103
Query: 118 SFSGVAFSAAKEGMD-------------------ISWCFQPEKGLPKPDAVLLFKLNEEA 158
+SG+A++ AK +D + W P+KGLPKPD + L+ E
Sbjct: 104 IYSGIAYTLAKNNLDDSEANTSISRGKKSSNLASVDWLLGPDKGLPKPDLTMFLTLDLEE 163
Query: 159 LQRRKGFGDERYEQTDFQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDI 210
+ +RKG+G+ERYE FQ KV + ++ ++ + DK I+ L + K I
Sbjct: 164 ISKRKGWGNERYELQQFQAKVKRCFLQI-----LNSNQDKSIEILDVGEKSI 210
>gi|323098770|gb|ADX23007.1| thymidylate kinase [Monkeypox virus]
Length = 204
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 25/214 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPANTI--KYLNFPQRSTVTGKMIDDYLTRKKT 58
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D +LLF ANRWE + + +EQGITL + DRY+FSGVA+
Sbjct: 59 YNDHIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+ AK G ++ E GLP PD V+ + + + R G+E YE +FQ+KV + Y+
Sbjct: 102 ATAK-GASMTLSKSYESGLPXPDLVIFLESGSKEINRN--VGEEIYEDVEFQQKVLQEYK 158
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
K+ D W I ++ + D ++K+IVI+ I
Sbjct: 159 KMIEEGDIHWQIISSEFEEDVKKELIKNIVIEAI 192
>gi|392298482|gb|EIW09579.1| Cdc8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 216
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 104/188 (55%), Gaps = 24/188 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KI 63
+ RG I+ EG DR+GKTTQ L L N + + FP+R+ TG +I+EYL
Sbjct: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPN---CKLLKFPERSTRTGGLINEYLTDDSF 58
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+L DQA HLLFSANRWE + K + +G KN+ DRY +SGVA
Sbjct: 59 QLSDQAIHLLFSANRWEIVDKIKKDLLEG-------------KNI----VMDRYVYSGVA 101
Query: 124 FSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQRKVA 180
+SAAK GMD+ WC QP+ GL KPD L + + + GFGDERYE FQ KV
Sbjct: 102 YSAAKGTNGMDLDWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVK 161
Query: 181 ENYEKLKD 188
+ + KL D
Sbjct: 162 QTFMKLLD 169
>gi|294658466|ref|XP_460810.2| DEHA2F10252p [Debaryomyces hansenii CBS767]
gi|202953154|emb|CAG89151.2| DEHA2F10252p [Debaryomyces hansenii CBS767]
Length = 218
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 116/221 (52%), Gaps = 38/221 (17%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKI 63
+ RG I+ EG DRSGK+TQ+ L + L + + FPDR+ G II+EYL ++
Sbjct: 1 MGRGQLILIEGLDRSGKSTQSGILSERLPG----GKLIKFPDRSTKVGSIINEYLTNSEL 56
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
L DQ AHLLFSANRWE + S+ N+ N DRY +SG+A
Sbjct: 57 NLSDQTAHLLFSANRWE-----------------LADSIVNDLNKGHFIVMDRYIYSGIA 99
Query: 124 FSAAK---------EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTD 174
+S AK E I W + P+KGLPKPD + L+ E L RKG+G+ERYE+ +
Sbjct: 100 YSLAKSRFSNDSSPEMASIDWLYSPDKGLPKPDLTIFLTLSLEELSNRKGWGEERYEKEN 159
Query: 175 FQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
FQ+ V + ++ ++AD D + V ++ ID +
Sbjct: 160 FQKSVKNCFLEV-------LNADNDASVHIIDVNNLNIDQV 193
>gi|443711881|gb|ELU05444.1| hypothetical protein CAPTEDRAFT_104860 [Capitella teleta]
gi|443718945|gb|ELU09318.1| hypothetical protein CAPTEDRAFT_110243 [Capitella teleta]
Length = 233
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 129/237 (54%), Gaps = 43/237 (18%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNK-----------NNIPSQFVNFPDRTISTGHII 55
RG IV EGCD GK+TQA+KLVD LN + ++ FP+R + G +I
Sbjct: 5 RGMLIVLEGCDGCGKSTQARKLVDALNTTPREGEGSLGGHVTHAELWKFPNRDTAIGRLI 64
Query: 56 DEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTND 115
DEYL+ K E+ D A HLLF+ANRWE P L + +E+GI++ IM D
Sbjct: 65 DEYLQNKCEMEDHAIHLLFAANRWEMVPCLLETLEKGISV-IM----------------D 107
Query: 116 RYSFSGVAFSAA-KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKG---------F 165
RY+FSG+AFSAA K+ + WC ++GLP+PD VL L+ ++ R +
Sbjct: 108 RYAFSGLAFSAAKKKKLGFQWCKIADQGLPRPDLVLYLSLSSLEMEARWNKKERDGTMVY 167
Query: 166 GDERYEQTDFQRKVAENYEKL---KDNIWIDIDA-DKDIDTLGLIVKDIVIDTIKKS 218
ERYE+ FQ +V Y KL +DN W I+ +K I+ + + +I+ D +K S
Sbjct: 168 IRERYEKVAFQNQVQAEYGKLMMGEDN-WHVIEVNNKSIEVIHRNLLNIIKDNVKIS 223
>gi|94488256|gb|ABF27351.1| thymidylate kinase [Variola virus]
gi|94488456|gb|ABF27550.1| thymidylate kinase [Variola virus]
gi|109726240|gb|ABG45356.1| thymidylate kinase [Variola virus]
Length = 205
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 120/212 (56%), Gaps = 26/212 (12%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
GA IVFEG D+SGKTTQ +++ + N I +++NFP R+ TG +ID+YL +K D
Sbjct: 4 GALIVFEGLDKSGKTTQCMNIMESIPTNTI--KYLNFPQRSTVTGKMIDDYLTRKKTYND 61
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+LLF ANRWE + + +EQGITL + DRY+FSGVA++ A
Sbjct: 62 HIVNLLFCANRWEFASFIQEQLEQGITLIV-----------------DRYAFSGVAYATA 104
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL- 186
K G ++ E GLPKPD V+ + + + R G+E YE FQ+KV + Y+K+
Sbjct: 105 K-GASMTLSKSYESGLPKPDLVIFLESGSKEINRN--VGEEIYEDVAFQQKVLQEYKKMI 161
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
+D W I ++ + D ++K+IVI+ I
Sbjct: 162 EEGEDIHWQIISSEFEEDVKKELIKNIVIEAI 193
>gi|444323131|ref|XP_004182206.1| hypothetical protein TBLA_0I00220 [Tetrapisispora blattae CBS 6284]
gi|387515253|emb|CCH62687.1| hypothetical protein TBLA_0I00220 [Tetrapisispora blattae CBS 6284]
Length = 242
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 109/194 (56%), Gaps = 31/194 (15%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPS------QFVNFPDRTISTGHIIDEY 58
+ RG I+FEG DR+GKTTQ++ L+ YLN S + + FP+R+ G +I+ Y
Sbjct: 1 MTRGRLILFEGLDRTGKTTQSEALLKYLNLQGDQSSSSKRCELIKFPERSTPIGKLINNY 60
Query: 59 L-RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
L K +LPDQ+ HLLFS+NRWE L EQ + SSL+ ++ DRY
Sbjct: 61 LVDKSFKLPDQSIHLLFSSNRWE-------LTEQ------IKSSLQKGNDV----LLDRY 103
Query: 118 SFSGVAFSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEA-----LQRRKGFGDERY 170
FSG+A+S AK E MD WC P+ GL KPD + + + + R GFG ERY
Sbjct: 104 VFSGIAYSLAKDTERMDFDWCLSPDIGLIKPDLTIFLTTDSDISTSNQINNRSGFGAERY 163
Query: 171 EQTDFQRKVAENYE 184
E++DFQ KV ++
Sbjct: 164 EKSDFQLKVKAKFD 177
>gi|29841447|gb|AAP06479.1| SJCHGC06009 protein [Schistosoma japonicum]
Length = 238
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 25/213 (11%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNK-NNIPSQFVNFPDRTISTGHIIDEYL 59
MA + RG F+V EG DR GKTTQA L L++ + V FP+R GH +D YL
Sbjct: 1 MAGSVSRGIFVVLEGADRVGKTTQASLLAKALSEITQKKTLSVKFPNRDTPLGHQLDAYL 60
Query: 60 RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
++ A HLLF+ANRWE++ + I GI++ DRY +
Sbjct: 61 GGNGDINSHALHLLFTANRWEKQSEIRNAISNGISV-----------------VADRYIY 103
Query: 120 SGVAFSAAK--EGMDISWCFQPEKGLPKPDAVL-LFKLNEEALQRRKGFGDERYEQTDFQ 176
SG+A++AAK + WC + EKGL + D V+ L N + L R G+G+ERYE+ DFQ
Sbjct: 104 SGIAYTAAKLPPTPNWEWCCEMEKGLLEADLVICLTPENLDELNSRNGYGNERYEKDDFQ 163
Query: 177 RKVAENYEKLKDNIWID----IDADKDIDTLGL 205
++V ENY +L + +D + D+ D++GL
Sbjct: 164 KRVLENYVRLSKEVELDNSEWQNNDETGDSVGL 196
>gi|354545174|emb|CCE41901.1| hypothetical protein CPAR2_804510 [Candida parapsilosis]
Length = 227
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 108/203 (53%), Gaps = 41/203 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKIEL 65
RG I+ EG DRSGK+TQA L + S+ + FP+R+ + G +I+EYL K+ +L
Sbjct: 3 RGQLILIEGLDRSGKSTQASILASRFTQ----SKLIKFPERSTAIGQLINEYLTNKQFQL 58
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
DQ+AHLLFSANRWE + L+ QG + + DRY +SG+A++
Sbjct: 59 SDQSAHLLFSANRWELNQEILNLLHQGYFVIL-----------------DRYIYSGIAYT 101
Query: 126 AAKEG-------------------MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFG 166
AK ++ W P+KGLPKPD + L+ + + RKG+G
Sbjct: 102 LAKHKDMETTGATEATSVDSSTNLSNVEWLLAPDKGLPKPDLTMFLTLDMDEISSRKGWG 161
Query: 167 DERYEQTDFQRKVAENYEKLKDN 189
DERYE +FQ +V + + ++ D+
Sbjct: 162 DERYEMVEFQSRVKQCFLEVLDD 184
>gi|68486049|ref|XP_713041.1| hypothetical protein CaO19.8730 [Candida albicans SC5314]
gi|68486114|ref|XP_713007.1| hypothetical protein CaO19.1137 [Candida albicans SC5314]
gi|46434470|gb|EAK93878.1| hypothetical protein CaO19.1137 [Candida albicans SC5314]
gi|46434509|gb|EAK93916.1| hypothetical protein CaO19.8730 [Candida albicans SC5314]
gi|238878423|gb|EEQ42061.1| thymidylate kinase [Candida albicans WO-1]
Length = 224
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 122/239 (51%), Gaps = 44/239 (18%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKI 63
+ RG I+ EG DRSGK+TQA L L+ PS+ + FPDR+ G +I+EYL K
Sbjct: 1 MARGQLILIEGLDRSGKSTQASILSTKLS----PSKLIKFPDRSTPIGKLINEYLTNKSF 56
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
L DQAAHLLFSANRWE + L+ QG + + DRY +SG+A
Sbjct: 57 TLSDQAAHLLFSANRWELSQQIQDLLNQGYFIIL-----------------DRYIYSGIA 99
Query: 124 FSAAKEGM---------------DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDE 168
++ AK +I W P+KGLPKPD L L+ E + +RKG+GDE
Sbjct: 100 YTLAKNDFHDETISQGKNKQQLNNIDWLLSPDKGLPKPDLTLFLTLDLEEISKRKGWGDE 159
Query: 169 RYEQTDFQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLESNK 227
RYE FQ KV + + ++ +D +KD + V ID + + +E+NK
Sbjct: 160 RYELQQFQAKVKQCFLEI-------LDTNKDPTIRIVDVGGKTIDQVTTQLWEIIETNK 211
>gi|6322517|ref|NP_012591.1| Cdc8p [Saccharomyces cerevisiae S288c]
gi|1170719|sp|P00572.2|KTHY_YEAST RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|3318768|pdb|2TMK|A Chain A, Yeast Thymidylate Kinase Complexed With 3'-Azido-3'-
Deoxythymidine Monophosphate (Azt-Mp)
gi|3318769|pdb|2TMK|B Chain B, Yeast Thymidylate Kinase Complexed With 3'-Azido-3'-
Deoxythymidine Monophosphate (Azt-Mp)
gi|3318847|pdb|1TMK|A Chain A, Yeast Thymidylate Kinase Complexed With Thymidine
Monophosphate (Dtmp)
gi|3318848|pdb|1TMK|B Chain B, Yeast Thymidylate Kinase Complexed With Thymidine
Monophosphate (Dtmp)
gi|4558230|pdb|3TMK|A Chain A, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|4558231|pdb|3TMK|B Chain B, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|4558232|pdb|3TMK|C Chain C, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|4558233|pdb|3TMK|D Chain D, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|4558234|pdb|3TMK|E Chain E, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|4558235|pdb|3TMK|F Chain F, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|4558236|pdb|3TMK|G Chain G, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|4558237|pdb|3TMK|H Chain H, Crystal Structure Of Yeast Thymidylate Kinase Complexed
With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
Implications For Catalysis And Azt Activation
gi|172971|gb|AAB05644.1| thymidylate kinase [Saccharomyces cerevisiae]
gi|1015725|emb|CAA89585.1| CDC8 [Saccharomyces cerevisiae]
gi|1019679|gb|AAB39283.1| ORF YJR057w [Saccharomyces cerevisiae]
gi|151945125|gb|EDN63376.1| thymidylate kinase [Saccharomyces cerevisiae YJM789]
gi|285812946|tpg|DAA08844.1| TPA: Cdc8p [Saccharomyces cerevisiae S288c]
gi|349579242|dbj|GAA24405.1| K7_Cdc8p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 216
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 103/188 (54%), Gaps = 24/188 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KI 63
+ RG I+ EG DR+GKTTQ L L N + + FP+R+ G +I+EYL
Sbjct: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPN---CKLLKFPERSTRIGGLINEYLTDDSF 58
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+L DQA HLLFSANRWE + K + +G KN+ DRY +SGVA
Sbjct: 59 QLSDQAIHLLFSANRWEIVDKIKKDLLEG-------------KNI----VMDRYVYSGVA 101
Query: 124 FSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQRKVA 180
+SAAK GMD+ WC QP+ GL KPD L + + + GFGDERYE FQ KV
Sbjct: 102 YSAAKGTNGMDLDWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVK 161
Query: 181 ENYEKLKD 188
+ + KL D
Sbjct: 162 QTFMKLLD 169
>gi|323304253|gb|EGA58027.1| Cdc8p [Saccharomyces cerevisiae FostersB]
Length = 215
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 103/188 (54%), Gaps = 24/188 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KI 63
+ RG I+ EG DR+GKTTQ L L N + + FP+R+ G +I+EYL
Sbjct: 1 MGRGKLILIEGLDRTGKTTQCNILYKKLQPN---CKLLKFPERSTRXGGLINEYLTDDSF 57
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+L DQA HLLFSANRWE + K + +G KN+ DRY +SGVA
Sbjct: 58 QLSDQAIHLLFSANRWEIVDKIKKDLLEG-------------KNI----VMDRYVYSGVA 100
Query: 124 FSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQRKVA 180
+SAAK GMD+ WC QP+ GL KPD L + + + GFGDERYE FQ KV
Sbjct: 101 YSAAKGTNGMDLDWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVK 160
Query: 181 ENYEKLKD 188
+ + KL D
Sbjct: 161 QTFMKLLD 168
>gi|259147521|emb|CAY80772.1| Cdc8p [Saccharomyces cerevisiae EC1118]
gi|323308467|gb|EGA61712.1| Cdc8p [Saccharomyces cerevisiae FostersO]
gi|323336951|gb|EGA78208.1| Cdc8p [Saccharomyces cerevisiae Vin13]
gi|365764715|gb|EHN06236.1| Cdc8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 103/188 (54%), Gaps = 24/188 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KI 63
+ RG I+ EG DR+GKTTQ L L N + + FP+R+ G +I+EYL
Sbjct: 1 MGRGKLILIEGLDRTGKTTQCNILYKKLQPN---CKLLKFPERSTRIGGLINEYLTDDSF 57
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+L DQA HLLFSANRWE + K + +G KN+ DRY +SGVA
Sbjct: 58 QLSDQAIHLLFSANRWEIVDKIKKDLLEG-------------KNI----VMDRYVYSGVA 100
Query: 124 FSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQRKVA 180
+SAAK GMD+ WC QP+ GL KPD L + + + GFGDERYE FQ KV
Sbjct: 101 YSAAKGTNGMDLDWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVK 160
Query: 181 ENYEKLKD 188
+ + KL D
Sbjct: 161 QTFMKLLD 168
>gi|171204|gb|AAA34486.1| CDC8 gene [Saccharomyces cerevisiae]
Length = 216
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 103/188 (54%), Gaps = 24/188 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KI 63
+ RG I+ EG DR+GKTTQ L L N + + FP+R+ G +I+EYL
Sbjct: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPN---CKLLKFPERSTRIGGLINEYLTDDTF 58
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+L DQA HLLFSANRWE + K + +G KN+ DRY +SGVA
Sbjct: 59 QLSDQAIHLLFSANRWEIVDKIKKDLLEG-------------KNI----VMDRYVYSGVA 101
Query: 124 FSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQRKVA 180
+SAAK GMD+ WC QP+ GL KPD L + + + GFGDERYE FQ KV
Sbjct: 102 YSAAKGTNGMDLDWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVK 161
Query: 181 ENYEKLKD 188
+ + KL D
Sbjct: 162 QTFMKLLD 169
>gi|344230499|gb|EGV62384.1| P-loop containing nucleoside triphosphate hydrolase protein
[Candida tenuis ATCC 10573]
Length = 216
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 119/221 (53%), Gaps = 39/221 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIP-SQFVNFPDRTISTGHIIDEYLR-KKIE 64
RG I+ EG DRSGK+TQ ++L IP S FPDR+ G II++YL +
Sbjct: 2 RGHLILIEGLDRSGKSTQVERL-----HTAIPNSSTQKFPDRSTRIGAIINQYLTDESFV 56
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
LPDQ+ HLLFSANRWE ++++ ++ G T+ + DRY +SG+A+
Sbjct: 57 LPDQSIHLLFSANRWELIDSMSRALQSGTTVIL-----------------DRYIYSGIAY 99
Query: 125 SAAKEGMD--------ISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQ 176
S AK + + W + P+KGL KPD L LN + + R FGDERYE+ FQ
Sbjct: 100 SLAKSHFNHSDNQMASVEWLYSPDKGLLKPDLTLFLTLNMDEIDTRADFGDERYEKRAFQ 159
Query: 177 RKVAENYEKLKDN------IWIDIDADKDIDTLGLIVKDIV 211
V +N+ +L D +ID++ + ID +G + D+V
Sbjct: 160 EVVKDNFLRLLDPKVDSSIHFIDVNR-QSIDEVGRTIWDVV 199
>gi|172986|gb|AAA35158.1| thymidylate kinase [Saccharomyces cerevisiae]
gi|190409534|gb|EDV12799.1| thymidylate kinase [Saccharomyces cerevisiae RM11-1a]
gi|207343848|gb|EDZ71181.1| YJR057Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273082|gb|EEU08037.1| Cdc8p [Saccharomyces cerevisiae JAY291]
Length = 216
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 103/188 (54%), Gaps = 24/188 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KI 63
+ RG I+ EG DR+GKTTQ L L N + + FP+R+ G +I+EYL
Sbjct: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQPN---CKLLKFPERSTRIGGLINEYLTDDSF 58
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+L DQA HLLFSANRWE + K + +G KN+ DRY +SGVA
Sbjct: 59 QLSDQAIHLLFSANRWEIVDKIKKDLLEG-------------KNI----VMDRYVYSGVA 101
Query: 124 FSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQRKVA 180
+SAAK GMD+ WC QP+ GL KPD L + + + GFGDERYE FQ KV
Sbjct: 102 YSAAKGTNGMDLDWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVK 161
Query: 181 ENYEKLKD 188
+ + KL D
Sbjct: 162 QTFMKLLD 169
>gi|410920722|ref|XP_003973832.1| PREDICTED: thymidylate kinase-like isoform 2 [Takifugu rubripes]
Length = 188
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 114/220 (51%), Gaps = 44/220 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG D++GKTTQ +KLV L + P++ + FPDRT + G +I YL + EL
Sbjct: 5 RGALIVLEGVDKAGKTTQCQKLVQALRRKGHPAEMMRFPDRTTTIGKMISAYLENQSELS 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
DQ HLLFSANRWE P + K +EQG TL + DRY+FSGVAF++
Sbjct: 65 DQTVHLLFSANRWELVPLIKKKLEQGTTLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK L +A L R FG ERYE++ FQ V + ++ L
Sbjct: 108 AKP-------------LSPAEAAL-----------RGHFGMERYEKSSFQCAVQQQFKHL 143
Query: 187 KDN---IWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
++ W IDA +++ + + + ++ I +Q PL
Sbjct: 144 MEDETVNWKVIDASMNVEDVHKDITEHSLNAINIAQNLPL 183
>gi|367003062|ref|XP_003686265.1| hypothetical protein TPHA_0F03510 [Tetrapisispora phaffii CBS 4417]
gi|357524565|emb|CCE63831.1| hypothetical protein TPHA_0F03510 [Tetrapisispora phaffii CBS 4417]
Length = 224
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 104/183 (56%), Gaps = 25/183 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLN---KNNIPSQFVNFPDRTISTGHIIDEYLRKKI 63
RG I+ EG DR+GKTTQ ++LVD L K QF FP+R G +I+ YL
Sbjct: 4 RGKLILLEGLDRTGKTTQCERLVDILKETMKIEKVKQF-KFPNRENEIGKLINGYLTNSS 62
Query: 64 -ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
L DQA HLLFSANRWE + L+ +G + + DRY +SGV
Sbjct: 63 NSLSDQAIHLLFSANRWESINEIKNLLNEGYYVIL-----------------DRYVYSGV 105
Query: 123 AFSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
A+S AKE GMDI WC +KGL KPD + +F N++ + R+GFGDERYE+ FQ KV
Sbjct: 106 AYSLAKEVEGMDIDWCLNCDKGLIKPD-LTIFLTNDKTNKDREGFGDERYEKIAFQLKVK 164
Query: 181 ENY 183
E +
Sbjct: 165 EKF 167
>gi|295666950|ref|XP_002794025.1| thymidylate kinase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226277678|gb|EEH33244.1| thymidylate kinase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 232
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 99/180 (55%), Gaps = 19/180 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ L L + ++ FP+RT + G +I+ YL L
Sbjct: 12 RGALIVVEGLDRAGKSTQCALLQKTLQQEGHEVKYRRFPNRTTAIGKLINAYLVGDSHLD 71
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE + K I GI++ I DRYS+SG +SA
Sbjct: 72 DHSIHLLFSANRWEAAKEIRKDISNGISIII-----------------DRYSYSGAVYSA 114
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK+ G+ + W +QPE GLP+PD L ++ E RR G+G ERYE Q +V + ++
Sbjct: 115 AKDVPGLSLDWAWQPEIGLPQPDIWLFLNISPEEAARRGGYGLERYENDILQARVRQLFQ 174
>gi|328853928|gb|EGG03063.1| hypothetical protein MELLADRAFT_44639 [Melampsora larici-populina
98AG31]
Length = 222
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 116/232 (50%), Gaps = 39/232 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAF+V EG DR GK+TQ K L D L + + FPDR G +I YL ++ +L
Sbjct: 6 RGAFVVIEGLDRCGKSTQCKILADRLTNAGRSVELMRFPDRETVIGKMIHSYLNQESDLD 65
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLF+ANRWE+ + ++ G TL DRY+FSGVAF++
Sbjct: 66 DHAIHLLFAANRWEK-----RHLQSGTTL-----------------ICDRYAFSGVAFTS 103
Query: 127 AK-------EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
AK + + P++GLP PD V+ + EA R GFG ERYE+ D Q +V
Sbjct: 104 AKFQLRTPPQPESFTSLSSPDRGLPLPDLVIFLTMPMEATVTRGGFGQERYEKEDLQAEV 163
Query: 180 AENYEKLKD---------NIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSP 222
+E++ + W++I+A ID + + V D + S+ P
Sbjct: 164 KRQFEQVVEPAFTRLHGQGRWVEINASGSIDEVTCRISKTV-DRLLGSKLDP 214
>gi|17158497|ref|NP_477917.1| wsv395 [Shrimp white spot syndrome virus]
gi|17016791|gb|AAL33397.1| wsv395 [shrimp white spot syndrome virus]
gi|417072623|gb|AFX59772.1| wsv395 [White spot syndrome virus]
Length = 398
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 117/212 (55%), Gaps = 21/212 (9%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
+V EG DR GK+TQAK L+ N +++ FPDR+ TG +I++YL KKIEL D A
Sbjct: 204 LVVLEGGDRCGKSTQAKLLLTNKNSPLYGGEYMCFPDRSSHTGKLINDYLTKKIELDDHA 263
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
AHLLFSANRWE + +L++ GI + + DRY +SG+ FS A+
Sbjct: 264 AHLLFSANRWEVCSKIKQLLDDGIHVVM-----------------DRYYYSGIVFSLARG 306
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKD- 188
+ WC ++GLP+PD VLL L+ E R FG ER+E Q + + L +
Sbjct: 307 VDTVEWCSASDEGLPQPDLVLLMLLDVEKCSNRDTFGVERFETNSIQERARALFLDLANK 366
Query: 189 ---NIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
N+WI +DA I+ + + +IV + +++
Sbjct: 367 DEKNVWIKVDARGTIEEVQTKIINIVYNIVEE 398
>gi|11875610|gb|AAG40728.1|AF272669_1 thymidine kinase [White spot syndrome virus]
gi|15021563|gb|AAK77840.1|AF369029_171 ORF171, putative chimeric thymidine kinase - thymidylate kinase
[shrimp white spot syndrome virus]
gi|19482046|gb|AAL89322.1| WSSV454 [shrimp white spot syndrome virus]
Length = 388
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 117/212 (55%), Gaps = 21/212 (9%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
+V EG DR GK+TQAK L+ N +++ FPDR+ TG +I++YL KKIEL D A
Sbjct: 194 LVVLEGGDRCGKSTQAKLLLTNKNSPLYGGEYMCFPDRSSHTGKLINDYLTKKIELDDHA 253
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
AHLLFSANRWE + +L++ GI + + DRY +SG+ FS A+
Sbjct: 254 AHLLFSANRWEVCSKIKQLLDDGIHVVM-----------------DRYYYSGIVFSLARG 296
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKD- 188
+ WC ++GLP+PD VLL L+ E R FG ER+E Q + + L +
Sbjct: 297 VDTVEWCSASDEGLPQPDLVLLMLLDVEKCSNRDTFGVERFETNSIQERARALFLDLANK 356
Query: 189 ---NIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
N+WI +DA I+ + + +IV + +++
Sbjct: 357 DEKNVWIKVDARGTIEEVQTKIINIVYNIVEE 388
>gi|401837645|gb|EJT41548.1| CDC8-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 253
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 108/192 (56%), Gaps = 24/192 (12%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
A + RG I+ EG DR+GKTTQ L L N + + FP+R+ G +I++YL
Sbjct: 33 APTMGRGKLILIEGLDRTGKTTQCNILYKKLLPN---CELIKFPERSTRIGGLINQYLTD 89
Query: 62 -KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
++L DQA HLLFSANRWE + K + +G KN+ DRY +S
Sbjct: 90 DSLQLSDQAIHLLFSANRWEMVDGMKKALLEG-------------KNI----VMDRYVYS 132
Query: 121 GVAFSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQR 177
GVA+SAAK +GMD++WC QP+ GL KPD L + + + + GFG+ERYE FQ+
Sbjct: 133 GVAYSAAKKTDGMDLNWCLQPDIGLLKPDLTLFLSIQDVNSNAGKDGFGEERYETLKFQK 192
Query: 178 KVAENYEKLKDN 189
+V + L +N
Sbjct: 193 QVKHTFITLLEN 204
>gi|334347508|ref|XP_003341935.1| PREDICTED: thymidylate kinase-like isoform 2 [Monodelphis
domestica]
Length = 188
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 115/220 (52%), Gaps = 44/220 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GKTTQ +KLV L ++ P++ + FP+R+ G ++ YL KK +
Sbjct: 5 RGALIVLEGMDRAGKTTQGRKLVAALLQSGHPAELLRFPERSTEIGKLLGSYLEKKKNME 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE+ P + + + +G+TL + DRY+FSGVAF++
Sbjct: 65 DHTVHLLFSANRWEQVPLIKEKLSRGVTLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN-YEK 185
AKE L+ +R FG+ERYE FQ K + Y+
Sbjct: 108 AKE------------------------LSSVEAAKRGDFGNERYENNTFQEKALQRFYQL 143
Query: 186 LKDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+KD+ W IDA K+I+ L + + +TI+ Q P+
Sbjct: 144 MKDDSLNWKTIDASKNIEDLHKEIYSLSEETIQMVQEMPV 183
>gi|365759898|gb|EHN01658.1| Cdc8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 218
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 107/189 (56%), Gaps = 24/189 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KI 63
+ RG I+ EG DR+GKTTQ L L N + + FP+R+ G +I++YL +
Sbjct: 1 MGRGKLILIEGLDRTGKTTQCNILYKKLLPN---CELIKFPERSTRIGGLINQYLTDDSL 57
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+L DQA HLLFSANRWE + K + +G KN+ DRY +SGVA
Sbjct: 58 QLSDQAIHLLFSANRWEMVDGMKKALLEG-------------KNI----VMDRYVYSGVA 100
Query: 124 FSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQRKVA 180
+SAAK +GMD++WC QP+ GL KPD L + + + + GFG+ERYE FQ++V
Sbjct: 101 YSAAKKTDGMDLNWCLQPDIGLLKPDLTLFLSIQDVNSNAGKDGFGEERYETLKFQKQVK 160
Query: 181 ENYEKLKDN 189
+ L +N
Sbjct: 161 HTFITLLEN 169
>gi|67902452|ref|XP_681482.1| hypothetical protein AN8213.2 [Aspergillus nidulans FGSC A4]
gi|40739679|gb|EAA58869.1| hypothetical protein AN8213.2 [Aspergillus nidulans FGSC A4]
Length = 227
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 116/221 (52%), Gaps = 31/221 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPD-----RTISTGHIIDEYLRK 61
RGA IV EG DR+GK++Q K L + L + P +++ FP RT+ +ID YLR
Sbjct: 10 RGALIVVEGLDRAGKSSQCKFLHNILQEGGRPVKYIRFPGDSSFARTLRR-KLIDGYLRG 68
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+ L D + HLLFSANRWE ++ I G ++ I DRYS+SG
Sbjct: 69 QSHLDDHSIHLLFSANRWEVAQSIEADIANGTSVII-----------------DRYSYSG 111
Query: 122 VAFSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
+SAAK + + W +QPE GLPKPD L ++ E +R GFG ERYE Q +V
Sbjct: 112 AVYSAAKANPSLSLEWAWQPEVGLPKPDLCLFLSISPEEAAKRGGFGGERYENEAMQTRV 171
Query: 180 AENYEKLKD-----NIWIDIDADKDIDTLGLIVKDIVIDTI 215
E + + D +I I IDA K + + + ++V + I
Sbjct: 172 RELFNTIFDLQRATDIRI-IDAGKSLAEVSQDILNVVTERI 211
>gi|255728491|ref|XP_002549171.1| hypothetical protein CTRG_03468 [Candida tropicalis MYA-3404]
gi|240133487|gb|EER33043.1| hypothetical protein CTRG_03468 [Candida tropicalis MYA-3404]
Length = 222
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 120/227 (52%), Gaps = 41/227 (18%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKI 63
+PRG I+ EG DRSGK+TQA L SQ + FPDR+ G +I+EYL K
Sbjct: 1 MPRGQLILIEGLDRSGKSTQASILASKFTS----SQLIKFPDRSTPIGKLINEYLTNKSF 56
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
L DQ+AHLLFSANRWE + +L+ +G + + DRY +SG+A
Sbjct: 57 SLNDQSAHLLFSANRWELNQQIQELLNKGYFVIL-----------------DRYIYSGIA 99
Query: 124 FSAAKEGM---------------DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDE 168
++ AK + D+ W P+KGLPKPD L L+ E + +RKG+GDE
Sbjct: 100 YTLAKNEINDESISSGKNSKQLGDVDWLLAPDKGLPKPDLTLFLTLDLEEISKRKGWGDE 159
Query: 169 RYEQTDFQRKVAENYEKLKD----NIWIDIDADKDIDTLGLIVKDIV 211
RYE FQ KV + + ++ D +I I +K+ID + + DI+
Sbjct: 160 RYELQQFQAKVKDCFLQVLDTKDPSICIVDVGEKNIDQVSKQLWDII 206
>gi|358336715|dbj|GAA40579.2| dTMP kinase [Clonorchis sinensis]
Length = 253
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 103/191 (53%), Gaps = 22/191 (11%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNK-NNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
G FI EG DR+GK+TQA L D L K + + FPDR + G +D YL+ ++
Sbjct: 26 GIFIAIEGADRTGKSTQASLLADALTKLTGRTALLLKFPDRDTALGKCLDNYLKGDTDVD 85
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
A HLLF+ANRWE++ L + G + DRYS+SG+A++A
Sbjct: 86 THALHLLFTANRWEKQDELRSALSSGCCV-----------------VADRYSYSGIAYTA 128
Query: 127 AKEGMDIS--WCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQRKVAENY 183
AK S WC EKGL +PD V+ + L+ R G+G+ERYE DFQR+V ENY
Sbjct: 129 AKPPPTPSWQWCCAMEKGLVEPDLVICLTPEHFDHLKDRNGYGNERYETEDFQRRVLENY 188
Query: 184 EKL-KDNIWID 193
+L KD + D
Sbjct: 189 TRLAKDAQYTD 199
>gi|145503822|ref|XP_001437883.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405044|emb|CAK70486.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 100/166 (60%), Gaps = 23/166 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FIV EG D+ GK+TQ + L + L+ ++ + FPDR+ S G II +YL+ K ++
Sbjct: 6 RGLFIVLEGLDKCGKSTQTELLSEALD-----AKKMQFPDRSTSMGLIISDYLKGKRDIN 60
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
DQ HLLFSANRWE + T+ + + +GI + DRY++SGVAFS+
Sbjct: 61 DQVIHLLFSANRWEAQNTIIETLNKGINI-----------------VCDRYAYSGVAFSS 103
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ 172
AK G+ I WC Q + GLPKPD V+ + + L+ R FG ERYE+
Sbjct: 104 AK-GLPIQWCKQCDSGLPKPDLVIYLRAPIKQLKDRGDFGAERYEK 148
>gi|84995356|ref|XP_952400.1| thymidylate kinase [Theileria annulata strain Ankara]
gi|65302561|emb|CAI74668.1| thymidylate kinase, putative [Theileria annulata]
Length = 214
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 107/208 (51%), Gaps = 30/208 (14%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RG IVFEG DRSGK+TQ L L++ NI ++ ++FP +T TG ++ EYLR + E
Sbjct: 6 VLRGKLIVFEGIDRSGKSTQINLLSQKLSEENIKNEVLSFPYKTTPTGKLLREYLRNRDE 65
Query: 65 -LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+P QA HLLFSANRWE + KL++ G + DRY+FSG+A
Sbjct: 66 SIPKQALHLLFSANRWEVMNRIIKLLKSGTHV-----------------ITDRYAFSGIA 108
Query: 124 FSAAKE-----------GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ 172
+S E G+D +WC P+ G+ +PD V L E R FG E YE
Sbjct: 109 YSVGAEVRLLFYQVFPQGLDFNWCLIPDTGIVEPDVVFYMDLAPECSSARGNFGSEIYEN 168
Query: 173 TDFQRKVAENYEKLKD-NIWIDIDADKD 199
+ V E +++ + + W I A D
Sbjct: 169 LEHMENVYEVFKRFGNLSYWNIIKAHDD 196
>gi|303389072|ref|XP_003072769.1| thymidylate kinase [Encephalitozoon intestinalis ATCC 50506]
gi|303301911|gb|ADM11409.1| thymidylate kinase [Encephalitozoon intestinalis ATCC 50506]
Length = 191
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 24/207 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ +G FIVFEG DRSGKTT L D L+ + + FP+R+ + G +ID YLRK+I
Sbjct: 1 MTQGKFIVFEGLDRSGKTTIVDSLYDSLSSMG-DVRKMRFPNRSGNIGKVIDAYLRKEIN 59
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L ++ HLLFS +R+E++ T+ +L + I L C DRYS SG ++
Sbjct: 60 LENETIHLLFSGDRYEQKSTIEELRKSSILL----------------C--DRYSLSGASY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
S AK G+D+ WC + GLPKPD + + + + RRKGFG+E ++ F KV Y+
Sbjct: 102 SVAK-GLDLDWCVMVDSGLPKPDMTIFIDIPLDEISRRKGFGNEVHDHLPFLEKVLSAYK 160
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVK 208
L + N+ I +D I ++ IVK
Sbjct: 161 VLLKREKNVLI-VDGTFPISSIVEIVK 186
>gi|326925774|ref|XP_003209084.1| PREDICTED: thymidylate kinase-like isoform 2 [Meleagris gallopavo]
Length = 188
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 111/220 (50%), Gaps = 44/220 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ+++LV L + + FP+RT G +I YL ++ EL
Sbjct: 5 RGALIVLEGMDRAGKSTQSRRLVQALQAAGHRADLLRFPERTTEIGRLIGAYLSRERELE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE ++ + + QGITL + DRY+FSGVAF++
Sbjct: 65 DHVVHLLFSANRWEHVTSMKEKLHQGITLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE L+ E R FG ERYE FQ+KV +++ L
Sbjct: 108 AKE------------------------LSPEEAAARGNFGRERYENGPFQKKVLQSFHHL 143
Query: 187 ---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
K W +DA K I+ L +K + T+++ + PL
Sbjct: 144 MNEKTLNWKTMDASKSIEDLHREIKTVAEKTMQEVKDKPL 183
>gi|226468432|emb|CAX69893.1| deoxythymidylate kinase (thymidylate kinase) [Schistosoma
japonicum]
Length = 238
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 115/213 (53%), Gaps = 25/213 (11%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNK-NNIPSQFVNFPDRTISTGHIIDEYL 59
MA + RG F+V EG DR GKTTQA L L++ + V FP+R GH +D YL
Sbjct: 1 MAGSVSRGIFVVLEGADRVGKTTQASLLAKALSEITQKKTLSVKFPNRDTPLGHQLDAYL 60
Query: 60 RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
++ A HLLF+ANRWE++ + I GI++ DRY +
Sbjct: 61 GGNGDINSHALHLLFTANRWEKQSEIRNAISNGISV-----------------VADRYIY 103
Query: 120 SGVAFSAAK--EGMDISWCFQPEKGLPKPDAVL-LFKLNEEALQRRKGFGDERYEQTDFQ 176
SG+A++AAK + WC + EKGL + D V+ L N + L R G+G+E YE+ DFQ
Sbjct: 104 SGIAYTAAKLPPTPNWEWCCEMEKGLLEADLVICLTPENLDELNSRNGYGNECYEKDDFQ 163
Query: 177 RKVAENYEKLKDNIWID----IDADKDIDTLGL 205
++V ENY +L + +D + D+ D++GL
Sbjct: 164 KRVLENYVRLSKEVELDNSEWQNNDETGDSVGL 196
>gi|432107262|gb|ELK32676.1| Thymidylate kinase [Myotis davidii]
Length = 178
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 100/180 (55%), Gaps = 20/180 (11%)
Query: 47 RTISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEK 106
R+ G ++ YL KK E+ D + HLLFSANRWE+ P + + + QGITL +
Sbjct: 11 RSTEIGKLLSSYLEKKSEVEDHSVHLLFSANRWEQVPLIKERLSQGITLIV--------- 61
Query: 107 NLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFG 166
DRY+FSGVAF+ AKE + WC QP+ GLPKPD V+ +L + R GFG
Sbjct: 62 --------DRYAFSGVAFTNAKENFSLHWCKQPDVGLPKPDLVVFLQLRLAEVVERGGFG 113
Query: 167 DERYEQTDFQRKVAENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
ERYE FQ +V + Y +L ++ W +DA K I+ + ++ + D I+ + PL
Sbjct: 114 QERYEDGAFQERVLQCYHQLMEDRTLNWKVVDASKSIEDVHKEIRTLSEDIIQAAAQRPL 173
>gi|399217927|emb|CCF74814.1| unnamed protein product [Babesia microti strain RI]
Length = 197
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 24/208 (11%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPD------RTISTGHIID 56
S+I RG FIV EG DRSGK+T K L L + + FP R + G+I+
Sbjct: 2 SEIERGLFIVIEGLDRSGKSTVCKGLKQLLESEGKKVKLIGFPSNNFYIGRDSTIGNILS 61
Query: 57 EYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDR 116
EYL+ K +L Q AHLLFSA+RW+ + + + + +G L DR
Sbjct: 62 EYLKCKNDLLPQTAHLLFSADRWQAQNDIKQSLSEGFYL-----------------ICDR 104
Query: 117 YSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQ 176
Y++SGVA+S +G++ISW + GL PD + + +R GFG+ER E+ +
Sbjct: 105 YAYSGVAYSVGAQGLNISWAKHSDTGLVSPDLTFYLNIKSNIIAKRSGFGNERLEKINLM 164
Query: 177 RKVAENYEKLKDNI-WIDIDADKDIDTL 203
V Y+ +++ WI +DA++DI+ +
Sbjct: 165 ENVELAYQMFQNSPNWILVDANQDIEAI 192
>gi|156842253|ref|XP_001644495.1| hypothetical protein Kpol_529p17 [Vanderwaltozyma polyspora DSM
70294]
gi|156115139|gb|EDO16637.1| hypothetical protein Kpol_529p17 [Vanderwaltozyma polyspora DSM
70294]
Length = 217
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 103/178 (57%), Gaps = 26/178 (14%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR-KKI 63
+ RG I+ EG DR+GK+TQ L + LN + FP R G +I+ YL K
Sbjct: 1 MSRGRLILIEGLDRTGKSTQCDILCEKLN-----GTLMKFPQRETKIGQLINNYLTDKSF 55
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
++PDQ+ HLLFSANRWE EI+ + L N +++ DRY +SG+A
Sbjct: 56 KMPDQSIHLLFSANRWEMS-------------EIIQTELNNGRDV----ILDRYVYSGIA 98
Query: 124 FSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
+S+AK GMDI WC+Q +KGL +PD + +F N+ R+GFG+ERYE +FQ+ V
Sbjct: 99 YSSAKHISGMDIDWCYQCDKGLIRPD-ITVFLTNDSNNDDREGFGEERYENIEFQKVV 155
>gi|299745593|ref|XP_001831821.2| thymidylate kinase [Coprinopsis cinerea okayama7#130]
gi|298406658|gb|EAU90004.2| thymidylate kinase [Coprinopsis cinerea okayama7#130]
Length = 237
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 112/231 (48%), Gaps = 38/231 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKN-NIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
R FIV EG DRSGKTTQ L L ++ + FPDRT + G +ID YL+ EL
Sbjct: 8 RAPFIVIEGLDRSGKTTQTALLQSRLESELGASTKLMKFPDRTTTIGQMIDSYLKSDSEL 67
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D HLLFSANRWE T+ +L+ +G + DRY+FSG+AFS
Sbjct: 68 DDHVIHLLFSANRWELASTIERLLNEGTVV-----------------LCDRYAFSGIAFS 110
Query: 126 AAK------------EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQT 173
A+K + WC P+ GLP PD VL + E ++R G+G+ER+
Sbjct: 111 ASKVVPERSGSGESVPKLPFEWCRAPDIGLPAPDLVLFLDIAPEQAKQRGGYGEERWRVI 170
Query: 174 DFQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
D R V E + ++W + + +T G ++ IK SPLE
Sbjct: 171 DAGRDV----ESVAADLW-NAEESSTWNTRGFAEGLVMPPVIKH---SPLE 213
>gi|296206037|ref|XP_002750036.1| PREDICTED: thymidylate kinase isoform 2 [Callithrix jacchus]
Length = 188
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 114/223 (51%), Gaps = 50/223 (22%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLVD L ++ + FP+R+ G ++ YL KK +L
Sbjct: 5 RGALIVLEGMDRAGKSTQSRKLVDALCALGHRAELLRFPERSTEIGKLLSSYLEKKSDLE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAFS
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVM-----------------DRYAFSGVAFSG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE L DA +R FG ERYE FQ + + + +L
Sbjct: 108 AKE-------------LQLADAA-----------KRSAFGHERYENGAFQERALQCFHQL 143
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVI---DTIKKSQFSPL 223
+ W +DA K I+ + +DI++ D I+ + PL
Sbjct: 144 MRDTTVNWKMVDASKSIEA---VHEDILVLAEDAIRTATEKPL 183
>gi|241950051|ref|XP_002417748.1| dTMP kinase, putative; thymidylate kinase, putative [Candida
dubliniensis CD36]
gi|223641086|emb|CAX45461.1| dTMP kinase, putative [Candida dubliniensis CD36]
Length = 224
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 107/200 (53%), Gaps = 37/200 (18%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKI 63
+ RG I+ EG DRSGK+TQA L L+ PS+ + FPDR+ G +I+EYL K
Sbjct: 1 MARGQLILIEGLDRSGKSTQASILSTKLS----PSKLIKFPDRSTPIGKLINEYLTNKSF 56
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
L DQ+AHLLFSANRWE + L+ QG + + DRY +SG+A
Sbjct: 57 TLSDQSAHLLFSANRWELSQQIQDLLNQGYFIIL-----------------DRYIYSGIA 99
Query: 124 FSAAKEGM---------------DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDE 168
++ AK ++ W P+KGLPKPD L L+ E + +RKG+GDE
Sbjct: 100 YTLAKNDFHDETISQGKNKQQLNNVDWLLSPDKGLPKPDLTLFLTLDLEEISKRKGWGDE 159
Query: 169 RYEQTDFQRKVAENYEKLKD 188
RYE FQ KV + + ++ D
Sbjct: 160 RYELQQFQAKVKQCFLEILD 179
>gi|401826104|ref|XP_003887146.1| thymidylate kinase [Encephalitozoon hellem ATCC 50504]
gi|392998304|gb|AFM98165.1| thymidylate kinase [Encephalitozoon hellem ATCC 50504]
Length = 191
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 113/207 (54%), Gaps = 24/207 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ G F+VFEG DRSGKTT L + L S+ V FP+R G IDEYL+KKI
Sbjct: 1 MSEGKFVVFEGLDRSGKTTVVNSLYESLLPIASVSK-VRFPNRNGCIGKTIDEYLQKKIT 59
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L + HLLF+A+R+E + + L + I L C DRYS SGVA+
Sbjct: 60 LKSETIHLLFAADRYEHKAMIEDLRKDSIIL----------------C--DRYSMSGVAY 101
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
SAAK G+D++WC E LPKPD + + + + RRKGFG+E ++ F +KV Y+
Sbjct: 102 SAAK-GLDLNWCAMSESLLPKPDLTVFIDIPMDEICRRKGFGEEIFDNIAFLKKVRSAYQ 160
Query: 185 KL---KDNIWIDIDADKDIDTLGLIVK 208
L + N+ I +D ++ + IVK
Sbjct: 161 TLLKEEKNVLI-VDGTLSVNEIVKIVK 186
>gi|396081269|gb|AFN82887.1| thymidylate kinase [Encephalitozoon romaleae SJ-2008]
Length = 191
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 118/210 (56%), Gaps = 30/210 (14%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVN---FPDRTISTGHIIDEYLRK 61
+ +G F+VFEG DRSGKTT +V+ L ++ +P+ VN FP+R G +IDEYL+K
Sbjct: 1 MSKGKFVVFEGLDRSGKTT----IVNTLYESLLPTVSVNKIRFPNRNGCVGKVIDEYLQK 56
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
KI L ++ HLLFSA+R+E + + +L + I L C DRYS SG
Sbjct: 57 KISLKNETIHLLFSADRYEHKAMIEELRKDSIVL----------------C--DRYSMSG 98
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
VA+S AK G+ + WC E LPKPD + + + + RRK FG E ++ F +KV
Sbjct: 99 VAYSVAK-GLSLDWCAMSESLLPKPDLTVFIDVPMDEICRRKEFGKEIHDSITFLKKVFL 157
Query: 182 NYEKL---KDNIWIDIDADKDIDTLGLIVK 208
Y+ L + N++I +D ID + IVK
Sbjct: 158 AYQILLKEEKNVFI-VDGTLPIDEIIEIVK 186
>gi|426339165|ref|XP_004033530.1| PREDICTED: thymidylate kinase isoform 2 [Gorilla gorilla gorilla]
Length = 188
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 113/220 (51%), Gaps = 44/220 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGYRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE L DA +R FG ERYE FQ + + +L
Sbjct: 108 AKE-------------LQLADAA-----------KRGAFGHERYENGAFQERALRCFHQL 143
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K I+ + ++ + D I+ + PL
Sbjct: 144 MKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPL 183
>gi|16768438|gb|AAL28438.1| GM04626p [Drosophila melanogaster]
Length = 171
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 21/187 (11%)
Query: 42 VNFPDRTISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSS 101
+NFP+R+ S G +I+ YL +LPD+ HL+FSANRWE + + + +G TL +
Sbjct: 1 MNFPERSSSIGQVINSYLTNSKDLPDEVIHLMFSANRWEHINQVKEKLLEGTTLVV---- 56
Query: 102 LENEKNLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQR 161
DRYSFSGVA+SAAK G+D WC+ PE+GL KPDAV + L
Sbjct: 57 -------------DRYSFSGVAYSAAK-GLDFDWCYAPERGLIKPDAVFYLRAPPNDLTH 102
Query: 162 RKGFGDERYEQTDFQRKVAENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKS 218
R +G ERYE+ +FQ +VAE + ++ + + + DA + ++ L + I + + K
Sbjct: 103 RGQYGKERYEKVEFQGRVAEVFNRICSKEGSYFHQFDARQSVEDLHAQIASITEELLPKV 162
Query: 219 QFSPLES 225
PL++
Sbjct: 163 ATRPLDT 169
>gi|330916235|ref|XP_003297345.1| hypothetical protein PTT_07709 [Pyrenophora teres f. teres 0-1]
gi|311330039|gb|EFQ94563.1| hypothetical protein PTT_07709 [Pyrenophora teres f. teres 0-1]
Length = 155
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 94/171 (54%), Gaps = 19/171 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RG IVFEG DR+GK+TQ +KLV+ L + + + + FPDRT G +I+ YL E
Sbjct: 1 MTRGKLIVFEGLDRAGKSTQCQKLVEDLQNDGMKVRHMRFPDRTTPIGQMINSYLSGDSE 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D HLLFSANRWE ++ + G T+ I DRY +SG +
Sbjct: 61 QEDHVIHLLFSANRWEAANSIQADLTAGTTIII-----------------DRYYYSGCVY 103
Query: 125 SAAKEGMDIS--WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQT 173
SAAK+ D+S WC PE GLP+PD + ++ E +R G+G E+ +T
Sbjct: 104 SAAKQKHDMSLEWCRNPELGLPRPDLCIFLDISAEDAAKRGGYGTEKRART 154
>gi|259013537|ref|NP_001158503.1| thymidylate kinase isoform 2 [Homo sapiens]
gi|114584337|ref|XP_001161587.1| PREDICTED: uncharacterized protein LOC744320 isoform 1 [Pan
troglodytes]
gi|397483841|ref|XP_003813099.1| PREDICTED: thymidylate kinase [Pan paniscus]
gi|219521040|gb|AAI71902.1| LOC727761 protein [Homo sapiens]
gi|410208478|gb|JAA01458.1| deoxythymidylate kinase (thymidylate kinase) [Pan troglodytes]
gi|410248950|gb|JAA12442.1| deoxythymidylate kinase (thymidylate kinase) [Pan troglodytes]
gi|410330051|gb|JAA33972.1| deoxythymidylate kinase (thymidylate kinase) [Pan troglodytes]
Length = 188
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 113/220 (51%), Gaps = 44/220 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE L DA +R FG ERYE FQ + + +L
Sbjct: 108 AKE-------------LQLADAA-----------KRGAFGHERYENGAFQERALRCFHQL 143
Query: 187 -KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
KD W +DA K I+ + ++ + D I+ + PL
Sbjct: 144 MKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPL 183
>gi|410969809|ref|XP_003991384.1| PREDICTED: uncharacterized protein LOC101097578 [Felis catus]
Length = 357
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 97/180 (53%), Gaps = 20/180 (11%)
Query: 47 RTISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEK 106
R+ G ++ YL KK E+ D + HLLFSANRWE+ P + K + QGITL +
Sbjct: 190 RSTEIGKLLSSYLEKKSEVEDHSVHLLFSANRWEQVPLIKKKLSQGITLVV--------- 240
Query: 107 NLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFG 166
DRY+FSGVAF++AKE + WC QP+ GLPKPD V+ +L R FG
Sbjct: 241 --------DRYAFSGVAFTSAKENFSLDWCKQPDVGLPKPDLVVFLQLRLAEAATRGEFG 292
Query: 167 DERYEQTDFQRKVAENYEKLKDN---IWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
ERYE +FQ + + +L + W +DA K I+ + + + +DTI+ PL
Sbjct: 293 RERYENGNFQERALRRFHQLMADETLNWKMVDASKSIEDVHKEIHALSVDTIRAVTQRPL 352
>gi|395528690|ref|XP_003766460.1| PREDICTED: thymidylate kinase isoform 2 [Sarcophilus harrisii]
Length = 188
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 44/220 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ +KLV L ++ ++ + FP+R+ G ++ YL KK +
Sbjct: 5 RGALIVLEGMDRAGKSTQCRKLVTTLLESGHRAELLRFPERSTEIGKLLSAYLEKKSNME 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF++
Sbjct: 65 DHTVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN-YEK 185
AKE L+ + +R FG ERYE FQ K + Y+
Sbjct: 108 AKE------------------------LSSQEAAKRGDFGTERYENNAFQEKALQCFYQL 143
Query: 186 LKDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+KD+ W I+A + I+ L + + +TI+ Q +P+
Sbjct: 144 MKDDSLNWKTINASQSIEDLHKEIYSLAEETIQMVQETPM 183
>gi|336260748|ref|XP_003345167.1| hypothetical protein SMAC_09145 [Sordaria macrospora k-hell]
gi|380088368|emb|CCC13744.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 279
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 89/160 (55%), Gaps = 19/160 (11%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
I RGA IV EG DRSGKTTQ K L + K + + FPDRT G +ID YL+ + +
Sbjct: 24 IVRGALIVVEGLDRSGKTTQVKLLEERFRKEGKRVKTMRFPDRTTPIGQMIDSYLKSQAQ 83
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ D HLLFSANRWE T+T + G TL + DRY +SG+ +
Sbjct: 84 MEDHVIHLLFSANRWEAVKTITTELSLGTTLIL-----------------DRYYYSGIVY 126
Query: 125 SAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR 162
SAAK+ + +SW PE GLP+PD VL L+EE + R
Sbjct: 127 SAAKQNPSLSLSWARAPEIGLPRPDLVLFLDLDEEQARLR 166
>gi|302563323|ref|NP_001181704.1| thymidylate kinase [Macaca mulatta]
Length = 188
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 44/220 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHAVHLLFSANRWEQVPLIKEKLSQGVTLIV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE L DA +R +G ERYE FQ + + + +L
Sbjct: 108 AKE-------------LQLADAA-----------KRGAYGHERYENRAFQERALQCFHQL 143
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ W +DA K I+ + ++ + D I + PL
Sbjct: 144 MRDTTLNWKMVDASKSIEAVHEDIRVLSEDAIHTATEKPL 183
>gi|291415048|ref|XP_002723765.1| PREDICTED: thymidylate kinase isoform 2 [Oryctolagus cuniculus]
Length = 188
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 111/220 (50%), Gaps = 44/220 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV L ++ + FP+R+ G ++ YL KK E+
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVAALRAAGHRAELLRFPERSTEIGKLLSSYLEKKSEVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF++
Sbjct: 65 DHSVHLLFSANRWEQVPFIKEKLSQGVTLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE KL E A R FG ERYE FQ + + + +L
Sbjct: 108 AKE----------------------LKLAEAA--SRGEFGCERYESRAFQERALQGFHQL 143
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ W +DA K I+ + ++ + D I + PL
Sbjct: 144 MRDPSLNWKMVDASKSIEDVHEEIRALSEDAILSAAQRPL 183
>gi|402889936|ref|XP_003908253.1| PREDICTED: thymidylate kinase [Papio anubis]
Length = 209
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 112/220 (50%), Gaps = 44/220 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL KK ++
Sbjct: 26 RGALIVLEGMDRAGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSDVE 85
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 86 DHAVHLLFSANRWEQVPLIKEKLSQGVTLIV-----------------DRYAFSGVAFTG 128
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN-YEK 185
AKE L DA +R +G ERYE FQ + + Y+
Sbjct: 129 AKE-------------LQLADAA-----------KRGAYGHERYENRAFQERALQCFYQL 164
Query: 186 LKDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
++D W +DA K I+ + + + D I+ + PL
Sbjct: 165 MRDTTLNWKMVDASKSIEAVHEDICALSEDAIRTATEKPL 204
>gi|444518590|gb|ELV12253.1| Thymidylate kinase [Tupaia chinensis]
Length = 183
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 98/180 (54%), Gaps = 20/180 (11%)
Query: 47 RTISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEK 106
R+ G ++ YL K+ E+ D + HLLFSANRWER P + + + QG+TL +
Sbjct: 16 RSTEIGRLLSAYLEKRSEVEDHSVHLLFSANRWERVPLIKEKLSQGVTLVV--------- 66
Query: 107 NLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFG 166
DRY+FSGVAF++AKE + WC QP+ GLPKPD VL +L R FG
Sbjct: 67 --------DRYAFSGVAFTSAKENFSLEWCKQPDVGLPKPDLVLFLQLQLADAAARGQFG 118
Query: 167 DERYEQTDFQRKVAENYEKLKDN---IWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
ERYE FQ +V + + +L ++ W +DA + I+ + ++ + + I + PL
Sbjct: 119 RERYESGPFQERVLQRFHQLMEDTSVTWKVVDASRSIEDVHQEIRVLSEEAIHTAAQRPL 178
>gi|385301485|gb|EIF45673.1| thymidylate kinase [Dekkera bruxellensis AWRI1499]
Length = 206
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 107/194 (55%), Gaps = 21/194 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHII-DEYLRKKIEL 65
R I EG DRSGK+TQ KLV L + + + FP+RT + G +I KK +L
Sbjct: 2 RAPLIAIEGLDRSGKSTQTLKLVRRLQDSXRSVKLLKFPERTTAIGKLIDXYLKDKKXKL 61
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D++ HLLFSANRWE + + L+ + + DRY +SGVA+S
Sbjct: 62 SDESVHLLFSANRWELQDKIIBLLTNQSXVVV-----------------DRYVYSGVAYS 104
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGDERYEQTDFQRKVAENYE 184
AK G+ WC P+ G+PKPD + K N+ + R GFG+ERYE+++FQ+KV ++
Sbjct: 105 GAK-GLKFQWCLNPDLGMPKPDVTIFLKFNDMLQVTTRSGFGEERYEESEFQKKVCAQFK 163
Query: 185 KLKD-NIWIDIDAD 197
K + + W +I+ D
Sbjct: 164 KFEGFSEWHNINVD 177
>gi|406604939|emb|CCH43612.1| hypothetical protein BN7_3165 [Wickerhamomyces ciferrii]
Length = 181
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 114/220 (51%), Gaps = 50/220 (22%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGA I+ EG DR+GKTTQ ++LV+ L K + + FP
Sbjct: 1 MSRGALILIEGLDRAGKTTQTERLVERLKKEGKDVELIKFP------------------- 41
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
AHLLFSANRWE + + QG + + DRY +SGVA+
Sbjct: 42 -----AHLLFSANRWELANVIKDKLTQGKYIVL-----------------DRYVYSGVAY 79
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G+D WC P+ GLPKPD L KLN+ + R+GFGDERYE +FQ KV + +E
Sbjct: 80 TAAK-GLDHQWCLNPDIGLPKPDLTLFLKLNDSS--NREGFGDERYEVKEFQLKVRQQFE 136
Query: 185 KL-KDNIWIDIDAD-KDIDTLGLIVKDIVIDTIKKSQFSP 222
K ++ W I D K+I+ V++ + + ++K F P
Sbjct: 137 KFYNESNWNTIIVDGKNIEQ----VENEIWNLLEKKLFEP 172
>gi|19074200|ref|NP_584806.1| THYMIDYLATE KINASE [Encephalitozoon cuniculi GB-M1]
gi|19068842|emb|CAD25310.1| THYMIDYLATE KINASE [Encephalitozoon cuniculi GB-M1]
gi|449329035|gb|AGE95310.1| thymidylate kinase [Encephalitozoon cuniculi]
Length = 191
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 95/180 (52%), Gaps = 20/180 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G F+VFEG DRSGKTT L + L +P+ + FP+R+ G IID YL+KK L
Sbjct: 3 KGKFVVFEGLDRSGKTTIVGSLYESLLPI-VPTSKIRFPNRSGPVGKIIDGYLQKKTNLE 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ HLLFSA+R+E H + E D DRYS SG+A+S
Sbjct: 62 SETIHLLFSADRYE------------------HRLMIEELRRDTIILCDRYSMSGIAYSV 103
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+ + WC E LPKPD + + + + RRKGFG E ++ F +KV Y+ L
Sbjct: 104 AK-GLSLDWCIASEALLPKPDLTIFIDVPMDEICRRKGFGTEIHDTVPFLKKVLSAYQAL 162
>gi|297669949|ref|XP_002813146.1| PREDICTED: thymidylate kinase isoform 2 [Pongo abelii]
Length = 188
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 44/220 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF+
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-----------------DRYAFSGVAFTG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE L DA +R FG ERYE FQ + + +L
Sbjct: 108 AKE-------------LQLADAA-----------KRGAFGHERYENRAFQERALWCFHQL 143
Query: 187 KDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ W +DA K I+ + ++ + D I + PL
Sbjct: 144 MRDTTLNWKMVDASKSIEAVHEDIRMLSEDVICTATEKPL 183
>gi|441669653|ref|XP_003282020.2| PREDICTED: thymidylate kinase [Nomascus leucogenys]
Length = 169
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 96/175 (54%), Gaps = 20/175 (11%)
Query: 52 GHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG 111
G ++ YL+KK ++ D + HLLFSANRWE+ P + + + QG+TL +
Sbjct: 7 GKLLSSYLQKKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVV-------------- 52
Query: 112 CTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYE 171
DRY+FSGVAF+ AKE + WC QP+ GLPKPD VL +L +R FG ERYE
Sbjct: 53 ---DRYAFSGVAFTGAKENFSLDWCKQPDAGLPKPDLVLFLQLELADAAKRGAFGHERYE 109
Query: 172 QTDFQRKVAENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
FQ + + + +L + W +DA K I+ + ++ + D I+ + PL
Sbjct: 110 NGAFQERALQCFHQLMRDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRAATERPL 164
>gi|308198161|ref|XP_001387114.2| thymidylate kinase [Scheffersomyces stipitis CBS 6054]
gi|149389058|gb|EAZ63091.2| thymidylate kinase [Scheffersomyces stipitis CBS 6054]
Length = 229
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 109/203 (53%), Gaps = 42/203 (20%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKI 63
+ RG I+ EG DRSGK+TQ+ L + L K S+ + FPDR+ S G II+EYL
Sbjct: 1 MGRGQLILIEGLDRSGKSTQSAILAEKLGK----SKLLKFPDRSTSVGKIINEYLTNSSF 56
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+L DQ AHLLFSANRWE + +L+ G + + DRY +SG+A
Sbjct: 57 QLSDQTAHLLFSANRWELNNEIIELLNDGYFVIL-----------------DRYIYSGIA 99
Query: 124 FSAAK-------------------EGM-DISWCFQPEKGLPKPDAVLLFKLNEEALQRRK 163
+S AK E M D+ W + P+KGLPKPD L L+ L +RK
Sbjct: 100 YSLAKYEYSKTANNSGVIASTTASEQMGDVEWLYGPDKGLPKPDLTLFLTLDLVELGKRK 159
Query: 164 GFGDERYEQTDFQRKVAENYEKL 186
G+G+ERYE +FQ+ V ++ ++
Sbjct: 160 GWGNERYELEEFQKIVKSSFLRI 182
>gi|348577657|ref|XP_003474600.1| PREDICTED: thymidylate kinase-like isoform 3 [Cavia porcellus]
Length = 188
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 44/198 (22%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV L ++ + FPDR+ G ++ YL KK EL
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVSALCAAGHRAELLRFPDRSTEIGKLLSSYLEKKSELE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + HLLFSANRWE+ P + + + QG+TL + DRY+FSGVAF++
Sbjct: 65 DHSVHLLFSANRWEQVPLIKEKLYQGVTLVV-----------------DRYAFSGVAFTS 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AKE L DA R FG ERYE+ FQ + +++L
Sbjct: 108 AKE-------------LQLTDAAT-----------RGEFGHERYEEKTFQERALCGFQQL 143
Query: 187 -KDNI--WIDIDADKDID 201
+D+ W +DA + I+
Sbjct: 144 MRDSTLNWKVVDASRRIE 161
>gi|347838598|emb|CCD53170.1| similar to thymidylate kinase [Botryotinia fuckeliana]
Length = 221
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 117/242 (48%), Gaps = 59/242 (24%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
A I RG+FI+ EG DR+GKTTQ KKL D L + + + FPD++I
Sbjct: 15 ADPISRGSFILIEGLDRAGKTTQVKKLCDKLYASGRNVKLMRFPDQSI------------ 62
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
HLLFSANRWE+ + LI QG T+ DRY +SG
Sbjct: 63 ---------HLLFSANRWEKAQEIRDLIAQGYTI-----------------VCDRYYYSG 96
Query: 122 VAFSAAKEGMD------ISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDF 175
+ ++++K +D + WC PE GLP PD V+ L E ++R G+GDE+YE +
Sbjct: 97 MIYTSSKYSIDSPNHLSLEWCKNPEIGLPMPDRVIFLDLEPEEAEKRGGYGDEKYETREM 156
Query: 176 QRKVAENYEKLKDN----------IWIDIDADKDIDTLG----LIVKDIVIDTIKKSQFS 221
QR+V + L+++ I IDA +D + VKDIV + I+K +
Sbjct: 157 QRRVRNGFLSLQNSAVPGFEQEQRIMKAIDAGDGLDEVAEKIWHAVKDIV-EQIEKGEHG 215
Query: 222 PL 223
L
Sbjct: 216 EL 217
>gi|194211528|ref|XP_001497832.2| PREDICTED: thymidylate kinase-like [Equus caballus]
Length = 218
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 101/187 (54%), Gaps = 20/187 (10%)
Query: 40 QFVNFPDRTISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMH 99
Q +R+ G ++ YL KK E+ + + HLLFSANRWE+ P + + + QG+TL +
Sbjct: 44 QLTTTLERSTDIGKLLSSYLEKKNEMENHSVHLLFSANRWEQVPLIKEKLSQGVTLIV-- 101
Query: 100 SSLENEKNLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEAL 159
DRY+FSGVA+++AK + WC QP+ GLPKPD V+ +L
Sbjct: 102 ---------------DRYAFSGVAYTSAKADFSLDWCKQPDVGLPKPDLVVFLQLQLAEA 146
Query: 160 QRRKGFGDERYEQTDFQRKVAENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIK 216
R FG ERYE FQ V++ + +L + W +DA + I+ + ++++ DTI+
Sbjct: 147 AMRGEFGRERYENRTFQESVSQRFHQLMGDTTLNWKMVDASQSIEDVHKEIRELSEDTIQ 206
Query: 217 KSQFSPL 223
+ PL
Sbjct: 207 AAAQRPL 213
>gi|281340989|gb|EFB16573.1| hypothetical protein PANDA_012286 [Ailuropoda melanoleuca]
Length = 138
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 82/143 (57%), Gaps = 17/143 (11%)
Query: 44 FPDRTISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLE 103
F +R+ G ++ YL KK E+ D + HLLFSANRWE+ P + K + QGITL +
Sbjct: 3 FLERSTEIGKLLSSYLEKKSEVEDHSVHLLFSANRWEQVPLIKKKLSQGITLVV------ 56
Query: 104 NEKNLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRK 163
DRY+FSGVAF++AKE + WC QP+ GLPKPD V+ +L RR
Sbjct: 57 -----------DRYAFSGVAFTSAKENFSLDWCKQPDVGLPKPDLVVFLQLRLAEAARRG 105
Query: 164 GFGDERYEQTDFQRKVAENYEKL 186
FG ERYE +FQ + + +L
Sbjct: 106 EFGRERYENGNFQERALHRFHQL 128
>gi|402466345|gb|EJW01855.1| thymidylate kinase [Edhazardia aedis USNM 41457]
Length = 199
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 117/216 (54%), Gaps = 29/216 (13%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFV-NFPDRTISTGHIIDEYLRKKIELP 66
G FIV EG D+SGK+T K L++ L + + +FP+R TG +ID+YL KKI+L
Sbjct: 7 GKFIVIEGIDKSGKSTLCKNLIEMLAHGTKQTVLLKSFPNRDSITGKVIDKYLNKKIQLN 66
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
Q HLLFSANRWE E + K ++ I + C DRY SG+A++A
Sbjct: 67 PQTIHLLFSANRWE-EVQVYKDLKNKIII----------------C--DRYFLSGIAYTA 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK G+++ W P+ GLP PD ++ + +R G+GDE+Y+ +Q K Y+ L
Sbjct: 108 AK-GINLEWAKAPDMGLPVPDLIVFLDITAMETAKRSGYGDEKYDSICYQSKC---YDLL 163
Query: 187 KDNIW-----IDIDADKDIDTLGLIVKDIVIDTIKK 217
K ++ + IDA+ D L V ++++D K
Sbjct: 164 KKMVFEHPNGVVIDANIKEDHLCKKVLNLILDLFDK 199
>gi|159109111|ref|XP_001704822.1| CDC8 [Giardia lamblia ATCC 50803]
gi|157432895|gb|EDO77148.1| CDC8 [Giardia lamblia ATCC 50803]
Length = 254
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 18/182 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RG F+V EG DR+GK T ++V L + FPDRT +G ++D +L+++++
Sbjct: 29 VTRGLFVVIEGLDRAGKDTMIGQVVALLRQAGESVVVQAFPDRTTKSGAVLDRFLQRELD 88
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L D H L++ NR E E L + G T+ RY++SGVA+
Sbjct: 89 LSDWDCHRLYAENRKELEEVLCNTLLAGTTV-----------------ICSRYAYSGVAY 131
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G D+ C + +KGL +PD V+ ++ A+ R GFG ERYE DFQ KV ++
Sbjct: 132 TAAK-GHDMRRCMEADKGLLRPDLVIFLDVDASAVAVRTGFGKERYETQDFQVKVYTAFQ 190
Query: 185 KL 186
L
Sbjct: 191 TL 192
>gi|253744823|gb|EET00963.1| CDC8 [Giardia intestinalis ATCC 50581]
Length = 264
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 97/182 (53%), Gaps = 18/182 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
I RG IV EG DR+GK T + L++ L + FPDRT +G I+D +LR++I+
Sbjct: 39 IGRGLLIVVEGLDRAGKDTLIEHLMNLLEQAGESVMVQAFPDRTTKSGIILDRFLRREID 98
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L D H L++ NR E E TL K + G T+ RY++SGVA+
Sbjct: 99 LSDWDCHELYAENRRELEETLCKALLSGTTV-----------------ICSRYAYSGVAY 141
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G DI C + + GL +PD ++ ++ + R FG ERYE DFQ KV ++
Sbjct: 142 TAAK-GHDIRKCMKADMGLLRPDLIVFLDVDARTVAMRNSFGKERYETHDFQVKVYTAFQ 200
Query: 185 KL 186
L
Sbjct: 201 TL 202
>gi|354474224|ref|XP_003499331.1| PREDICTED: thymidylate kinase-like [Cricetulus griseus]
Length = 295
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 101/185 (54%), Gaps = 20/185 (10%)
Query: 43 NFPDRTISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSL 102
+R+ G ++ YL KK +L D + HLLFSANRWE+ P + + QG+TL +
Sbjct: 124 GLAERSTEIGKLLSSYLEKKTDLEDHSVHLLFSANRWEQVPLIKAKLNQGVTLVL----- 178
Query: 103 ENEKNLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR 162
DRY+FSGVAF++AKE + WC QP+ GLPKPD +L +L R
Sbjct: 179 ------------DRYAFSGVAFTSAKENFSLDWCKQPDVGLPKPDLILFLQLQLLDAAAR 226
Query: 163 KGFGDERYEQTDFQRKVAENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
FG ERYE FQ +V +++L K+ W +DA K I+ + ++ + D I+ +
Sbjct: 227 GEFGLERYETGTFQEQVLLCFQQLMKDKNLNWKVVDASKSIEDVHEEIRVLSEDAIRSAA 286
Query: 220 FSPLE 224
SPLE
Sbjct: 287 QSPLE 291
>gi|308160228|gb|EFO62726.1| CDC8 [Giardia lamblia P15]
Length = 263
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 97/182 (53%), Gaps = 18/182 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
I RG FIV EG DR+GK T +LV L + FPDRT +G I+D +LR++++
Sbjct: 38 ITRGLFIVIEGLDRAGKDTMIDQLVALLKQTGESVMVQAFPDRTTKSGIILDRFLRRELD 97
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L D H L++ NR E E L + G T+ RY++SGVA+
Sbjct: 98 LSDWDCHKLYAENRKELEEGLCNTLLTGTTV-----------------ICSRYAYSGVAY 140
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
+AAK G DI C + +KGL +PD V+ ++ + + R FG ERYE +FQ KV ++
Sbjct: 141 TAAK-GHDIRRCMEADKGLLRPDLVVFLDVDAKTVALRTDFGKERYETQNFQIKVYAAFQ 199
Query: 185 KL 186
L
Sbjct: 200 TL 201
>gi|345107340|ref|YP_004821505.1| thymidylate kinase [Yoka poxvirus]
gi|344267414|gb|AEN03741.1| thymidylate kinase [Yoka poxvirus]
Length = 207
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 110/213 (51%), Gaps = 24/213 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIV EG D+SGKTTQ ++ ++ N ++NFP R +G +I+ YL +K
Sbjct: 3 RGAFIVIEGIDKSGKTTQCINAINDVSSINKQITYINFPQRNTISGKMINNYLTRKKTYN 62
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+LFS NRWE + ++ GI++ +DRYSFSGVA+SA
Sbjct: 63 SHIISMLFSENRWEFSQFIKDRLKNGISV-----------------ISDRYSFSGVAYSA 105
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
A G I E GLPKPD V+ L+ + K G+E YE+ +FQ+KV ++ L
Sbjct: 106 AN-GFSIEVSKSYESGLPKPDMVIF--LDSGTTELEKNIGEELYEEIEFQKKVLVEFKNL 162
Query: 187 ----KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
KD W I +D D ++K++V + I
Sbjct: 163 IKNEKDINWKVIPSDLTYDEKKQLIKNLVFECI 195
>gi|402074607|gb|EJT70116.1| thymidylate kinase [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 249
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 19 SGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQAAHLLFSANR 78
SGKTTQ K L + + + FPDRT G +ID YL+ ++++ D HLLFSANR
Sbjct: 24 SGKTTQVKLLEQRFVELGRKVKVMRFPDRTTPIGEMIDGYLKSQVDMDDHVIHLLFSANR 83
Query: 79 WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK--EGMDISWC 136
WE T+T L+ G T+ DRY SG+ +SAAK + + W
Sbjct: 84 WEAVKTITSLLASGTTV-----------------VCDRYYHSGIVYSAAKGNPALTLPWA 126
Query: 137 FQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
PE GLP+PD VL L+E + R G+G E YE+ QR+V E + L
Sbjct: 127 RAPEVGLPRPDLVLFLDLDEGQARARGGWGGEAYERAGMQRRVRELFWGL 176
>gi|410493634|ref|YP_006908572.1| Thymidylate Kinase [Epinotia aporema granulovirus]
gi|354805068|gb|AER41490.1| Thymidylate Kinase [Epinotia aporema granulovirus]
Length = 224
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 44/242 (18%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G + FEG DRSGK++Q +L + P+ FPDR+ TG I++++L + +E D
Sbjct: 2 GFIVAFEGLDRSGKSSQVARLAQTWHG---PTTTFKFPDRSTPTGQILNKHLTEGVEDCD 58
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ HLLF ANRWE+ + +L + L I+ DRY +SG+A+SAA
Sbjct: 59 EYIHLLFCANRWEQMKKINQLAAEESHLVII----------------DRYLYSGIAYSAA 102
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLK 187
K G+D +C G +PD L+F +N R G+G+E YE+ FQRKV E Y+K+
Sbjct: 103 K-GLDFDFCVNTNWGQAEPD--LVFFMNYVPPSTRTGYGEEIYEREMFQRKVFEQYKKIA 159
Query: 188 DNIWIDIDADKDIDT----------------------LGLIVKDIVIDTIKKSQFSPLES 225
W+ + + +T LGL V ++ KS FS +
Sbjct: 160 TKTWVMLPEGTEEETWNNIWTQLNKRLLSHYLMSIILLGLCVPVVIRLPCIKSTFSSMSL 219
Query: 226 NK 227
+K
Sbjct: 220 HK 221
>gi|321456428|gb|EFX67536.1| hypothetical protein DAPPUDRAFT_63855 [Daphnia pulex]
Length = 195
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 95/188 (50%), Gaps = 18/188 (9%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVD-YLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI 63
I RGA IV E CDRSGK TQ +K+ +L ++N + + FPD + I Y+
Sbjct: 2 IKRGALIVLERCDRSGKPTQCQKVKHLWLQESNKEAHLMRFPDEIVCDQPAISSYICYAK 61
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
A L SA P + KL+++G + + DRYS+SG+A
Sbjct: 62 PKDGTATELFTSARLLSIRPDIKKLLQKGTNVIV-----------------DRYSYSGIA 104
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
FSAAK MD+ WC Q + GL KPD V+ ++ + R +G ERYE + Q+ V NY
Sbjct: 105 FSAAKPNMDLRWCQQSDSGLLKPDLVIFLDIDPVEAETRGQYGSERYENLEMQKVVRSNY 164
Query: 184 EKLKDNIW 191
KL+D W
Sbjct: 165 LKLQDESW 172
>gi|429965021|gb|ELA47018.1| thymidylate kinase [Vavraia culicis 'floridensis']
Length = 231
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 100/180 (55%), Gaps = 21/180 (11%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKN--NIPSQFVNFPDRTISTGHIIDEYL 59
A + FIV EG DRSGK+T +KLV+ L + N +N+PDRT + G +++ YL
Sbjct: 33 AHMAGKRKFIVIEGIDRSGKSTLCRKLVERLKETATNSSPVLINYPDRTTTIGKLVNLYL 92
Query: 60 RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
+K+I + +HLLFSANRWE+ + KL++ + + C DRY +
Sbjct: 93 KKQITFNKETSHLLFSANRWEKNEEVKKLLKDHVVI----------------C--DRYFY 134
Query: 120 SGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
SG+A+S A G+D W +P++GL +PD ++ + R+ FG+E Y+ D Q K+
Sbjct: 135 SGIAYSIAL-GVDEKWAREPDRGLIEPDILVFLDVQPHRTVTREDFGEEIYDNLDIQEKI 193
>gi|440494619|gb|ELQ76984.1| Thymidylate kinase/adenylate kinase [Trachipleistophora hominis]
Length = 228
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 21/172 (12%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQ--FVNFPDRTISTGHIIDEYLRKKIELPD 67
FIV EG DRSGK+T + LV L + + S +N+PDRT + G +++ YL+K++
Sbjct: 38 FIVIEGIDRSGKSTLCQGLVQKLKNSAVNSNPVLINYPDRTTAIGKLVNLYLKKELTFNK 97
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ +HLLFSANRWE+ + +L++ I + C DRY +SG+A+S A
Sbjct: 98 ETSHLLFSANRWEKNEEVKRLLQDHIVI----------------C--DRYFYSGIAYSIA 139
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
G D W +P+KGL +PD ++ + RK FGDE Y+ D Q K+
Sbjct: 140 L-GTDEKWAHEPDKGLVEPDILVFLDVPPYRTSTRKDFGDEIYDNLDIQEKI 190
>gi|255033412|gb|ACT99397.1| unknown [Lactuca sativa]
gi|255033414|gb|ACT99398.1| unknown [Lactuca sativa]
gi|255033416|gb|ACT99399.1| unknown [Lactuca sativa]
gi|255033418|gb|ACT99400.1| unknown [Lactuca sativa]
gi|255033424|gb|ACT99403.1| unknown [Lactuca sativa]
gi|255033426|gb|ACT99404.1| unknown [Lactuca sativa]
gi|255033428|gb|ACT99405.1| unknown [Lactuca sativa]
gi|255033430|gb|ACT99406.1| unknown [Lactuca sativa]
gi|255033434|gb|ACT99408.1| unknown [Lactuca sativa]
gi|255033436|gb|ACT99409.1| unknown [Lactuca sativa]
gi|255033440|gb|ACT99411.1| unknown [Lactuca sativa]
gi|255033442|gb|ACT99412.1| unknown [Lactuca sativa]
gi|255033444|gb|ACT99413.1| unknown [Lactuca sativa]
gi|255033446|gb|ACT99414.1| unknown [Lactuca sativa]
gi|255033454|gb|ACT99418.1| unknown [Lactuca sativa]
gi|255033466|gb|ACT99424.1| unknown [Lactuca sativa]
gi|255033468|gb|ACT99425.1| unknown [Lactuca sativa]
gi|255033476|gb|ACT99429.1| unknown [Lactuca sativa]
gi|255033482|gb|ACT99432.1| unknown [Lactuca sativa]
gi|255033484|gb|ACT99433.1| unknown [Lactuca sativa]
gi|255033492|gb|ACT99437.1| unknown [Lactuca serriola]
gi|255033494|gb|ACT99438.1| unknown [Lactuca sativa]
gi|255033500|gb|ACT99441.1| unknown [Lactuca sativa]
gi|255033502|gb|ACT99442.1| unknown [Lactuca sativa]
gi|255033504|gb|ACT99443.1| unknown [Lactuca sativa]
gi|255033508|gb|ACT99445.1| unknown [Lactuca sativa]
gi|255033512|gb|ACT99447.1| unknown [Lactuca sativa]
gi|255033514|gb|ACT99448.1| unknown [Lactuca sativa]
gi|255033516|gb|ACT99449.1| unknown [Lactuca sativa]
gi|255033518|gb|ACT99450.1| unknown [Lactuca sativa]
gi|255033520|gb|ACT99451.1| unknown [Lactuca sativa]
gi|255033522|gb|ACT99452.1| unknown [Lactuca sativa]
gi|255033526|gb|ACT99454.1| unknown [Lactuca sativa]
gi|255033532|gb|ACT99457.1| unknown [Lactuca serriola]
gi|255033536|gb|ACT99459.1| unknown [Lactuca sativa]
Length = 129
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 77/131 (58%), Gaps = 18/131 (13%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
RGA IV EG DRSGKT+Q+ +L+ YLN P + FPDR + G +I YL + +L
Sbjct: 15 ARGALIVLEGLDRSGKTSQSARLLSYLNNLGYPVESWRFPDRDTAVGKMISSYLTNQSQL 74
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D HLLFSANRWE+ + ++ GI+L + DRYS+SGVAFS
Sbjct: 75 DDHTIHLLFSANRWEKRSLMEAKLKSGISLIV-----------------DRYSYSGVAFS 117
Query: 126 AAKEGMDISWC 136
+AK G+DI WC
Sbjct: 118 SAK-GLDIEWC 127
>gi|255033474|gb|ACT99428.1| unknown [Lactuca sativa]
Length = 129
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 77/131 (58%), Gaps = 18/131 (13%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
RGA IV EG DRSGKT+Q+ +L+ YLN P + FPDR + G +I YL + +L
Sbjct: 15 ARGALIVLEGLDRSGKTSQSARLLSYLNNLGYPVESWRFPDRDTAVGKMISSYLTNQSQL 74
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D HLLFSANRWE+ + ++ GI+L + DRYS+SGVAFS
Sbjct: 75 DDHTIHLLFSANRWEKRSLMEAKLKSGISLIV-----------------DRYSYSGVAFS 117
Query: 126 AAKEGMDISWC 136
+AK G+DI WC
Sbjct: 118 SAK-GLDIEWC 127
>gi|45198887|ref|NP_985916.1| AFR369Wp [Ashbya gossypii ATCC 10895]
gi|44984916|gb|AAS53740.1| AFR369Wp [Ashbya gossypii ATCC 10895]
gi|374109147|gb|AEY98053.1| FAFR369Wp [Ashbya gossypii FDAG1]
Length = 213
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 96/185 (51%), Gaps = 23/185 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK-I 63
+ RG I+ EG DR GK+TQ L + L + Q + FP R G ++D YLR +
Sbjct: 1 MTRGRLILIEGLDRVGKSTQVGVLAERLQPH---VQLMRFPARDTPVGALLDRYLRDRDF 57
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
EL DQ AHLLF+ANRWE + + G Q DRY +SG A
Sbjct: 58 ELADQTAHLLFAANRWECAARIEAALAAG-----------------QHVILDRYVYSGAA 100
Query: 124 FSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
+SAAK MD+ WC ++GLPKPD L A +R G+G ERYEQ DFQ +V
Sbjct: 101 YSAAKAVPRMDLEWCAAADRGLPKPDLTLFLTQGAAAAAQRAGYGAERYEQPDFQERVRA 160
Query: 182 NYEKL 186
+E++
Sbjct: 161 QFERV 165
>gi|357610935|gb|EHJ67226.1| putative thymidylate kinase [Danaus plexippus]
Length = 192
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 82/144 (56%), Gaps = 27/144 (18%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GKTTQ + LV+ L ++ + + NFPDRT G +I+ YL +K E+
Sbjct: 5 RGALIVIEGVDRTGKTTQCRNLVEGLKNKDVAAMYSNFPDRTSEIGKVINHYLTRKTEMS 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D+ HLLFSANRWE+ + K +E G TL I DRY +SGVAFS
Sbjct: 65 DETIHLLFSANRWEKCGEIIKQLETGTTLII-----------------DRYCYSGVAFSG 107
Query: 127 AKEGMDISWCFQPEKGLPKPDAVL 150
AK G+ IS P+PD L
Sbjct: 108 AK-GIYIS---------PRPDIFL 121
>gi|323347864|gb|EGA82125.1| Cdc8p [Saccharomyces cerevisiae Lalvin QA23]
Length = 168
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 95/183 (51%), Gaps = 24/183 (13%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KI 63
+ RG I+ EG DR+GKTTQ L L N + + FP+R+ G +I+EYL
Sbjct: 1 MGRGKLILIEGLDRTGKTTQCNILYKKLQPN---CKLLKFPERSTRIGGLINEYLTDDSF 57
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+L DQA HLLFSANRWE + K + +G KN+ DRY +SGVA
Sbjct: 58 QLSDQAIHLLFSANRWEIVDKIKKDLLEG-------------KNI----VMDRYVYSGVA 100
Query: 124 FSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQRKVA 180
+SAAK GMD+ WC QP+ GL KPD L + + + GFG+ + RK
Sbjct: 101 YSAAKGTNGMDLDWCLQPDVGLLKPDLTLFLSTQDVDNNAEKSGFGERKIRNCQVSRKSE 160
Query: 181 ENY 183
N+
Sbjct: 161 ANF 163
>gi|255033432|gb|ACT99407.1| unknown [Lactuca sativa]
gi|255033438|gb|ACT99410.1| unknown [Lactuca sativa]
gi|255033448|gb|ACT99415.1| unknown [Lactuca sativa]
gi|255033450|gb|ACT99416.1| unknown [Lactuca sativa]
gi|255033452|gb|ACT99417.1| unknown [Lactuca sativa]
gi|255033456|gb|ACT99419.1| unknown [Lactuca sativa]
gi|255033458|gb|ACT99420.1| unknown [Lactuca sativa]
gi|255033460|gb|ACT99421.1| unknown [Lactuca sativa]
gi|255033462|gb|ACT99422.1| unknown [Lactuca sativa]
gi|255033464|gb|ACT99423.1| unknown [Lactuca sativa]
gi|255033480|gb|ACT99431.1| unknown [Lactuca sativa]
gi|255033486|gb|ACT99434.1| unknown [Lactuca sativa]
gi|255033488|gb|ACT99435.1| unknown [Lactuca sativa]
gi|255033496|gb|ACT99439.1| unknown [Lactuca sativa]
gi|255033534|gb|ACT99458.1| unknown [Lactuca sativa]
gi|255033538|gb|ACT99460.1| unknown [Lactuca sativa]
Length = 129
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 77/131 (58%), Gaps = 18/131 (13%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
RGA IV EG DRSGKT+Q+ +L+ YLN P + FPDR + G +I YL + +L
Sbjct: 15 ARGALIVLEGLDRSGKTSQSARLLSYLNNLGYPVESWRFPDRDTAVGKMISSYLTNQSQL 74
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D HLLFSANRWE+ + ++ GI+L + DRYS+SGVAFS
Sbjct: 75 DDHTIHLLFSANRWEKRSLMEAKLKSGISLIV-----------------DRYSYSGVAFS 117
Query: 126 AAKEGMDISWC 136
+AK G++I WC
Sbjct: 118 SAK-GLNIEWC 127
>gi|260909078|gb|ACX54176.1| chimeric thymidine kinase/thymidylate kinase [White spot syndrome
virus]
Length = 262
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 82/140 (58%), Gaps = 17/140 (12%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
+V EG DR GK+TQAK L+ N +++ FPDR+ TG +I++YL KKIEL D A
Sbjct: 140 LVVLEGGDRCGKSTQAKLLLTNKNSPLYGGEYMCFPDRSSHTGKLINDYLTKKIELDDHA 199
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
AHLLFSANRWE + +L++ GI + + DRY +SG+ FS A+
Sbjct: 200 AHLLFSANRWEVCSKIKQLLDDGIHVVM-----------------DRYYYSGIVFSLARG 242
Query: 130 GMDISWCFQPEKGLPKPDAV 149
+ WC ++GLP+PD V
Sbjct: 243 VDTVEWCSASDEGLPQPDLV 262
>gi|255033420|gb|ACT99401.1| unknown [Lactuca sativa]
gi|255033422|gb|ACT99402.1| unknown [Lactuca sativa]
gi|255033470|gb|ACT99426.1| unknown [Lactuca sativa]
gi|255033472|gb|ACT99427.1| unknown [Lactuca sativa]
gi|255033478|gb|ACT99430.1| unknown [Lactuca sativa]
gi|255033490|gb|ACT99436.1| unknown [Lactuca sativa]
gi|255033498|gb|ACT99440.1| unknown [Lactuca sativa]
gi|255033506|gb|ACT99444.1| unknown [Lactuca sativa]
gi|255033510|gb|ACT99446.1| unknown [Lactuca sativa]
gi|255033524|gb|ACT99453.1| unknown [Lactuca sativa]
gi|255033528|gb|ACT99455.1| unknown [Lactuca sativa]
gi|255033530|gb|ACT99456.1| unknown [Lactuca sativa]
Length = 129
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 76/131 (58%), Gaps = 18/131 (13%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
RGA IV EG DRSGKT+Q+ +L+ YLN + FPDR + G +I YL + +L
Sbjct: 15 ARGALIVLEGLDRSGKTSQSARLLSYLNNLGYRVESWRFPDRDTAVGKMISSYLTNQSQL 74
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D HLLFSANRWE+ + ++ GI+L + DRYS+SGVAFS
Sbjct: 75 DDHTIHLLFSANRWEKRSLMEAKLKSGISLIV-----------------DRYSYSGVAFS 117
Query: 126 AAKEGMDISWC 136
+AK G+DI WC
Sbjct: 118 SAK-GLDIEWC 127
>gi|429962618|gb|ELA42162.1| thymidylate kinase [Vittaforma corneae ATCC 50505]
Length = 186
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 92/175 (52%), Gaps = 23/175 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
IV EG DRSGKTT + L L P + FP+R TG ++D++L+K+I+ D
Sbjct: 5 LIVLEGLDRSGKTTVSSMLQQRLQ----PCTIIRFPNRATETGKLLDKFLKKQIKFSDHT 60
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
HLL+SANR+E E + L+ K+ C DRY SG +S AK
Sbjct: 61 IHLLYSANRYEEETRIRDLL----------------KSTHVIC--DRYWLSGAVYSTAK- 101
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
G+D WC +K LP+PD + E +R FG+E +++ +FQRKV E Y+
Sbjct: 102 GLDFEWCKSTDKLLPQPDFTFFLDVPVEETSKRTCFGNEVHDKIEFQRKVYEIYK 156
>gi|302685608|ref|XP_003032484.1| hypothetical protein SCHCODRAFT_233884 [Schizophyllum commune H4-8]
gi|300106178|gb|EFI97581.1| hypothetical protein SCHCODRAFT_233884 [Schizophyllum commune H4-8]
Length = 282
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 74/122 (60%), Gaps = 17/122 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIV EG DRSGK+TQA KL + L + + + + FPDRT + G +ID YLR IE+
Sbjct: 4 RGAFIVIEGLDRSGKSTQAAKLKEKLAADGVKVELMKFPDRTTAIGKMIDAYLRTNIEMD 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLL+SANRWE ++ L+ +G T+ DRY+FSG+AFSA
Sbjct: 64 DHVVHLLYSANRWELASRISTLLSEGTTI-----------------ICDRYAFSGIAFSA 106
Query: 127 AK 128
+K
Sbjct: 107 SK 108
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 134 SWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL------- 186
+WC P+ GLP PD L F + EA + R G+G+ERYE+ D QR+V E Y +L
Sbjct: 167 AWCRAPDIGLPAPDVTLFFDIAPEAARARGGYGEERYEREDVQRRVMEVYARLGAEMEAA 226
Query: 187 KDNIWIDIDADK 198
+ W+ +DA +
Sbjct: 227 RPGSWVRVDAAR 238
>gi|323332865|gb|EGA74268.1| Cdc8p [Saccharomyces cerevisiae AWRI796]
gi|323354251|gb|EGA86094.1| Cdc8p [Saccharomyces cerevisiae VL3]
Length = 138
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 85/152 (55%), Gaps = 23/152 (15%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KI 63
+ RG I+ EG DR+GKTTQ L L N + + FP+R+ G +I+EYL
Sbjct: 1 MGRGKLILIEGLDRTGKTTQCNILYKKLQPN---CKLLKFPERSTRIGGLINEYLTDDSF 57
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+L DQA HLLFSANRWE + K + +G KN+ DRY +SGVA
Sbjct: 58 QLSDQAIHLLFSANRWEIVDKIKKDLLEG-------------KNI----VMDRYVYSGVA 100
Query: 124 FSAAK--EGMDISWCFQPEKGLPKPDAVLLFK 153
+SAAK GMD+ WC QP+ GL KPD L FK
Sbjct: 101 YSAAKGTNGMDLDWCLQPDVGLLKPDLTLFFK 132
>gi|226488062|emb|CAX75696.1| Thymidylate kinase [Schistosoma japonicum]
Length = 224
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 23/207 (11%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNK-NNIPSQFVNFPDRTISTGHIIDEYL 59
M I RG F+VFEG ++ GK TQ++ L D L + + ++FPD++ G ++ EY
Sbjct: 1 MPGTIKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF 60
Query: 60 RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
K++L A+HLL ANRWER+ ++ ++ GI++ + DRYS+
Sbjct: 61 DGKLQLELHASHLLHIANRWERQDEISNALKAGISVVV-----------------DRYSY 103
Query: 120 SGVAFSAAK----EGMDISWCFQPEKGLPKPDAVL-LFKLNEEALQRRKGFGDERYEQTD 174
SG+A++AAK D WC E GL +PD + L N + R G ++E D
Sbjct: 104 SGIAYTAAKFHPLSDADWKWCRSVEYGLLQPDFIFCLAPENFAEISVRDSSGSNKFETMD 163
Query: 175 FQRKVAENYEKLKDNIWIDIDADKDID 201
FQ++V + +L + +++ + D D
Sbjct: 164 FQKRVLTYFGRLSREMESELNENNDDD 190
>gi|226488066|emb|CAX75698.1| Thymidylate kinase [Schistosoma japonicum]
gi|226488068|emb|CAX75699.1| Thymidylate kinase [Schistosoma japonicum]
Length = 224
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 23/207 (11%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNK-NNIPSQFVNFPDRTISTGHIIDEYL 59
M I RG F+VFEG ++ GK TQ++ L D L + + ++FPD++ G ++ EY
Sbjct: 1 MPGTIKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF 60
Query: 60 RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
K++L A+HLL ANRWER+ ++ ++ GI++ + DRYS+
Sbjct: 61 DGKLQLELHASHLLHIANRWERQDEISNALKAGISVVV-----------------DRYSY 103
Query: 120 SGVAFSAAK----EGMDISWCFQPEKGLPKPDAVL-LFKLNEEALQRRKGFGDERYEQTD 174
SG+A++AAK D WC E GL +PD + L N + R G ++E D
Sbjct: 104 SGIAYTAAKFHPLSDADWKWCRSVEYGLLQPDFIFCLAPENFAEISVRDSSGGNKFETMD 163
Query: 175 FQRKVAENYEKLKDNIWIDIDADKDID 201
FQ++V + +L + +++ + D D
Sbjct: 164 FQKRVLTYFGRLSREMESELNENNDDD 190
>gi|302685604|ref|XP_003032482.1| hypothetical protein SCHCODRAFT_84907 [Schizophyllum commune H4-8]
gi|300106176|gb|EFI97579.1| hypothetical protein SCHCODRAFT_84907 [Schizophyllum commune H4-8]
Length = 221
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 74/122 (60%), Gaps = 17/122 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGAFIV EG DRSGK+TQA KL + L + + + + FPDRT + G +ID YLR IE+
Sbjct: 4 RGAFIVIEGLDRSGKSTQAAKLKEKLAADGVKVELMKFPDRTTAIGKMIDAYLRTNIEMD 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLL+SANRWE ++ L+ +G T+ DRY+FSG+AFSA
Sbjct: 64 DHVVHLLYSANRWELASRISTLLTEGTTI-----------------ICDRYAFSGIAFSA 106
Query: 127 AK 128
+K
Sbjct: 107 SK 108
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 134 SWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
+WC P+ GLP PD L F + EA + R G+G+ERYE+ D QR+V E
Sbjct: 168 AWCRAPDIGLPAPDVTLFFDIAPEAARARGGYGEERYEREDVQRRVME 215
>gi|189502888|gb|ACE06825.1| unknown [Schistosoma japonicum]
gi|226488060|emb|CAX75695.1| Thymidylate kinase [Schistosoma japonicum]
gi|226488064|emb|CAX75697.1| Thymidylate kinase [Schistosoma japonicum]
Length = 224
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 23/192 (11%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNK-NNIPSQFVNFPDRTISTGHIIDEYL 59
M I RG F+VFEG ++ GK TQ++ L D L + + ++FPD++ G ++ EY
Sbjct: 1 MPGTIKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF 60
Query: 60 RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
K++L A+HLL ANRWER+ ++ ++ GI++ + DRYS+
Sbjct: 61 DGKLQLELHASHLLHIANRWERQDEISNALKAGISVVV-----------------DRYSY 103
Query: 120 SGVAFSAAK----EGMDISWCFQPEKGLPKPDAVL-LFKLNEEALQRRKGFGDERYEQTD 174
SG+A++AAK D WC E GL +PD + L N + R G ++E D
Sbjct: 104 SGIAYTAAKFHPLSDADWKWCRSVEYGLLQPDFIFCLAPENFAEISVRDSSGGNKFETMD 163
Query: 175 FQRKVAENYEKL 186
FQ++V + +L
Sbjct: 164 FQKRVLTYFGRL 175
>gi|256070556|ref|XP_002571609.1| thymidylate kinase [Schistosoma mansoni]
gi|238656754|emb|CAZ27839.1| thymidylate kinase [Schistosoma mansoni]
Length = 222
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 23/186 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNK-NNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
RG F+VFEG ++ GK TQ++ L + L + + ++FPD++ G ++ EY K++L
Sbjct: 7 RGLFVVFEGVEKCGKKTQSELLQEALTQITGKQALLIHFPDKSTPIGKLLTEYSDGKLQL 66
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
AAHLL+ ANRWER+ ++ ++ GI++ + DRYS+SG+A +
Sbjct: 67 EPHAAHLLYIANRWERQDEISSALKAGISVVV-----------------DRYSYSGIANT 109
Query: 126 AAK----EGMDISWCFQPEKGLPKPDAVL-LFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
AAK D WC E GL +PD + L N + R+ F D+++E DFQ+++
Sbjct: 110 AAKFHPLSEFDWKWCRSMEYGLLQPDFIFCLAPENFAEISVREAFSDKKFETMDFQKRIL 169
Query: 181 ENYEKL 186
Y +L
Sbjct: 170 IYYGRL 175
>gi|302506264|ref|XP_003015089.1| hypothetical protein ARB_06849 [Arthroderma benhamiae CBS 112371]
gi|291178660|gb|EFE34449.1| hypothetical protein ARB_06849 [Arthroderma benhamiae CBS 112371]
Length = 177
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 97/170 (57%), Gaps = 23/170 (13%)
Query: 54 IIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT 113
+I++YLR +I+L D A HLLFSANRWE + + IE GIT+ +
Sbjct: 1 MINQYLRGEIQLDDHAVHLLFSANRWEAAAQIRQDIESGITVIV---------------- 44
Query: 114 NDRYSFSGVAFSAAKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYE 171
DRYS+SG +SAAKE + + W ++PE GLP+PD ++ EA R G+G ERYE
Sbjct: 45 -DRYSYSGAVYSAAKENKELQLDWAWRPEVGLPRPDIWFFLNISIEAAAARGGYGTERYE 103
Query: 172 QTDFQRKVAENY---EKLKDNIWID-IDADKDIDTLGLIVKDIVIDTIKK 217
+ Q+KV + + +LK N + +DA + ID + +++ V+ T+ K
Sbjct: 104 TINLQKKVGKLFLSLTELKGNEDMRVVDAGRGIDEISRQIREEVLQTMAK 153
>gi|29841168|gb|AAP06181.1| similar to Chain A, Mutant Human Thymidylate Kinase F105y complexed
With Dtmp And Appnp [Schistosoma japonicum]
Length = 219
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 23/192 (11%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNK-NNIPSQFVNFPDRTISTGHIIDEYL 59
M I RG F+VFEG ++ GK TQ++ L D L + + ++FPD++ G ++ EY
Sbjct: 1 MPGTIKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF 60
Query: 60 RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
K++L A+HLL ANRWER+ ++ ++ GI++ + DRYS+
Sbjct: 61 DGKLQLELHASHLLHIANRWERQDEISNALKAGISVVV-----------------DRYSY 103
Query: 120 SGVAFSAAK----EGMDISWCFQPEKGLPKPDAVL-LFKLNEEALQRRKGFGDERYEQTD 174
SG+A++AAK D WC E GL +PD + L N + R G ++E D
Sbjct: 104 SGIAYTAAKFHPLSDADWKWCRSVEYGLLQPDFIFCLAPENFAEISVRDSSGGNKFETMD 163
Query: 175 FQRKVAENYEKL 186
FQ++V + +L
Sbjct: 164 FQKRVLTYFGRL 175
>gi|237845145|ref|XP_002371870.1| thymidylate kinase, putative [Toxoplasma gondii ME49]
gi|211969534|gb|EEB04730.1| thymidylate kinase, putative [Toxoplasma gondii ME49]
gi|221480782|gb|EEE19211.1| thymidylate kinase, putative [Toxoplasma gondii GT1]
gi|221501447|gb|EEE27223.1| thymidylate kinase, putative [Toxoplasma gondii VEG]
Length = 273
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 112/245 (45%), Gaps = 67/245 (27%)
Query: 1 MASQIP-RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL 59
MA+ P RG +VFEG DRSGK+TQA+ + L K ++ + FPDRT G ++D +L
Sbjct: 1 MAAFTPKRGCLVVFEGIDRSGKSTQARLAYERLTKEGHAAELIRFPDRTTPIGQVLDRFL 60
Query: 60 ---------RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQ 110
+ P Q HLLF+ANRWE + + + + +G T+ +
Sbjct: 61 ANASWSSDGQHPQVPPPQLTHLLFAANRWEAQARILRALGEGRTVLV------------- 107
Query: 111 GCTNDRYSFSGVAFS------------------AAKEG-------------------MDI 133
DRYSFSG+A++ A G +D
Sbjct: 108 ----DRYSFSGIAYTVGAAPSVAETEATRLRREAEASGDVEKTAEAVAASTAATGAPVDA 163
Query: 134 SWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKDNI--W 191
++C + E+GL PDAV + + Q+R G+GDE YE+ Q +V + Y + DN+ W
Sbjct: 164 TFCRESERGLLAPDAVFFLDVAPQETQKRGGYGDEVYEKLATQERVYQVYRQF-DNLPYW 222
Query: 192 IDIDA 196
I A
Sbjct: 223 RRIAA 227
>gi|401410945|ref|XP_003884920.1| Thymidylate kinase, related [Neospora caninum Liverpool]
gi|325119339|emb|CBZ54892.1| Thymidylate kinase, related [Neospora caninum Liverpool]
Length = 271
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 108/243 (44%), Gaps = 64/243 (26%)
Query: 1 MASQIP-RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL 59
MA P RG +VFEG DRSGK+TQA+ + L K P++ + FPDRT S G ++D++L
Sbjct: 1 MAGFTPKRGCLVVFEGIDRSGKSTQARLAYERLLKEGQPTELIRFPDRTTSIGQVLDKFL 60
Query: 60 RKKIE--------LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG 111
P Q HLLF+ANRWE + + + + +G T+ +
Sbjct: 61 ASATWSNEGPCQIPPPQLTHLLFAANRWEAQARILRALGEGKTVLV-------------- 106
Query: 112 CTNDRYSFSGVAFSAAKE-------------------------------------GMDIS 134
DRYSFSG+A++ +D +
Sbjct: 107 ---DRYSFSGIAYTVGAAPVLAETEAKSLQADANASGDPAKAAWSWAASTAATGASVDPA 163
Query: 135 WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKD-NIWID 193
+C + E+GL PDAV ++ Q R G+G+E YE+ Q +V + Y + + W
Sbjct: 164 FCRETERGLLAPDAVFFLDISPRETQSRGGYGEEVYEKLATQERVYQVYRQFESLPYWRR 223
Query: 194 IDA 196
I A
Sbjct: 224 IPA 226
>gi|395851584|ref|XP_003798333.1| PREDICTED: thymidylate kinase [Otolemur garnettii]
Length = 197
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 110/226 (48%), Gaps = 37/226 (16%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MA+Q RGA IV EG DR+GK+TQA++LV L ++ + FP + +
Sbjct: 1 MAAQ--RGALIVLEGVDRAGKSTQARRLVSALCSAGRRAELLRFPVVIV---------VW 49
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ + + A+ W P + + + QG+TL + DRY+FS
Sbjct: 50 QSLAGFEPASS---GVCGW---PLIKEKLSQGVTLIV-----------------DRYAFS 86
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
GVAF++AKE + WC QP+ GLPKPD VL +L R FG ERYE FQ +
Sbjct: 87 GVAFTSAKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAVRGEFGQERYEDRPFQERAL 146
Query: 181 ENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ + +L + W +DA + I+ + + + + D I + PL
Sbjct: 147 QCFHQLMADTTLNWKIVDASRSIEDIHMELLALCEDVICTAAQRPL 192
>gi|209732338|gb|ACI67038.1| Thymidylate kinase [Salmo salar]
gi|303659245|gb|ADM15955.1| Thymidylate kinase [Salmo salar]
Length = 120
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 17/121 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG D++GKTTQ KLV L + ++ + FP+RT G +I+ YL K L
Sbjct: 5 RGALIVLEGVDKAGKTTQCNKLVQALQDSGQKAEMMKFPERTTKIGQLINSYLENKSNLE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D HLLFSANRWE P + + +EQGI+L + DRY+FSGVAF++
Sbjct: 65 DHTVHLLFSANRWELMPLMKEKLEQGISLVV-----------------DRYAFSGVAFTS 107
Query: 127 A 127
A
Sbjct: 108 A 108
>gi|159467729|ref|XP_001692044.1| hypothetical protein CHLREDRAFT_94429 [Chlamydomonas reinhardtii]
gi|158278771|gb|EDP04534.1| predicted protein [Chlamydomonas reinhardtii]
Length = 167
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 73/122 (59%), Gaps = 17/122 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IVFEG DR GK+TQ L++ L K +P++ FPDRT G +I+EYL+KK L
Sbjct: 49 RGALIVFEGIDRCGKSTQCSLLLESLQKQGVPAELWRFPDRTTLIGGLINEYLQKKASLN 108
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A H+LF ANR E+ + +L+ G TL + DRYS+SGVA++A
Sbjct: 109 DAAVHMLFVANRHEKRDEMLRLLAGGTTLVL-----------------DRYSYSGVAYTA 151
Query: 127 AK 128
AK
Sbjct: 152 AK 153
>gi|387594290|gb|EIJ89314.1| thymidylate kinase [Nematocida parisii ERTm3]
gi|387595036|gb|EIJ92663.1| thymidylate kinase [Nematocida parisii ERTm1]
Length = 195
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 23/179 (12%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
F+V EG DRSGK++ KKL + L I ++ +N+P+R TG +I E L P +
Sbjct: 5 FVVVEGIDRSGKSSLIKKLENSLISQGISTKVLNYPNRNNLTGKLISEILSGHRAFPKEV 64
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
HLLFSANRWE + L +L + + L C DRY SG ++S A
Sbjct: 65 THLLFSANRWE-DKELLELSDYNVIL----------------C--DRYVLSGQSYSIAN- 104
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKD 188
G+ + F +KG+ PD L ++ E R+G+G+E YE+ +FQ+KV Y +KD
Sbjct: 105 GIPKEFAFASDKGIKLPDLTLFLDVSPEIAATREGYGEEVYEKKEFQQKV---YTTMKD 160
>gi|47212537|emb|CAF90553.1| unnamed protein product [Tetraodon nigroviridis]
Length = 166
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG D++GKTTQ KKLV L + P++ + FPDRT + G +I YL K EL
Sbjct: 5 RGALIVLEGVDKAGKTTQCKKLVQALQERGQPAEMMRFPDRTTAIGQLISAYLENKSELT 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEI-MHSSLENEKNLDQGCTNDRYSFSGVAFS 125
DQ HLLF+ANRWE P + K ++QG TL + ++ LE L N ++SG +
Sbjct: 65 DQTVHLLFAANRWEMVPLIKKKLQQGTTLVVDRYAFLE----LPSPVPNQASAWSGASIP 120
Query: 126 AAKEGMDISWCF 137
S CF
Sbjct: 121 TWACQGRTSSCF 132
>gi|269860112|ref|XP_002649779.1| thymidylate kinase [Enterocytozoon bieneusi H348]
gi|220066838|gb|EED44309.1| thymidylate kinase [Enterocytozoon bieneusi H348]
Length = 205
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 99/191 (51%), Gaps = 33/191 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+ FIV EG DRSGKTT L + ++K +F NFPDRT +TG ID +L++ E
Sbjct: 6 KNLFIVLEGIDRSGKTT----LCNLISKKINAVKF-NFPDRTTNTGKKIDNFLKQYCENV 60
Query: 67 ---------DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
++ HLLF NR E+ P + K +E N D C DRY
Sbjct: 61 ENIFDNKEINEKLHLLFRDNRLEKIPFILKTLE----------------NHDIIC--DRY 102
Query: 118 SFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQR 177
S SG+ +S +K G++ W EK LP PD +N E +R+ FG+E ++ +FQ+
Sbjct: 103 SMSGIVYSISK-GLNEKWVKDSEKDLPIPDITFFLDVNPEISFKRQDFGNEIHDTIEFQK 161
Query: 178 KVAENYEKLKD 188
KV ENY K KD
Sbjct: 162 KVYENYLKNKD 172
>gi|302657864|ref|XP_003020643.1| hypothetical protein TRV_05241 [Trichophyton verrucosum HKI 0517]
gi|291184499|gb|EFE40025.1| hypothetical protein TRV_05241 [Trichophyton verrucosum HKI 0517]
Length = 130
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 78/137 (56%), Gaps = 19/137 (13%)
Query: 54 IIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT 113
+I++YLR +I+L D A HLLFSANRWE + + IE GIT+ +
Sbjct: 1 MINQYLRGEIQLDDHAVHLLFSANRWEAAAQIRQDIESGITVIV---------------- 44
Query: 114 NDRYSFSGVAFSAAKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYE 171
DRYS+SG +SAAKE + + W ++PE GLP+PD ++ E R G+G ERYE
Sbjct: 45 -DRYSYSGAVYSAAKENKELQLDWAWRPEVGLPRPDIWFFLNISIEVAAARGGYGTERYE 103
Query: 172 QTDFQRKVAENYEKLKD 188
+ Q+KV + + L +
Sbjct: 104 TVNLQKKVGKLFLSLTE 120
>gi|452841745|gb|EME43682.1| hypothetical protein DOTSEDRAFT_72887 [Dothistroma septosporum
NZE10]
Length = 170
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 87/167 (52%), Gaps = 24/167 (14%)
Query: 54 IIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT 113
+I+ YL+ + D A HLLFSANRWE + +LI G + I
Sbjct: 1 MINSYLQGASQQEDHAIHLLFSANRWEAAEKIKQLITSGTDVVI---------------- 44
Query: 114 NDRYSFSGVAFSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYE 171
DRY +SG +SAAK MD++WC E GLP+PD L ++ E RR GFG ERYE
Sbjct: 45 -DRYYYSGCVYSAAKRNPAMDLAWCRNMEVGLPRPDLCLFLDVSAEDAARRGGFGTERYE 103
Query: 172 QTDFQRKVAENYEKLK-----DNIWIDIDADKDIDTLGLIVKDIVID 213
+ D Q +V + + +++ + + IDA +D + ++ IVI+
Sbjct: 104 KQDLQNRVRDLFAEMRIHPDENEDMVVIDAGGSMDAVHDAIQQIVIE 150
>gi|225683576|gb|EEH21860.1| thymidylate kinase [Paracoccidioides brasiliensis Pb03]
Length = 224
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 91/180 (50%), Gaps = 27/180 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ L + L + N+ DR I +L +
Sbjct: 12 RGALIVVEGLDRAGKSTQCALLQEALQRGG----HENYGDRKTDQCPI---WLETHNWMT 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
Q+ LFSANRWE + K I GI++ I DRYS+SG +SA
Sbjct: 65 IQSI-FLFSANRWEAAKEIQKDISNGISIII-----------------DRYSYSGAVYSA 106
Query: 127 AKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYE 184
AK+ G+ + W +QPE GLP+PD L ++ E RR G+G ERYE Q +V + ++
Sbjct: 107 AKDVPGLSLDWAWQPEIGLPQPDIWLFLNISPEEAARRGGYGLERYENDILQARVRQLFQ 166
>gi|405953891|gb|EKC21461.1| Thymidylate kinase [Crassostrea gigas]
Length = 135
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 77/142 (54%), Gaps = 25/142 (17%)
Query: 83 PTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKG 142
P + L+E G TL + DRY++SG G I WC QP+ G
Sbjct: 11 PKMKVLLEAGTTLIV-----------------DRYAYSG--------GFSIDWCKQPDCG 45
Query: 143 LPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKDNIWIDIDADKDIDT 202
LP+PD VL L +A +R FG+ERYEQTDFQ KV +N+ LK++ W +IDADK D
Sbjct: 46 LPRPDLVLYLNLRPDAAAKRGNFGNERYEQTDFQAKVMKNFHLLKESYWKEIDADKTEDD 105
Query: 203 LGLIVKDIVIDTIKKSQFSPLE 224
L + +IV++ I + P+E
Sbjct: 106 LAAELGEIVLNCIPTVRERPIE 127
>gi|402216300|gb|EJT96452.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Dacryopinax sp. DJM-731 SS1]
Length = 148
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 20/151 (13%)
Query: 71 HLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKEG 130
HLLFSANRWE ++ + +++GIT+ DRY+FSG FSAAK G
Sbjct: 2 HLLFSANRWELAASIERDLQEGITI-----------------VCDRYAFSGAVFSAAK-G 43
Query: 131 MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKDNI 190
+ + WC P+ GLP PDAVL ++ E R G+G+ERYE+ + Q +V + L +
Sbjct: 44 LPLEWCKAPDAGLPAPDAVLFLDISPEKAAERGGYGEERYEKREMQEQVRAQFAVLGKQV 103
Query: 191 --WIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
W +DA + ++ + + +V I+ Q
Sbjct: 104 KGWTRVDAGRSVEEVQQDISAVVKPLIELVQ 134
>gi|321474134|gb|EFX85100.1| hypothetical protein DAPPUDRAFT_46657 [Daphnia pulex]
Length = 149
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 19/138 (13%)
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D A HLLFSANRWE P + KL+++ + + DRYS SG+AFSA
Sbjct: 6 DHAIHLLFSANRWELLPDIKKLLQKSTNIIV-----------------DRYSNSGIAFSA 48
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
AK MD+ WC Q E GL KPD V+ ++ Q R + ERYE + Q+ V NY KL
Sbjct: 49 AKPNMDLRWCQQSESGLLKPDLVIFLGIDLVEAQTRGQY--ERYENLEMQKVVRSNYLKL 106
Query: 187 KDNIWIDIDADKDIDTLG 204
+D +DA + ++ +G
Sbjct: 107 QDETCRVVDASRSMEEVG 124
>gi|378756845|gb|EHY66869.1| thymidylate kinase [Nematocida sp. 1 ERTm2]
Length = 198
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 27/188 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+ F+V EG DRSGK++ A L L + + + +++P+R TG +I + L E
Sbjct: 3 KSLFVVIEGIDRSGKSSLAAALKTSLASHGVVADVISYPNRKNMTGMLISQVLAGDKEFI 62
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC------TNDRYSFS 120
+A HLLFSANRWE + E +NL Q C DRY S
Sbjct: 63 KEATHLLFSANRWEDK--------------------ERIENLMQPCEYTRVILCDRYILS 102
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVA 180
G+++S A G+ + +KG+ PD + ++ E R GFG E YE+ +FQ+KV
Sbjct: 103 GISYSIAN-GIPKEFAMASDKGMTLPDLTIFLDVSPETASARAGFGLEIYEKKEFQQKVY 161
Query: 181 ENYEKLKD 188
+ L D
Sbjct: 162 TEMKCLLD 169
>gi|126649231|ref|XP_001388288.1| thymidylate kinase [Cryptosporidium parvum Iowa II]
gi|126117126|gb|EAZ51226.1| thymidylate kinase [Cryptosporidium parvum Iowa II]
Length = 166
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 18/150 (12%)
Query: 54 IIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT 113
++D YL K I++ Q +HLLF+ANRWE + + +E GI D C
Sbjct: 1 MLDGYLGKSIKMAPQVSHLLFTANRWELNNYIKENLENGI---------------DVVC- 44
Query: 114 NDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQT 173
DRYSFSG+A+S+ +D WC E+GL PD V+ ++N + R GFG E YE
Sbjct: 45 -DRYSFSGIAYSSGAINLDFEWCKSREQGLISPDIVVFLEVNLDLSSTRSGFGVEIYENI 103
Query: 174 DFQRKVAENYEKLKD-NIWIDIDADKDIDT 202
Q V + Y+K + + W +I+A + D
Sbjct: 104 SDQISVRKVYQKFSNYSFWRNINASQSPDV 133
>gi|428164973|gb|EKX33981.1| hypothetical protein GUITHDRAFT_43854, partial [Guillardia theta
CCMP2712]
Length = 155
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 81/161 (50%), Gaps = 24/161 (14%)
Query: 42 VNFPDRTISTGHIIDEYLR-KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHS 100
+ FP R G ID +LR L HLLFSANRWE + + + +G
Sbjct: 1 LGFPRRETILGKFIDHHLRTASARLDIHLVHLLFSANRWEAAAEILRSLREG-------- 52
Query: 101 SLENEKNLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQ 160
+ DRYSFSG+A+S A +G+ WCF E GLP PD V L ++ A
Sbjct: 53 ---------RHVVVDRYSFSGLAYSIA-QGLGRDWCFSWEVGLPAPDVVFLLDIDPSAAA 102
Query: 161 RRKGFGDERYEQTDFQRKV----AENYEKLKD-NIWIDIDA 196
+R G+G ERYE+ + Q++V E EK K + WI +DA
Sbjct: 103 QRPGYGKERYEKVELQQRVRNAFLEEAEKGKGASRWIMLDA 143
>gi|221105979|ref|XP_002169331.1| PREDICTED: thymidylate kinase-like [Hydra magnipapillata]
Length = 78
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RGAF+V EGCD+SGK+TQ + LVDYLN ++ FP+R+ + G II+ Y+ KK E
Sbjct: 1 MGRGAFVVLEGCDKSGKSTQCRLLVDYLNSLGKKTELWRFPERSTAIGQIINGYITKKNE 60
Query: 65 LPDQAAHLLFSANRWE 80
L D+A HL+FSANRWE
Sbjct: 61 LHDKAVHLMFSANRWE 76
>gi|67590947|ref|XP_665517.1| thymidylate kinase [Cryptosporidium hominis TU502]
gi|54656244|gb|EAL35286.1| thymidylate kinase [Cryptosporidium hominis]
Length = 165
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 18/150 (12%)
Query: 54 IIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT 113
++D YL K I++ Q +HLLF+ANRWE + + +E GI D C
Sbjct: 1 MLDGYLGKSIKMAPQVSHLLFTANRWELNNYIKENLENGI---------------DVVC- 44
Query: 114 NDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQT 173
DRYSFSG+A+S+ +D WC E+GL PD V+ ++N R GFG E YE
Sbjct: 45 -DRYSFSGIAYSSGAINLDFEWCKSREQGLISPDIVVFLEVNLGLSSTRSGFGVEIYENI 103
Query: 174 DFQRKVAENYEKLKD-NIWIDIDADKDIDT 202
Q V + Y+K + + W +I+A + D
Sbjct: 104 SDQISVRKVYQKFSNYSFWRNINASQSPDV 133
>gi|156088733|ref|XP_001611773.1| thymidylate kinase [Babesia bovis T2Bo]
gi|154799027|gb|EDO08205.1| thymidylate kinase, putative [Babesia bovis]
Length = 237
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 82/188 (43%), Gaps = 23/188 (12%)
Query: 13 FEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQ-AAH 71
FEG DRSGK+TQ K L L I + + FP G ++ +L + + H
Sbjct: 18 FEGIDRSGKSTQVKLLSQKLTDKGIDHKLLKFPCYETECGKMLATHLASHGAVRSRRCIH 77
Query: 72 LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKEGM 131
LLFSANRWE + + G + + DRY+FSGVA+S E +
Sbjct: 78 LLFSANRWEMMKEIVATLVSGTHIIV-----------------DRYAFSGVAYSVGAENL 120
Query: 132 DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ---TDFQRKVAENYEKLKD 188
WC + GL PD V+ R FGDERYEQ + R+V E + L
Sbjct: 121 SYEWCITADDGLLSPDLVVYLDNPAAVSAARSNFGDERYEQEGKLEAVRRVYEEFSSLP- 179
Query: 189 NIWIDIDA 196
W DA
Sbjct: 180 -YWHKYDA 186
>gi|82915445|ref|XP_729074.1| thymidylate kinase [Plasmodium yoelii yoelii 17XNL]
gi|23485911|gb|EAA20639.1| Thymidylate kinase [Plasmodium yoelii yoelii]
Length = 146
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 17/125 (13%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+ + RG FIVFEG DRSGK+TQ+K V+YL NNI Q + FP+R + G II YL+ +
Sbjct: 10 TNLKRGNFIVFEGVDRSGKSTQSKLFVEYLKNNNIQVQHLCFPNRETTIGKIITNYLKME 69
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
++ HLLFSANRWE + L+ G+ + C DR +SGV
Sbjct: 70 STFSNETIHLLFSANRWEMMDQIKNLLINGVWVI---------------C--DRXXYSGV 112
Query: 123 AFSAA 127
+S+
Sbjct: 113 XYSSG 117
>gi|408405230|ref|YP_006863213.1| thymidylate kinase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408365826|gb|AFU59556.1| putative thymidylate kinase [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 197
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G IV EG D++GKTTQ++ L + L ++FPD T G I +L + + P
Sbjct: 4 KGKIIVLEGTDKAGKTTQSRMLAEALKVLGKVCVIIDFPDYTTPIGTEIRAFLDGRRDYP 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ HLLFSANRWE++ + ++E G T+ +M +RY S + + A
Sbjct: 64 AEVKHLLFSANRWEKKKEIESMVENG-TIVVM----------------NRYWQSNLIYGA 106
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
A GMD SW +KGLP+ D V++ +N +R D +NY K
Sbjct: 107 A-NGMDTSWLLNLDKGLPEEDLVIIILVNPSISTKRAESQDAFESNPQLAAWAYKNYLKF 165
Query: 187 KDNI-WIDIDADKDIDTLGLIVKDIV 211
W ID K D + V IV
Sbjct: 166 AKQFGWKVIDGSKSKDQVHQEVMKIV 191
>gi|226471244|emb|CAX70703.1| Thymidylate kinase [Schistosoma japonicum]
Length = 132
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 22/148 (14%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNK-NNIPSQFVNFPDRTISTGHIIDEYL 59
M I RG F+VFEG ++ GK TQ++ L D L + + ++FPD++ G ++ EY
Sbjct: 1 MPGTIKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF 60
Query: 60 RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
K++L A+HLL ANRWER+ ++ ++ GI++ + DRYS+
Sbjct: 61 DGKLQLELHASHLLHIANRWERQDEISNALKAGISVVV-----------------DRYSY 103
Query: 120 SGVAFSAAK----EGMDISWCFQPEKGL 143
SG+A++AAK D WC E GL
Sbjct: 104 SGIAYTAAKFHPLSDADWKWCRSVEYGL 131
>gi|166796829|gb|AAI59429.1| Dtymk protein [Rattus norvegicus]
Length = 124
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MAS+ RGA IV EG DR+GKTTQ +LV L + ++ + FP+R+ G ++ YL
Sbjct: 1 MASR--RGALIVLEGVDRAGKTTQCLRLVTALCASGHRAELLRFPERSTEIGKLLSSYLE 58
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITL 95
KK EL D + HLLFSANRWE+ P + + QG+TL
Sbjct: 59 KKTELEDHSVHLLFSANRWEQVPLIKAKLNQGVTL 93
>gi|413926758|gb|AFW66690.1| hypothetical protein ZEAMMB73_755612 [Zea mays]
Length = 379
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 64/106 (60%), Gaps = 5/106 (4%)
Query: 86 TKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPK 145
T L+ + ++ S L + L DRYS+SGVAFSAAK G+DI WC PE GL
Sbjct: 100 TDLVRTSCSRALVESKLLSGTTL----IVDRYSYSGVAFSAAK-GLDIEWCKAPENGLIA 154
Query: 146 PDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKDNIW 191
PD V+ + E R G+G ERYE+ +FQ+KVAE+Y L+D+ W
Sbjct: 155 PDLVIYLDVQPEKAAERGGYGGERYEKIEFQKKVAEHYHSLRDSTW 200
>gi|345307032|ref|XP_001513078.2| PREDICTED: thymidylate kinase-like [Ornithorhynchus anatinus]
Length = 169
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 86/180 (47%), Gaps = 44/180 (24%)
Query: 47 RTISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEK 106
R+ G ++ YL +KI L D HLLFSANRWE+ P + + + QGITL +
Sbjct: 25 RSTEIGKLLSSYLERKINLEDHTVHLLFSANRWEQVPLMKEKLNQGITLIV--------- 75
Query: 107 NLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFG 166
DRY+FSGVAF++AKE L +A R FG
Sbjct: 76 --------DRYAFSGVAFTSAKE-------------LSTVEAAT-----------RGSFG 103
Query: 167 DERYEQTDFQRKVAENYEKL-KDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
ERYE FQ K +++ KL KD W IDA K+I+ L + + + IK++ P+
Sbjct: 104 TERYENNAFQEKALQSFHKLMKDKTLNWKVIDASKNIEDLHKEIHHLSKEAIKEAGKKPI 163
>gi|115433106|ref|XP_001216690.1| thymidylate kinase [Aspergillus terreus NIH2624]
gi|114189542|gb|EAU31242.1| thymidylate kinase [Aspergillus terreus NIH2624]
Length = 175
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 19/127 (14%)
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
++ D + HLLFSANRWE ++ + ++ G T+ + DRYS+SG
Sbjct: 18 QMDDHSIHLLFSANRWEVAQSIERDVDNGTTVIV-----------------DRYSYSGAV 60
Query: 124 FSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAE 181
+SAAK + + W +QPE GLP+PD L ++ E +R GFG ERYE Q +V E
Sbjct: 61 YSAAKGNPSLSLGWAWQPEVGLPRPDLCLFLQITPEEAAKRGGFGAERYENETMQTRVRE 120
Query: 182 NYEKLKD 188
++ + D
Sbjct: 121 LFKTIFD 127
>gi|414885205|tpg|DAA61219.1| TPA: hypothetical protein ZEAMMB73_575031 [Zea mays]
Length = 423
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 93 ITLEIMHSSLENEKNLDQGCT--NDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVL 150
+ E+ ++ E L G T DRYS+SGVAFSAAK +DI WC PE GL P+ V+
Sbjct: 225 VVFELKNAKALMESKLLSGTTLIVDRYSYSGVAFSAAKV-LDIEWCKAPENGLIAPNLVI 283
Query: 151 LFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKDNIW 191
+ + + R G+G ERYE+ +FQ+KVAE+Y L+D+ W
Sbjct: 284 YLDVQPKKVAERGGYGGERYEKIEFQKKVAEHYHSLRDSTW 324
>gi|355685021|gb|AER97593.1| deoxythymidylate kinase [Mustela putorius furo]
Length = 129
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 105 EKNLDQGCT--NDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR 162
+K L QG T DRY+FSGVAF++AKE + WC QP+ GLPKPD V+ +L R
Sbjct: 2 KKKLGQGITLVVDRYAFSGVAFTSAKENFSLDWCKQPDVGLPKPDLVVFLQLGLAEAAAR 61
Query: 163 KGFGDERYEQTDFQRKVAENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
FG ERYE +FQ + + +L K W +DA K I+ + + + +DTI+
Sbjct: 62 GEFGRERYENGNFQERALRCFHQLMADKTLNWKMVDASKSIEDVHKEIHALSVDTIQAVT 121
Query: 220 FSPL 223
PL
Sbjct: 122 ERPL 125
>gi|349803555|gb|AEQ17250.1| putative deoxythymidylate kinase (thymidylate kinase) [Pipa
carvalhoi]
Length = 80
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 53/79 (67%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQA++LV+ L + ++ + FP+RT G +I YL KK L
Sbjct: 1 RGALIVLEGADRAGKSTQARRLVEALKERGYRAEGLRFPERTTEIGRLIGSYLEKKSNLE 60
Query: 67 DQAAHLLFSANRWEREPTL 85
D HLLFSANRWE+ P +
Sbjct: 61 DHTIHLLFSANRWEQVPLI 79
>gi|345790843|ref|XP_851996.2| PREDICTED: uncharacterized protein LOC609615 [Canis lupus
familiaris]
Length = 434
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 105 EKNLDQGCT--NDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR 162
+K L QG T DRY+FSGVAF++AKE + WC QP+ GLPKPD V+ +L R
Sbjct: 306 KKKLSQGITLIVDRYAFSGVAFTSAKEDFSLDWCKQPDVGLPKPDLVVFLQLRLAEAATR 365
Query: 163 KGFGDERYEQTDFQRKVAENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
FG ERYE FQ + + +L + W +DA K I+ + + + +DT++ +
Sbjct: 366 GEFGRERYEDGKFQERALRRFHQLMADQTVNWKMVDASKSIEAVHKEIHALSVDTMQAAA 425
Query: 220 FSPL 223
PL
Sbjct: 426 QRPL 429
>gi|12963517|ref|NP_075625.1| thymidylate kinase isoform 2 [Mus musculus]
gi|1836040|gb|AAB46837.1| thymidylate kinase [Mus sp.]
gi|12848397|dbj|BAB27937.1| unnamed protein product [Mus musculus]
gi|12859415|dbj|BAB31646.1| unnamed protein product [Mus musculus]
gi|12859652|dbj|BAB31722.1| unnamed protein product [Mus musculus]
gi|47124402|gb|AAH69902.1| Deoxythymidylate kinase [Mus musculus]
gi|74141414|dbj|BAE35986.1| unnamed protein product [Mus musculus]
gi|148707984|gb|EDL39931.1| deoxythymidylate kinase, isoform CRA_b [Mus musculus]
Length = 80
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MAS+ RGA IV EG DR+GKTTQ KLV L + ++ + FP+R+ G +++ YL
Sbjct: 1 MASR--RGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLE 58
Query: 61 KKIELPDQAAHLLFSANRWER 81
KK EL D + HLLFSANRWE+
Sbjct: 59 KKTELEDHSVHLLFSANRWEQ 79
>gi|449691080|ref|XP_004212556.1| PREDICTED: thymidylate kinase-like, partial [Hydra magnipapillata]
Length = 119
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Query: 115 DRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTD 174
DRY++SGVAF++AK G D+ WC + GLP+PDAV ++ E R +G ERYE +D
Sbjct: 6 DRYAYSGVAFTSAK-GYDMLWCKNCDIGLPRPDAVYYMNIDIEDASVRGDYGCERYEVSD 64
Query: 175 FQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
FQ+KV E ++ LK+ W IDA + ID + + + V+ TI + + + L
Sbjct: 65 FQKKVQECFQNLKEPSWNVIDARESIDCIHKTLCESVLKTIGECENTLL 113
>gi|348577655|ref|XP_003474599.1| PREDICTED: thymidylate kinase-like isoform 2 [Cavia porcellus]
Length = 80
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 50/74 (67%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV L ++ + FPDR+ G ++ YL KK EL
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVSALCAAGHRAELLRFPDRSTEIGKLLSSYLEKKSELE 64
Query: 67 DQAAHLLFSANRWE 80
D + HLLFSANRWE
Sbjct: 65 DHSVHLLFSANRWE 78
>gi|387866116|ref|YP_003358216.2| thymidylate kinase [Anguillid herpesvirus 1]
gi|387866024|gb|ADA57840.2| thymidylate kinase [Anguillid herpesvirus 1]
Length = 221
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 32/217 (14%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+ I G I EGCDR+GK+T +L + ++ V+FP G LR
Sbjct: 18 AAIKIGRLIAVEGCDRTGKSTLCARLAETWPESITA---VHFPK---MEGTFTGSVLRTA 71
Query: 63 IELP-----DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
+ P + HLLFSANRWE ++ + + L K + DRY
Sbjct: 72 FKTPFVRSNPRIMHLLFSANRWE-------------LMDFIGAELAKGKIV----VCDRY 114
Query: 118 SFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFG-DERYEQTDFQ 176
SG+A+S K G+D WC P++ L +PDA + AL +RK +G D +E +FQ
Sbjct: 115 FGSGLAYSMVK-GLDQEWCEGPDRRLIQPDATIYLDAPLSALMKRKDWGADTVFETEEFQ 173
Query: 177 RKVAENYEKL-KDNIWIDIDAD-KDIDTLGLIVKDIV 211
K+ Y+KL ++ W IDAD D D + +V+ +
Sbjct: 174 SKLIPIYDKLAREKRWTRIDADLLDADAVYTLVEGYI 210
>gi|149037468|gb|EDL91899.1| deoxythymidylate kinase (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 80
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
MAS+ RGA IV EG DR+GKTTQ +LV L + ++ + FP+R+ G ++ YL
Sbjct: 1 MASR--RGALIVLEGVDRAGKTTQCLRLVTALCASGHRAELLRFPERSTEIGKLLSSYLE 58
Query: 61 KKIELPDQAAHLLFSANRWE 80
KK EL D + HLLFSANRWE
Sbjct: 59 KKTELEDHSVHLLFSANRWE 78
>gi|297607687|ref|NP_001060418.2| Os07g0639900 [Oryza sativa Japonica Group]
gi|255678005|dbj|BAF22332.2| Os07g0639900 [Oryza sativa Japonica Group]
Length = 131
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
+SQ RGA IV EG DRSGK++Q +L+ +L ++ FPDR S G +I YL
Sbjct: 45 SSQGGRGALIVLEGLDRSGKSSQCARLLSFLQGKGCQAEGWRFPDRGTSVGQMISAYLAN 104
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKL 88
+ EL D+ HLLFSANRWE+ L L
Sbjct: 105 ESELDDRTIHLLFSANRWEKRFVLFNL 131
>gi|161529215|ref|YP_001583041.1| thymidylate kinase [Nitrosopumilus maritimus SCM1]
gi|160340516|gb|ABX13603.1| thymidylate kinase [Nitrosopumilus maritimus SCM1]
Length = 193
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 91/191 (47%), Gaps = 20/191 (10%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
IV EG D++GK TQ+ L L K I ++ +FPD G I +YL K + P Q
Sbjct: 2 IIVIEGGDQAGKLTQSTMLEKALKKRKIKTKLFHFPDYKTHIGKEIRQYLDGKRKFPPQV 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
H L SANRWE+ +EQ T + +S L +RY S + + A
Sbjct: 62 IHCLLSANRWEK-------LEQIKTAQEKNSVL----------IMNRYYHSNLVYGLA-N 103
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQRKVAENYEKL-K 187
GM W + GLPK D V+L + + E+ R+K D+ + +F RK++ Y+ K
Sbjct: 104 GMKEKWLESLDAGLPKADLVILLDVTQKESFNRQKTNRDKFEKNEEFLRKISRIYKTTAK 163
Query: 188 DNIWIDIDADK 198
W IDA K
Sbjct: 164 KKRWKIIDATK 174
>gi|407463289|ref|YP_006774606.1| thymidylate kinase [Candidatus Nitrosopumilus koreensis AR1]
gi|407046911|gb|AFS81664.1| thymidylate kinase [Candidatus Nitrosopumilus koreensis AR1]
Length = 193
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 91/191 (47%), Gaps = 20/191 (10%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
IV EG D++GK TQ+ L L K I ++ +FPD T G I +YL K + P Q
Sbjct: 2 IIVIEGGDQAGKLTQSTMLEKALKKRKIKTKLFHFPDYTTPVGKEIRKYLDGKRKFPPQV 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
H L +ANRWE+ + E+ L IM +RY S + + A
Sbjct: 62 IHCLLAANRWEKLDQILDAQEKNSVL-IM----------------NRYYHSNLIYGLA-N 103
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQRKVAENYEKL-K 187
GM W + GLPK D V+L + + E+ R+K D+ + +F RK+++ Y+ K
Sbjct: 104 GMKQKWLENLDAGLPKADLVILLDVTQKESFNRQKTNRDKFEKNKEFLRKISKIYKNTAK 163
Query: 188 DNIWIDIDADK 198
W IDA K
Sbjct: 164 KKHWKIIDASK 174
>gi|351713265|gb|EHB16184.1| Thymidylate kinase [Heterocephalus glaber]
Length = 216
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 5/104 (4%)
Query: 105 EKNLDQGCT--NDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR 162
++ L QG T DRY+FSGVAF++AKE + WC QP+ GLPKPD +L +L R
Sbjct: 88 KEKLRQGVTLVVDRYAFSGVAFTSAKENFSLDWCKQPDVGLPKPDLILFLQLQLADASTR 147
Query: 163 KGFGDERYEQTDFQRKVAENYEKL-KDNI--WIDIDADKDIDTL 203
FG ERYE+ FQ +V ++++L +D+ W +DA K I+ +
Sbjct: 148 GEFGRERYEEKTFQERVLGSFQQLMRDSTLNWKVVDASKSIEAV 191
>gi|386875405|ref|ZP_10117579.1| dTMP kinase [Candidatus Nitrosopumilus salaria BD31]
gi|386806804|gb|EIJ66249.1| dTMP kinase [Candidatus Nitrosopumilus salaria BD31]
Length = 193
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
IV EG D++GK TQ+ L L K I ++ +FPD G I +YL + P Q
Sbjct: 2 IIVIEGGDQAGKLTQSTMLEKSLKKRKIKTKLFHFPDYKTPIGKEIRQYLDGNRKFPPQV 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
H L SANRWE+ + ++ L IM +RY S + + A
Sbjct: 62 IHCLLSANRWEKLDEILAAQDKNSVL-IM----------------NRYYHSNLIYGIA-N 103
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQRKVAENYEKL-K 187
GM SW + GLPK D V+L + + E+ QR+K D+ + +F RK+++ Y K
Sbjct: 104 GMKQSWLENLDAGLPKADLVILLDVTQKESFQRQKTNRDKFEKNEEFLRKISKIYRATAK 163
Query: 188 DNIWIDIDADK 198
W IDA K
Sbjct: 164 KKHWKIIDASK 174
>gi|119591692|gb|EAW71286.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_d [Homo
sapiens]
Length = 83
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 53/75 (70%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EG DR+GK+TQ++KLV+ L ++ + FP+R+ G ++ YL+KK ++
Sbjct: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64
Query: 67 DQAAHLLFSANRWER 81
D + HLLFSANRWE+
Sbjct: 65 DHSVHLLFSANRWEQ 79
>gi|340345680|ref|ZP_08668812.1| Thymidylate kinase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520821|gb|EGP94544.1| Thymidylate kinase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 193
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
IV EG D++GK TQ L L + I + +FPD G I +YL K + P Q
Sbjct: 2 IIVIEGGDQAGKKTQTALLAKALKQRKIKTTTFSFPDYKTPVGKEIAKYLNCKRKFPPQV 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
H L +ANRWE+ EI+ + +N +RY S + + A
Sbjct: 62 IHCLLAANRWEKLN------------EILAAQSKNS-----IVIMNRYYHSNLIYGLA-N 103
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQT-DFQRKVAENYEKL-K 187
GM W + GLPK D V+L + + RRK +++E+ +F RK+++ Y + K
Sbjct: 104 GMKSKWLKNLDDGLPKADLVILLDVTQRESFRRKKTNRDKFEKNEEFLRKISKIYRTIAK 163
Query: 188 DNIWIDIDADKD 199
W IDA K
Sbjct: 164 KEYWKIIDASKS 175
>gi|393794874|ref|ZP_10378238.1| thymidylate kinase [Candidatus Nitrosoarchaeum limnia BG20]
Length = 193
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
IV EG D++GK TQ L L + I + +FPD G I +YL K + P Q
Sbjct: 2 IIVIEGGDQAGKKTQTALLAKALKQRKIKTTTFSFPDYKTPIGKEISKYLNGKRKFPPQV 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
H L +ANRWE+ + + N ++ + +RY S + + A
Sbjct: 62 IHCLLAANRWEK-----------------LNDILNAQSKNSVLIMNRYYQSNLIYGLA-N 103
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQT-DFQRKVAENYEKL-K 187
GM+ W + GLPK D V+L +++ RRK +++E+ +F R +++ Y K+ K
Sbjct: 104 GMNRKWLENLDSGLPKADLVILLDVSQTESFRRKKTNRDKFEKNEEFLRNISKIYRKIAK 163
Query: 188 DNIWIDIDADK 198
W IDA K
Sbjct: 164 KENWKIIDASK 174
>gi|361130088|gb|EHL01942.1| putative Thymidylate kinase [Glarea lozoyensis 74030]
Length = 242
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 80/184 (43%), Gaps = 56/184 (30%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
+ + RGAFIV EG DRSGKTTQ K L D L + + FP
Sbjct: 54 SGPVSRGAFIVLEGLDRSGKTTQVKLLCDKLYSEGHNVRTLRFPA--------------- 98
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
W +E I +G T+ DRY +SG
Sbjct: 99 -----------------WIKEQ-----ISRGYTI-----------------VCDRYYYSG 119
Query: 122 VAFSAAKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
+ +SAAK+ + + W P+ GLP+PD VL L E +++R G+G+E+YE+ + Q V
Sbjct: 120 MVYSAAKKNPTLSLQWARSPDVGLPRPDRVLFLDLTAEEVEKRLGYGEEKYEKRELQETV 179
Query: 180 AENY 183
E +
Sbjct: 180 REVF 183
>gi|329766083|ref|ZP_08257642.1| thymidylate kinase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137354|gb|EGG41631.1| thymidylate kinase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 193
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 20/191 (10%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
IV EG D++GK TQ L L + I + +FPD G I +YL K + P Q
Sbjct: 2 IIVIEGGDQAGKKTQTALLAKALKQRKIKTTTFSFPDYKTPIGKEISKYLNGKRKFPPQV 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
H L +ANRWE+ L +I N ++ + +RY S + + A
Sbjct: 62 IHCLLAANRWEK---LNDII--------------NAQSKNSVIIMNRYYQSNLIYGLA-N 103
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQT-DFQRKVAENYEKL-K 187
GM+ W + GLPK D V+L +++ RRK +++E+ +F R +++ Y K+ K
Sbjct: 104 GMNRKWLENLDSGLPKADLVILLDVSQTESFRRKKTNRDKFEKNEEFLRNISKIYRKIAK 163
Query: 188 DNIWIDIDADK 198
W IDA +
Sbjct: 164 QENWKIIDASR 174
>gi|70951454|ref|XP_744966.1| thymidylate kinase [Plasmodium chabaudi chabaudi]
gi|56525131|emb|CAH77574.1| thymidylate kinase, putative [Plasmodium chabaudi chabaudi]
Length = 129
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 115 DRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTD 174
DRY++SGVA+S+ + WC P+KGL KPDAV L Q R +G E YE+ +
Sbjct: 16 DRYAYSGVAYSSGALKLPKEWCMNPDKGLIKPDAVCYLNLPPNHAQNRSEYGKEIYEKFE 75
Query: 175 FQRKVAENYEKLK-DNIWIDIDADKDIDTL-GLIVKDIVID-TIKKSQFSPLES 225
Q+++ E YE ++ WI+IDA K I + IV++I + K +QF L S
Sbjct: 76 VQKRIYEAYEHFSNEDYWINIDATKSIQEIHNTIVEEISKKCSSKNTQFEYLWS 129
>gi|340503294|gb|EGR29897.1| thymidylate kinase, putative [Ichthyophthirius multifiliis]
Length = 131
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Query: 114 NDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQT 173
+DRY++SGV +S AK G+++ WC +KGLP+PD + +EE +R GFG+E YE
Sbjct: 15 SDRYAYSGVCYSTAK-GLNVEWCKNCDKGLPQPDIIFYLYASEEVTSKRGGFGEEIYENN 73
Query: 174 DFQRKVAENYEKL---KDNIWIDIDADKDIDTLGLIVKD 209
FQ+KV +E L + N+ + ID +K +D + +KD
Sbjct: 74 SFQKKVRFEFEGLLRNEKNV-VRIDTEKSLDEVHQEIKD 111
>gi|407465667|ref|YP_006776549.1| thymidylate kinase [Candidatus Nitrosopumilus sp. AR2]
gi|407048855|gb|AFS83607.1| thymidylate kinase [Candidatus Nitrosopumilus sp. AR2]
Length = 200
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
IV EG D++GK TQ+ L L K I ++ +FPD G I +YL K + P Q
Sbjct: 2 IIVIEGGDQAGKLTQSTLLEKALKKQKIKTKLFHFPDYDTPIGKEIRKYLDGKRKFPPQV 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
H L +ANRWE+ + E+ L IM +RY S + + A
Sbjct: 62 IHCLLAANRWEKFDEILAAEEKNSVL-IM----------------NRYYHSNLVYGLA-N 103
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEAL-------QRRKGFGDERYEQT-DFQRKVAE 181
G+ W + GLPK D V+L + ++ QR K +++E+ F RK+++
Sbjct: 104 GLKQKWLETLDDGLPKADLVILLDVTQKESFSRSPQNQRGKIMKRDKFEKNKQFSRKISQ 163
Query: 182 NYEKL-KDNIWIDIDADK 198
Y K W IDA K
Sbjct: 164 IYRTTAKKKHWKIIDASK 181
>gi|167042320|gb|ABZ07049.1| putative Thymidylate kinase [uncultured marine crenarchaeote
HF4000_ANIW97J3]
Length = 292
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 11 IVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQAA 70
I EG D++GK TQ + LV L + I + +FPD + G I +L K P +
Sbjct: 103 IAIEGLDQAGKKTQTEMLVKALRRIKIKTAVFSFPDYSTIIGKEIKNHLSGKRNFPPEII 162
Query: 71 HLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKEG 130
H L++ANR E+ EI +S +N +RY S + + A G
Sbjct: 163 HYLYAANRLEKLE------------EIQKASSKNS-----VLVMNRYYHSNLVYGIA-NG 204
Query: 131 MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQT-DFQRKVAENYEKL-KD 188
+ W + E+GLPK D V++ +++ RK +R+E+ +F +K++ Y +L K
Sbjct: 205 LKEKWLQKLEEGLPKADLVIVLDASQDDSFSRKKSKRDRFEKNKNFSKKISRIYRRLAKK 264
Query: 189 NIWIDIDADKDIDTLGLIVKDI 210
+ W + +D +T I+K I
Sbjct: 265 HRWKMVSSDTKQNTHKEIMKII 286
>gi|300871563|ref|YP_003786436.1| thymidylate kinase [Brachyspira pilosicoli 95/1000]
gi|404476534|ref|YP_006707965.1| thymidylate kinase [Brachyspira pilosicoli B2904]
gi|431807687|ref|YP_007234585.1| thymidylate kinase [Brachyspira pilosicoli P43/6/78]
gi|434381627|ref|YP_006703410.1| thymidylate kinase [Brachyspira pilosicoli WesB]
gi|300689264|gb|ADK31935.1| thymidylate kinase [Brachyspira pilosicoli 95/1000]
gi|404430276|emb|CCG56322.1| thymidylate kinase [Brachyspira pilosicoli WesB]
gi|404438023|gb|AFR71217.1| thymidylate kinase [Brachyspira pilosicoli B2904]
gi|430781046|gb|AGA66330.1| thymidylate kinase [Brachyspira pilosicoli P43/6/78]
Length = 203
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 29/204 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G IV EG D SGK+T AKKL + LNKNNI + + P + D L K ++L
Sbjct: 2 KGKLIVIEGIDGSGKSTIAKKLAETLNKNNIETIYTFEPTNAYYGAKLRDTMLSKDMDLD 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTN--DRYSFSGVAF 124
+ LF +R E H L + +L++G T DRY +S +A+
Sbjct: 62 RELE--LFVDDRKE------------------HIRLMIKPSLEEGKTVVLDRYMYSSIAY 101
Query: 125 SAAKEGMDISWC-FQPEKGLPKPDAVLLFKLN-EEALQR---RKGFGDERYEQTDFQRKV 179
AK G+DI E + PD V +F L E++L R ++GF D R+E ++ +KV
Sbjct: 102 QGAK-GIDIEKIKNMHESFILIPDIVFIFHLPVEKSLNRIMEKRGFID-RFENEEYLKKV 159
Query: 180 AENYEKLKDNIWIDIDADKDIDTL 203
+ + I+ADK ID +
Sbjct: 160 DSIFSSFNEPFIYHINADKSIDDI 183
>gi|374635134|ref|ZP_09706738.1| thymidylate kinase [Methanotorris formicicus Mc-S-70]
gi|373563324|gb|EHP89523.1| thymidylate kinase [Methanotorris formicicus Mc-S-70]
Length = 185
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 86/187 (45%), Gaps = 28/187 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D SGKTTQAK L LN F + G +I E L+ + + +
Sbjct: 3 FIVFEGIDGSGKTTQAKLLAKKLN------AFYTYEPTDGLIGRLIREILKGEKKCEKET 56
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
L+F+A+R E H L EK + DRY +S +A+ + +
Sbjct: 57 LALMFAADRVE------------------HIRLIEEKLRESHVVCDRYLYSSIAYQTS-Q 97
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL--- 186
G+D + Q + KPD V+L ++ E +R G E +E+ F +KV Y +L
Sbjct: 98 GVDEDFILQINRFAKKPDVVVLLTVDIEEGIKRLGKEKEIFEKERFLKKVQNKYLELAKK 157
Query: 187 KDNIWID 193
+D I ID
Sbjct: 158 EDFIVID 164
>gi|183220659|ref|YP_001838655.1| thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
gi|189910761|ref|YP_001962316.1| thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167775437|gb|ABZ93738.1| Thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167779081|gb|ABZ97379.1| Thymidylate kinase (dTMP kinase) [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 203
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL- 65
+ F VFEG D SGKTT +KK+ + L+ +I + + P +I G I E+L+ KI+L
Sbjct: 4 KSQFFVFEGIDGSGKTTVSKKVSEILSTKSISNLWHREPTDSIH-GQKIREFLQGKIKLT 62
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
PD+ L +RE ++ + I L + S D DRY FS A+
Sbjct: 63 PDEQLKLFL----LDREFSVNETI-----LPTLKS--------DTCLVQDRYYFSTAAYQ 105
Query: 126 AAKE--GMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRR--KGFGDERYEQTDFQRKVA 180
E DI + +KG P+P+ V L+ EEAL+RR +G E ++ Q ++
Sbjct: 106 GRDEEHAADILY-MNEDKGFPEPNRVYFLDLSPEEALERRNTRGGNKEAFDDEKEQTRIY 164
Query: 181 ENYEKLKDNIWIDIDADKDI-DTLGLIVKDIVI 212
+NY + I +DA D+ + + V+DI++
Sbjct: 165 QNYLAILPESTIFVDATADLEEVVNFCVEDILL 197
>gi|332157932|ref|YP_004423211.1| thymidylate kinase [Pyrococcus sp. NA2]
gi|331033395|gb|AEC51207.1| thymidylate kinase [Pyrococcus sp. NA2]
Length = 205
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 94/200 (47%), Gaps = 46/200 (23%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDY---------LNKNNIPSQFVNFPDRTISTGHIIDE 57
+G FIVFEG D SGKTTQAK L + L K ++F + + G IID
Sbjct: 2 KGYFIVFEGIDGSGKTTQAKLLAKWFRDNGYEVLLTKEPTDTEFGKLIRKLVLEGSIIDG 61
Query: 58 YLRKKIELPDQAAHLLFSANRWE--REPTLTKLIEQGITLEIMHSSLENEKNLDQGCTND 115
+ +A LLF+A+R E ++ L L E I + C D
Sbjct: 62 S-----RISYEAEALLFAADRAEHVKKIILPALREGKIVI----------------C--D 98
Query: 116 RYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTD 174
RY +S +A+ A+ G+D+ W + P+ D V+L L ++L+R +G R +T+
Sbjct: 99 RYLYSSLAYQWAR-GLDLEWLIKVNSFAPRADLVILLDLPITKSLERIRG----RVIKTE 153
Query: 175 F------QRKVAENYEKLKD 188
F QRKV ENY KL +
Sbjct: 154 FDKLVELQRKVRENYLKLAE 173
>gi|18978102|ref|NP_579459.1| thymidylate kinase [Pyrococcus furiosus DSM 3638]
gi|397652623|ref|YP_006493204.1| thymidylate kinase [Pyrococcus furiosus COM1]
gi|23821777|sp|Q8U071.1|KTHY_PYRFU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|18893897|gb|AAL81854.1| thymidylate kinase (tmk) [Pyrococcus furiosus DSM 3638]
gi|393190214|gb|AFN04912.1| thymidylate kinase [Pyrococcus furiosus COM1]
Length = 210
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 103/218 (47%), Gaps = 50/218 (22%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDY---------LNKNNIPSQFVNFPDRTISTGHII 55
+ RG FIV EG D SGKTTQA+ L + L K ++F + + G II
Sbjct: 1 MKRGLFIVLEGIDGSGKTTQARLLARWFEDNGFKVVLTKEPTDTEFGKIIRKLVLEGSII 60
Query: 56 DEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CT 113
D +I L +A LLF+A+R E + K+IE L +G
Sbjct: 61 DG---GRISL--EAEALLFAADRAEH---VKKIIEPA---------------LREGKVVI 97
Query: 114 NDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQRRKGFGDERYEQ 172
+DRY +S +A+ A+ G+++ W + K P PD +L + E ++R K +R Q
Sbjct: 98 SDRYFYSSLAYQWAR-GLNLEWLIEINKFAPHPDIAILLDIPPREGIKRIK----KRSSQ 152
Query: 173 TDF------QRKVAENYEKLK---DNIWIDIDADKDID 201
T+F Q KV ENY KL D I I IDA K ++
Sbjct: 153 TEFDKLFKLQEKVRENYIKLAKMFDEIKI-IDATKSVE 189
>gi|14591458|ref|NP_143538.1| thymidylate kinase [Pyrococcus horikoshii OT3]
gi|6016461|sp|O59366.1|KTHY_PYRHO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|3258125|dbj|BAA30808.1| 205aa long hypothetical thymidylate kinase [Pyrococcus horikoshii
OT3]
Length = 205
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDY---------LNKNNIPSQFVNFPDRTISTGHIIDE 57
RG FIV EG D SGKTTQAK L ++ L K S+ R I +ID
Sbjct: 2 RGYFIVLEGIDGSGKTTQAKLLAEWFEDKGYEVLLTKEPTDSELGKLIRRIILEESVIDG 61
Query: 58 YLRKKIELPDQAAHLLFSANRWE--REPTLTKLIEQGITLEIMHSSLENEKNLDQGCTND 115
++ +A LLF+A+R E ++ L L E + + C D
Sbjct: 62 S-----KISYEAEALLFAADRAEHVKKIILPALSEGKVVI----------------C--D 98
Query: 116 RYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQRRK--GFGDERYEQ 172
RY +S +A+ A+ G+D++W Q P+PD +L L +E+L+R K G E +
Sbjct: 99 RYFYSSLAYQWAR-GLDLNWLIQVNSFAPRPDLAILLDLPVKESLRRIKLRGTLTEFDKI 157
Query: 173 TDFQRKVAENYEKLKD 188
+ QRKV NY KL +
Sbjct: 158 VELQRKVRHNYLKLAE 173
>gi|322695315|gb|EFY87125.1| thymidylate kinase [Metarhizium acridum CQMa 102]
Length = 206
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 112 CTNDRYSFSGVAFSAAK--EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER 169
+DR+ SG+ +SAAK + +SW PE+GLP+PD VL L+EE + R G+G E
Sbjct: 59 VISDRFYHSGIVYSAAKLNPSLPLSWARAPERGLPRPDLVLFLDLDEETARARGGWGGEL 118
Query: 170 YEQTDFQRKVAENYEKL 186
YE+ + QR+V E + L
Sbjct: 119 YEKAEMQRRVRELFWGL 135
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 22/32 (68%), Gaps = 4/32 (12%)
Query: 1 MASQIP----RGAFIVFEGCDRSGKTTQAKKL 28
MAS P RGAFIV EG DRSGKTTQ K L
Sbjct: 12 MASDTPSDVKRGAFIVLEGLDRSGKTTQVKLL 43
>gi|15668468|ref|NP_247266.1| thymidylate kinase [Methanocaldococcus jannaschii DSM 2661]
gi|2497577|sp|Q57741.1|KTHY_METJA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|1591015|gb|AAB98278.1| thymidylate kinase (tmk) [Methanocaldococcus jannaschii DSM 2661]
Length = 188
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 95/191 (49%), Gaps = 29/191 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D SGKTTQ+K L ++ F + G II E L K E+ ++
Sbjct: 6 FIVFEGIDGSGKTTQSKLLAKKMD------AFWTYEPSNSLVGKIIREILSGKTEVDNKT 59
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R E TKLI++ + K D C DRY +S +A+ +
Sbjct: 60 LALLFAADRIEH----TKLIKEEL------------KKRDVVC--DRYLYSSIAYQSV-A 100
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENYEKLKD 188
G+D ++ + KPD V L ++ E AL+R K + +E+ DF +KV + Y +L +
Sbjct: 101 GVDENFIKSINRYALKPDIVFLLIVDIETALKRVK--TKDIFEKKDFLKKVQDKYLELAE 158
Query: 189 NI-WIDIDADK 198
+I ID K
Sbjct: 159 EYNFIVIDTTK 169
>gi|339252100|ref|XP_003371273.1| thymidylate kinase [Trichinella spiralis]
gi|316968511|gb|EFV52782.1| thymidylate kinase [Trichinella spiralis]
Length = 118
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 110 QGCTNDRYSFSGVAFSA-AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDE 168
+ C F G+ S +G+D WC ++GLP+PD V + E L+ R FG E
Sbjct: 2 ENCRGALIVFEGLDRSGKTTQGLDFDWCMNADRGLPQPDVVFFVDVKPETLKNRGEFGVE 61
Query: 169 RYEQTDFQRKVAENYEKLKDNIW 191
R++ +FQRKV NY++L D W
Sbjct: 62 RFDDEEFQRKVRHNYQRLTDKYW 84
>gi|220917316|ref|YP_002492620.1| dTMP kinase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955170|gb|ACL65554.1| dTMP kinase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 219
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 31/187 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI------ 63
F+V EG D +G TTQA+ L + L + + P G ++ + L +++
Sbjct: 18 FVVLEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGG-PVGALVRQVLTRRVTGVAGA 76
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSG 121
+ A LLF+A+R + H ++E + L G +DRY+ S
Sbjct: 77 DFDPHALALLFAADRRD------------------HRAVEIDPKLAAGIDVVSDRYTLSS 118
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGDER--YEQTDFQRK 178
+A+ A G ++ W Q PDA L ++ E AL+RR+ +R YE FQRK
Sbjct: 119 LAYQGAALG-EMEWVRQVNGAAGPPDATLFLRVRPEVALRRRRAASLDREIYEVGAFQRK 177
Query: 179 VAENYEK 185
VA Y++
Sbjct: 178 VAAEYDR 184
>gi|197122531|ref|YP_002134482.1| dTMP kinase [Anaeromyxobacter sp. K]
gi|196172380|gb|ACG73353.1| dTMP kinase [Anaeromyxobacter sp. K]
Length = 219
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 31/187 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI------ 63
F+V EG D +G TTQA+ L + L + + P G ++ + L +++
Sbjct: 18 FVVLEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGG-PVGALVRQVLTRRVTGAAGA 76
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSG 121
+ A LLF+A+R + H ++E + L G +DRY+ S
Sbjct: 77 DFDPHALALLFAADRRD------------------HRAVEIDPKLAAGIDVVSDRYTLSS 118
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGDER--YEQTDFQRK 178
+A+ A G ++ W Q PDA L ++ E AL+RR+ +R YE FQRK
Sbjct: 119 LAYQGAALG-EMEWVRQVNGAAGPPDATLFLRVRPEVALRRRRAASLDREIYEVGAFQRK 177
Query: 179 VAENYEK 185
VA Y++
Sbjct: 178 VAAEYDR 184
>gi|14520694|ref|NP_126169.1| thymidylate kinase [Pyrococcus abyssi GE5]
gi|13629362|sp|Q9V1E9.1|KTHY_PYRAB RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|5457910|emb|CAB49400.1| tmk thymidylate kinase (dTMP kinase) [Pyrococcus abyssi GE5]
gi|380741227|tpe|CCE69861.1| TPA: thymidylate kinase [Pyrococcus abyssi GE5]
Length = 205
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 26/190 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK---- 62
RG F+V EG D SGKTTQAK L ++ + P T G +I E + K
Sbjct: 2 RGYFVVLEGIDGSGKTTQAKLLAEWFEEQGWDVLLTKEPTDT-EFGRLIRELVLKNSIID 60
Query: 63 -IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+ +A LLF+A+R E +++ +LE K DRY +S
Sbjct: 61 GSRISYEAEALLFAADRAEH------------VKKVILPALEKGKV----VICDRYLYSS 104
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQRRKGFGD--ERYEQTDFQRK 178
+A+ A+ G+ + W Q P+PD +L L +E+++R K G+ E + + QRK
Sbjct: 105 LAYQWAR-GLSLEWLMQINSFAPRPDLAILLDLPVKESIRRTKARGNMSEFDKLLELQRK 163
Query: 179 VAENYEKLKD 188
V NY KL +
Sbjct: 164 VRMNYLKLAE 173
>gi|86158146|ref|YP_464931.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774657|gb|ABC81494.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 218
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
RG F+V EG D +G TTQA+ L + L + + P G ++ + L +++
Sbjct: 14 RGRFVVVEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGG-PVGALVRQVLTRRVGGG 72
Query: 64 ---ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYS 118
+ A LLF+A+R + H ++E + L G +DRY+
Sbjct: 73 GGADFDPHALALLFAADRRD------------------HRAVEIDPKLAAGIDVVSDRYT 114
Query: 119 FSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGDER--YEQTDF 175
S +A+ A G ++ W PDA L ++ E AL+RR+ +R YE F
Sbjct: 115 LSSLAYQGAALG-EMEWVRTVNAAAGPPDATLFLRVRPEVALRRRRAASLDREIYEVGAF 173
Query: 176 QRKVAENYEK 185
QR+VA Y++
Sbjct: 174 QRRVAAEYDR 183
>gi|406960242|gb|EKD87363.1| Thymidylate kinase [uncultured bacterium]
Length = 218
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 34/212 (16%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS-TGHIIDEYLRKKI 63
+ +G IVFEG D SGK TQA+ LV YL +NI ++FP S G I ++ L K+
Sbjct: 1 MTQGKLIVFEGTDGSGKKTQAEFLVRYLTNHNISHATIDFPRYKESFFGSIAEDLLLGKL 60
Query: 64 --ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+P + A L F+ +RW+ + + +E G + ++RY+ S
Sbjct: 61 GENIPPKLAVLPFACDRWQIKNDVISWLEGG-----------------KIVLSNRYTASS 103
Query: 122 VAFSAAK-----EGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQR---RKGFGDERY 170
+ AAK + I W ++ E+ GLPK + VL F + E+ Q ++G + Y
Sbjct: 104 AVYHAAKLPQSEQQSFIEWVYKLEQEIIGLPKENLVLYFHMPVESAQSLIDKRGNTKDTY 163
Query: 171 EQ-TDFQRKVAENYEKLKDNI--WIDIDADKD 199
E+ T+ + V Y L W I KD
Sbjct: 164 EKDTELLKTVETLYLSLVARYPHWKMIQCTKD 195
>gi|71394067|gb|AAZ32106.1| thymidilate kinase [uncultured euryarchaeote Alv-FOS5]
Length = 212
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 91/206 (44%), Gaps = 30/206 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D SGK TQAK L L K V+FP+ G +I ++L KK+EL +
Sbjct: 4 FIVFEGIDASGKETQAKLLAKALKKKGHKVYMVDFPNYKNPIGKMIKKFLDKKVELDVET 63
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LL++A+R +TK ++ ++ DRY +S +A+ +
Sbjct: 64 RALLYAADRRYELKGITKALDD-----------------NKIVIADRYCYSNIAYQGSL- 105
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY------ 183
G +ISW + L PD V + + RR+ D + +F +V E Y
Sbjct: 106 GANISWLASLDATLVFPDLVFYLDIPAKESLRRRTRKDRYESKREFLERVRETYTNMATG 165
Query: 184 -----EKLKDNI-WIDIDADKDIDTL 203
EK KD WI +D ID +
Sbjct: 166 NMRPFEKYKDYAEWITVDGTLPIDII 191
>gi|384207683|ref|YP_005593403.1| thymidylate kinase [Brachyspira intermedia PWS/A]
gi|343385333|gb|AEM20823.1| thymidylate kinase [Brachyspira intermedia PWS/A]
Length = 203
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G IV EG D SGK++ L D LN I S + P + + L K ++
Sbjct: 2 KGKLIVLEGIDGSGKSSIGMMLTDALNSLGIKSIYTFEPTHAYYGSKLRESMLSKDLKPE 61
Query: 67 DQAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
++ + LF A+R E + K I G + + DRY +S +A+
Sbjct: 62 EELS--LFIADRKEHIKHMIKPAINDGYVIVL-----------------DRYMYSSIAYQ 102
Query: 126 AAKEGMDISWCFQPEKG-LPKPDAVLLFKLN-EEALQR---RKGFGDERYEQTDFQRKVA 180
AK G+D + + K + +PD V + LN E AL R ++GF D R+E + +V
Sbjct: 103 GAK-GIDKEYIYNLHKDFILEPDLVFILHLNIETALNRIMEKRGFVD-RFENKHYLEEVD 160
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ + + IDA K ++ +KD +++TIK+S+ PL+S
Sbjct: 161 KVFYSFNASYIHHIDASKTQES----IKDEILNTIKESKILPLDS 201
>gi|409095120|ref|ZP_11215144.1| thymidylate kinase [Thermococcus zilligii AN1]
Length = 208
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 91/194 (46%), Gaps = 37/194 (19%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDY---------LNKNNIPSQFVNFPDRTISTG---HII 55
G FIV EG D +GK+TQAK L ++ L K + F R + TG II
Sbjct: 2 GIFIVLEGIDGAGKSTQAKMLAEWFEKRGYEVVLTKEPTDTAFGKLIRRLVLTGGREGII 61
Query: 56 DEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTND 115
D + +A LLF+A+R E + KLI SLE K +D
Sbjct: 62 D-----GARISHEAEALLFAADRAEH---VDKLI---------RPSLEAGKV----VISD 100
Query: 116 RYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQR--RKGFGDERYEQ 172
RY +S +A+ A+ G+D+ W + +PD +L L +E+++R R+ E +
Sbjct: 101 RYFYSSLAYQWAR-GLDLEWLIDLNRFAIRPDLAVLLDLPVKESMRRINRRSLKSEFDKI 159
Query: 173 TDFQRKVAENYEKL 186
+ QRKV ENY KL
Sbjct: 160 AELQRKVRENYLKL 173
>gi|337283718|ref|YP_004623192.1| thymidylate kinase [Pyrococcus yayanosii CH1]
gi|334899652|gb|AEH23920.1| thymidylate kinase [Pyrococcus yayanosii CH1]
Length = 205
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 88/196 (44%), Gaps = 38/196 (19%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDY---------LNKNNIPSQFVNFPDRTISTGHIIDEY 58
G FIVFEG D +GK+TQA+ L ++ L K S+ NF R I
Sbjct: 3 GLFIVFEGIDGAGKSTQARLLAEWFREKGYDVVLTKEPTDSELGNFVKRLILI-----GG 57
Query: 59 LRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDR 116
+ + +A LLF+A+R E + K+IE L +G +DR
Sbjct: 58 IINGGRISHEAEALLFAADRAEH---VKKVIEPA---------------LREGKVVISDR 99
Query: 117 YSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR---KGFGDERYEQT 173
Y +S +A+ A+ G+D+ W P+P V+L L + RR +G E +
Sbjct: 100 YFYSSLAYQWAR-GLDVEWLISVNSFAPRPHLVILLDLPAKESMRRVRLRGAESEFDKLL 158
Query: 174 DFQRKVAENYEKLKDN 189
+ QRKV ENY KL +
Sbjct: 159 ELQRKVRENYLKLAER 174
>gi|333910307|ref|YP_004484040.1| thymidylate kinase [Methanotorris igneus Kol 5]
gi|333750896|gb|AEF95975.1| Thymidylate kinase [Methanotorris igneus Kol 5]
Length = 198
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 86/188 (45%), Gaps = 26/188 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D SGKTTQAK L LN F G +I E L+ K + +
Sbjct: 6 FIVFEGIDGSGKTTQAKLLTKKLN------AFYTCEPTEGQIGRLIREILKGKKKCEKET 59
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R E H L EK + DRY +S +A+ + +
Sbjct: 60 LALLFAADRVE------------------HVKLIEEKLKESHVVCDRYLYSSIAYQTS-Q 100
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL-KD 188
G+D + Q + KPD V+L ++ E +R G E +E+ +F +KV Y KL K
Sbjct: 101 GVDEDFILQINRFAKKPDIVVLLTVDVEEGMKRLGKEKEIFEKEEFLKKVQNKYLKLAKK 160
Query: 189 NIWIDIDA 196
+I ID
Sbjct: 161 EGFIVIDT 168
>gi|189210088|ref|XP_001941376.1| thymidylate kinase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977469|gb|EDU44095.1| thymidylate kinase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 136
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 115 DRYSFSGVAFSAAKEG--MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ 172
DRY +SG +SAAK+ M + WC PE GLP+PD + ++ E +R G+G E+YE+
Sbjct: 42 DRYYYSGCVYSAAKQNPNMSLEWCRNPELGLPRPDLCIFLDISAEDAAKRGGYGAEKYEK 101
Query: 173 TDFQRKVAENYEKL 186
D Q +V +E L
Sbjct: 102 KDMQDRVRVLFETL 115
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHI 54
+ RG IVFEG DR+GK+TQ +KLV+ L + + + + FPDR +G +
Sbjct: 1 MARGKLIVFEGLDRAGKSTQCQKLVEDLQNDGVKVRHMRFPDRYYYSGCV 50
>gi|118576712|ref|YP_876455.1| thymidylate kinase [Cenarchaeum symbiosum A]
gi|118195233|gb|ABK78151.1| thymidylate kinase [Cenarchaeum symbiosum A]
Length = 186
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
IV EGCD++GK TQA L LN+ ++ FPD T G ++ + L + P +
Sbjct: 7 IIVIEGCDQAGKQTQAGLLAGALNRKGRKARVFAFPDYTTPVGKMMKKQLEGRGFEP-RV 65
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
H L +ANRWE+ + + G ++ I+ DRY S + +
Sbjct: 66 FHCLAAANRWEKAGEI-RAASSGGSVAIL----------------DRYRQSNMVYGVL-N 107
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRK 163
G+ W + GLP+ D V+L + ++ RRK
Sbjct: 108 GLSRRWLAGLDAGLPRADVVILLDIKQKEAFRRK 141
>gi|341581851|ref|YP_004762343.1| thymidylate kinase [Thermococcus sp. 4557]
gi|340809509|gb|AEK72666.1| thymidylate kinase [Thermococcus sp. 4557]
Length = 207
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 39/197 (19%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDY---------LNKNNIPSQFVNFPDRTISTGHIIDEY 58
GAFIV EG D +GK+TQAK L ++ L K + F + + TG E
Sbjct: 2 GAFIVIEGIDGAGKSTQAKLLAEWFEEKGHEVVLTKEPTDTAFGKLIRKLVLTGG--KEG 59
Query: 59 LRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
+ + +A LLF+A+R E L K S+E K +DRY
Sbjct: 60 IIDGARISHEAEALLFAADRAEHVSKLIK------------PSVEAGKI----VISDRYF 103
Query: 119 FSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQRRKGFGDERYEQTDF-- 175
+S +A+ A+ G+D+ W + +PD V+L L +E+++R G R +T+F
Sbjct: 104 YSSLAYQWAR-GLDLEWLIDLNRFAVRPDLVILLDLPVKESMKRING----RSIKTEFDK 158
Query: 176 ----QRKVAENYEKLKD 188
Q+KV ENY KL +
Sbjct: 159 IVELQKKVRENYLKLAE 175
>gi|315229969|ref|YP_004070405.1| thymidylate kinase [Thermococcus barophilus MP]
gi|315182997|gb|ADT83182.1| thymidylate kinase [Thermococcus barophilus MP]
Length = 209
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 91/190 (47%), Gaps = 29/190 (15%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL----RKKI 63
G FIV EG D +GK+TQAK L + K P T + G +I + + R+ I
Sbjct: 2 GIFIVIEGIDGAGKSTQAKLLAKWFEKRGYNVVLTKEPTDT-AFGKLIRKLVLTGGREGI 60
Query: 64 ----ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
++ +A LLF+A+R E + KLIE SL K +DRY +
Sbjct: 61 IDGAKISHEAEALLFAADRAEH---VKKLIE---------PSLRTGKV----VISDRYFY 104
Query: 120 SGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQRRKG--FGDERYEQTDFQ 176
S +A+ A+ G+D+ W K +PD V+L L +E+++R G E + Q
Sbjct: 105 SSLAYQWAR-GLDLEWLINLNKFAIRPDLVILLDLPVKESMKRINGRQLKSEFDRIAELQ 163
Query: 177 RKVAENYEKL 186
+KV ENY KL
Sbjct: 164 KKVRENYLKL 173
>gi|289192999|ref|YP_003458940.1| thymidylate kinase [Methanocaldococcus sp. FS406-22]
gi|288939449|gb|ADC70204.1| thymidylate kinase [Methanocaldococcus sp. FS406-22]
Length = 185
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D SGKTTQ+K L + LN F + G I E L +++ ++
Sbjct: 2 FIVFEGIDGSGKTTQSKLLAEKLN------AFWTYEPSDSEIGRFIREILSGNVKVDNKT 55
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R E H+ L E+ + DRY +S +A+ +
Sbjct: 56 LALLFAADRVE------------------HTKLIKEELKKRAVVCDRYLYSSIAYQSVA- 96
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENYEKLKD 188
G+D ++ + +PD V L ++ E AL+R K + +E+ DF KV Y +L +
Sbjct: 97 GVDENFIKSINRYALEPDIVFLLVVDIETALKRVK--TKDIFEKKDFLEKVQNKYLELAE 154
Query: 189 NI-WIDIDADK 198
+I ID K
Sbjct: 155 EYNFIVIDTTK 165
>gi|297619540|ref|YP_003707645.1| thymidylate kinase [Methanococcus voltae A3]
gi|297378517|gb|ADI36672.1| thymidylate kinase [Methanococcus voltae A3]
Length = 223
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D SGK+TQAK L D +N +++ G +I + L + +
Sbjct: 28 FIVFEGIDGSGKSTQAKMLADRIN------AILDYEPTNSEVGKLIRKGLSEGC-FEKET 80
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+ +R E L K +E+ + C DRY +S + + +
Sbjct: 81 LALLFAGDRVEHCKELAKKLEKNHIV----------------C--DRYVYSSIVYQNT-Q 121
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR---KGFGDERYEQTDFQRKVAENYEKL 186
G+DI + + + PD V+L LN E R + +E +E+ +FQ+ + E Y ++
Sbjct: 122 GIDIEYIYNINRYARVPDIVVLLDLNPELSMLRVNDRTGNNEIFEKIEFQKIIREKYLQI 181
Query: 187 -------------KDNIWIDIDADKDIDTLGLIVKDIV 211
K I+I IDA+K I L + D++
Sbjct: 182 FEDEKNKNKKSMFKPPIYIKIDANKSILELHNEIYDLI 219
>gi|390937964|ref|YP_006401702.1| thymidylate kinase [Desulfurococcus fermentans DSM 16532]
gi|390191071|gb|AFL66127.1| thymidylate kinase [Desulfurococcus fermentans DSM 16532]
Length = 206
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 26/210 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FIV EG D +GKTT A++LV+ L+ IP+ + P + I Y +
Sbjct: 4 KGCFIVLEGLDGAGKTTIARRLVEDLSSRGIPASYTYEPTDSEIVRLIKSTYNNLRDAYI 63
Query: 67 DQAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D A F+ +R L K L+++G+T+ +DRY +S VA+
Sbjct: 64 DALA---FALDRLIHVKNLVKPLLDRGVTV-----------------ISDRYFYSSVAYQ 103
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER---YEQTDFQRKVAEN 182
+A G W + K KPD + + E RK R YE+ +F ++V
Sbjct: 104 SAS-GAPFEWVIEVNKFAMKPDVAIYLDIEPEEGLSRKYMHTSRFPEYEEKEFLQRVRSM 162
Query: 183 YEKLKD-NIWIDIDADKDIDTLGLIVKDIV 211
Y ++ + + I IDA K + + + DIV
Sbjct: 163 YLRMVEMGLLIYIDASKPLSEVYDRIWDIV 192
>gi|296126817|ref|YP_003634069.1| thymidylate kinase [Brachyspira murdochii DSM 12563]
gi|296018633|gb|ADG71870.1| thymidylate kinase [Brachyspira murdochii DSM 12563]
Length = 203
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G IV EG D SGK+T L + LN I S + P + + L K ++ +
Sbjct: 3 GKLIVIEGIDGSGKSTHGMLLTNELNNIGIKSIYTFEPTHAYFGSKLRESMLSKDLKPEE 62
Query: 68 QAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ + LF A+R E + K I G + + DRY +S +A+
Sbjct: 63 ELS--LFIADRKEHVQNMIKPAINDGYAVIL-----------------DRYMYSSIAYQG 103
Query: 127 AKEGMDISWCFQPEKG-LPKPDAVLLFKLN-EEALQR---RKGFGDERYEQTDFQRKVAE 181
AK G+D + + K + +PD V +F L E AL R ++GF D R+E ++ +KV E
Sbjct: 104 AK-GIDREYIYNLHKDFIIEPDLVFIFHLPIETALNRIMEKRGFVD-RFENKNYLKKVDE 161
Query: 182 NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ I+ADKD + L K+ ++ I+ S+ PL+S
Sbjct: 162 IFSSFNAANIHHINADKDEEAL----KNELMQIIRDSKILPLDS 201
>gi|225620556|ref|YP_002721813.1| thymidylate kinase [Brachyspira hyodysenteriae WA1]
gi|254808280|sp|C0R1X1.1|KTHY_BRAHW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|225215375|gb|ACN84109.1| thymidylate kinase [Brachyspira hyodysenteriae WA1]
Length = 203
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G IV EG D SGK++ L D LN I S + P + + L K +
Sbjct: 2 KGKLIVLEGIDGSGKSSIGMMLTDILNNIGIKSIYTFEPTHAYYGSKLRESMLSKDLTPE 61
Query: 67 DQAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
++ + LF A+R E + + I G + + DRY S +A+
Sbjct: 62 EELS--LFIADRKEHIKHMIRPAINDGYVIVL-----------------DRYMHSSIAYQ 102
Query: 126 AAKEGMDISWCFQPEKG-LPKPDAVLLFKLN-EEALQR---RKGFGDERYEQTDFQRKVA 180
AK G+D + + K + +PD V + LN E AL R ++GF D R+E + +V
Sbjct: 103 GAK-GIDKEYIYNLHKDFILEPDLVFILHLNIETALNRIMEKRGFVD-RFENKHYLEEVD 160
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ + + IDA KD + + D +++TIK+S+ PL+S
Sbjct: 161 KIFSSFNEPYMHHIDASKDQKS----ICDEILNTIKESKILPLDS 201
>gi|375083214|ref|ZP_09730244.1| thymidylate kinase [Thermococcus litoralis DSM 5473]
gi|374742168|gb|EHR78576.1| thymidylate kinase [Thermococcus litoralis DSM 5473]
Length = 209
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDY---------LNKNNIPSQFVNFPDRTISTGHIIDEY 58
G FIV EG D +GK+TQAK L + L K + F R + TG E
Sbjct: 2 GMFIVLEGIDGAGKSTQAKMLAKWFENKGYEVVLTKEPTDTAFGKLIRRLVLTGG--KEG 59
Query: 59 LRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
+ + +A LLF+A+R E + KLIE + + +DRY
Sbjct: 60 IIDGARISKEAEALLFAADRAEH---VKKLIEPSL-------------KAGKVVISDRYF 103
Query: 119 FSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQRRKG--FGDERYEQTDF 175
+S +A+ A+ G+D+ W P+ D V+L L +E+++R G E + +
Sbjct: 104 YSSLAYQWAR-GLDLEWLINLNAFAPRADLVILLDLPVKESIKRINGRSIRSEFDKIVEL 162
Query: 176 QRKVAENYEKLKD 188
Q+KV ENY KL +
Sbjct: 163 QKKVRENYLKLAE 175
>gi|302813858|ref|XP_002988614.1| hypothetical protein SELMODRAFT_427260 [Selaginella moellendorffii]
gi|300143721|gb|EFJ10410.1| hypothetical protein SELMODRAFT_427260 [Selaginella moellendorffii]
Length = 399
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 20/114 (17%)
Query: 44 FPDRTISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLE 103
+P RT ++ +L + EL D+A H+LFS NRWE+ + + TL +
Sbjct: 4 WPARTSRLRCLL--FLGRGAELDDRAVHILFSPNRWEKRLQMENKLMARTTLVV------ 55
Query: 104 NEKNLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE 157
DRYS+SGVAFSAAK G+D+ WC PE L D VL ++ E
Sbjct: 56 -----------DRYSYSGVAFSAAK-GLDLEWCKAPEVELLAADLVLYLDISPE 97
>gi|218883455|ref|YP_002427837.1| thymidylate kinase [Desulfurococcus kamchatkensis 1221n]
gi|218765071|gb|ACL10470.1| thymidylate kinase [Desulfurococcus kamchatkensis 1221n]
Length = 206
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 38/216 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPD-----RTISTGH--IIDEYL 59
+G FIV EG D +GKTT A++LV+ L+ IP+ + P R I + + + D Y+
Sbjct: 4 KGCFIVLEGLDGAGKTTVARRLVEDLSSRGIPASYTYEPTDSEIVRVIKSTYNNLRDAYI 63
Query: 60 RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
D+ H+ W + L+++G+T+ +DRY +
Sbjct: 64 DALAFALDRLIHV----KNW-----VKPLLDKGVTV-----------------ISDRYFY 97
Query: 120 SGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER---YEQTDFQ 176
S VA+ +A G W + K KPD + + E RK R YE+ +F
Sbjct: 98 SSVAYQSAS-GAPFEWVIEVNKFAMKPDVAIYLDIEPEEGLSRKHMHTSRFPEYEEKEFL 156
Query: 177 RKVAENYEKLKD-NIWIDIDADKDIDTLGLIVKDIV 211
++V Y ++ + + I IDA K + + + DIV
Sbjct: 157 QRVRSMYLRMVEMGLLIYIDASKPLSEVYGRIWDIV 192
>gi|150399111|ref|YP_001322878.1| thymidylate kinase [Methanococcus vannielii SB]
gi|166221757|sp|A6UP44.1|KTHY_METVS RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|150011814|gb|ABR54266.1| dTMP kinase [Methanococcus vannielii SB]
Length = 198
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 27/180 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D SGKTTQAK L + LN +++ P T G I E L E +
Sbjct: 4 FIVFEGIDGSGKTTQAKMLAEKLN-----AEYTCEPT-TGKIGRTIREVLSGS-ECKKET 56
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R E + K++++ DRY +S + + +
Sbjct: 57 LALLFAADRVEHVSEIEKMLQKS------------------HVVTDRYVYSSIIYQTM-Q 97
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENYEKLKD 188
G+ + + PD V++ ++ EEAL+R + E +E+ +FQ+K+ + Y K+ +
Sbjct: 98 GISKEFIYSINFFAKIPDIVVILDVDTEEALKRMEFREKEIFEKIEFQKKIKQEYHKIAE 157
>gi|323701668|ref|ZP_08113340.1| thymidylate kinase [Desulfotomaculum nigrificans DSM 574]
gi|323533441|gb|EGB23308.1| thymidylate kinase [Desulfotomaculum nigrificans DSM 574]
Length = 215
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK--IEL 65
G FIVFEG D SGKTTQ L YL N+I + P T G I E L I++
Sbjct: 11 GIFIVFEGVDGSGKTTQLSLLNKYLCANHIATYATREPGGT-PLGEKIRELLLNPDFIDM 69
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRYSFSGVA 123
+ LL++A R +L+ Q E L QG DRY S +A
Sbjct: 70 QSRTEALLYAAAR-------AQLVAQ-----------EIRPRLQQGTVVLCDRYIDSSLA 111
Query: 124 FSAAKEGMDISWCF---QPEKGLPKPDAVLLFKL-NEEALQRRKGFGDE---RYEQTDFQ 176
+ GMDI + Q G P V+L L EE L R + G E DF
Sbjct: 112 YQGYGRGMDIDFLIKINQLGTGGLNPQLVILLDLPPEEGLIRSRKVGPADRLENEALDFH 171
Query: 177 RKVAENYEKLK---DNIWIDIDADKDIDTL 203
R+V Y +L + ++ +DA + I TL
Sbjct: 172 RRVRAGYLELARKNPDRYLVLDARESIQTL 201
>gi|333922277|ref|YP_004495857.1| thymidylate kinase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333747838|gb|AEF92945.1| Thymidylate kinase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 207
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK--IEL 65
G FIVFEG D SGKTTQ L YL N+I + P T G I E L I++
Sbjct: 3 GIFIVFEGVDGSGKTTQLSLLNKYLCANHIATYATREPGGT-PLGEKIRELLLNPDFIDM 61
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRYSFSGVA 123
+ LL++A R +L+ Q E L QG DRY S +A
Sbjct: 62 QSRTEALLYAAAR-------AQLVAQ-----------EIRPRLQQGTVVLCDRYIDSSLA 103
Query: 124 FSAAKEGMDISWCF---QPEKGLPKPDAVLLFKL-NEEALQRRKGFGDE---RYEQTDFQ 176
+ GMDI + Q G P V+L L EE L R + G E DF
Sbjct: 104 YQGYGRGMDIDFLIKINQLGTGGLNPQLVILLDLPPEEGLIRSRKVGPADRLENEALDFH 163
Query: 177 RKVAENYEKLK---DNIWIDIDADKDIDTL 203
R+V Y +L + ++ +DA + I TL
Sbjct: 164 RRVRAGYLELARKNPDRYLVLDARESIQTL 193
>gi|398343136|ref|ZP_10527839.1| thymidylate kinase [Leptospira inadai serovar Lyme str. 10]
Length = 228
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 9 AFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKKIELPD 67
F VFEG D SGK+T ++ L D L++ ++P+ + F + T TG + ++LR +IEL
Sbjct: 31 GFFVFEGLDGSGKSTLSRYLFDRLSQQSVPA--ICFAEPTQYETGQYLRKFLRGEIELSG 88
Query: 68 QAAHLLFSANR---WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ F +R E+ L L E I L LD+ + SG AF
Sbjct: 89 EEQIQAFLKDRKVSLEKN-VLPALAEGKIVL------------LDRYMYSTAAYQSGPAF 135
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGF--GDERYEQTDFQRKVAE 181
S ++E + + E+G P+PD + L+ E AL+R +G ER+E + RK+
Sbjct: 136 S-SQEILKRNL----EQGFPQPDLLFYLDLDPELALERMEGRENSKERFESLEVLRKIRN 190
Query: 182 NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
+YE + + I +DA K L DIV++ I
Sbjct: 191 SYENILPSSTIRLDARKTSTELA----DIVLEKI 220
>gi|404372686|ref|ZP_10977981.1| thymidylate kinase [Clostridium sp. 7_2_43FAA]
gi|226911179|gb|EEH96380.1| thymidylate kinase [Clostridium sp. 7_2_43FAA]
Length = 209
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 35/226 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL--RKKIE 64
+G FIVFEG D SGK+T + DYL +NNI P I I E + K +
Sbjct: 3 KGKFIVFEGGDGSGKSTILDMVYDYLIENNIECIKTREPG-GIKISEDIREVILDTKNTK 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRYSFSGV 122
+ + LL++A R R+ + K+I + +D+G DR+ +S +
Sbjct: 62 MDSRTEALLYAAAR--RQHLVEKVIPE----------------IDRGAIVLCDRFIYSSL 103
Query: 123 AFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRKGFGDER------YEQT 173
A+ + I +Q K G PD +LF L+ E R ER E+
Sbjct: 104 AYQGYARNIGIDEIYQINKFAVGEYMPDLNILFDLSPEIGLERINKNKEREINRLDLEKI 163
Query: 174 DFQRKVAENYEKLKD---NIWIDIDADKDIDTLGLIVKDIVIDTIK 216
DF KV + Y KL + ++ I+A+K I+ + +VK+I+ D IK
Sbjct: 164 DFHNKVRDGYLKLYEENKEKFVKINAEKSIEEVFNVVKEIITDFIK 209
>gi|297526188|ref|YP_003668212.1| thymidylate kinase [Staphylothermus hellenicus DSM 12710]
gi|297255104|gb|ADI31313.1| thymidylate kinase [Staphylothermus hellenicus DSM 12710]
Length = 199
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 32/216 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G F+V EG D +GKT+ A KL+D+L + + P T+ E L+KK +
Sbjct: 6 GFFLVLEGIDGAGKTSIAFKLMDFLVEKGFSVHYTYEPYDTLYV-----EALKKKYDEYR 60
Query: 68 QAA--HLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVA 123
A L ++A+R ++H + L +G DRY +S A
Sbjct: 61 DAYLDALTYAADR------------------LVHIRTDILPYLRRGYVVICDRYYYSSAA 102
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGDE--RYEQTDFQRKVA 180
+ +A +G I W + K KPD + ++ ++RR+G YE+ DF KV
Sbjct: 103 YQSA-QGAPIEWVLEINKYALKPDLTIYLDVDPHIGVKRREGLNTRFPEYEKLDFLYKVR 161
Query: 181 ENYEKL-KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
ENY L K + +DA+++ D + V+ IV + I
Sbjct: 162 ENYLWLVKKGYMVLVDANREFDKVYRDVEKIVFEHI 197
>gi|240103826|ref|YP_002960135.1| thymidylate kinase [Thermococcus gammatolerans EJ3]
gi|259494283|sp|C5A1K2.1|KTHY_THEGJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|239911380|gb|ACS34271.1| Thymidylate kinase (dTMP kinase) (tmk) [Thermococcus gammatolerans
EJ3]
Length = 208
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 37/196 (18%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL----RKKI 63
G F+V EG D +GK+TQAK L + K P T + G +I + + R+ I
Sbjct: 2 GIFVVIEGIDGAGKSTQAKLLAKWFEKKGYEVILTKEPTDT-AFGKLIRKLVLTGGREGI 60
Query: 64 ----ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
+ +A LLF+A+R E L K +LE+ K +DRY +
Sbjct: 61 IDGARISHEAEALLFAADRAEHVHKLIK------------PALESGKV----VISDRYFY 104
Query: 120 SGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQRRKGFGDERYEQTDF--- 175
S +A+ A+ G+D+ W + +PD V+L L +E+++R G R +T+F
Sbjct: 105 SSLAYQWAR-GLDLQWLIDLNRFAVRPDLVVLLDLPVKESMRRING----RSIKTEFDKI 159
Query: 176 ---QRKVAENYEKLKD 188
Q++V ENY KL +
Sbjct: 160 VELQKRVRENYLKLAE 175
>gi|334338718|ref|YP_004543698.1| thymidylate kinase [Desulfotomaculum ruminis DSM 2154]
gi|334090072|gb|AEG58412.1| thymidylate kinase [Desulfotomaculum ruminis DSM 2154]
Length = 207
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 94/212 (44%), Gaps = 32/212 (15%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ +G FIVFEG D SGK+TQ L YL IP+ P T G I E+L +
Sbjct: 1 MSKGLFIVFEGVDGSGKSTQLDLLNKYLTARQIPTCATREPGGT-PVGEKIREFLLDPVF 59
Query: 64 -ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRYSFS 120
E+ LL++A R +L+ Q I L+QG DRY S
Sbjct: 60 QEMQGHTESLLYAAAR-------AQLVAQVI-----------RPALEQGTVVLCDRYIDS 101
Query: 121 GVAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKL-NEEALQR-RKGFGDERYEQ--T 173
+A+ G+DI + + + G +P L L EE L R R+ +R E
Sbjct: 102 SLAYQGYGRGLDIEFLKKINELGTGGLQPHITFLLSLPPEEGLARSRRTKSADRLENEAM 161
Query: 174 DFQRKVAENYEKL--KDNIWIDIDADKDIDTL 203
DF R+V Y L ++ ++ +DA + I+TL
Sbjct: 162 DFHRRVWTGYLALARQNQSYVVLDARRSIETL 193
>gi|126465530|ref|YP_001040639.1| thymidylate kinase [Staphylothermus marinus F1]
gi|166223119|sp|A3DM71.1|KTHY_STAMF RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|126014353|gb|ABN69731.1| thymidylate kinase [Staphylothermus marinus F1]
Length = 199
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 32/216 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G F+V EG D +GKT+ A KL D+L + + P T+ E L+KK
Sbjct: 6 GFFLVLEGIDGAGKTSIAFKLRDFLVEKGFNVHYTYEPYNTLYV-----EALKKKYNEYR 60
Query: 68 QAA--HLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVA 123
A L ++A+R ++H E L +G DRY +S A
Sbjct: 61 DAYLDALTYAADR------------------LVHIRTEILPYLRRGYIVICDRYYYSSAA 102
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGDE--RYEQTDFQRKVA 180
+ +A +G I W + K KPD + ++ ++RRKG YE+ DF +V
Sbjct: 103 YQSA-QGAPIEWVLEINKYALKPDLTIYLDVDPAIGVKRRKGLNTRFPEYEKLDFLYRVR 161
Query: 181 ENYEKLKDNIW-IDIDADKDIDTLGLIVKDIVIDTI 215
ENY L D + + +DA+++ D + V+ IV++ +
Sbjct: 162 ENYLWLVDKGYMVLVDANREFDKVYRDVEKIVLEHL 197
>gi|429123165|ref|ZP_19183698.1| thymidylate kinase [Brachyspira hampsonii 30446]
gi|426280978|gb|EKV57981.1| thymidylate kinase [Brachyspira hampsonii 30446]
Length = 203
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G IV EG D SGK++ L D LN I S + P + + L K ++ +
Sbjct: 3 GKLIVLEGIDGSGKSSIGMMLTDTLNSLGIKSIYTFEPTHAYYGSKLRESMLSKDLKPEE 62
Query: 68 QAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ + LF A+R E + K I G + + DRY +S +A+
Sbjct: 63 ELS--LFIADRKEHIKHMIKPAINDGYVIVL-----------------DRYIYSSIAYQG 103
Query: 127 AKEGMDISWCFQPEKG-LPKPDAVLLFKLN-EEALQR---RKGFGDERYEQTDFQRKVAE 181
AK G+D + + K + +PD V + L+ E AL R ++GF D R+E ++ +V +
Sbjct: 104 AK-GIDKEYIYNLHKDFILQPDIVFILHLDIETALNRIMEKRGFVD-RFENKNYLEEVDK 161
Query: 182 NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
+ + IDA K + +KD +++TIK+S+ PL S
Sbjct: 162 IFCSFDASYIHHIDASKSQQS----IKDEILNTIKESKILPLNS 201
>gi|57641338|ref|YP_183816.1| thymidylate kinase [Thermococcus kodakarensis KOD1]
gi|73920827|sp|Q5JH21.1|KTHY_PYRKO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|57159662|dbj|BAD85592.1| thymidylate kinase [Thermococcus kodakarensis KOD1]
Length = 205
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 33/208 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDY---------LNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
FIV EG D +GK+TQAK L ++ L K + F R + TG E +
Sbjct: 2 FIVLEGIDGAGKSTQAKLLAEWFENRGYEVVLTKEPTDTPFGKLIRRLVLTGG--KEGII 59
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
++ +A LLF+A+R E L K SLE K +DRY +S
Sbjct: 60 DGAKISHEAEALLFAADRAEHVDKLIK------------PSLEAGKV----VISDRYFYS 103
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQ--RRKGFGDERYEQTDFQR 177
+A+ A+ G+D+ W + KPD V L L +E++ R + E + + QR
Sbjct: 104 SLAYQWAR-GLDLEWLIDLNRFAVKPDIVFLLDLPVKESMNRIRSRKVKSEFDKIFELQR 162
Query: 178 KVAENYEKLKDNI--WIDIDADKDIDTL 203
KV ENY KL + I+A +D++T+
Sbjct: 163 KVRENYLKLAEMFPEMKIINAMEDVETV 190
>gi|223478383|ref|YP_002582838.1| thymidylate kinase [Thermococcus sp. AM4]
gi|214033609|gb|EEB74436.1| Thymidylate kinase [Thermococcus sp. AM4]
Length = 227
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 37/196 (18%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL----RKKI 63
G F+V EG D +GK+TQAK L + + P T + G +I + + R+ I
Sbjct: 21 GIFVVIEGIDGAGKSTQAKLLAKWFERKGYEVVLTKEPTDT-AFGKLIRKLVLTGGREGI 79
Query: 64 ----ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
+ +A LLF+A+R E L + +LE+ K +DRY +
Sbjct: 80 IDGARISHEAEALLFAADRAEHVHKLIR------------PALESGKV----VISDRYFY 123
Query: 120 SGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQRRKGFGDERYEQTDF--- 175
S +A+ A+ G+D+ W + +PD V+L L +E+++R G R +T+F
Sbjct: 124 SSLAYQWAR-GLDLQWLIDLNRFAVRPDLVVLLDLPVKESMRRING----RSIKTEFDKI 178
Query: 176 ---QRKVAENYEKLKD 188
Q+KV ENY KL +
Sbjct: 179 LELQKKVRENYLKLAE 194
>gi|396497708|ref|XP_003845041.1| hypothetical protein LEMA_P003490.1 [Leptosphaeria maculans JN3]
gi|312221622|emb|CBY01562.1| hypothetical protein LEMA_P003490.1 [Leptosphaeria maculans JN3]
Length = 97
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 115 DRYSFSGVAFSAAKE--GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ 172
DRY +SG +SAAK+ + + W PE GLP+PD + ++ E +R G+G E+YE+
Sbjct: 13 DRYYYSGCVYSAAKQNPSLSLEWSRHPEVGLPRPDLCVFLDISAEEAAKRGGYGSEKYEK 72
Query: 173 TDFQRKVAENYEKL 186
+ Q +V E +E +
Sbjct: 73 KEMQDRVRELFEMM 86
>gi|296242887|ref|YP_003650374.1| thymidylate kinase [Thermosphaera aggregans DSM 11486]
gi|296095471|gb|ADG91422.1| thymidylate kinase [Thermosphaera aggregans DSM 11486]
Length = 203
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 28/207 (13%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
SQ RG FIV EG D +GKTT AK L+D + + + P ++ + +Y
Sbjct: 2 SQSNRGFFIVLEGIDGAGKTTLAKMLIDKFKSKGLDAIYTYEPTDSLIVKAVKGDY---- 57
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRYSFS 120
P + A++ A +R + KLI L +G T +DRY +S
Sbjct: 58 --SPYRDAYIDALAFALDRLIHVKKLILP---------------MLGKGVTVISDRYFYS 100
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGDE--RYEQTDFQR 177
+A+ +A G W + K +PD + + E A+ RRKG +E+ +F
Sbjct: 101 SIAYQSAM-GAPYEWVAEVNKYALRPDLAIYLDIPPEVAIDRRKGLPSRFPEFEEREFLE 159
Query: 178 KVAENYEKL-KDNIWIDIDADKDIDTL 203
KV + Y+++ + + +++DA + + T+
Sbjct: 160 KVRQYYKRMVSEGLLVEVDATRKLQTV 186
>gi|456863485|gb|EMF81952.1| dTMP kinase [Leptospira weilii serovar Topaz str. LT2116]
Length = 205
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKK 62
+I + F VFEG D SGK+T K L + L ++ IPS VNF + T + TG + ++LR +
Sbjct: 2 KIEKPIFAVFEGIDGSGKSTLCKSLTERLTEHGIPS--VNFTEPTKLETGKYLRKFLRGE 59
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
IEL + F +R E + Q I SLE+ +N+ DRY +S
Sbjct: 60 IELGREEQINAFLNDREES-------LRQNIL-----PSLESGRNV----LLDRYMYSTA 103
Query: 123 AFSAAKEGMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTD 174
A+ + D+S +K L + PD + LN E L RRK G ER+E
Sbjct: 104 AYQSDD---DLSPEMILKKNLNRNFKIPDLLFYLDLNPVIALERLNRRKE-GKERFETLA 159
Query: 175 FQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
K+ Y+++ I ID +K D + L +I + I +
Sbjct: 160 QLEKIRSAYDRILPKETIRIDGEKGPDEIVLECLEIFLKNINR 202
>gi|396497712|ref|XP_003845042.1| hypothetical protein LEMA_P003500.1 [Leptosphaeria maculans JN3]
gi|312221623|emb|CBY01563.1| hypothetical protein LEMA_P003500.1 [Leptosphaeria maculans JN3]
Length = 106
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 46/104 (44%), Gaps = 28/104 (26%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDR----------------- 47
+PRG IVFEG DR+GK+TQ KLV L + + + FP
Sbjct: 1 MPRGRLIVFEGLDRAGKSTQCAKLVADLRNDGRVVRHLRFPGMFSLAFIVGWQRKVDVWD 60
Query: 48 -----------TISTGHIIDEYLRKKIELPDQAAHLLFSANRWE 80
T G +ID YL + E D HLLFSANRWE
Sbjct: 61 FHGKKRKKECITTRIGQMIDSYLSGQSEQEDHVIHLLFSANRWE 104
>gi|225026353|ref|ZP_03715545.1| hypothetical protein EUBHAL_00595 [Eubacterium hallii DSM 3353]
gi|224956363|gb|EEG37572.1| dTMP kinase [Eubacterium hallii DSM 3353]
Length = 209
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 36/226 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FIV EG D SGKTTQ L +YL + P G +I E +R+ I P
Sbjct: 2 KGLFIVMEGPDGSGKTTQINLLKEYLEEAGYECLITREPG-----GTVIGEEIRQLILNP 56
Query: 67 DQ------AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ LL++A+R + + E++ +LE K + +DR+ S
Sbjct: 57 EHKEMSPVTEMLLYAASRAQ------------LVHEVIGPALEEGKIV----ISDRFVDS 100
Query: 121 GVAFS--AAKEGMD-ISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGD-ERYEQ--T 173
+ + A K G+ +S P G+ +PD + L+E E L+R+K + +R EQ
Sbjct: 101 SIVYQGIARKLGISTVSAVNAPGIGIYRPDGIFFIDLSEAEGLRRKKEQKNLDRMEQEGI 160
Query: 174 DFQRKVAENYEKLKDNI--WIDIDADKDIDTLGLIVKDIVIDTIKK 217
DF V+E Y K+ + ID + IDT+ +++ V + +KK
Sbjct: 161 DFHHMVSEGYRKVLSGRPEVMKIDGGRSIDTIQKKIRNHVDELLKK 206
>gi|358336611|dbj|GAA55082.1| thymidylate kinase, partial [Clonorchis sinensis]
Length = 98
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNK-NNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
RG FIVFEG ++ GK TQ++ L D L + + ++FPD++ G +I +Y ++L
Sbjct: 4 RGLFIVFEGTEKGGKKTQSQMLCDALTQITGKETLHIHFPDKSTPVGQLISQYQSGDLKL 63
Query: 66 PDQAAHLLFSANR 78
+ AHLL++ANR
Sbjct: 64 SHRVAHLLYTANR 76
>gi|162449104|ref|YP_001611471.1| thymidylate kinase [Sorangium cellulosum So ce56]
gi|161159686|emb|CAN90991.1| putative Thymidylate kinase [Sorangium cellulosum So ce56]
Length = 208
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Query: 11 IVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD--- 67
+VFEG D +G +TQA++ +L P G ++ + L +I LP
Sbjct: 1 MVFEGIDGAGTSTQAERFAAHLRAARRMVHVTREPSAG-PVGALLRQVLTHRISLPGARQ 59
Query: 68 -QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAF 124
+ LLFSA+R + H E E L G +DRY S +A+
Sbjct: 60 AEIMALLFSADRLD------------------HLGAEIEPLLRDGYVVISDRYDLSSLAY 101
Query: 125 SAAKEGMD-------ISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFG--DERYEQTD 174
+ G D + W + + +PD ++ + E A +RR+G G +E +E+T+
Sbjct: 102 QSTTAGEDGAGSGAIVEWIRELNRHALRPDVTVVIDVAPEIAEKRRRGRGGAEELFEKTE 161
Query: 175 FQRKVAENYEKLKDNI----WIDIDADKDID 201
Q ++AE Y + ++ + I ID + +D
Sbjct: 162 LQARLAEAYRRAEELVPGDRVIHIDGNGSVD 192
>gi|15606283|ref|NP_213662.1| thymidylate kinase [Aquifex aeolicus VF5]
gi|6016457|sp|O67099.1|KTHY_AQUAE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|158429380|pdb|2PBR|A Chain A, Crystal Structure Of Thymidylate Kinase (Aq_969) From
Aquifex Aeolicus Vf5
gi|158429381|pdb|2PBR|B Chain B, Crystal Structure Of Thymidylate Kinase (Aq_969) From
Aquifex Aeolicus Vf5
gi|2983484|gb|AAC07063.1| thymidylate kinase [Aquifex aeolicus VF5]
Length = 195
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 30/195 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
I FEG D SGKTTQAKKL +YL + P T G ++ E L + EL ++
Sbjct: 2 LIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREPGGT-KVGEVLREILLTE-ELDERT 59
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF A+R +KLIE+ I ++ D+ DR+ S +A+ +
Sbjct: 60 ELLLFEASR-------SKLIEEKIIPDLKR---------DKVVILDRFVLSTIAYQGYGK 103
Query: 130 GMDISWCFQ----PEKGLPKPDAVLLFKLNEE-ALQRRKGFGDERYEQTDFQRKVAENYE 184
G+D+ + +G+ KPD LL + + AL+R K R+E +F KV + +
Sbjct: 104 GLDVEFIKNLNEFATRGV-KPDITLLLDIPVDIALRRLK--EKNRFENKEFLEKVRKGFL 160
Query: 185 KL---KDNIWIDIDA 196
+L ++N+ + IDA
Sbjct: 161 ELAKEEENVVV-IDA 174
>gi|390960587|ref|YP_006424421.1| thymidylate kinase [Thermococcus sp. CL1]
gi|390518895|gb|AFL94627.1| thymidylate kinase [Thermococcus sp. CL1]
Length = 205
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 39/195 (20%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDY---------LNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
FIV EG D +GK+TQAK L ++ L K + F + + TG E +
Sbjct: 2 FIVIEGIDGAGKSTQAKLLAEWFEKKGHEVVLTKEPTDTAFGKLIRKLVLTGG--KEGII 59
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ +A LLF+A+R E L K SLE K +DRY +S
Sbjct: 60 DGARISHEAEALLFAADRAEHVAKLIK------------PSLEAGKI----VISDRYFYS 103
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQRRKGFGDERYEQTDF---- 175
+A+ A+ G+D+ W + +PD V+L L +E+++R G R +T+F
Sbjct: 104 SLAYQWAR-GLDLEWLIDLNRFAIRPDLVILLDLPVKESMKRING----RSIKTEFDKIA 158
Query: 176 --QRKVAENYEKLKD 188
Q++V ENY KL +
Sbjct: 159 ELQKRVRENYLKLAE 173
>gi|359727501|ref|ZP_09266197.1| thymidylate kinase [Leptospira weilii str. 2006001855]
gi|417779186|ref|ZP_12426978.1| dTMP kinase [Leptospira weilii str. 2006001853]
gi|410780521|gb|EKR65108.1| dTMP kinase [Leptospira weilii str. 2006001853]
Length = 205
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 31/223 (13%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKK 62
+I + F VFEG D SGK+T K L + L ++ IPS VNF + T TG + ++LR +
Sbjct: 2 KIEKPIFAVFEGIDGSGKSTLCKSLTERLTEHGIPS--VNFTEPTNFETGKYLRKFLRGE 59
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
IEL + F +R E + Q I SLE+ +N+ DRY +S
Sbjct: 60 IELGREEQINAFLNDREES-------LRQNIL-----PSLESGRNV----LLDRYMYSTA 103
Query: 123 AFSAAKEGMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTD 174
A+ + + + S EK L + PD + LN E L RRK G ER+E
Sbjct: 104 AYQSDDDLLPESII---EKNLNRNFRIPDLLFYLDLNPVIALERLNRRKE-GKERFETLA 159
Query: 175 FQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
K+ Y+++ I ID +K D + L +I + I +
Sbjct: 160 QLEKIRSAYDRILPKETIRIDGEKGPDEIVLECLEIFLKNINR 202
>gi|212223342|ref|YP_002306578.1| thymidylate kinase [Thermococcus onnurineus NA1]
gi|229621846|sp|B6YSZ4.1|KTHY_THEON RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|212008299|gb|ACJ15681.1| thymidylate kinase [Thermococcus onnurineus NA1]
Length = 205
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 91/199 (45%), Gaps = 45/199 (22%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDY---------LNKNNIPSQFVNFPDRTISTG---HIIDE 57
FIV EG D +GK+TQA+ L ++ L K + F R + TG IID
Sbjct: 2 FIVIEGIDGAGKSTQARLLAEWFKKKGYDVVLTKEPTDTAFGKLIRRLVLTGGKEGIID- 60
Query: 58 YLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
+ +A LLF+A+R E L K SL+ K +DRY
Sbjct: 61 ----GARISHEAEALLFAADRAEHVHKLIK------------PSLKTGKI----VISDRY 100
Query: 118 SFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQRRKGFGDERYEQTDF- 175
+S +A+ A+ G+D+ W + +PD V+L L +E+++R G R +T+F
Sbjct: 101 FYSSLAYQWAR-GLDLEWLIDLNRFAVRPDLVILLDLPVKESMKRING----RSIKTEFD 155
Query: 176 -----QRKVAENYEKLKDN 189
Q+KV ENY KL +
Sbjct: 156 KIAELQKKVRENYLKLAER 174
>gi|256810617|ref|YP_003127986.1| thymidylate kinase [Methanocaldococcus fervens AG86]
gi|256793817|gb|ACV24486.1| thymidylate kinase [Methanocaldococcus fervens AG86]
Length = 186
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 83/178 (46%), Gaps = 28/178 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D SGKTTQ+K L + + F + G I E L I++ D+
Sbjct: 2 FIVFEGIDGSGKTTQSKLLAEKIK------AFWTYEPSNSDVGKFIREILSGNIKVDDKT 55
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R E H+ L EK ++ DRY +S +A+ +
Sbjct: 56 LALLFAADRVE------------------HTKLIKEKLKEKDVVCDRYLYSSIAYQSV-A 96
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
G+D + K KPD V L ++ E AL+R K + +E+ DF KV + Y +L
Sbjct: 97 GVDEDFINSINKYALKPDIVFLLIVDIEVALKRVK--TKDIFEKKDFLMKVQDKYLEL 152
>gi|242398141|ref|YP_002993565.1| probable thymidylate kinase [Thermococcus sibiricus MM 739]
gi|259494284|sp|C6A0S1.1|KTHY_THESM RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|242264534|gb|ACS89216.1| probable thymidylate kinase [Thermococcus sibiricus MM 739]
Length = 210
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 31/193 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDY---------LNKNNIPSQFVNFPDRTISTGHIIDEY 58
G FIV EG D +GK+TQAK L + L K + F R + G E
Sbjct: 2 GIFIVLEGIDGAGKSTQAKMLAKWFENRGYEVVLTKEPTDTAFGKLIRRLVLIGG--KEG 59
Query: 59 LRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
+ + +A LLF+A+R E + KLIE I + +DRY
Sbjct: 60 IIDGARISKEAEALLFAADRAEH---VKKLIEPSI-------------KAGKVVISDRYF 103
Query: 119 FSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQRRKG--FGDERYEQTDF 175
+S +A+ A+ G+D++W P+ D V+L L +E++ R G E + +
Sbjct: 104 YSSLAYQWAR-GLDLNWLINLNAFAPRADLVILLDLPVKESINRINGRSIRSEFDKIVEL 162
Query: 176 QRKVAENYEKLKD 188
Q+KV +NY KL +
Sbjct: 163 QKKVRKNYLKLAE 175
>gi|407005356|gb|EKE21494.1| dTMP kinase [uncultured bacterium]
Length = 200
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ +G FIVFEG D SG++TQ L YL I + P + G +I L K+ +
Sbjct: 1 MEKGKFIVFEGLDGSGQSTQISLLEKYLKDKGIKFHTTSEPSGNL-LGGLIRAILTKQWK 59
Query: 65 LPDQAAHLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
L + LL++A+R E + +E+G + RY FS A
Sbjct: 60 LSNTGIQLLYAADRAHHLESEVWPAMEKG-----------------NHVISSRYFFSTFA 102
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR---KGFGDERYEQTDFQRKVA 180
F + D++W + + PKPD V +++ + RR F E +E+ +KV
Sbjct: 103 FGSLDN--DLAWLEKINEKFPKPDLVFFIRVSPKECIRRIESSRFRKEFFEEEAKLKKVL 160
Query: 181 ENYEKL----KDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
Y+K+ K + ID ++ ++ + + I+ IK
Sbjct: 161 SVYDKISKSKKYKNFYTIDGERSVEEIFAEISKIIDKYIK 200
>gi|408794451|ref|ZP_11206056.1| dTMP kinase [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461686|gb|EKJ85416.1| dTMP kinase [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 201
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 22/207 (10%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
F VFEG D SGKTT ++ + + L +IP+ + P ++ G I E+L+ K++L +
Sbjct: 7 FFVFEGIDGSGKTTVSRMVSEALLTKSIPNLWHREPTDSVH-GKKIREFLQGKLKLTKEE 65
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
F A+R + E++ +L++ K++ Q DRY FS A+ E
Sbjct: 66 QIETFIADR------------ECSVNEVILPTLKSGKSIVQ----DRYYFSTAAYQGRDE 109
Query: 130 GMDISWCFQPE-KGLPKPDAVLLFKLN-EEALQRR--KGFGDERYEQTDFQRKVAENYEK 185
++ E +G P+P+ V L+ EEA +RR +G +E ++ Q ++ +NY
Sbjct: 110 EHAADILYKNEDRGFPEPNRVYFLDLSPEEAQERRTSRGGKEEVFDVDSEQARIYQNYLA 169
Query: 186 LKDNIWIDIDADKDI-DTLGLIVKDIV 211
+ I +DA ++ + + V+DI+
Sbjct: 170 ILPESTIFVDATAELEEVVAFCVEDIL 196
>gi|284161466|ref|YP_003400089.1| thymidylate kinase [Archaeoglobus profundus DSM 5631]
gi|284011463|gb|ADB57416.1| thymidylate kinase [Archaeoglobus profundus DSM 5631]
Length = 199
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST-GHIIDEYLRKKIELPDQ 68
I EG D SGKTT + LV+ L K V F + T S G I + L+++ P++
Sbjct: 2 LIAVEGIDGSGKTTIVRFLVEELKKRG--YDVVAFKEPTDSEYGKKIRQILKERKISPEE 59
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
L + + ++ G + DRY +S +A+ A
Sbjct: 60 ELKLFIKDREFNVRNNILPALKSG-----------------KVVIMDRYYYSTIAYQGAL 102
Query: 129 EGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKG-FGDERYEQTDFQRKVAENYEKL 186
G+DI + PKPD V++ ++ E AL+R K +R+E ++ RKV + L
Sbjct: 103 -GLDIGKIKTLNEQFPKPDLVIILDVSPETALKRIKAKRKPDRFEDLEYLRKVRNIFLSL 161
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKS 218
K+NI + IDA++DI+ + V +V++ ++KS
Sbjct: 162 KNNIVV-IDAERDIEEVKRDVLKVVLEHLEKS 192
>gi|320100889|ref|YP_004176481.1| thymidylate kinase [Desulfurococcus mucosus DSM 2162]
gi|319753241|gb|ADV64999.1| thymidylate kinase [Desulfurococcus mucosus DSM 2162]
Length = 204
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 26/218 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FIV EG D +GKTT A +LV+ L P+ + P + + Y +
Sbjct: 4 KGYFIVLEGLDGAGKTTVAHRLVEELESRGFPAIYTYEPTDSEIVKAVKSIYSDLRDAYI 63
Query: 67 DQAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D L F+ +R +L K IE+G+T+ +DRY +S VA+
Sbjct: 64 DA---LAFALDRLIHVKSLVKPFIEKGVTV-----------------VSDRYFYSSVAYQ 103
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER---YEQTDFQRKVAEN 182
+A G W + K KPD + ++ E RK R YE+ +F +V E
Sbjct: 104 SAS-GAPFDWILEVNKYALKPDVAIYLDVDPEEGLSRKTTSTSRFPEYEKKEFLHRVREA 162
Query: 183 YEKLKD-NIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
Y ++ + + +DA + + + V IV I +
Sbjct: 163 YVRMVEIGLLTRVDASRPLGEVYAEVWSIVQGVIGRGH 200
>gi|332030829|gb|EGI70473.1| Thymidylate kinase [Acromyrmex echinatior]
Length = 143
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 75/194 (38%), Gaps = 85/194 (43%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RGA IV EGCDR+ DR G I++ +L K+I +P
Sbjct: 4 RGALIVLEGCDRT--------------------------DRKTPVGTILNSFLSKEINVP 37
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+AAHLLFSANRWE + + K ++ SS N ++ C +
Sbjct: 38 LEAAHLLFSANRWECKEDMEKTLQ---------SSTRCPNNNNKNC----------MVTE 78
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQR-KVAENYEK 185
K+G+ + T+F R + NYEK
Sbjct: 79 GKKGLSM---------------------------------------TNFNRVSIESNYEK 99
Query: 186 LKDNIWIDIDADKD 199
L+D+ W+ I+A++D
Sbjct: 100 LRDDTWVIINANQD 113
>gi|251771718|gb|EES52293.1| Thymidylate kinase [Leptospirillum ferrodiazotrophum]
Length = 252
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 28/216 (12%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G IVFEG D SGK+TQA++L L+ + P+ P T + + + L + L
Sbjct: 39 GCLIVFEGMDGSGKSTQARRLKARLDGLSHPAVLTKEPGGTPAGARLREILLDPALPLAP 98
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+A LF A+R TL L E + +DR SF+ VA+ +
Sbjct: 99 EAELFLFEADRAMHVKTL----------------LLPELRAGRTVLSDRLSFATVAYQSF 142
Query: 128 KEGMD---ISWCFQPEKGLPKPDAVLLFKLNEEALQRR---KGFGDERYE--QTDFQRKV 179
G+ +S + G PD L L + RR +G G R+E D+ +V
Sbjct: 143 GGGLSRELVSTLNEVALGGVVPDVTYLLDLPVSEMARRLRERGDGPTRFELLGGDYFERV 202
Query: 180 AENY---EKLKDNIWIDIDADKDIDTL-GLIVKDIV 211
E Y ++ + +DA +D +TL G I +D+
Sbjct: 203 REGYLELARIHRGRTVVLDATRDPETLEGEIFEDLA 238
>gi|113195351|ref|YP_717481.1| thymidylate kinase [Taterapox virus]
gi|90660627|gb|ABD97740.1| thymidylate kinase [Taterapox virus]
Length = 58
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+ RGA IVFEG D+SGKTTQ +++ ++ N I +++NFP R+ TG +ID+YL +K
Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESISANTI--KYLNFPQRSTVTGKMIDDYLTRK 56
>gi|312136656|ref|YP_004003993.1| thymidylate kinase [Methanothermus fervidus DSM 2088]
gi|311224375|gb|ADP77231.1| thymidylate kinase [Methanothermus fervidus DSM 2088]
Length = 196
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
+I FEG D SGKTT K + YL +N V FP G + + L+ +I+ + A
Sbjct: 2 YIAFEGIDGSGKTTICKYISSYLRRNGYKVLTVGFPSNN-EIGKLAKKMLKGEIKWNEIA 60
Query: 70 AHLLFSANRWEREPTLTKLIEQ-GITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
LL +A+ + + K ++ GI L +DR +S +A+
Sbjct: 61 FELLITADMLQCNHKIKKFLKNGGIVL------------------SDRSPYSSIAYRPHL 102
Query: 129 EGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENYEKLK 187
+W + K L KPD V+ ++ + AL+R + ++YE+ + Y +L
Sbjct: 103 R----NWIEKIHKPLIKPDIVIFLDVSVDNALKR--IYKHDKYEKKKYLEIARRTYLRLS 156
Query: 188 DNI-WIDIDADKDIDTLGLIVKDIVIDTIKKSQFS 221
+ ++ I+A+K+ + L VK I+ ++K + S
Sbjct: 157 KELNFVKINANKNFKKVFLDVKHIIESSVKNKRLS 191
>gi|410657465|ref|YP_006909836.1| Thymidylate kinase [Dehalobacter sp. DCA]
gi|410660502|ref|YP_006912873.1| Thymidylate kinase [Dehalobacter sp. CF]
gi|409019820|gb|AFV01851.1| Thymidylate kinase [Dehalobacter sp. DCA]
gi|409022858|gb|AFV04888.1| Thymidylate kinase [Dehalobacter sp. CF]
Length = 206
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 37/218 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNK-NNIPSQFVNFPDRTISTGHIIDEYLRKKIE- 64
+G FIV EG D SGK TQ ++L YL + + P + G I + L +I
Sbjct: 4 KGKFIVLEGIDGSGKGTQIERLKVYLETVRGVKTVLTREPSQG-PLGTTIRQVLSGRING 62
Query: 65 LPDQAAHLLFSANRWEREPTLT-KLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+ D LLF+A+R + L +EQG DRY +S A
Sbjct: 63 VNDNCLALLFAADRLDHNNNLVIPALEQG-----------------NYVICDRYLWSSFA 105
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKG---FGDERYEQTDFQRKVA 180
+ K D SW + + KPD L K++ E +R F E +E ++ R VA
Sbjct: 106 YQGMKN--DESWIGEINQYAVKPDLTLFIKVSPETSLKRIAAGRFQTEIFENSEMLRHVA 163
Query: 181 ENYEKLKDNIW-------IDIDADKDIDTLGLIVKDIV 211
+NY+KL W ++I+ +K+ + L+ +DIV
Sbjct: 164 DNYQKLYKQ-WQKNGEPVVEINGEKEPE---LVQQDIV 197
>gi|386359888|ref|YP_006058133.1| thymidylate kinase [Thermus thermophilus JL-18]
gi|383508915|gb|AFH38347.1| thymidylate kinase [Thermus thermophilus JL-18]
Length = 198
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 80/185 (43%), Gaps = 28/185 (15%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G F+ EG D SGKTTQA++L +L P P + + L + EL
Sbjct: 3 GLFLTLEGLDGSGKTTQARRLAAFLEAQGHPVLLTREPGGGLPE---VRSLLLTR-ELSP 58
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+A +LLFSA+R E + K+I G+ Q +DRY S +A+
Sbjct: 59 EAEYLLFSADRAEH---VRKVILPGLA-------------AGQVVISDRYLDSSLAYQGY 102
Query: 128 KEGMDISW----CFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ--TDFQRKVAE 181
G+ + W + +GL KP L L EA RR D R E+ +F R+V E
Sbjct: 103 GRGLPLPWLQEVAREATRGL-KPQLTFLLDLPPEAALRRVRRPD-RLERLGLEFFRRVRE 160
Query: 182 NYEKL 186
Y L
Sbjct: 161 GYLAL 165
>gi|414154338|ref|ZP_11410657.1| Thymidylate kinase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454129|emb|CCO08561.1| Thymidylate kinase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 207
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL--RKKIELPD 67
FIVFEG D SGKTTQ L YL++ NIP+ P T G I E L R+ E+ +
Sbjct: 5 FIVFEGVDGSGKTTQLNLLNKYLSEQNIPTVMTREPGGT-PVGEKIRELLLDRRFAEMQE 63
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+A LL++A R + + +++ L K + DRY S +A+
Sbjct: 64 RAEALLYAAARAQ------------LVAQVIRPGLAAGKVV----LCDRYLDSSLAYQGY 107
Query: 128 KEGMDISWCF---QPEKGLPKPDAVLLFKL-NEEALQR-RKGFGDERYEQTD--FQRKVA 180
GMD ++ + G +PD +L + E LQR R+ +R E F ++V
Sbjct: 108 GRGMDTAFLAGINELATGGLRPDLTVLLDIPPREGLQRSRQDRPADRLESESLAFYQRVR 167
Query: 181 ENYEKLKDN---IWIDIDADKDIDTL 203
Y L ++ +DA + + L
Sbjct: 168 SGYLALARQNPAAYLVLDARQPVQQL 193
>gi|305663476|ref|YP_003859764.1| thymidylate kinase [Ignisphaera aggregans DSM 17230]
gi|304378045|gb|ADM27884.1| thymidylate kinase [Ignisphaera aggregans DSM 17230]
Length = 203
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQF------VNFPDRTISTGHIIDEYLRK 61
G FIV EG D +GKTT AK L+D L +N + + F + S G D Y+
Sbjct: 7 GLFIVLEGIDGAGKTTIAKMLLDDLERNGYRTIYTFEPWTTRFVEDLKSLGMRRDAYIDA 66
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
I D+ H+ + + I G + DRY +S
Sbjct: 67 LIYAADRLVHV---------KEVIEPAIRDGYIV-----------------VCDRYFYSS 100
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGDE--RYEQTDFQRK 178
VA+ +A G+ + W KPD + + E + R++G+ YE+ RK
Sbjct: 101 VAYQSAM-GVPMDWIITLNMFALKPDLAIYLDVEPEIGIARKRGYKSRFPEYEEYGILRK 159
Query: 179 VAENY-EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKS 218
E Y E ++ N+ + I A +DI + V++IV I++S
Sbjct: 160 AREIYLEMVRRNMLVYIYAGRDIGDVYRDVRNIVYRAIEQS 200
>gi|389852999|ref|YP_006355233.1| thymidylate kinase [Pyrococcus sp. ST04]
gi|388250305|gb|AFK23158.1| thymidylate kinase [Pyrococcus sp. ST04]
Length = 203
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 38/195 (19%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDY---------LNKNNIPSQFVNFPDRTISTGHIIDEY 58
G FIVFEG D SGK+TQAK L ++ L K S + I G IID
Sbjct: 3 GIFIVFEGIDGSGKSTQAKLLAEWFEERGYEVVLTKEPTDSDLGKIIRKLIVEGGIID-- 60
Query: 59 LRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDR 116
++ +A LLF+A+R E H E L +G DR
Sbjct: 61 -GSRVSYETEA--LLFAADRAE------------------HVKRVIEPALQEGKVVICDR 99
Query: 117 YSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQRRK--GFGDERYEQT 173
Y +S +A+ A+ G+ + W + + +P+ +L L +E+++R K G E +
Sbjct: 100 YFYSSLAYQWAR-GLSLEWLIKINEFAIRPNLAILLDLPTKESIRRIKVRGGATEFDKLV 158
Query: 174 DFQRKVAENYEKLKD 188
+ Q++V +NY KL +
Sbjct: 159 ELQKRVRQNYLKLAE 173
>gi|215275163|sp|P0C8G1.1|KTHY_ASFP4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
Length = 239
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG I EG +R GK+TQA +L L + + + FP+ +TG +I + L K IE+
Sbjct: 2 RGILIAIEGVNRVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGDLILQVLNKMIEMS 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ H LF+ + E + L++ + + DRY +SG+A++
Sbjct: 62 SEQLHKLFTKHCSEFVAEIAALLKLNFIVIV-----------------DRYIWSGLAYAQ 104
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFK----LNEEALQRRKGFGDERYEQTDF 175
A +G+ I K + KPD LNE+ L ++ F + ++T F
Sbjct: 105 A-DGITIE-----TKNIFKPDYTFFLSSKKPLNEKPLTLQRLFETKEKQETIF 151
>gi|313887553|ref|ZP_07821236.1| dTMP kinase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846431|gb|EFR33809.1| dTMP kinase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 202
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 90/203 (44%), Gaps = 29/203 (14%)
Query: 9 AFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI-ELPD 67
AFI FEG D SGK+T + D L KNNI + P T + I D L K + E+
Sbjct: 3 AFITFEGPDGSGKSTICNLVYDELIKNNIKTIKTREPGGTRISEKIRDIILDKDLKEMDM 62
Query: 68 QAAHLLFSANRWEREPTLTKLI---EQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ LL+SA+R + T K+I E G+T+ +RY S +A+
Sbjct: 63 RTEALLYSASRAQH--TYEKIIPALEDGVTV-----------------LCERYVLSSLAY 103
Query: 125 SAAKEGM---DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERY--EQTDFQRKV 179
G DI G KPD V +F+ N L R+ +R E DF +KV
Sbjct: 104 QGHARGQKLEDIRAINDFATGGKKPDIVFIFRTNNSTLTRKDQACYDRLECEGDDFHKKV 163
Query: 180 AENYEKL-KDNIWIDIDADKDID 201
+ Y L K+ + ID ++ I+
Sbjct: 164 RDYYNNLEKEENYYFIDVNQTIE 186
>gi|160945247|ref|ZP_02092473.1| hypothetical protein FAEPRAM212_02766 [Faecalibacterium prausnitzii
M21/2]
gi|158442978|gb|EDP19983.1| dTMP kinase [Faecalibacterium prausnitzii M21/2]
gi|295105536|emb|CBL03080.1| thymidylate kinase [Faecalibacterium prausnitzii SL3/3]
Length = 223
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 34/181 (18%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ +G IV EG D SGK TQAK L ++L +P Q + FPD + ++ YL +
Sbjct: 1 MSKGKLIVLEGLDGSGKATQAKLLAEHLAAQGVPVQKITFPDYASDSSALVKMYLAGQFG 60
Query: 64 ELPD----QAAHLLFSANRWEREPT-LTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
+ PD AA ++ +R+ T EQG + DRY+
Sbjct: 61 QHPDDVNAYAASSFYAVDRYASYKTSWGSFYEQGGVI-----------------IADRYT 103
Query: 119 FSGVAFSAAKEGMD-----ISWCFQPE---KGLPKPDAVLLFKLNEEALQR---RKGFGD 167
S +K + + W F E GLP PD V+ +++ QR ++ GD
Sbjct: 104 TSNAVHQCSKLPQEQWEEYLHWLFDYEFRLLGLPAPDRVIYLQVDPAVSQRLMTQRYHGD 163
Query: 168 E 168
E
Sbjct: 164 E 164
>gi|261403129|ref|YP_003247353.1| thymidylate kinase [Methanocaldococcus vulcanius M7]
gi|261370122|gb|ACX72871.1| thymidylate kinase [Methanocaldococcus vulcanius M7]
Length = 187
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 26/174 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D SGKTT +KKL +N F + G +I + L +++ D+
Sbjct: 2 FIVFEGIDGSGKTTISKKLAKSIN------AFWTYEPSNSVVGELIRKILSGNVKVDDKT 55
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLFSA+R E + E + D C DRY +S +A+ +
Sbjct: 56 LALLFSADRIEHNKKIK----------------EELRYRDVVC--DRYLYSSIAYQSV-A 96
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENY 183
G+D + + KPD V L + E +R D +E+ +F KV E Y
Sbjct: 97 GVDEDFIRSINRYALKPDLVFLLICDIETALKRINTKD-IFEKKEFLEKVQEKY 149
>gi|456877722|gb|EMF92731.1| dTMP kinase [Leptospira santarosai str. ST188]
Length = 202
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKK 62
+I + F VFEG D SGK+T K L D LN+ IPS VNF + T TG + ++L+ +
Sbjct: 2 KIEKPIFAVFEGIDGSGKSTLCKSLTDRLNERGIPS--VNFTEPTNFETGKYLRKFLKGE 59
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
I+L + F +R E LI+ + SL++ KN+ DRY +S
Sbjct: 60 IDLEREEQIDAFLNDREE------SLIQN------ILPSLKSGKNV----LLDRYMYSTA 103
Query: 123 AFSAAKEGMDISWCFQPEKGLPK--------PDAVLLFKLNE----EALQRRKGFGDERY 170
A+ + + F PE + K PD + LN E L RRK ER+
Sbjct: 104 AYQSGDD-------FLPETIIEKNLERNFKIPDLLFYLDLNPAIALERLNRRKE-NKERF 155
Query: 171 EQTDFQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
E + K+ Y+++ I ID +K D + +I + +K
Sbjct: 156 ETSIQLEKIRSAYDRILPKGTIRIDGEKGPDQIVFECLEIFLKKLK 201
>gi|291296874|ref|YP_003508272.1| thymidylate kinase [Meiothermus ruber DSM 1279]
gi|290471833|gb|ADD29252.1| thymidylate kinase [Meiothermus ruber DSM 1279]
Length = 205
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 24/204 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FI FEG + +GK+TQA+ L ++L P T G I L + +
Sbjct: 2 KGLFITFEGPEGAGKSTQARLLAEWLRAKGREVVLTREPGGT-RLGQAIRGLLLHQDPMC 60
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+A +LL+SA+R E M ++ L DR+ S +A+
Sbjct: 61 AEAEYLLYSADRAEH----------------MQRVIQPALGLGHIVLCDRWLDSSLAYQG 104
Query: 127 AKEGMDISWCFQPEKGLP---KPDAVLLFKLNEE-ALQRRKGFGDERYEQTDFQRKVAEN 182
G+D+ W +G +P LF L E L+R +G E +F R+V +
Sbjct: 105 YGRGLDLGWLRAVAQGATQGIRPHKTFLFDLPPEVGLERFEGRDRLEREPLEFHRRVRQG 164
Query: 183 YEKL---KDNIWIDIDADKDIDTL 203
Y +L + ++ +DA + ++ L
Sbjct: 165 YLELAQAEPERFVLLDATQPLEAL 188
>gi|381180544|ref|ZP_09889383.1| thymidylate kinase [Treponema saccharophilum DSM 2985]
gi|380767532|gb|EIC01532.1| thymidylate kinase [Treponema saccharophilum DSM 2985]
Length = 212
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS---TGHIIDEYLRKKIELP 66
FIVFEG D +G +TQ + L+ N P FP + TG + L + L
Sbjct: 8 FIVFEGIDGAGTSTQIEMLM------NSPHARKFFPTAEPTNGETGRFLRRMLGGEFRLD 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ A LF+A+R E G + + +E + +DRY FS +A+ +
Sbjct: 62 PRTAAYLFAADRCEH--------LWGTGGDDFNGGIERICAGGKIVVSDRYLFSSIAYQS 113
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYEQTDFQRKVAENYE 184
G +++ Q P P+ + FK+ E +L R G G E YE+ +F RK E YE
Sbjct: 114 VTCGGELAKMLQAP--FPLPELLFFFKIAPEVSLSRIGGRGKREIYEEVEFLRKTEERYE 171
Query: 185 K 185
+
Sbjct: 172 R 172
>gi|421110526|ref|ZP_15571021.1| dTMP kinase [Leptospira santarosai str. JET]
gi|410804122|gb|EKS10245.1| dTMP kinase [Leptospira santarosai str. JET]
Length = 202
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKK 62
+I + F VFEG D SGK+T K L D LN+ IPS VNF + T TG + ++L+ +
Sbjct: 2 KIEKPIFAVFEGIDGSGKSTLCKSLTDRLNERGIPS--VNFTEPTNFETGKYLRKFLKGE 59
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
I+L + F +R E LI+ + SL++ KN+ DRY +S
Sbjct: 60 IDLGREEQIDAFLNDREE------SLIQN------ILPSLKSGKNV----LLDRYMYSTA 103
Query: 123 AFSAAKEGMDISWCFQPEKGLPK--------PDAVLLFKLNE----EALQRRKGFGDERY 170
A+ + + F PE + K PD + LN E L RRK ER+
Sbjct: 104 AYQSGDD-------FLPETIIEKNLERNFKIPDLLFYLDLNPAIALERLNRRKE-NKERF 155
Query: 171 EQTDFQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
E + K+ Y+++ I ID +K D + +I + +K
Sbjct: 156 ETSIQLEKIRSAYDRILPKGTIRIDGEKGPDQIVFECLEIFLKKLK 201
>gi|328948690|ref|YP_004366027.1| thymidylate kinase [Treponema succinifaciens DSM 2489]
gi|328449014|gb|AEB14730.1| Thymidylate kinase [Treponema succinifaciens DSM 2489]
Length = 214
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D +G TTQ + L K+ P + TG + + L+ +I++ ++
Sbjct: 6 FIVFEGIDGAGTTTQLEIL-----KSRTPEFLFTAEPTSSETGKFLRKMLKGEIQVTNET 60
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
A +F+A+R E +IE+ + + S+ E K + +DRY FS +A+ +
Sbjct: 61 AAYIFAADRNEH-INGNCIIEENKLITGIKSACEKGKIV----VSDRYLFSSLAYQSIDC 115
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYEQTDFQRKVAENYEKL 186
+I K P P + F + E +L+R G E YE+ DF ++ E YEK+
Sbjct: 116 SPEIPRTLN--KFFPLPRLLFFFDIEPEISLKRISSRGQKEIYEKIDFLKRTKEEYEKV 172
>gi|148241353|ref|YP_001226510.1| thymidylate kinase [Synechococcus sp. RCC307]
gi|166223123|sp|A5GQJ8.1|KTHY_SYNR3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|147849663|emb|CAK27157.1| Thymidylate kinase [Synechococcus sp. RCC307]
Length = 212
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 32/225 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG F+V EG D GKTTQ K L D+L + + G + + LR+ + P
Sbjct: 2 RGRFLVLEGIDGCGKTTQLKALADWLPASGLMPSGAQLITTREPGGTALGQALRQLLLHP 61
Query: 67 DQ-------AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
+ A LL++A+R + + + LE +DRY
Sbjct: 62 PEEQAPATRAELLLYAADRAQH----------------VQTRLEPALAAGDWVLSDRYCG 105
Query: 120 SGVAFSAAKEGMDISWCFQPEK----GLPKPDAVLLFKLNEE-ALQRRKGFGDERYEQTD 174
S A+ G+D+ Q E+ GL +PD L +L+ E A QRR G +R E
Sbjct: 106 STAAYQGYGRGLDLDLITQLEQLATAGL-QPDLCLWLELSPELAAQRRSGQQQDRIEAEG 164
Query: 175 --FQRKVAENYEKLKDN-IWIDIDADKDIDTLGLIVKDIVIDTIK 216
F +V + + +L +W +DA + + V+ +V + ++
Sbjct: 165 LAFLARVHQGFAELSQRPLWRRVDASLPPEQVHQQVQHLVREGLE 209
>gi|84489171|ref|YP_447403.1| thymidylate kinase [Methanosphaera stadtmanae DSM 3091]
gi|121696579|sp|Q2NHE3.1|KTHY_METST RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|84372490|gb|ABC56760.1| putative thymidylate kinase [Methanosphaera stadtmanae DSM 3091]
Length = 195
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 24/181 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD-- 67
+IV EG D GKTTQ +KL ++L K + + P + G II E L K D
Sbjct: 2 YIVLEGIDGVGKTTQTEKLKEWLEKRGFSVKTIVEPTDS-DIGKIIREELLKPEATSDTN 60
Query: 68 -QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
Q LLF+A+R +TL+ + ++N N + +DR +S + +
Sbjct: 61 QQMLALLFAADR--------------LTLKDEINQVKN--NQQKILISDRSFYSSITYQN 104
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQTDFQRKVAENYEK 185
+ ++ W ++ K P+PD ++ ++E EAL+R + +E +F K ENY K
Sbjct: 105 ST-TIEPEWIYKINKHTPRPDLTIILDIDEDEALKRCDKI--DTFENKEFLEKTRENYLK 161
Query: 186 L 186
L
Sbjct: 162 L 162
>gi|456824700|gb|EMF73126.1| dTMP kinase [Leptospira interrogans serovar Canicola str. LT1962]
Length = 204
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 29/215 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
F+VFEG D SGK+T K L + L + IPS P + TG + ++LR +IEL +
Sbjct: 8 FVVFEGIDGSGKSTLCKSLTEKLIELGIPSAAFTEPT-NLETGKYLRKFLRGEIELGKEE 66
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
F +R E ++Q I + N D+ DRY +S A+ +
Sbjct: 67 QIEAFLNDREES-------LKQNILPAL---------NSDKNALLDRYMYSTAAYQS--- 107
Query: 130 GMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTDFQRKVAE 181
G D+S +K L + PD + L+ E L RRK G ER+E K+
Sbjct: 108 GDDLSPEMILKKNLNRNFKIPDLLFYLDLSPSIALERLNRRKE-GKERFETLAQLEKIRS 166
Query: 182 NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
YEK+ I ID +K+ + + +I + IK
Sbjct: 167 AYEKVLPKDTIRIDGNKNQNQIVQECLEIFLTNIK 201
>gi|134297938|ref|YP_001111434.1| dTMP kinase [Desulfotomaculum reducens MI-1]
gi|172044205|sp|A4J0K6.1|KTHY_DESRM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|134050638|gb|ABO48609.1| thymidylate kinase [Desulfotomaculum reducens MI-1]
Length = 207
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 92/208 (44%), Gaps = 33/208 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK--IELPD 67
FIVFEG D SGK+TQ L YL++ I + P T G I E L E+ D
Sbjct: 5 FIVFEGVDGSGKSTQLNLLNKYLSQKEIKTICTREPGGT-PVGEKIRELLLDPNFAEIQD 63
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRYSFSGVAFS 125
+ LL+SA R +L+ Q I L+QG DRY S +A+
Sbjct: 64 RTEALLYSAAR-------AQLVAQVI-----------RPQLEQGTVVLCDRYIDSTLAYQ 105
Query: 126 AAKEGMDISWCFQPEK---GLPKPDAVLLFKL-NEEALQR-RKGFGDERY--EQTDFQRK 178
GMDIS+ Q + G P+ +L L EE LQR RK +R E F K
Sbjct: 106 GYGRGMDISFLAQINELASGGLMPNITILLDLPPEEGLQRSRKDRPADRLENESLTFYHK 165
Query: 179 VAENY---EKLKDNIWIDIDADKDIDTL 203
V Y K K + ++ +DA + ++ L
Sbjct: 166 VRSGYLEMAKRKPDTYLVLDARQTMEQL 193
>gi|45658645|ref|YP_002731.1| thymidylate kinase [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|294827736|ref|NP_710987.2| thymidylate kinase [Leptospira interrogans serovar Lai str. 56601]
gi|386073133|ref|YP_005987450.1| thymidylate kinase [Leptospira interrogans serovar Lai str. IPAV]
gi|417770445|ref|ZP_12418353.1| dTMP kinase [Leptospira interrogans serovar Pomona str. Pomona]
gi|418680142|ref|ZP_13241394.1| dTMP kinase [Leptospira interrogans serovar Pomona str. Kennewicki
LC82-25]
gi|418690682|ref|ZP_13251790.1| dTMP kinase [Leptospira interrogans str. FPW2026]
gi|418701834|ref|ZP_13262752.1| dTMP kinase [Leptospira interrogans serovar Bataviae str. L1111]
gi|418702860|ref|ZP_13263752.1| dTMP kinase [Leptospira interrogans serovar Hebdomadis str. R499]
gi|418717751|ref|ZP_13277292.1| dTMP kinase [Leptospira interrogans str. UI 08452]
gi|418725254|ref|ZP_13283930.1| dTMP kinase [Leptospira interrogans str. UI 12621]
gi|421083708|ref|ZP_15544579.1| dTMP kinase [Leptospira santarosai str. HAI1594]
gi|421102116|ref|ZP_15562726.1| dTMP kinase [Leptospira interrogans serovar Icterohaemorrhagiae
str. Verdun LP]
gi|421117905|ref|ZP_15578259.1| dTMP kinase [Leptospira interrogans serovar Canicola str. Fiocruz
LV133]
gi|421121346|ref|ZP_15581643.1| dTMP kinase [Leptospira interrogans str. Brem 329]
gi|421125661|ref|ZP_15585906.1| dTMP kinase [Leptospira interrogans serovar Grippotyphosa str.
2006006986]
gi|421133522|ref|ZP_15593670.1| dTMP kinase [Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|59798325|sp|Q72NL9.1|KTHY_LEPIC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|73920823|sp|Q8F7Y6.2|KTHY_LEPIN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|45601889|gb|AAS71368.1| thymidylate kinase [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|293385579|gb|AAN48005.2| thymidylate kinase [Leptospira interrogans serovar Lai str. 56601]
gi|353456922|gb|AER01467.1| thymidylate kinase [Leptospira interrogans serovar Lai str. IPAV]
gi|400328150|gb|EJO80387.1| dTMP kinase [Leptospira interrogans serovar Pomona str. Kennewicki
LC82-25]
gi|400360182|gb|EJP16162.1| dTMP kinase [Leptospira interrogans str. FPW2026]
gi|409947586|gb|EKN97582.1| dTMP kinase [Leptospira interrogans serovar Pomona str. Pomona]
gi|409961636|gb|EKO25381.1| dTMP kinase [Leptospira interrogans str. UI 12621]
gi|410010582|gb|EKO68719.1| dTMP kinase [Leptospira interrogans serovar Canicola str. Fiocruz
LV133]
gi|410022530|gb|EKO89307.1| dTMP kinase [Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|410345780|gb|EKO96850.1| dTMP kinase [Leptospira interrogans str. Brem 329]
gi|410368261|gb|EKP23639.1| dTMP kinase [Leptospira interrogans serovar Icterohaemorrhagiae
str. Verdun LP]
gi|410433625|gb|EKP77965.1| dTMP kinase [Leptospira santarosai str. HAI1594]
gi|410436767|gb|EKP85878.1| dTMP kinase [Leptospira interrogans serovar Grippotyphosa str.
2006006986]
gi|410758966|gb|EKR25185.1| dTMP kinase [Leptospira interrogans serovar Bataviae str. L1111]
gi|410767404|gb|EKR38079.1| dTMP kinase [Leptospira interrogans serovar Hebdomadis str. R499]
gi|410786921|gb|EKR80657.1| dTMP kinase [Leptospira interrogans str. UI 08452]
gi|455670244|gb|EMF35269.1| dTMP kinase [Leptospira interrogans serovar Pomona str. Fox 32256]
gi|456982901|gb|EMG19356.1| dTMP kinase [Leptospira interrogans serovar Copenhageni str.
LT2050]
Length = 204
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 29/215 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
F+VFEG D SGK+T K L + L + IPS P + TG + ++LR +IEL +
Sbjct: 8 FVVFEGIDGSGKSTLCKSLTEKLIELGIPSAAFTEPT-NLETGKYLRKFLRGEIELGKEE 66
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
F +R E ++Q I + N D+ DRY +S A+ +
Sbjct: 67 QIEAFLNDREES-------LKQNILPAL---------NSDKNVLLDRYMYSTAAYQS--- 107
Query: 130 GMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTDFQRKVAE 181
G D+S +K L + PD + L+ E L RRK G ER+E K+
Sbjct: 108 GDDLSPEMILKKNLNRNFKIPDLLFYLDLSPSIALERLNRRKE-GKERFETLAQLEKIRS 166
Query: 182 NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
YEK+ I ID +K+ + + +I + IK
Sbjct: 167 AYEKILPKDTIRIDGNKNQNQIVQECLEIFLTNIK 201
>gi|170290822|ref|YP_001737638.1| dTMP kinase [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174902|gb|ACB07955.1| dTMP kinase [Candidatus Korarchaeum cryptofilum OPF8]
Length = 191
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 27/178 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
+ FEG D +GKTTQ+++L+D L + + + + P G I+ + L+ +IEL +
Sbjct: 2 LVAFEGIDGAGKTTQSRRLLDKLMELGMRAIYTKEPTDG-EIGKILKKALKGEIELDQRT 60
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R E +L +D DRY S +A+ A
Sbjct: 61 IALLFAADRIEHIRSL---------------------KVDGIIILDRYLLSSLAYQGA-- 97
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGDERYEQTDFQRKVAENYEKL 186
+ I W + + + PD V ++ + A+ R + E Y DF V ENY KL
Sbjct: 98 FLPIQWINELNRWVRLPDIVFYLDISPDVAISRIE--DKEIYHSLDFLSIVRENYLKL 153
>gi|427726146|ref|YP_007073423.1| thymidylate kinase [Leptolyngbya sp. PCC 7376]
gi|427357866|gb|AFY40589.1| Thymidylate kinase [Leptolyngbya sp. PCC 7376]
Length = 211
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 94/228 (41%), Gaps = 40/228 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D SG +TQA+ L + NI + P + G+++ E LRK+I +
Sbjct: 5 FIVFEGIDGSGSSTQAELLYQHFQAENIAAVLSPEPSNGM-IGNMVREALRKRIRFTEDP 63
Query: 70 AHL------LFSANRWEREPTLTKLIEQGITLEIMHSSLENE-----KNL--DQGCTNDR 116
A LF+ +R H L NE K L D R
Sbjct: 64 AQFNRQMAYLFAGDR--------------------HDHLYNEIDGVMKRLKADTQVITTR 103
Query: 117 YSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQR-RKGFGDERYEQTD 174
Y FS +A++ A + + ++ + P PD V F L E AL+R + E YE
Sbjct: 104 YYFSSLAYN-ANSPEEYEFIYRLNQDFPNPDMVFYFDLPVEVALERVNRRSHQEIYETQT 162
Query: 175 FQRKVAENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
+V NYE++ + W+ +DA + + + + T + Q
Sbjct: 163 KLTQVRNNYEQVFSDYQGNWLKLDATQPPKKIHQTILQTLTQTFESGQ 210
>gi|315425277|dbj|BAJ46945.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
gi|343484336|dbj|BAJ49990.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
Length = 200
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
+I EG D +GKTTQAK L L ++ V+ P G +I E L K++ + ++
Sbjct: 5 YIAVEGIDGAGKTTQAKLLARKLTRHGFRVMNVHEPTDG-KIGGLIREALAKRVNMSEEV 63
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R + + + K +DR S +A+ +A
Sbjct: 64 LALLFAADRLT-----------------LREKIVSAKQSGVYVVSDRSVVSSLAYQSAAL 106
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKDN 189
G+ +W ++ + KPD ++ ++ E +R +RYE F RKV Y ++ +
Sbjct: 107 GLR-NWVYEVNRFAVKPDIIVYIDISPETALKRLRKKSQRYENMVFLRKVKNAYSRVLHD 165
Query: 190 I--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ +D ++ +D V + +++ K S+F P+
Sbjct: 166 FRRVVVVDGEQPVDA----VAETIVE--KLSRFIPV 195
>gi|407783625|ref|ZP_11130823.1| thymidylate kinase [Oceanibaculum indicum P24]
gi|407200924|gb|EKE70928.1| thymidylate kinase [Oceanibaculum indicum P24]
Length = 223
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 33/226 (14%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
S PRG FI EG + +GK+TQ +L D+L+ I + P I + ++
Sbjct: 5 SGTPRGRFITLEGGEGAGKSTQIGRLADWLSSRGIAVETTREPGGAPGAEAIRELIVKGS 64
Query: 63 IELPDQAAH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
IE D A LL +A R ++ +H +LE + + DR+S S
Sbjct: 65 IERWDAMAEALLMTAARRMH------------VVQRIHPALEAGRWV----ICDRFSDST 108
Query: 122 VAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRK--------GFGDERY 170
+A+ G+ Q ++ G KPD L+ L EA R G G++R+
Sbjct: 109 MAYQGYAHGLGREPVDQLQRIAIGGLKPDLTLILDLPVEAGLARAHARGTQTPGTGEDRF 168
Query: 171 EQT--DFQRKVAENY---EKLKDNIWIDIDADKDIDTLGLIVKDIV 211
E+ DF R++ + + + + IDA DID + ++D V
Sbjct: 169 ERMGHDFHRRLRDGFLDIARREPERCAVIDATADIDAVADAIRDAV 214
>gi|417784554|ref|ZP_12432260.1| dTMP kinase [Leptospira interrogans str. C10069]
gi|409952371|gb|EKO06884.1| dTMP kinase [Leptospira interrogans str. C10069]
gi|455790436|gb|EMF42301.1| dTMP kinase [Leptospira interrogans serovar Lora str. TE 1992]
Length = 204
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 29/215 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
F+VFEG D SGK+T K L + L + IPS P + TG + ++LR +IEL +
Sbjct: 8 FVVFEGIDGSGKSTLCKSLTEKLIELGIPSAAFTEPT-NLETGKYLRKFLRGEIELGKEE 66
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
F +R E ++Q I + N D+ DRY +S A+ +
Sbjct: 67 QIEAFLNDREES-------LKQNILPAL---------NSDKNVLLDRYMYSTAAYQS--- 107
Query: 130 GMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTDFQRKVAE 181
G D+S +K L + PD + L+ E L RRK G ER+E K+
Sbjct: 108 GDDLSPEMILKKNLNRNFKIPDLLFYLDLSPSIALERLNRRKE-GKERFETLAQLEKIRS 166
Query: 182 NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
YEK+ I ID +K+ + + +I + IK
Sbjct: 167 AYEKVLPKDTIRIDGNKNQNQIVQECLEIFLTNIK 201
>gi|15639345|ref|NP_218794.1| thymidylate kinase (tmk) [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025587|ref|YP_001933359.1| thymidylate kinase [Treponema pallidum subsp. pallidum SS14]
gi|338706320|ref|YP_004673088.1| dTMP kinase [Treponema paraluiscuniculi Cuniculi A]
gi|378972857|ref|YP_005221461.1| dTMP kinase [Treponema pallidum subsp. pertenue str. SamoaD]
gi|378973924|ref|YP_005222530.1| dTMP kinase [Treponema pallidum subsp. pertenue str. Gauthier]
gi|378974986|ref|YP_005223594.1| dTMP kinase [Treponema pallidum subsp. pallidum DAL-1]
gi|378981833|ref|YP_005230138.1| dTMP kinase [Treponema pallidum subsp. pertenue str. CDC2]
gi|384421878|ref|YP_005631237.1| thymidylate kinase [Treponema pallidum subsp. pallidum str.
Chicago]
gi|408502234|ref|YP_006869678.1| dTMP kinase [Treponema pallidum subsp. pallidum str. Mexico A]
gi|23821760|sp|O83373.1|KTHY_TREPA RecName: Full=Putative thymidylate kinase; AltName: Full=dTMP
kinase
gi|3322633|gb|AAC65341.1| thymidylate kinase (tmk) [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189018162|gb|ACD70780.1| thymidylate kinase [Treponema pallidum subsp. pallidum SS14]
gi|291059744|gb|ADD72479.1| thymidylate kinase [Treponema pallidum subsp. pallidum str.
Chicago]
gi|335344381|gb|AEH40297.1| dTMP kinase [Treponema paraluiscuniculi Cuniculi A]
gi|374677180|gb|AEZ57473.1| dTMP kinase [Treponema pallidum subsp. pertenue str. SamoaD]
gi|374678250|gb|AEZ58542.1| dTMP kinase [Treponema pallidum subsp. pertenue str. CDC2]
gi|374679319|gb|AEZ59610.1| dTMP kinase [Treponema pallidum subsp. pertenue str. Gauthier]
gi|374680384|gb|AEZ60674.1| dTMP kinase [Treponema pallidum subsp. pallidum DAL-1]
gi|408475597|gb|AFU66362.1| dTMP kinase [Treponema pallidum subsp. pallidum str. Mexico A]
Length = 208
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 86/213 (40%), Gaps = 45/213 (21%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
F+VFEG D +G +TQ + L + F P G +I + L+K++ + +A
Sbjct: 7 FVVFEGIDGTGTSTQLRALERHFQARK-DMVFTQEPTGG-EIGTLIRDVLQKRVIMSSKA 64
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTN------DRYSFSGVA 123
LLF+A+R H LE ++ DRY FS +
Sbjct: 65 LGLLFAADR--------------------HEHLEGAGGINDCLAEGKIVLCDRYVFSSLV 104
Query: 124 FSAAKEGMDISWCFQPE--KGLPKPDAVLLFKLNEEALQRR---KGFGDERYEQTDFQRK 178
+ +GM +S F E K P P+ V F E R +G E YE T FQ K
Sbjct: 105 Y----QGMAVSGSFAYELNKEFPLPEVVFYFDAPIEVCVERITARGLQTELYEYTSFQEK 160
Query: 179 VAENYEKLKDNI--------WIDIDADKDIDTL 203
+ YE + I+IDA ++I+ +
Sbjct: 161 ARKGYETIFRKCRHLYPAMKVIEIDAREEIEVV 193
>gi|410451682|ref|ZP_11305684.1| dTMP kinase [Leptospira sp. Fiocruz LV3954]
gi|410014448|gb|EKO76578.1| dTMP kinase [Leptospira sp. Fiocruz LV3954]
Length = 202
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 25/219 (11%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKK 62
+I + F VFEG D SGK+T K L D LN+ IPS VNF + T TG + ++L+ +
Sbjct: 2 KIEKPIFAVFEGIDGSGKSTLCKSLTDRLNERGIPS--VNFTEPTNFETGKYLRKFLKGE 59
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
I+L + F +R E LI+ + SL++ KN+ DRY +S
Sbjct: 60 IDLGREEQIDAFLNDREE------SLIQN------ILPSLKSSKNV----LLDRYMYSTA 103
Query: 123 AFSAAKEGMDISWCFQP-EKGLPKPDAVLLFKLNE----EALQRRKGFGDERYEQTDFQR 177
A+ + + + + + E+ PD + LN E L RRK ER+E +
Sbjct: 104 AYQSGDDFLPETIIEKNLERNFKIPDLLFYLDLNPAIALERLNRRKE-NKERFETSIQLE 162
Query: 178 KVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
K+ Y+++ I ID +K D + +I + +K
Sbjct: 163 KIRFAYDRILPKGTIRIDGEKGPDQIVFECLEIFLKKLK 201
>gi|315427436|dbj|BAJ49042.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
gi|315427468|dbj|BAJ49072.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
Length = 200
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
+I EG D +GKTTQAK L L ++ V+ P G +I E L K++ + ++
Sbjct: 5 YIAVEGIDGAGKTTQAKLLARKLTRHGFRVMNVHEPTDG-KIGGLIREALAKRVNMSEEV 63
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R + + + K +DR S +A+ +A
Sbjct: 64 LALLFAADRLT-----------------LREKIVSAKQSGVYVVSDRSVVSSLAYQSAAL 106
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLKDN 189
G+ +W ++ + KPD ++ ++ E +R +RYE F RKV Y ++ +
Sbjct: 107 GLR-NWVYEVNRFAVKPDIIVYIDISPETALKRLRKKSQRYENMVFLRKVKNAYSRVLHD 165
Query: 190 I--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPL 223
+ +D ++ +D V + +++ K S+F P+
Sbjct: 166 FRRVVVVDGEQPVDA----VAEAIVE--KLSRFIPV 195
>gi|398337732|ref|ZP_10522437.1| thymidylate kinase [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 202
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 95/206 (46%), Gaps = 37/206 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKKIELPDQ 68
FIVFEG D SGK+T K L + L+ I S + F + T + TG + ++LR +IEL +
Sbjct: 8 FIVFEGIDGSGKSTLCKSLTEKLSARGISS--IGFTEPTSLETGKYLRKFLRGEIELGRE 65
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
F +R E + Q I SLE+ KN+ DRY +S A+ +
Sbjct: 66 EQIEAFLNDRNES-------LRQNIL-----PSLESGKNV----LLDRYMYSTAAYQS-- 107
Query: 129 EGMDISWCFQPEKGLPK--------PDAVLLFKLNEE-ALQR--RKGFGDERYEQTDFQR 177
G D+S PE L K PD + L E AL+R R+ ER+E +
Sbjct: 108 -GEDLS----PETILKKNLERNFKTPDVLFYLDLKPEIALERLDRRKENKERFETLSQLQ 162
Query: 178 KVAENYEKLKDNIWIDIDADKDIDTL 203
K+ YE++ I ID +K D +
Sbjct: 163 KIHSAYERILPQETIRIDGEKGPDQI 188
>gi|256419682|ref|YP_003120335.1| thymidylate kinase [Chitinophaga pinensis DSM 2588]
gi|256034590|gb|ACU58134.1| thymidylate kinase [Chitinophaga pinensis DSM 2588]
Length = 228
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 44/206 (21%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST-GHIIDEYLRKKI----E 64
FI EG D +GK+TQ L + N+ I ++FV+FP G +I ++LR + +
Sbjct: 7 FIAIEGLDGAGKSTQINLLQQFFNQQGIETRFVHFPIVQEGVFGEMIAKFLRGEFGDVKD 66
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ Q LLF+ +R T+ + + G + + DRY S +AF
Sbjct: 67 VHPQLVALLFAEDRKAFSHTINEWLASGYVVLV-----------------DRYVLSNIAF 109
Query: 125 SAAKEGMDIS------WC--FQPEKG-LPKPD-AVLL---FKLNEEALQRRKGFGDERY- 170
AK D W F+ E +P+PD +V L F E+AL RR+ D +Y
Sbjct: 110 QCAKLKTDKEKQELRDWINMFEYEYNRIPQPDLSVYLDVPFSHTEQALARRRSGEDRKYL 169
Query: 171 ------EQTDF--QRKVAENYEKLKD 188
+ DF Q V YE L D
Sbjct: 170 NGKDDIHEKDFSLQLAVKREYEILAD 195
>gi|359683848|ref|ZP_09253849.1| thymidylate kinase [Leptospira santarosai str. 2000030832]
gi|418744898|ref|ZP_13301243.1| dTMP kinase [Leptospira santarosai str. CBC379]
gi|418755380|ref|ZP_13311587.1| dTMP kinase [Leptospira santarosai str. MOR084]
gi|409964391|gb|EKO32281.1| dTMP kinase [Leptospira santarosai str. MOR084]
gi|410794229|gb|EKR92139.1| dTMP kinase [Leptospira santarosai str. CBC379]
Length = 202
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKK 62
+I + F VFEG D SGK+T K L D LN+ IPS VNF + T TG + ++L+ +
Sbjct: 2 KIEKPIFAVFEGIDGSGKSTLCKSLTDRLNERGIPS--VNFTEPTNFETGKYLRKFLKGE 59
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
I+L + F +R E+ + I+ SL++ KN+ DRY +S
Sbjct: 60 IDLGREEQIDAFLNDR-----------EKSLIQNIL-PSLKSGKNV----LLDRYMYSTA 103
Query: 123 AFSAAKEGMDISWCFQPEKGLPK--------PDAVLLFKLNE----EALQRRKGFGDERY 170
A+ + + F PE + K PD + LN E L RRK ER+
Sbjct: 104 AYQSGDD-------FLPETIIEKNLERNFKIPDLLFYLDLNPAIALERLNRRKE-NKERF 155
Query: 171 EQTDFQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
E + K+ Y+++ I ID +K D + +I + +K
Sbjct: 156 ETSIQLEKIRSAYDRILPKGTIRIDGEKGPDQIVFECLEIFLKKLK 201
>gi|153004942|ref|YP_001379267.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5]
gi|152028515|gb|ABS26283.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5]
Length = 214
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 18/184 (9%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FIV EG D +G TTQA+ L D L + P G ++ + L +++
Sbjct: 8 RGRFIVLEGLDGAGTTTQARLLGDRLRASGRSVHVTAEPSGG-PVGSLVRQVLSRRV--- 63
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAF 124
R E E L + H + E L G +DR++ S +A+
Sbjct: 64 --------VGGRGEGELDAGALALLFAADRLDHVAAEIAPKLAGGVDVVSDRFTLSSLAY 115
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFG--DERYEQTDFQRKVAE 181
G D+ W PD L + AL+RR+ E YE ++FQR VA
Sbjct: 116 QGLTTG-DLPWVEAINGRAATPDVTLFLRARPSVALKRRRAASIDPELYEVSEFQRAVAR 174
Query: 182 NYEK 185
+Y++
Sbjct: 175 SYDR 178
>gi|422004655|ref|ZP_16351870.1| thymidylate kinase [Leptospira santarosai serovar Shermani str. LT
821]
gi|417256709|gb|EKT86125.1| thymidylate kinase [Leptospira santarosai serovar Shermani str. LT
821]
Length = 202
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 39/226 (17%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKK 62
+I + F VFEG D SGK+T K L D LN+ IPS VNF + T TG + ++L+ +
Sbjct: 2 KIEKPIFAVFEGIDGSGKSTLCKSLTDRLNERGIPS--VNFTEPTNFETGKYLRKFLKGE 59
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
I+L + F +R E ++ + SL++ KN+ DRY +S
Sbjct: 60 IDLGREEQIDAFLNDREES------------FIQNILPSLKSGKNV----LLDRYMYSTA 103
Query: 123 AFSAAKEGMDISWCFQPEKGLPK--------PDAVLLFKLNE----EALQRRKGFGDERY 170
A+ + + F PE + K PD + LN E L RRK ER+
Sbjct: 104 AYQSGDD-------FLPETIIEKNLERNFKIPDLLFYLDLNPAIALERLNRRKE-NKERF 155
Query: 171 EQTDFQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
E + K+ Y+++ I ID +K D + +I + +K
Sbjct: 156 ETSIQLEKIRSAYDRILPKGTIRIDGEKGPDQIVFECLEIFLKKLK 201
>gi|421100520|ref|ZP_15561143.1| dTMP kinase [Leptospira borgpetersenii str. 200901122]
gi|410796323|gb|EKR98459.1| dTMP kinase [Leptospira borgpetersenii str. 200901122]
Length = 205
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 31/209 (14%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKK 62
+I + F VFEG D SGK+T K L + L + IPS VNF + T TG + ++LR +
Sbjct: 2 KIEKPIFAVFEGIDGSGKSTLCKSLTERLTEQGIPS--VNFTEPTNFETGKYLRKFLRGE 59
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
IEL + F +R E + Q I SLE+ KN+ DRY +S
Sbjct: 60 IELGRKEQIDAFLNDREES-------LRQNIL-----PSLESGKNV----LLDRYMYSTA 103
Query: 123 AFSAAKEGMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTD 174
A+ + G D+ EK L + PD + LN E L RRK ER+E
Sbjct: 104 AYQS---GEDLLPEIIIEKNLKRNFRIPDLLFYLDLNPAIALERLSRRKE-NKERFETLV 159
Query: 175 FQRKVAENYEKLKDNIWIDIDADKDIDTL 203
K+ Y+++ I ID K D +
Sbjct: 160 QLEKIRSAYDRILPKETIRIDGKKGPDEI 188
>gi|303398720|emb|CBW46701.1| A240L [African swine fever virus Georgia 2007/1]
Length = 236
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG I EG + GK+TQA KL + L + + ++FP+ +TG +I + L K IE+
Sbjct: 2 RGILIAIEGINGVGKSTQAMKLKETLECMDYNAICIHFPNPDTTTGDLILQVLNKTIEMS 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ H LF+ +R E + L++ L+ DRY +SG+ ++
Sbjct: 62 SEQLHKLFTKHRSEFIAEIAVLLK-----------------LNYIVIVDRYIWSGLVYAQ 104
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFK----LNEEALQRRKGFGDERYEQTDF 175
A +G+ I K KPD LNE+ L ++ F + ++T F
Sbjct: 105 A-DGITIE-----TKNTFKPDYTFFLSSKKPLNEKPLTLQRLFETKEKQETIF 151
>gi|291514468|emb|CBK63678.1| thymidylate kinase [Alistipes shahii WAL 8301]
Length = 228
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 79/201 (39%), Gaps = 44/201 (21%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST-GHIIDEYLRKKI----E 64
FIV EG D +GK+TQ + L L + + S++V+FP G +I +LR + E
Sbjct: 2 FIVLEGLDGAGKSTQIRMLRQLLAERGVESEYVHFPRFDAPVYGELIARFLRGEFGGVNE 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ LLF+ +R P + I +G + DRY +S V F
Sbjct: 62 VDPYLVALLFAGDRAAAGPQIRAWIAEG-----------------KAVVLDRYVYSNVGF 104
Query: 125 SAAK----EGMD--ISWCFQPEKG---LPKPDAVLL----FKLNEEALQRRKGFGDERYE 171
AK E D W E G LP+PD L F E L + D Y
Sbjct: 105 QCAKLPAGERRDRLAQWILDLEFGYNDLPRPDLSLFLDVPFAFTERKLTEVREGDDRDYL 164
Query: 172 Q---------TDFQRKVAENY 183
Q D QR+V E Y
Sbjct: 165 QGSRDIHEDALDLQRRVREVY 185
>gi|381191065|ref|ZP_09898577.1| thymidylate kinase [Thermus sp. RL]
gi|380451154|gb|EIA38766.1| thymidylate kinase [Thermus sp. RL]
Length = 198
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 80/185 (43%), Gaps = 28/185 (15%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G F+ EG D SGKTTQA++L +L+ P P + + L + EL
Sbjct: 3 GLFLTLEGLDGSGKTTQARRLAAFLDAXGHPVLLTREPGGGLPE---VRSLLLTQ-ELSP 58
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+A +LLFSA+R E + K+I G+ + +DRY S +A+
Sbjct: 59 EAEYLLFSADRAEH---VRKVILPGLAAGXV-------------VISDRYLDSSLAYQGY 102
Query: 128 KEGMDISWCF----QPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ--TDFQRKVAE 181
G+ + W + +GL KP L L EA RR D R E +F R+V E
Sbjct: 103 GRGLPLPWLXEVAREATRGL-KPRLTFLLDLPPEAALRRVRRPD-RLESLGLEFFRRVRE 160
Query: 182 NYEKL 186
Y L
Sbjct: 161 GYLAL 165
>gi|320451196|ref|YP_004203292.1| thymidylate kinase [Thermus scotoductus SA-01]
gi|320151365|gb|ADW22743.1| thymidylate kinase [Thermus scotoductus SA-01]
Length = 199
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 84/188 (44%), Gaps = 31/188 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G F+ EG D SGKTTQA+ L +L + I + P + + + L K L
Sbjct: 2 KGFFLTLEGLDGSGKTTQARLLAQFLEEKGIKVRLTREPGGGLPG---VRDLLLKGEALS 58
Query: 67 DQAAHLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
+A +LLFSA+R E + +E+G +DRY S +A+
Sbjct: 59 PEAEYLLFSADRAEHVRKVILPALEEGFW-----------------VISDRYLDSSLAYQ 101
Query: 126 AAKEGMDISWCFQPEK----GLPKPDAVLLFKL-NEEALQRRKGFGDERYEQTD--FQRK 178
+G+ + W + K GL KPD L L EEAL+R +R E+ F ++
Sbjct: 102 GYGQGLPLPWLKEVAKEATLGL-KPDLTFLLDLPPEEALKRVS--APDRLERMGLPFFQR 158
Query: 179 VAENYEKL 186
V + Y KL
Sbjct: 159 VRQGYLKL 166
>gi|33864255|ref|NP_895815.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9313]
gi|46576455|sp|Q7V4G2.1|KTHY_PROMM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|33641035|emb|CAE22164.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9313]
Length = 216
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 39/235 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G F+V EG D GKTTQ + L ++L ++ + + G + LRK + P
Sbjct: 3 GRFLVLEGIDGCGKTTQLRHLANWLPRSGLMPEGARLHLTREPGGTALGIALRKLVLHPP 62
Query: 68 QAAH-------LLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
A LL++A+R + L + +EQG +DR+S
Sbjct: 63 GDASPEPLAELLLYAADRAQHVAQLIRPALEQG-----------------HWVLSDRFSG 105
Query: 120 SGVAFSAAKEGMDISWCFQPEK----GLPKPDAVLLFKLN-EEALQRRKGFGDERYEQ-- 172
S +A+ +D+ Q E+ GL PD +L EE+L RR ++R E
Sbjct: 106 STLAYQGYGRELDLDLIQQLEQIATAGL-VPDLTFWLELPVEESLLRRDARSNDRIEAEG 164
Query: 173 TDFQRKVAENYEKL-KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLESN 226
DF +VA + L ++ W+ + AD+ ++++ +++ K F PL+ +
Sbjct: 165 VDFLTRVATGFAVLARERSWVPLQADQQVESV-----SSALESQLKHHFGPLQES 214
>gi|406893454|gb|EKD38514.1| hypothetical protein ACD_75C00708G0006 [uncultured bacterium]
Length = 212
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 87/226 (38%), Gaps = 22/226 (9%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M ++ RG IVFEG D +GK+TQ K L YL + P P I + Y+
Sbjct: 1 MKAKAERGKLIVFEGTDGTGKSTQLKLLGSYLEECGYPVVTTREPTNGSYGRQIRNLYIN 60
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ E + LF A+R E L ++ L K + DRY FS
Sbjct: 61 RH-EYSREEELELFLADRREH------------VLHLLEPCLRQGKIV----LCDRYYFS 103
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR--KGFGD--ERYEQTDFQ 176
A+ A G+D P+PD VLL + E R G GD +EQ +F
Sbjct: 104 TAAYQGAL-GLDPETILARNSFAPEPDLVLLLQAPLEIGMERITSGRGDTLNNFEQREFL 162
Query: 177 RKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSP 222
KVA + + IDA I + V D V + P
Sbjct: 163 EKVAAIFAAIDRPYIRRIDASGSIAAVHRQVIDAVASLLALPAAVP 208
>gi|374314842|ref|YP_005061270.1| thymidylate kinase [Sphaerochaeta pleomorpha str. Grapes]
gi|359350486|gb|AEV28260.1| thymidylate kinase [Sphaerochaeta pleomorpha str. Grapes]
Length = 201
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 35/220 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFP-DRTISTGHIIDEYLRKKIELPDQ 68
F+VFEG D +G TTQ K L + ++++I + P D+ I G ++ L+K+I
Sbjct: 8 FVVFEGLDGAGTTTQMKLLAEACDRSDISCRATFEPTDKPI--GRLVRSVLQKQIVTTPL 65
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
A +L++A+ RE L I GI + LE+ K + DRY +S +A+ +
Sbjct: 66 ALAMLYAAD---REDHLYNPI-NGIV-----NDLESGKMV----ICDRYFYSSLAYQGVE 112
Query: 129 EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR---KGFGDERYEQTDFQRKVAENYEK 185
D P P + E RR +G +E +E+ DF KV NYE+
Sbjct: 113 CDYDKIASIN---DFPAPQYIFYIDTPVEECLRRITGRGLTEELFEKKDFLEKVKHNYER 169
Query: 186 L-----KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQF 220
+ K+ I + ID GL+ K+ + I+K F
Sbjct: 170 IFSTLSKEVILVRID--------GLLPKEEIARQIQKVLF 201
>gi|417760140|ref|ZP_12408168.1| dTMP kinase [Leptospira interrogans str. 2002000624]
gi|417766988|ref|ZP_12414936.1| dTMP kinase [Leptospira interrogans serovar Bulgarica str. Mallika]
gi|417775685|ref|ZP_12423536.1| dTMP kinase [Leptospira interrogans str. 2002000621]
gi|418673929|ref|ZP_13235240.1| dTMP kinase [Leptospira interrogans str. 2002000623]
gi|400350557|gb|EJP02817.1| dTMP kinase [Leptospira interrogans serovar Bulgarica str. Mallika]
gi|409944099|gb|EKN89688.1| dTMP kinase [Leptospira interrogans str. 2002000624]
gi|410574559|gb|EKQ37590.1| dTMP kinase [Leptospira interrogans str. 2002000621]
gi|410579207|gb|EKQ47057.1| dTMP kinase [Leptospira interrogans str. 2002000623]
Length = 204
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 29/215 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
F+VFEG D SGK+T K L L + IPS P + TG + ++LR +IEL +
Sbjct: 8 FVVFEGIDGSGKSTLCKSLTGKLIELGIPSAAFTEPT-NLETGKYLRKFLRGEIELGKEE 66
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
F +R E ++Q I + N D+ DRY +S A+ +
Sbjct: 67 QIEAFLNDREES-------LKQNILPAL---------NSDKNVLLDRYMYSTAAYQS--- 107
Query: 130 GMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTDFQRKVAE 181
G D+S +K L + PD + L+ E L RRK G ER+E K+
Sbjct: 108 GDDLSPEMILKKNLNRNFKIPDLLFYLDLSPSIALERLNRRKE-GKERFETLAQLEKIRS 166
Query: 182 NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
YEK+ I ID +K+ + + +I + IK
Sbjct: 167 AYEKILPKDTIRIDGNKNQNQIVQECLEIFLTNIK 201
>gi|78044441|ref|YP_358922.1| thymidylate kinase [Carboxydothermus hydrogenoformans Z-2901]
gi|123577218|sp|Q3AG12.1|KTHY_CARHZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|77996556|gb|ABB15455.1| thymidylate kinase [Carboxydothermus hydrogenoformans Z-2901]
Length = 203
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 89/204 (43%), Gaps = 32/204 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI EG + SGKTTQ + + YL + NIP P T I + L +
Sbjct: 2 RGKFITIEGVEGSGKTTQIQYIARYLTEKNIPHIITREPGGTALGKKIRELLLNPSYPVV 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAF 124
+A LL+ A+R + H + +LD+G +DRY S +A+
Sbjct: 62 PEAEILLYLADRAQ------------------HVGEKIIPHLDKGVWVISDRYFDSTLAY 103
Query: 125 SAAKEGMDI----SWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD----ERYEQTDF 175
G D+ S+ KGL PD +L L E L R KG G+ ER E +F
Sbjct: 104 QGYGRGFDLTLLKSFIAFATKGL-IPDLTVLIDLPPEVGLSRVKGRGEYDRLER-ETLEF 161
Query: 176 QRKVAENYEKL-KDNIWIDIDADK 198
++V E + +L +D + +D K
Sbjct: 162 HQRVREGFLQLARDQRFRVVDGRK 185
>gi|404403818|ref|ZP_10995402.1| thymidylate kinase [Alistipes sp. JC136]
Length = 228
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 79/201 (39%), Gaps = 44/201 (21%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST-GHIIDEYLRKKI----E 64
FIV EG D +GK+TQ + L ++ + S++V+FP G +I +LR + E
Sbjct: 2 FIVLEGLDGAGKSTQIRMLRRLFSERGVESEYVHFPRFDAPVYGELIARFLRGEFGGVNE 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ LLF+ +R P + + I G + DRY +S V F
Sbjct: 62 VDPYLVALLFAGDRAAAGPQIREWIAAG-----------------KAVILDRYVYSNVGF 104
Query: 125 SAAK----EGMD--ISWCFQPEKG---LPKPDAVLL----FKLNEEALQRRKGFGDERYE 171
AK E D W E G LP+PD L F E L + D Y
Sbjct: 105 QCAKLPAGESRDRLAQWILDLEFGYNDLPRPDMSLFLDVPFTFTESKLTEAREGDDRTYL 164
Query: 172 Q---------TDFQRKVAENY 183
Q D QR+V E Y
Sbjct: 165 QGGQDIHEGALDLQRRVREVY 185
>gi|384431789|ref|YP_005641149.1| thymidylate kinase [Thermus thermophilus SG0.5JP17-16]
gi|333967257|gb|AEG34022.1| Thymidylate kinase [Thermus thermophilus SG0.5JP17-16]
Length = 198
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 80/185 (43%), Gaps = 28/185 (15%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G F+ EG D SGKTTQA++L +L P P + + L + EL
Sbjct: 3 GLFLTLEGLDGSGKTTQARRLAAFLEAQGHPVLLTREPGGGLPE---VRSLLLTQ-ELSP 58
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+A +LLFSA+R E + K+I G+ + +DRY S +A+
Sbjct: 59 EAEYLLFSADRAEH---VRKVILPGLA-------------AGKVVISDRYLDSSLAYQGY 102
Query: 128 KEGMDISW----CFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ--TDFQRKVAE 181
G+ + W + +GL KP L L EA RR D R E+ +F R+V E
Sbjct: 103 GRGLPLPWLQEVAREATRGL-KPRLTFLLDLPPEAALRRVRRPD-RLERLGLEFFRRVRE 160
Query: 182 NYEKL 186
Y L
Sbjct: 161 GYLAL 165
>gi|418670512|ref|ZP_13231883.1| dTMP kinase [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418710373|ref|ZP_13271144.1| dTMP kinase [Leptospira interrogans serovar Grippotyphosa str. UI
08368]
gi|418729328|ref|ZP_13287875.1| dTMP kinase [Leptospira interrogans str. UI 12758]
gi|410753894|gb|EKR15552.1| dTMP kinase [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410769309|gb|EKR44551.1| dTMP kinase [Leptospira interrogans serovar Grippotyphosa str. UI
08368]
gi|410775506|gb|EKR55497.1| dTMP kinase [Leptospira interrogans str. UI 12758]
gi|456969973|gb|EMG10854.1| dTMP kinase [Leptospira interrogans serovar Grippotyphosa str.
LT2186]
Length = 204
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 29/215 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
F+VFEG D SGK+T K L L + IPS P + TG + ++LR +IEL +
Sbjct: 8 FVVFEGIDGSGKSTLCKSLTGKLIELGIPSAAFTEPT-NLETGKYLRKFLRGEIELGKEE 66
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
F +R E ++Q I + N D+ DRY +S A+ +
Sbjct: 67 QIEAFLNDREES-------LKQNILPAL---------NSDKNVLLDRYMYSTAAYQS--- 107
Query: 130 GMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTDFQRKVAE 181
G D+S +K L + PD + L+ E L RRK G ER+E K+
Sbjct: 108 GDDLSPEMILKKNLNRNFKIPDLLFYLDLSPSIALERLNRRKE-GKERFETLAQLEKIRS 166
Query: 182 NYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
YEK+ I ID +K+ + + +I + IK
Sbjct: 167 AYEKVLPKDTIRIDGNKNQNQIVQECLEIFLTNIK 201
>gi|327398213|ref|YP_004339082.1| thymidylate kinase [Hippea maritima DSM 10411]
gi|327180842|gb|AEA33023.1| Thymidylate kinase [Hippea maritima DSM 10411]
Length = 201
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 29/199 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
+I FEG D SGKTTQAK VD+L K F P TI E L K +L QA
Sbjct: 12 YIAFEGIDASGKTTQAKLFVDFLKKEGFNVFFTKEPGGTIP---FFREVLLNK-QLVKQA 67
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LF A+R + T+ K ++ G + +DR +S +A+ +
Sbjct: 68 QLFLFLADRAQTILTIKKKLDAGFVV-----------------VSDRSFYSTLAYQGFGD 110
Query: 130 GMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRKGFGDE-RYEQTDFQRKVAENYEK 185
MDI + Q + G KPD V + + R D + F +V + Y K
Sbjct: 111 DMDIGFLKQANEIATGGLKPDLVFCIDITTNEMMNRLNKKDAIESKPVGFFERVRQGYIK 170
Query: 186 LK---DNIWIDIDADKDID 201
L DN ++ ++ + ID
Sbjct: 171 LSKDYDNFYL-VNGLRSID 188
>gi|170077931|ref|YP_001734569.1| thymidylate kinase [Synechococcus sp. PCC 7002]
gi|169885600|gb|ACA99313.1| thymidylate kinase [Synechococcus sp. PCC 7002]
Length = 219
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 92/227 (40%), Gaps = 44/227 (19%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+ FIVFEG D SG +TQA+ L + + IP+ P I G+++ E LR+++
Sbjct: 6 QAKFIVFEGIDGSGSSTQAELLYQHFQRQKIPAVLSPEPSNGI-IGNLVRETLRQRLRFT 64
Query: 67 DQAAHL------LFSANRWEREPTLTKLIEQGITLEIMHSSLENE-----KNLDQG--CT 113
L LF+ +R H L NE K L G
Sbjct: 65 TDPVQLNRQLAYLFAGDR--------------------HDHLYNEIDGVFKQLAAGIQVI 104
Query: 114 NDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEA----LQRRKGFGDER 169
RY FS +A++ A + + ++ + P PD V L E +QRR E
Sbjct: 105 TTRYYFSSLAYN-ANNAAEYEFIYRLNQDFPNPDLVFYCDLPVEVALERVQRRS--HQEI 161
Query: 170 YEQTDFQRKVAENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVID 213
YE +V +NY+++ W +DA + +T+ + + D
Sbjct: 162 YETKAKLTQVRQNYQQIFQTYPGNWQQLDATQPPETIHQQILQTIAD 208
>gi|124024337|ref|YP_001018644.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9303]
gi|166223100|sp|A2CD19.1|KTHY_PROM3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|123964623|gb|ABM79379.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9303]
Length = 216
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 39/235 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G +V EG D GKTTQ + L ++L ++ + + G + LRK + P
Sbjct: 3 GRLLVLEGIDGCGKTTQLRHLANWLPRSGLMPEGARLHLTREPGGTALGMALRKLVLHPP 62
Query: 68 QAAH-------LLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
A LL++A+R + L + +EQG +DR+S
Sbjct: 63 GDASPEPLAELLLYAADRAQHVAQLIRPALEQG-----------------HWVLSDRFSG 105
Query: 120 SGVAFSAAKEGMDISWCFQPEK----GLPKPDAVLLFKLN-EEALQRRKGFGDERYEQ-- 172
S +A+ +D+ Q E+ GL PD +L+ EE+L RR ++R E
Sbjct: 106 STLAYQGYGRELDLDLIQQLEQIATAGL-VPDLTFWLELSVEESLVRRDARSNDRIEAEG 164
Query: 173 TDFQRKVAENYEKL-KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLESN 226
DF +VA + L ++ W+ + AD+ ++++ +++ K F PL+ +
Sbjct: 165 VDFLTRVATGFAVLARERSWVPLQADQQVESV-----SSALESQLKHHFGPLQES 214
>gi|150400777|ref|YP_001324543.1| thymidylate kinase [Methanococcus aeolicus Nankai-3]
gi|166221752|sp|A6UTV9.1|KTHY_META3 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|150013480|gb|ABR55931.1| dTMP kinase [Methanococcus aeolicus Nankai-3]
Length = 196
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D SGKTTQAK L DYLN + P G +I + L K ++
Sbjct: 4 FIVFEGIDGSGKTTQAKLLADYLN-----GIYTCEPTNG-EIGQLIRKVLGGK-NCEKES 56
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+ +R E EI H +EN DRY +S + + + +
Sbjct: 57 LALLFAGDRVEH------------IKEIEHKLIENM------VICDRYVYSSMVYQSI-Q 97
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGD--ERYEQTDFQRKVAENY 183
G+DI + + PD ++ ++ E +R G D E +E + +KV + Y
Sbjct: 98 GIDIDFIASINRFAKIPDVLIYLDVSIEESLKRMGDRDSKEIFENKEILQKVNKKY 153
>gi|375090895|ref|ZP_09737202.1| thymidylate kinase [Helcococcus kunzii ATCC 51366]
gi|374565031|gb|EHR36309.1| thymidylate kinase [Helcococcus kunzii ATCC 51366]
Length = 207
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 93/221 (42%), Gaps = 30/221 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KIEL 65
RG FI FEG D SGK+T K+ +YL +NNI P T I D + E+
Sbjct: 2 RGKFIAFEGSDGSGKSTVLSKVREYLEENNISYIITREPGGTKIGEQIRDILINNDNTEM 61
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D+ LLF+A R + +E+ + E+ L +DRY S +A+
Sbjct: 62 DDKTEALLFAAARAQS-------VEEKLKKELGQKEL---------VISDRYVLSSLAYQ 105
Query: 126 AAKEGMDISWCFQPE---KGLPKPDAVLLFKLNE-EALQRRKG-FGDERYEQ--TDFQRK 178
G+ + KPD ++ L+R+K +R E+ +F K
Sbjct: 106 GYARGLGVDGVRSINDFATSSLKPDYTFFLDVDPITVLERKKSQVEADRLEEEGNNFHEK 165
Query: 179 VAENYEKLKDN--IWIDIDADKDIDTLGLIVKDIVIDTIKK 217
V Y+KL +N I IDA K I+ V D I IKK
Sbjct: 166 VYIGYKKLIENEKNLIVIDASKPIEE----VVDQTIKNIKK 202
>gi|46199545|ref|YP_005212.1| thymidylate kinase [Thermus thermophilus HB27]
gi|55981576|ref|YP_144873.1| thymidylate kinase [Thermus thermophilus HB8]
gi|59798322|sp|Q72I89.1|KTHY_THET2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|73920831|sp|Q5SHX3.1|KTHY_THET8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|46197171|gb|AAS81585.1| probable thymidylate kinase [Thermus thermophilus HB27]
gi|55772989|dbj|BAD71430.1| probable thymidylate kinase (TMP kinase) [Thermus thermophilus HB8]
Length = 198
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 79/190 (41%), Gaps = 38/190 (20%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G F+ EG D SGKTTQA++L +L P P + + L + EL
Sbjct: 3 GLFLTLEGLDGSGKTTQARRLAAFLEAQGRPVLLTREPGGGLPE---VRSLLLTQ-ELSP 58
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+A +LLFSA+R E + K+I G+ + +DRY S +A+
Sbjct: 59 EAEYLLFSADRAEH---VRKVILPGLA-------------AGKVVISDRYLDSSLAYQGY 102
Query: 128 KEGMDISW----CFQPEKGLPKPDAVLLFKLNEEALQRR-------KGFGDERYEQTDFQ 176
G+ + W + +GL KP L L EA RR +G G E F
Sbjct: 103 GRGLPLPWLREVAREATRGL-KPRLTFLLDLPPEAALRRVRRPDRLEGLGLE------FF 155
Query: 177 RKVAENYEKL 186
R+V E Y L
Sbjct: 156 RRVREGYLAL 165
>gi|406907098|gb|EKD48036.1| hypothetical protein ACD_65C00150G0002 [uncultured bacterium]
Length = 191
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 21/146 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTI-STGHIIDEYLRKKIE--LP 66
FI G + GKTT AKKLV+ LNK +++V +P + TG +++ LR E +
Sbjct: 2 FIALYGINNIGKTTHAKKLVERLNKEGHKAKYVKYPVYDLPPTGPYLNQILRGGSEQKIS 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ + F+ NR++ EP + K + QG + + Y +G+A+
Sbjct: 62 EAELQMWFTLNRYQFEPQIKKWLSQGYIV-----------------VAEDYIGTGIAWGT 104
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLF 152
AK G+D W + + L D +L
Sbjct: 105 AK-GLDTHWIERLNQYLLSEDLGILL 129
>gi|374327845|ref|YP_005086045.1| thymidylate kinase (tmk) [Pyrobaculum sp. 1860]
gi|356643114|gb|AET33793.1| thymidylate kinase (tmk) [Pyrobaculum sp. 1860]
Length = 199
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 30/180 (16%)
Query: 9 AFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQ 68
AF+ EG D SGK+T + L L K + + + P G +I E+ K +
Sbjct: 2 AFVAVEGIDGSGKSTVIQLLAKLLPKVYVTKEPSDGP-----VGRLIKEWALKGGSVDPH 56
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSA 126
LLF+A+R E H E E + +G ++RY S +A+
Sbjct: 57 VDALLFAADRIE------------------HYKREVEPKIREGYLVISERYVESSIAYQG 98
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQ---RRKGFGDERYEQTDFQRKVAENY 183
A G+ I + K +P+PD ++ ++ E + RR+G E+YE F R+V E Y
Sbjct: 99 AA-GVPIDFIKYINKLVPRPDLTVILDVDPEVAEARIRRRGH-VEKYEYVQFLRRVREIY 156
>gi|358336609|dbj|GAA42899.2| putative thymidylate kinase 251L [Clonorchis sinensis]
Length = 670
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 27/145 (18%)
Query: 74 FSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK----E 129
+ RWER+ ++ + GI + DRYS+SG+ +AAK
Sbjct: 1 MAIRRWERQRDISTALANGINV-----------------VADRYSYSGIVNTAAKITPLS 43
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQR---RKGFGDERYEQTDFQRKVAENYEKL 186
D +WC E GL P+ L+F L E L R+GFG + E T FQ +V Y +L
Sbjct: 44 NADWAWCRSTESGLLPPN--LIFCLAGENLSEIAAREGFGQKPSETTSFQSRVLAYYARL 101
Query: 187 KDNIWIDIDADKDIDTLGLIVKDIV 211
+ +++ ++D+ T G V +V
Sbjct: 102 CQEMEAELN-EEDLRTTGCDVDFLV 125
>gi|167769946|ref|ZP_02441999.1| hypothetical protein ANACOL_01287 [Anaerotruncus colihominis DSM
17241]
gi|167667937|gb|EDS12067.1| dTMP kinase [Anaerotruncus colihominis DSM 17241]
Length = 221
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
+G IV +G D +GK TQA L+D + +P++ ++FPD T + ++ +YL +
Sbjct: 2 KGRLIVIDGLDGAGKQTQAALLLDRFARAGVPARGISFPDYTHPSSALVKQYLAGEFGQA 61
Query: 64 -ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
++P AA ++ +R+ K ++ DRY+ S +
Sbjct: 62 DDVPAYAASSFYAVDRFASYVGYWK----------------DDYLAGHTIIADRYATSNL 105
Query: 123 AFSAAK-------EGMDISWCFQPEK-GLPKPDAVLLFKLNEEALQR 161
K +D S F+ EK GLPKPDAVL ++ + +R
Sbjct: 106 IHQMGKLPRGQWDAFIDWSADFEYEKLGLPKPDAVLFLDMHPDVSER 152
>gi|119872697|ref|YP_930704.1| dTMP kinase [Pyrobaculum islandicum DSM 4184]
gi|119674105|gb|ABL88361.1| thymidylate kinase [Pyrobaculum islandicum DSM 4184]
Length = 205
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 29/217 (13%)
Query: 9 AFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQ 68
AF+ EG D SGK+T +L + L K + + P G +I E+ K +
Sbjct: 2 AFVAIEGIDGSGKSTVILQLAEMLPKVYVTREPSGGP-----IGRLIKEWALKGGTIDPH 56
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSA 126
LLF+A+R E H E E + +G ++RY S +A+
Sbjct: 57 VDALLFAADRIE------------------HYKREIEPKVREGYIVISERYIESSIAYQG 98
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYEQTDFQRKVAENY- 183
A G+ I + +PK D ++ ++ E A+ R K GD E+YE + F ++V E Y
Sbjct: 99 AA-GVPIDFIKIINSAVPKADITIILDVDPEIAIARIKQRGDSEKYEHSAFLKRVREIYL 157
Query: 184 EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQF 220
++ ++ + +DA + + + V +I+ + ++
Sbjct: 158 QRAREEGYPVVDASRPPNVVAKDVAEIITQMLNYRKY 194
>gi|123351693|ref|XP_001295357.1| thymidylate kinase family protein [Trichomonas vaginalis G3]
gi|121874114|gb|EAX82427.1| thymidylate kinase family protein [Trichomonas vaginalis G3]
Length = 202
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 88/203 (43%), Gaps = 29/203 (14%)
Query: 9 AFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI-ELPD 67
FI FEG D SGK+T + D L KNNI + P T + I D L K + E+
Sbjct: 3 VFITFEGPDGSGKSTICNLVYDELIKNNIETIKTREPGGTRISEKIRDIILDKDLNEMDM 62
Query: 68 QAAHLLFSANRWEREPTLTKLI---EQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ LL+SA+R + T K+I E GIT+ +RY S +A+
Sbjct: 63 RTEALLYSASRAQH--TYEKIIPALEDGITV-----------------LCERYVLSSLAY 103
Query: 125 SAAKEGM---DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERY--EQTDFQRKV 179
G DI G PD V +F+ N L R+ +R E DF +KV
Sbjct: 104 QGHARGQKLEDIRAINDFATGGKNPDIVFIFRTNNSTLTRKDQACYDRLECEGDDFHKKV 163
Query: 180 AENYEKL-KDNIWIDIDADKDID 201
+ Y L K+ + ID ++ I+
Sbjct: 164 RDYYNDLEKEGNYYFIDVNQTIE 186
>gi|410938246|ref|ZP_11370101.1| dTMP kinase [Leptospira noguchii str. 2006001870]
gi|410786664|gb|EKR75600.1| dTMP kinase [Leptospira noguchii str. 2006001870]
Length = 204
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 31/218 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKKIELPDQ 68
F+VFEG D SGK+T + L L + IPS V F + T + TG + ++LR +IEL +
Sbjct: 8 FVVFEGIDGSGKSTLCRSLTKKLIELGIPS--VTFTEPTNLETGKYLRKFLRGEIELGKE 65
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
F +R E ++Q I + N D+ DRY +S A+ +
Sbjct: 66 EQIQAFLNDREES-------LKQNILPAL---------NSDKNVLLDRYMYSTAAYQS-- 107
Query: 129 EGMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTDFQRKVA 180
G D+S +K L + PD + L+ E L RRK ER+E K+
Sbjct: 108 -GDDLSPEIILKKNLDRNFKIPDLLFYLDLSPTIALERLNRRKE-DKERFETLTQLEKIH 165
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKS 218
YEK+ + +D +K+ + + L +I + I+K+
Sbjct: 166 SAYEKILPKDTVRVDGNKEPNQIVLECLEIFLKKIEKN 203
>gi|296109540|ref|YP_003616489.1| thymidylate kinase [methanocaldococcus infernus ME]
gi|295434354|gb|ADG13525.1| thymidylate kinase [Methanocaldococcus infernus ME]
Length = 184
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 28/178 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D SGKTT +K L L S + G +I YL + + +
Sbjct: 2 FIVFEGIDGSGKTTLSKMLAKEL------SGYWTCEPTDGEIGRLIRSYLSSG-NIDNIS 54
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R E + K++ G D C DRY +S +A+ ++
Sbjct: 55 LSLLFAADRVEHCKEIEKVLNSG---------------RDVIC--DRYLYSSIAYQSSL- 96
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
G++ ++ ++ K KPD V L ++ +EA++R K G + +E +F KV E Y +L
Sbjct: 97 GVEENFLWEINKYAIKPDLVFLLVVDVDEAMKRVK--GKDIFENKNFLEKVQEKYLEL 152
>gi|389860445|ref|YP_006362684.1| thymidylate kinase [Thermogladius cellulolyticus 1633]
gi|388525348|gb|AFK50546.1| thymidylate kinase [Thermogladius cellulolyticus 1633]
Length = 205
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 86/211 (40%), Gaps = 33/211 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG F+V EG D SGKT+ A L+ L + + + P + + EY +
Sbjct: 8 RGLFLVLEGLDGSGKTSIANILISRLGELGYRATYTYEPYDSSIVRAVKGEYSSARDAYV 67
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC--TNDRYSFSGVAF 124
D A+ L +LI H E L +G DRY +S VA+
Sbjct: 68 DALAY------------ALDRLI---------HWKTVIEPALREGAVVVCDRYFYSSVAY 106
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGDE--RYEQTDFQRKVAE 181
A G W + + P+PD + + L R+KG YE+ DF +V E
Sbjct: 107 QTAS-GAPYEWVLEVNRFAPRPDLAVYLDVEPSLGLARKKGVPSRFPEYERVDFLSRVRE 165
Query: 182 NYEKL-KDNIWIDIDADKDI-----DTLGLI 206
Y ++ ++ + + +D+ + + D GL+
Sbjct: 166 VYLRMVREGLLVVVDSSRGLEEVFRDVWGLV 196
>gi|406919054|gb|EKD57464.1| Thymidylate kinase [uncultured bacterium]
Length = 233
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 39/211 (18%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST-GHIIDEYLRKKI-EL 65
G IVFEG D SGKT QAK L+++L +N IP +++FP S G ++ YL EL
Sbjct: 7 GKLIVFEGADGSGKTVQAKLLLNFLKRNKIPCTYISFPRYEDSLWGKMVRRYLEGDFGEL 66
Query: 66 PD---QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+ A +L++ +R+ + + +E G + +RY S +
Sbjct: 67 KNVDPYLASMLYAGDRFSASTQVREWLELG-----------------KLVICNRYVGSNL 109
Query: 123 AFSAAK---EGMDISWCFQPEK------GLPKPDAVLLFKLNEEALQRRKGFGDERYEQT 173
A A K +G+ I + EK +PK D V+ + E RK GD + +
Sbjct: 110 AHMAGKMKDKGLRIKFTKWLEKLEYQENKIPKEDLVIFLHVPVEI--SRKLIGDRKLDIH 167
Query: 174 D----FQRKVAENYEKLKDNI--WIDIDADK 198
+ + +V + Y L + W+ +D K
Sbjct: 168 EADLGYLERVVDVYNDLAMHRKNWVKVDCVK 198
>gi|302795085|ref|XP_002979306.1| hypothetical protein SELMODRAFT_418926 [Selaginella moellendorffii]
gi|300153074|gb|EFJ19714.1| hypothetical protein SELMODRAFT_418926 [Selaginella moellendorffii]
Length = 402
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 22/93 (23%)
Query: 44 FPDRTISTGHIIDEYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLE 103
+P RT ++ +L + +L D+A H+LFSANRW+ + + K + G TL +
Sbjct: 4 WPARTSRLRCLL--FLGRGADLDDRAVHILFSANRWDLK--MEKKLMAGTTLVV------ 53
Query: 104 NEKNLDQGCTNDRYSFSGVAFSAAKEGMDISWC 136
DR+S+SGVAFSAAK G+D+ WC
Sbjct: 54 -----------DRFSYSGVAFSAAK-GLDLEWC 74
>gi|171184628|ref|YP_001793547.1| dTMP kinase [Pyrobaculum neutrophilum V24Sta]
gi|170933840|gb|ACB39101.1| dTMP kinase [Pyrobaculum neutrophilum V24Sta]
Length = 204
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 9 AFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQ 68
AF+ EG D SGK+T +L + L K + P G +I E+ + +
Sbjct: 2 AFVAIEGIDGSGKSTVISRLAEILPKVYTTREPSGGP-----IGRLIKEWALRGGTVDPH 56
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSA 126
LLF+A+R E H E E + +G ++RY S +A+
Sbjct: 57 VDALLFAADRIE------------------HYRREVEPKVREGYIVISERYVESSIAYQG 98
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYEQTDFQRKVAENY- 183
A G+ + + +P+PD ++ + E A+ R + G E+YEQ F R+V E Y
Sbjct: 99 AA-GVPLEFIKSINSLVPRPDVTVILDVEPEVAISRVRQRGALEKYEQMAFLRRVREIYL 157
Query: 184 EKLKDNIWIDIDADKDIDTLGLIVKDIV 211
+ ++ + +DA + + + V +IV
Sbjct: 158 ARAREEGYPVVDAARPPEVVAREVAEIV 185
>gi|418718417|ref|ZP_13277950.1| dTMP kinase [Leptospira borgpetersenii str. UI 09149]
gi|418737480|ref|ZP_13293877.1| dTMP kinase [Leptospira borgpetersenii serovar Castellonis str.
200801910]
gi|421093637|ref|ZP_15554361.1| dTMP kinase [Leptospira borgpetersenii str. 200801926]
gi|410363620|gb|EKP14649.1| dTMP kinase [Leptospira borgpetersenii str. 200801926]
gi|410744779|gb|EKQ93515.1| dTMP kinase [Leptospira borgpetersenii str. UI 09149]
gi|410746674|gb|EKQ99580.1| dTMP kinase [Leptospira borgpetersenii serovar Castellonis str.
200801910]
gi|456888965|gb|EMF99896.1| dTMP kinase [Leptospira borgpetersenii str. 200701203]
Length = 205
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 95/209 (45%), Gaps = 31/209 (14%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKK 62
+I + F+VFEG D SGK+T K L + L + IPS VNF + T TG + ++LR +
Sbjct: 2 KIEKPIFVVFEGIDGSGKSTLCKSLTEKLTERGIPS--VNFTEPTNFETGKYLRKFLRGE 59
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
I+L + F +R E + Q I SLE+ KN+ DRY +S
Sbjct: 60 IDLERKEQIDAFLNDREES-------LRQNIL-----PSLESGKNV----LLDRYMYSTA 103
Query: 123 AFSAAKEGMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTD 174
A+ + G D+ EK L K PD + LN E L +RK ER+E
Sbjct: 104 AYQS---GDDLLPETIIEKNLKKNFKIPDLLFYLDLNPAIALERLSQRKE-NKERFETLA 159
Query: 175 FQRKVAENYEKLKDNIWIDIDADKDIDTL 203
K+ Y+++ I ID K D +
Sbjct: 160 QLEKIRSAYDRILPKETIRIDGVKGPDEI 188
>gi|389580120|ref|ZP_10170147.1| thymidylate kinase [Desulfobacter postgatei 2ac9]
gi|389401755|gb|EIM63977.1| thymidylate kinase [Desulfobacter postgatei 2ac9]
Length = 209
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 34/189 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G F+VFEG D SGKTTQ + L L P P G +I L +
Sbjct: 6 KGRFVVFEGIDGSGKTTQVELLCKRLASTGFPIYTTCEPTDG-PVGRLIRRMLSGTLPAD 64
Query: 67 DQAAHLLFSANRWER----EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+ LF+A+R E E + ++++ G + DRY FS
Sbjct: 65 QRTIASLFAADRTEHLMDPETGIRQMVDTGTIV-----------------VCDRYYFSSY 107
Query: 123 AFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEE-ALQR----RKGFGDERYEQTD 174
A+ + + MD+ W Q + + KPD L ++ + L+R RK E YE+ D
Sbjct: 108 AYHS--QYMDMEWVIQANRLNADILKPDITLFIDVDPQICLKRLQTTRKHL--EIYEKID 163
Query: 175 FQRKVAENY 183
++V NY
Sbjct: 164 IMKQVRANY 172
>gi|414589778|tpg|DAA40349.1| TPA: hypothetical protein ZEAMMB73_168374 [Zea mays]
Length = 482
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 115 DRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE 157
DRYS+SGVAFSAAK G+DI WC PE GL PD V+ + E
Sbjct: 430 DRYSYSGVAFSAAK-GLDIEWCKAPENGLIAPDLVIYLDVQPE 471
>gi|317120927|ref|YP_004100930.1| thymidylate kinase [Thermaerobacter marianensis DSM 12885]
gi|315590907|gb|ADU50203.1| thymidylate kinase [Thermaerobacter marianensis DSM 12885]
Length = 238
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 85/201 (42%), Gaps = 26/201 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI EG + SGK+TQA ++D+L +P + V P T + + L
Sbjct: 26 RGWFISLEGGEGSGKSTQAAVVMDWLRSRGMPCRLVREPGGTPLGERLRELLLNGTGRPV 85
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
A LLF+A R +L+E I+ S L E + C DRY S +A+
Sbjct: 86 PVAEMLLFAAAR-------AQLVET----VILPSLLAGETVV---C--DRYVDSSLAYQG 129
Query: 127 AKEGMDISWCFQPEKGLPK---PDAVLLFKLNEE---ALQRRKGFGDERYEQTDFQRKVA 180
+ G+ + + + PD LLF E A RR G ER Q F R+V
Sbjct: 130 SGLGLGWEAVWSANRWATRGIMPDLTLLFDCPPELARARHRRPGDDIERRGQ-GFHRRVR 188
Query: 181 ENYEKLK---DNIWIDIDADK 198
E Y L N + IDA +
Sbjct: 189 EGYRALARAHGNRVVVIDASR 209
>gi|260435535|ref|ZP_05789505.1| thymidylate kinase [Synechococcus sp. WH 8109]
gi|260413409|gb|EEX06705.1| thymidylate kinase [Synechococcus sp. WH 8109]
Length = 209
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 36/213 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYL-NKNNIPSQFVNFPDR---TISTGHIIDEYLRKKI 63
G FIV EG D GKTTQ + L+++L N +P R G I E L
Sbjct: 3 GRFIVLEGIDGCGKTTQIQHLIEWLPNSGLMPKGAAVVCTREPGGTPLGRSIRELLLHTA 62
Query: 64 --ELPDQAAH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYS 118
E P A LL++A+R + TL + L++G +DR+S
Sbjct: 63 DQEAPAPTAELLLYAADRAQHVETLIR------------------PALERGDWVISDRFS 104
Query: 119 FSGVAFSAAKEGMDISWCFQPEK----GLPKPDAVLLFKLN-EEALQRRKGFGDERYEQ- 172
S +A+ G+D + E+ GL +PD L +L+ +E+LQRR G ++R E
Sbjct: 105 GSTLAYQGYGRGLDRDLIQRLERIATTGL-QPDLTLWLRLSVQESLQRRLGDKEDRIEAE 163
Query: 173 -TDFQRKVAENYEKL-KDNIWIDIDADKDIDTL 203
F +VA+ + +L + W + AD+ +
Sbjct: 164 GAAFLERVAQGFAELARQRSWCAVAADQSASAV 196
>gi|336121123|ref|YP_004575898.1| Thymidylate kinase [Methanothermococcus okinawensis IH1]
gi|334855644|gb|AEH06120.1| Thymidylate kinase [Methanothermococcus okinawensis IH1]
Length = 195
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 28/184 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D SGKTTQ+K L + +N ++ P G +I + L K + +
Sbjct: 5 FIVFEGIDGSGKTTQSKLLAEKIN-----GKYTCEPTNG-DIGKLIRDILSGK-KCEKET 57
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R E IEQ + K C DRY +S + + A +
Sbjct: 58 LALLFAADRVEHVVD----IEQHL------------KKTHIVC--DRYVYSSMVYQAI-Q 98
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKV-AENYEKLK 187
G+D+++ + KPD ++ ++ EE+ +R G E +E + KV A+ YE +K
Sbjct: 99 GIDLNFIMNINQFAKKPDILIFLDVDVEESFKRMNGKNKEIFENKEMLNKVRAKYYEIIK 158
Query: 188 DNIW 191
++
Sbjct: 159 KRLF 162
>gi|421109702|ref|ZP_15570215.1| dTMP kinase [Leptospira kirschneri str. H2]
gi|410005196|gb|EKO58994.1| dTMP kinase [Leptospira kirschneri str. H2]
Length = 204
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKKIELPDQ 68
F+VFEG D SGK+T + L + L + IPS V F + T + TG + ++LR +IEL +
Sbjct: 8 FVVFEGIDGSGKSTLCRSLTEELIELGIPS--VTFTEPTNLETGKYLRKFLRGEIELKKE 65
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
F +R E ++Q I + N D+ DRY +S A+ +
Sbjct: 66 EQIEAFLNDREES-------LKQNILPAL---------NSDKNVLLDRYMYSTAAYQS-- 107
Query: 129 EGMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTDFQRKVA 180
G D+S +K L + PD + L+ E L RRK ER+E K+
Sbjct: 108 -GDDLSPEMILKKNLNRNFKIPDLLFYLDLSPSIALERLNRRKE-EKERFETLAQLEKIR 165
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
YEK+ I I+ +K + + +I++ IK+
Sbjct: 166 SAYEKILPKDTIQINGNKKPNQIVQECLEILLTNIKR 202
>gi|215275164|sp|P0C8G2.1|KTHY_ASFWA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
Length = 239
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG I EG + GK+TQA +L L + + + FP+ +TG +I + L K IE+
Sbjct: 2 RGILIAIEGINGVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGDLILQVLNKMIEMS 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ H LF+ + E + L++ + + DRY +SG+A++
Sbjct: 62 SEQLHKLFTKHCSEFVAEIAALLKLNFIVIV-----------------DRYIWSGLAYAQ 104
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFK----LNEEALQRRKGFGDERYEQTDF 175
A +G+ I K KPD LNE+ L ++ F + ++T F
Sbjct: 105 A-DGITIE-----TKNTFKPDYTFFLSSKKPLNEKPLTLQRLFETKEKQETIF 151
>gi|302388610|ref|YP_003824431.1| thymidylate kinase [Thermosediminibacter oceani DSM 16646]
gi|302199238|gb|ADL06808.1| thymidylate kinase [Thermosediminibacter oceani DSM 16646]
Length = 211
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 96/221 (43%), Gaps = 47/221 (21%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST----GHIID 56
MA + +G FI EG D +GKTTQA+K+V YL R IST G +
Sbjct: 1 MARNLRKGKFITIEGPDGAGKTTQAEKIVQYLKSKG---------KRVISTREPGGTALG 51
Query: 57 EYLRKKIELPD-----QAAHLLFSANRWE-REPTLTKLIEQGITLEIMHSSLENEKNLDQ 110
E LRK + P+ A L+++A R + E + + +G T+
Sbjct: 52 EQLRKVLLDPEGSPVSNAEALIYAACRAQLLERMVIPALREGFTV--------------- 96
Query: 111 GCTNDRYSFSGVAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEE-ALQRRKGFG 166
DR+ S +A+ G+ I+ Q K G PD +L ++ +L R G
Sbjct: 97 --VCDRFVDSSLAYQGWARGIGINRILQLNKWVIGSYWPDITILLDVDPAVSLGRLVGGR 154
Query: 167 DERYEQ--TDFQRKVAENYEKLK----DNIWIDIDADKDID 201
+R E +F +KV E Y K++ D I I IDA + D
Sbjct: 155 KDRLESEALEFHQKVREGYMKVREMFPDRIRI-IDASQPAD 194
>gi|34499178|ref|NP_903393.1| thymidylate kinase [Chromobacterium violaceum ATCC 12472]
gi|46576426|sp|Q7NRQ7.1|KTHY_CHRVO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|34105029|gb|AAQ61385.1| dTMP kinase [Chromobacterium violaceum ATCC 12472]
Length = 212
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 84/194 (43%), Gaps = 31/194 (15%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M+S++ RG FI EG D +GK+T + D+L ++ + + F P G + E +R
Sbjct: 1 MSSEVRRGRFITLEGIDGAGKSTHLSFIRDWLARHGVDAAFTREPG-----GTPLSEKIR 55
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ P A L + E L Q E++ +L + L +DR++ S
Sbjct: 56 DLLLDPGTVASL-------DAEALLAFAARQQHIAEVIEPALAAGRWL----VSDRFTDS 104
Query: 121 GVAFSAAKEGMDIS-------WCFQPEKGLPKPDAVLLFKL-NEEALQRRKGFG-DERYE 171
AF G+ W ++GL +PD LLF L E A R G +R+E
Sbjct: 105 TYAFQGGGRGVPFERIRALEDWV---QRGL-QPDLTLLFDLPTEVAAGRMAGTRVPDRFE 160
Query: 172 Q--TDFQRKVAENY 183
Q DF R+V Y
Sbjct: 161 QEAADFHRRVRAAY 174
>gi|116328926|ref|YP_798646.1| thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|122283291|sp|Q04YY2.1|KTHY_LEPBL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|116121670|gb|ABJ79713.1| Thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
Length = 205
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 94/209 (44%), Gaps = 31/209 (14%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKK 62
+I + F+VFEG D SGK+T K L + L + IPS VNF + T TG + ++LR +
Sbjct: 2 KIEKPIFVVFEGIDGSGKSTLCKSLTEKLTERGIPS--VNFTEPTNFETGKYLRKFLRGE 59
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
I+L + F +R E + Q I SLE+ KN+ DRY +S
Sbjct: 60 IDLERKEQIDAFLNDREES-------LRQNIL-----PSLESGKNV----LLDRYMYSTA 103
Query: 123 AFSAAKEGMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTD 174
A+ + G D+ EK L K PD + LN E L +RK ER+E
Sbjct: 104 AYQS---GDDLLPETIIEKNLKKNFKIPDLLFYLDLNPAIALERLSQRKE-NKERFETLA 159
Query: 175 FQRKVAENYEKLKDNIWIDIDADKDIDTL 203
K+ Y ++ I ID K D +
Sbjct: 160 QLEKIRSAYNRILPKETIRIDGVKGPDEI 188
>gi|116330468|ref|YP_800186.1| thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|122281774|sp|Q04UJ2.1|KTHY_LEPBJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|116124157|gb|ABJ75428.1| Thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
Length = 205
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 94/209 (44%), Gaps = 31/209 (14%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKK 62
+I + F+VFEG D SGK+T K L + L + IPS VNF + T TG + ++LR +
Sbjct: 2 KIEKPIFVVFEGIDGSGKSTLCKSLTEKLTERGIPS--VNFTEPTNFETGKYLRKFLRGE 59
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
I+L + F +R E + Q I SLE+ KN+ DRY +S
Sbjct: 60 IDLERKEQIDAFLNDREES-------LRQNIL-----PSLESGKNV----LLDRYMYSTA 103
Query: 123 AFSAAKEGMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTD 174
A+ + G D+ EK L K PD + LN E L +RK ER+E
Sbjct: 104 AYQS---GDDLLPETIIEKNLKKNFKIPDLLFYLDLNPAIALERLSQRKE-NKERFETLA 159
Query: 175 FQRKVAENYEKLKDNIWIDIDADKDIDTL 203
K+ Y ++ I ID K D +
Sbjct: 160 QLEKIRSAYNRILPKETIRIDGVKGPDEI 188
>gi|302338530|ref|YP_003803736.1| thymidylate kinase [Spirochaeta smaragdinae DSM 11293]
gi|301635715|gb|ADK81142.1| thymidylate kinase [Spirochaeta smaragdinae DSM 11293]
Length = 206
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 19/191 (9%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M Q + VFEG D +G TTQA L D Q + F G +I + L
Sbjct: 1 MKEQKILSGYTVFEGLDGAGTTTQALLLADRCKLKGKAVQ-LTFEPTASEIGVVIRKVLA 59
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
++ + LF A+R+E L +G L ++ + DRY FS
Sbjct: 60 GQLPYHPETLARLFVADRYEH------LFGKGGILSLLDKHI--------AVIGDRYLFS 105
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER--YEQTDFQRK 178
+A+ + DI ++ P P+ ++ L E +RR D+R +E Q++
Sbjct: 106 SLAYQSLDVDFDI--VYEINSMFPLPERLIYIDLAPEECERRMSDRDQRDIFETLALQKR 163
Query: 179 VAENYEKLKDN 189
V E YE D
Sbjct: 164 VRERYEHTLDR 174
>gi|405373856|ref|ZP_11028515.1| Thymidylate kinase [Chondromyces apiculatus DSM 436]
gi|397087370|gb|EJJ18420.1| Thymidylate kinase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 222
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 85/211 (40%), Gaps = 34/211 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FIV EG D +G TTQ+++L L P G +I + L ++ LP
Sbjct: 14 GRFIVLEGLDGAGTTTQSERLAAALRAEGHSVLTTREPSDG-PVGTMIRQALTGRLGLPG 72
Query: 68 QAA-------HLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
A LLF+A+R + +T ++ + + L C DRY S
Sbjct: 73 GAGPLAPETLALLFAADRTDH-----------LTARVLPALAAGQIVL---C--DRYVLS 116
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR---KGFGDERYEQTDFQR 177
+A+ A MD W PD L + E RR +G E +E + QR
Sbjct: 117 SLAYQGATLPMD--WVEAVNACAVSPDLTLFVGVAPEVAARRRKARGGAAELFEADEAQR 174
Query: 178 KVAENY-----EKLKDNIWIDIDADKDIDTL 203
++A+ Y + K + ID ++ I+ +
Sbjct: 175 RIAKQYVAAIRRREKHERIVHIDGEQGIEAV 205
>gi|78213888|ref|YP_382667.1| thymidylate kinase [Synechococcus sp. CC9605]
gi|123577474|sp|Q3AH20.1|KTHY_SYNSC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|78198347|gb|ABB36112.1| Thymidylate kinase [Synechococcus sp. CC9605]
Length = 209
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 34/212 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYL-NKNNIPSQFVNFPDR---TISTGHIIDEYLRKKI 63
G FIV EG D GKTTQ + L+++L N +P R G I E L
Sbjct: 3 GRFIVLEGIDGCGKTTQIQHLLEWLPNSGLMPKGAAVVCTREPGGTPLGRSIRELLLHTS 62
Query: 64 --ELPDQAAHL-LFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYS 118
E P A L L++A+R + TL + L++G +DR+S
Sbjct: 63 DQEAPAPTAELMLYAADRAQHVETLIR------------------PALERGDWVISDRFS 104
Query: 119 FSGVAFSAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQ-- 172
S +A+ G+D I Q +PD L +L+ +E+LQRR G ++R E
Sbjct: 105 GSTLAYQGYGRGLDRDLIQRLEQIATAGLQPDITLWLRLSVQESLQRRLGDKEDRIEAEG 164
Query: 173 TDFQRKVAENYEKLKDN-IWIDIDADKDIDTL 203
F +VA+ + +L ++ W + AD+ +
Sbjct: 165 AAFLERVAQGFAQLAEHRSWCAVAADQSASAV 196
>gi|418676213|ref|ZP_13237497.1| dTMP kinase [Leptospira kirschneri serovar Grippotyphosa str. RM52]
gi|418685833|ref|ZP_13247005.1| dTMP kinase [Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|418740168|ref|ZP_13296547.1| dTMP kinase [Leptospira kirschneri serovar Valbuzzi str. 200702274]
gi|421088802|ref|ZP_15549622.1| dTMP kinase [Leptospira kirschneri str. 200802841]
gi|421129008|ref|ZP_15589218.1| dTMP kinase [Leptospira kirschneri str. 2008720114]
gi|400323359|gb|EJO71209.1| dTMP kinase [Leptospira kirschneri serovar Grippotyphosa str. RM52]
gi|410002490|gb|EKO53007.1| dTMP kinase [Leptospira kirschneri str. 200802841]
gi|410359712|gb|EKP06771.1| dTMP kinase [Leptospira kirschneri str. 2008720114]
gi|410739650|gb|EKQ84376.1| dTMP kinase [Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|410752511|gb|EKR09485.1| dTMP kinase [Leptospira kirschneri serovar Valbuzzi str. 200702274]
Length = 204
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKKIELPDQ 68
F+VFEG D SGK+T + L + L + IPS V F + T + TG + ++LR +IEL +
Sbjct: 8 FVVFEGIDGSGKSTLCRSLTEKLIELGIPS--VTFTEPTNLETGKYLRKFLRGEIELKKE 65
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
F +R E ++Q I + N D+ DRY +S A+ +
Sbjct: 66 EQIEAFLNDREES-------LKQNILPAL---------NSDKNVLLDRYMYSTAAYQS-- 107
Query: 129 EGMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTDFQRKVA 180
G D+S +K L + PD + L+ E L RRK ER+E K+
Sbjct: 108 -GDDLSPEMILKKNLNRNFKIPDLLFYLDLSPSIALERLNRRKE-DKERFETLAQLEKIR 165
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
YEK+ I I+ +K + +I++ IK+
Sbjct: 166 SAYEKILPKDTIQINGNKKPSQIVQECLEILLTNIKR 202
>gi|442321472|ref|YP_007361493.1| thymidylate kinase [Myxococcus stipitatus DSM 14675]
gi|441489114|gb|AGC45809.1| thymidylate kinase [Myxococcus stipitatus DSM 14675]
Length = 218
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 40/215 (18%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS---TGHIIDEYLRKKI 63
+G FIV EG D +G TTQ ++L L V R S G +I + L ++
Sbjct: 10 KGRFIVLEGLDGAGTTTQVERLASALRAEG----HVVVTTREPSDGPVGTMIRQALTGRL 65
Query: 64 ELPDQAA-------HLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDR 116
LP A LLF+A+R + + ++ + E + L C DR
Sbjct: 66 GLPHGAGPLTSETLALLFAADRTDH-----------LAARVLPALAEGKLVL---C--DR 109
Query: 117 YSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR---KGFGDERYEQT 173
Y S +A+ A + ++W PD L + E +R +G +E +E
Sbjct: 110 YVLSSLAYQGAS--LPMAWVEAINSHAVSPDLTLFVGVAPEVAAKRRAVRGGAEELFEAD 167
Query: 174 DFQRKVAENY-----EKLKDNIWIDIDADKDIDTL 203
+ QR++A+ Y + K + ID ++ I+ +
Sbjct: 168 EAQRRIAKQYLAAIRRRAKKERIVHIDGEQGIEAV 202
>gi|418694548|ref|ZP_13255585.1| dTMP kinase [Leptospira kirschneri str. H1]
gi|409957723|gb|EKO16627.1| dTMP kinase [Leptospira kirschneri str. H1]
Length = 204
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKKIELPDQ 68
F+VFEG D SGK+T + L + L + IPS V F + T + TG + ++LR +IEL +
Sbjct: 8 FVVFEGIDGSGKSTLCRSLTEELIELGIPS--VTFTEPTNLETGKYLRKFLRGEIELKKE 65
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
F +R E ++Q I + N D+ DRY +S A+ +
Sbjct: 66 EQIEAFLNDREES-------LKQNILPAL---------NSDKNVLLDRYMYSTAAYQS-- 107
Query: 129 EGMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTDFQRKVA 180
G D+S +K L + PD + L+ E L RRK ER+E K+
Sbjct: 108 -GDDLSPEMILKKNLNRNFKIPDLLFYLDLSPSIALERLNRRKE-DKERFETLAQLEKIR 165
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
YEK+ I I+ +K + +I++ IK+
Sbjct: 166 SAYEKILPKDTIQINGNKKPSQIVQECLEILLTNIKR 202
>gi|15679753|ref|NP_276871.1| thymidylate kinase [Methanothermobacter thermautotrophicus str.
Delta H]
gi|6016460|sp|O27793.1|KTHY_METTH RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|2622895|gb|AAB86231.1| thymidylate kinase [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 194
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 40/209 (19%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD-- 67
+I FEG D SGKTT A +L +N V P T I +R + PD
Sbjct: 2 YICFEGIDGSGKTTHAALTASWLRENGYMVHEVREP-----TDSNIGSLIRSMLSSPDAR 56
Query: 68 -----QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+ LLF+A+R TL IE +++ S DR +S +
Sbjct: 57 TPDVQRMLALLFAADRL----TLRSKIEGDWAEDVVVS--------------DRCYYSSM 98
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
+ +E W + + P+PD V+L ++ E R G DE +E + V E
Sbjct: 99 VYQGPEE-----WVCEINRFAPRPDVVILLDIDVEVAMERCGGTDE-FEDPLYLAGVRER 152
Query: 183 YEKLKD-NIWIDIDADKDIDTLGLIVKDI 210
Y +L D N + ++A++ ++ LI +DI
Sbjct: 153 YLELADKNGFYTVNAERGVN---LIQRDI 178
>gi|327399958|ref|YP_004340797.1| thymidylate kinase [Archaeoglobus veneficus SNP6]
gi|327315466|gb|AEA46082.1| Thymidylate kinase [Archaeoglobus veneficus SNP6]
Length = 190
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
I EG D GKTT AK L + L K + P + G I L K++ ++
Sbjct: 2 LIAIEGIDGVGKTTIAKFLKEELEKRGYEVVLLKEPTNS-EWGRKIKASLNKRLS-AEEE 59
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
L ++ E + ++QG + DRY +S +A+ AA+
Sbjct: 60 LELFILDRKYNVEHNILPALKQG-----------------KIVIMDRYYYSNIAYQAAR- 101
Query: 130 GMDISWCFQ-PEKGLPKPDAVLLFKLNEEALQRR---KGFGDERYEQTDFQRKVAENYEK 185
G+D + E+ P+PD V+L E R +G +E ++ +KV E ++
Sbjct: 102 GLDAERIKRINEEIAPRPDIVILLDAPPEICLERIMERGEIPNSFEDPEYLKKVREIFKS 161
Query: 186 LKDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
LKDN+ I +DA K ID + V IV++ I
Sbjct: 162 LKDNVVI-VDASKSIDEVKKDVLRIVLERI 190
>gi|320537300|ref|ZP_08037256.1| thymidylate kinase [Treponema phagedenis F0421]
gi|320145870|gb|EFW37530.1| thymidylate kinase [Treponema phagedenis F0421]
Length = 214
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKKIELPDQ 68
FIVFEG D +G T+Q + L + + V + T G +I + L K++ L +
Sbjct: 11 FIVFEGIDGTGTTSQLRLLRERFASIGKAEKVVFTQEPTDTEIGKLIRKALSKELSLEQK 70
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
LF+A+R E +IE H++ N K +DRY FS +A+
Sbjct: 71 TIAQLFAADRTEHIYGNAGIIE--------HTA--NGK----AVFSDRYFFSSLAYQGLS 116
Query: 129 EGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR---KGFGDERYEQTDFQR-------K 178
G ++ + P P+ + F + + R +G E YE+ DFQ +
Sbjct: 117 VGKSLAKKLNED--FPLPELLFFFDIPVQTSMSRIDKRGLQKEIYEKKDFQTAVRQEYLR 174
Query: 179 VAENYEKLKDNIW-IDIDADKDIDTL 203
+ E YEK + I IDA+KDI +
Sbjct: 175 IIEEYEKSAPEMQIIRIDAEKDIQEI 200
>gi|269986147|gb|EEZ92460.1| thymidylate kinase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 202
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G IV EG D +GK TQAK L + L ++PD + G I +L KKI+L
Sbjct: 3 GKLIVIEGIDGAGKATQAKILKEQLESQGKTVSVYSYPDYSSVYGERIKSFLYKKIDLKV 62
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+L+ + + + + I++G + I DR+ FS +A+ +A
Sbjct: 63 DELFMLYLIDMVKDRNRIIEDIKKGNDVLI-----------------DRFFFSTIAYQSA 105
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLN---EEALQRR---KGFGD-ERYEQTD-FQRKV 179
G + K L P ++F +N + ++QR+ KG D +++E F V
Sbjct: 106 G-GFSYETGKEFVKLLGMPPITVVFYINVPVDISMQRKEKQKGKMDVDKFESNKMFLSNV 164
Query: 180 AENYEKLK-DNI----WIDIDADKDIDTLGLIVKD 209
++ Y++LK +N W++ID K I+ + ++K+
Sbjct: 165 SKVYDQLKSENFYAKKWVEIDGSKSIEEISSLIKE 199
>gi|407004601|gb|EKE20944.1| Thymidylate kinase [uncultured bacterium]
Length = 240
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 38/238 (15%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST--GHIIDEYLRKK 62
+ +G FIV +G D SGK TQ K+LV L KN I + ++FP R + G I E L +
Sbjct: 1 MKKGKFIVVDGTDGSGKATQVKELVKNLRKNKIKVKTIDFP-RYYNNFFGKFIGECLVGE 59
Query: 63 ----IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
++L + A +L++A+R+E + K ++ G + D+ ++++
Sbjct: 60 NGNFVKLNPKLASVLYAADRFESSAQIKKWLDGGFNVI-----------ADRYVSSNQIH 108
Query: 119 FSGVAFSAAKEGMDISWCFQPEKG---LPKPDAVLLFK---------LNEEALQRRKGFG 166
G K ++W + E G LP+P+ ++ L++E QR+K +
Sbjct: 109 QGGKITDNKKRKDFLAWLEKMEFGIFKLPRPNVIIYLDVPVKITQELLSKEGSQRKKKYQ 168
Query: 167 DERYEQTDFQRKVAENYEK-----LKD-NIWIDIDADKD--IDTLGLIVKDIVIDTIK 216
+ + + + K E K LKD N W ID K+ + T+ I ++I+ +K
Sbjct: 169 NGKKDLVENDLKYLEKSRKSAIKMLKDNNNWSTIDCVKNGELKTIKEISQEILEKVLK 226
>gi|145590421|ref|YP_001152423.1| dTMP kinase [Pyrobaculum arsenaticum DSM 13514]
gi|145282189|gb|ABP49771.1| thymidylate kinase [Pyrobaculum arsenaticum DSM 13514]
Length = 196
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 28/179 (15%)
Query: 9 AFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQ 68
AF+V EG D SGK+T ++ L+K +P +V G +I E+ ++ +
Sbjct: 2 AFVVIEGIDGSGKST----VISLLSK-LLPRVYVTREPSASPIGRLIKEWALREGTADPR 56
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSA 126
LLF+A+R E H E E L +G +RY S +A+
Sbjct: 57 VDALLFAADRIE------------------HYKREIEPRLREGYIVICERYVESSIAYQG 98
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYEQTDFQRKVAENY 183
A G+ I + +PKPD ++ ++ E A+ R K G E+YEQ F ++V Y
Sbjct: 99 AA-GVPIEYIKFINSAVPKPDITVILDVDPEVAIARVKQRGTAEKYEQLSFLKRVRGIY 156
>gi|215275161|sp|P0C8F9.1|KTHY_ASFK5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
Length = 235
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG I EG + K+TQA +L + L +++FP TG +I + L K +++P
Sbjct: 2 RGILIAIEGINGVEKSTQAIRLKNALENKRYDVIYLHFPSPNTDTGKLILDVLNKIVKMP 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ H LF+ +R E + L++ L+ DRY +SG+A++
Sbjct: 62 SEQLHELFTKHRCEFTAEIAALLK-----------------LNYIVIVDRYIWSGLAYAQ 104
Query: 127 AKEGM-DISWCFQPEKG-LPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQR 177
A M D F P+ P+ LNE+ L ++ + E ++ F +
Sbjct: 105 ADRIMIDTKNTFNPDYTFFLSPNK----SLNEKPLHLQRLYETEEKQEIIFTQ 153
>gi|167957240|ref|ZP_02544314.1| thymidylate kinase [candidate division TM7 single-cell isolate
TM7c]
Length = 208
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE-- 64
RG +IV EG D +GK+TQ L +LNK S+ ++ P T I LRK I+
Sbjct: 2 RGKYIVIEGSDGTGKSTQIDLLKKFLNKKGFISKTIHEPGET-----AIGIELRKIIKNK 56
Query: 65 -LPDQAAH--LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
LP A LLF+A R E P +EN N + + R S
Sbjct: 57 NLPRSARTNLLLFTAARCELAPI-----------------IENHLNKGEWVISSRNWLST 99
Query: 122 VAFSAAKEGMDISWCFQ-----PEKGLPKPDAVLLFKLNEEALQRR-KGFGDERYEQT-- 173
V + EG+DI+ Q K + D L+ N + L+ R D+ Y T
Sbjct: 100 VVYQGYGEGIDINEIKQITALFTNKSYLQTDLTLVLYANTDTLRSRIINRNDKSYRDTFE 159
Query: 174 ----DFQRKVAENYEKL 186
+FQ K+ + Y+K+
Sbjct: 160 SKPDNFQCKLNKGYQKI 176
>gi|406885485|gb|EKD32670.1| Thymidylate kinase [uncultured bacterium]
Length = 223
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 105/246 (42%), Gaps = 61/246 (24%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFP--DRTISTGHIIDEYLRKKIELPD 67
IV EG D +GK+TQ L Y + ++++FP D + G +I +LR + D
Sbjct: 2 LIVLEGLDGAGKSTQINLLQKYFESSGAVVKYLHFPRFDSPV-FGDLIARFLRGDLGSID 60
Query: 68 QA----AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
Q LLF+ +R E + + +++G + + DRY +S +A
Sbjct: 61 QVHPYLIALLFAGDRREAGDMIREWLKEGYCVIL-----------------DRYLYSNIA 103
Query: 124 FSAAK-----EGMDI-SWCFQPEK---GLPKPDAVLLF---------KLNEEALQRRKGF 165
F AK E ++ W F E +PKPD L KLNE RKG
Sbjct: 104 FQCAKVKDLEEAENLRDWIFDTEYIKFAIPKPDLNLFLDVPLNFVHKKLNEN----RKG- 158
Query: 166 GDERYEQ---------TDFQRKVAENY--EKLKDNIWIDIDADKDIDTLGLIVKDIVIDT 214
GD Y Q +FQ KV + Y E +D ++ ID DI+ L DI +
Sbjct: 159 GDREYLQGKRDIHEASIEFQSKVRDRYLKECKRDTDFVRIDC-ADINGNMLPASDIF--S 215
Query: 215 IKKSQF 220
+ K+QF
Sbjct: 216 LIKNQF 221
>gi|147676397|ref|YP_001210612.1| thymidylate kinase [Pelotomaculum thermopropionicum SI]
gi|189030835|sp|A5D690.1|KTHY_PELTS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|146272494|dbj|BAF58243.1| thymidylate kinase [Pelotomaculum thermopropionicum SI]
Length = 216
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 80/190 (42%), Gaps = 27/190 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--E 64
+G FIVFEG D SGKTTQ K L + L P + P T G I E L + E
Sbjct: 2 KGKFIVFEGVDGSGKTTQIKLLGEKLESMGCPVVYTREPGGT-RVGERIREILLNPLYGE 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L A LL++A R Q + I+ + E + L C DR++ S +A+
Sbjct: 61 LVPWAEALLYAAAR-----------AQHVAQVILPALREGKVVL---C--DRFTDSSLAY 104
Query: 125 SAAKEGMDISWCFQ---PEKGLPKPDAVLLFKLNEEA---LQRRKGFGDERYEQ--TDFQ 176
G+DI Q P PD VL+ + E R G +R E+ +F
Sbjct: 105 QGYGRGVDIEMLEQVNRPAAAGVVPDLVLVLDFDREGQTERMARSGRSADRIEREAQEFY 164
Query: 177 RKVAENYEKL 186
R+V Y L
Sbjct: 165 RRVRSGYLAL 174
>gi|339319525|ref|YP_004679220.1| thymidylate kinase [Candidatus Midichloria mitochondrii IricVA]
gi|338225650|gb|AEI88534.1| thymidylate kinase [Candidatus Midichloria mitochondrii IricVA]
Length = 205
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 82/208 (39%), Gaps = 31/208 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI FEGCD SGKTTQ L ++L + P T I L+ +I+ P
Sbjct: 3 FITFEGCDGSGKTTQVSLLTNHLQSRGLKCVTTKEPGGTPLAQEIRSLLLKSEIKDPITE 62
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LL +A R + + QGIT+ DR+ S + + K+
Sbjct: 63 FALLSAARRDHITNLIQPSLVQGITV-----------------ICDRFFDSSLVYQGLKK 105
Query: 130 GMDISWCFQPEK---GLPKPDAVLLFKLNEEA----LQRRKGFGDERYEQ--TDFQRKVA 180
G+D+ + F K G +P L L E LQR Y+ F + +
Sbjct: 106 GLDLDFMFDIHKKVVGALEPSLTFLLDLAPEIIIERLQRSANREINHYDAQPVSFHKSIR 165
Query: 181 ENY----EKLKDNIWIDIDADKDIDTLG 204
E + EK I + I+AD+ I+ +
Sbjct: 166 EGFLLLAEKFSSRIVV-INADQPIENIA 192
>gi|347754801|ref|YP_004862365.1| thymidylate kinase [Candidatus Chloracidobacterium thermophilum B]
gi|347587319|gb|AEP11849.1| thymidylate kinase [Candidatus Chloracidobacterium thermophilum B]
Length = 218
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 94/224 (41%), Gaps = 40/224 (17%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR----- 60
PRG FI FEG D SGKTTQ K+LV L + +P + P G + YLR
Sbjct: 8 PRGKFISFEGIDGSGKTTQVKRLVAALQRAAVPVIHTHEPG-----GTPLGRYLRQVLLD 62
Query: 61 -KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
++ +A LLF+A+R E T +I +T Q DR++
Sbjct: 63 TRETAPTTRAEILLFAADRAEHVET---VIRPALT-------------AGQIVVCDRFAD 106
Query: 120 SGVAFSAAKEGMDISWCFQ----PEKGLPKPDAVLLFKLN-EEALQ--RRKGFGDERYEQ 172
S A+ + M Q +GL +PD L L E A+Q R++G R+E
Sbjct: 107 STRAYQGSGRRMSAEVIEQSLQLATQGL-EPDLTFLLDLPVEMAVQRLRQRGAPAHRFEA 165
Query: 173 T--DFQRKVAENYEKLKDNIWID---IDADKDIDTLGLIVKDIV 211
+F +V + L + IDA++ D + + +V
Sbjct: 166 AGLEFYHRVRAGFLALAEQYPTRIRVIDANRSPDEVHTAIWQVV 209
>gi|297171025|gb|ADI22039.1| thymidylate kinase [uncultured myxobacterium HF0200_05J13]
Length = 199
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI EG D SG TTQ ++ + L K P R G I + LR + + P +
Sbjct: 6 FIALEGIDGSGTTTQLTRIAEALTKRGRVVTQTMEPSRG-PIGTRIRDILRGEEKTPPDS 64
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSAA 127
LLF+A+R + H E L +G +DRY S +A+ +
Sbjct: 65 LALLFAADRLD------------------HLQREIAPALQRGEVVLSDRYLISSLAYQSL 106
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQRRKGFGDER--YEQTDFQRKVAENYE 184
+++ + KPD +L K+ EEA +RR G E ++ D Q K+++ Y+
Sbjct: 107 H--VELPFIEMINARARKPDVSILLKICPEEAAKRRATRGGEAEIFDDLDLQEKISQAYD 164
Query: 185 K 185
K
Sbjct: 165 K 165
>gi|257784894|ref|YP_003180111.1| thymidylate kinase [Atopobium parvulum DSM 20469]
gi|257473401|gb|ACV51520.1| thymidylate kinase [Atopobium parvulum DSM 20469]
Length = 219
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 93/224 (41%), Gaps = 28/224 (12%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR-K 61
++ +G FI EG D GK+TQA L + L N FV P T + I D L K
Sbjct: 5 TRTSQGLFITLEGVDGCGKSTQASLLREDLKALNFDVVFVREPGGTAISEQIRDVVLNPK 64
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+ D+ LL+ A+R +L+E E++ +L + K + DR+ S
Sbjct: 65 NGAMCDECELLLYEASR-------AQLVE-----EVIRPALASGKVV----LCDRFYDST 108
Query: 122 VAFSAAKEGMDISWCFQPEK----GLPKPDAVLLFKLNEEALQRRKGFGDE---RYEQTD 174
A+ AA G+D + G+ PD L+F L R D E
Sbjct: 109 YAYQAAGRGLDTDLVHHANRLGSCGV-SPDRTLVFMLEPTVAHARATQNDTDRLEAEGVA 167
Query: 175 FQRKVAENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
FQ +V Y++L + IDAD ID + + ++ D I
Sbjct: 168 FQERVFAGYKQLLQDEPERVKAIDADGSIDEVRTRTRQLLADLI 211
>gi|218294864|ref|ZP_03495718.1| dTMP kinase [Thermus aquaticus Y51MC23]
gi|218244772|gb|EED11296.1| dTMP kinase [Thermus aquaticus Y51MC23]
Length = 201
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 28/205 (13%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KIELP 66
G F+ EG D SGK+TQAK L +L +P P + + D L K L
Sbjct: 3 GLFLTLEGLDGSGKSTQAKLLAAFLEGRGLPVVLTREPGGGLPG--VRDLLLNPLKGPLS 60
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+A +LL SA+R E +++ SLE +DRY S +A+
Sbjct: 61 PEAEYLLLSADRAEH------------VRKVILPSLEA----GAWVVSDRYLDSSLAYQG 104
Query: 127 AKEGMDISWCFQPEK----GLPKPDAVLLFKL-NEEALQRRKGFGDERYEQTDFQRKVAE 181
G+ + W + K GL P L L EEAL+R K E F ++V E
Sbjct: 105 FGRGLPLPWLLEVAKEATLGL-TPRLTFLLDLPPEEALRRVKDPDRLEREGLAFFQRVRE 163
Query: 182 NY---EKLKDNIWIDIDADKDIDTL 203
Y K + + ++ +DA + ++ +
Sbjct: 164 GYLFLAKEEPHRFVVLDATESVEAV 188
>gi|172036089|ref|YP_001802590.1| putative thymidylate kinase [Cyanothece sp. ATCC 51142]
gi|354552892|ref|ZP_08972199.1| thymidylate kinase [Cyanothece sp. ATCC 51472]
gi|171697543|gb|ACB50524.1| putative thymidylate kinase [Cyanothece sp. ATCC 51142]
gi|353554722|gb|EHC24111.1| thymidylate kinase [Cyanothece sp. ATCC 51472]
Length = 208
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 46/197 (23%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTI----STGHIIDEYLRKKIEL 65
FIV EG D++GKTTQA++L YL +N D I T +I E +RK ++
Sbjct: 5 FIVLEGIDKAGKTTQAERLKRYL---------INQGDSAIISSEPTEGVIGELIRKAMQS 55
Query: 66 P----------DQAAHLLFSANR----WEREPTLTKLIEQGITLEIMHSSLENEKNLDQG 111
P DQ LF+A+R + + KLI+Q
Sbjct: 56 PVFKINDKAKFDQQMAYLFAADRHYHLYNEVDGVYKLIQQD----------------HYH 99
Query: 112 CTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ER 169
RY FS +A+++ + + ++ + K P PD V+ + + AL R + D E
Sbjct: 100 VIATRYYFSSLAYNSNNQE-EFNFVYGLNKRFPNPDLVIYLDIPLDIALSRLENTHDKEV 158
Query: 170 YEQTDFQRKVAENYEKL 186
YE + ++V +NY+++
Sbjct: 159 YETKEKLQQVQDNYQQI 175
>gi|9628143|ref|NP_042729.1| thymidylate kinase [African swine fever virus]
gi|1170718|sp|P42490.1|KTHY_ASFB7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|402550|emb|CAA79604.1| thymidylate kinase [African swine fever virus]
gi|780405|gb|AAA65265.1| thymidylate kinase [African swine fever virus]
gi|162849246|emb|CAN10134.1| Thymidylate kinase [African swine fever virus Benin 97/1]
gi|162849418|emb|CAN10383.1| Thymidylate kinase [African swine fever virus OURT 88/3]
gi|291289479|emb|CBH29136.1| BA71V-A240L [African swine fever virus E75]
gi|1097424|prf||2113434AH thymidylate kinase
Length = 240
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG I EG + GK+TQA +L L + + + FP+ +TG +I + L K E+
Sbjct: 2 RGILITIEGINGVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGGLILQVLNKMTEMS 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ H LF+ + E + L++ + + D Y +SG+A++
Sbjct: 62 SEQLHKLFTKHHSEFSAEIAALLKLNFIVIV-----------------DHYIWSGLAYAQ 104
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFK----LNEEALQRRKGFGDERYEQTDF 175
A +G+ I K + KPD LNE+ L ++ F + ++T F
Sbjct: 105 A-DGITIE-----TKNIFKPDYTFFLSSKKPLNEKPLTLQRLFETKEKQETIF 151
>gi|409990422|ref|ZP_11273797.1| thymidylate kinase [Arthrospira platensis str. Paraca]
gi|291571445|dbj|BAI93717.1| thymidylate kinase [Arthrospira platensis NIES-39]
gi|409938710|gb|EKN79999.1| thymidylate kinase [Arthrospira platensis str. Paraca]
Length = 231
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 42/229 (18%)
Query: 8 GAFIVFEGCDRSGKTTQAKK----LVDYLNKNNIPS--------QFVNFPDRTISTGHII 55
G IVFEG + GKTTQ ++ L D L+ N+ P Q P T H+
Sbjct: 3 GKLIVFEGIEGCGKTTQIQQIQPWLADRLSLNHSPGGKLHQPGVQVTREPGGTQLGQHLR 62
Query: 56 DEYLRKKIELP--DQAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGC 112
D L +I P D++ LL++A+R + TL K L++QG +
Sbjct: 63 DLLLHHEINEPLSDRSELLLYAADRAQHIETLIKPLLDQGTMI----------------- 105
Query: 113 TNDRYSFSGVAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEA-LQRRKGFGD- 167
DR++ S +A+ G+D+ Q + G PD L + EA L R K
Sbjct: 106 LCDRFTDSTLAYQGYGRGLDLQQIHQINQIATGGLVPDLTLWLNVPVEAGLTRIKARKKA 165
Query: 168 ERYEQTD--FQRKVAENY---EKLKDNIWIDIDADKDIDTLGLIVKDIV 211
+R EQ D F +VAE + K+ + ID + D D + +++I+
Sbjct: 166 DRIEQADLEFHYRVAEGFATLAKMYPQRIVPIDGNGDRDRVTQQIQNIL 214
>gi|325290200|ref|YP_004266381.1| thymidylate kinase [Syntrophobotulus glycolicus DSM 8271]
gi|324965601|gb|ADY56380.1| Thymidylate kinase [Syntrophobotulus glycolicus DSM 8271]
Length = 210
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 26/194 (13%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYL-NKNNIPSQFVNFPDRTISTGHIIDEYL 59
M +Q G FIV EG D SG +TQ+ L Y+ NK+ P G +I + L
Sbjct: 1 MQTQQFSGKFIVLEGTDGSGISTQSALLKRYIENKHGKKVLLAKEPSEG-PIGTLIRQVL 59
Query: 60 RKKIE-LPDQAAHLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
+++ + +++ L+F+A+R + + + +EQG + DRY
Sbjct: 60 THRVQGIREESLTLMFAADRMDHLQHKIIPALEQGALV-----------------ICDRY 102
Query: 118 SFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQ---RRKGFGDERYEQTD 174
+S A+ K +D W + K KPD + K+ + R+ F + +EQ
Sbjct: 103 VWSSFAYQGIK--IDEQWILETNKYALKPDLTIFVKVRPQVSMERIRQNRFQIDVFEQEV 160
Query: 175 FQRKVAENYEKLKD 188
++V NY K+K+
Sbjct: 161 ILKEVMANYIKIKE 174
>gi|108758316|ref|YP_631609.1| thymidylate kinase [Myxococcus xanthus DK 1622]
gi|50404253|gb|AAT76867.1| serine/threonine kinase Pkn2 associate protein 1 [Myxococcus
xanthus]
gi|108462196|gb|ABF87381.1| thymidylate kinase [Myxococcus xanthus DK 1622]
Length = 221
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 34/211 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FIV EG D +G TTQ ++L L P G +I + L ++ LP
Sbjct: 14 GRFIVLEGLDGAGTTTQVERLAAALRAEGHSVLTTREPSDG-PVGTMIRQALTGRLGLPG 72
Query: 68 QAA-------HLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
A LLF+A+R + +T ++ + + L C DRY S
Sbjct: 73 GAGPLAPETLALLFAADRTDH-----------LTARVLPALAAGQIVL---C--DRYVLS 116
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR---KGFGDERYEQTDFQR 177
+A+ A + + W PD L + E RR +G E +E + QR
Sbjct: 117 SLAYQGAS--LPMEWVEAVNACAVSPDLTLFVGVAPEVAARRRKARGGAAELFEADEAQR 174
Query: 178 KVAENY-----EKLKDNIWIDIDADKDIDTL 203
++A+ Y + K + ID ++ I+ +
Sbjct: 175 RIAKQYVAAIRRREKHERIVHIDGEQGIEAV 205
>gi|398341265|ref|ZP_10525968.1| thymidylate kinase [Leptospira kirschneri serovar Bim str. 1051]
Length = 204
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKKIELPDQ 68
F+VFEG D SGK+T + L + L + IP V F + T + TG + ++LR +IEL +
Sbjct: 8 FVVFEGIDGSGKSTLCRSLTEKLIELGIPC--VTFTEPTNLETGKYLRKFLRGEIELKKE 65
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
F +R E ++Q I + N D+ DRY +S A+ +
Sbjct: 66 EQIEAFLNDREES-------LKQNILPAL---------NSDKNVLLDRYMYSTAAYQS-- 107
Query: 129 EGMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRKGFGDERYEQTDFQRKVA 180
G D+S +K L + PD + L+ E L RRK ER+E K+
Sbjct: 108 -GDDLSPEMILKKNLNRNFKIPDLLFYLDLSPSIALERLNRRKE-DKERFETLAQLEKIR 165
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
YEK+ I I+ +K + + +I++ IK+
Sbjct: 166 SAYEKILPKDTIQINGNKKPNQIVQECLEILLTNIKR 202
>gi|359687822|ref|ZP_09257823.1| thymidylate kinase [Leptospira licerasiae serovar Varillal str.
MMD0835]
gi|418751457|ref|ZP_13307743.1| dTMP kinase [Leptospira licerasiae str. MMD4847]
gi|418758643|ref|ZP_13314825.1| dTMP kinase [Leptospira licerasiae serovar Varillal str. VAR 010]
gi|384114545|gb|EIE00808.1| dTMP kinase [Leptospira licerasiae serovar Varillal str. VAR 010]
gi|404274060|gb|EJZ41380.1| dTMP kinase [Leptospira licerasiae str. MMD4847]
Length = 197
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 31/202 (15%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+QIP F VFEG D SGK+T + +++D L ++P+ P R +G + ++L +
Sbjct: 2 AQIP--GFYVFEGLDGSGKSTLSVRVLDLLASKHVPAICFAEPTR-YESGLYLRKFLSGE 58
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
IEL + A +RE +L + I SL +K + DRY +S
Sbjct: 59 IELSPEKQ---IEAFLEDREVSLNRNI---------LPSLSQKKIV----LLDRYMYSTA 102
Query: 123 A-----FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKG--FGDERYEQTD 174
A F +AKE + + ++G P+P+ V ++ EEAL R KG +R+E
Sbjct: 103 AYQSGDFFSAKEILKKNL----DRGFPEPEKVFYLEIEPEEALARLKGRDTTKDRFETIS 158
Query: 175 FQRKVAENYEKLKDNIWIDIDA 196
K+ + YE++ + +DA
Sbjct: 159 ALTKIKKAYEEILPENTVRLDA 180
>gi|332298218|ref|YP_004440140.1| thymidylate kinase [Treponema brennaborense DSM 12168]
gi|332181321|gb|AEE17009.1| Thymidylate kinase [Treponema brennaborense DSM 12168]
Length = 208
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 33/185 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDR--TISTGHIIDEYLRKKIELPD 67
FIVFEG D SG +TQ L KN +P+ F +++TG + LR L
Sbjct: 6 FIVFEGIDGSGTSTQIALL-----KNKLPNPGTLFTAEPTSLATGRFLRTLLRGDERLTP 60
Query: 68 QAAHLLFSANRWE----REPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
LF+A+R+E ++ L + GI + +DRY FS +A
Sbjct: 61 GTMAYLFAADRYEHVHAQDGILQTCADGGIVV------------------SDRYFFSSLA 102
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFG-DERYEQTDFQRKVAE 181
+ +A+ G ++ + + P P+ + F + +L R G E YE+ +F K A
Sbjct: 103 YQSAECGRELPA--KLNESFPLPEYLFYFDIEPSVSLNRITGRSVTEIYEKREFLEKTAA 160
Query: 182 NYEKL 186
YE++
Sbjct: 161 EYERI 165
>gi|432328497|ref|YP_007246641.1| thymidylate kinase [Aciduliprofundum sp. MAR08-339]
gi|432135206|gb|AGB04475.1| thymidylate kinase [Aciduliprofundum sp. MAR08-339]
Length = 202
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 49/220 (22%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL---P 66
FIV EG D SGK+T AK L DYL + P +T + E +R+ IE P
Sbjct: 2 FIVLEGIDGSGKSTIAKMLADYLGERGKKVYLTEEPTKT-----WLGEAVRRGIEEEKNP 56
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
A LLF A+R E + + IE+G +DRY +S A+
Sbjct: 57 YTQA-LLFFADRAEHVMEIKRKIEEGYV-----------------VISDRYVYSTYAYQG 98
Query: 127 AK-EGM-----DISW---CFQPEKGLPKPDAVLLFKLNEEALQRRKGFGD-----ERYEQ 172
A+ G+ I W ++P + PD V+L K++ R GF + E++E+
Sbjct: 99 AQLYGILRLEDAIEWFNKVYEPMR--LDPDVVILLKIDP---ARGLGFVNTRDFREKFER 153
Query: 173 TDFQRKVAENYEKL-KDNIWIDIDADKDIDTLGLIVKDIV 211
+F +V E Y+ L + + + +D+++ I+ + +D+V
Sbjct: 154 EEFLNRVQEIYDLLAQSHGFYVVDSNRQIEK---VFEDVV 190
>gi|406909095|gb|EKD49424.1| Thymidylate kinase [uncultured bacterium]
Length = 229
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 80/184 (43%), Gaps = 33/184 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDR-TISTGHIIDEYLRKKIEL 65
+G IV EG D SGKTTQ K L+ L + + ++FP T G +ID YL +
Sbjct: 8 KGKLIVIEGTDGSGKTTQFKLLIKRLKEEGFKTSSMSFPRHNTPFFGLLIDRYLNNEFGK 67
Query: 66 PDQA----AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
D+ A +L++A+RWE + ++MHS L + DRY S
Sbjct: 68 ADEVSPYLASVLYAADRWE------------VRDKLMHSL-----KLGKIVVLDRYVESN 110
Query: 122 VAFSAAKEGMDISWCFQPEKGL----------PKPDAVLLFKLNEEALQRRKGFGDERYE 171
+ K D+S + K L PKPD V+ + + R G ++Y+
Sbjct: 111 LGHQGGKI-QDVSKRKKLLKWLGDLDYKVFKNPKPDLVIYLSVPSKFSVRLAGKLSKKYK 169
Query: 172 QTDF 175
+T +
Sbjct: 170 KTSY 173
>gi|260893950|ref|YP_003240047.1| thymidylate kinase [Ammonifex degensii KC4]
gi|260866091|gb|ACX53197.1| thymidylate kinase [Ammonifex degensii KC4]
Length = 202
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 79/184 (42%), Gaps = 31/184 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FIV EG D GKTTQA+ L L + V P T G I E L+K+ EL
Sbjct: 2 RGFFIVLEGIDGVGKTTQARILAQKLREQGREVVEVREPGGT-RLGEAIRELLQKE-ELA 59
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
A LF A+R +L+E E++ +L K + DR+S S +A+
Sbjct: 60 PWAEACLFLASR-------AQLVE-----EVIKPALAKGKVV----VGDRFSLSTLAYQG 103
Query: 127 A------KEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKV 179
A K SW G +PD L+ L EEAL R G GD R E V
Sbjct: 104 ALGLEPDKLAQLNSWV----TGGLEPDLTLVIDLKAEEALAR--GKGDLREEIRQKLEIV 157
Query: 180 AENY 183
E Y
Sbjct: 158 RERY 161
>gi|338534607|ref|YP_004667941.1| thymidylate kinase [Myxococcus fulvus HW-1]
gi|337260703|gb|AEI66863.1| thymidylate kinase [Myxococcus fulvus HW-1]
Length = 224
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 36/215 (16%)
Query: 6 PR--GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI 63
PR G F+V EG D +G TTQ ++L L P G +I + L ++
Sbjct: 13 PRAPGRFVVLEGLDGAGTTTQVERLAAALRAEGHAVVTTREPSDG-PVGTMIRQALTGRL 71
Query: 64 ELPDQAA-------HLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDR 116
LP A LLF+A+R + +T ++ + + L C DR
Sbjct: 72 GLPHGAGPLAPETLALLFAADRTDH-----------LTARVLPALAAGQIVL---C--DR 115
Query: 117 YSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR---KGFGDERYEQT 173
Y S +A+ A + ++W PD L + E RR +G E +E
Sbjct: 116 YVLSSLAYQGAS--LPMAWVEAVNACAVSPDLTLFVGVAPEVAARRRKARGGAAELFEAD 173
Query: 174 DFQRKVAENYE-----KLKDNIWIDIDADKDIDTL 203
+ QR++A+ Y + K + ID ++ I+ +
Sbjct: 174 EAQRRIAKQYVAAIRLREKHERIVHIDGEQGIEAV 208
>gi|357040041|ref|ZP_09101831.1| Thymidylate kinase [Desulfotomaculum gibsoniae DSM 7213]
gi|355357021|gb|EHG04800.1| Thymidylate kinase [Desulfotomaculum gibsoniae DSM 7213]
Length = 205
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 42/193 (21%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FIVFEG D +GKTTQ + L + + +P P T G R + L D
Sbjct: 4 GKFIVFEGIDGAGKTTQMELLAGFFKRKGMPVLCTREPGGTRIGG-------RLRNLLLD 56
Query: 68 QAAH--------LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRY 117
A H +L++A+R + EI+ + LD+G T DR+
Sbjct: 57 PACHDINHRTEAILYAADRAQH------------VYEIIRPA------LDRGITVLCDRF 98
Query: 118 SFSGVAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLN-EEALQRRKG-FGDERY-- 170
+S +A+ GMD++ Q + G PDAV+L + E ++R G +R
Sbjct: 99 VYSTLAYQGWGRGMDMALLLQLNELATGGLLPDAVVLLDIAVPEGMRRVMGQRSPDRLEG 158
Query: 171 EQTDFQRKVAENY 183
E+ F R+V E Y
Sbjct: 159 EKHVFFRRVREGY 171
>gi|220932870|ref|YP_002509778.1| dTMP kinase [Halothermothrix orenii H 168]
gi|254808299|sp|B8CZT1.1|KTHY_HALOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|219994180|gb|ACL70783.1| dTMP kinase [Halothermothrix orenii H 168]
Length = 207
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 39/209 (18%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI EG + SGK+TQ + L L K+ P G I + +RK + P
Sbjct: 2 RGLFITLEGIEGSGKSTQIEMLYKRLKKDGFDVIITREP-----GGTPIGKEIRKLLLDP 56
Query: 67 D-----QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
D +A LL++A+R + +E++ +LE+ K + DR+ S
Sbjct: 57 DNIMGAKAEFLLYAADRAQH------------VVELIKPALESGKVV----LADRFIDSS 100
Query: 122 VAFSAAKEGMDISWCFQPEKGLPK---PDAVLLFKLN-EEALQRRKGF-----GD--ERY 170
+A+ G+DI + + PD + L+ E+ L+R +G+ GD ER
Sbjct: 101 IAYQGYGRGLDIDVVKTVNEWVIDGCWPDLTFVLDLDVEKGLERARGYSPDNQGDRLER- 159
Query: 171 EQTDFQRKVAENYEKL-KDNIWIDIDADK 198
E F R+V + Y +L +D +I +DAD+
Sbjct: 160 ELVTFHRRVRQAYHQLAEDRRFIMLDADR 188
>gi|18312312|ref|NP_558979.1| thymidylate kinase [Pyrobaculum aerophilum str. IM2]
gi|23821790|sp|Q8ZY35.1|KTHY_PYRAE RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|18159759|gb|AAL63161.1| thymidylate kinase (tmk) [Pyrobaculum aerophilum str. IM2]
Length = 192
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 31/214 (14%)
Query: 9 AFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQ 68
AF+ EG D SGK+T V L + +P + + G +I E+ K +
Sbjct: 2 AFVAIEGIDGSGKST-----VISLLEKKLPRVYATREPSSGPIGRLIKEWALKGGSVDPH 56
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSA 126
LLF+A+R E H E E + +G ++RY S +A+
Sbjct: 57 VDALLFAADRIE------------------HYKREIEPRVREGYIVISERYIESSIAYQG 98
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLN---EEALQRRKGFGDERYEQTDFQRKVAENY 183
A G+ + +PKPD ++ ++ EA R++G G E+YE F RKV E Y
Sbjct: 99 AA-GVSREFVKYINSLVPKPDLTIILDVDPSIAEARIRQRG-GAEKYEYLSFLRKVREIY 156
Query: 184 -EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
+ + + IDA + + + V +++ ++
Sbjct: 157 LARAAEEGYPVIDASRRPEEVAADVAELIKRVVR 190
>gi|149037471|gb|EDL91902.1| deoxythymidylate kinase (predicted), isoform CRA_d [Rattus
norvegicus]
Length = 126
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 133 ISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL---KDN 189
+ WC QP+ GLPKPD +L +L R FG ERYE FQ +V +++L K+
Sbjct: 28 LDWCKQPDVGLPKPDLILFLQLQLLDAASRGEFGLERYETGTFQEQVLLCFQQLMSEKNL 87
Query: 190 IWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLE 224
W +DA K I+ + ++ + D I+ + PLE
Sbjct: 88 NWKVVDASKSIEDVHEEIRALSEDAIQNAAQRPLE 122
>gi|188584675|ref|YP_001916220.1| dTMP kinase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349362|gb|ACB83632.1| dTMP kinase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 206
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 91/220 (41%), Gaps = 33/220 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR--KKIE 64
RG FI FEG D GK+TQ KK+ L K P T S G I E L K
Sbjct: 4 RGKFITFEGIDGCGKSTQLKKVTSKLKKLGFNVVSTREPGGT-SVGDAIREILLAPKHYN 62
Query: 65 LPDQAAHLLFSANRWER--EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+ + LL++A+R + E + L E I L C DR+ S V
Sbjct: 63 MTIETEALLYAASRVQHIEEFIIPNLAEDNIVL----------------C--DRFVDSSV 104
Query: 123 AFSAAKEGM-DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ--TDFQRKV 179
A+ K ++ QP PD L + E +R G +R E ++Q +V
Sbjct: 105 AYQGIKLSHEEVIRVNQPAYDKVTPDITFLIDITPERAAKRLGIEKDRIENRGVNYQSQV 164
Query: 180 AENY----EKLKDNIWI---DIDADKDIDTLGLIVKDIVI 212
ENY E+ D I I D +K + L +++DI+I
Sbjct: 165 RENYLFLAEEEPDRIVIINGDQSEEKVFEELWNVLEDILI 204
>gi|309775015|ref|ZP_07670030.1| dTMP kinase [Erysipelotrichaceae bacterium 3_1_53]
gi|308917233|gb|EFP62958.1| dTMP kinase [Erysipelotrichaceae bacterium 3_1_53]
Length = 210
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 92/218 (42%), Gaps = 47/218 (21%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FI FEG D SGKTT +K + L + P + P G I E +RK I P
Sbjct: 3 KGLFITFEGNDGSGKTTISKLAYERLKEMGYPVIYTREPG-----GIDIAEQIRKVILDP 57
Query: 67 DQAAH------LLFSANRWER--EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
A LL++A+R + E L L E I L C DR+
Sbjct: 58 ANTAMDERCEALLYAASRRQHLVEKVLPALNEGSIVL----------------C--DRFV 99
Query: 119 FSGVAFSAAKEGMDISWC-----FQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERY-- 170
S + + G+ + F E L PDA + ++ E L R G++
Sbjct: 100 DSSLVYQGIARGIGMEEVYAINQFAIEGHL--PDATIFLSVDFETGLSRVTSRGNKDRLD 157
Query: 171 -EQTDFQRKVAENY----EKLKDNIWIDIDADKDIDTL 203
E +F + VA+ Y EK KD + I +DA+ D+DT+
Sbjct: 158 NESMEFHKLVAQGYELIKEKFKDRMHI-VDANADVDTV 194
>gi|21227213|ref|NP_633135.1| thymidylate kinase [Methanosarcina mazei Go1]
gi|23821771|sp|Q8PXV5.1|KTHY_METMA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|20905554|gb|AAM30807.1| Thymidylate kinase [Methanosarcina mazei Go1]
Length = 206
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 21/182 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG I EG D SGK+T AKK+ + F P R TG ++ ++ +
Sbjct: 2 RGKLITLEGIDGSGKSTVAKKIQENPEIQVFDPVFTREPTRGTLTGTAVENAIQSET--- 58
Query: 67 DQAAHL-LFSANRWEREPTLTKLIEQGITLEIMHSSLENEKN-LDQGCTNDRYSFSGVAF 124
DQ A L LF+A+ E L KL++ +L N KN + ++ RY++ GV
Sbjct: 59 DQLAELFLFTADHAEH---LAKLVK---------PALANGKNVISDRYSDSRYAYQGVTL 106
Query: 125 SAAKEGMDISWCFQPEKGLP-KPDAVLLFKLNEEALQRRKGFGDE--RYEQTDFQRKVAE 181
+ E + W G PD LF + E R G E ++E+ +F + V E
Sbjct: 107 KSRFEN-PLEWVRSLHSGWTVVPDLTFLFDIEPEIAVERCGKRGEQTKFEKIEFLQNVRE 165
Query: 182 NY 183
N+
Sbjct: 166 NF 167
>gi|167768112|ref|ZP_02440165.1| hypothetical protein CLOSS21_02667 [Clostridium sp. SS2/1]
gi|317499447|ref|ZP_07957714.1| thymidylate kinase [Lachnospiraceae bacterium 5_1_63FAA]
gi|167709636|gb|EDS20215.1| dTMP kinase [Clostridium sp. SS2/1]
gi|291559963|emb|CBL38763.1| thymidylate kinase [butyrate-producing bacterium SSC/2]
gi|316893319|gb|EFV15534.1| thymidylate kinase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 208
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 24/187 (12%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI-ELP 66
G F+ EG D +GKTTQ + L DYL+ P T + + + L K+ E+
Sbjct: 2 GLFLTVEGPDGAGKTTQIELLRDYLSDKGYDIIVCREPGGTPISEAVRNVILNKEFTEMG 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
LL++A R +LIE E++ +LE+ K + DR+ S +
Sbjct: 62 HMTELLLYAAAR-------AQLIE-----EVIRPALEDGKIV----ICDRFVESSAVYQG 105
Query: 127 AKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRKGFGDE----RYEQTDFQRKV 179
GM I ++ + G PD ++ L+ EA RK E E DF +KV
Sbjct: 106 IARGMGIDLVYKVNQFAIGDTMPDLTIMIDLDAEAGISRKKKQAELDRMESETIDFHKKV 165
Query: 180 AENYEKL 186
E Y +L
Sbjct: 166 VEGYRQL 172
>gi|333994674|ref|YP_004527287.1| dTMP kinase [Treponema azotonutricium ZAS-9]
gi|333736869|gb|AEF82818.1| dTMP kinase [Treponema azotonutricium ZAS-9]
Length = 213
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 20/181 (11%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDY--LNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
F VFEG D SG TTQ K L ++ L +PS + F G II L+ + L
Sbjct: 7 FAVFEGGDGSGTTTQLKLLKEHFSLAGKGLPSFYDTFEPTDSPIGRIIRSGLKHETALKP 66
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ LF+A+R E +IE+ E++ +DRY S + +
Sbjct: 67 ETIACLFAADRSEHLYEKNGIIERCARGELV--------------VSDRYIPSSLVYQGI 112
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER--YEQTDFQRKVAENYEK 185
G ++ K P P+ + F L+ E Q+R + +E+ +FQ +V Y+
Sbjct: 113 TCGEELPSYLN--KDFPCPEVIFFFDLDPETAQKRMETRASKDIFEELEFQIRVRSLYKA 170
Query: 186 L 186
+
Sbjct: 171 M 171
>gi|290558929|gb|EFD92316.1| dTMP kinase [Candidatus Parvarchaeum acidophilus ARMAN-5]
Length = 205
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 20/141 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FIV EG D +GK TQ+ L +L +N + P I G + L K+I +
Sbjct: 3 GKFIVIEGIDNAGKGTQSTLLTQHLRENGLKVVLTKEPTNGI-LGGLSKAALNKEINISG 61
Query: 68 QAAHLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+A LLF A+R E + ++ +G+T+ DRY FS +A+
Sbjct: 62 RALQLLFCADRAHHIETEIEPMMSKGLTV-----------------ICDRYFFSTLAYGF 104
Query: 127 AKEGMDISWCFQPEKGLPKPD 147
G++ W KPD
Sbjct: 105 V-SGINYKWLRSVNINFRKPD 124
>gi|428770757|ref|YP_007162547.1| thymidylate kinase [Cyanobacterium aponinum PCC 10605]
gi|428685036|gb|AFZ54503.1| Thymidylate kinase [Cyanobacterium aponinum PCC 10605]
Length = 226
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 84/210 (40%), Gaps = 33/210 (15%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
++ Q RG FIVFEG D SG +TQA L Y N S P G ++ E+L
Sbjct: 15 ISEQENRGYFIVFEGIDGSGSSTQADLLHQYFLSQNQESVLSPEPSNG-KIGKLLREFLA 73
Query: 61 KKI-----ELPDQAAHLLFSANR----WEREPTLTKLIEQGITLEIMHSSLENEKNLDQG 111
+L +Q LF+A+R + + KL+EQ I
Sbjct: 74 NPPSFLSDDLFEQQMAYLFTADRHFHLYNNVDGVKKLVEQNI-----------------N 116
Query: 112 CTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFG--DER 169
RY FS +A++ E D + + P PD ++ + + R G E
Sbjct: 117 VITTRYYFSSLAYNGKTES-DFHFVANLNQNFPPPDLLIYLDIPVDIALNRIGNRPFKEV 175
Query: 170 YEQTDFQRKVAENYEKLKDNI---WIDIDA 196
YE V +N+EK+ D ++ IDA
Sbjct: 176 YENKQKLTLVRQNFEKIIDEYKYPYLKIDA 205
>gi|379005290|ref|YP_005260962.1| thymidylate kinase [Pyrobaculum oguniense TE7]
gi|375160743|gb|AFA40355.1| thymidylate kinase [Pyrobaculum oguniense TE7]
Length = 196
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 28/178 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
F+V EG D SGK+T V L +P +V + G +I E+ ++ +
Sbjct: 3 FVVIEGIDGSGKST-----VISLLSRLLPRVYVTREPSSSPIGRLIKEWALREGTADPRV 57
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSAA 127
LLF+A+R E H E E L +G +RY S +A+ A
Sbjct: 58 DALLFAADRIE------------------HYKREIEPRLREGYIVICERYVESSIAYQGA 99
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFG-DERYEQTDFQRKVAENY 183
G+ I + +PKPD ++ ++ E A+ R K G E+YEQ F ++V Y
Sbjct: 100 A-GVPIEYIKFINSAVPKPDITVILDVDPEVAIARVKQRGAAEKYEQLSFLKRVRGIY 156
>gi|334133895|ref|ZP_08507431.1| hypothetical protein HMPREF9413_4815 [Paenibacillus sp. HGF7]
gi|333608526|gb|EGL19822.1| hypothetical protein HMPREF9413_4815 [Paenibacillus sp. HGF7]
Length = 205
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
I G D+SGK TQ+K L + L F TG +I ++LRK+ + +
Sbjct: 8 IISIGGLDKSGKHTQSKLLAERLRSEGYKVMQSEFHRYDTPTGELIMKWLRKEWGVSAET 67
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
L+ +A++ ++ T+ LENE+ + DRY VA+ A
Sbjct: 68 IELIMAADKQAQQDWFTE--------------LENEEY--EFLILDRYRLCQVAYGLAN- 110
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDE--RYE 171
G D W + +K + KPD ++ + E +RKG E RYE
Sbjct: 111 GRDGRWIMELQKYMRKPDLDIVIDIPAEESMKRKGKHGENDRYE 154
>gi|51894393|ref|YP_077084.1| thymidylate kinase [Symbiobacterium thermophilum IAM 14863]
gi|59798210|sp|Q67JB0.1|KTHY_SYMTH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|51858082|dbj|BAD42240.1| thymidylate kinase [Symbiobacterium thermophilum IAM 14863]
Length = 214
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 41/197 (20%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI FEG D SGK+TQ + L+ YL++ ++P F P G I E +R+ + P
Sbjct: 4 FISFEGVDGSGKSTQIRLLLQYLDEQSVPYVFTREPG-----GTPIAEQIRRVLLDPANR 58
Query: 70 AH------LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSG 121
LLF+A R E H S L++G DR+ S
Sbjct: 59 GMSVITEALLFAAARAE------------------HVSRTIRPALEEGKVVICDRFVDSS 100
Query: 122 VAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEE-ALQRRKGFGDERYEQTDFQR 177
+ + G+ + + Q + G +P ++ L E AL RR G E+ D
Sbjct: 101 LVYQGVAGGLPVEFLTQINEMATGALRPHRTIVLDLAPEVALARRTG------EEADRIE 154
Query: 178 KVAENYEKLKDNIWIDI 194
+ + Y +L ++D+
Sbjct: 155 RQSREYHQLVREGYLDL 171
>gi|365840634|ref|ZP_09381816.1| dTMP kinase [Anaeroglobus geminatus F0357]
gi|364560713|gb|EHM38634.1| dTMP kinase [Anaeroglobus geminatus F0357]
Length = 225
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 85/210 (40%), Gaps = 45/210 (21%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR---- 60
+ G I+ EG D SGK TQ + L L + V FPD + + ++ YLR
Sbjct: 1 MAAGKLIIIEGSDGSGKATQTELLRRRLRTDGHSVMAVAFPDYSSESSALVKMYLRGDFG 60
Query: 61 -KKIELPDQAAHLLFSANR---WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDR 116
K + AA ++ +R +ER+ L GI L DR
Sbjct: 61 AKADAVNPYAASAFYAVDRVASYERKWK-GFLTAGGIVL------------------ADR 101
Query: 117 YSFSGVAFSAAK--------EGMDISWCFQPEK-GLPKPDAVLLFKLNEEALQR----RK 163
Y+ S + + K E +D W F+ K GLP+PD V+L + ++ +R R
Sbjct: 102 YTTSNMLYQMIKINDPAEKEEYLDWIWEFEFHKLGLPEPDGVILLDVPQDVSERLMAVRT 161
Query: 164 G-----FGDERYEQTDFQRKVAENYEKLKD 188
G GD + DF RK Y +L D
Sbjct: 162 GKTGGETGDIHEKDRDFLRKCHAAYGELAD 191
>gi|332980962|ref|YP_004462403.1| thymidylate kinase [Mahella australiensis 50-1 BON]
gi|332698640|gb|AEE95581.1| thymidylate kinase [Mahella australiensis 50-1 BON]
Length = 212
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 78/193 (40%), Gaps = 30/193 (15%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RG FI EG D SGK+T A L DYLN+ IPS P T G + L +
Sbjct: 1 MSRGLFITIEGIDGSGKSTHASMLADYLNERGIPSVLTREPGGT-RIGEQVRSILLDNVN 59
Query: 65 LPDQAAH---LLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
D AA LL++A+R + + K +EQG + DR+ S
Sbjct: 60 -SDMAAMTEVLLYAASRAQHVAQVIKPALEQG-----------------KVVLCDRFVDS 101
Query: 121 GVAFSAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLNEEALQRR---KGFGDE-RYEQT 173
+A+ G+ + + G PD LL ++ E +R GF D E
Sbjct: 102 SLAYQGYARGLGLDTVKTINEHALGGVWPDITLLLDISPEIAWKRILKDGFKDRLESEGL 161
Query: 174 DFQRKVAENYEKL 186
+ + V E Y +
Sbjct: 162 ELLKVVYEGYRNI 174
>gi|334365868|ref|ZP_08514817.1| dTMP kinase [Alistipes sp. HGB5]
gi|313157974|gb|EFR57380.1| dTMP kinase [Alistipes sp. HGB5]
Length = 229
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 37/182 (20%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFP--DRTISTGHIIDEYLRKKI---- 63
FIV EG D +GK+TQ + L + S++V+FP D + G +I +LR +
Sbjct: 2 FIVLEGLDGAGKSTQIRMLRQLFTDRGVESEYVHFPRFDSPV-YGQLIARFLRGEFGGVQ 60
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
E+ L+F+ +R + P + + + +G + DRY +S V
Sbjct: 61 EVDPYLVALIFAGDRADAAPQIRQWLAEG-----------------KAVVLDRYVYSNVG 103
Query: 124 FSAAK----EGMD--ISWCFQPEKG---LPKPDAVLL----FKLNEEALQRRKGFGDERY 170
F AK E D W E G LP+PD L F E L + D Y
Sbjct: 104 FQCAKLPAGEERDRLADWIVNLEFGHNALPRPDLSLFLDVPFAFTERKLSEVREGDDRDY 163
Query: 171 EQ 172
Q
Sbjct: 164 LQ 165
>gi|304314109|ref|YP_003849256.1| thymidylate kinase [Methanothermobacter marburgensis str. Marburg]
gi|302587568|gb|ADL57943.1| predicted thymidylate kinase [Methanothermobacter marburgensis str.
Marburg]
Length = 194
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD-- 67
+I FEG D SGKTT + ++L +N V P + G I + PD
Sbjct: 2 YICFEGIDGSGKTTHSVLTAEWLRENGYRVFTVREPTDSRIGGLIREMLSSPDARTPDGQ 61
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ LLF+A+R LT + S +E E + +DR +S + +
Sbjct: 62 RILALLFAADR------LT-----------LRSKIEGEWS-GSVVVSDRCYYSSMVYQEP 103
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLK 187
E W + + P+PD V+L L+ E R G DE +E F +V E Y +L
Sbjct: 104 AE-----WVSEINRFAPQPDIVILLDLDVELAMERCGGTDE-FEDPSFLSRVRERYLELA 157
Query: 188 D-NIWIDIDADKDID 201
D N + +DA + ++
Sbjct: 158 DKNEFYIVDAARGLN 172
>gi|429762900|ref|ZP_19295270.1| dTMP kinase [Anaerostipes hadrus DSM 3319]
gi|429180525|gb|EKY21742.1| dTMP kinase [Anaerostipes hadrus DSM 3319]
Length = 541
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 24/187 (12%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI-ELP 66
G F+ EG D +GKTTQ + L DYL+ P T + + + L K+ E+
Sbjct: 2 GLFLTVEGPDGAGKTTQIELLRDYLSDKGYDIIVCREPGGTPISEAVRNVILNKEFTEMG 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
LL++A R +LIE E++ +LE+ K + DR+ S +
Sbjct: 62 HMTELLLYAAAR-------AQLIE-----EVIRPALEDGKIV----ICDRFVESSAVYQG 105
Query: 127 AKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRKGFGDE----RYEQTDFQRKV 179
GM I ++ + G PD ++ L+ EA RK E E DF +KV
Sbjct: 106 IARGMGIDLVYKVNQFAIGDTMPDLTIMIDLDAEAGISRKKKQAELDRMESETIDFHKKV 165
Query: 180 AENYEKL 186
E Y +L
Sbjct: 166 VEGYRQL 172
>gi|163847788|ref|YP_001635832.1| dTMP kinase [Chloroflexus aurantiacus J-10-fl]
gi|222525656|ref|YP_002570127.1| dTMP kinase [Chloroflexus sp. Y-400-fl]
gi|163669077|gb|ABY35443.1| dTMP kinase [Chloroflexus aurantiacus J-10-fl]
gi|222449535|gb|ACM53801.1| dTMP kinase [Chloroflexus sp. Y-400-fl]
Length = 226
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 99/247 (40%), Gaps = 50/247 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
+G FI FEG + +GK+TQA++L + L P+ P G I E +R+ +
Sbjct: 3 QGFFITFEGPEGAGKSTQARRLYERLQSIGYPTILTREPG-----GTRISELIRRILVDL 57
Query: 64 ---ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
E+ LLFSA R +L+ + I + + DRY+ S
Sbjct: 58 RHTEMAPTTEILLFSAAR-------AQLVSELIRPYLATGGI---------VVCDRYADS 101
Query: 121 GVAFSAAKEGMDIS---WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQ- 176
A+ G D+ G KPD L +++ E +RK ER E Q
Sbjct: 102 TFAYQGYGLGRDLEELRTITDIATGGLKPDLTLYLRIDVEVGLQRKRASRERIEPGSVQP 161
Query: 177 --------------RKVAENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
++VA+ + +L + W +DAD+ +D L + +V+ + +Q
Sbjct: 162 PEWNRLDARDLAYHQRVAQGFNELMAQEPERWYALDADQPVDELAEQIWQVVMARL--AQ 219
Query: 220 FSPLESN 226
PL +
Sbjct: 220 VMPLAAQ 226
>gi|384438962|ref|YP_005653686.1| thymidylate kinase [Thermus sp. CCB_US3_UF1]
gi|359290095|gb|AEV15612.1| Thymidylate kinase [Thermus sp. CCB_US3_UF1]
Length = 201
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 32/204 (15%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KIELP 66
G F+ EG D +GK+TQA L +L + + P + + LR + EL
Sbjct: 3 GLFLTLEGLDGAGKSTQASLLARFLEAQGLRVRLTREPGGGLP--GVRPLLLRAGQGELS 60
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
QA +LLFSA+R E +++ +LE + +DRY S +A+
Sbjct: 61 PQAEYLLFSADRAEH------------VRKVILPALEG----GEWVVSDRYLDSSLAYQG 104
Query: 127 AKEGMDISWCFQPEK----GLPKPDAVLLFKL-NEEALQRRKGFGDERYEQTD--FQRKV 179
G+ + W + K GL KP L L EEAL R K +R E+ F ++V
Sbjct: 105 FGRGLPLPWLLEVAKEATLGL-KPRRTFLLDLPPEEALARLK--DKDRMERMGLAFFQRV 161
Query: 180 AENYEKL---KDNIWIDIDADKDI 200
E Y L + ++ +DA + +
Sbjct: 162 REGYLGLARAEPERFVVLDATRPV 185
>gi|416406961|ref|ZP_11688206.1| Thymidylate kinase [Crocosphaera watsonii WH 0003]
gi|357260955|gb|EHJ10278.1| Thymidylate kinase [Crocosphaera watsonii WH 0003]
Length = 208
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP--- 66
FIV EG D++GKTTQA+ L YL K N + + P T +I + +RK ++ P
Sbjct: 5 FIVLEGIDKAGKTTQAELLKHYLIKQNNSAIISSEP-----TEGVIGKLIRKAMQNPVFV 59
Query: 67 -------DQAAHLLFSANR----WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTND 115
DQ LF+A+R + + KLI+Q H +
Sbjct: 60 MKDKEKFDQQMAYLFAADRHYHLYNEVDGVYKLIKQD------HCHV----------IAT 103
Query: 116 RYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQR-RKGFGDERYEQT 173
RY FS +A++ + + + + K P PD V+ + + AL R K E YE
Sbjct: 104 RYYFSSLAYNTNNQE-EFDFVYGLNKRFPNPDVVIYLDIPLDVALCRLEKVTNKEVYETQ 162
Query: 174 DFQRKVAENYEKL 186
+ ++V +NYE++
Sbjct: 163 EKLQQVKDNYEQI 175
>gi|85859637|ref|YP_461839.1| thymidylate kinase [Syntrophus aciditrophicus SB]
gi|123516788|sp|Q2LUB1.1|KTHY_SYNAS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|85722728|gb|ABC77671.1| thymidylate kinase [Syntrophus aciditrophicus SB]
Length = 219
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 86/212 (40%), Gaps = 34/212 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKIELPDQ 68
FI FEG + GKTTQ K YL IP P T I + L R E+ +
Sbjct: 4 FISFEGIEGCGKTTQLKLAAQYLRTLKIPVGTTEEPGGTPLGKKIRNILLNRGPFEICAE 63
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
A LLF A R + E++ SL Q DR+S + +
Sbjct: 64 AETLLFVAARAQH------------VREVILPSLAR----GQWILCDRFSDATAVYQGCV 107
Query: 129 EGMDISWCFQPEK---GLPKPDAVLLFKLNEE-----ALQRRKGFG----DERYEQ--TD 174
G+D +W Q + KP+ LLF L E A+QR G ++R+EQ +
Sbjct: 108 RGIDEAWIRQLDSFATSFLKPNLTLLFDLPAETGLHRAMQRMTGIPENSREDRFEQEGLN 167
Query: 175 FQRKVAENYEKL---KDNIWIDIDADKDIDTL 203
F K+ E Y L + + I+A DI ++
Sbjct: 168 FHEKIREGYLALARQESERFRIINAAADIPSI 199
>gi|418577137|ref|ZP_13141264.1| thymidylate kinase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379324417|gb|EHY91568.1| thymidylate kinase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 205
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 33/208 (15%)
Query: 9 AFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQ 68
AFI FEG + SGKTT +++ L N S + + TG I E L + ++ D+
Sbjct: 3 AFITFEGPEGSGKTTVIQQVAQKL--ENQYSVVLTREPGGVKTGEQIREVLLEGDDMDDR 60
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
LLF+A+R RE + K+I SLEN K + DRY S +A+
Sbjct: 61 TEALLFAASR--REHLVGKVI----------PSLENGKLV----LCDRYIDSSLAYQGYA 104
Query: 129 EGMDISWCFQPEK----GLPKPDAVLLFKLNEEALQRRKGFGDER------YEQTDFQRK 178
G+ I + GL PD + ++ A+ R + ++R E F K
Sbjct: 105 RGIGIEEVKSINEFAINGL-YPDITIYLDVS-VAVGRERILKNQRNQNRLDQEDVKFHEK 162
Query: 179 VAENYEKLKDN---IWIDIDADKDIDTL 203
V E Y+K+ N +I IDAD+ ID +
Sbjct: 163 VVEGYKKIIHNESERFIVIDADRSIDEV 190
>gi|332796217|ref|YP_004457717.1| dTMP kinase [Acidianus hospitalis W1]
gi|332693952|gb|AEE93419.1| dTMP kinase [Acidianus hospitalis W1]
Length = 189
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
I EG D SGKTT AK+L +L + T +I E K
Sbjct: 2 LIAIEGIDGSGKTTLAKELKKWLENEKKKKVLLTAEPFTEEISKLIQEEGWK----DPVT 57
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLFSA+R G+ H + ++N DRY +S +A+ +A
Sbjct: 58 LTLLFSADR-------------GV-----HVNWIMKQNQYDIIITDRYYYSTIAYQSAM- 98
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGDERY---EQTDFQRKVAENYEK 185
G+D +W + K PKP+ LL + E A+ R K D+++ E+ +KV ENY +
Sbjct: 99 GIDKNWIIEVNKFFPKPELTLLLDIPAEIAITRIK--KDDKFNFKEKLSLLKKVRENYLE 156
Query: 186 LKDN 189
+ N
Sbjct: 157 ITKN 160
>gi|119719934|ref|YP_920429.1| dTMP kinase [Thermofilum pendens Hrk 5]
gi|119525054|gb|ABL78426.1| thymidylate kinase [Thermofilum pendens Hrk 5]
Length = 254
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 88/203 (43%), Gaps = 32/203 (15%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
S++ G ++ EG D SGKTTQA L + L+ V P I E+L K
Sbjct: 49 SRVDGGLYVALEGIDGSGKTTQAAMLYEKLSAEGFQVVIVREP-----WVPAIKEFLYKH 103
Query: 63 IELPDQAAHLLFSANR--WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+L +A LF+A+R +RE L L I + +DR F+
Sbjct: 104 -DLDVEAEVYLFAADRIILQREVVLPSLRAGKIVV------------------SDRSVFA 144
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKG-FGDERYEQTDFQRK 178
+A+ +++ G D + K + PD V+L L EEA++R R+E + K
Sbjct: 145 SLAYQSSR-GADQDFILAVNKSVRFPDVVVLLDLPVEEAMKRLSSRVAQTRFEDPGYMEK 203
Query: 179 VAENYEKLKDNI---WIDIDADK 198
V Y +L + +I +DA K
Sbjct: 204 VRAKYLQLAEEYPEKFIVVDASK 226
>gi|445063009|ref|ZP_21375289.1| thymidylate kinase [Brachyspira hampsonii 30599]
gi|444505607|gb|ELV06089.1| thymidylate kinase [Brachyspira hampsonii 30599]
Length = 185
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 27/197 (13%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G IV EG D SGK++ L D LN I S + P + + L K ++ +
Sbjct: 3 GKLIVLEGIDGSGKSSIGMMLTDTLNNLGIKSIYTFEPTHAYYGSKLRESMLSKDLKPEE 62
Query: 68 QAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ + LF A+R E + K + G + + DRY +S +A+
Sbjct: 63 ELS--LFIADRKEHIKHMIKPAVNDGYVIVL-----------------DRYMYSSIAYQG 103
Query: 127 AKEGMDISWCFQPEKG-LPKPDAVLLFKLN-EEALQR---RKGFGDERYEQTDFQRKVAE 181
AK G+D + + K + +PD V + L+ E AL R ++GF D R+E ++ +V +
Sbjct: 104 AK-GIDKEYIYNLHKDFILQPDLVFILHLDIETALNRIMEKRGFVD-RFENKNYLEEVDK 161
Query: 182 NYEKLKDNIWIDIDADK 198
+ IDA K
Sbjct: 162 IFFSFNAPYIHHIDASK 178
>gi|383790740|ref|YP_005475314.1| thymidylate kinase [Spirochaeta africana DSM 8902]
gi|383107274|gb|AFG37607.1| thymidylate kinase [Spirochaeta africana DSM 8902]
Length = 219
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 85/209 (40%), Gaps = 32/209 (15%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
PR FIV EG D +G TTQA L L + + S G +I L ++
Sbjct: 16 PR--FIVLEGIDGAGTTTQAHLLARALAQAG-EQVYATCEPTDGSIGRLIRTLLSGTEQV 72
Query: 66 -PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
P AH LF+A+R E E GI + +DRY FS +A+
Sbjct: 73 TPHTMAH-LFAADRCEH----VYAPEHGIVARLARGDW---------VISDRYVFSSLAY 118
Query: 125 SAAKEGMDISW--CFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYEQTDFQRKVA 180
+G D+ + Q G+P P V L+ + A+ R G + YE T FQ KV+
Sbjct: 119 ----QGPDVGFERVRQLNSGIPLPRWVFHLSLSGKLAMSRLSGRSTLDIYENTAFQDKVS 174
Query: 181 ENYEKL------KDNIWIDIDADKDIDTL 203
Y +D W +DA +D +
Sbjct: 175 HAYSTAYQQFPQEDTTWQVLDATDSVDKI 203
>gi|225848089|ref|YP_002728252.1| thymidylate kinase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643400|gb|ACN98450.1| thymidylate kinase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 204
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE--L 65
G FI FEG + SGK+TQAK+L +YL I + P T S G I E L E
Sbjct: 2 GVFITFEGIEGSGKSTQAKRLYEYLTNIGIKAYLTREPGGT-SIGKKIREILLSHWEENF 60
Query: 66 PDQAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
P A LL+ A+R + K L++Q D +DR+ S A+
Sbjct: 61 PSIAELLLYQADRNIHVNNIIKPLLQQ-----------------DYIVISDRFYDSTTAY 103
Query: 125 SAAKEGMDISWCFQPEK----GLPKPDAVLLFKLN-EEALQRRKGFGDE-RYEQTDFQRK 178
G+D S K G+ KP L L +EA +R D E +F +K
Sbjct: 104 QHYARGIDYSIVDYLNKLATEGI-KPHITFLLDLPVQEAFKRLNREKDRLESEGLNFHQK 162
Query: 179 VAENYEKLKD 188
V E + K+ D
Sbjct: 163 VREGFLKIAD 172
>gi|67925004|ref|ZP_00518388.1| Thymidylate kinase [Crocosphaera watsonii WH 8501]
gi|67853148|gb|EAM48523.1| Thymidylate kinase [Crocosphaera watsonii WH 8501]
Length = 208
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP--- 66
FIV EG D++GKTTQA+ L YL K N + + P T +I + +RK ++ P
Sbjct: 5 FIVLEGIDKAGKTTQAELLKHYLIKQNNSAIISSEP-----TEGVIGKLIRKAMQNPVFV 59
Query: 67 -------DQAAHLLFSANR----WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTND 115
DQ LF+A+R + + KLI+Q H +
Sbjct: 60 MKDKEKFDQQMAYLFAADRHYHLYNEVDGVYKLIKQD------HCHV----------IAT 103
Query: 116 RYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQR-RKGFGDERYEQT 173
RY FS +A++ + + + + K P PD V+ + + AL R K E YE
Sbjct: 104 RYYFSSLAYNTNNQE-EFDFVYGLNKRFPNPDVVIYLDIPLDVALCRLEKVTNKEVYETQ 162
Query: 174 DFQRKVAENYEKL 186
+ ++V +NYE++
Sbjct: 163 EKLQQVKDNYEQI 175
>gi|451981669|ref|ZP_21930018.1| Thymidylate kinase [Nitrospina gracilis 3/211]
gi|451761122|emb|CCQ91282.1| Thymidylate kinase [Nitrospina gracilis 3/211]
Length = 212
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 30/220 (13%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR--K 61
++ RG I EG D +GKTTQ L DYL + +P + P + + G I L +
Sbjct: 8 KLDRGYLIALEGIDGTGKTTQGNLLADYLEQRGLPVVRLREPTQGM-WGQKIRRILTEGR 66
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
P++ + + + +EQ I + N ++ DRY FS
Sbjct: 67 GGTTPEEELQWFLNDRKED--------VEQNIRPAL---------NTNKLVVIDRYYFST 109
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQR----RKGFGDERYEQTDFQ 176
A+ A + C E P+PD VL+F + E + +R R GF +E+ D+
Sbjct: 110 AAYQGALGFDPVKICADNEAFAPRPDRVLIFSGSLETSFERIAKGRDGF--SSFEKKDYL 167
Query: 177 RKVAENYEKLKDNIWIDIDADKDIDTL-GLIVKDIVIDTI 215
+KV ++ + ID+D ++ + G +V V+D +
Sbjct: 168 QKVQAIFDSFEGPHIRRIDSDGSVEAVHGQVV--TVVDAL 205
>gi|94266074|ref|ZP_01289792.1| Thymidylate kinase [delta proteobacterium MLMS-1]
gi|94267013|ref|ZP_01290658.1| Thymidylate kinase [delta proteobacterium MLMS-1]
gi|93452287|gb|EAT02928.1| Thymidylate kinase [delta proteobacterium MLMS-1]
gi|93453357|gb|EAT03788.1| Thymidylate kinase [delta proteobacterium MLMS-1]
Length = 218
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 21/200 (10%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G I EG D +GK+TQ K L L + + F G + + + + +LP
Sbjct: 14 GILIALEGIDGTGKSTQLKLLARRLRELGL-EVVTTFEPTDGPHGRYLRQMFKNRAQLPP 72
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ LF A+R + +EQ I + + DRY FS A+ A
Sbjct: 73 KEELRLFIADRHDH-------VEQVIAPALAAGKV---------VLTDRYYFSTAAYQGA 116
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFK----LNEEALQRRKGFGDERYEQTDFQRKVAENY 183
+ + E+ P+PD VLL + + ++ +G +EQ D+ R+V +
Sbjct: 117 AGHDPAAIIAENEQFAPRPDLVLLLEAPPAVGIARVRELRGESLNDFEQEDYLRRVTAIF 176
Query: 184 EKLKDNIWIDIDADKDIDTL 203
L D+ IDA +D +
Sbjct: 177 ASLADSRIRRIDATGRLDQV 196
>gi|328951753|ref|YP_004369087.1| thymidylate kinase [Desulfobacca acetoxidans DSM 11109]
gi|328452077|gb|AEB07906.1| Thymidylate kinase [Desulfobacca acetoxidans DSM 11109]
Length = 217
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 86/219 (39%), Gaps = 26/219 (11%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G I FEG D GKTTQA L L++ + P I L + L
Sbjct: 10 GRLIAFEGVDGVGKTTQAHLLAQALSRLGLSVILTREPTTGPWGQQIRQILLHGRQGLTP 69
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+A LF A+R E +++ +L K + DRY FS +A+ A
Sbjct: 70 KAELELFIADRREH------------VAQVIRPALVAGKIV----ITDRYYFSSMAYQGA 113
Query: 128 KEGMD---ISWCFQPEKGLPKPDAVLLFKLN----EEALQRRKGFGDERYEQTDFQRKVA 180
G+D I C E P+PD ++ L LQ+R G +E + KVA
Sbjct: 114 L-GLDPDRIQKCH--ETFAPRPDLAIILTLPLSEITARLQQRSGQKRSSFENLAYLTKVA 170
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
+ + +L+ +D I + + +V +K S+
Sbjct: 171 QIFSRLRAPYLQHLDGQGTIAAVHARILTLVQPLLKPSR 209
>gi|390947915|ref|YP_006411675.1| thymidylate kinase [Alistipes finegoldii DSM 17242]
gi|390424484|gb|AFL78990.1| thymidylate kinase [Alistipes finegoldii DSM 17242]
Length = 229
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 37/182 (20%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFP--DRTISTGHIIDEYLRKKI---- 63
FIV EG D +GK+TQ + L + S++V+FP D + G +I +LR +
Sbjct: 2 FIVLEGLDGAGKSTQIRMLRQLFADRGVESEYVHFPRFDSPV-YGQLIARFLRGEFGGVQ 60
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
E+ L+F+ +R + P + + + +G + DRY +S V
Sbjct: 61 EVDPYLVALIFAGDRADAAPQIRQWLAEG-----------------KAVVLDRYVYSNVG 103
Query: 124 FSAAK----EGMD--ISWCFQPEKG---LPKPDAVLL----FKLNEEALQRRKGFGDERY 170
F AK E D W E G LP+PD L F E L + D Y
Sbjct: 104 FQCAKLPAGEERDRLADWIVNLEFGHNALPRPDLSLFLDVPFAFTERKLSEVREGDDRDY 163
Query: 171 EQ 172
Q
Sbjct: 164 LQ 165
>gi|206900865|ref|YP_002250503.1| thymidylate kinase [Dictyoglomus thermophilum H-6-12]
gi|206739968|gb|ACI19026.1| thymidylate kinase [Dictyoglomus thermophilum H-6-12]
Length = 205
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 77/180 (42%), Gaps = 25/180 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI FEG D SGKTTQA L DYL P T G I E L PD
Sbjct: 6 FITFEGIDGSGKTTQAILLKDYLESKGFKVYLTREPGGT-EVGSKIREILLS----PD-- 58
Query: 70 AHLLFSANRW-EREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
FS N W E L +E I ++ L E+N C +RY+ S +A+
Sbjct: 59 ----FSINPWTEVFLYLASRVENTI---VVKKKL--EENYIVIC--ERYADSTIAYQGYG 107
Query: 129 EGMDISWCFQ----PEKGLPKPDAVLLFKLNEE-ALQRRKGFGDERYEQTDFQRKVAENY 183
+ ++ + GL KPD +L L+ E AL+R+K F E DF +V E Y
Sbjct: 108 RNLPLNILAEMNDIATSGL-KPDLTVLIDLDPELALRRKKTFDRIEMEGKDFYYRVREGY 166
>gi|374298199|ref|YP_005048390.1| thymidylate kinase [Clostridium clariflavum DSM 19732]
gi|359827693|gb|AEV70466.1| thymidylate kinase [Clostridium clariflavum DSM 19732]
Length = 210
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 90/215 (41%), Gaps = 29/215 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI EG D SGKTTQ K L YL P G I E +R I P
Sbjct: 3 RGLFITAEGTDGSGKTTQIKLLESYLKDRGFEVVVTREPG-----GTKIGEKIRSIILDP 57
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D + E L + E++ SLE K + DR+ S +
Sbjct: 58 DNTKMTYIT------EMMLYVSARAQLVGELIRPSLEQGKVV----ICDRFVDSSYVYQG 107
Query: 127 AKEGMDISWCFQPEK----GLPKPDAVLLFKLNEE-ALQRR-KGFGDERYEQ--TDFQRK 178
++I + G+ PD L F ++ AL RR + G +R EQ DF RK
Sbjct: 108 FGRNINIELIEKVNSIALDGI-MPDVTLFFDVDPNIALSRRIRSTGADRIEQETMDFHRK 166
Query: 179 VAENYEKL----KDNIWIDIDADKDIDTLGLIVKD 209
V E Y+KL + I I ID+++ I+ + L VK+
Sbjct: 167 VYEGYKKLVSKYPNRIKI-IDSNRSIEEIFLDVKE 200
>gi|427731147|ref|YP_007077384.1| thymidylate kinase [Nostoc sp. PCC 7524]
gi|427367066|gb|AFY49787.1| thymidylate kinase [Nostoc sp. PCC 7524]
Length = 208
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 32/218 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP- 66
G FIVFEG + GKT+Q + +L IP P T H+ L K + P
Sbjct: 3 GRFIVFEGVEGCGKTSQMQLCAKWLESLGIPVIITREPGGTELGWHLRRLLLEKTEDQPI 62
Query: 67 -DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVA 123
+ LL++A+R + H + E + NL G DRY S +A
Sbjct: 63 AEVTELLLYAADRSQ------------------HVAQELKPNLAAGKYILCDRYIDSTIA 104
Query: 124 FSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRK---GFGDERYEQ--TDF 175
+ G+D++ Q + G D + ++ E RK G G +R EQ F
Sbjct: 105 YQGYGRGLDMTLIHQLNQIATGGLTSDLTIWLDVDVEVGFARKGKDGLGLDRIEQETIAF 164
Query: 176 QRKVAENYEKL--KDNIWIDIDADKDIDTLGLIVKDIV 211
R+V + Y L + I +D + +T+ I++ IV
Sbjct: 165 HRRVQQGYADLAASSSRIIRVDGNLSKETVHQIIQGIV 202
>gi|340624356|ref|YP_004742809.1| thymidylate kinase [Methanococcus maripaludis X1]
gi|339904624|gb|AEK20066.1| thymidylate kinase [Methanococcus maripaludis X1]
Length = 199
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 86/216 (39%), Gaps = 62/216 (28%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D GKTTQAK + + LN N F G I E L + +
Sbjct: 4 FIVFEGIDGCGKTTQAKLIAEKLNAN------FTFEPTDGKIGKSIREILAGS-KCNKET 56
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R E H S E + +DRY +S
Sbjct: 57 LALLFAADRVE------------------HVSKIEEDLKNAHVVSDRYVYS--------- 89
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNE----------------EALQRRKGFGDERYEQT 173
S +Q +G+PK ++K+N+ EAL+R + E +E+
Sbjct: 90 ----SIVYQMTQGIPKD---FIYKINDYAKIPDLVVLLDVDLNEALKRMESREKEIFEKL 142
Query: 174 DFQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKD 209
+FQ+K+ E Y L I+ + K + G IV D
Sbjct: 143 EFQKKIKEGYYNL-----INSENGKFMPKYGFIVID 173
>gi|282901980|ref|ZP_06309878.1| Thymidylate kinase [Cylindrospermopsis raciborskii CS-505]
gi|281193067|gb|EFA68066.1| Thymidylate kinase [Cylindrospermopsis raciborskii CS-505]
Length = 216
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP- 66
G IVFEG + SGKTTQ + L +L I P T ++ L E P
Sbjct: 3 GKLIVFEGVEGSGKTTQMQMLAQWLQTLGISFLLTREPGGTHLGQNLRKLLLETFYEQPL 62
Query: 67 -DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVA 123
+ A LL++A+R + ++ K NL G DRY+ S VA
Sbjct: 63 DEMAELLLYTADRSQHVSSIIK------------------PNLATGKYILCDRYTNSTVA 104
Query: 124 FSAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYEQ--TDFQ 176
+ G++ I Q G + D + ++ E L R++G + +R EQ +F
Sbjct: 105 YQGYGRGLNMIIIDQLNQIATGGLESDLTIWLDIDVEIGLSRKRGQAELDRMEQETIEFH 164
Query: 177 RKVAENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTI 215
+V E Y K+ N I +D +++ + + ++ I+ID +
Sbjct: 165 HRVQEGYNKIAKNHPSKIIRVDGNREPELVQENIRKILIDNL 206
>gi|224824708|ref|ZP_03697815.1| dTMP kinase [Pseudogulbenkiania ferrooxidans 2002]
gi|347538563|ref|YP_004845987.1| dTMP kinase [Pseudogulbenkiania sp. NH8B]
gi|224603201|gb|EEG09377.1| dTMP kinase [Pseudogulbenkiania ferrooxidans 2002]
gi|345641740|dbj|BAK75573.1| dTMP kinase [Pseudogulbenkiania sp. NH8B]
Length = 208
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 32/189 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI EG D +GK+TQ + D+L + I + F P T+ + + L E+
Sbjct: 3 RGTFITLEGVDGAGKSTQLAAVRDWLAEQGIDAVFTREPGGTVLGEKLRELLLAVDTEVT 62
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ LL A R E + ++IE + + +DR++ + A+
Sbjct: 63 LETETLLMFAARQEH---IARVIEPALA-------------AGRWVVSDRFTDATFAYQG 106
Query: 127 AKEGMDIS-------WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGD---ERYEQ--TD 174
G+ + W ++GL +PD LLF + + RR G+ +R+EQ D
Sbjct: 107 GGRGLPFARIEALEDWV---QQGL-QPDLTLLFDVPLDVAARRMAGGERVLDRFEQEAAD 162
Query: 175 FQRKVAENY 183
F +V Y
Sbjct: 163 FHARVRAAY 171
>gi|406965646|gb|EKD91262.1| Thymidylate kinase [uncultured bacterium]
Length = 227
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 33/199 (16%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST-GHIIDEYLRKKI 63
+ +G IV EG D +GK TQ K L D L I + ++FP T + G ++ +L+ +
Sbjct: 1 MSKGKLIVIEGTDGAGKGTQLKILEDKLKSLKIKFKVIDFPRYTNNLYGELVGRFLKGEF 60
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
DQ +P + L G + H ++N Q +RY S A
Sbjct: 61 GPLDQV------------DPYIASLAYAGDRMLAGH-EIKNWLADGQVVIANRYVLSNKA 107
Query: 124 FSAAK-----EGMDISWCFQPEKGL---PKPDAVLLFKLNEEALQ-------RRKGFGDE 168
+ AA+ I+W + E GL P+ D V+ + E Q +R GD+
Sbjct: 108 YMAARLPENERKKYINWLEKLEYGLNKVPREDLVIFLYVPSEIGQENVLKKEKRSHLGDK 167
Query: 169 RY----EQTDFQRKVAENY 183
+ E +FQ+KVA+ Y
Sbjct: 168 KRDIMEEDLNFQKKVAQIY 186
>gi|406983527|gb|EKE04709.1| Thymidylate kinase [uncultured bacterium]
Length = 205
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 76/187 (40%), Gaps = 25/187 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI FEG D SGK+TQ K+ ++L + NI P T + + L + ++
Sbjct: 4 RGLFITFEGIDGSGKSTQLNKVAEFLKEKNIDCIITRDPGGTDLGSKLRNILLNYEGKIY 63
Query: 67 DQAAHLLFSANRWER--EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L+ A+R + E + L + L C DRY S +A+
Sbjct: 64 PLCELFLYLADRAQHVDEKIIPALNSGTVVL----------------C--DRYIDSTIAY 105
Query: 125 SAAKEGMDISWCFQPEKGLPK---PDAVLLFKLNEEALQRRKGFGDERY--EQTDFQRKV 179
G++I PD L+F +N E +R G +R E +F +KV
Sbjct: 106 QGYARGLNIEELVSLNNFATHTLWPDLTLIFDINPEISLKRVGDNKDRLESESINFHKKV 165
Query: 180 AENYEKL 186
E Y +L
Sbjct: 166 REGYLEL 172
>gi|45358597|ref|NP_988154.1| thymidylate kinase [Methanococcus maripaludis S2]
gi|59798295|sp|Q6LYF7.1|KTHY_METMP RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|44921355|emb|CAF30590.1| Thymidylate kinase [Methanococcus maripaludis S2]
Length = 199
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 86/216 (39%), Gaps = 62/216 (28%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D GKTTQAK + + LN N F G I E L + +
Sbjct: 4 FIVFEGIDGCGKTTQAKLVAEKLNAN------FTFEPTDGKIGKSIREILAGS-KCNKET 56
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R E H S E + +DRY +S
Sbjct: 57 LALLFAADRVE------------------HVSKIEEDLKNAHVVSDRYVYS--------- 89
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNE----------------EALQRRKGFGDERYEQT 173
S +Q +G+PK ++K+N+ EAL+R + E +E+
Sbjct: 90 ----SIVYQMTQGIPKD---FIYKINDYAKIPDLVVLLDVDLNEALKRMESREKEIFEKL 142
Query: 174 DFQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKD 209
+FQ+K+ E Y L I+ + K + G IV D
Sbjct: 143 EFQKKIKEGYYNL-----INSENGKFMPKYGFIVID 173
>gi|410722046|ref|ZP_11361361.1| thymidylate kinase [Methanobacterium sp. Maddingley MBC34]
gi|410597852|gb|EKQ52459.1| thymidylate kinase [Methanobacterium sp. Maddingley MBC34]
Length = 191
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 30/207 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL---RKKIELP 66
+I EG D SGK+TQ ++L +L + P + G +I + L R + E
Sbjct: 2 YICLEGIDGSGKSTQLERLGKWLEDCGFSVTLIREPTDS-PVGQLIRKMLQDPRAQDEGF 60
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ LLF+A+R ++ ++ E+ ++Q +DR +S +A+
Sbjct: 61 QRTLALLFAADR-----------------TLLMDNIRKEEEMNQIVLSDRSFYSSLAYQN 103
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENYEK 185
+E W Q + +PD V+L L E AL R G + +E+ +F V + Y K
Sbjct: 104 GEE-----WIAQINQHALEPDLVILLDLEIETALTRCA--GTDSFEEANFLESVRQRYLK 156
Query: 186 L-KDNIWIDIDADKDIDTLGLIVKDIV 211
L + + ++ ++A ++ + +K IV
Sbjct: 157 LAQQHGFMVVNAGNGVNKVHSDIKRIV 183
>gi|325849205|ref|ZP_08170656.1| dTMP kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480205|gb|EGC83272.1| dTMP kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 209
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 99/227 (43%), Gaps = 45/227 (19%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK------ 61
G IVFEG D SGKTT +K+ D L ++ P G I E +R+
Sbjct: 3 GLLIVFEGPDGSGKTTVLEKVYDKLLQDGYDIYKFREP-----GGTEISEKIREIILDND 57
Query: 62 KIELPDQAAHLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
I++ + LL++A+R + E L L+E+G + DR+ S
Sbjct: 58 NIKMSARCEALLYAASRAQLIEEKLRPLLEKGSII-----------------LCDRFVLS 100
Query: 121 GVAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLN-EEALQR-RKGFGDERYEQTD- 174
+ + G+ I + G K D L ++ + A+ R RK F +R E D
Sbjct: 101 SMLYQGIGRGLGIDEVKKINDFAIGEIKADLTLFLNIDYKTAIDRKRKNFVSDRLENEDD 160
Query: 175 -FQRKVAENY----EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
F +K E Y ++ KD I I IDA+K +D IV D IDTIK
Sbjct: 161 SFHKKTYEGYIDLSKRFKDEI-ISIDANKSLD----IVVDNCIDTIK 202
>gi|237756554|ref|ZP_04585078.1| thymidylate kinase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691282|gb|EEP60366.1| thymidylate kinase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 204
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 37/226 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYL---NKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
G FI FEG + SGKTTQ L DYL KN I ++ P T G I E L K +
Sbjct: 2 GFFITFEGIEASGKTTQINLLYDYLKSIGKNVIKTR---EPGGT-KIGQKIREILLSKWD 57
Query: 65 --LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
P A LL+ A+R +H+ ++ D +DRY S
Sbjct: 58 EKFPYIAELLLYEADRNIH----------------IHNIIKPSLEADYIVLSDRYIDSTT 101
Query: 123 AFSAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTD--FQR 177
A+ G+D +S+ KP+ L + + +R +R E D F +
Sbjct: 102 AYQHYARGIDYEIVSYLNTLATDRLKPNLTFLIDIPAQISLKRLSKTKDRIESEDIEFHK 161
Query: 178 KVAENYEKLKDN---IWIDIDADKDIDTLGLIVKDIVIDTIKKSQF 220
K+ E + K+ +N ++ ID DI + + I++DT+K+ +
Sbjct: 162 KLREGFLKIAENEKDRFVVIDGTMDI----MEIHKIIVDTLKQRKI 203
>gi|219849803|ref|YP_002464236.1| dTMP kinase [Chloroflexus aggregans DSM 9485]
gi|219544062|gb|ACL25800.1| dTMP kinase [Chloroflexus aggregans DSM 9485]
Length = 225
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 96/244 (39%), Gaps = 45/244 (18%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL--RKKIE 64
RG FI FEG + +GK+TQA++L + L P P T G +I L + E
Sbjct: 3 RGLFITFEGPEGAGKSTQARRLYERLQAAGYPVILTREPGGT-RIGELIRRILIDLRHTE 61
Query: 65 LPDQAAHLLFSANRWEREPTLTK--LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+ LLFSA R + L + L GI + C DRY+ S
Sbjct: 62 MAPTTEILLFSAARAQLVSELIRPYLATGGIVV----------------C--DRYADSTF 103
Query: 123 AFSAAKEGMDIS---WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTD----- 174
A+ G D+ + G KPD +++ E +RK ER E+
Sbjct: 104 AYQGYGLGRDLEELRVITEVATGGLKPDLTFYLQIDVEIGLQRKQHARERSERGGQPAEW 163
Query: 175 ---------FQRKVAENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSP 222
+ R+V + +L + W +DAD+ +D L + V+ + + +P
Sbjct: 164 NRLDARDLAYHRRVMHGFVELMKQEPERWHALDADQPVDELAEQIWHAVMPLLDR--ITP 221
Query: 223 LESN 226
L +
Sbjct: 222 LATR 225
>gi|406875196|gb|EKD25017.1| dTMP kinase [uncultured bacterium (gcode 4)]
Length = 194
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS-TGHIIDEYLRKK--I 63
+G FIVF G + GKTTQAK L++ L + I +F + + TG +I+ YLR+
Sbjct: 2 KGKFIVFYGINNLGKTTQAKLLIEKLKQQGIKVEFTKYAHYDLEPTGKLINGYLREGNPH 61
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITL 95
+ + LL A R + E L + ++QGI +
Sbjct: 62 DFSPREFQLLHFAERLQYETVLKEKLDQGINV 93
>gi|169616051|ref|XP_001801441.1| hypothetical protein SNOG_11197 [Phaeosphaeria nodorum SN15]
gi|160703101|gb|EAT81696.2| hypothetical protein SNOG_11197 [Phaeosphaeria nodorum SN15]
Length = 105
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 131 MDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL 186
M + WC +P+ GLP+PD + ++ + +R G+G E+YE+ + Q +V E +E L
Sbjct: 1 MTLEWCRKPDVGLPRPDLCVFLDISADDAAKRGGYGTEKYEKKEMQDRVRELFETL 56
>gi|408421136|ref|YP_006762550.1| thymidylate kinase Tmk [Desulfobacula toluolica Tol2]
gi|405108349|emb|CCK81846.1| Tmk: thymidylate kinase [Desulfobacula toluolica Tol2]
Length = 238
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 22/124 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS-TGHIIDEYLRKKIELPDQ 68
FIV EG D +GK+TQ K L +Y NKN I ++++FP G +I ++LR + D
Sbjct: 12 FIVIEGLDGAGKSTQIKLLKNYFNKNEIKYKYLHFPRSGEGYYGDLIAKFLRGEFGSLDS 71
Query: 69 A----AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L+++ +R + + +T +E + + DRY +S +AF
Sbjct: 72 VDPYLVALIYAGDRDDAKKKITGWLENKYFVIV-----------------DRYVYSNIAF 114
Query: 125 SAAK 128
AK
Sbjct: 115 QCAK 118
>gi|403291588|ref|XP_003936865.1| PREDICTED: thymidylate kinase [Saimiri boliviensis boliviensis]
Length = 140
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 106 KNLDQGCT--NDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRK 163
+ L QG T DRY+FSGVAFS AKE L DA +R
Sbjct: 37 EKLSQGVTLVMDRYAFSGVAFSGAKE-------------LQLADAA-----------KRS 72
Query: 164 GFGDERYEQTDFQRKVAENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVI---DTIKK 217
FG ERYE FQ + + + +L + W +DA K I+ + +DI++ D I+
Sbjct: 73 AFGHERYENGAFQERALQCFHQLMRDTTVNWKVVDASKSIEA---VHEDILVLSEDAIRT 129
Query: 218 SQFSPL 223
+ PL
Sbjct: 130 ATEKPL 135
>gi|163755232|ref|ZP_02162352.1| thymidylate kinase [Kordia algicida OT-1]
gi|161324652|gb|EDP95981.1| thymidylate kinase [Kordia algicida OT-1]
Length = 206
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 74/187 (39%), Gaps = 26/187 (13%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ + FI EG D SGK+TQAK + L ++ F + G +I L + +
Sbjct: 1 MKKNIFIAIEGIDGSGKSTQAKNIAKRLEAEG-HKVYLTFEPTDMRIGKMIRSILGGQEK 59
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRYSFSGV 122
++ LF A+R + I+H + K L +G T DRY FS
Sbjct: 60 ADEKVIAALFVADRLDH---------------ILHETNGILKKLAEGYTVITDRYYFSSY 104
Query: 123 AFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRKGFGDER---YEQTDFQ 176
A+ A MD+ W Q K + KP + ++ E +R E YE D
Sbjct: 105 AYHGAH--MDMDWVIQSNKMAADILKPTVNIFVDVSPEVAMKRINANRETVEIYETLDNL 162
Query: 177 RKVAENY 183
+ V Y
Sbjct: 163 KAVQSQY 169
>gi|325982933|ref|YP_004295335.1| thymidylate kinase [Nitrosomonas sp. AL212]
gi|325532452|gb|ADZ27173.1| thymidylate kinase [Nitrosomonas sp. AL212]
Length = 208
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 30/217 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL- 65
+G F+ EG D +GK+TQ + + L + + + P T+ + L K I +
Sbjct: 3 QGKFLTLEGIDGAGKSTQLVWIAELLQRAGLSAVVTREPGGTLLGEQLRALLLDKFISMH 62
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
P+ A L+F+A R + + + QG Q +DR++ + A+
Sbjct: 63 PETEALLMFAARREHLDKVIFPALAQG-----------------QWVISDRFTDASFAYQ 105
Query: 126 AAKEGMDISWCF---QPEKGLPKPDAVLLFKLNEEALQRRKGFGD--ERY--EQTDFQRK 178
+ G+D + Q +G +PD L F + + Q+R G +R+ EQ DF +
Sbjct: 106 SGGRGLDSAKLVILEQWVQGALQPDLTLYFDVPADVGQQRVSRGGVVDRFEQEQADFFLR 165
Query: 179 VAENY----EKLKDNIWIDIDADKDIDTLGLIVKDIV 211
V Y ++ D I I ID+++ + + + V+ I+
Sbjct: 166 VRAAYLDRAQQFPDRIKI-IDSNRSLPEVKVAVEQIL 201
>gi|354603583|ref|ZP_09021581.1| thymidylate kinase [Alistipes indistinctus YIT 12060]
gi|353348963|gb|EHB93230.1| thymidylate kinase [Alistipes indistinctus YIT 12060]
Length = 226
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 33/168 (19%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST-GHIIDEYLRKKIELPDQ 68
FIV EG D +GK+TQ + L + L+ ++++FP G ++ +LR ++ DQ
Sbjct: 3 FIVLEGLDGAGKSTQVRMLQERLSAQGFAYEYLHFPRFDAPVYGELVARFLRGELGALDQ 62
Query: 69 A----AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L+++ +R E P + + +E G + + DRY +S V +
Sbjct: 63 VNPYLVALIYAGDRAEAAPMIRRWLEAGKFVIV-----------------DRYVYSNVGY 105
Query: 125 SAAK-------EGMDISWCFQPE---KGLPKPDAVLLFKLNEEALQRR 162
AK E + W E G+P+PD L + QR+
Sbjct: 106 QCAKIDDPADRERLR-EWIIDLEYGHNGIPQPDLSLFLDVPFSFTQRK 152
>gi|163867844|ref|YP_001609048.1| putative thymidylate kinase [Bartonella tribocorum CIP 105476]
gi|161017495|emb|CAK01053.1| putative thymidylate kinase [Bartonella tribocorum CIP 105476]
Length = 219
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G+F+V G D SGKTTQ +++ Y + Q P + +YL +
Sbjct: 19 GSFVVLCGFDGSGKTTQVQEISRYWAQEKHIIQTFQ-PSHWYRNNQEVRDYLESGKSIDP 77
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
LL + +R + TLEI+ SL + +N +DRY +S +A+ A
Sbjct: 78 LLLALLAATDRRKH------------TLEIIEPSLTSSQNF---IISDRYVYSSLAYFYA 122
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEA----LQRRKGFGDERYEQTDFQRKVAENY 183
+ G+ + + + +P+P L A LQ+R G + E+ F KV E Y
Sbjct: 123 R-GLSLESVIKLNQFIPRPCITFYLHLPPTAIIERLQKRDGLALKYEEKLSFIEKVYEVY 181
Query: 184 EKLK--DNIWIDIDADKDIDTL 203
+ L D +I ID I ++
Sbjct: 182 QLLSEIDERFIVIDGTASISSI 203
>gi|372272580|ref|ZP_09508628.1| thymidylate kinase [Marinobacterium stanieri S30]
Length = 225
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 32/160 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFP--DRTISTGHIIDEYLRKKI- 63
+G IV EG D SGK TQ+ +++ L+K + S+ ++FP D T G + YL K
Sbjct: 2 KGKIIVIEGIDGSGKNTQSNLILERLSKAGVKSEKISFPAYDETF-FGKEVGNYLNGKFG 60
Query: 64 ---ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
++ + A +L++ +R+E++ + + + +G L I DRY S
Sbjct: 61 GLDDVNPKLAAMLYAGDRFEKKDYINEKLSEGYILII-----------------DRYVPS 103
Query: 121 GVAFSAAK-----EGMDISWCFQPE---KGLPKPDAVLLF 152
+A A+K + W Q E +PKPD V+
Sbjct: 104 NIAHQASKLDNIERDVLADWINQLEYYVYKMPKPDLVIFL 143
>gi|452209698|ref|YP_007489812.1| Thymidylate kinase [Methanosarcina mazei Tuc01]
gi|452099600|gb|AGF96540.1| Thymidylate kinase [Methanosarcina mazei Tuc01]
Length = 167
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG I EG D SGK+T AKK+ + F P R TG ++ ++ +
Sbjct: 2 RGKLITLEGIDGSGKSTVAKKIQENPEIQVFDPVFTREPTRGTLTGTAVENAIQSET--- 58
Query: 67 DQAAHL-LFSANRWEREPTLTKLIEQGITLEIMHSSLENEKN-LDQGCTNDRYSFSGVAF 124
DQ A L LF+A+ E L KL++ +L N KN + ++ RY++ GV
Sbjct: 59 DQLAELFLFTADHAEH---LAKLVK---------PALANGKNVISDRYSDSRYAYQGVTL 106
Query: 125 SAAKEGMDISWCFQPEKGLP-KPDAVLLFKLNEEALQRRKGFGDERYEQTDFQR 177
+ E + W G PD LF + E R G +R EQT F++
Sbjct: 107 KSRFEN-PLEWVRSLHSGWTVVPDLTFLFDIEPEIAVERCG---KRGEQTKFEK 156
>gi|302349154|ref|YP_003816792.1| thymidylate kinase [Acidilobus saccharovorans 345-15]
gi|302329566|gb|ADL19761.1| Putative thymidylate kinase [Acidilobus saccharovorans 345-15]
Length = 214
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 80/189 (42%), Gaps = 35/189 (18%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+GA + EG D SG TT +K L L+ + + P G +I + L + P
Sbjct: 2 KGAIVALEGIDGSGITTHSKLLAQRLSSMGYRAIYTKEPTEG-PVGQVIRQLLAQGRPEP 60
Query: 67 DQAAHLLFSANR-WER--EPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSG 121
AA LLF+A+R W +P+L +M + L+QG DRY +S
Sbjct: 61 RLAA-LLFAADRSWHLCCDPSLPG--------GVMGA-------LEQGYVVVMDRYKYSS 104
Query: 122 VAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEAL-------QRRKGFGDERYEQTD 174
+A+ A G D W ++ P+ D ++ + E QRR+G YE
Sbjct: 105 IAYQGAS-GADPGWLWEVNSFAPEADLLIFIDVPVEVALSRVAERQRREG-----YEVEG 158
Query: 175 FQRKVAENY 183
F R+ E +
Sbjct: 159 FLRRAKERF 167
>gi|334738214|gb|AEH03646.1| thymidylate kinase [Pseudomonas phage PhiPA3]
Length = 362
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 25/225 (11%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
F+V EG + SGK++ K LV+ L N+P Q P T I + LRK E +Q
Sbjct: 9 FVVLEGDEFSGKSSVRKALVERLEALNVPHQVFREPGGTPFGEEIREILLRKGDEQINQV 68
Query: 70 AH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEK-NLDQGCTNDRYSFSGVAF-SA 126
+ LL A R + EI+ +LE K L + Y + V +
Sbjct: 69 SDILLHQAYRAQN------------VREIIKPALEAGKLVLSERFIISTYCLNVVPYLET 116
Query: 127 AKEGMDISWCFQP--EKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ--TDFQRKVAEN 182
E D+ P +G+P+P +L EE ++R G +RYE D KV++
Sbjct: 117 NPELQDLFMGTLPFVTQGIPEPITFMLRLPEEERMKRADGRKLDRYEDMPADHVAKVSKA 176
Query: 183 YEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLESNK 227
Y +L+ +++DA + I+ + D ++D + +QF E+ +
Sbjct: 177 YRELQLPSMVEVDATQSIEK----IVDFILDVL--TQFDDRETQR 215
>gi|374856996|dbj|BAL59849.1| dTMP kinase [uncultured candidate division OP1 bacterium]
Length = 212
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 21/187 (11%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FIVFEG D SGK+TQ + L L + I + P T HI L + + +
Sbjct: 5 GVFIVFEGIDGSGKSTQLRALSQRLQQYGIDPVVIREPGGTPVGEHIRQILLERPVGMEP 64
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
L+ A+R E +T ++ +LE + +DR++ + +A+
Sbjct: 65 LTELFLYEASRSE------------LTRTVLRPALEAGRV----VLSDRFAMASLAYQGY 108
Query: 128 KEGMDISWCFQ----PEKGLPKPDAVLLFKLNEEALQR-RKGFGDERYEQTDFQRKVAEN 182
G+D + + G+ ++L E AL R R+ F +F +V
Sbjct: 109 GRGLDFTLVQKFNTIATDGIEPSLTIILDVPVEVALARKRQAFDRLERAGREFHERVRRG 168
Query: 183 YEKLKDN 189
Y++L +
Sbjct: 169 YQELARH 175
>gi|73663583|ref|YP_302364.1| thymidylate kinase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123641634|sp|Q49UZ1.1|KTHY_STAS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|72496098|dbj|BAE19419.1| thymidylate kinase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 205
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 33/208 (15%)
Query: 9 AFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQ 68
AFI FEG + SGKTT +++ L N S + + TG I E L + ++ D+
Sbjct: 3 AFITFEGPEGSGKTTVIQQVAQKL--ENQYSVVLTREPGGVKTGEQIREVLLEGDDMDDR 60
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
LLF+A+R RE + K+I SLEN K + DRY S +A+
Sbjct: 61 TEALLFAASR--REHLVGKVI----------PSLENGKLV----LCDRYIDSSLAYQGYA 104
Query: 129 EGMDISWCFQPEK----GLPKPDAVLLFKLNEEALQRRKGFGDER------YEQTDFQRK 178
G+ I + GL PD + ++ A+ R + ++R E F K
Sbjct: 105 RGIGIEEVKSINEFAINGL-YPDITIYLDVS-VAVGRERILKNQRNQNRLDQEDVKFHEK 162
Query: 179 VAENYEKLKDN---IWIDIDADKDIDTL 203
V E Y+K+ N +I I+AD+ ID +
Sbjct: 163 VVEGYKKIIHNESERFIVIEADRSIDEV 190
>gi|159906007|ref|YP_001549669.1| thymidylate kinase [Methanococcus maripaludis C6]
gi|238686994|sp|A9AAR4.1|KTHY_METM6 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|159887500|gb|ABX02437.1| dTMP kinase [Methanococcus maripaludis C6]
Length = 199
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 91/211 (43%), Gaps = 38/211 (18%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D GKTTQAK + + LN ++F F G I E L + +
Sbjct: 4 FIVFEGIDGCGKTTQAKLIAERLN-----AKF-TFEPTDGKIGKSIREILSGS-KCQKET 56
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R E H S E +DRY +S + + + +
Sbjct: 57 LALLFAADRVE------------------HVSKIEEDLKKSHIVSDRYVYSSIVYQMS-Q 97
Query: 130 GM--DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLK 187
G+ D + P +L LN EAL+R + E +E+ + Q+K+ E Y L
Sbjct: 98 GIPKDFIYTINDYAKTPDLVVLLDVDLN-EALKRMESREKEIFEKIEIQKKIKEGYYSL- 155
Query: 188 DNIWIDIDADKDIDTLGLIVKDIVIDTIKKS 218
I+ + +K + T G I+IDT KS
Sbjct: 156 ----INSENEKFMPTYGF----IIIDTTSKS 178
>gi|339499964|ref|YP_004697999.1| Thymidylate kinase [Spirochaeta caldaria DSM 7334]
gi|338834313|gb|AEJ19491.1| Thymidylate kinase [Spirochaeta caldaria DSM 7334]
Length = 218
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 83/214 (38%), Gaps = 35/214 (16%)
Query: 10 FIVFEGCDRSGKTTQAK----KLVDYLNK-------NNIPSQFVNFPDRTISTGHIIDEY 58
F+V EG D +G +TQ + +L + +K P+ F G +I +
Sbjct: 6 FVVLEGGDGTGTSTQLQILQNRLASFASKEGNSSSGQQNPATHFTFEPTDGPIGTLIRQA 65
Query: 59 LRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
L + L LF+A+R+E E GI L DRY
Sbjct: 66 LHRSPALQHHTIAHLFAADRYEH-----LYNESGIVARCHRGEL---------VICDRYV 111
Query: 119 FSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER--YEQTDFQ 176
S + + G D P P+ +L F+L+ E ++R D + +E FQ
Sbjct: 112 PSSLVYQGLACGDDTPAYLNSR--FPCPELILFFELDPEVAEQRYKRRDTQDMFEHLAFQ 169
Query: 177 RKVAENYEKL------KDNIWIDIDADKDIDTLG 204
++V E YE++ + + IDA K ID +
Sbjct: 170 KQVHEAYERILPAYCAQGTTLVRIDAAKSIDEVA 203
>gi|383456662|ref|YP_005370651.1| thymidylate kinase [Corallococcus coralloides DSM 2259]
gi|380734505|gb|AFE10507.1| thymidylate kinase [Corallococcus coralloides DSM 2259]
Length = 218
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 33/190 (17%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP- 66
G FIV EG D +G TTQ ++L L + + P G ++ + L ++ LP
Sbjct: 11 GRFIVLEGLDGAGTTTQTERLASALRADGLSVVTTREPSDG-PVGTMLRQALTGRLGLPQ 69
Query: 67 ------DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYS 118
+ LLF+A+R + H L+QG DRY
Sbjct: 70 GRGPLAQETLALLFAADRTD------------------HLHARVLPALEQGKVVLCDRYV 111
Query: 119 FSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR---KGFGDERYEQTDF 175
S +A+ A + ++W PD L ++ + +R +G E +E +
Sbjct: 112 LSSLAYQGAS--LPMAWVDTVNAHAVSPDLTLFVGVDPKVAAKRRAVRGGPAELFEADEA 169
Query: 176 QRKVAENYEK 185
QR++A+ Y K
Sbjct: 170 QRRIAKQYLK 179
>gi|51246661|ref|YP_066545.1| thymidylate kinase [Desulfotalea psychrophila LSv54]
gi|59798232|sp|Q6AJE2.1|KTHY_DESPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|50877698|emb|CAG37538.1| related to thymidylate kinase [Desulfotalea psychrophila LSv54]
Length = 202
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 85/209 (40%), Gaps = 25/209 (11%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G I+FEG D +GK+TQ K L +YL + +F G I + + ++
Sbjct: 6 GKLIIFEGTDGAGKSTQIKMLANYLRSKGL-DVIASFEPTNGPYGQKIRQLYTDRNKVTR 64
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
LF A+R E + KLI I+ + DRY S A+ A
Sbjct: 65 NEELELFLADRREH---VNKLINPAIS-------------AGKIVLCDRYYLSTAAYQGA 108
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR----KGFGDERYEQTDFQRKVAENY 183
G D+ Q P PD LL ++ E +RR +G +E+ + KV+ +
Sbjct: 109 L-GFDVEEILQRNSFAPTPDLALLLQIPVEDGRRRITSSRGEETNDFEKAEMLEKVSTIF 167
Query: 184 EKLKDNIWIDIDADKDIDTLGLIVKDIVI 212
L I+A + ID + +DI++
Sbjct: 168 NSLSFPYIRHINACQSIDN---VQRDIIM 193
>gi|339483004|ref|YP_004694790.1| Thymidylate kinase [Nitrosomonas sp. Is79A3]
gi|338805149|gb|AEJ01391.1| Thymidylate kinase [Nitrosomonas sp. Is79A3]
Length = 208
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 25/187 (13%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ +G FI EG D +GK+TQ +V+ L + + + P T + L K I
Sbjct: 1 MKQGKFITLEGIDGAGKSTQLAWIVELLQRAGLNTVVTREPGGTPLGEQLRTLLLDKSIT 60
Query: 65 L-PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+ P+ A L+F+A R + + + QG Q +DR++ + A
Sbjct: 61 MHPETEALLMFAARREHLDKVILPALTQG-----------------QWVISDRFTDASFA 103
Query: 124 FSAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLNEEALQRR----KGFGDERYEQTDFQ 176
+ + G+D ++ Q +G +PD L F + E Q+R K EQ DF
Sbjct: 104 YQSGGRGLDGGKLAILEQWVQGKLQPDLTLYFDVPVEVGQQRVSQIKSVDRFEKEQADFF 163
Query: 177 RKVAENY 183
++V Y
Sbjct: 164 QRVRAAY 170
>gi|359767090|ref|ZP_09270883.1| thymidylate kinase [Gordonia polyisoprenivorans NBRC 16320]
gi|378718987|ref|YP_005283876.1| thymidylate kinase Tmk [Gordonia polyisoprenivorans VH2]
gi|359315464|dbj|GAB23716.1| thymidylate kinase [Gordonia polyisoprenivorans NBRC 16320]
gi|375753690|gb|AFA74510.1| thymidylate kinase Tmk [Gordonia polyisoprenivorans VH2]
Length = 219
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 85/234 (36%), Gaps = 53/234 (22%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFP--------DRTISTGHIIDEYL 59
G I EG D +GK T LV + + V FP D H L
Sbjct: 2 GRLIAVEGLDGAGKNTLVTGLVRRWRERGVAVATVTFPRYHQSLFADVAAEALHGEHGDL 61
Query: 60 RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
R+ + A LLF+ +R P + +E + DRY
Sbjct: 62 RESV----YAMALLFALDRSAAAPEIRAALES-----------------NDVVVADRYVA 100
Query: 120 SGVAFSAAK-----EGMDISWCFQPEKG---LPKPDAVLLFKLNEEALQRR---KGFGD- 167
S A+SAA+ +G + W E G LP+PD L ++ + R + GD
Sbjct: 101 SNAAYSAARLAQSADGEVVRWVHDLEFGRLDLPRPDHTLFLAVSADVAMSRAQARSAGDP 160
Query: 168 ----ERYEQ-TDFQRKVAENYEKLKDNIW-------IDIDADKDIDTLGLIVKD 209
+ YE+ D QR+V Y +L + W D + ID LG V D
Sbjct: 161 TRPRDHYERDADLQRRVDATYRELARSGWASPWTEVADAAPETLIDLLGAGVDD 214
>gi|335427989|ref|ZP_08554909.1| thymidylate kinase [Haloplasma contractile SSD-17B]
gi|334893915|gb|EGM32124.1| thymidylate kinase [Haloplasma contractile SSD-17B]
Length = 213
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 34/225 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FI EG D +GKTT K++ + L NI P G I E +R+ I P
Sbjct: 2 KGLFITIEGPDGAGKTTVIKEVSNRLVNKNITHILTREP-----GGIDISEQIRRIILNP 56
Query: 67 ------DQAAHLLFSANRWEREPTLTKLI------EQGITLEIMHSSLENEKNLDQGCTN 114
++ LL++A+R R+ + K++ + + + SSL + + +
Sbjct: 57 ENTKMDERTEALLYAASR--RQHLVEKIVPAVTSGKHVLCDRFVDSSLAYQGYAREIGID 114
Query: 115 DRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTD 174
D YS + A + I PE GL + +A +++ L R E+ D
Sbjct: 115 DVYSVNQFAIDDMLPDLTIYLDINPEVGLARINA----GRSKDKLDRLD------MEKLD 164
Query: 175 FQRKVAENY----EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
F KV E Y E+ KD I + +DA K+ID + V+ I++ TI
Sbjct: 165 FHMKVHEGYSIINERFKDRI-VKVDASKEIDQVVHEVEAIILKTI 208
>gi|124005922|ref|ZP_01690760.1| thymidylate kinase [Microscilla marina ATCC 23134]
gi|123988605|gb|EAY28246.1| thymidylate kinase [Microscilla marina ATCC 23134]
Length = 232
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 53/124 (42%), Gaps = 22/124 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS-TGHIIDEYLRKKIELPDQ 68
FIV EG D SGK+TQ K + +L I Q ++FP G + E+LR + DQ
Sbjct: 7 FIVIEGLDGSGKSTQLKLITAHLQNAGIKYQHIHFPVMGEGYYGQLTAEFLRGDLGALDQ 66
Query: 69 A----AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
A L+F+ NR E + + + G + DRY S +AF
Sbjct: 67 VHPKIAALIFAGNRVEHLEQINQWLADGYVV-----------------IADRYVNSNIAF 109
Query: 125 SAAK 128
AK
Sbjct: 110 QCAK 113
>gi|20093219|ref|NP_619294.1| thymidylate kinase [Methanosarcina acetivorans C2A]
gi|23821774|sp|Q8THS9.1|KTHY_METAC RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|19918569|gb|AAM07774.1| thymidylate kinase Tmk [Methanosarcina acetivorans C2A]
Length = 206
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG I EG D SGK+T AKKL + F P R TG+ ++ ++
Sbjct: 2 RGKLITLEGIDGSGKSTVAKKLQENSELRVFEPVFTREPTRGTLTGNAVENAIQSDT--- 58
Query: 67 DQAAHL-LFSANRWEREPTLTKLIEQGITLEIMHSSLENEKN-LDQGCTNDRYSFSGVAF 124
DQ A L LF+A+ E L KL++ +LE+ K + ++ RY++ G+
Sbjct: 59 DQLAELFLFTADHAEH---LAKLVK---------PALEDGKTVISDRYSDSRYAYQGITL 106
Query: 125 SAAKEGMD--ISWCFQPEKGLPK-PDAVLLFKLNEEALQRRKGFGDERYEQTDFQR 177
K +D + W +G PD LF + E +R G +R EQT F++
Sbjct: 107 ---KNRLDNPLEWVRDLHRGWTVIPDLTFLFDIEPEIAVKRCG---KRGEQTKFEK 156
>gi|291278502|ref|YP_003495337.1| dTMP kinase [Deferribacter desulfuricans SSM1]
gi|290753204|dbj|BAI79581.1| dTMP kinase [Deferribacter desulfuricans SSM1]
Length = 215
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKI 63
I + F+V +G D GKTTQ K L +YLN + P T TG I+ L
Sbjct: 4 IKKSFFLVIDGIDGCGKTTQCKLLKEYLNNIGLNILLTKEPGGT-KTGTILRNILISTDY 62
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
++ LL+SA+R E + K+I G+ N + DR+ S A
Sbjct: 63 DIEPNTELLLYSADRLEHQK---KIIIPGL-------------NSGKTIICDRFISSTYA 106
Query: 124 FSAAKEGMDISWC--FQPEKGLPKPDAVLLFKLN-----EEALQRRKGFGDERYE----- 171
+ G++ S+ + PD ++ L E AL+R K E E
Sbjct: 107 YQIFARGLEKSFLQYLEQHTVFKWPDLTIIIDLPVEIALERALKRLKDQNCENSEGKFEK 166
Query: 172 -QTDFQRKVAEN---YEKLKDNIWIDIDADKDIDTLGLIVKDIV 211
DF +KV E Y K N+ + I+ D+DID+L +K IV
Sbjct: 167 NGIDFYKKVREGFLWYSKNYKNVKV-INGDRDIDSLFKEIKSIV 209
>gi|290967771|ref|ZP_06559324.1| dTMP kinase [Megasphaera genomosp. type_1 str. 28L]
gi|335049958|ref|ZP_08542939.1| dTMP kinase [Megasphaera sp. UPII 199-6]
gi|290782130|gb|EFD94705.1| dTMP kinase [Megasphaera genomosp. type_1 str. 28L]
gi|333761865|gb|EGL39391.1| dTMP kinase [Megasphaera sp. UPII 199-6]
Length = 232
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 83/204 (40%), Gaps = 41/204 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
+G IV EG D SGK TQA L LN+ P V FPD + ++ YL+ +
Sbjct: 2 KGKLIVIEGGDGSGKATQADLLYRRLNREGKPVYKVTFPDYDSPSSMLVKMYLQGQFGKQ 61
Query: 64 --ELPDQAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ AA ++ +R+ K L+ QG + DRY+ S
Sbjct: 62 ADSVNPYAASTFYAVDRFASYQMKWKTLLAQGYII-----------------IADRYTTS 104
Query: 121 GVAF--------SAAKEGMDISWCFQPEK-GLPKPDAVLL----FKLNEEALQRRKG--- 164
+ + +A + +D W F+ K GLP PD V+L + E + R+G
Sbjct: 105 NMLYQMIKISAPAARQTYLDWLWDFEFIKMGLPIPDIVILLDVPLAVTETLMAARQGKTG 164
Query: 165 --FGDERYEQTDFQRKVAENYEKL 186
GD + F ++ YE+L
Sbjct: 165 GETGDIHEKNRAFLQQCHAAYEEL 188
>gi|326202926|ref|ZP_08192793.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782]
gi|325987003|gb|EGD47832.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782]
Length = 206
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 88/219 (40%), Gaps = 39/219 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FI EG D SGKTTQ K + ++L P G I E +R I P
Sbjct: 3 KGLFITVEGTDGSGKTTQIKLMEEFLKAAGNDVVLSREPG-----GTEISETIRNLILDP 57
Query: 67 DQ------AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
LL++A R + +++ SLE+ K + DR+ S
Sbjct: 58 GNKDISPLTEMLLYAAARAQH------------VFQVIRPSLESGKCV----ICDRFVDS 101
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPK---PDAVLLFKLNEE-ALQRR-KGFGDERYEQ--T 173
A+ G+D+ + PD ++ A++RR K G +R EQ
Sbjct: 102 SYAYQGCGRGVDLKTVADVNRAAVDGVVPDITFFLNIDPRLAIERRIKSTGADRIEQEKM 161
Query: 174 DFQRKVAENYEKLK----DNIWIDIDADKDIDTLGLIVK 208
DF +V E Y K+ D I IDA K I+ + L +K
Sbjct: 162 DFHMRVYEGYRKMALLYPDRIK-SIDASKSIEEISLQIK 199
>gi|328950279|ref|YP_004367614.1| thymidylate kinase [Marinithermus hydrothermalis DSM 14884]
gi|328450603|gb|AEB11504.1| Thymidylate kinase [Marinithermus hydrothermalis DSM 14884]
Length = 202
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 73/184 (39%), Gaps = 24/184 (13%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FI FEG + SGK+TQA L +L + + P T G + ++L + P
Sbjct: 4 GFFITFEGPEGSGKSTQAAHLAAWLRQQGVSVVVTREPGGT-PLGRAVRQWLLSESMDP- 61
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
LL++A+R E ++ +L Q +DR+ S A+
Sbjct: 62 VTEFLLYTADRAEH------------VRHVIRPALAA----GQVVISDRFVDSSYAYQGF 105
Query: 128 KEGMDISW---CFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTD--FQRKVAEN 182
G+D+ W QP PD L L E RK D R EQ F R+V E
Sbjct: 106 GRGLDLEWLRAVSQPVLEGLVPDVTFLLDLPPEVGLARKAERD-RLEQESLAFHRRVREG 164
Query: 183 YEKL 186
Y L
Sbjct: 165 YRVL 168
>gi|304390265|ref|ZP_07372219.1| thymidylate kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315657530|ref|ZP_07910412.1| thymidylate kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|304326747|gb|EFL93991.1| thymidylate kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|315492002|gb|EFU81611.1| thymidylate kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 239
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 37/206 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G F+ FEGCD GKTTQ + ++ + P T G + + L ++
Sbjct: 30 QGLFVAFEGCDGVGKTTQITRAASWVREQGWDVVETREPGGT-DLGVALRQLLLDAGDVS 88
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS- 125
+A LLF+A+R + + KLI I N + DRY S +A+
Sbjct: 89 PRAEALLFAADRAQH---VHKLIIPAI-------------NDGKVVITDRYLASSIAYQG 132
Query: 126 -----AAKEGMDIS-WCFQPEKGLPKPDAVLLFKLNEEALQRRKGF-----GDERYEQT- 173
A+E D+S W G P+ +L L+ E R+ G +R E+
Sbjct: 133 HGRELGAREIRDLSLWA----TGGLVPNLTVLLDLDPEVAAERQAADASLGGPDRMERAG 188
Query: 174 -DFQRKVAENYEKLKD--NIWIDIDA 196
+FQ++V E++ ++ + + W+ +DA
Sbjct: 189 IEFQKRVREDFLRMSEGQDTWLVVDA 214
>gi|298345977|ref|YP_003718664.1| dTMP kinase [Mobiluncus curtisii ATCC 43063]
gi|298236038|gb|ADI67170.1| dTMP kinase [Mobiluncus curtisii ATCC 43063]
Length = 239
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 37/206 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G F+ FEGCD GKTTQ + ++ + P T G + + L ++
Sbjct: 30 QGLFVAFEGCDGVGKTTQIARAASWVREQGWDVVETREPGGT-DLGVALRQLLLDAGDVS 88
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS- 125
+A LLF+A+R + + KLI I N + DRY S +A+
Sbjct: 89 PRAEALLFAADRAQH---VHKLIIPAI-------------NDGKVVITDRYLASSIAYQG 132
Query: 126 -----AAKEGMDIS-WCFQPEKGLPKPDAVLLFKLNEEALQRRKGF-----GDERYEQT- 173
A+E D+S W G P+ +L L+ E R+ G +R E+
Sbjct: 133 HGRELGAREIRDLSLWA----TGGLVPNLTVLLDLDPEVAAERQAADASLGGPDRMERAG 188
Query: 174 -DFQRKVAENYEKLKD--NIWIDIDA 196
+FQ++V E++ ++ + + W+ +DA
Sbjct: 189 IEFQKRVREDFLRMSEGQDTWLVVDA 214
>gi|313900951|ref|ZP_07834441.1| dTMP kinase [Clostridium sp. HGF2]
gi|373123484|ref|ZP_09537330.1| thymidylate kinase [Erysipelotrichaceae bacterium 21_3]
gi|422325700|ref|ZP_16406728.1| thymidylate kinase [Erysipelotrichaceae bacterium 6_1_45]
gi|312954371|gb|EFR36049.1| dTMP kinase [Clostridium sp. HGF2]
gi|371660817|gb|EHO26061.1| thymidylate kinase [Erysipelotrichaceae bacterium 21_3]
gi|371667448|gb|EHO32573.1| thymidylate kinase [Erysipelotrichaceae bacterium 6_1_45]
Length = 210
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 89/215 (41%), Gaps = 41/215 (19%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FI FEG D SGKTT +K + L + P + P G I E +R I P
Sbjct: 3 KGLFITFEGNDGSGKTTISKLAYEKLKEMGYPVLYTREPG-----GIDIAEQIRSIILDP 57
Query: 67 DQAAH------LLFSANRWER--EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
A LL++A+R + E L L E I L C DR+
Sbjct: 58 ANTAMDERCEALLYAASRRQHLIEKVLPALKEGKIVL----------------C--DRFV 99
Query: 119 FSGVAFSAAKEGMDISWCFQPEKGLPK---PDAVLLFKLN-EEALQRRKGFGDERY---E 171
S + + G+ + F + + PDA + ++ E L R G++ E
Sbjct: 100 DSSLVYQGIARGIGVEEVFAINQFAIEGHLPDATVFLSVDFETGLSRVTSRGNKDRLDNE 159
Query: 172 QTDFQRKVAENYEKLKDNI---WIDIDADKDIDTL 203
+F + VA+ YE +KD +DA+ D+DT+
Sbjct: 160 SMEFHKLVAQGYELIKDKFKERMHIVDANPDVDTV 194
>gi|255658922|ref|ZP_05404331.1| dTMP kinase [Mitsuokella multacida DSM 20544]
gi|260848872|gb|EEX68879.1| dTMP kinase [Mitsuokella multacida DSM 20544]
Length = 250
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 32/170 (18%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
+G I+ E D SGK TQ K L D+L + + FPD + ++ YLR
Sbjct: 4 KGKLIIIEAGDGSGKATQTKALYDHLCREGYRVHRIEFPDYAADSSMLVRMYLRGDFGGH 63
Query: 64 --ELPDQAAHLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
++ AA F+ +R+ K E G + DRY+ S
Sbjct: 64 AEDVNAYAASTFFAVDRYASYRMKWKKAYEAGAII-----------------LADRYTTS 106
Query: 121 GVAFSAAK--------EGMDISWCFQPEK-GLPKPDAVLLFKLNEEALQR 161
+ A K +D W F+ K GLP PD V+ ++ E R
Sbjct: 107 NMVHQAVKLTDRKEREAFLDWLWDFEFHKLGLPVPDKVVFLDMDPEVADR 156
>gi|257066619|ref|YP_003152875.1| thymidylate kinase [Anaerococcus prevotii DSM 20548]
gi|256798499|gb|ACV29154.1| thymidylate kinase [Anaerococcus prevotii DSM 20548]
Length = 209
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 47/230 (20%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI---- 63
G IVFEG D SGKTT ++ L K+ I ++++F + G I E +R+ I
Sbjct: 3 GKLIVFEGPDGSGKTTVINEVKKRLKKDQI--EYLDFRE---PGGTPISEKIREIIIDND 57
Query: 64 --ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
++ + LLF+A+R +LIE+ I +LE K + DR+ S
Sbjct: 58 NEDMTSRCECLLFAASR-------AQLIEEKI-----RPALEKGKLV----ICDRFVLSS 101
Query: 122 VAFSAAKEGMDISWC-----FQPEKGLPKPDAVLLFKLNEEA--LQRRKGFGDERYEQT- 173
+ + G+ I F E K D + F ++ + +++R F +R E
Sbjct: 102 LLYQGVGRGLGIEKVKVINDFATEN--TKADLTIFFDIDYKTALVRKRANFSADRLESED 159
Query: 174 -DFQRKVAENY----EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKS 218
DF RK+ + Y E+ KD I +DA K ID V D V++ I KS
Sbjct: 160 FDFHRKIFDAYLDITERYKDEIK-RVDATKSIDE----VTDQVMELIYKS 204
>gi|209527775|ref|ZP_03276269.1| dTMP kinase [Arthrospira maxima CS-328]
gi|376001374|ref|ZP_09779244.1| thymidylate kinase [Arthrospira sp. PCC 8005]
gi|423066619|ref|ZP_17055409.1| dTMP kinase [Arthrospira platensis C1]
gi|209491808|gb|EDZ92169.1| dTMP kinase [Arthrospira maxima CS-328]
gi|375330203|emb|CCE14997.1| thymidylate kinase [Arthrospira sp. PCC 8005]
gi|406711927|gb|EKD07125.1| dTMP kinase [Arthrospira platensis C1]
Length = 231
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 46/231 (19%)
Query: 8 GAFIVFEGCDRSGKTTQAKK----LVDYLNKNNIPS--------QFVNFPDRTISTGHII 55
G IVFEG + GKTTQ ++ L D L+ N+ Q P T H+
Sbjct: 3 GKLIVFEGIEGCGKTTQIQQIQPWLADRLSLNHSSGGKLHQRGVQVTREPGGTQLGQHLR 62
Query: 56 DEYLRKKIELP--DQAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGC 112
D L I P D++ LL++A+R + TL K L++QG +
Sbjct: 63 DLLLHHDIREPLSDRSELLLYAADRAQHIETLIKPLLDQGTII----------------- 105
Query: 113 TNDRYSFSGVAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEA----LQRRKGF 165
DR++ S +A+ G+D+ Q + G PD L + EA ++ RK
Sbjct: 106 LCDRFTDSTLAYQGYGRGLDLQQIHQINQIATGGVVPDLTLWLNVPVEAGLTRIKARKKV 165
Query: 166 GDERYEQTD--FQRKVAENY---EKLKDNIWIDIDADKDIDTLGLIVKDIV 211
+R EQ D F +VAE + K+ + ID + D D + +++I+
Sbjct: 166 --DRIEQADLEFHYRVAEGFATLAKMYPQRIVPIDGNGDRDRVTQQIQNIL 214
>gi|342215455|ref|ZP_08708102.1| dTMP kinase [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341586345|gb|EGS29745.1| dTMP kinase [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 203
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 87/202 (43%), Gaps = 26/202 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FIV EG D SGK+T A KL DY ++ P T I D LRK+ E
Sbjct: 2 KGKFIVLEGSDGSGKSTLAGKLKDYYDQRGAKVLLTREPGGTDLGEEIRDMILRKQGEEM 61
Query: 67 D-QAAHLLFSANRWERE-PTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D + LL++A+R E + +E+G + +RY S +A+
Sbjct: 62 DPRTEALLYAASRAEHVFKKIKPAVEEGYIV-----------------LCERYILSSLAY 104
Query: 125 SAAKEGMDISWCFQPEK---GLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTD--FQRK 178
+ + + G +PD K++ ++ LQR+ G +R E F ++
Sbjct: 105 QGYGRELGPQEVLKINEFATGSFRPDVTFYLKVDWQKTLQRKIDQGGDRLELAGDAFFKR 164
Query: 179 VAENYEKLKDNIWIDI-DADKD 199
V E Y+ L + I + DA K+
Sbjct: 165 VQEGYQALAQSKGIHVLDAGKN 186
>gi|313891688|ref|ZP_07825295.1| dTMP kinase [Dialister microaerophilus UPII 345-E]
gi|313119966|gb|EFR43151.1| dTMP kinase [Dialister microaerophilus UPII 345-E]
Length = 224
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 41/202 (20%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI---- 63
G IV EG D SGK TQ++ L + L KNN V FPD + ++ YL
Sbjct: 3 GKLIVLEGIDGSGKATQSQLLAEALKKNNKSVIQVTFPDYESQSSSLVKMYLNGNFGTAP 62
Query: 64 -ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFS 120
++ AA + ++ +R+ ++ EK +QG DRY+ S
Sbjct: 63 EDVNPYAASMFYAVDRFAS------------------YKMKWEKFYEQGGIVIADRYTTS 104
Query: 121 GVAFSAAKEGMD------ISWCFQPEK---GLPKPDAVLL----FKLNEEALQRRK---G 164
+ K + + W + E GLP PD V+L +++E+ ++ R G
Sbjct: 105 NMVHQMTKYDNEDEREKFLKWLEETEYKILGLPTPDMVILLDVPLEISEKLVKERALSGG 164
Query: 165 FGDERYEQTDFQRKVAENYEKL 186
D + D+ K ++Y+ L
Sbjct: 165 NMDIHEKHLDYLHKCYDSYQWL 186
>gi|337287768|ref|YP_004627240.1| Thymidylate kinase [Thermodesulfobacterium sp. OPB45]
gi|334901506|gb|AEH22312.1| Thymidylate kinase [Thermodesulfobacterium geofontis OPF15]
Length = 392
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 27/203 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--E 64
+G I EG D +GKTT AK L + L K I F P G I L KKI E
Sbjct: 190 KGKLIAIEGIDGAGKTTFAKALFETLKKRGINCIFSCEPTSG-PFGEKIKSALIKKIKKE 248
Query: 65 LPDQAAHLLFSANR-WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
Q LLF +R W E I+ +LE +K + DRY S +A
Sbjct: 249 SNPQDLKLLFLKDRKWHVE-------------NIIIPALEAQKWI----ILDRYYPSTLA 291
Query: 124 FSAAKEGMDIS-WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER---YEQTDFQRKV 179
+ ++ +G+ + + E P PD V+ L E +R G +++ +E+ +F +V
Sbjct: 292 YQSS-QGLSLKELLIENETIAPIPDLVIYLDLPLEIAFKRIGNREKKLTIFEKREFLERV 350
Query: 180 AENYEK-LKDNIWIDIDADKDID 201
E Y+K LK ++ IDA K I+
Sbjct: 351 METYKKCLKLFNYLIIDATKPIE 373
>gi|346314857|ref|ZP_08856374.1| thymidylate kinase [Erysipelotrichaceae bacterium 2_2_44A]
gi|345905795|gb|EGX75532.1| thymidylate kinase [Erysipelotrichaceae bacterium 2_2_44A]
Length = 210
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 88/215 (40%), Gaps = 41/215 (19%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FI FEG D SGKTT +K + L P + P G I E +R I P
Sbjct: 3 KGLFITFEGNDGSGKTTISKLAYEKLKAMGYPVLYTREPG-----GIDIAEQIRSIILDP 57
Query: 67 DQAAH------LLFSANRWER--EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
A LL++A+R + E L L E I L C DR+
Sbjct: 58 ANTAMDERCEALLYAASRRQHLIEKVLPALKEGKIVL----------------C--DRFV 99
Query: 119 FSGVAFSAAKEGMDISWCFQPEKGLPK---PDAVLLFKLN-EEALQRRKGFGDERY---E 171
S + + G+ + F + + PDA + ++ E L R G++ E
Sbjct: 100 DSSLVYQGIARGIGVEEVFAINQFAIEGHLPDATVFLSVDFETGLSRVTSRGNKDRLDNE 159
Query: 172 QTDFQRKVAENYEKLKDNI---WIDIDADKDIDTL 203
+F + VA+ YE +KD +DA+ D+DT+
Sbjct: 160 SMEFHKLVAQGYELIKDKFKERMHIVDANPDVDTV 194
>gi|297572230|ref|YP_003698004.1| thymidylate kinase [Arcanobacterium haemolyticum DSM 20595]
gi|296932577|gb|ADH93385.1| thymidylate kinase [Arcanobacterium haemolyticum DSM 20595]
Length = 219
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FI FEG D +GK+TQ +KL +L + P T H I L ++
Sbjct: 2 GMFISFEGGDGAGKSTQVEKLATWLREAGYGVVVTREPGGTELGAH-IRHLLLHGGDVSP 60
Query: 68 QAAHLLFSANRWEREPT-LTKLIEQG---ITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+A LL++A+R T + +E+G IT M SS+ ++ G A
Sbjct: 61 RAEALLYAADRAHHMDTKIRPALERGEIVITDRFMDSSI---------------AYQGAA 105
Query: 124 FSAAK-EGMDIS-WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ--TDFQRKV 179
S K E D+S W + PD L + E Q R G +R E +F +V
Sbjct: 106 RSLGKNEIRDLSLWAVEG----TMPDVTFLLDIPVETGQARVGSEQDRLEAAGAEFHARV 161
Query: 180 AENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKS 218
+ L ++ W +D + ID++ ++ V + + K+
Sbjct: 162 RNEFLALAEDHMDRWRVLDGTQTIDSIAQSIRHHVAEALAKN 203
>gi|375149477|ref|YP_005011918.1| thymidylate kinase [Niastella koreensis GR20-10]
gi|361063523|gb|AEW02515.1| Thymidylate kinase [Niastella koreensis GR20-10]
Length = 209
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 91/216 (42%), Gaps = 38/216 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI EG D SGK+TQ K L + L N + F G +I + L+ + +
Sbjct: 8 FIALEGIDGSGKSTQTKLLTEQLT-NQGHKVYSTFEPTNNQIGKLIRDILKGNTKADYRI 66
Query: 70 AHLLFSANRWER----EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
LF A+R + E + K + +G T+ IM DRY FS A+
Sbjct: 67 IAGLFVADRLDHLLNEEYGIVKKLAEGYTV-IM----------------DRYYFSSYAYQ 109
Query: 126 AAKEGMDISWCFQP---EKGLPKPDAVLLFKLNEE-ALQRRKGFGD--ERYEQTD----F 175
A MDI W Q + +PD + + E ++QR D E +E D
Sbjct: 110 GAH--MDIDWVIQANAMSASILRPDVNIFIDVAPEISMQRLHANRDTIELFETLDNLKLV 167
Query: 176 QRKVAENYEKLKDNIWI-DIDADKDIDTLGLIVKDI 210
+ K E +EKLK + +I +D ++ T LI DI
Sbjct: 168 RSKYMEAFEKLKGDEYIYSVDGNR---TPELIAGDI 200
>gi|410697638|gb|AFV76706.1| thymidylate kinase [Thermus oshimai JL-2]
Length = 202
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 93/216 (43%), Gaps = 33/216 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG F+ FEG D SGKTTQA+ L +L + + P I + L K + L
Sbjct: 2 RGRFLTFEGLDGSGKTTQAELLARWLRERGLRVLLTREPGGGIPE---VRGLLLKGV-LS 57
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC--TNDRYSFSGVAF 124
+A +LLFSA+R E H L++G +DRY S +A+
Sbjct: 58 PEAEYLLFSADRAE------------------HVRRVIRPALEEGAFVLSDRYLDSSLAY 99
Query: 125 SAAKEGMDISWCFQPEKGLP---KPDAVLLFKLNEEALQRRKGFGDERYEQTD--FQRKV 179
G+ + W Q +G +P +L L E RRKG D E D F +V
Sbjct: 100 QGFGLGLPLPWLLQVAEGATGGLRPHLTVLLDLPPEEALRRKGVRDG-IEGRDLSFFARV 158
Query: 180 AENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVI 212
E Y +L + ++ +DA KD + + ++ ++
Sbjct: 159 REGYLELARREPERFLVLDARKDKEEVQAAIRSAIM 194
>gi|409100229|ref|ZP_11220253.1| thymidylate kinase [Pedobacter agri PB92]
Length = 207
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 77/188 (40%), Gaps = 30/188 (15%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ + FI FEG D SGK+TQ K L + L+K+ + F G +I ++IE
Sbjct: 1 MKKNLFIAFEGIDGSGKSTQVKLLKEKLSKDG-HKIYSTFEPTDSPIGSLIRNIFNRRIE 59
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRYSFSGV 122
++A LF A+R + T GI K + +G T DRY FS
Sbjct: 60 TDERAIASLFVADRLDHLLNKT----NGIV-----------KKMQEGYTVITDRYYFSSY 104
Query: 123 AFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKV 179
A+ +A +D W + + KPD + ++ E ER ++
Sbjct: 105 AYHSATISLD--WLIEANSLSANILKPDLNIYIDIDPE-------ISIERLNSERSNIEI 155
Query: 180 AENYEKLK 187
EN E LK
Sbjct: 156 YENIENLK 163
>gi|20806623|ref|NP_621794.1| thymidylate kinase [Thermoanaerobacter tengcongensis MB4]
gi|23821773|sp|Q8RDE6.1|KTHY_THETN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|20515069|gb|AAM23398.1| Thymidylate kinase [Thermoanaerobacter tengcongensis MB4]
Length = 208
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL--RKKIE 64
RG FI FEG D GKTTQ K L ++L K + P T G + E L R+ +
Sbjct: 2 RGKFISFEGIDGCGKTTQVKLLEEHLKKEGYDLLVLREPGGT-RVGEKVREILLDRENLI 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
P LL++++R +L+E+ +I+ + + + + + Y + G A
Sbjct: 61 FP-VTEMLLYASSR-------AQLVEE----KILPALSKGQMVIVDRFIDSSYVYQGYAR 108
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTD--FQRKVAE 181
E + I KGL PD + + EEA++RR+G +R E D F +KV E
Sbjct: 109 GLGLEKVKIVNEIAT-KGLF-PDITVYIDITPEEAIKRRQGKKADRLEGEDYEFHKKVRE 166
Query: 182 NYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTI 215
Y +L + +I ID +++ L V +V+ +
Sbjct: 167 GYLRLVKDFPERFILIDGMQEV----LAVHKMVVKAV 199
>gi|149911598|ref|ZP_01900210.1| thymidylate kinase [Moritella sp. PE36]
gi|149805319|gb|EDM65332.1| thymidylate kinase [Moritella sp. PE36]
Length = 214
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 22/215 (10%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
F+V EG + +GK+T ++++L + I G + E +R ++ D
Sbjct: 5 FLVIEGLEGAGKSTAVSTVINWLAEQGITDVITTRE----PGGTKLAEKMRAIVKDVDTE 60
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
L SA +L+E I + Q DR+ S +A+
Sbjct: 61 EPLTESAELMLMYAARAQLVEHVIKPALAKG---------QWVVGDRHDLSSIAYQGGGR 111
Query: 130 GMDI---SWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGDE---RYEQTDFQRKVAEN 182
G DI + Q G KPD LL ++ LQR K G+ EQ F ++
Sbjct: 112 GFDIGVLNTLRQVAIGDFKPDMTLLLDIDPAVGLQRAKVRGELDRIELEQLSFFERIGAK 171
Query: 183 YEKL--KDNIWIDIDADKDIDTLGLIVKDIVIDTI 215
Y++L D+ +DA +DID + ++D++ + +
Sbjct: 172 YQELAAADDTIYSVDAGQDIDNVQAQIRDVLANHV 206
>gi|226356637|ref|YP_002786377.1| dTMP kinase [Deinococcus deserti VCD115]
gi|226318627|gb|ACO46623.1| putative dTMP kinase (thymidylate kinase) [Deinococcus deserti
VCD115]
Length = 218
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 30/206 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI FEG + +GK+TQ +LV L + ++P P T + + L + +
Sbjct: 12 FISFEGPEGAGKSTQIARLVARLEERSVPHTVTREPGGTPLGTRVREVLLDPDLSIDPLP 71
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRYSFSGVAFSAA 127
LL+SA+R + +T +I +T QG T DRY S +A+ A
Sbjct: 72 EFLLYSASRAQ---LVTHVIRPALT---------------QGHTVICDRYFDSSLAYQGA 113
Query: 128 KEGMDISW---CFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYEQTD--FQRKVA 180
G+ + + G PD +L L+ LQR G +R E+ D F ++V
Sbjct: 114 GRGLPVRLLRDLTREATGGLTPDLTVLLDLDPALGLQRVASRGQADRLERADLGFHQRVR 173
Query: 181 ENYEKL---KDNIWIDIDADKDIDTL 203
+ + L + ++ +DA + +D L
Sbjct: 174 QGFLDLAAAEPGRFLVLDATRSVDEL 199
>gi|419759845|ref|ZP_14286130.1| thymidylate kinase [Thermosipho africanus H17ap60334]
gi|407514884|gb|EKF49670.1| thymidylate kinase [Thermosipho africanus H17ap60334]
Length = 201
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 92/215 (42%), Gaps = 34/215 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI FEG D SGK+TQ L YL + P TI I D L + + ++
Sbjct: 2 FIAFEGIDGSGKSTQLNLLSQYLKSKGKKVLNIREPGGTILGEKIRDILLDNNLNINKRS 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSAA 127
LLF A+R +L+E+ I + +L++G DR+S S +A+
Sbjct: 62 ELLLFLASR-------AQLVEEVI-----------KPHLERGFFVLADRFSDSSIAYQGG 103
Query: 128 KEGMDISWC-----FQPEKGLPKPDAVLLFKL-NEEALQRRKGFGDERYEQTD--FQRKV 179
+ + F + PD V + + A++R K +R E+ F KV
Sbjct: 104 ARNIGVETVSTLNDFATDN--IYPDIVFYIDIPTKIAMERLKDKNLDRLEKEGQIFLEKV 161
Query: 180 AENY---EKLKDNIWIDIDADKDIDTLGLIVKDIV 211
Y KL+DN +I ID K ID++ +K IV
Sbjct: 162 RNTYLKLSKLRDNFFI-IDGTKSIDSVFAEIKSIV 195
>gi|449127376|ref|ZP_21763649.1| thymidylate kinase [Treponema denticola SP33]
gi|448944109|gb|EMB24990.1| thymidylate kinase [Treponema denticola SP33]
Length = 213
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 20/183 (10%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS--TGHIIDEYLRKKIELPD 67
F+VFEG D SG T+Q + L + + S V+F S G +I L+ +L
Sbjct: 10 FVVFEGIDGSGTTSQIRLLKERFESED-KSFLVSFTQEPTSGPIGTLIRSALQGSFKLAP 68
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ LF+A+R E L QGI N N + +DRY FS +A+ A
Sbjct: 69 ETMTRLFAADRCEHIYGL-----QGII---------NRLNEGRAVFSDRYVFSSLAYQTA 114
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGD--ERYEQTDFQRKVAENYEK 185
D++ Q E + ++ R G + E YE+ +FQ KV + Y+K
Sbjct: 115 AGAADLA-KLQNEGFPLPEFLFFFDLPVDISMNRVMGRSNVLEIYEEKNFQYKVQDEYKK 173
Query: 186 LKD 188
+ D
Sbjct: 174 IID 176
>gi|373495047|ref|ZP_09585638.1| thymidylate kinase [Eubacterium infirmum F0142]
gi|371966501|gb|EHO83989.1| thymidylate kinase [Eubacterium infirmum F0142]
Length = 227
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR-- 60
S+ RG FI EG D SGK+TQ + +YL I + F+ P T S G I + L
Sbjct: 16 SEFNRGIFISVEGGDGSGKSTQLANIREYLEGRGIDALFIREPGGT-SIGEKIRDILLDP 74
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
E+ LL++A+R + I E++ +L + K + DR+ S
Sbjct: 75 ANSEMCAMTEALLYAASRAQ------------IVSEVIKPALASGKLV----ICDRFVDS 118
Query: 121 GVAFSAAKEGM-DISWCFQPEK-GLPKPDAVLLFKLNEE-ALQR--RKGFGDERYE--QT 173
+A+ A M D+ W PD +N AL R +G +R E +
Sbjct: 119 SIAYQAYGRQMGDVIWDINKYAVDFAMPDYTFFLDINPHIALDRIDSRGENKDRMELQED 178
Query: 174 DFQRKVAENYEKL------KDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
F+ +V Y L +D I I IDA K I+T VK +ID +++
Sbjct: 179 SFRMRVHNGYLALMEDEANRDRI-IRIDASKGIET----VKTDIIDKLEE 223
>gi|384133943|ref|YP_005516657.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339288028|gb|AEJ42138.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 213
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 32/226 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR--KKIE 64
+G I FEG D +GKTTQ +L +L +P P T G + L + E
Sbjct: 3 KGLLITFEGIDGAGKTTQLLRLASWLEAQGLPVVVTREPGGT-RIGDAVRAILLDPRHQE 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ + LL++A+R + +E+ I + + DR+ + +A+
Sbjct: 62 MAPRTEALLYAASR-------AQHVEELIRPALARGEI---------VLCDRFVDASIAY 105
Query: 125 SAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQ-----RRKGFGDERYEQTD-- 174
A G+ +W + G +PD L F L+ + R +G G +R E+ D
Sbjct: 106 QGAGLGLGEAWVEALNEYALGGLRPDLTLWFHLDWATARLRLRARAEGAGLDRIERRDEA 165
Query: 175 FQRKVAENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
F +VA+ +E+L + IDA + D + ++ +V + I++
Sbjct: 166 FFERVADAFERLWRAAPEMRKRIDASRSPDDIEQEIRALVWNLIQQ 211
>gi|126458752|ref|YP_001055030.1| thymidylate kinase [Pyrobaculum calidifontis JCM 11548]
gi|171855086|sp|A3MSE7.1|KTHY_PYRCJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|126248473|gb|ABO07564.1| thymidylate kinase [Pyrobaculum calidifontis JCM 11548]
Length = 193
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 34/208 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEY-LRKKIELPDQ 68
FI EG D SGKTT ++ L + + + P G ++ E+ LR P
Sbjct: 2 FIAVEGIDGSGKTTVIAEVAKALPRVYVTREPSGGP-----IGRLLKEWALRGGTADPHV 56
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSA 126
A LLF+A+R E H E E L +G +RY S +A+
Sbjct: 57 DA-LLFAADRVE------------------HYKREIEPKLREGYIVITERYVESSIAYQG 97
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGD-ERYEQTDFQRKVAENY- 183
A G+ I + +P+P ++ ++ EA++R K E++E +F R+V E Y
Sbjct: 98 AA-GVPIEYILYINSVVPRPHLTIILDVDPAEAIKRIKARERLEKFEDVEFLRRVREIYL 156
Query: 184 EKLKDNIWIDIDADKDIDTLGLIVKDIV 211
+ + + IDA + G + KD+V
Sbjct: 157 TRARAEGYPVIDAGR---PAGEVAKDVV 181
>gi|320526760|ref|ZP_08027950.1| thymidylate kinase [Solobacterium moorei F0204]
gi|320132728|gb|EFW25268.1| thymidylate kinase [Solobacterium moorei F0204]
Length = 211
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 48/218 (22%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR------K 61
G FI FEG D SGKTT + + + L + ++ P G I E +R K
Sbjct: 4 GLFITFEGPDGSGKTTVSTAVTNMLEADGYQVRYTREPG-----GSNIAEQIRHVILDPK 58
Query: 62 KIELPDQAAHLLFSANRWEREPTLTK---LIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
E+ + LL++A+R R+ + K ++EQG+ + +DR+
Sbjct: 59 NTEMDARTEALLYAASR--RQHLIDKVLPVLEQGVHV-----------------ISDRFV 99
Query: 119 FSGVAFSAAKE--GMDISW---CFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQT 173
S +A+ GMD + F E + PD + +++ E +R G E ++
Sbjct: 100 DSSLAYQGCGREIGMDEVYEINQFAIENHM--PDKTIFLQIDAETGLKRIHKGREVLDRL 157
Query: 174 D-----FQRKVAENYEKLKDNI---WIDIDADKDIDTL 203
D F ++V E Y+K+ + I +DA D+DT+
Sbjct: 158 DQESVEFHQRVHEGYQKVIEKYADRMIIVDATADVDTV 195
>gi|329122084|ref|ZP_08250692.1| thymidylate kinase [Dialister micraerophilus DSM 19965]
gi|327466891|gb|EGF12407.1| thymidylate kinase [Dialister micraerophilus DSM 19965]
Length = 224
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 39/201 (19%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI---- 63
G IV EG D SGK TQ++ L + L KNN V FPD + ++ YL
Sbjct: 3 GKLIVLEGIDGSGKATQSELLAEALKKNNKSVIQVTFPDYESQSSSLVKMYLNGNFGTAP 62
Query: 64 -ELPDQAAHLLFSANRW-EREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
++ AA + ++ +R+ + K EQG + DRY+ S
Sbjct: 63 EDVNPYAASMFYAVDRFASYKMKWKKFYEQGGIV-----------------IADRYTTSN 105
Query: 122 VAFSAAKEGMD------ISWCFQPEK---GLPKPDAVLL----FKLNEEALQRRK---GF 165
+ K + + W + E GLP PD V+L +++E+ ++ R G
Sbjct: 106 MVHQMTKYDNEDEREKFLKWLEETEYKILGLPTPDMVILLDVPLEISEKLVKERALSGGN 165
Query: 166 GDERYEQTDFQRKVAENYEKL 186
D + D+ K ++Y+ L
Sbjct: 166 MDIHEKHLDYLHKCYDSYQWL 186
>gi|254479299|ref|ZP_05092640.1| thymidylate kinase [Carboxydibrachium pacificum DSM 12653]
gi|214034774|gb|EEB75507.1| thymidylate kinase [Carboxydibrachium pacificum DSM 12653]
Length = 208
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL--RKKIE 64
RG FI FEG D GKTTQ K L ++L K + P T G + E L R+ +
Sbjct: 2 RGKFISFEGIDGCGKTTQVKLLEEHLKKEGYDLLVLREPGGT-RVGEKVREILLDRENLI 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
P LL++++R +L+E+ +I+ + + + + + Y + G A
Sbjct: 61 FP-VTEMLLYASSR-------AQLVEE----KILPALSKGQMVIVDRFVDSSYVYQGYAR 108
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTD--FQRKVAE 181
E + I KGL PD + + EEA++RR+G +R E D F +KV E
Sbjct: 109 GLGLEKVKIVNEIAT-KGLF-PDITVYIDITPEEAIKRRQGKKADRLEGEDYEFHKKVRE 166
Query: 182 NYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTI 215
Y +L + ++ ID +++ L V +V+ +
Sbjct: 167 GYLRLVKDFPERFVLIDGMQEV----LAVHKMVVKAV 199
>gi|269986146|gb|EEZ92459.1| dTMP kinase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 200
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 85/211 (40%), Gaps = 26/211 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FIV EG D +GK TQ+ L +++ P I G I L K++ L
Sbjct: 2 KGKFIVIEGIDNAGKGTQSVLLAEHIRSKGFKVILTKEPTNGI-LGGISKAALNKELNLS 60
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAF 124
++A LLF A+R H E E + G DRY FS +A+
Sbjct: 61 NKALQLLFCADRAH------------------HLETEIEPAMRDGFIVICDRYFFSTLAY 102
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGF--GDERYEQTDFQRKVAE 181
A ++ W KPD + L+ + +L R K G + ++ + KV +
Sbjct: 103 GFA-SNINYKWLRSVNVSFRKPDLGIYLDLDPKTSLSRAKKQVDGLQLFDNLEKISKVRQ 161
Query: 182 NYEKLKDNIWI-DIDADKDIDTLGLIVKDIV 211
Y + I IDA D++ + + I+
Sbjct: 162 AYLSIAKEFHIKKIDAKGDVEVVSQRINKII 192
>gi|257440771|ref|ZP_05616526.1| dTMP kinase [Faecalibacterium prausnitzii A2-165]
gi|257196745|gb|EEU95029.1| dTMP kinase [Faecalibacterium prausnitzii A2-165]
Length = 222
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 31/171 (18%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ +G IV EG D SGK TQAK L +L + + + FPD + ++ YL +
Sbjct: 1 MSKGKLIVLEGLDGSGKGTQAKLLAKHLTVTDHLVREITFPDYDSDSSALVKMYLAGQFG 60
Query: 64 ELPDQ----AAHLLFSANRWE-REPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
+ PD AA ++ +R+ + K E+G L DRY+
Sbjct: 61 DKPDDVNAYAASSFYAVDRYAGYKSDWGKFYEEGGIL-----------------IADRYT 103
Query: 119 FSGVAFSAAK---EGMD--ISWCFQPEK---GLPKPDAVLLFKLNEEALQR 161
S +K E D + W F E GLP PD V+ +++ QR
Sbjct: 104 TSNAVHQCSKLPPEQWDTFLQWLFDYEYHLLGLPAPDKVIYLQVDPAVSQR 154
>gi|424863208|ref|ZP_18287121.1| dTMP kinase [SAR86 cluster bacterium SAR86A]
gi|400757829|gb|EJP72040.1| dTMP kinase [SAR86 cluster bacterium SAR86A]
Length = 196
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 11 IVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQAA 70
I FEG + GK+TQ L YL K + + P T S HI + L K+ ++ +
Sbjct: 4 ISFEGIEGVGKSTQINLLQSYLEKQDFTVDVLREPGSTTSAEHIREILLNKENDISKETE 63
Query: 71 HLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKEG 130
LL A R + LI + I N DRY + +A+ G
Sbjct: 64 LLLMFAAR-------SDLINKRI-----------HNNDSDFVLLDRYYDASIAYQGYGRG 105
Query: 131 MDISWCFQPEKGL--PKPDAVLLFKLN-EEALQRRKGFGDERYEQT--DFQRKVAENYEK 185
+ + + K + PKPD LF L+ E++ R+K +R E + F +V Y +
Sbjct: 106 IPLDFIENLIKLIQCPKPDVSFLFDLSVEDSFSRKKLDVKDRIESSGNSFFERVKNGYLE 165
Query: 186 LKDN---IWIDIDADKDIDTLGLIVKDIV 211
+ N + IDA K+I+ + I+K ++
Sbjct: 166 IAKNQNERFHIIDATKEINEIHNIIKKVL 194
>gi|325971230|ref|YP_004247421.1| thymidylate kinase [Sphaerochaeta globus str. Buddy]
gi|324026468|gb|ADY13227.1| Thymidylate kinase [Sphaerochaeta globus str. Buddy]
Length = 203
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 26/183 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFP-DRTISTGHIIDEYLRKKIELPDQ 68
FIVFEG D +G TTQ + L + ++ + P + P D+ I G ++ L+K+I
Sbjct: 8 FIVFEGLDGAGTTTQMQLLAEACDRADTPCRATFEPTDKPI--GRLVRSVLQKQILTTPL 65
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSA 126
A +L++A+R + I+H +L+ G +DRY +S +++
Sbjct: 66 ALAMLYAADREDH--------LNNPVYGIIH-------DLEAGKLVISDRYLYSSLSYQG 110
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGD--ERYEQTDFQRKVAENY 183
+ + P P V +E L+R G+ E +E+ +F KV ENY
Sbjct: 111 VECDFEKIASL---NEFPSPQYVFFIDTPVDECLRRINSRGNEVELFEKKEFLHKVKENY 167
Query: 184 EKL 186
E++
Sbjct: 168 ERI 170
>gi|188996346|ref|YP_001930597.1| dTMP kinase [Sulfurihydrogenibium sp. YO3AOP1]
gi|229621845|sp|B2V7X0.1|KTHY_SULSY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|188931413|gb|ACD66043.1| dTMP kinase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 204
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 96/225 (42%), Gaps = 41/225 (18%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYL---NKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
G FI FEG + SGKTTQ L DYL KN I ++ P T G I E L K +
Sbjct: 2 GFFITFEGIEASGKTTQINLLYDYLKSIGKNVIKTR---EPGGT-KIGQKIREILLSKWD 57
Query: 65 --LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFS 120
P A LL+ ++R ++ K +LD G +DRY S
Sbjct: 58 EKFPYIAELLLYESDRNIHIQSIVK------------------PSLDAGYIVLSDRYIDS 99
Query: 121 GVAFSAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTD--F 175
A+ G+D +S+ KP+ L + E +R +R E D F
Sbjct: 100 TTAYQHYARGIDYEIVSYLNTLATDGLKPNLTFLIDIPVEISLKRLSESKDRIESEDIEF 159
Query: 176 QRKVAENYEKLKDN---IWIDIDADKDIDTLGLIVKDIVIDTIKK 217
+K+ E + K+ +N ++ ID DI + + I++D++K+
Sbjct: 160 HKKLREGFLKIAENEKGRFVVIDGTMDI----MEIHKIIVDSLKQ 200
>gi|406959096|gb|EKD86539.1| hypothetical protein ACD_37C00249G0003 [uncultured bacterium]
Length = 223
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 40/212 (18%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G F+V EG + SGKTTQ KL++ + N D I T I +E L + ++P
Sbjct: 20 GKFVVLEGIEASGKTTQVAKLLEAFPDAVLAK---NPTDGEIGT-FIRNEVLGGRTDIPP 75
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
A LFSA+R + L +L+++G T+ DRY +S VA+ A
Sbjct: 76 VAYQYLFSADREIFQQELIELLKEGKTV-----------------ICDRYFWSSVAYGAI 118
Query: 128 -KEGMDIS----------WCFQPEKGLPKPDAVLLFKLN-EEALQRRKGF--GDERYEQT 173
KE +DI PD + ++ EE+L+R K E Y+
Sbjct: 119 DKEDLDIEDFEQVSLVSLSILSMYHQFLVPDLTVYLDVSLEESLRRLKDSVKHTEIYDNH 178
Query: 174 DFQRKVAENYE----KLKDNIWIDIDADKDID 201
+ KV + YE K D I + IDA+ I+
Sbjct: 179 ETNVKVKKGYEWLIKKFPDEITV-IDANGSIE 209
>gi|302336221|ref|YP_003801428.1| thymidylate kinase [Olsenella uli DSM 7084]
gi|301320061|gb|ADK68548.1| thymidylate kinase [Olsenella uli DSM 7084]
Length = 231
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 94/226 (41%), Gaps = 44/226 (19%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
RG + EG D GK+TQA L D+L + + P G + E +R+ +
Sbjct: 28 RGRLVTLEGIDGCGKSTQAALLADHLEASGHEVVCLREPG-----GTAVSEKIRQLLLDP 82
Query: 64 ---ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC--TNDRYS 118
E+ D+ LL+ A+R +L+ Q I E L++G DRY
Sbjct: 83 VNDEMADECELLLYEASR-------AQLVRQVI-----------EPALERGAVVVCDRYF 124
Query: 119 FSGVAFSAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGDERYEQTD 174
S A+ G+D + C + +PD L+F L+ A R G +R E
Sbjct: 125 DSTYAYQHGGRGLDRTLVERCNELGSCGRRPDVTLVFDLDPTVAFARATQGGRDRLEGAG 184
Query: 175 --FQRKVAENYEKL--KDNIWID-IDADKDIDTLG----LIVKDIV 211
FQ +V +Y L K+ + IDA D +G L++ D++
Sbjct: 185 LRFQERVRASYLDLAAKEPARVRVIDATGSADEVGRRALLVLADVL 230
>gi|269114872|ref|YP_003302635.1| thymidylate kinase (dTMP kinase) [Mycoplasma hominis ATCC 23114]
gi|268322497|emb|CAX37232.1| Thymidylate kinase (dTMP kinase) [Mycoplasma hominis ATCC 23114]
Length = 213
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 102/238 (42%), Gaps = 42/238 (17%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ +G F+VFEG D SGKTT KKL +YL N FV F S+ E +R+ I
Sbjct: 1 MSKGKFVVFEGMDGSGKTTIIKKLKEYLESKNRLDDFV-FTREPGSSHSKEAEEIRQLIL 59
Query: 65 LPDQAAH-----LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
D + LLF+A+ R L K + G+ +KN + +DRY
Sbjct: 60 DNDNSFSVMVDALLFAAS---RRLNLEKCVWPGL-----------KKN--KTVISDRYWT 103
Query: 120 SGVAFSAAKEGM------DISWCFQPEKGLPKPDAVLLF----KLNEEALQRRKGFGDER 169
S + G+ DI+ E PD + F +L+ E + + + +R
Sbjct: 104 SSFVYQGVLGGLGLKKVKDINNIATEE---TTPDLTIFFDMEPELSVERITQIRKTKTDR 160
Query: 170 YEQTDFQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLESNK 227
E T+ E Y+KL+D+ W I+ + +I D ID + K + L+ NK
Sbjct: 161 LESTN-----VEYYKKLRDSYWYVINQGN--EKYEIIKSDCNIDELFKRVLNVLKENK 211
>gi|376259537|ref|YP_005146257.1| thymidylate kinase [Clostridium sp. BNL1100]
gi|373943531|gb|AEY64452.1| thymidylate kinase [Clostridium sp. BNL1100]
Length = 206
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 39/214 (18%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR------ 60
+G FI EG D SGKTTQ K + ++L I P G I E +R
Sbjct: 3 KGLFITVEGTDGSGKTTQIKLMEEFLKAAGINVVLSREPG-----GTEISEMIRNLILDP 57
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ I++ +L++A R + +++ +LE+ K + DR+ S
Sbjct: 58 RNIDISPLTELMLYAAARAQH------------VFQVIRPALESGKYV----ICDRFVDS 101
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPK---PDAVLLFKLNEE-ALQRR-KGFGDERYEQ--T 173
A+ G+D+ + PD ++ A++RR K G +R EQ
Sbjct: 102 SYAYQGCGRGVDLKTVADVNRAAVDGVVPDITFFLDIDPRLAIERRIKSTGADRIEQEKM 161
Query: 174 DFQRKVAENYEKLK----DNIWIDIDADKDIDTL 203
DF +V E Y K+ D I IDA K I+ +
Sbjct: 162 DFHIRVYEGYRKMSLLYPDRIK-TIDASKSIEEI 194
>gi|406931408|gb|EKD66698.1| Thymidylate kinase [uncultured bacterium (gcode 4)]
Length = 232
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 33/171 (19%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+ FIV E D SGK TQ K LV+ L K+ + ++FP + ++ +L P
Sbjct: 2 KNKFIVIEWVDGSGKATQTKLLVENLKKDWFSADSISFPAYWEWSCRFVENFLNWAYGHP 61
Query: 67 DQAAHLLFSA----NRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+ ++S+ +R+E+ P + + I+ L +DRYS +
Sbjct: 62 SEVNWYIWSSFYVLDRFEQSPKIKQKIQDNDFL-----------------ISDRYSTANF 104
Query: 123 A--FSAAKEGMDISWC---------FQPEK-GLPKPDAVLLFKLNEEALQR 161
++ E DI W F+ K GLP+PD ++ L+ E +++
Sbjct: 105 VHRWTQFLEKWDIHWLHHFFDWVYDFEFNKAGLPQPDLIIFLSLSMENIKK 155
>gi|399923974|ref|ZP_10781332.1| thymidylate kinase [Peptoniphilus rhinitidis 1-13]
Length = 202
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 29/204 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
AFI FEG D SGK+T A + + + K N P T + I + L K +E D
Sbjct: 2 SAFITFEGPDGSGKSTIANLVYEEILKKNKKVLKTREPGGTRISEKIRELILDKDLEEMD 61
Query: 68 QAAH-LLFSANRWER--EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ LL+SA R + E + L + I L C +RY S +A+
Sbjct: 62 KRTEALLYSAARAQHTYEKIVPALRDSYIVL----------------C--ERYVLSSLAY 103
Query: 125 SAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRKGFGDERYEQT--DFQRKV 179
G D+ G KPD V +F+ +++ L R+ +R E+ +F +KV
Sbjct: 104 QGFARGQDLEDIMAINNFATGNIKPDIVFIFRTDKKTLLRKDKNSYDRLERESDEFHKKV 163
Query: 180 AENYEKL--KDNIWIDIDADKDID 201
E Y L +DN + ID K I+
Sbjct: 164 REYYNNLEKEDNFYF-IDVSKSIE 186
>gi|403717588|ref|ZP_10942767.1| thymidylate kinase [Kineosphaera limosa NBRC 100340]
gi|403209064|dbj|GAB97450.1| thymidylate kinase [Kineosphaera limosa NBRC 100340]
Length = 235
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
PRG F+VFEG D +GK+TQ L +L + + P T + + L +
Sbjct: 11 PRGVFVVFEGGDGAGKSTQVALLSQWLGERGVEHVLTREPGGTALGTRLRELLLHVEDGG 70
Query: 66 P-DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGV 122
P +A LLF+A+R + TL + L G +DRY S +
Sbjct: 71 PVPRAEALLFAADRAQHAATLVR------------------PALAAGRWVVSDRYIDSSI 112
Query: 123 AFSAAKEGMDI-------SWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDE---RYEQ 172
A+ +D +W ++ +P +L + A +RR E E
Sbjct: 113 AYQGGGRDLDTDEVARLSAWAT--DELVPDLTVLLDVPVAVGAQRRRSAAAPEDRMESES 170
Query: 173 TDFQRKVAENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKKS 218
F +VA+ + +L + ++ +DA + L V+D ID ++ +
Sbjct: 171 VRFHEQVAQRFRQLAEAAPQRYLVLDATAEPAALSAAVRD-RIDALRGA 218
>gi|407472638|ref|YP_006787038.1| thymidylate kinase Tmk [Clostridium acidurici 9a]
gi|407049146|gb|AFS77191.1| thymidylate kinase Tmk [Clostridium acidurici 9a]
Length = 214
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 36/202 (17%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-IS--TGHIIDE 57
M + +G FI EG D SGK+T ++ L YL + + P T IS HII +
Sbjct: 1 MRGEQMKGLFITLEGPDGSGKSTVSRMLASYLRERGLRVTLTREPGGTDISEKIRHIILD 60
Query: 58 YLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTND 115
K E+ LL++A+R + H S + +D G D
Sbjct: 61 --NKNTEIAYTTEALLYAASRAQ------------------HISEKIVPAIDDGRIIICD 100
Query: 116 RYSFSGVAFSAAKEGMDISWCFQPE----KGLPKPDAVLLFKLNEE-ALQR--RKGFGDE 168
R+ S + + G+ I +G+ +PDA+L F +N + AL+R RK GD
Sbjct: 101 RFVLSSLVYQGIGRGLGIDSVKMINDFAIQGI-EPDAILFFDINPKIALKRKTRKSKGD- 158
Query: 169 RYEQTD--FQRKVAENYEKLKD 188
R E+ D F KV + Y+ L +
Sbjct: 159 RLEKEDISFHEKVYKGYKHLTE 180
>gi|257457560|ref|ZP_05622727.1| thymidylate kinase [Treponema vincentii ATCC 35580]
gi|257444946|gb|EEV20022.1| thymidylate kinase [Treponema vincentii ATCC 35580]
Length = 209
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 80/204 (39%), Gaps = 28/204 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIP-SQFVNFPDRTISTGHIIDEYLRKKIELPDQ 68
F+VFEG D +G T+Q + L + + + + S G +I E L +
Sbjct: 6 FVVFEGLDGTGTTSQLRLLREAFTTRGLQDTVYFTCEPTGDSIGKLIREALSGAAGFDAK 65
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
LF A+R E S + + + +DRY FS +A+
Sbjct: 66 TIAYLFGADRCEH--------------VYGKSGILTQLQAGKAVFSDRYLFSSLAYQGLD 111
Query: 129 EGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQR--RKGFGDERYEQTDFQRKVAENYEK 185
G +++ P P+ + F L A+ R ++ E YE+ FQ+KVA Y+
Sbjct: 112 AGKELAQTINAP--FPLPEYLFFFDLPASTAMARIEKRNIPREIYEKETFQQKVAAEYQA 169
Query: 186 L--------KDNIWIDIDADKDID 201
+ D + IDA K I+
Sbjct: 170 IFRHYAETAPDMRILRIDASKTIE 193
>gi|268611868|ref|ZP_06145595.1| putative thymidylate kinase [Ruminococcus flavefaciens FD-1]
Length = 224
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
+G IV EG D SGK TQ L + L + +FPD + ++ YL K
Sbjct: 2 KGKLIVIEGLDGSGKATQTALLCEKLKTLGVEFDHFSFPDYNSESSLLVRMYLDGKFGDN 61
Query: 64 --ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
E+ AA F+ +R+ T + +G + + DRY+ S
Sbjct: 62 AAEVNPYAASCFFACDRYASFRTQWQDKYEGGHIIVC----------------DRYTTSN 105
Query: 122 VAFSAAK----EGMD-ISWCFQPEK---GLPKPDAVLLFKLNEE---ALQRRKGFGDER 169
+K E D ++W F E GLP+PDAV+ +++ E L +++ GDE+
Sbjct: 106 AVHQCSKLPDGEWDDFVNWLFDFEYRKIGLPEPDAVIYLRVDPEIGQELLKKRYNGDEK 164
>gi|304315605|ref|YP_003850750.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|433653807|ref|YP_007297515.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|302777107|gb|ADL67666.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|433291996|gb|AGB17818.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 205
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 88/210 (41%), Gaps = 32/210 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNF--PDRTISTGHIIDEYLRKKIE 64
+G I FEG D SGKTTQ L +YL NI V P T I + L KK +
Sbjct: 3 KGKLITFEGIDGSGKTTQINLLKEYL--LNIGRDIVVLREPGGTSVGEKIRNILLDKKNK 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ A LL++A+R E + E++ SL N K DR+ S + +
Sbjct: 61 IVPTAEALLYAASRAE------------LVKEVIIPSLNNGKI----VILDRFVDSSIVY 104
Query: 125 SAAKEGMDISWCFQPEK----GLPKPDAVLLFKLNE----EALQRRKGFGDERYEQTDFQ 176
G+ + + GL PD + + + + RRK E +F
Sbjct: 105 QGYARGIGVKAVEEINNIAIAGLV-PDLTIYLDIKPKDTIKRIDRRKDKDRLEMEDLEFH 163
Query: 177 RKVAENYEKL---KDNIWIDIDADKDIDTL 203
KV E Y++L + + ++ IDA DID +
Sbjct: 164 EKVYEGYKQLIKSRPDRYLVIDATHDIDYI 193
>gi|406959095|gb|EKD86538.1| dTMP kinase [uncultured bacterium]
Length = 234
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 31/192 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYL---NKNNIPSQFVNF-PDRTISTGHIIDEYLRKKI 63
G +I FEG D +GK+ Q L +YL KN + V F P R G +I++ L+KK+
Sbjct: 24 GLYIAFEGIDGAGKSVQVTHLDEYLKSVGKNTV----VTFQPRRDGPVGALINDILQKKV 79
Query: 64 ELPDQAAHLLFSANR----WER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDR-- 116
++P + L++A+R ER EP L E G + + H + + NL G ++
Sbjct: 80 KVPSVSLQYLYTADRIIDHIERIEPAL----ESG-RIVLSHRCMWS--NLPYGLFDEHIV 132
Query: 117 -YSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQR--RKGFGDERYEQ 172
Y + G+ +S Q PD ++ EE ++R RK G E YE+
Sbjct: 133 DYDSNIARVIDVAHGL-LSLYHQ----FIVPDITFYLRVTAEEVIRRLERKHEGLELYEK 187
Query: 173 TDFQRKVAENYE 184
KVA+ YE
Sbjct: 188 KSKMEKVAKGYE 199
>gi|406951984|gb|EKD81748.1| hypothetical protein ACD_39C01659G0005 [uncultured bacterium]
Length = 215
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 83/208 (39%), Gaps = 33/208 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI-EL 65
+G+FI FEG + SGKTTQ L D+L P T + I L +I L
Sbjct: 3 KGSFITFEGPEGSGKTTQIALLRDFLTNRGFEVITTREPGGTSAGDRIRSVLLGNEIGSL 62
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
+ L A R E L K+I+ + N + DRY S +A+
Sbjct: 63 EPETELFLMLAQRTEH---LRKVIQPAV-------------NQGKMVLCDRYFDSSMAYQ 106
Query: 126 AAKEGMD------ISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERY-----EQTD 174
G+D I F P G VLL E+ L+R + G +++ E D
Sbjct: 107 GYARGLDPQKIREIHAQFLP--GFLPECTVLLQIAPEQGLERARHGGRKQHDRIESEDLD 164
Query: 175 FQRKVAENYEKL---KDNIWIDIDADKD 199
F R+V E Y L + ++ + AD D
Sbjct: 165 FHRRVYEGYNSLARQEPERFVLVQADGD 192
>gi|225849733|ref|YP_002729967.1| thymidylate kinase [Persephonella marina EX-H1]
gi|225646361|gb|ACO04547.1| thymidylate kinase [Persephonella marina EX-H1]
Length = 216
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL---RKKI 63
RG FI FEG + +GK+TQ+K L +YL KN + P T G I E L K+I
Sbjct: 11 RGFFITFEGIEGAGKSTQSKMLYEYLIKNGKNAVLTREPGGT-DLGKKIREILLNPSKEI 69
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
P A +L+ A+R +H+ ++ N +DR++ S +A
Sbjct: 70 -FPPVAELMLYEADRNIH----------------VHNIIKPYLNRGFYVISDRFTDSTLA 112
Query: 124 FSAAKEGMDISWCFQ----PEKGLPKPDAVLLFKLN-EEALQRRKGFGD-ERYEQ--TDF 175
+ G+DI + +G+ KPD + + EE ++R + + +R EQ DF
Sbjct: 113 YQGYARGIDIELVERLNDIASEGI-KPDITFIIDIPVEEGMKRIHRYREKDRIEQEGVDF 171
Query: 176 QRKVAENYEKLKDN-----IWIDIDADKDI 200
+++ E + ++ + +D DK+I
Sbjct: 172 HKRLREGFLRIAQKERERVVLLDGRKDKEI 201
>gi|78778518|ref|YP_396630.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9312]
gi|123554778|sp|Q31D51.1|KTHY_PROM9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|78712017|gb|ABB49194.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9312]
Length = 212
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 30/221 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR------ 60
+G FIV EG D GKTTQ +L +L K+ + + G ++ + LR
Sbjct: 2 KGKFIVIEGIDGCGKTTQINELSKWLPKSGLIKKGSKLITTREPGGSLLGKKLRGLILDN 61
Query: 61 KKIELPDQAAH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
K P A LL+SA+R E ++K+I + N + +DR+S
Sbjct: 62 NKTNKPSSLAELLLYSADRAEH---ISKIISPAL-------------NNNDWVISDRFSD 105
Query: 120 SGVAFSAAKEGMDISWCFQPEKGLPK---PDAVLLFKLN-EEALQRRKGFGDERYEQ--T 173
S +A+ +++ + E + + PD +++ EE++ RRK +R E
Sbjct: 106 STLAYQGYGRKINLEIIKKVESIVCQGEYPDLTFFLEISPEESIMRRKNEIPDRIESEGI 165
Query: 174 DFQRKVAENYEKL-KDNIWIDIDADKDIDTLGLIVKDIVID 213
F KV E ++ + ++ W I A ++I T+ +K+ +++
Sbjct: 166 RFLEKVNEGFKLIAREKKWKVISASQNIKTISNQIKETLLN 206
>gi|256826256|ref|YP_003150216.1| thymidylate kinase [Kytococcus sedentarius DSM 20547]
gi|256689649|gb|ACV07451.1| thymidylate kinase [Kytococcus sedentarius DSM 20547]
Length = 213
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 33/217 (15%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFV--NFPDRTISTGHIIDEYLRKKIEL 65
G F+ EG D +GK+TQ + LV++L + + V P T G I E L +
Sbjct: 7 GLFVALEGGDGAGKSTQIRLLVEHLAGQHAGREVVVTREPGGT-DLGRRIRELLLHGDHV 65
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC--TNDRYSFSGVA 123
+A LLF+A+R +L + LD+G DRY S +A
Sbjct: 66 APRAEALLFAADRAHHVESLVR------------------PALDRGAVVVGDRYVDSSIA 107
Query: 124 FSAAKEGMD----ISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ--TDFQR 177
+ A +D S +GL PD +L ++ + R+G +R E T F
Sbjct: 108 YQGAGRDLDAVEVASISRWATEGL-VPDLTVLLDVDPATGRSRRGAEHDRLEAEPTAFHE 166
Query: 178 KVAENYEKLKDNI---WIDIDADKDIDTLGLIVKDIV 211
+V +++ L ++ +DA + LG V V
Sbjct: 167 RVRQHFLDLAAAAPQRYLVLDASRPPQELGAEVARAV 203
>gi|116623132|ref|YP_825288.1| thymidylate kinase [Candidatus Solibacter usitatus Ellin6076]
gi|116226294|gb|ABJ85003.1| thymidylate kinase / thymidylate synthase [Candidatus Solibacter
usitatus Ellin6076]
Length = 259
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 44/237 (18%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
A + RG I FEG D SGKTTQ K L KN + S+ ++ +I ++
Sbjct: 23 AREARRGLLIAFEGPDGSGKTTQRK-----LFKNWLKSEGHEVVTTKWNSSALIKPLVKA 77
Query: 62 K---IELPDQAAHLLFSAN-RWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
+ L + LL +A+ R+ E + + QG Q DRY
Sbjct: 78 RKAARSLSPEEFSLLHAADFRYRLETEILPALWQG-----------------QVVVADRY 120
Query: 118 SFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE------ALQRRKGF---GDE 168
F+ +A AA+ GMD+ W + + L PD V F ++ E A +R F G +
Sbjct: 121 LFTALARDAAR-GMDLHWLLEVYRPLFWPDLVFYFSVSPETSGKRIAAERAPNFYEAGQD 179
Query: 169 RYEQTD-------FQRKVAENYEKLKDNI-WIDIDADKDIDTLGLIVKDIVIDTIKK 217
E D F +V + YE L ++ +DA++ I ++++ + +++
Sbjct: 180 VTEIADPFQSYAHFIGRVIQEYEALAKVFRFVTVDAEQSIFDQHRQIRELFAEGVRR 236
>gi|449105722|ref|ZP_21742422.1| thymidylate kinase [Treponema denticola ASLM]
gi|448966803|gb|EMB47449.1| thymidylate kinase [Treponema denticola ASLM]
Length = 213
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 22/184 (11%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS--TGHIIDEYLRKKIELPD 67
F+VFEG D SG T+Q + L + + S V+F S G +I L+ +L
Sbjct: 10 FVVFEGIDGSGTTSQIRLLKERFESED-KSSLVSFTQEPTSGPIGTLIRSALQGSFKLAP 68
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ LF+A+R E L QGI E+ N + +DRY FS +A+ A
Sbjct: 69 ETMTRLFAADRCEHIYGL-----QGILKEV---------NDGRAVFSDRYVFSSLAYQTA 114
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD--ERYEQTDFQRKVAENYE 184
D++ G P P+ + F L + ++ R G + E YE+ FQ KV + Y+
Sbjct: 115 AGAADLAKL--QNDGFPLPEFLFFFDLPVDISMNRVMGRSNVLEIYEEKTFQYKVQDEYK 172
Query: 185 KLKD 188
K+ D
Sbjct: 173 KIID 176
>gi|414173439|ref|ZP_11428202.1| thymidylate kinase [Afipia broomeae ATCC 49717]
gi|410892091|gb|EKS39887.1| thymidylate kinase [Afipia broomeae ATCC 49717]
Length = 230
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 87/215 (40%), Gaps = 42/215 (19%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST----GHIIDEYL 59
Q PRG FI FEG + SGK+TQ + L D LN + RTI+T G E +
Sbjct: 9 QPPRGRFITFEGGEGSGKSTQIQLLADRLNAAKL---------RTITTREPGGSAGAEIV 59
Query: 60 RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRY 117
R HLL S P L+ + H S E L QG DR+
Sbjct: 60 R----------HLLLSGMAKAFGPETESLLFAAARDD--HVSQVIEPALAQGLWVLCDRF 107
Query: 118 SFSGVAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLN-----EEALQRRKGFGDER 169
+ S + +D + E+ G KPD ++ + E AL+RR +R
Sbjct: 108 TDSTRVYQGELGKVDPTLIRAMERVTIGNLKPDLTVILDVPVSVGMERALKRRGTAVPDR 167
Query: 170 Y--EQTDFQRKVAENYEKLKDN-----IWIDIDAD 197
+ E F K+ E Y K+ ++ +D DAD
Sbjct: 168 FEGEGVSFHEKLREAYRKIAESDPQRCALVDADAD 202
>gi|333988072|ref|YP_004520679.1| thymidylate kinase [Methanobacterium sp. SWAN-1]
gi|333826216|gb|AEG18878.1| Thymidylate kinase [Methanobacterium sp. SWAN-1]
Length = 191
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS-TGHIIDEYLRKKIELPD- 67
+I EG D SGK+TQ K L +L N + + + T S G +I E LR +
Sbjct: 2 YICLEGIDGSGKSTQIKLLEQWL--YNCGHEVLRVFEPTDSKVGRLIREMLRNPHATDEN 59
Query: 68 --QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
+ LLF+A+R T L+++ I E+ + +DR +S +A+
Sbjct: 60 FQRTLGLLFAADR-------TILMDKIIDAEVEGKVV----------ISDRCFYSSIAYQ 102
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENYE 184
E W Q K KPD VLL L E AL R + G + +E F K+ + Y
Sbjct: 103 NGAE-----WLSQINKFARKPDLVLLLDLEPETALMRCE--GKDSFEDRSFLEKIRKKYL 155
Query: 185 KL-KDNIWIDIDADKDIDTLGLIVKDIV 211
KL K+ + ++A+ I+ + +K IV
Sbjct: 156 KLAKEEEFFVVNANNGINKVHEDIKRIV 183
>gi|374308296|ref|YP_005054727.1| dTMP kinase [Filifactor alocis ATCC 35896]
gi|291166624|gb|EFE28670.1| dTMP kinase [Filifactor alocis ATCC 35896]
Length = 226
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 65/164 (39%), Gaps = 32/164 (19%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
+G IV EG D SGK TQ+ L YL+ IP + V+FP+ + ++ YL +
Sbjct: 2 KGKLIVIEGTDGSGKETQSNLLYQYLSDRGIPCRIVHFPNYNSPSSSLVKMYLAGEFGTE 61
Query: 64 --ELPDQAAHLLFSANRWEREPT-LTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ A + ++ +R+ T EQG + + DRY S
Sbjct: 62 ADSVSPYIASIFYAGDRYASWKTDWMSFYEQGGVVIV-----------------DRYVMS 104
Query: 121 GVAFSAAK------EGMDISWCFQPEK---GLPKPDAVLLFKLN 155
+ A+K + W + E LPKPD + ++
Sbjct: 105 NLIHQASKLKTTEEKNQFRDWLYDLEYHIFSLPKPDMTIFLHVD 148
>gi|116073928|ref|ZP_01471190.1| Thymidylate kinase [Synechococcus sp. RS9916]
gi|116069233|gb|EAU74985.1| Thymidylate kinase [Synechococcus sp. RS9916]
Length = 215
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 32/218 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG F+V EG D GKTTQ ++L ++L + + G + + LR+ + P
Sbjct: 5 RGRFLVMEGIDGCGKTTQMQRLAEWLPGSGLMPSGAQLVQTREPGGTPLGQALRQLLLHP 64
Query: 67 DQAAH-------LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
+A LL++A+R + ++Q I + +DR++
Sbjct: 65 PEAVAPGPVAELLLYAADR-------AQHVDQVIRPALARGDW---------VISDRFAG 108
Query: 120 SGVAFSAAKEGMDISWCFQPEK----GLPKPDAVLLFKLNEEALQ-RRKGFGDERYEQTD 174
S +A+ ++ Q E+ GL +PDA L L Q RR ++R E
Sbjct: 109 STLAYQGYGRELNRELIVQLEQIATTGL-QPDATFLLDLPLAVSQARRADQANDRIEAAG 167
Query: 175 --FQRKVAENYEKL-KDNIWIDIDADKDIDTLGLIVKD 209
F ++V+E + L W IDAD+ D + ++D
Sbjct: 168 QAFLQRVSEGFRVLAAGRGWWCIDADQVPDAVTAQIRD 205
>gi|167753463|ref|ZP_02425590.1| hypothetical protein ALIPUT_01737 [Alistipes putredinis DSM 17216]
gi|167658088|gb|EDS02218.1| dTMP kinase [Alistipes putredinis DSM 17216]
Length = 225
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 77/204 (37%), Gaps = 50/204 (24%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST-GHIIDEYLRKKIELPDQ 68
IV EG D +GK+TQ + + + + S F++FP G +I +LR ++ D+
Sbjct: 2 LIVLEGLDGAGKSTQVELVRRMFAQEGVESHFLHFPRFDAPVYGELIARFLRGELGAVDK 61
Query: 69 A----AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
LLF+ +R + L ++ G DRY +S V F
Sbjct: 62 VDPYLVALLFAGDRADAAAQLRCWLDAG-----------------HAVVLDRYVYSNVGF 104
Query: 125 SAAKEG------------MDISWCFQPEKGLPKPDAVLL----FKLNEEALQRRKGFGDE 168
AK +D+ + + G+P+PD L F E+ L + D
Sbjct: 105 QCAKLPAGDRQEELRRWILDLEFGYY---GIPRPDVSLFLDVPFAFTEKKLSEVREGDDR 161
Query: 169 RY---------EQTDFQRKVAENY 183
Y D QR+V E Y
Sbjct: 162 EYLKGERDIHEASLDLQRRVREVY 185
>gi|433451897|ref|ZP_20412874.1| thymidylate kinase [Mycoplasma sp. G5847]
gi|431933628|gb|ELK20195.1| thymidylate kinase [Mycoplasma sp. G5847]
Length = 213
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 41/213 (19%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI------ 63
FI FEG D SGKTT K+ + L + N P G +I E +R+ I
Sbjct: 2 FITFEGMDGSGKTTALLKVKEELERLNYQVLVTREP-----GGEMIAEQIRQIILDNKNQ 56
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+ LLF A+R + L K+I+ + I+ +DR+ S A
Sbjct: 57 NMDAWTEALLFIASRNQH---LQKVIKPALQKNII-------------VISDRFIDSTSA 100
Query: 124 FSAAKEGMDISWCFQPEKGLPK---PDAVLLFKLN-EEALQRRKGFGDER-----YEQTD 174
+ + + ++ Q ++ + K PD L F ++ EA +R K G+ EQ+D
Sbjct: 101 YQGSARNIGVNLVNQVQQIVLKDCLPDLTLFFDVSFSEAEKRMKIRGENSKNRLDKEQSD 160
Query: 175 FQRKVAENYEKLKDN----IWIDIDADKDIDTL 203
F++KV + Y +L N I + IDA+KDID +
Sbjct: 161 FKQKVYQGYLELVKNNPERIKV-IDANKDIDQV 192
>gi|408383315|ref|ZP_11180851.1| thymidylate kinase [Methanobacterium formicicum DSM 3637]
gi|407814020|gb|EKF84659.1| thymidylate kinase [Methanobacterium formicicum DSM 3637]
Length = 191
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 38/211 (18%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP--- 66
+I EG D SGK+TQ + L +L K + + P T + +RK ++ P
Sbjct: 2 YICLEGIDGSGKSTQLECLGKWLEKCGLSVTRIREP-----TDSPVGRLIRKMLQDPGAQ 56
Query: 67 ----DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+ LLF+A+R ++ ++ E+ +++ +DR +S +
Sbjct: 57 DEGFQRTLALLFAADR-----------------TLLMDTICKEEKMNRIVLSDRSFYSSL 99
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAE 181
A+ ++E W Q + +PD V+L L E AL R + G + +E+ +F V +
Sbjct: 100 AYQNSEE-----WIAQINQHALEPDLVILLDLEIETALTRCE--GTDSFEEANFLESVRQ 152
Query: 182 NYEKL-KDNIWIDIDADKDIDTLGLIVKDIV 211
Y KL + + ++ ++A ++ + +K IV
Sbjct: 153 KYLKLAQQHGFMVVNAGNGVNKVHSDIKRIV 183
>gi|123965393|ref|YP_001010474.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9515]
gi|166223101|sp|A2BUA6.1|KTHY_PROM5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|123199759|gb|ABM71367.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9515]
Length = 210
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 30/224 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
+G FIV EG D GKTTQ ++ +L + + + G ++ + LR I
Sbjct: 2 KGKFIVIEGIDGCGKTTQIDEISRWLPTSGLMGKNSKLIKTREPGGSLLGKKLRNLILDN 61
Query: 64 ---ELPDQAAH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
P A LL+SA+R E ++K+I + E +DR+S
Sbjct: 62 NKNNKPSSLAELLLYSADRAEH---VSKIISPALKKE-------------DWVISDRFSD 105
Query: 120 SGVAFSAAKEGMDISWCFQPEKGLPK---PDAVLLFKLN-EEALQRRKGFGDERYEQ--T 173
S +A+ +++ E + + PD + +++ EE++ RRK F +R E
Sbjct: 106 STLAYQGYGRHINLEIIKNIESIVCQGEYPDLTIFLEISAEESILRRKNFVPDRMESEGI 165
Query: 174 DFQRKVAENYEKL-KDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
+F +KV E ++ + K+ W I A ++I + +K+ ++ T +
Sbjct: 166 NFLQKVNEGFKLIAKEKKWKVISATQNITAISNEIKETLLKTFR 209
>gi|451970023|ref|ZP_21923252.1| thymidylate kinase [Treponema denticola US-Trep]
gi|451701085|gb|EMD55565.1| thymidylate kinase [Treponema denticola US-Trep]
Length = 209
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 22/184 (11%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS--TGHIIDEYLRKKIELPD 67
F+VFEG D SG T+Q + L + + S V+F S G +I L+ +L
Sbjct: 6 FVVFEGIDGSGTTSQIRLLKERFESED-KSSLVSFTQEPTSGPIGTLIRSALQGSFKLAP 64
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ LF+A+R E L QGI E+ N + +DRY FS +A+ A
Sbjct: 65 ETMTRLFAADRCEHIYGL-----QGILKEV---------NDGRAVFSDRYVFSSLAYQTA 110
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD--ERYEQTDFQRKVAENYE 184
D++ G P P+ + F L + ++ R G + E YE+ FQ KV + Y+
Sbjct: 111 AGAADLAKL--QNDGFPLPEFLFFFDLPVDISMNRVMGRSNVLEIYEEKTFQYKVQDEYK 168
Query: 185 KLKD 188
K+ D
Sbjct: 169 KIID 172
>gi|254457836|ref|ZP_05071263.1| thymidylate kinase [Sulfurimonas gotlandica GD1]
gi|373868852|ref|ZP_09605250.1| thymidylate kinase [Sulfurimonas gotlandica GD1]
gi|207085229|gb|EDZ62514.1| thymidylate kinase [Sulfurimonas gotlandica GD1]
gi|372470953|gb|EHP31157.1| thymidylate kinase [Sulfurimonas gotlandica GD1]
Length = 190
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 26/156 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
+I EG D +GK+TQ +KL K N P + + G I E + +A
Sbjct: 2 YIAIEGIDTAGKSTQIQKL-----KENFPDAIITKEPGATAIGKEIREIVLSAKAQSKKA 56
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF A+R E H E NLD+ +DR + SGVA++ +
Sbjct: 57 EFLLFLADRAE------------------HIKEVVEPNLDKMIISDRSAVSGVAYALIQG 98
Query: 130 GMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRR 162
+ + + G P V L KL +E L+ R
Sbjct: 99 EISETAIVHLNRFATGGIYPQKVFLLKLTKEELEYR 134
>gi|91773625|ref|YP_566317.1| thymidylate kinase [Methanococcoides burtonii DSM 6242]
gi|121691672|sp|Q12VF9.1|KTHY_METBU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|91712640|gb|ABE52567.1| Thymidylate kinase [Methanococcoides burtonii DSM 6242]
Length = 201
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 33/205 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL- 65
+G I EG D SGK+T + L N+ P+ F N T I + + K I+
Sbjct: 2 KGKLITLEGIDGSGKSTITRFL------NSHPA-FANAVFTKEPTTSWIGDAVYKAIQSD 54
Query: 66 PDQAAHL-LFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
D+ A L LF+A+ + TL + IE+G + + ++ RY++ GV
Sbjct: 55 TDELAELMLFTADHADHISTLIRPAIEEGKIV------------ISDRYSDSRYAYQGVT 102
Query: 124 FSAAKEGMD--ISWCFQPEKGLPK-PDAVLLFKLNEE-ALQRRKGFGDE-RYEQTDFQRK 178
KE M+ + W +G PD LLF ++ A+QR G++ ++E+TD +
Sbjct: 103 L---KERMEEPMEWIQMIHRGWTIIPDLTLLFDIDPAVAVQRCGKRGEQTKFEKTDLLKG 159
Query: 179 VAENYEKLKDN---IWIDIDADKDI 200
V ENY KL + ++ ID D+D+
Sbjct: 160 VRENYLKLAEKEPERFVVIDTDRDL 184
>gi|150402215|ref|YP_001329509.1| thymidylate kinase [Methanococcus maripaludis C7]
gi|166221755|sp|A6VFY2.1|KTHY_METM7 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|150033245|gb|ABR65358.1| dTMP kinase [Methanococcus maripaludis C7]
Length = 199
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 90/211 (42%), Gaps = 38/211 (18%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIVFEG D GKTTQAK + + LN ++F F G I E L + +
Sbjct: 4 FIVFEGIDGCGKTTQAKLIAEKLN-----AKF-TFEPTDGKIGKSIREILSGS-KCQKET 56
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R E H S E +DRY +S + + + +
Sbjct: 57 LALLFAADRVE------------------HVSKIEEDLKKSHVVSDRYVYSSIVYQMS-Q 97
Query: 130 GM--DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKLK 187
G+ D + P +L LN EAL+R + E +E+ + Q+K+ E Y L
Sbjct: 98 GIPKDFIYTINDYAKTPDLVVLLDVDLN-EALKRMESREKEIFEKIEIQKKIKEGYYSL- 155
Query: 188 DNIWIDIDADKDIDTLGLIVKDIVIDTIKKS 218
I+ + +K + G I+IDT KS
Sbjct: 156 ----INSENEKFMPKYGF----IIIDTTSKS 178
>gi|78183894|ref|YP_376328.1| thymidylate kinase [Synechococcus sp. CC9902]
gi|123582163|sp|Q3B043.1|KTHY_SYNS9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|78168188|gb|ABB25285.1| thymidylate kinase [Synechococcus sp. CC9902]
Length = 209
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 30/223 (13%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI---- 63
G FIV +G D GK+TQ + L +L + + G + + +R+ +
Sbjct: 3 GRFIVLDGIDGCGKSTQIRHLAQWLPASGLMPSTAQLICTREPGGTPLGQSIRELLLHTE 62
Query: 64 --ELPDQAAH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
++P A LL++A+R Q + I + L + L +DR++ S
Sbjct: 63 ADQVPSVTAELLLYAADR-----------AQHVDTVIRPALLRGDWVL-----SDRFAGS 106
Query: 121 GVAFSAAKEGMDISWCFQPEK----GLPKPDAVLLFKLNEEALQRRKGFGDERYEQTD-- 174
+A+ G+D + E GL L E +LQRR G ++R E
Sbjct: 107 TLAYQGYGRGLDRQLITRLESIATTGLEPDLTAWLMVPVEVSLQRRHGEKEDRIEAEGRA 166
Query: 175 FQRKVAENYEKLKDNI-WIDIDADKDIDTLGLIVKDIVIDTIK 216
F R+VA+ + L + W IDA + + L +++ + +T++
Sbjct: 167 FLRRVADGFAVLAEQRNWSQIDAQQSVSKLSQVLEQTLRETLQ 209
>gi|373457366|ref|ZP_09549133.1| Thymidylate kinase [Caldithrix abyssi DSM 13497]
gi|371719030|gb|EHO40801.1| Thymidylate kinase [Caldithrix abyssi DSM 13497]
Length = 211
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KIELPDQ 68
FI FEG D SGK+TQ + L YL + P T + I D L K I + D+
Sbjct: 6 FISFEGLDYSGKSTQIRLLEKYLTDRGYQVFTIREPGGTTISEKIRDILLDKTHINMTDR 65
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
L+SA R +L+++ I + ++ D DRY S A+
Sbjct: 66 CELFLYSAAR-------VQLVKEKI-IPLLQK--------DYFILADRYVDSTTAYQGFG 109
Query: 129 EGMDISWCFQPEKGLP---KPDAVLLFKLNEEALQRR---KGFGDERYEQTD--FQRKVA 180
G+D++ Q + P + E + RR G +R E F RKV
Sbjct: 110 RGLDLNMVEQINQAATFGILPGTTFYLRFAPEQIARRMQKSGRESDRLESAGNAFYRKVF 169
Query: 181 ENYEKL----KDNIWIDIDADKDIDTL-GLIVKDIVIDTIKK 217
+ YE L KD + IDA+ I+ + ++VK+++ T K
Sbjct: 170 QGYEILAEKNKDRFCV-IDANLSIEQIHHIVVKNLIQRTTGK 210
>gi|427706814|ref|YP_007049191.1| thymidylate kinase [Nostoc sp. PCC 7107]
gi|427359319|gb|AFY42041.1| thymidylate kinase [Nostoc sp. PCC 7107]
Length = 209
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 33/224 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP- 66
G IVFEG + GKTTQ + +L I P T H+ L K + P
Sbjct: 3 GKLIVFEGVEGCGKTTQMQLCGQWLESLGISVVVTREPGGTELGSHLRRLLLEKSEDKPV 62
Query: 67 -DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVA 123
D LL++A+R + H E + NL G DRY+ S VA
Sbjct: 63 ADVTELLLYAADRAQ------------------HVEQELKPNLAVGRYILCDRYTDSTVA 104
Query: 124 FSAAKEGMDISWCFQ----PEKGLPKPDAVLLFKLNEEALQRRKG--FGDERYEQ--TDF 175
+ G+++S Q GL + L E L R+ G G +R EQ F
Sbjct: 105 YQGYGRGLNMSLIEQLNYIATSGLTSDLTIWLDVDVEVGLSRKHGEAVGLDRIEQEAITF 164
Query: 176 QRKVAENYEKLKD---NIWIDIDADKDIDTLGLIVKDIVIDTIK 216
R+V + Y +L + + +D +T+ ++++I+ D ++
Sbjct: 165 HRRVQQGYSQLAAAHPSRIVRVDGSLSKETVHSLIQEILRDRLQ 208
>gi|449104174|ref|ZP_21740915.1| thymidylate kinase [Treponema denticola AL-2]
gi|449108423|ref|ZP_21745066.1| thymidylate kinase [Treponema denticola ATCC 33520]
gi|449119097|ref|ZP_21755496.1| thymidylate kinase [Treponema denticola H1-T]
gi|449121488|ref|ZP_21757835.1| thymidylate kinase [Treponema denticola MYR-T]
gi|449124624|ref|ZP_21760943.1| thymidylate kinase [Treponema denticola OTK]
gi|448942955|gb|EMB23849.1| thymidylate kinase [Treponema denticola OTK]
gi|448950087|gb|EMB30910.1| thymidylate kinase [Treponema denticola MYR-T]
gi|448951023|gb|EMB31839.1| thymidylate kinase [Treponema denticola H1-T]
gi|448961504|gb|EMB42205.1| thymidylate kinase [Treponema denticola ATCC 33520]
gi|448963692|gb|EMB44368.1| thymidylate kinase [Treponema denticola AL-2]
Length = 213
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 20/183 (10%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS--TGHIIDEYLRKKIELPD 67
F+VFEG D SG T+Q + L + + S V+F S G +I L+ +L
Sbjct: 10 FVVFEGIDGSGTTSQIRLLKERFESED-KSSLVSFTQEPTSGPIGTLIRSALQGSFKLAP 68
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ LF+A+R E L QGI ++ N + +DRY FS +A+ A
Sbjct: 69 ETMTRLFAADRCEHIYGL-----QGILKQV---------NDGRAVFSDRYVFSSLAYQTA 114
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGD--ERYEQTDFQRKVAENYEK 185
D++ Q E + ++ R G + E YE+ FQ KV + Y+K
Sbjct: 115 AGAADLA-KLQNEGFPLPEFLFFFDLPVDISMNRVMGRSNVLEIYEEKTFQYKVQDEYKK 173
Query: 186 LKD 188
+ D
Sbjct: 174 IID 176
>gi|398331025|ref|ZP_10515730.1| thymidylate kinase [Leptospira alexanderi serovar Manhao 3 str. L
60]
Length = 157
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 30/169 (17%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT-ISTGHIIDEYLRKK 62
+I + F VFEG D SGK+T K L + L + I S VNF + T TG + ++LR +
Sbjct: 2 KIEKPIFAVFEGIDGSGKSTLCKSLTERLTERGISS--VNFTEPTNFETGEYLRKFLRGE 59
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
IEL + F +R E + Q I SLE+ +N+ DRY +S
Sbjct: 60 IELGREEQINAFLNDREES-------LRQNIL-----PSLESGRNV----LLDRYMYSTA 103
Query: 123 AFSAAKEGMDISWCFQPEKGLPK----PDAVLLFKLNE----EALQRRK 163
A+ + ++ + S EK L + PD + LN E L RRK
Sbjct: 104 AYQSGEDLLPESII---EKNLNRNFRIPDLLFYLDLNPVIAFERLSRRK 149
>gi|428774343|ref|YP_007166131.1| thymidylate kinase [Cyanobacterium stanieri PCC 7202]
gi|428688622|gb|AFZ48482.1| thymidylate kinase [Cyanobacterium stanieri PCC 7202]
Length = 209
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 39/217 (17%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK- 62
+I +G FIVFEG D +G +TQA+ L DY K S P G ++ +L K
Sbjct: 2 KIHKGLFIVFEGVDGAGSSTQAQMLQDYFTKVGQKSVISPEPSSG-PIGKLLRTFLGGKN 60
Query: 63 ----IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLE-----NEKNLDQGCT 113
+L DQ LF+A+R ++++L+ N KN+ T
Sbjct: 61 DFDDQDLYDQQMAYLFAADRHYH----------------LYNNLDGVYDLNAKNIHVIST 104
Query: 114 NDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLF----KLNEEALQRRKGFGDER 169
RY FS +A++ K D + + P PD V+ KL E ++ R E
Sbjct: 105 --RYYFSSLAYN-GKTKKDYDFVSILNQKFPPPDLVIYLDIPVKLALERMENRP--SKEI 159
Query: 170 YEQTDFQRKVAENYEKLKDNI---WIDIDADKDIDTL 203
YE + KV E + ++ N + IDA ++ +T+
Sbjct: 160 YETQEKLLKVRERFSEIFANYPHKILKIDAKENQNTI 196
>gi|422341116|ref|ZP_16422057.1| thymidylate kinase [Treponema denticola F0402]
gi|325474687|gb|EGC77873.1| thymidylate kinase [Treponema denticola F0402]
Length = 209
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 20/183 (10%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS--TGHIIDEYLRKKIELPD 67
F+VFEG D SG T+Q + L + + S V+F S G +I L+ +L
Sbjct: 6 FVVFEGIDGSGTTSQIRLLKERFESED-KSSLVSFTQEPTSGPIGTLIRSALQGSFKLAP 64
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ LF+A+R E L QGI ++ N + +DRY FS +A+ A
Sbjct: 65 ETMTRLFAADRCEHIYGL-----QGILKQV---------NDGRAVFSDRYVFSSLAYQTA 110
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGD--ERYEQTDFQRKVAENYEK 185
D++ Q E + ++ R G + E YE+ FQ KV + Y+K
Sbjct: 111 AGAADLA-KLQNEGFPLPEFLFFFDLPVDISMNRVMGRSNVLEIYEEKTFQYKVQDEYKK 169
Query: 186 LKD 188
+ D
Sbjct: 170 IID 172
>gi|291522522|emb|CBK80815.1| thymidylate kinase [Coprococcus catus GD/7]
Length = 223
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 46/195 (23%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR----KKIEL 65
FIV EG D SGK TQ++ L++ + + I ++ ++FP+ + ++ YL K+ ++
Sbjct: 3 FIVIEGNDGSGKATQSQLLLETMLEKGIDARKLSFPNYQSDSSALVKGYLAGRYGKRDDI 62
Query: 66 PDQAAHLLFSANR-------WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
AA ++A+R W+R+ KLI DRY+
Sbjct: 63 SPYAAASFYAADRIASYMEDWKRDYEKGKLI-----------------------IADRYT 99
Query: 119 FSGVAFSAAKEGMD-----ISWCFQPEK---GLPKPDAVLLFKLNE----EALQRRKGFG 166
S + A+ + W ++ E GLP+PD V+ ++ + +++R
Sbjct: 100 TSNAIYQCARLPRMRRRRFLQWLYEYEYDLLGLPEPDMVIYLDVDPDISMQLIEQRGEKK 159
Query: 167 DERYEQTDFQRKVAE 181
D E ++ R+V E
Sbjct: 160 DIHEEDAEYMRQVHE 174
>gi|406950288|gb|EKD80571.1| Thymidylate kinase [uncultured bacterium]
Length = 368
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS-TGHIIDEYLRKKIEL 65
+G IV +G D SGK TQ L+ YL++ +++++FP S G ++ YL +
Sbjct: 143 KGKLIVIDGTDGSGKGTQTDLLLKYLDQQKKKNKYIDFPRYYTSFHGQMVGRYLAGEFGT 202
Query: 66 PDQA----AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+ A + L ++ +R + +E+G T+ +RY+ S
Sbjct: 203 KESASPYLSSLFYAMDRLTARDEIIDWLEEGNTV-----------------VANRYTTSS 245
Query: 122 VAFSAA-----KEGMDISWCFQ---PEKGLPKPDAVLLFKLNEEALQR 161
+AF A K + W ++ E LPK D V+ + E Q+
Sbjct: 246 MAFQTARVEKSKREEFLKWLYEMEYKEHKLPKEDVVIFLYVPVEISQK 293
>gi|160893397|ref|ZP_02074183.1| hypothetical protein CLOL250_00947 [Clostridium sp. L2-50]
gi|156864972|gb|EDO58403.1| dTMP kinase [Clostridium sp. L2-50]
Length = 211
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 36/196 (18%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
+G FI EG D +GKTTQ + L DYLNK P G+ + E +R+ I
Sbjct: 5 QGIFITMEGPDGAGKTTQIELLKDYLNKKGYDVLITRDPG-----GNAVSEAIREVILNK 59
Query: 64 ---ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
E+ LL++A R +L+++ I + + + DR+ S
Sbjct: 60 DFTEMGYMTELLLYAAAR-------AQLVKENIKPAL---------SAGKAVIADRFVDS 103
Query: 121 GVAFSAAKEGMDISWCFQPE----KGLPKPDAVLLFKLNEEA-LQRRKGFGD-ERYEQ-- 172
+ G+ I ++ +G+ PD L L+ EA + R+K + +R EQ
Sbjct: 104 SAVYQGIGRGLGIDTVYKVNEFALQGI-LPDMTFLMDLDAEAGIARKKNQAELDRMEQES 162
Query: 173 TDFQRKVAENYEKLKD 188
+F +KV E Y L +
Sbjct: 163 LEFHKKVVEGYRCLAE 178
>gi|160933042|ref|ZP_02080431.1| hypothetical protein CLOLEP_01884 [Clostridium leptum DSM 753]
gi|156868116|gb|EDO61488.1| dTMP kinase [Clostridium leptum DSM 753]
Length = 222
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ RG IV EG D SGK TQ L YL + + FPD + ++ YL K+
Sbjct: 1 MARGKLIVMEGLDGSGKATQTGLLCQYLESRGRRVRHIEFPDYREPSSALVKMYLNKEFG 60
Query: 64 ----ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRY 117
++ AA ++ +R+ + K+ G T DRY
Sbjct: 61 SNPGDVNAYAASSFYAVDRYASFLRFWR------------------KDYLSGATIVADRY 102
Query: 118 SFSGVAFSAAKEGMD-----ISWCFQPEKG---LPKPDAVLLFKLNEEALQR---RKGFG 166
+ S + K + ++W E G LP+PD VL + E QR + G
Sbjct: 103 TTSNAVYQMEKTPREDWNKYLAWLQDYEYGKLQLPRPDLVLFLDMPTEISQRLLSGRYAG 162
Query: 167 DER 169
DER
Sbjct: 163 DER 165
>gi|78188893|ref|YP_379231.1| thymidylate kinase [Chlorobium chlorochromatii CaD3]
gi|123579949|sp|Q3AS37.1|KTHY_CHLCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|78171092|gb|ABB28188.1| thymidylate kinase [Chlorobium chlorochromatii CaD3]
Length = 222
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 93/239 (38%), Gaps = 46/239 (19%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
I FEG D +GK+TQ KLV YL + + P + P T + I L + + A
Sbjct: 2 LITFEGIDGAGKSTQVAKLVAYLKQQSTPLLSLREPGGTPTAESIRSLLLDNRKSITPIA 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTN--DRYSFSGVAFSAA 127
LLFSA+R E TL + L +G T DR+ S A+
Sbjct: 62 ELLLFSASRAELVETLIR------------------PALAEGKTVILDRFFDSTTAYQGH 103
Query: 128 KEGMDISWC---FQPEKGLPKPDAVLLFKLN-EEALQR---RKGFG---------DERYE 171
G+ + G PD L EEAL+R R G +R E
Sbjct: 104 GRGISLEQLHSIIALSTGDLLPDVTFYLDLEPEEALRRAFSRSGLPLDFAAQSNESDRME 163
Query: 172 QTD--FQRKVAENYEKL---KDNIWIDIDADKDIDTLGLIVKDIV--IDTIKKSQFSPL 223
Q F KV Y L + ++ +DA + DTL + I+ ++T K SPL
Sbjct: 164 QAGIAFYHKVRNGYLTLMQQHPSRFVALDATQPPDTLH---QHIIAEVETRLKLHISPL 219
>gi|325958282|ref|YP_004289748.1| thymidylate kinase [Methanobacterium sp. AL-21]
gi|325329714|gb|ADZ08776.1| Thymidylate kinase [Methanobacterium sp. AL-21]
Length = 191
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 37/188 (19%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQ- 68
+I EG D SGKTTQ K L ++ K I V P T + + + +RK ++ PD
Sbjct: 2 YICLEGIDGSGKTTQIKLLESWIQKCGIDVLRVFEP-----TDNEVGKLIRKLLQNPDAI 56
Query: 69 ------AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
LLF+A+R ++ + + L + +DR +S +
Sbjct: 57 NENFQITLALLFAADR-----------------TVLMRDITEAEALAKIVISDRSFYSSM 99
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAE 181
+ E W + K +PD V+L +N E A+ R G + +E+ +F A+
Sbjct: 100 VYQNDSE-----WIAEINKHAKQPDLVILLDINPETAVSRCDGM--DSFEEQNFLASTAK 152
Query: 182 NYEKLKDN 189
Y +L D+
Sbjct: 153 KYLELADH 160
>gi|163782656|ref|ZP_02177653.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882229|gb|EDP75736.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1]
Length = 200
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 26/179 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
I FEG D SGKTTQ+KKL ++L + + P T + D + K EL ++
Sbjct: 2 LITFEGIDGSGKTTQSKKLYEFLREKGLDVSLYREPGGTPLGEELRDILINK--ELNERT 59
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF R + + LE + +E DR++ S +A+
Sbjct: 60 ELLLFEGARTQ------------LVLERLKPDMER----GMVVILDRFTDSTLAYQGYGR 103
Query: 130 GMDISWCFQPEK----GLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENY 183
G+D+ + + + G+ KPD L + E A+ R + R++ DF +KV E +
Sbjct: 104 GLDLEFVKKLNEFASFGI-KPDITFLLDIEPETAVGRIR--EKSRFDNVDFLKKVREGF 159
>gi|300087976|ref|YP_003758498.1| thymidylate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527709|gb|ADJ26177.1| thymidylate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 207
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 27/193 (13%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR-KKI 63
+ +G FI FEGC+ +GK+TQA L L N + + P T G I L+ KI
Sbjct: 1 MKQGKFITFEGCEGAGKSTQAGLLAGMLASNGMKTILTREPGGT-PLGEEISRLLKWGKI 59
Query: 64 ELPDQAAH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
D + LLF+A+R E + ++ +L+ K + DR++ S +
Sbjct: 60 GDIDALSELLLFNASRAE------------LVFTVIEPALKAGKIV----ICDRFTDSSL 103
Query: 123 AFSAAKEGMDISWCFQ----PEKGLPKPDAVLLFKLNEEALQRRKGFG-DERYEQT--DF 175
+ G+ + +GL KPD +L + Q RK +R+EQ +F
Sbjct: 104 VYQGGGRGLSTETVIRVNDIATRGL-KPDMTILLDIPISTGQHRKSNSVADRFEQEADEF 162
Query: 176 QRKVAENYEKLKD 188
+ V ++Y L +
Sbjct: 163 HKSVRQSYLALAE 175
>gi|195952508|ref|YP_002120798.1| dTMP kinase [Hydrogenobaculum sp. Y04AAS1]
gi|195932120|gb|ACG56820.1| dTMP kinase [Hydrogenobaculum sp. Y04AAS1]
Length = 200
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
+ I + IVFEG D SGK+TQ + + L N+ + + P T G I + L+ +
Sbjct: 4 TTIQKPYIIVFEGIDGSGKSTQINIVYELLKYENV--KLLREPGST-EMGEKIRDILKSQ 60
Query: 63 IELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+L + L A+R H ++ K + DRY +S +
Sbjct: 61 -KLDPKTQTFLIEASR-------------------AHMIEKHFKGFEGILLLDRYIYSTI 100
Query: 123 AFSAAKEGMDISWCFQPEKGLPK-------PDAVLLFKLN-EEALQRRKGFGDERYEQTD 174
A+ G+DI++ K L PD V LF ++ AL+R K D +E +
Sbjct: 101 AYQGYGFGIDINFL----KALNDFVCDIYIPDIVFLFDIDPRTALERLKREKD-MFEDLE 155
Query: 175 FQRKVAENYEKL-KDNIWIDIDADKDIDTL 203
F +KV + Y KL K+ + IDA K+++ +
Sbjct: 156 FLKKVRDGYLKLAKEYNFYTIDASKNVEAI 185
>gi|258510140|ref|YP_003183574.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257476866|gb|ACV57185.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 213
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 32/226 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR--KKIE 64
+G I FEG D +GKTTQ +L +L +P P T G + L + E
Sbjct: 3 KGLLITFEGIDGAGKTTQLLRLAAWLEAQGLPVIVTREPGGT-RIGDAVRAILLDPRHQE 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ + LL++A+R + +E+ I + + DR+ + +A+
Sbjct: 62 MAPRTEALLYAASR-------AQHVEELIRPALARGEI---------VLCDRFVDASIAY 105
Query: 125 SAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRR-----KGFGDERYEQTD-- 174
A G+ +W + G +PD L F L+ + R +G G +R E+ D
Sbjct: 106 QGAGLGLGEAWVEALNEYALGGLRPDLTLWFDLDWPTARSRLRARAEGGGLDRIERRDEA 165
Query: 175 FQRKVAENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
F +VA+ +E+L + IDA + D + ++ +V + I++
Sbjct: 166 FFERVADAFERLWRAAPEVRKRIDAARSPDDIEQEIRALVWNLIQQ 211
>gi|389842946|ref|YP_006345026.1| thymidylate kinase [Mesotoga prima MesG1.Ag.4.2]
gi|387857692|gb|AFK05783.1| thymidylate kinase [Mesotoga prima MesG1.Ag.4.2]
Length = 209
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 79/184 (42%), Gaps = 23/184 (12%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI EG D GKTTQ K L +YL++ ++ V P T + I D L K+ L ++
Sbjct: 2 FISVEGIDGCGKTTQIKLLAEYLSQLDVEFIIVREPGGTKAGEEIRDILLHKEYHLFSES 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA-- 127
LLF A R + I E++ LE K + DR+ S VA+
Sbjct: 62 ELLLFMAARAQ------------IVREVIRPELEKGKTV----IADRFMDSSVAYQGVGR 105
Query: 128 KEGMDISWCFQP-EKGLPKPDAVLLFKL-NEEALQR-RKGFGDERYEQT--DFQRKVAEN 182
+ G +I G PD + + A+ R RK +++ E DF +V E
Sbjct: 106 RLGREIVQAMNAFAVGGTVPDITFYIDVPTDVAISRMRKEKKNDKIEMENFDFFERVREG 165
Query: 183 YEKL 186
YEKL
Sbjct: 166 YEKL 169
>gi|146295779|ref|YP_001179550.1| dTMP kinase [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|259494264|sp|A4XHH4.1|KTHY_CALS8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|145409355|gb|ABP66359.1| dTMP kinase [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 206
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 27/221 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FIVFEG D SGK+TQ K+ YL + P T I L ++
Sbjct: 2 KGKFIVFEGNDGSGKSTQILKVEKYLKEKGYKVVTTREPGGTEVGFRIRKLLLDPAYKMD 61
Query: 67 DQAAHLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
LL +A+R E + L +E G + DRY S + +
Sbjct: 62 GLTEALLLAADRNEHVKNVLIPALEDGYVV-----------------VCDRYILSSIVYQ 104
Query: 126 AAKEGMDISWCFQPEKGLP---KPDAVLLFKLNEE-ALQRRKGFGDE---RYEQTDFQRK 178
G+ + + KPD ++ L+ E ALQR K G E DF RK
Sbjct: 105 GIVRGVGVENIIKLNSIFEEKIKPDLYIILTLSPEIALQRLKMAGKNDKLDTENFDFHRK 164
Query: 179 VAENYEKLKDNI--WIDIDADKDIDTLGLIVKDIVIDTIKK 217
V ++++ ++I+A+ ++ + V+ ++ D +KK
Sbjct: 165 VYNGFKEVSKMFKKCVNIEAEGTVEDVFEKVRKVIDDLLKK 205
>gi|429757768|ref|ZP_19290298.1| dTMP kinase [Actinomyces sp. oral taxon 181 str. F0379]
gi|429174359|gb|EKY15836.1| dTMP kinase [Actinomyces sp. oral taxon 181 str. F0379]
Length = 260
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 38/226 (16%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
+Q RG FI FEG D +GK+TQ +++ + + P T G + + ++
Sbjct: 20 GAQAGRGLFITFEGGDGTGKSTQIQRVRQWFEERGQQVVVTREPGGT-ELGTTLRQLVQN 78
Query: 62 KIELPD-QAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
E D + LL++A+R TL + +E+G + + DRY
Sbjct: 79 GPEDVDPRTEALLYAADRAYHVATLIRPALERGEIVLV-----------------DRYID 121
Query: 120 SGVAFSAAKEGMDIS-------WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ 172
S +A+ A + + W G PD LL + E RR+G +R E+
Sbjct: 122 SSLAYQGAARSLGVDEIRSLSMWA----TGSLLPDLTLLIDVPPEVAARRRGGEPDRMER 177
Query: 173 --TDFQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
+F +V Y L D+ +AD+ + G+ +D V I+
Sbjct: 178 ESMEFHERVRHQYLALADS-----EADRIVVIDGVGTEDQVFSEIR 218
>gi|312137024|ref|YP_004004361.1| thymidylate kinase [Methanothermus fervidus DSM 2088]
gi|311224743|gb|ADP77599.1| thymidylate kinase [Methanothermus fervidus DSM 2088]
Length = 189
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 24/195 (12%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
+I EG D +GK+ Q K L + L K + P + G +I + LRK E+ +
Sbjct: 2 YICIEGIDGAGKSLQVKLLSEKLKKCGYKVIQIKEPTDS-EIGKLIRKLLRK--EVNNAL 58
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R + KL+++G + +DR +S + +
Sbjct: 59 MTLLFAADRIILSEKIKKLLKKGYLV-----------------ISDRCLWSSFVYQSIDI 101
Query: 130 GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAENYEKL-KD 188
G D W + K KPD + ++ + +R E +E + + K Y +L K
Sbjct: 102 GED--WVEEVNKYALKPDITIFLDVDVDVAMKR-CEKKEIFENSSYLNKARRKYLQLAKK 158
Query: 189 NIWIDIDADKDIDTL 203
+ +I IDA+ DI T+
Sbjct: 159 HNFIIIDANNDIKTV 173
>gi|284989206|ref|YP_003407760.1| thymidylate kinase [Geodermatophilus obscurus DSM 43160]
gi|284062451|gb|ADB73389.1| thymidylate kinase [Geodermatophilus obscurus DSM 43160]
Length = 225
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 90/218 (41%), Gaps = 35/218 (16%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKIE 64
PRG FI FEG + +GK+TQ + L ++L P++ P T + + L R
Sbjct: 17 PRGLFIAFEGGEGAGKSTQVRLLCEWLTAQGRPARATFEPGGTPAGAAVRAIVLDRAHTG 76
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
L +A LL++A+R + H+ L + DRY S +A+
Sbjct: 77 LSPRAEALLYAADRAQH----------------AHAVLRPALEAGEVVVTDRYVDSSLAY 120
Query: 125 SAAKE--GMD----IS-WCFQPEKGLPKPDAVLLFKLNEEA----LQRRKGFGDERYEQT 173
A G+D IS W GL +PD +L L E + R E
Sbjct: 121 QGAGRTIGLDDVAAISRWA---TLGL-RPDLTVLLDLPPETGLARARGRAAADRLESESL 176
Query: 174 DFQRKVAENYEKL---KDNIWIDIDADKDIDTLGLIVK 208
+F ++V + + L + ++ +DA + +D L V+
Sbjct: 177 EFHQRVRDTFRTLAAAEPGRYLVLDATRGVDELAADVR 214
>gi|206891148|ref|YP_002248232.1| thymidylate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206743086|gb|ACI22143.1| thymidylate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 209
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 28/209 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FI FEG + SGKTTQ K L + L K + + P T + HI L +I++
Sbjct: 3 KGIFITFEGIEGSGKTTQGKLLAEKLKKEGLKVLYTYEPGDTEAGRHIRKILLNSEIKIN 62
Query: 67 DQAAHLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
LL+ A+R + E + IE G + DR++ S + +
Sbjct: 63 PLCELLLYFADRVQHIEEKIKPCIESGFIV-----------------ICDRFTDSTLVYQ 105
Query: 126 AAKEGMDISWCFQPEKGLP---KPDAVLLFKLNEE-ALQRRKGFG-DERYEQTD--FQRK 178
G+ I Q K + PD +L L+R + +R+E + F K
Sbjct: 106 GYARGISIDLIKQLNKIVLDEFMPDLTVLLDCPANIGLKRNQKINKKDRFEMENLAFHEK 165
Query: 179 VAENYEKLKD---NIWIDIDADKDIDTLG 204
V + Y KL + + +DA + ID +
Sbjct: 166 VRQGYLKLAELYKKRFFVLDATESIDKIA 194
>gi|381398359|ref|ZP_09923763.1| Thymidylate kinase [Microbacterium laevaniformans OR221]
gi|380774325|gb|EIC07625.1| Thymidylate kinase [Microbacterium laevaniformans OR221]
Length = 207
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 32/194 (16%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RG ++ FEG D +GKTTQA +L +L + P T I D L + E
Sbjct: 1 MTRGLWVTFEGGDGTGKTTQATRLETWLREQGRTVVRTREPGGTEVGVLIRDIVLHHRGE 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGV 122
+ +A LL++A+R + TL + L +G DRY S V
Sbjct: 61 VSPRAEALLYAADRAQHVATLVR------------------PALARGEVVIQDRYFDSSV 102
Query: 123 AFSAAKEGMDISWC-----FQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERY-----EQ 172
A+ A +D + E L PD +L L+ +RR D+ + E+
Sbjct: 103 AYQGAGRVLDAEQVRDLSMWATEGAL--PDLTVLLDLDPATARRRLDAADKPFDRLEAEK 160
Query: 173 TDFQRKVAENYEKL 186
++F +V + L
Sbjct: 161 SEFHERVRSAFLAL 174
>gi|284175009|ref|ZP_06388978.1| dTMP kinase [Sulfolobus solfataricus 98/2]
gi|384434298|ref|YP_005643656.1| thymidylate kinase [Sulfolobus solfataricus 98/2]
gi|261602452|gb|ACX92055.1| thymidylate kinase [Sulfolobus solfataricus 98/2]
Length = 189
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 82/197 (41%), Gaps = 35/197 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLN---KNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
I EG D SGKTT A L +YL K N+ F + I L +KI
Sbjct: 4 LIAIEGIDGSGKTTLANLLKEYLESKMKLNVIVTREPFSEDIIK--------LIEKIGWN 55
Query: 67 DQAAH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D LLF+A+R L+K+ +N D DRY FS +A+
Sbjct: 56 DPILLVLLFAADRALHVNWLSKI-----------------RNADLIIL-DRYYFSSIAYQ 97
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENYE 184
A G+D W PKPD V+L L E A+ R K E+ KV E Y
Sbjct: 98 GAL-GVDEKWIKTVNSYFPKPDMVILLDLPIEVAISRIKNDKFNFEEKIKSLAKVREKYL 156
Query: 185 KLKD--NIWIDIDADKD 199
KL N +I +DA+KD
Sbjct: 157 KLAKEYNFYI-VDANKD 172
>gi|218289082|ref|ZP_03493319.1| dTMP kinase [Alicyclobacillus acidocaldarius LAA1]
gi|218240907|gb|EED08085.1| dTMP kinase [Alicyclobacillus acidocaldarius LAA1]
Length = 213
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 29/192 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR--KKIE 64
+G I FEG D +GKTTQ +L +L +P P T G + L + E
Sbjct: 3 KGLLITFEGIDGAGKTTQLLRLAAWLEAQGLPVIVTREPGGT-RIGDAVRAILLDPRHQE 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ + LL++A+R + +E+ I + + DR+ + +A+
Sbjct: 62 MAPRTEALLYAASR-------AQHVEELIRPALARGEI---------VLCDRFVDASIAY 105
Query: 125 SAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRR-----KGFGDERYEQTD-- 174
A G+ +W + G +PD L F L+ + R +G G +R E+ D
Sbjct: 106 QGAGLGLGEAWVEALNEYALGGLRPDLTLWFDLDWPTARSRLRARVEGGGLDRIERRDEA 165
Query: 175 FQRKVAENYEKL 186
F +VA+ +E+L
Sbjct: 166 FFERVADAFERL 177
>gi|449129622|ref|ZP_21765852.1| thymidylate kinase [Treponema denticola SP37]
gi|448945670|gb|EMB26540.1| thymidylate kinase [Treponema denticola SP37]
Length = 213
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 20/183 (10%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS--TGHIIDEYLRKKIELPD 67
F+VFEG D SG T+Q + L + + S V+F S G +I L+ +L
Sbjct: 10 FVVFEGIDGSGTTSQIRLLKERFESED-KSSLVSFTQEPTSGPIGTLIRSALQGSFKLAP 68
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ LF+A+R E L QGI ++ N + +DRY FS +A+ A
Sbjct: 69 ETMTRLFAADRCEHIYGL-----QGILKQV---------NDGRVVFSDRYVFSSLAYQTA 114
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGD--ERYEQTDFQRKVAENYEK 185
D++ Q E + ++ R G + E YE+ +FQ KV + Y+K
Sbjct: 115 AGAADLA-KLQNEGFPLPEFLFFFDLPVDISMNRVMGRSNVLEIYEEKNFQYKVQDEYKK 173
Query: 186 LKD 188
+ D
Sbjct: 174 IID 176
>gi|15805151|ref|NP_293837.1| thymidylate kinase [Deinococcus radiodurans R1]
gi|14285522|sp|Q9RY40.1|KTHY_DEIRA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|6457772|gb|AAF09698.1|AE001873_8 thymidylate kinase [Deinococcus radiodurans R1]
Length = 206
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 28/207 (13%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FI EG + +GKTTQ +L L P T + + L +E+
Sbjct: 4 GLFITLEGPEGAGKTTQLARLEARLRAAGHAVTVTREPGGTPLGTRVREVVLDPAVEIEP 63
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
LL+SA+R + + E++ +LE + + DRY+ S +A+ A
Sbjct: 64 LGEFLLYSASRAQ------------LVREVLRPALERGETV----LCDRYADSSLAYQGA 107
Query: 128 KEGMDISWCFQPEK---GLPKPDAVLLFKLNEE-ALQR--RKGFGDERYEQTD--FQRKV 179
G+ + Q G P +L L+ LQR R+G D R EQ D F R+V
Sbjct: 108 GRGLSLPLLRQITAEVTGGLTPGLTVLLDLDPALGLQRAARRGQPD-RLEQADLTFHRRV 166
Query: 180 AENYEKL---KDNIWIDIDADKDIDTL 203
+ + L + ++ +DA + D L
Sbjct: 167 RQGFLDLAHAEPQRFLVLDATRPEDEL 193
>gi|392412077|ref|YP_006448684.1| thymidylate kinase [Desulfomonile tiedjei DSM 6799]
gi|390625213|gb|AFM26420.1| thymidylate kinase [Desulfomonile tiedjei DSM 6799]
Length = 207
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 34/196 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHI--IDEYLRKKIELPD 67
FIVFEG D SGK+TQA+ L D L++ +IP P S G I + LR + P+
Sbjct: 13 FIVFEGIDGSGKSTQARLLADKLHQADIPVILTAEP----SEGPIGCLIRTLRTRPS-PE 67
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ L + + ++ GI++ DRY +S VA+ A
Sbjct: 68 EERQLFTQDRKDHISRVIAPALKNGISV-----------------ICDRYVYSSVAYQGA 110
Query: 128 KEGMDISWCFQPEKGLP-KPDAVLLFKLN-EEALQ-----RRKGFGDERYEQTDFQRKVA 180
+ G+D + + +PD L ++ +EAL R++ F +E +VA
Sbjct: 111 R-GIDPRQILEENRTFALEPDVTFLLRIGVDEALSRICEGRKEAFTI--FEAKANLERVA 167
Query: 181 ENYEKLKDNIWIDIDA 196
Y+ L D+ IDA
Sbjct: 168 AIYDALDDSHVKKIDA 183
>gi|94986082|ref|YP_605446.1| thymidylate kinase [Deinococcus geothermalis DSM 11300]
gi|94556363|gb|ABF46277.1| Thymidylate kinase [Deinococcus geothermalis DSM 11300]
Length = 210
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 28/207 (13%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G F+ FEG + +GK+TQ +L L + P P T + + L + +
Sbjct: 4 GLFVTFEGPEGAGKSTQLARLAQRLAETGRPPVTTREPGGTPLGMRVREVLLDPALTIDP 63
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
LL+SA+R + + +++ +L Q DRY+ S +A+ +
Sbjct: 64 LPEFLLYSASRAQ------------LVRDVIRPALAA----GQVVLCDRYADSSLAYQGS 107
Query: 128 KEGMDISWCF----QPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYEQTD--FQRKV 179
G+D ++ + GL +PD +L L+ L R G +R E+ D F R+V
Sbjct: 108 GRGLDPAFLAALTGEVTGGL-QPDLTILLDLDPALGLARAASRGQPDRLERADLTFHRRV 166
Query: 180 AENYEKLKDNI---WIDIDADKDIDTL 203
+ L ++ +DA +D D+L
Sbjct: 167 RHGFLDLAAQAPERFLVLDAARDPDSL 193
>gi|15920677|ref|NP_376346.1| thymidylate kinase [Sulfolobus tokodaii str. 7]
gi|23821799|sp|Q975E6.1|KTHY1_SULTO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|342306202|dbj|BAK54291.1| probable thymidylate kinase [Sulfolobus tokodaii str. 7]
Length = 190
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 78/185 (42%), Gaps = 49/185 (26%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+PR FI FEG D +GKTT AKK+ + L K P + R+ E
Sbjct: 1 MPR--FISFEGIDGAGKTTLAKKVYEVLKKKGYNVILTQEP------------FTREITE 46
Query: 65 LPDQAA-------HLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
L +A LLFSA+ R + ++EQ + +M DRY
Sbjct: 47 LIKKAGWNDPVLLTLLFSAD---RAFHIKWIMEQKPEIVLM----------------DRY 87
Query: 118 SFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLF--KLNEEALQRRKGFGDERYEQTDF 175
S +A+ + G+D W + PKPD V L K+NE + RK +Q +F
Sbjct: 88 FHSTIAYQSVL-GLDEKWIEEVNSKFPKPDIVFLLDIKVNEAIKRIRKD------DQFNF 140
Query: 176 QRKVA 180
+ K+A
Sbjct: 141 EEKIA 145
>gi|298674964|ref|YP_003726714.1| thymidylate kinase [Methanohalobium evestigatum Z-7303]
gi|298287952|gb|ADI73918.1| thymidylate kinase [Methanohalobium evestigatum Z-7303]
Length = 199
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 110/221 (49%), Gaps = 35/221 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G I EG D SGK+T ++L+++ + +N+ F P + G +++ +R
Sbjct: 2 KGKLITLEGIDGSGKSTITERLMNHPSLSNV--VFTREPTKN-WIGKAVEQAIRSDT--- 55
Query: 67 DQAAH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY-----SFS 120
DQ A LF+++ E ++K I + ++EN KN+ +DRY ++
Sbjct: 56 DQIAEFFLFTSDHAEH---ISKTI---------YPAIENGKNV----ISDRYLDSRCAYQ 99
Query: 121 GVAFSAAKEGMDISWCFQPEKGLP-KPDAVLLFKLNEE-ALQRRKGFGDE-RYEQTDFQR 177
GV S E I W + G PD + ++ E A++R G++ ++E+ +F +
Sbjct: 100 GVTLSEKFED-PIKWVQKIHDGWTIIPDLTIFLDIDPEFAIERCGNRGEQTKFEKMEFLQ 158
Query: 178 KVAENYEKL-KDNI--WIDIDADKDIDTLGLIVKDIVIDTI 215
+V +NY++L KDN ++ +D+ + I+ + V DI+ I
Sbjct: 159 QVYDNYQRLMKDNPERFVVVDSSQPIEEVEKDVVDIITSYI 199
>gi|384218895|ref|YP_005610061.1| thymidylate kinase [Bradyrhizobium japonicum USDA 6]
gi|354957794|dbj|BAL10473.1| thymidylate kinase [Bradyrhizobium japonicum USDA 6]
Length = 228
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 99/222 (44%), Gaps = 40/222 (18%)
Query: 2 ASQIP--RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST---GHIID 56
A+Q P RG FI FEG + +GK+TQ KKL D LN + + P + H++
Sbjct: 5 AAQRPSGRGRFITFEGGEGTGKSTQIKKLADRLNAARMRTLVTREPGGSPGAEIMRHLVL 64
Query: 57 EYLRKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC--TN 114
+ K L +A LLF+A R + H + L++G
Sbjct: 65 SGMGKL--LGPEAETLLFAAARDD------------------HVRTVIQPALNRGAWVLC 104
Query: 115 DRYSFSGVAF--SAAKEGMDISWCFQPEK-GLPKPDAVLLFKLNEE-ALQR---RKGFGD 167
DR++ S A+ S + M + Q G KPD L+ L E LQR R+G G
Sbjct: 105 DRFADSTRAYQGSLGRVPMGLINAMQRVTIGDLKPDLTLILDLPVEIGLQRAAVRRGSGT 164
Query: 168 -ERY--EQTDFQRKVAENYEKLKDN---IWIDIDADKDIDTL 203
+R+ E+ F + + E Y K+ ++ + IDA+ D DT+
Sbjct: 165 PDRFEGEKLSFHQGLREAYRKIAEDDPGRCVLIDANSDPDTV 206
>gi|167038531|ref|YP_001666109.1| dTMP kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167038727|ref|YP_001661712.1| dTMP kinase [Thermoanaerobacter sp. X514]
gi|256751401|ref|ZP_05492280.1| thymidylate kinase [Thermoanaerobacter ethanolicus CCSD1]
gi|300913688|ref|ZP_07131005.1| thymidylate kinase [Thermoanaerobacter sp. X561]
gi|307723297|ref|YP_003903048.1| thymidylate kinase [Thermoanaerobacter sp. X513]
gi|320116927|ref|YP_004187086.1| thymidylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|238687559|sp|B0K119.1|KTHY_THEPX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|238687643|sp|B0K7K7.1|KTHY_THEP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|166852967|gb|ABY91376.1| dTMP kinase [Thermoanaerobacter sp. X514]
gi|166857365|gb|ABY95773.1| dTMP kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256749783|gb|EEU62808.1| thymidylate kinase [Thermoanaerobacter ethanolicus CCSD1]
gi|300890373|gb|EFK85518.1| thymidylate kinase [Thermoanaerobacter sp. X561]
gi|307580358|gb|ADN53757.1| thymidylate kinase [Thermoanaerobacter sp. X513]
gi|319930018|gb|ADV80703.1| thymidylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 203
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FI FEG D GKTTQ K L +YL K + P T + D L K +
Sbjct: 2 KGKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLDKNNFIS 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
LL++++R +L+E+ +I+ + E + L + Y + G A
Sbjct: 62 PVTEMLLYASSR-------AQLVEE----KILPAIEEGKIVLLDRFVDSSYVYQGYARGL 110
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQT--DFQRKVAENY 183
E + + L PD + + EEA++RR +R E+ DF +KV E Y
Sbjct: 111 GIEKVKVVNEIATMGIL--PDVTIYIDITPEEAMKRRGKREADRLERESWDFHKKVREGY 168
Query: 184 EKL-----KDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
KL K ++ID + L + KDI ID +KK
Sbjct: 169 IKLVKEFPKRFVFID-----GMQELMKVHKDI-IDVVKK 201
>gi|113475256|ref|YP_721317.1| thymidylate kinase [Trichodesmium erythraeum IMS101]
gi|123352459|sp|Q115I0.1|KTHY_TRIEI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|110166304|gb|ABG50844.1| thymidylate kinase [Trichodesmium erythraeum IMS101]
Length = 225
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 43/216 (19%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQF----VNFPDRTIST----GHIIDEYL 59
G FIVFEG + GKTTQ + L D+L + Q ++ + T G + + L
Sbjct: 3 GKFIVFEGVEGGGKTTQIELLQDWLLETGESRQILPKSIDLDLEVVITREPGGTKLGKAL 62
Query: 60 RKKIELPDQAAH--------LLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQ 110
R+ + PD A LL++A+R + L K +E+G +
Sbjct: 63 RELLLSPDVLAEKIQETSELLLYAADRAQHIEALIKPCLERGTIV--------------- 107
Query: 111 GCTNDRYSFSGVAFSAAKEGMDISWCFQ---PEKGLPKPDAVLLFKLNEE-ALQRRKGFG 166
DR+ S +A+ G+D+ Q G K D ++ E L R K G
Sbjct: 108 --LCDRFIDSTIAYQGYGRGLDVELIKQLNYIATGGLKSDLTFWLDIDVEIGLARAKSRG 165
Query: 167 D-ERYEQT--DFQRKVAENYEKLKDN--IWIDIDAD 197
+ +R EQ +F R+V + Y++L N + + IDA+
Sbjct: 166 NFDRMEQANIEFHRRVQQGYQELAKNNSLIVRIDAN 201
>gi|318040596|ref|ZP_07972552.1| thymidylate kinase [Synechococcus sp. CB0101]
Length = 219
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 36/230 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG F+V EG D GKTTQ + L +L ++ + + G + LR+ + P
Sbjct: 4 RGRFLVLEGIDGCGKTTQIEHLRHWLPRSGLMPEGAQLMVTREPGGTELGRALRQLLLHP 63
Query: 67 DQAAH-------LLFSANRWEREPTLTKLIEQGI--TLEIMHSSLENEKNLDQGCTNDRY 117
AA LL++A+R + ++Q I LE H L +DR+
Sbjct: 64 PGAAAPCSTAELLLYAADRAQH-------VQQQILPALEAGHWVL-----------SDRF 105
Query: 118 SFSGVAFSAAKEGMDISWCFQPE----KGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQ 172
S S A+ G+ ++ Q +GL +PD LL + EE+L+RR +R E
Sbjct: 106 SGSTAAYQGYGRGLSLALIDQLSLIACRGL-QPDLTLLLDVPLEESLRRRGHRAADRIEA 164
Query: 173 TD--FQRKVAENYEKLKDNI-WIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
+ F +V + L W +D + + + ++ + K ++
Sbjct: 165 SGEAFLARVCAGFVALAAQPGWQRLDGSQPPEAVSAALEAAITHRCKLAE 214
>gi|346994654|ref|ZP_08862726.1| thymidylate kinase [Ruegeria sp. TW15]
Length = 208
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 25/220 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG F+ FEG D SGK+TQA+ L D+L + P + I + L+ P
Sbjct: 4 RGTFLTFEGIDGSGKSTQARLLADHLRREGRDVILTREPGGSAGAEEIRNLVLQGD---P 60
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
D RW E + L+ + + ++E + DR++ S +
Sbjct: 61 D----------RWSAETEI--LLFTAARRDHLERTIEPALAAGKVVICDRFADSTRMYQG 108
Query: 127 AKEGMDISWCFQPEKGL--PKPDAVLLFKLN-EEALQRRKG--FGDERYEQ--TDFQRKV 179
G S Q + +PD LL ++ E L R KG +ER+E D Q ++
Sbjct: 109 MSRGDLRSLVDQLHNLMIGREPDLTLLIDMDPETGLSRAKGRQGAEERFEDFGVDLQLQM 168
Query: 180 AENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIK 216
+ L D + ++ ++D+D++ V DIV+ +++
Sbjct: 169 RAGFLALADEFQDRFRVVNGNRDMDSVAQDVTDIVMTSLR 208
>gi|294944735|ref|XP_002784404.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983]
gi|239897438|gb|EER16200.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983]
Length = 96
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 115 DRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEA 158
DRY FS VA++A K +D WC + GLP+PD V+ ++ EA
Sbjct: 17 DRYIFSVVAYTAMKVTVDFEWCKSVDVGLPRPDMVMFLDISPEA 60
>gi|418020960|ref|ZP_12660139.1| thymidylate kinase [Candidatus Regiella insecticola R5.15]
gi|347603677|gb|EGY28463.1| thymidylate kinase [Candidatus Regiella insecticola R5.15]
Length = 221
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 79/196 (40%), Gaps = 26/196 (13%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M S++ G FIV EG + +GKTT + + L + I + E ++
Sbjct: 1 MHSKMITGKFIVIEGLEGAGKTTARETVAQILRAHGISDIVQPREPGGTPVAEKLRELIK 60
Query: 61 KKIE---LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
++I+ L D+A L+ A R +LIE I + + DR+
Sbjct: 61 QRIDSDPLTDKAEILMLYAAR-------VQLIENVIKPALARGAW---------VVGDRH 104
Query: 118 SFSGVAFSAAKEGMDISWCFQPEKGLP---KPDAVLLFKLN-EEALQRRKGFGD-ERYEQ 172
S A+ GMD W L +PD L ++ E+ L+R + G +R EQ
Sbjct: 105 DLSSQAYQGGGRGMDSKWMASLRDSLLGSFRPDLTLYLDISPEQGLERVRSRGSFDRIEQ 164
Query: 173 TD--FQRKVAENYEKL 186
F +V E Y KL
Sbjct: 165 ESLAFFTRVHERYLKL 180
>gi|237748461|ref|ZP_04578941.1| thymidylate kinase [Oxalobacter formigenes OXCC13]
gi|229379823|gb|EEO29914.1| thymidylate kinase [Oxalobacter formigenes OXCC13]
Length = 207
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 21/158 (13%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FI FEG D +GK+T + + D L +N P T+ + + L K+ L
Sbjct: 8 GRFITFEGIDGAGKSTHIQFVTDLLRADNRQVVVTREPGGTVLGEKLREMLLHDKMNLET 67
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+A L+F+A R + +++G +DR++ + A+
Sbjct: 68 EAL-LMFAARREHIAEVIEPALQRG-----------------DWVISDRFTDASFAYQGG 109
Query: 128 KEGMDISWCFQPEKGLP---KPDAVLLFKLNEEALQRR 162
G+D+ Q E+ + +PD LLF ++ E Q R
Sbjct: 110 GRGLDLHKMRQLEEWVHPHLQPDLTLLFDVSPEVAQAR 147
>gi|449110928|ref|ZP_21747527.1| thymidylate kinase [Treponema denticola ATCC 33521]
gi|449114256|ref|ZP_21750736.1| thymidylate kinase [Treponema denticola ATCC 35404]
gi|449116837|ref|ZP_21753283.1| thymidylate kinase [Treponema denticola H-22]
gi|448953092|gb|EMB33888.1| thymidylate kinase [Treponema denticola H-22]
gi|448957253|gb|EMB38005.1| thymidylate kinase [Treponema denticola ATCC 35404]
gi|448959191|gb|EMB39912.1| thymidylate kinase [Treponema denticola ATCC 33521]
Length = 213
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 22/184 (11%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS--TGHIIDEYLRKKIELPD 67
F+VFEG D SG T+Q + L + + S V+F S G +I L+ +L
Sbjct: 10 FVVFEGIDGSGTTSQIRLLKERFESED-KSSLVSFTQEPTSGPIGTLIRSALQGSFKLAP 68
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ LF+A+R E L QGI ++ N + +DRY FS +A+ A
Sbjct: 69 ETMTRLFAADRCEHIYGL-----QGILKQV---------NDGRAVFSDRYVFSSLAYQTA 114
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD--ERYEQTDFQRKVAENYE 184
D++ G P P+ + F L + ++ R G + E YE+ FQ KV + Y+
Sbjct: 115 AGAADLAKL--QNDGFPLPEFLFFFDLPVDISMNRVMGRSNVLEIYEEKTFQYKVQDEYK 172
Query: 185 KLKD 188
K+ D
Sbjct: 173 KIID 176
>gi|315452626|ref|YP_004072896.1| thymidylate kinase [Helicobacter felis ATCC 49179]
gi|315131678|emb|CBY82306.1| thymidylate kinase [Helicobacter felis ATCC 49179]
Length = 190
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 87/219 (39%), Gaps = 49/219 (22%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST---GHIIDEYLRKKI--- 63
+IVFEG D SGK+TQ L FP S G + E+LR+
Sbjct: 2 WIVFEGVDTSGKSTQINLLKPL------------FPKAIFSLEPGGTALGEHLRQAALHG 49
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
Q LLF A+R +H + N + +DR SG+A
Sbjct: 50 AFCAQTQFLLFLADR------------------ALHLEEVIKPNAHKLIFSDRSLVSGLA 91
Query: 124 FSAAKEGMDISWCFQPEKGL-PKPDAVLLFKLNEEALQRR---KGFGDERYEQTDFQRKV 179
+S+ G++ +W GL PD VLLFKLN L+ R K DF +V
Sbjct: 92 YSS--YGLEHAWELHRAHGLDVLPDMVLLFKLNAHTLEMRLQAKNPDGIESRGVDFLMRV 149
Query: 180 AENYEKLKDNIWI---DIDADKDIDTLGLIVKDIVIDTI 215
E E+ + + I+A K ++ V IV++ I
Sbjct: 150 QERLEQACALLGVRTESINASKSVEE----VHKIVLEKI 184
>gi|326772517|ref|ZP_08231801.1| dTMP kinase [Actinomyces viscosus C505]
gi|326637149|gb|EGE38051.1| dTMP kinase [Actinomyces viscosus C505]
Length = 269
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 39/226 (17%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FI FEG D GKTTQ + L D L ++ P T G I L +
Sbjct: 28 GLFISFEGGDGVGKTTQIRILADLLTAADVDHVLTREPGGT-ELGVEIRRLLLHGGHVAP 86
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRYSFSGVAFS 125
+A LL++A+R H + L++G DRY S VA+
Sbjct: 87 RAEALLYAADRAH------------------HIATRVRPALERGAVVLADRYLDSSVAYQ 128
Query: 126 AAKEGM------DIS-WCFQPEKGLPKPDAVLLFKLNEEALQRR---KGFGDERYEQTD- 174
A + D+S W + GL PD +L + + +RR +G D ++ D
Sbjct: 129 GAARSLGPQEVRDLSLWATE---GL-LPDLTVLLDGDPDLAERRTTGRGAKDRLEQEGDA 184
Query: 175 FQRKVAENYEKLKDN---IWIDIDADKDIDTLGLIVKDIVIDTIKK 217
F+ + E + L + ++ +DAD+ +D + V + V+ +++
Sbjct: 185 FRVALREQFLTLAEGEPERFVVVDADRPVDQVADDVIEAVVAAVRR 230
>gi|294508726|ref|YP_003572785.1| thymidylate kinase [Salinibacter ruber M8]
gi|294345054|emb|CBH25832.1| Thymidylate kinase [Salinibacter ruber M8]
Length = 221
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 86/210 (40%), Gaps = 35/210 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
+ FEG D SGK+TQA +L ++L + + V P T + + L + + A
Sbjct: 3 LLTFEGIDGSGKSTQAHRLNEHLQERGHETLLVREPGGTELSEQVRSVLLEPTLNVHPMA 62
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSAA 127
LLFSA R T+L+ + I L+ G DR+ S A+ A
Sbjct: 63 ELLLFSAAR-------TQLVTERI-----------RPALEAGRIVICDRFYDSTTAYQGA 104
Query: 128 KEGM-DISWCFQPEK----GLPKPDAVLLFKLNEEALQRRKGFGD----ERYEQTD--FQ 176
+ D W + GL PD L +L+ E + R+ GD +R E D F
Sbjct: 105 GRNVADPEWLQSFHRRVTDGL-VPDRTYLVELDPETARARRTEGDDAAGDRMEAEDEAFY 163
Query: 177 RKVAENYEKLKDNIWIDI---DADKDIDTL 203
+VA Y+ L D I D + I+ L
Sbjct: 164 HRVAAAYDTLADEHSARIHRLDGHRSIEAL 193
>gi|406927987|gb|EKD63902.1| hypothetical protein ACD_51C00155G0012 [uncultured bacterium]
Length = 194
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS-TGHIIDEYLRK--KIELP 66
FI G + GKTT AK+LV L + ++ +P + TG +++ +R +
Sbjct: 2 FITLYGVNNIGKTTHAKRLVAKLQAMGKKAVYIKYPIYDLEPTGPYLNKIIRSGNPQSIS 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ + F+ NR++ EP L K +E G + + Y +G+A+
Sbjct: 62 EHELQMWFTINRYQFEPQLKKWLEDGTIV-----------------VAEDYIGTGIAWGT 104
Query: 127 AKEGMDISWC 136
AK G+D SW
Sbjct: 105 AK-GVDTSWL 113
>gi|148240580|ref|YP_001225967.1| thymidylate kinase [Synechococcus sp. WH 7803]
gi|166223122|sp|A5GP05.1|KTHY_SYNPW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|147849119|emb|CAK24670.1| Thymidylate kinase [Synechococcus sp. WH 7803]
Length = 213
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 32/205 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KIEL 65
+G F+V EG D GKTTQ ++L ++L + + + G + LR+ +
Sbjct: 2 KGRFLVLEGIDGCGKTTQLRQLAEWLPDSGLMPEGATLHLTREPGGTPLGRALRELLLHP 61
Query: 66 PDQAAH------LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
PD+AA L+++A+R Q + I+ + + L +DR+S
Sbjct: 62 PDEAAPCPEAELLMYAADR-----------AQHVQRRILPALACGDWVL-----SDRFSG 105
Query: 120 SGVAFSAAKEGMDISWCFQPEK----GLPKPDAVLLFKLNEEA-LQRRKGFGDERYEQTD 174
S +A+ G+D + E+ GL PD L L+ EA + RR+ ++R E
Sbjct: 106 STLAYQGDGRGLDRALILDLERIATAGL-VPDVTLWLDLSLEASMARREERTEDRIEAEG 164
Query: 175 --FQRKVAENYEKL-KDNIWIDIDA 196
F +VA+ + +L + W+ I A
Sbjct: 165 QAFLARVADGFRQLAAERGWVGIPA 189
>gi|42528099|ref|NP_973197.1| thymidylate kinase [Treponema denticola ATCC 35405]
gi|41819144|gb|AAS13116.1| thymidylate kinase [Treponema denticola ATCC 35405]
Length = 209
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 22/184 (11%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS--TGHIIDEYLRKKIELPD 67
F+VFEG D SG T+Q + L + + S V+F S G +I L+ +L
Sbjct: 6 FVVFEGIDGSGTTSQIRLLKERFESED-KSSLVSFTQEPTSGPIGTLIRSALQGSFKLAP 64
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ LF+A+R E L QGI ++ N + +DRY FS +A+ A
Sbjct: 65 ETMTRLFAADRCEHIYGL-----QGILKQV---------NDGRAVFSDRYVFSSLAYQTA 110
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD--ERYEQTDFQRKVAENYE 184
D++ G P P+ + F L + ++ R G + E YE+ FQ KV + Y+
Sbjct: 111 AGAADLAKL--QNDGFPLPEFLFFFDLPVDISMNRVMGRSNVLEIYEEKTFQYKVQDEYK 168
Query: 185 KLKD 188
K+ D
Sbjct: 169 KIID 172
>gi|168185104|ref|ZP_02619768.1| putative thymidylate kinase [Clostridium botulinum Bf]
gi|237793368|ref|YP_002860920.1| putative thymidylate kinase [Clostridium botulinum Ba4 str. 657]
gi|182671852|gb|EDT83813.1| putative thymidylate kinase [Clostridium botulinum Bf]
gi|229263044|gb|ACQ54077.1| putative thymidylate kinase [Clostridium botulinum Ba4 str. 657]
Length = 231
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 71/171 (41%), Gaps = 44/171 (25%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ RG IV EG D SGK TQAKKL D L + N + V FP+ + +I YL +
Sbjct: 1 MERGRLIVIEGSDGSGKATQAKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60
Query: 64 ELPDQ----AAHLLFSANR-------WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC 112
+ PD A+ ++ +R WE ++ GI +
Sbjct: 61 KDPDSVNPYASSTFYAVDRFASYKKDWEEF-----YLKGGIIIA---------------- 99
Query: 113 TNDRYSFSGVAFSAAK--------EGMDISWCFQPEK-GLPKPDAVLLFKL 154
DRY+ S + AAK ++ W F+ +K LP PD V+ +
Sbjct: 100 --DRYTTSNMIHQAAKIKDVQAKDNFLNWLWDFEFKKFNLPVPDCVIFLDM 148
>gi|334130085|ref|ZP_08503888.1| Thymidylate kinase [Methyloversatilis universalis FAM5]
gi|333445121|gb|EGK73064.1| Thymidylate kinase [Methyloversatilis universalis FAM5]
Length = 205
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 78/188 (41%), Gaps = 38/188 (20%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI FEG D +GK+TQ + D+L P T G + L + PD
Sbjct: 6 FITFEGMDGAGKSTQIARTADWLRARGHAVLLTREPGGT-PLGESLRGLLLHEAMHPDTE 64
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSAA 127
A L+F+A R L ++I E L +G DR++ + A+
Sbjct: 65 ALLMFAARR----EHLAQVI---------------EPALGRGDWVLCDRFTDASFAYQGG 105
Query: 128 KEGMDI-------SWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGD--ERY--EQTDF 175
G+DI +W ++GL +P LLF L E A QR G +R+ EQ+DF
Sbjct: 106 GRGLDIARLQALEAWV---QRGL-QPGLTLLFDLPCEVAAQRLAASGGDPDRFEREQSDF 161
Query: 176 QRKVAENY 183
+V Y
Sbjct: 162 FNRVRAAY 169
>gi|227824456|ref|ZP_03989288.1| thymidylate kinase [Acidaminococcus sp. D21]
gi|352684412|ref|YP_004896397.1| thymidylate kinase [Acidaminococcus intestini RyC-MR95]
gi|226904955|gb|EEH90873.1| thymidylate kinase [Acidaminococcus sp. D21]
gi|350279067|gb|AEQ22257.1| thymidylate kinase [Acidaminococcus intestini RyC-MR95]
Length = 205
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 84/215 (39%), Gaps = 30/215 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FI EG D SGKTTQAK+L YL P T + L +I +
Sbjct: 3 KGLFITLEGPDGSGKTTQAKRLKAYLETKGREVVLTREPGGTGLAETLRSLALSPEITMS 62
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ LL A R + +++ +LE K + DR+S S + +
Sbjct: 63 KRVESLLHVAARADHVD------------KVIRPALEAGKVV----ICDRFSDSTLIYQG 106
Query: 127 AKEGMDI----SWCFQPEKGLPKPDAVLLFKLNEEA-LQRRKGFG-DERYEQTD--FQRK 178
GMD+ KGL PD L N L RR+ G +++E FQ K
Sbjct: 107 ILGGMDLDELERLSLFGSKGL-SPDVTFLIDGNPRVLLSRREARGVTDKFEAQGLLFQEK 165
Query: 179 VAENYEKLKDN-----IWIDIDADKDIDTLGLIVK 208
+ + Y L D I ID + D T LI K
Sbjct: 166 IRQGYLTLLDRYPERMILIDGEGTPDSVTDALIKK 200
>gi|255513737|gb|EET90002.1| dTMP kinase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 215
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 64/158 (40%), Gaps = 24/158 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
I FEG D SGK+TQA+ L YL + I + P G +I E + K + A
Sbjct: 2 LIAFEGIDGSGKSTQAEMLDSYLKSSGIAAVTTAEPTSG-PIGKLIKEIVVSKKPINALA 60
Query: 70 AHLLFSANR-WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
+LF+A+R + E T+ I +G + DRY S +A+ A
Sbjct: 61 MQMLFTADRAYHLETTIMPSISEG-----------------KVIITDRYIGSTIAYGTA- 102
Query: 129 EGMDISWCFQPEKGLPKPDAVLLFKLNE----EALQRR 162
G+D + + PD + N E L RR
Sbjct: 103 AGIDKRFLVGINRKFIPPDITFVIDANPRKAVERLNRR 140
>gi|297543636|ref|YP_003675938.1| thymidylate kinase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296841411|gb|ADH59927.1| thymidylate kinase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 204
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FI FEG D GKTTQ K L +YL K + P T + D L K +
Sbjct: 2 KGKFISFEGIDGCGKTTQIKFLKEYLLKKGYNILVLREPGGTNVGEKVRDILLDKYNFIS 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
LL++++R +L+E+ +I+ + E + L + Y + G A
Sbjct: 62 PVTEMLLYASSR-------AQLVEE----KILPAIKEGKIVLLDRFVDSSYVYQGYARGL 110
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQT--DFQRKVAENY 183
E + I L PD + + EEA++RR +R E+ DF +KV E Y
Sbjct: 111 GIEKVKIVNEIATMGIL--PDVTIYIDITPEEAMKRRGKREADRLERESWDFHKKVREGY 168
Query: 184 EKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKK 217
KL ++ ID ++I + V +ID +KK
Sbjct: 169 IKLVKEYPKRFVFIDGMQEI----VKVHQDIIDAVKK 201
>gi|163814924|ref|ZP_02206312.1| hypothetical protein COPEUT_01075 [Coprococcus eutactus ATCC 27759]
gi|158449863|gb|EDP26858.1| dTMP kinase [Coprococcus eutactus ATCC 27759]
Length = 207
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 40/220 (18%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
RG FI EG D +GKTTQ + L +YL K P G+ I E +R+ I
Sbjct: 2 RGIFITIEGPDGAGKTTQRELLKEYLEKKGYDVLITRDPG-----GNPISEAIREVILNK 56
Query: 64 ---ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
E+ LL+++ R +L+++ I +LE Q DR+ S
Sbjct: 57 EFTEMGYMTELLLYASAR-------AQLVKENI-----KPALEA----GQAVIADRFVDS 100
Query: 121 GVAFSAAKEGMDISWCFQPE----KGLPKPDAVLLFKLN-EEALQRRKGFGD-ERY--EQ 172
+ G+ + ++ +G+ PD L LN +E + R+K + +R E+
Sbjct: 101 SAVYQGIGRGLGVDTVYKINEFALQGI-MPDMTFLMDLNAQEGIARKKNQAELDRMENEK 159
Query: 173 TDFQRKVAENYEKLKD---NIWIDIDADKDIDTL-GLIVK 208
+F +KV + Y L D + IDA I+ + G+I K
Sbjct: 160 IEFHQKVVDGYRMLADMHPERIVKIDATLPINEIHGIITK 199
>gi|306821414|ref|ZP_07455019.1| thymidylate kinase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|402310089|ref|ZP_10829058.1| putative dTMP kinase [Eubacterium sp. AS15]
gi|304550536|gb|EFM38522.1| thymidylate kinase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|400370152|gb|EJP23148.1| putative dTMP kinase [Eubacterium sp. AS15]
Length = 217
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 31/208 (14%)
Query: 8 GAFIVFE-GCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
G F V E G D GK TQ+ L +L K+N + V FP+ +T ++ YL
Sbjct: 2 GKFYVIESGSDACGKATQSNLLYTHLKKDNKVLK-VEFPNYKSATSSLVKMYLNGD---- 56
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
F N + P +T + +E N D DRY+ S + + A
Sbjct: 57 -------FGKNPEDVNPYITSTFFAADRYATFKTEIEKYYNDDYIIIADRYTTSNMVYQA 109
Query: 127 AK-EGMD-----ISWCFQPEKG---LPKPDAVLL----FKLNEEALQRR---KGFGDERY 170
K + +D + W + E LPKPD V F+++ + ++ R KG + +
Sbjct: 110 GKYDDIDEKNKFLDWLYDFEFNLYELPKPDKVFFLDLPFEISYKLMKNRSVKKGVDVDIH 169
Query: 171 EQT-DFQRKVAENYEKLKDNI-WIDIDA 196
E + D+ KV EN + + + W ID
Sbjct: 170 ENSRDYLEKVYENAKFVAEKYGWCHIDC 197
>gi|338730636|ref|YP_004660028.1| thymidylate kinase [Thermotoga thermarum DSM 5069]
gi|335364987|gb|AEH50932.1| thymidylate kinase [Thermotoga thermarum DSM 5069]
Length = 201
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 83/203 (40%), Gaps = 27/203 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDE-YLRKKIELPDQ 68
FI FEG D SGK TQ K +YL K I V P T G +I L +++ +
Sbjct: 2 FISFEGIDGSGKGTQIKLFAEYLQKKGIDFVIVREPGGT-EVGELIRSLLLNSDLKIYPR 60
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
LLF A+R + I E++ +L K +DR+ S VA+
Sbjct: 61 TELLLFLASRAQ------------IVDEVILPALRAGKT----VISDRFIDSSVAYQGVG 104
Query: 129 EGMDISWCFQPEKGLP---KPDAVLLFKLNEEALQRRKGFGDERYEQ--TDFQRKVAENY 183
G+ + + KPD + E +RK D R E+ +F KV E Y
Sbjct: 105 RGIGFELVEELNRFATSDVKPDLTFYLDITPETSLKRKMIKD-RMEKNGIEFLNKVREAY 163
Query: 184 EKLKD---NIWIDIDADKDIDTL 203
+ N + I+ +++ID +
Sbjct: 164 LMIAQKEPNRVVVINGERNIDEI 186
>gi|218960693|ref|YP_001740468.1| thymidylate kinase [Candidatus Cloacamonas acidaminovorans]
gi|167729350|emb|CAO80261.1| thymidylate kinase [Candidatus Cloacamonas acidaminovorans str.
Evry]
Length = 217
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 76/184 (41%), Gaps = 23/184 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK-IEL 65
+G FI FEG + SGKTTQ LV+ L IP P T + I D L K +E+
Sbjct: 13 KGLFITFEGIEGSGKTTQIIMLVEVLKAKGIPYVTTREPGGTKISEAIRDLLLNPKFMEM 72
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
+ LL+ A+R + T E++ +LE K + +DRY S A+
Sbjct: 73 KPETELLLYCASRAQH------------TAELILPALEEGKIV----ISDRYFDSTYAYQ 116
Query: 126 AAKEGMD---ISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQ--TDFQRKV 179
A +D I+ + PD L L E L R K +R EQ F KV
Sbjct: 117 GAARELDEEVINVLTRFSTYGRNPDLTFLLDLPVEVGLARIKNRNLDRLEQETLSFHEKV 176
Query: 180 AENY 183
+
Sbjct: 177 RRQF 180
>gi|90406894|ref|ZP_01215085.1| thymidylate kinase [Psychromonas sp. CNPT3]
gi|90311936|gb|EAS40030.1| thymidylate kinase [Psychromonas sp. CNPT3]
Length = 218
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 34/205 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE----- 64
FIV EG + +GKTT + + ++L + +P+ + + G + EY+R I+
Sbjct: 11 FIVIEGLEGAGKTTAIRYIGNWLAEQGVPTSKMTYTRE--PGGTKLGEYMRDIIKMDLND 68
Query: 65 --LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
L D+A LL A+R +L+E I + + DR+++S +
Sbjct: 69 ESLDDKAELLLMYASR-------VQLVEAVIKPALAQGHI---------VIGDRHNYSSL 112
Query: 123 AFSAAKEGMDISWCF---QPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYEQ--TDF 175
A+ G+D+ + Q G K D L ++ LQR +G G+ +R E+ DF
Sbjct: 113 AYQGGGRGLDMHFIHSLKQLSLGDFKADFTLYLDIDPALGLQRARGRGELDRIERLAIDF 172
Query: 176 QRKVAENYEKL--KDNIWIDIDADK 198
+ + + L D + IDA K
Sbjct: 173 FERTRQVFLNLVADDESAVTIDASK 197
>gi|295094265|emb|CBK83356.1| thymidylate kinase [Coprococcus sp. ART55/1]
Length = 207
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 40/219 (18%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
RG FI EG D +GKTTQ + L +YL K P G+ I E +R+ I
Sbjct: 2 RGIFITIEGPDGAGKTTQRELLKEYLEKKGYDVLITRDPG-----GNPISEAIREVILNK 56
Query: 64 ---ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
E+ LL+++ R +++ +++ + Q DR+ S
Sbjct: 57 DFTEMGYMTELLLYASARA----------------QLVKENIKPALDAGQAVIADRFVDS 100
Query: 121 GVAFSAAKEGMDISWCFQPE----KGLPKPDAVLLFKLN-EEALQRRKGFGD-ERY--EQ 172
+ G+ + ++ +G+ PD L L+ +E + R+K + +R E+
Sbjct: 101 SAVYQGIGRGLGVDTVYKVNEFALQGI-MPDMTFLMDLDAQEGISRKKNQAELDRMENEK 159
Query: 173 TDFQRKVAENYEKLKD---NIWIDIDADKDIDTL-GLIV 207
+F +KV + Y L D + IDA ID + G+IV
Sbjct: 160 MEFHQKVVDGYRMLADMHTERIVKIDATLPIDEIHGIIV 198
>gi|21674136|ref|NP_662201.1| thymidylate kinase [Chlorobium tepidum TLS]
gi|25453084|sp|Q8KCU7.1|KTHY_CHLTE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|21647295|gb|AAM72543.1| thymidylate kinase [Chlorobium tepidum TLS]
Length = 214
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 35/206 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
I FEG D +GK+TQ KL YL + + P T I + L ++ ++
Sbjct: 2 LISFEGIDGAGKSTQVMKLKRYLQERGREVLALREPGGTPVAEEIRELLLERRNDITPVG 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF+A+R E L++Q ++ +LEN D DR+ S A+
Sbjct: 62 ELLLFAASRAE-------LVQQ-----VIQPALEN----DSDVILDRFFDSTTAYQGYGR 105
Query: 130 GMDISWCFQPEKGLP---KPDAVLLFKLN-EEALQRR-------KGFGDERYEQT----- 173
G+D+ + + PD L E+AL R+ F E ++
Sbjct: 106 GLDLDMLAEINRIASCRLVPDVTFYLDLTPEDALMRKFSEKSLPLAFESEELDRMENSGL 165
Query: 174 DFQRKVAENYEKL---KDNIWIDIDA 196
DF R+V E Y K+ N I IDA
Sbjct: 166 DFYRRVREGYHKIGGENPNRIIIIDA 191
>gi|429216949|ref|YP_007174939.1| thymidylate kinase [Caldisphaera lagunensis DSM 15908]
gi|429133478|gb|AFZ70490.1| thymidylate kinase [Caldisphaera lagunensis DSM 15908]
Length = 219
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDE-YLRKKI 63
+ +G I FEG D SG TT +K L + LNK S + P G +I + L K
Sbjct: 4 LEKGLLIAFEGIDGSGLTTHSKLLNEKLNKLGYKSIYTKEPTNN-EIGILIQKIILDKNK 62
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTN-----DRYS 118
+L + LLF+A+R +M+ NE L N DRY
Sbjct: 63 KLDNNIIALLFAADRL---------------YHLMYGDGANEGILSYISKNYIVISDRYK 107
Query: 119 FSGVAFSAAKEGMDISWCFQPEKGLPKPDAVL 150
+S +A+ +G DI+W Q K + D ++
Sbjct: 108 YSNMAY----QGDDINWISQLNKFAIEADIII 135
>gi|400976784|ref|ZP_10804015.1| thymidylate kinase [Salinibacterium sp. PAMC 21357]
Length = 209
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 39/219 (17%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FI EG D GKTTQ++ LV +L + P T + + L ++ E+
Sbjct: 3 GLFITLEGGDGVGKTTQSQLLVQWLEEAGHTVVVTREPGGTDLGLELREIVLHRRGEMDP 62
Query: 68 QAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+A L+++A+R TL K +E+G EI+ DRY S A+
Sbjct: 63 RAEALIYAADRAHHIATLVKPALERG---EIV--------------VQDRYIDSSEAYQG 105
Query: 127 A------KEGMDIS-WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERY-----EQTD 174
A E D+S W Q PD +L L+ ++R RY E+ D
Sbjct: 106 AGRVLGSDEVRDLSLWAAQN----LLPDVTVLLDLDPVDSRKRLDSARTRYDRLEAEKHD 161
Query: 175 FQRKVAENY----EKLKDNIWIDIDADKDIDTLGLIVKD 209
F +V E + + D I + +DA +D D + ++++
Sbjct: 162 FHARVREAFLERAAQEPDRILV-VDAARDRDEIATVIRE 199
>gi|227486758|ref|ZP_03917074.1| possible dTMP kinase [Anaerococcus lactolyticus ATCC 51172]
gi|227235228|gb|EEI85243.1| possible dTMP kinase [Anaerococcus lactolyticus ATCC 51172]
Length = 207
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI---- 63
G FIVFEG D SGKTT KK+ + L + + P G I E +R I
Sbjct: 3 GKFIVFEGPDGSGKTTIIKKVKELLENKDYSISYYREP-----GGTSISEKIRSIIIDND 57
Query: 64 --ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
+ + LLF+++R +L+ + IT ++ + DR+ S
Sbjct: 58 NYMMDAKTEALLFASSR-------AQLVAEKITPDLKEGKI---------VICDRFVMSS 101
Query: 122 VAFSAAKEGM---DISWCFQPEKGLPKPDAVLLFKLN-EEALQR-RKGFGDERYEQTD-- 174
+ + + +I G KPD L F ++ + AL+R R F +R E D
Sbjct: 102 LLYQGLGRALGVDNIKTINDFATGGLKPDLTLFFNIDYKTALERKRANFSPDRLENEDFS 161
Query: 175 FQRKVAENYEKLKDNIWID----IDADKDIDTLGLIVKDIV 211
F + + + Y K+ D ++ D +DA K I+ L V +I+
Sbjct: 162 FHKTIFDGYMKMAD-LYKDEIKKVDARKSIEDLTEDVINII 201
>gi|406967990|gb|EKD92948.1| dTMP kinase [uncultured bacterium]
Length = 191
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 21/146 (14%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS-TGHIIDEYLR--KKIELP 66
I G + GKTT AK+LV+ LN++ + +V +P TI +G ++ LR ++ +
Sbjct: 2 LITLYGINNIGKTTHAKRLVNELNESGRAAVYVKYPVYTIEPSGPYLNTLLRSGRQQAVS 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
++ L F NR + +PTL + + +G + + YS +G+ +
Sbjct: 62 EEELQLWFVLNRHQFQPTLKQWLSEG-----------------KIVVAEDYSGTGIVWGI 104
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLF 152
K G++ W + L D LL
Sbjct: 105 TK-GLEQGWLESLNRFLVPSDLSLLI 129
>gi|302795141|ref|XP_002979334.1| hypothetical protein SELMODRAFT_418976 [Selaginella moellendorffii]
gi|300153102|gb|EFJ19742.1| hypothetical protein SELMODRAFT_418976 [Selaginella moellendorffii]
Length = 459
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 115 DRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAV 149
DRYS+SGVAFSAAK G+D+ WC GLP D V
Sbjct: 263 DRYSYSGVAFSAAK-GLDLEWCKALGVGLPAADLV 296
>gi|374262755|ref|ZP_09621317.1| thymidylate kinase [Legionella drancourtii LLAP12]
gi|363536807|gb|EHL30239.1| thymidylate kinase [Legionella drancourtii LLAP12]
Length = 212
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 82/193 (42%), Gaps = 41/193 (21%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE--- 64
G IV EG + +GK+T ++DYL + I + P G +I E LR+ I+
Sbjct: 6 GKLIVIEGLEGAGKSTAVSTVIDYLTRLEIKTITTREPG-----GTVIGELLRQIIKGTE 60
Query: 65 ----LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYS 118
L D++ LL R +L+EQ I + L QG DR+
Sbjct: 61 YKGVLDDKSELLLLYTAR-------IQLLEQVI-----------KPALQQGTWVIADRFE 102
Query: 119 FSGVAFSAAKEGMDISWCFQPEK----GLPKPDAVLLFKLN-EEALQRRKGFGD-ERYEQ 172
S +A+ G++ Q G KPD L ++ EE ++R K G+ +R EQ
Sbjct: 103 LSTMAYQGGGRGLNEQMIQQLSAFALDGF-KPDLTLYLDISPEEGMKRVKSRGEFDRIEQ 161
Query: 173 --TDFQRKVAENY 183
DF +V +Y
Sbjct: 162 QSIDFFHRVHSSY 174
>gi|297717894|gb|ADI50090.1| thymidylate kinase [Candidatus Odyssella thessalonicensis L13]
Length = 205
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 30/209 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FI FEG + +GK+TQ + L DYL + P T E +R + D
Sbjct: 4 GKFITFEGGEGTGKSTQCQLLADYLRQQGYEVILTREPGGTDGA-----ELIRALLVSGD 58
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
NRW L+ ++ + N DR++ S +A+
Sbjct: 59 --------VNRW--SGVTEALLLNAARVDHWEKVISPALNRGAWVICDRFADSTIAYQGF 108
Query: 128 KEGMDISWCFQPEKG-LP--KPDAVLLFKLN-----EEALQRRKGFGDERYEQTD--FQR 177
G+DI + + LP +PD +F L+ AL RR + R+E+ D F
Sbjct: 109 GRGLDIDFLWNLHNSVLPGVQPDLTFVFDLDPAIGINRALSRRT--SEVRFEKMDIEFHN 166
Query: 178 KVAENYEKLKDNI---WIDIDADKDIDTL 203
++ Y ++ N +DA +DI+T+
Sbjct: 167 RMRHGYLEIAKNHPQRCRLVDAGQDINTI 195
>gi|282898411|ref|ZP_06306402.1| Thymidylate kinase [Raphidiopsis brookii D9]
gi|281196942|gb|EFA71847.1| Thymidylate kinase [Raphidiopsis brookii D9]
Length = 216
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 29/193 (15%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP- 66
G IVFEG + SGKTTQ + L +L I P T ++ L E P
Sbjct: 3 GKLIVFEGVEGSGKTTQMQMLAQWLQTLGISFLLTREPGGTDLGKNLRKLLLETSYEQPL 62
Query: 67 -DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVA 123
+ A LL++A+R + ++ K NL G DRY+ S +A
Sbjct: 63 DEMAELLLYTADRSQHVSSIIK------------------PNLATGKYILCDRYTNSTIA 104
Query: 124 FSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYEQ--TDFQ 176
+ G++++ Q + G + D + ++ E L R++G + +R EQ +F
Sbjct: 105 YQGYGRGLNMTIIDQLNQIATGGLESDLTIWLDIDVEIGLSRKRGQAELDRMEQETIEFH 164
Query: 177 RKVAENYEKLKDN 189
+V + Y ++ N
Sbjct: 165 HRVQKGYNEIAKN 177
>gi|406708165|ref|YP_006758517.1| dTMP kinase [alpha proteobacterium HIMB59]
gi|406653941|gb|AFS49340.1| dTMP kinase [alpha proteobacterium HIMB59]
Length = 199
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 50/226 (22%)
Query: 11 IVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI---ELPD 67
I FEG + SGK+TQ K L +YL KN I S F P G+ E +RK I + +
Sbjct: 4 ISFEGFEYSGKSTQIKLLQNYLKKNKIKSTFTREPG-----GNKQLEKIRKIILQSDFDN 58
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF--- 124
+ L F A+R+ + SS++ KNL DR+ S A+
Sbjct: 59 LSLILFFFASRFS-----------------LLSSMKT-KNL---VVFDRFFDSTYAYQKI 97
Query: 125 SAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR------KGFGDERYEQTDFQRK 178
++ + + ++ Q EK P FK+N++ L R K F D++Y + F R
Sbjct: 98 TSKDKLLILNLINQIEKKYI-PTITFYFKINKKTLLERKKMRGEKNFFDKKYS-SHFTR- 154
Query: 179 VAENYE-----KLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
+ +NY+ K+ +I IDADK D IV +I+ +K+ +
Sbjct: 155 IQKNYDEIAKIKVGKRKFITIDADKPKD----IVHKEIIENLKRCK 196
>gi|385681289|ref|ZP_10055217.1| thymidylate kinase [Amycolatopsis sp. ATCC 39116]
Length = 215
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 89/226 (39%), Gaps = 42/226 (18%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFP--DRTISTGHIIDEYLRKKIEL 65
G +V EG D +GK T L L+ + FP R++ I + R+ +L
Sbjct: 2 GKLVVIEGLDGAGKRTLTDGLTKALHDQGRTVTTLAFPRYGRSVHADLIHEGLHRRHGDL 61
Query: 66 PDQ--AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
D LL++ +R E P + ++ + + DRY S A
Sbjct: 62 TDSVYGMGLLYALDRREAAPEIRAGLDTHDVVLL-----------------DRYVASNAA 104
Query: 124 FSAAK-----EGMDISWCFQPEK---GLPKPDAVLLFKL-----NEEALQRRK---GFGD 167
+ AA+ +G + W + E GLP PDA +L ++ E A QR G
Sbjct: 105 YGAARLRQHADGEFVRWVREIEIDRFGLPLPDAQILLRVPPAVAAERAEQRASTDAGRAK 164
Query: 168 ERYEQ-TDFQRKVAENYEKLKDNIWID----IDADKDIDTLGLIVK 208
+ +E D Q + A Y++L W+ +D +D L+ +
Sbjct: 165 DAFESDDDLQSRCAAVYDELAAASWLSGWHVVDGAAGVDHAALVTR 210
>gi|50954227|ref|YP_061515.1| thymidylate kinase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|59798229|sp|Q6AGT5.1|KTHY_LEIXX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|50950709|gb|AAT88410.1| thymidylate kinase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 210
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 28/205 (13%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FI EG D GK+TQA L +L P T I + L ++ ++
Sbjct: 9 GLFITLEGGDGVGKSTQAALLERWLLGLGRAVVRTREPGGTDLGAEIREIVLHRRGDIAP 68
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+A LL++A+R T ++ +LE + + Q DRY S VA+ A
Sbjct: 69 RAEALLYAADRAHHVAT------------VVRPALERGEVVLQ----DRYLDSSVAYQGA 112
Query: 128 KEGMDIS----WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERY-----EQTDFQRK 178
+D +GL PD +L L+E + R G RY E+++F +
Sbjct: 113 GRVLDAGEVRELSLWAAEGL-LPDLTILLDLDETTARARLGSARTRYDRLEAERSEFHAR 171
Query: 179 VAENYEKL--KDNIWIDIDADKDID 201
V Y L + ++ +DA + ++
Sbjct: 172 VRAAYLALAAEPQRFLVVDASRPVE 196
>gi|344923440|ref|ZP_08776901.1| thymidylate kinase [Candidatus Odyssella thessalonicensis L13]
Length = 206
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 30/209 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FI FEG + +GK+TQ + L DYL + P T E +R + D
Sbjct: 4 GKFITFEGGEGTGKSTQCQLLADYLRQQGYEVILTREPGGTDGA-----ELIRALLVSGD 58
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
NRW L+ ++ + N DR++ S +A+
Sbjct: 59 --------VNRW--SGVTEALLLNAARVDHWEKVISPALNRGAWVICDRFADSTIAYQGF 108
Query: 128 KEGMDISWCFQPEKG-LP--KPDAVLLFKLN-----EEALQRRKGFGDERYEQTD--FQR 177
G+DI + + LP +PD +F L+ AL RR + R+E+ D F
Sbjct: 109 GRGLDIDFLWNLHNSVLPGVQPDLTFVFDLDPAIGINRALSRRT--SEVRFEKMDIEFHN 166
Query: 178 KVAENYEKLKDNI---WIDIDADKDIDTL 203
++ Y ++ N +DA +DI+T+
Sbjct: 167 RMRHGYLEIAKNHPQRCRLVDAGQDINTI 195
>gi|52841629|ref|YP_095428.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|378777264|ref|YP_005185701.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|59798153|sp|Q5ZVP1.1|KTHY_LEGPH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|52628740|gb|AAU27481.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|364508078|gb|AEW51602.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila ATCC
43290]
Length = 212
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 45/214 (21%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP- 66
G IV EG + +GK+T +V+ L++ I + P G I E LR I+ P
Sbjct: 6 GKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPG-----GTKIGEILRSIIKNPE 60
Query: 67 ------DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
D++ LL A R +LIEQ I + N+ Q DR+ S
Sbjct: 61 YNNVLDDRSELLLLYAAR-------IQLIEQVIKPAL---------NVGQWVIADRFELS 104
Query: 121 GVAFSAAKEGMDI-------SWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYE 171
+A+ MD+ ++C KG KPD L +N E + R K G +R E
Sbjct: 105 TLAYQGGGRKMDMRVINELSNFCL---KGF-KPDLTLYLDINPELGMIRAKSRGKFDRIE 160
Query: 172 Q--TDFQRKVAENYEKL--KDNIWIDIDADKDID 201
Q +F ++ + Y L ++ I IDA++ ++
Sbjct: 161 QESIEFFHRIHDTYHILVKQNPEIIMIDANRSLE 194
>gi|295100620|emb|CBK98165.1| thymidylate kinase [Faecalibacterium prausnitzii L2-6]
Length = 223
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 29/170 (17%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ +G +V EG D SGK TQAK L +L + + FPD + ++ YL +
Sbjct: 1 MSKGRLLVIEGLDGSGKATQAKLLAAHLAEGGRRVMEITFPDYESDSSALVKMYLSGRFG 60
Query: 64 ELPDQ----AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
+ PD AA ++ +R+ T + + I DRY+
Sbjct: 61 DKPDDVNPYAASSFYAVDRYASYKTRWGSFYEAGGIVIA----------------DRYTT 104
Query: 120 SGVAFSAAK---EGMD--ISWCFQPEK---GLPKPDAVLLFKLNEEALQR 161
S +K E D + W F E GLP PDAV+ +++ Q+
Sbjct: 105 SNAVHQCSKLPPEQWDDFLRWAFDYEYRLLGLPAPDAVVYLQVDPAVSQK 154
>gi|289577348|ref|YP_003475975.1| thymidylate kinase [Thermoanaerobacter italicus Ab9]
gi|289527061|gb|ADD01413.1| thymidylate kinase [Thermoanaerobacter italicus Ab9]
Length = 204
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FI FEG D GKTTQ K L +YL K + P T + D L K +
Sbjct: 2 KGKFISFEGIDGCGKTTQIKFLKEYLLKKGYNILVLREPGGTNVGEKVRDILLDKYNFIS 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
LL++++R +L+E+ +I+ + E + L + Y + G A
Sbjct: 62 PVTEMLLYASSR-------AQLVEE----KILPAIEEGKIVLLDRFVDSSYVYQGYARGL 110
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQT--DFQRKVAENY 183
E + I L PD + + EEA++RR +R E+ DF +KV E Y
Sbjct: 111 GIEKVKIVNEIATMGIL--PDVTIYIDITPEEAMKRRGKREADRLERESWDFHKKVREGY 168
Query: 184 EKL 186
KL
Sbjct: 169 IKL 171
>gi|256397499|ref|YP_003119063.1| thymidylate kinase [Catenulispora acidiphila DSM 44928]
gi|256363725|gb|ACU77222.1| thymidylate kinase [Catenulispora acidiphila DSM 44928]
Length = 901
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 56/188 (29%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRT---ISTGHIIDEYLRKKIE 64
G F+ FEG D SGK+TQ L D+L + P T +I+ + +
Sbjct: 497 GTFLSFEGGDGSGKSTQLDLLADWLRGSGHEVVVTREPGGTPLGTKLRNIVLDAHNADVI 556
Query: 65 LPDQAAHLLFSANRWER-EPTLTKLIEQG---ITLEIMHSSLENEKNLDQGCTNDRYSFS 120
P +A L+++A+R + E + +E+G IT + SSL Y +
Sbjct: 557 SP-RAEALIYAADRADHVERVVRPALERGAVVITDRYVDSSLA-------------YQGA 602
Query: 121 GVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDE-RYEQTDFQRK 178
G A SA + + W Q GL PD +L L+ EA +RRK D E DF R+
Sbjct: 603 GRALSAREVELLSQWATQ---GL-MPDVTILMDLDPLEAARRRKTPADRLELESVDFHRR 658
Query: 179 VAENYEKL 186
V Y +L
Sbjct: 659 VRNRYLEL 666
>gi|197284751|ref|YP_002150623.1| thymidylate kinase [Proteus mirabilis HI4320]
gi|227357756|ref|ZP_03842105.1| thymidylate kinase [Proteus mirabilis ATCC 29906]
gi|425067728|ref|ZP_18470844.1| thymidylate kinase [Proteus mirabilis WGLW6]
gi|425072922|ref|ZP_18476028.1| thymidylate kinase [Proteus mirabilis WGLW4]
gi|194682238|emb|CAR41959.1| thymidylate kinase [Proteus mirabilis HI4320]
gi|227162085|gb|EEI47099.1| thymidylate kinase [Proteus mirabilis ATCC 29906]
gi|404596696|gb|EKA97216.1| thymidylate kinase [Proteus mirabilis WGLW4]
gi|404600928|gb|EKB01353.1| thymidylate kinase [Proteus mirabilis WGLW6]
Length = 214
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPS-QFVNFPDRTISTGHIIDEYLRKKIE---L 65
FIV EG + +GKT+ + +VD L + I F P T + E +++ IE +
Sbjct: 6 FIVIEGLEGAGKTSAIQTVVDTLKQQGITDLAFTREPGGT-PLAEKLRELIKQGIEGEKV 64
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVA 123
D+A L+ A R +L+E I + L QG DR+ S A
Sbjct: 65 TDKAELLMLYAAR-------VQLVENVI-----------KPALAQGKWVIGDRHDLSSQA 106
Query: 124 FSAAKEGMDISWCFQPEKGLP---KPDAVLLFKLNEE-ALQRRKGFGD-ERYEQ--TDFQ 176
+ G+D + + KPD L L+ L R + G+ +R E+ DF
Sbjct: 107 YQGGGRGIDKALMKSLRDTVLADFKPDLTLYLDLDPAVGLARARARGELDRIEKESMDFF 166
Query: 177 RKVAENYEKL--KDNIWIDIDADKDIDTLGLIVKDIV 211
+ E Y+ L +D I IDA +DID + ++D++
Sbjct: 167 YRTRERYQALAKEDASIITIDASQDIDKVQADIRDVL 203
>gi|309810854|ref|ZP_07704655.1| dTMP kinase [Dermacoccus sp. Ellin185]
gi|308435160|gb|EFP58991.1| dTMP kinase [Dermacoccus sp. Ellin185]
Length = 268
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 33/220 (15%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
A G F+ FEG D +GKTTQ ++ +L + P T G I L
Sbjct: 50 ADAAAHGLFVTFEGGDGAGKTTQIERAAAWLRELGREVVITREPGGT-PLGVEIRRLLLH 108
Query: 62 KIELPDQAAHLLFSANRWEREPTLTK--LIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
++ +A LL++A+R TL + L + L+ DRY
Sbjct: 109 GDDVASRAEALLYAADRAHHVETLVRPALARGAVVLQ------------------DRYID 150
Query: 120 SGVAFSAAKEGM---DI-SWCFQPEKGLPKPDAVLLFKLNEEALQRRKGF--GDERYEQT 173
S +A+ A + D+ S +GL PD +L ++ E + R+G ++R E+
Sbjct: 151 SSIAYQGAGRALAADDVESISRWATRGL-TPDVTVLIDVSPEVARERRGARGAEDRLERE 209
Query: 174 --DFQRKVAENYEKLK---DNIWIDIDADKDIDTLGLIVK 208
DF +V E++ +L + ++ +DA + D L V+
Sbjct: 210 ADDFHTRVREHFLRLAARDEARYLVLDAGRSRDDLTAAVR 249
>gi|427417584|ref|ZP_18907767.1| thymidylate kinase [Leptolyngbya sp. PCC 7375]
gi|425760297|gb|EKV01150.1| thymidylate kinase [Leptolyngbya sp. PCC 7375]
Length = 220
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 38/225 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST----GHIIDEYLRKKI 63
G IVFEG + SGKTTQ + L +L + S ++P I T G I + +R+ +
Sbjct: 3 GKLIVFEGIEGSGKTTQIQHLRQWLEHKLLSSGPSDYPTGVIVTRQPGGTSIGQEIRQVL 62
Query: 64 ELPDQAAH--------LLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTN 114
P + A LL++A+R + E L +E G H L C
Sbjct: 63 LQPSKNAESLTSRTELLLYAADRTQHVERILIPALETG------HLVL---------C-- 105
Query: 115 DRYSFSGVAFSAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGD-ER 169
DRY+ S VA+ +D I+ G D L KL+ + L+R G+ +R
Sbjct: 106 DRYTASTVAYQGYGRQLDLHLINNLNAIATGGLTSDLTLWLKLDVMQGLKRIANRGEADR 165
Query: 170 YEQ--TDFQRKVAENYE-KLKDNIWIDIDADKDIDTLGLIVKDIV 211
EQ +F R+V + + + + + ++ +DA D + + ++ IV
Sbjct: 166 IEQAGVEFHRRVHKGFSIQAEGDEFVTVDASLDQEAVAEQIQAIV 210
>gi|159902685|ref|YP_001550029.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9211]
gi|238687123|sp|A9BCY7.1|KTHY_PROM4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|159887861|gb|ABX08075.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9211]
Length = 215
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FIV EG D GK+TQ + +L ++ + + N G + + LR
Sbjct: 2 KGHFIVLEGIDGCGKSTQISHISKWLPQSGLMPKNANLYITREPGGTTLGKSLRD----- 56
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGI-TLEIMHSSLENEKNLDQG--CTNDRYSFSGVA 123
LL + LT+L+ E +HS + + LD+G +DR+S S +A
Sbjct: 57 -----LLLHEHETNVPAPLTELLLYAADRAEHIHSLI--QPKLDKGDWVISDRFSGSTLA 109
Query: 124 FSAAKEGMDISWCFQ----PEKGLPKPDAVLLFKLNE-EALQRRKGFGDERYEQ--TDFQ 176
+ G+DI+ + +GL P+ + K++ +++RR +R E F
Sbjct: 110 YQGFGRGLDINLIRRLDAIARQGLV-PEITIFLKISVLTSMRRRAKKSADRMEAEGEGFL 168
Query: 177 RKVAENYEKL-KDNIWIDIDADKD 199
+KVA + ++ + WI I+ ++D
Sbjct: 169 KKVASGFSRIANEEHWITIEGEQD 192
>gi|354566946|ref|ZP_08986117.1| Thymidylate kinase [Fischerella sp. JSC-11]
gi|353544605|gb|EHC14059.1| Thymidylate kinase [Fischerella sp. JSC-11]
Length = 216
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 35/225 (15%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP- 66
G IVFEG + GKTTQ + +L + P T H+ L K ++ P
Sbjct: 3 GKLIVFEGVEGCGKTTQIQLCSKWLQSLGLSVAVTREPGGTPLGLHLRRLLLEKSLDQPI 62
Query: 67 -DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVA 123
D+ LL++A+R + H E NL G DRY+ S +A
Sbjct: 63 ADRTELLLYAADRSQ------------------HVEEELRPNLAAGKIILCDRYTDSTIA 104
Query: 124 FSAAKEGMDISWCFQ----PEKGLPKPDAVLLFKLN-EEALQRRKG--FGDERYEQ--TD 174
+ G+D+S + GL + D L L+ E L R++G +R EQ
Sbjct: 105 YQGYGRGLDMSLIHKLNSIATDGL-ESDITLWLDLDVEVGLTRKRGTTMALDRIEQEAIA 163
Query: 175 FQRKVAENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
F R++ + Y +L + + + IDA ++ + ++D++ +K
Sbjct: 164 FHRRIQQGYAELATTEPHRIVRIDASASVEIVEKQIQDVLTQRLK 208
>gi|170761117|ref|YP_001785385.1| thymidylate kinase [Clostridium botulinum A3 str. Loch Maree]
gi|169408106|gb|ACA56517.1| putative thymidylate kinase [Clostridium botulinum A3 str. Loch
Maree]
Length = 231
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 32/165 (19%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RG IV EG D SGK TQ KKL D L + N + V FP+ + +I YL +
Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60
Query: 65 L-PDQ----AAHLLFSANRW-EREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
+ PD A+ ++ +R+ + + ++G + DRY+
Sbjct: 61 MDPDSVNPYASSTFYAVDRFASYKKDWEEFYQKGGII-----------------IADRYT 103
Query: 119 FSGVAFSAAK--------EGMDISWCFQPEK-GLPKPDAVLLFKL 154
S + AAK ++ W F+ K LP PD V+ +
Sbjct: 104 TSNMIHQAAKIKDVQAKDNFLNWLWDFEFRKFNLPVPDCVIFLDM 148
>gi|229816418|ref|ZP_04446719.1| hypothetical protein COLINT_03471 [Collinsella intestinalis DSM
13280]
gi|229807960|gb|EEP43761.1| hypothetical protein COLINT_03471 [Collinsella intestinalis DSM
13280]
Length = 226
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 36/194 (18%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK----- 61
RG FI EG D GK+TQA+ + L + P G I E +R+
Sbjct: 4 RGLFITVEGIDGCGKSTQARLIAAALEAAGHDVLRLREP-----GGVKISEQIREILLDP 58
Query: 62 -KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+E+ D LL+ A R +L+ Q ++ +L K + DR+ S
Sbjct: 59 ANVEMGDVCELLLYEAAR-------AQLVHQ-----VIRPALAAGKTV----VCDRFYDS 102
Query: 121 GVAFSAAKEGMDISWCFQPEK----GLPKPDAVLLFKLN-EEALQRRKGF-GDERYE--Q 172
A+ A +G+D + Q + G +PD L+F L E+AL+RR G ++R E
Sbjct: 103 TTAYQAFADGLDRNMVSQANELAVDGC-RPDLTLVFDLPVEDALRRRSGREAEDRLELKG 161
Query: 173 TDFQRKVAENYEKL 186
+FQ +VA + +
Sbjct: 162 LEFQERVAAGFRAV 175
>gi|428202559|ref|YP_007081148.1| thymidylate kinase [Pleurocapsa sp. PCC 7327]
gi|427979991|gb|AFY77591.1| thymidylate kinase [Pleurocapsa sp. PCC 7327]
Length = 215
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 82/204 (40%), Gaps = 54/204 (26%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST--------GHIIDEYLRK 61
FIVFEG D SG +TQA L DY F++ DR I + G +I E L+
Sbjct: 5 FIVFEGIDGSGTSTQASLLKDY---------FLSQGDRAIVSPEPSNGPIGKLIREALQN 55
Query: 62 KIELP------DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENE--------KN 107
K L D+ LF+A+R H L N+ ++
Sbjct: 56 KTILIQDSQKFDEQMAYLFAADR--------------------HYHLYNDIDGVFKLIRD 95
Query: 108 LDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQR-RKGF 165
+ RY FS +A++ + D + + P PD V+ L E AL+R R
Sbjct: 96 ENTHVITPRYYFSSLAYNCNNQ-QDFEFVRNLNQRFPNPDLVIYLDLPIEVALERIRARS 154
Query: 166 GDERYEQTDFQRKVAENYEKLKDN 189
E YE + KV NY+ + +N
Sbjct: 155 FKEVYEHQEKLLKVRHNYQYIFEN 178
>gi|406576145|ref|ZP_11051813.1| thymidylate kinase [Janibacter hoylei PVAS-1]
gi|404554448|gb|EKA59982.1| thymidylate kinase [Janibacter hoylei PVAS-1]
Length = 205
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 75/186 (40%), Gaps = 22/186 (11%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FI FEG D +GK+TQ + LV L P T + D L + P
Sbjct: 5 GYFIAFEGGDGAGKSTQVRHLVAALEAAGREVVVTRQPGGTALGAALRDLVLHGEAITP- 63
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+A L+F+A++ + E++ SL + DRY S VA+ A
Sbjct: 64 RAEALVFAADKAQH------------VAEVVLPSLARGAVV----VTDRYVDSSVAYQGA 107
Query: 128 KEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRKGFGDERYE-QTD-FQRKVAEN 182
+ + Q + G PD ++ ++ +RR+G +R E + D F V E
Sbjct: 108 GRTLGVDEVAQLQGWAVGGLTPDLTVVVDVDPAEGRRRRGGSHDRMESEADAFHTAVRER 167
Query: 183 YEKLKD 188
+ L D
Sbjct: 168 FLALAD 173
>gi|269955162|ref|YP_003324951.1| thymidylate kinase [Xylanimonas cellulosilytica DSM 15894]
gi|269303843|gb|ACZ29393.1| thymidylate kinase [Xylanimonas cellulosilytica DSM 15894]
Length = 281
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 95/232 (40%), Gaps = 34/232 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG F+ FEG D GKTTQA+ L D+L V + G + + + ++
Sbjct: 4 RGYFVSFEGGDGGGKTTQARLLGDWLGTALGREVVVTREPGGTALGATLRQLILHGEDMD 63
Query: 67 DQAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
+ LL++A+R +L + +E+G + DRY S VA+
Sbjct: 64 PRTEALLYAADRAHHVASLVRPALERGAVV-----------------ITDRYLDSSVAYQ 106
Query: 126 AA------KEGMDIS-WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTD--FQ 176
+ +E D+S W +GL PD +L ++ R +R E+ D F+
Sbjct: 107 SGGRELSEQEVEDLSLWAV---RGL-LPDVTILLDVDLATSGARMSGDLDRLERVDDAFR 162
Query: 177 RKVAENYEK---LKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLES 225
++ + Y + W+ +DA ++ + V+ V + + P E+
Sbjct: 163 QRTRDAYHRRAAADPARWVVVDAAGTVEEVHAQVRAAVAERLHLPALDPAET 214
>gi|54297309|ref|YP_123678.1| thymidylate kinase [Legionella pneumophila str. Paris]
gi|59798140|sp|Q5X5G6.1|KTHY_LEGPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|53751094|emb|CAH12505.1| hypothetical protein lpp1354 [Legionella pneumophila str. Paris]
Length = 212
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 45/214 (21%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP- 66
G IV EG + +GK+T +V+ L++ I + P G I E LR I+ P
Sbjct: 6 GKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPG-----GTRIGEILRSIIKNPE 60
Query: 67 ------DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
D++ LL A R +LIEQ I + N+ Q DR+ S
Sbjct: 61 YNNVLDDRSELLLLYAAR-------IQLIEQVIKPAL---------NVGQWVIADRFELS 104
Query: 121 GVAFSAAKEGMDI-------SWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYE 171
+A+ M++ ++C KG KPD L +N E + R K G +R E
Sbjct: 105 TLAYQGGGRKMNMRVINELSNFCL---KGF-KPDLTLYLDINPELGMIRAKSRGKFDRIE 160
Query: 172 Q--TDFQRKVAENYEKL-KDNIWI-DIDADKDID 201
Q +F ++ + Y L K N I IDA++ +D
Sbjct: 161 QESIEFFHRIHDTYHVLVKQNPEIMMIDANRSLD 194
>gi|16331301|ref|NP_442029.1| hypothetical protein slr0379 [Synechocystis sp. PCC 6803]
gi|383323043|ref|YP_005383896.1| hypothetical protein SYNGTI_2134 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326212|ref|YP_005387065.1| hypothetical protein SYNPCCP_2133 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492096|ref|YP_005409772.1| hypothetical protein SYNPCCN_2133 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437364|ref|YP_005652088.1| hypothetical protein SYNGTS_2135 [Synechocystis sp. PCC 6803]
gi|451815456|ref|YP_007451908.1| hypothetical protein MYO_121550 [Synechocystis sp. PCC 6803]
gi|1001473|dbj|BAA10099.1| slr0379 [Synechocystis sp. PCC 6803]
gi|339274396|dbj|BAK50883.1| hypothetical protein SYNGTS_2135 [Synechocystis sp. PCC 6803]
gi|359272362|dbj|BAL29881.1| hypothetical protein SYNGTI_2134 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275532|dbj|BAL33050.1| hypothetical protein SYNPCCN_2133 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278702|dbj|BAL36219.1| hypothetical protein SYNPCCP_2133 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451781425|gb|AGF52394.1| hypothetical protein MYO_121550 [Synechocystis sp. PCC 6803]
Length = 236
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 76/190 (40%), Gaps = 19/190 (10%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
+ I FIV EG D SGKTTQ L+ + + + + P G +I + L+
Sbjct: 20 LGKTIMAALFIVLEGIDGSGKTTQGDLLLAHFQRQGLAAVLSPEPTNG-PVGRLIRQALQ 78
Query: 61 KKIELPDQAAHLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGC--TNDRY 117
LF+ N + E + L + H E L Q C RY
Sbjct: 79 GD----------LFTYNDARQFEAQMGYLFAADRHYHLYHPGDGVEAKLAQQCHVITTRY 128
Query: 118 SFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGDERYEQTDFQ 176
FS +A++ E D + + + P+PD V+ L + ALQR GD + +
Sbjct: 129 YFSSLAYNCHTEA-DWEFVQRLNQSFPQPDWVIYLDLPVDLALQR---LGDRQQLEDQAP 184
Query: 177 RKVAENYEKL 186
R+ E EKL
Sbjct: 185 RECYEQREKL 194
>gi|395241991|ref|ZP_10418991.1| Thymidylate kinase [Lactobacillus pasteurii CRBIP 24.76]
gi|394480739|emb|CCI85231.1| Thymidylate kinase [Lactobacillus pasteurii CRBIP 24.76]
Length = 215
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 40/216 (18%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
+G FI FEG D +GK+T K++++ + + P V G I E +RK I
Sbjct: 2 KGTFISFEGPDGAGKSTVLKEILEKVGQEIKPQYIVTRE----PGGSKIAEKIRKIILDP 57
Query: 64 ---ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
++ D+ LL++A+R ++L+E E++ +LE K +DR+ S
Sbjct: 58 ENKQMADRTEALLYAASR-------SQLVE-----EVIKPALEAGKL----VLSDRFIDS 101
Query: 121 GVAFSAAKEGMDISWCFQPEK----GLPKPDAVLLFKLNEE-ALQR---RKGFGDERYEQ 172
+A+ + I ++ K G+ PD L F L+ E LQR + ++R EQ
Sbjct: 102 SLAYQGVGRSLGIDNVYEINKFATDGI-MPDLTLFFDLDPEIGLQRIKLERPDHEDRLEQ 160
Query: 173 --TDFQRKVAENYEKLKD---NIWIDIDADKDIDTL 203
+F KV Y+++ N I+A++++D +
Sbjct: 161 EKINFHYKVYNGYQEINQKYANRIAVINANQELDQV 196
>gi|241889738|ref|ZP_04777036.1| thymidylate kinase [Gemella haemolysans ATCC 10379]
gi|241863360|gb|EER67744.1| thymidylate kinase [Gemella haemolysans ATCC 10379]
Length = 202
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ +G IVFEG D SGKTTQ L ++ +N P + +YL I
Sbjct: 1 MKKGLLIVFEGLDGSGKTTQINLLEEWFKRNKKLVHSTRQPTDFYRNDKRVKDYLEDGI- 59
Query: 65 LPDQAAHLLFSA------NRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
+P+ + L +A N E +PTL+K GI + +DRY
Sbjct: 60 VPNMYSIALLAAADRTYQNEVEIKPTLSK----GINI-----------------ISDRYL 98
Query: 119 FSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQR 161
+S +AF A+ G+ K + +PD ++ ++ ++AL+R
Sbjct: 99 YSSLAFFKAR-GIKYQEIRNINKDIEEPDIIIFLDIDPDKALER 141
>gi|307701598|ref|ZP_07638615.1| dTMP kinase [Mobiluncus mulieris FB024-16]
gi|307613277|gb|EFN92529.1| dTMP kinase [Mobiluncus mulieris FB024-16]
Length = 238
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 44/213 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE-- 64
RGAF+ FEG D GK+TQ K D++ P T + G + E L + E
Sbjct: 22 RGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGT-NLGRQLRELLLEAGETT 80
Query: 65 -----LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
+ +A LLF+A+R + E++ +L N + +DR+
Sbjct: 81 VCEGQVAPRAEALLFAADRAQH------------VAELIVPAL----NAGKIVISDRFMA 124
Query: 120 SGVAFS------AAKEGMDIS-WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERY-- 170
S VA+ KE D+S W G P+ +L L+ E R+ + R
Sbjct: 125 SSVAYQGQGRDLGPKEIRDLSLWA----TGGLTPNLTVLLDLDPEIAWERQQNDETRVSP 180
Query: 171 -----EQTDFQRKVAENYEKL--KDNIWIDIDA 196
E +FQRKV + +L ++ W+ +DA
Sbjct: 181 DRMESEGLEFQRKVRARFRRLAEENETWMVVDA 213
>gi|239618400|ref|YP_002941722.1| thymidylate kinase [Kosmotoga olearia TBF 19.5.1]
gi|259494274|sp|C5CHP2.1|KTHY_KOSOT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|239507231|gb|ACR80718.1| thymidylate kinase [Kosmotoga olearia TBF 19.5.1]
Length = 208
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 16/127 (12%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI FEG D SGK+TQ +YL +N++ F+ P T + I + L + +L +
Sbjct: 2 FISFEGIDGSGKSTQVALFREYLERNSMEYVFIREPGGTQAGEDIREILLHNEYKLFPET 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLF A+R + I E++ +L+ +K DR+ S VA+
Sbjct: 62 ELLLFMASRAQ------------IVREVIIPALKKKKL----VLADRFLDSSVAYQGYGR 105
Query: 130 GMDISWC 136
G+ I
Sbjct: 106 GLSIQMV 112
>gi|346310922|ref|ZP_08852934.1| hypothetical protein HMPREF9452_00803 [Collinsella tanakaei YIT
12063]
gi|345897170|gb|EGX67101.1| hypothetical protein HMPREF9452_00803 [Collinsella tanakaei YIT
12063]
Length = 258
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 77/201 (38%), Gaps = 26/201 (12%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI EG D GK+TQA+ LV L I + P G I E +R
Sbjct: 29 FITLEGVDGVGKSTQARLLVLALEHAGIDVLHLREP-----GGAAISEKIRA-------- 75
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LL E L+ + +++H +E DR+ S A+ A
Sbjct: 76 --LLLDPANSEMGDVCELLLYEAARAQLVHQVIEPALAAGTLVVCDRFYDSTTAYQAHAA 133
Query: 130 GMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRKGFGD-ERYEQTD--FQRKVAENY 183
G+D + Q P L+F L+ A QRR D +R E +Q++VA +
Sbjct: 134 GLDAAMVEQANSLAVNGCHPALTLVFDLDPVAAQRRSARTDADRMEAKGMVYQQRVAGGF 193
Query: 184 EKLK----DNIWIDIDADKDI 200
K+ + I IDA DI
Sbjct: 194 RKIAKQDPQRVKI-IDASGDI 213
>gi|313680451|ref|YP_004058190.1| thymidylate kinase [Oceanithermus profundus DSM 14977]
gi|313153166|gb|ADR37017.1| thymidylate kinase [Oceanithermus profundus DSM 14977]
Length = 209
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 24/210 (11%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI FEG + SGK+TQA +L L + + + P T + L + + +A
Sbjct: 7 FISFEGPEGSGKSTQAARLAARLRARGVSTVLTHEPGGTELGREVRRWLLHQGAAMSPEA 66
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LL+SA+R E + + LE DR+ S A+
Sbjct: 67 EFLLYSADRAEH----------------VRTVLEPALAAGSFVICDRFVDSSYAYQGYGR 110
Query: 130 GMDISWCFQPEKGL---PKPDAVLLFKL-NEEALQRRKGFGDERYEQTDFQRKVAENYEK 185
G+D++W G+ +P L L E L R G E F R+V E Y
Sbjct: 111 GLDLAWLRSVSDGILRGVRPSLTFLLDLPPERGLARLAGRDRLEGESLTFHRRVREGYRS 170
Query: 186 LKDN---IWIDIDADKDIDTL-GLIVKDIV 211
L + ++ +DA+ D L I ++++
Sbjct: 171 LAQSEPERFVVLDAELPEDELEARIAREVI 200
>gi|427391093|ref|ZP_18885499.1| thymidylate kinase [Actinobaculum massiliae ACS-171-V-Col2]
gi|425732431|gb|EKU95241.1| thymidylate kinase [Actinobaculum massiliae ACS-171-V-Col2]
Length = 207
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 90/221 (40%), Gaps = 37/221 (16%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ RG FI FEG D +GK+TQ + L +L P P T G + + L E
Sbjct: 1 MARGLFISFEGGDGAGKSTQVQLLAQWLEARGYPVVVTREPGGT-PLGKRVRQMLLHGGE 59
Query: 65 LPDQAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+ +A LL++A+R + L + +E G DRY S +A
Sbjct: 60 VSPRAEALLYAADRAQHIDALVRPALEDGAV-----------------VITDRYIDSSLA 102
Query: 124 FSAAK---EGM-DIS-WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDE----RYEQTD 174
+ EG+ +IS W Q GL PD +L L E R G E E
Sbjct: 103 YQGGARELEGIREISEWAVQ---GL-WPDVTILLDLPETVGLDRAGNEQEADRIESEGAS 158
Query: 175 FQRKVAENYEKLK----DNIWIDIDADKDIDTLGLIVKDIV 211
F V + + +L + I + +D + I+ + V+D++
Sbjct: 159 FHADVRKRFLQLAAAEPERISV-LDGSQSIEDIARAVRDLI 198
>gi|54294285|ref|YP_126700.1| thymidylate kinase [Legionella pneumophila str. Lens]
gi|81601377|sp|Q5WWU9.1|KTHY_LEGPL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|53754117|emb|CAH15590.1| hypothetical protein lpl1350 [Legionella pneumophila str. Lens]
gi|307610103|emb|CBW99644.1| hypothetical protein LPW_14121 [Legionella pneumophila 130b]
Length = 212
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 45/214 (21%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP- 66
G IV EG + +GK+T +V+ L++ I + P G I E LR I+ P
Sbjct: 6 GKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPG-----GTKIGEILRSIIKNPE 60
Query: 67 ------DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
D++ LL A R +LIEQ I + N+ Q DR+ S
Sbjct: 61 YNNVLDDRSELLLLYAAR-------IQLIEQVIKPAL---------NVGQWVIADRFELS 104
Query: 121 GVAFSAAKEGMDI-------SWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYE 171
+A+ MD+ ++C KG KPD L +N E + R K G +R E
Sbjct: 105 TLAYQGGGRKMDMRVINELSNFCL---KGF-KPDLTLYLDINPELGMIRAKSRGKFDRIE 160
Query: 172 Q--TDFQRKVAENYEKL-KDNIWI-DIDADKDID 201
Q +F ++ + Y L K N I IDA++ ++
Sbjct: 161 QESIEFFHRIHDTYHILVKQNPEIMMIDANRSLE 194
>gi|406871895|gb|EKD22600.1| hypothetical protein ACD_84C00039G0007 [uncultured bacterium]
Length = 231
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 86/212 (40%), Gaps = 25/212 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG F+ EG D SGKTT + L +YL P T G + E L P
Sbjct: 6 RGMFLTCEGVDGSGKTTNVQWLAEYLRAGGKEVYVTREPGGT-PLGEKLREILFTNEMDP 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ A L+F++ R E + L+E+GI + +DR++ S
Sbjct: 65 ETEALLMFASRRDHVERVIKPLLEKGIWV-----------------ISDRFTDSSFGLQG 107
Query: 127 AKEGMDISWCFQPEKGLP---KPDAVLLFKLN-EEALQRRKGFG-DERYEQTD--FQRKV 179
G +I EK + +PD +LF L E A +R G +R+E D + ++V
Sbjct: 108 FGGGANILGLNDLEKFVHPNFEPDLTILFDLPVEVARERNAGTAKKDRFELMDLEYHKRV 167
Query: 180 AENYEKLKDNIWIDIDADKDIDTLGLIVKDIV 211
+ + KD + T+ +I DIV
Sbjct: 168 RQGFLYRKDQSGDRVQLINADQTVEMIRHDIV 199
>gi|269976291|ref|ZP_06183287.1| thymidylate kinase [Mobiluncus mulieris 28-1]
gi|269935620|gb|EEZ92158.1| thymidylate kinase [Mobiluncus mulieris 28-1]
Length = 246
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 44/213 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE-- 64
RGAF+ FEG D GK+TQ K D++ P T + G + E L + E
Sbjct: 30 RGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGT-NLGRQLRELLLEAGETT 88
Query: 65 -----LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
+ +A LLF+A+R + E++ +L N + +DR+
Sbjct: 89 VCEGQVAPRAEALLFAADRAQH------------VAELIVPAL----NAGKIVISDRFMA 132
Query: 120 SGVAFS------AAKEGMDIS-WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERY-- 170
S VA+ KE D+S W G P+ +L L+ E R+ + R
Sbjct: 133 SSVAYQGQGRDLGPKEIRDLSLWA----TGGLTPNLTVLLDLDPEIAWERQQNDETRVSP 188
Query: 171 -----EQTDFQRKVAENYEKL--KDNIWIDIDA 196
E +FQRKV + +L ++ W+ +DA
Sbjct: 189 DRMEGEGLEFQRKVRARFRRLAEENETWMVVDA 221
>gi|306817710|ref|ZP_07451452.1| thymidylate kinase [Mobiluncus mulieris ATCC 35239]
gi|304649524|gb|EFM46807.1| thymidylate kinase [Mobiluncus mulieris ATCC 35239]
Length = 246
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 44/213 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE-- 64
RGAF+ FEG D GK+TQ K D++ P T + G + E L + E
Sbjct: 30 RGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGT-NLGRQLRELLLEAGETT 88
Query: 65 -----LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
+ +A LLF+A+R + E++ +L N + +DR+
Sbjct: 89 VCEGQVAPRAEALLFAADRAQH------------VAELIVPAL----NAGKIVISDRFMA 132
Query: 120 SGVAFS------AAKEGMDIS-WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERY-- 170
S VA+ KE D+S W G P+ +L L+ E R+ + R
Sbjct: 133 SSVAYQGQGRDLGPKEIRDLSLWA----TGGLTPNLTVLLDLDPEIAWERQQNDETRVSP 188
Query: 171 -----EQTDFQRKVAENYEKLKDN--IWIDIDA 196
E +FQRKV + +L + W+ +DA
Sbjct: 189 DRMEGEGLEFQRKVRARFRRLAEGNETWMVVDA 221
>gi|8247943|sp|Q55593.2|KTHY_SYNY3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|407961321|dbj|BAM54561.1| hypothetical protein BEST7613_5630 [Bacillus subtilis BEST7613]
Length = 212
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 78/188 (41%), Gaps = 23/188 (12%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FIV EG D SGKTTQ L+ + + + + P G +I + L+
Sbjct: 5 FIVLEGIDGSGKTTQGDLLLAHFQRQGLAAVLSPEPTNG-PVGRLIRQALQGD------- 56
Query: 70 AHLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGC--TNDRYSFSGVAFSA 126
LF+ N + E + L + H E L Q C RY FS +A++
Sbjct: 57 ---LFTYNDARQFEAQMGYLFAADRHYHLYHPGDGVEAKLAQQCHVITTRYYFSSLAYNC 113
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKLNEE-ALQR---RKGFGD----ERYEQTDFQRK 178
E D + + + P+PD V+ L + ALQR R+ D E YEQ +
Sbjct: 114 HTEA-DWEFVQRLNQSFPQPDWVIYLDLPVDLALQRLGDRQQLEDQAPRECYEQREKLIS 172
Query: 179 VAENYEKL 186
V NY+++
Sbjct: 173 VHRNYDRI 180
>gi|189499981|ref|YP_001959451.1| dTMP kinase [Chlorobium phaeobacteroides BS1]
gi|189495422|gb|ACE03970.1| dTMP kinase [Chlorobium phaeobacteroides BS1]
Length = 217
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 41/213 (19%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
I FEG D +GK+TQ KKL YL + + P T+ I + L K ++
Sbjct: 2 LITFEGIDGAGKSTQVKKLKKYLVEKGREVLTLREPGGTVVAEKIRELLLESKHDITPMG 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LLFSA+R E L++Q I E+ S + DR+ S A+
Sbjct: 62 ELLLFSASRAE-------LVQQVILPELEKSKV---------IILDRFFDSTTAYQGYGR 105
Query: 130 GMDI----------SWCFQPEKGL---PKPDAVLLFKLNEEALQRRKGFGD---ERYEQT 173
G+D+ ++ QP+ P+ L+ K +E++L F + +R E +
Sbjct: 106 GLDLNMLQKINDISTFGLQPDLTFFLDISPEDALIRKFSEKSLPL--AFENNEMDRMESS 163
Query: 174 --DFQRKVAENYEKL-----KDNIWIDIDADKD 199
F ++V E Y KL K + D AD D
Sbjct: 164 GLSFYQRVREGYLKLAIAEKKRFVLFDACADPD 196
>gi|385800897|ref|YP_005837301.1| thymidylate kinase [Halanaerobium praevalens DSM 2228]
gi|309390261|gb|ADO78141.1| thymidylate kinase [Halanaerobium praevalens DSM 2228]
Length = 208
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 79/193 (40%), Gaps = 33/193 (17%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE 64
+ G FI FEG + SGKTTQ +L DYL KN P T I L +
Sbjct: 1 MAEGFFITFEGIEGSGKTTQINRLADYLRKNEHDVLISREPGGTELGQKIRKILLDPHFD 60
Query: 65 LPDQAAH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSG 121
D LL++A+R + H + + L G +DR+ S
Sbjct: 61 TMDYKTEILLYAADRAQ------------------HVKEKIKPALKAGKIVISDRFVDSN 102
Query: 122 VAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLN-EEALQRRKGF-----GD--ERY 170
+A+ AA G+D +Q G PD + ++ ++ L+R + GD ER
Sbjct: 103 LAYQAAGRGLDYEQVYQINNWVIGSTWPDLTFILDIDIKKGLERARKLSFDQAGDRLER- 161
Query: 171 EQTDFQRKVAENY 183
E DF ++V E Y
Sbjct: 162 EVDDFHQRVREAY 174
>gi|227876763|ref|ZP_03994872.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
gi|227842660|gb|EEJ52860.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
Length = 246
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 44/213 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE-- 64
RGAF+ FEG D GK+TQ K D++ P T + G + E L + E
Sbjct: 30 RGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGT-NLGRQLRELLLEAGETT 88
Query: 65 -----LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
+ +A LLF+A+R + E++ +L N + +DR+
Sbjct: 89 VCEGQVAPRAEALLFAADRAQH------------VAELIVPAL----NAGKIVISDRFMA 132
Query: 120 SGVAFS------AAKEGMDIS-WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERY-- 170
S VA+ KE D+S W G P+ +L L+ E R+ + R
Sbjct: 133 SSVAYQGQGRDLGPKEIRDLSLWA----TGGLTPNLTVLLDLDPEIAWERQQNDETRVSP 188
Query: 171 -----EQTDFQRKVAENYEKL--KDNIWIDIDA 196
E +FQRKV + +L ++ W+ +DA
Sbjct: 189 DRMEGEGLEFQRKVRARFRRLAEENETWMVVDA 221
>gi|157363328|ref|YP_001470095.1| dTMP kinase [Thermotoga lettingae TMO]
gi|157313932|gb|ABV33031.1| dTMP kinase [Thermotoga lettingae TMO]
Length = 202
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDE-YLRKKIELPDQ 68
I FEG D SGK TQ + + YL N+P V P T G I+ E L+ + ++ +
Sbjct: 2 LISFEGIDGSGKGTQLRLFLSYLKNKNLPYIHVREPGGT-ELGEILREIVLKGQFQIYPK 60
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
A LLF A+R +L+ Q I+ + EN+ + + + GV
Sbjct: 61 AELLLFLASR-------AQLVSQ----IILPALKENKVVVADRFIDSSVVYQGVGRELGP 109
Query: 129 EGMDISWCFQPEKGLPKPDAVLLFKLN---EEALQRRKGFGDERYEQTDFQRKVAENYEK 185
E ++ F + GL KPD L F ++ E AL+R++ F E +F +KV + Y +
Sbjct: 110 ELVEKLNDFATD-GL-KPD--LTFYIDVPVETALKRKRIFDRIESEGIEFLKKVRKAYLE 165
Query: 186 L 186
L
Sbjct: 166 L 166
>gi|157412486|ref|YP_001483352.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9215]
gi|166987706|sp|A8G2D5.1|KTHY_PROM2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|157387061|gb|ABV49766.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9215]
Length = 212
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FIV EG D GKTTQ +L +L + + + G + + LR I
Sbjct: 2 KGKFIVIEGIDGCGKTTQIDELSKWLPSSGLIKKGSKLITTREPGGSHLGKRLRGLILDN 61
Query: 67 DQ-------AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
+Q A LL+SA+R E +I+ +L N + +DR+S
Sbjct: 62 NQNNKPSPLAELLLYSADRAEH------------VYKIISPALNN----NDWVISDRFSD 105
Query: 120 SGVAFSAAKEGMDISWCFQPEKGLPK---PDAVLLFKLN-EEALQRRKGFGDERYEQ--T 173
S +A+ +++ E + + PD +++ EE++ RRK +R E
Sbjct: 106 STLAYQGYGRNINLEIIKNIESIVCQGESPDLTFFLEISPEESIFRRKNQIPDRIESEGI 165
Query: 174 DFQRKVAENYEKL-KDNIWIDIDADKDIDTLGLIVKDIVIDTIKKS 218
+F KV + ++ + K+ W I A ++I T+ +K+ V++ K+
Sbjct: 166 EFLEKVNKGFKIIAKEKNWTVISASQNIKTISNQIKETVLNNFSKN 211
>gi|317050750|ref|YP_004111866.1| thymidylate kinase [Desulfurispirillum indicum S5]
gi|316945834|gb|ADU65310.1| thymidylate kinase [Desulfurispirillum indicum S5]
Length = 208
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 76/195 (38%), Gaps = 34/195 (17%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FI FEG D +GKTTQ L YL+ +I P T I + + L
Sbjct: 3 GRFISFEGPDGAGKTTQLSLLSRYLDDRDILHHCTREPGGTPGAEAIRNLIFDSRHNLVP 62
Query: 68 QAAHLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+A LLF+A R + E + L+E+GI + DR++ S + +
Sbjct: 63 RAELLLFAAARAQHVEERIMPLLEKGIWV-----------------LCDRFTLSTLVYQG 105
Query: 127 AKEGMDISWCFQPEK----GLPKPDAVLLFKLNEEALQRRKGFGDERYEQT--------D 174
G+D Q GL P L+ + EA Q R +R E D
Sbjct: 106 YGRGLDRELIGQLNAIATCGL-APHMQLVLDVEAEAGQNRV---QQRLENNNSFDALSED 161
Query: 175 FQRKVAENYEKLKDN 189
F R+V + ++ +
Sbjct: 162 FHRRVVAGFREVASH 176
>gi|261330431|emb|CBH13415.1| thymidylate kinase, putative [Trypanosoma brucei gambiense DAL972]
Length = 345
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 78/208 (37%), Gaps = 59/208 (28%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
GA IVFEG D +GK TQ + + L+K ++FP S H + +RK +
Sbjct: 128 GAVIVFEGGDGAGKATQTEYMRKRLDKEGKAHASLDFP----SDKHRYGKLIRKVLSGER 183
Query: 68 QAAH--------LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
A H LLFS NR++ P L + G + + DRY
Sbjct: 184 GALHDLDPKLFSLLFSLNRFDTLPELRYWLTHGKKILL-----------------DRYYT 226
Query: 120 SGVAFSAAK-------------EGMDISWCFQPEKGLPKPDAVLLFKLNEE----ALQRR 162
S A+K E +++ W LP PD L L A+QR
Sbjct: 227 SNFGHQASKLEESERSDFIRHLEQLELEWL-----KLPPPDVALYLDLPPAAALVAMQR- 280
Query: 163 KGFGDERYEQTDFQRKVAENYEKLKDNI 190
DE+ E D +Y K+N+
Sbjct: 281 ----DEKRESLDIHETAGLSY---KENV 301
>gi|215400691|ref|YP_002332309.1| putative thymidylate kinase [Lactococcus lactis]
gi|169641050|gb|ACA61269.1| putative thymidylate kinase [Lactococcus lactis]
Length = 251
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 25/217 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+ IVFEG D SGKTTQ L + + P + +YL I
Sbjct: 54 KNLLIVFEGLDGSGKTTQIDMLYQWFENKKLKVFTTKQPTDYYRNDKRVRDYLDNGIAPN 113
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ LL +A+R IT EI K + DRY +S +AF
Sbjct: 114 MYSIALLAAADR-----------TYQITSEIF------PKISESNIICDRYLYSSLAFFK 156
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQR---RKGFGDERYEQTD--FQRKVA 180
A+ G+D KG+P PD + + E AL R R G D +YE+ + +V
Sbjct: 157 AR-GIDYKEILMINKGVPTPDVTVFLDVPPERALDRVRQRDG-KDIKYEEKNELVFNQVR 214
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
+N+ + + +D+ ID + I+ + V + + K
Sbjct: 215 QNFLDVLPKNALIVDSTLGIDKVHQIITNFVSEVMDK 251
>gi|217077269|ref|YP_002334987.1| tmk thymidylate kinase [Thermosipho africanus TCF52B]
gi|226732664|sp|B7IHT2.1|KTHY_THEAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|217037124|gb|ACJ75646.1| tmk thymidylate kinase [Thermosipho africanus TCF52B]
Length = 201
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 34/215 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI FEG D SGK+TQ L YL + P TI I + L + + ++
Sbjct: 2 FIAFEGIDGSGKSTQLNLLSQYLKSKGKKVLNIREPGGTILGEKIREILLDNNLNINKRS 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSAA 127
LLF A+R +L+E+ I + +L +G DR+S S +A+
Sbjct: 62 ELLLFLASR-------AQLVEEVI-----------KPHLKRGFFVLADRFSDSSIAYQGG 103
Query: 128 KEGMDISWC-----FQPEKGLPKPDAVLLFKL-NEEALQRRKGFGDERYEQTD--FQRKV 179
+ + F + PD V + + A++R K +R E+ F KV
Sbjct: 104 ARNIGVETVSTLNDFATDN--IYPDIVFYIDIPTKIAMERLKDKNLDRLEKEGQIFLEKV 161
Query: 180 AENY---EKLKDNIWIDIDADKDIDTLGLIVKDIV 211
Y KL+DN +I ID K ID + +K IV
Sbjct: 162 RNTYLKLSKLRDNFFI-IDGTKSIDNVFAEIKSIV 195
>gi|311028959|ref|ZP_07707049.1| thymidylate kinase [Bacillus sp. m3-13]
Length = 212
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 95/237 (40%), Gaps = 49/237 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
+G FI FEG + +GKT+ +KL L + P P G I E +R I
Sbjct: 2 KGLFITFEGPEGAGKTSVIQKLGAELTEQEFPILLTREPG-----GIAIAEQIRNVILDC 56
Query: 64 ---ELPDQAAHLLFSANRWER--EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
E+ + LL++A R + E + L E I L C DR+
Sbjct: 57 DNTEMDARTEALLYAAARRQHLVERVIPALKENKIVL----------------C--DRFI 98
Query: 119 FSGVAFSAAKEGMDISWC-----FQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER---- 169
S +A+ G+ + F EK + P + F + EA +R + R
Sbjct: 99 DSSLAYQGYARGIGVEDVLSINEFATEKMM--PSLTIYFDIEPEAGLKRIAANNNREINR 156
Query: 170 --YEQTDFQRKVAENY----EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQF 220
E+ DF KV E Y EK + I + +DA D +++ V++++I K F
Sbjct: 157 LDQEKLDFHYKVKEGYDLVKEKYGERIRV-VDASMDFESVCNQVREVLISYFSKHGF 212
>gi|167747824|ref|ZP_02419951.1| hypothetical protein ANACAC_02546 [Anaerostipes caccae DSM 14662]
gi|317473408|ref|ZP_07932702.1| thymidylate kinase [Anaerostipes sp. 3_2_56FAA]
gi|167653186|gb|EDR97315.1| dTMP kinase [Anaerostipes caccae DSM 14662]
gi|316899058|gb|EFV21078.1| thymidylate kinase [Anaerostipes sp. 3_2_56FAA]
Length = 216
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 89/228 (39%), Gaps = 41/228 (17%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI---- 63
G FI EG D +GK+TQ L YL + P G +I E +R+ I
Sbjct: 7 GIFITMEGPDGAGKSTQIDLLRVYLLQKGYDIIVCREPG-----GTVISEAIREVILNRD 61
Query: 64 --ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSF 119
+ LL++A R +L+E+ I + LDQG DR+
Sbjct: 62 YKNMGHMTELLLYAAAR-------AQLVEEVI-----------QPALDQGKVVICDRFIE 103
Query: 120 SGVAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRKGFGDE----RYEQ 172
S + G+ + ++ + G PD LL ++ E RK E E+
Sbjct: 104 SSAVYQGIARGLGVDLVYEVNRFAVGNTMPDITLLLDVDAETGIGRKKQQAELDRMESEK 163
Query: 173 TDFQRKVAENYEKLKD---NIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
+F RKV E Y L + N + ID I+ + +K V D + +
Sbjct: 164 LEFHRKVVEGYRLLAERDKNRMVKIDGRNSIEEIHRQIKVAVDDALTR 211
>gi|339626488|ref|YP_004718131.1| thymidylate kinase [Sulfobacillus acidophilus TPY]
gi|379005944|ref|YP_005255395.1| thymidylate kinase [Sulfobacillus acidophilus DSM 10332]
gi|339284277|gb|AEJ38388.1| Thymidylate kinase [Sulfobacillus acidophilus TPY]
gi|361052206|gb|AEW03723.1| thymidylate kinase [Sulfobacillus acidophilus DSM 10332]
Length = 213
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 28/185 (15%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G +I FEG D GKTTQA +L ++L ++ + V P T + G + + +E+ D
Sbjct: 9 GHWISFEGIDGVGKTTQASRLAEWLVQHGRDALLVREPGGT-ALGEALRHMILHDVEIHD 67
Query: 68 QAAH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
A LLF+A R E++ + + + +DR++ S +A+
Sbjct: 68 AWAEFLLFAAAR----------------AELVTTVIRPALAAGRWVISDRFTDSSIAYQV 111
Query: 127 AKEGMDISWCFQPEKGLP---KPDAVLLFKLNEEALQRRKGFGDERYEQTD--FQRKVAE 181
G+ Q + + +PD + L+ + L R GD+R EQ + + +V E
Sbjct: 112 FGRGLPWGPVDQVNRWISRGERPDMTVW--LDGQPLTAR---GDDRLEQREAAYFDRVQE 166
Query: 182 NYEKL 186
Y L
Sbjct: 167 GYAWL 171
>gi|220927615|ref|YP_002504524.1| thymidylate kinase [Clostridium cellulolyticum H10]
gi|219997943|gb|ACL74544.1| thymidylate kinase [Clostridium cellulolyticum H10]
Length = 206
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G FI EG D SGKTTQ K + YL P G I E +R I P
Sbjct: 3 KGLFITVEGTDGSGKTTQIKLMEQYLKDMGNEVVLSREPG-----GTRISEMIRDLILDP 57
Query: 67 DQ------AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ +L++A R + +++ ++E+ K++ DR+ S
Sbjct: 58 ENKDISPLTEMMLYAAARAQH------------VSQVIRPAIESGKSV----ICDRFVDS 101
Query: 121 GVAFSAAKEGMDISWCFQPEKGL---PKPDAVLLFKLNEE-ALQRR-KGFGDERYEQ--T 173
A+ G+D+ + PD L+ A++RR K G +R EQ
Sbjct: 102 SYAYQGCGRGVDLKTIADVNRAAIDGVVPDITFFLDLDPRVAMERRVKSTGADRIEQEKM 161
Query: 174 DFQRKVAENYEKL 186
DF +V E YE++
Sbjct: 162 DFHIRVYEGYERM 174
>gi|445497045|ref|ZP_21463900.1| thymidylate kinase Tmk [Janthinobacterium sp. HH01]
gi|444787040|gb|ELX08588.1| thymidylate kinase Tmk [Janthinobacterium sp. HH01]
Length = 207
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 21/159 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI FEG D +GK+T + DYL + P T + D L +K+ L
Sbjct: 5 RGKFITFEGIDGAGKSTHIAFVGDYLKNKGVKLVSSREPGGTPLGEKLRDLVLHEKMHLE 64
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+A LL A+R E + ++IE +HS +DR++ + A+
Sbjct: 65 TEA--LLMFASRREH---IAQVIEPA-----LHSG--------AWAISDRFTDASFAYQG 106
Query: 127 AKEGMDISWCFQPEKGLP---KPDAVLLFKLNEEALQRR 162
GMD++ E+ + +PD LLF + E + R
Sbjct: 107 GGRGMDLAKLEALEQWVHPHLQPDLTLLFDVPLEVARAR 145
>gi|350564911|ref|ZP_08933718.1| thymidylate kinase [Peptoniphilus indolicus ATCC 29427]
gi|348664294|gb|EGY80800.1| thymidylate kinase [Peptoniphilus indolicus ATCC 29427]
Length = 204
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR------ 60
RG FI FEG D GKTT A K+ + L++ +F R G I E +R
Sbjct: 2 RGLFIAFEGPDGCGKTTIANKVYEKLSR-----RFNCLKTRE-PGGTEISEKIRDFILDN 55
Query: 61 KKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+E+ + LL++A+R + + +LIE + + + +R+ S
Sbjct: 56 NNVEMTSRTEALLYAASRAQH---VEQLIEPAL-------------KMGKIVICERFIVS 99
Query: 121 GVAFSAAKEGM---DISWCFQPEKGLPKPDAVLLFKLNE-EALQRRKGFGDER--YEQTD 174
+ + G+ + G PD LF + + +++R+ G +R E+ +
Sbjct: 100 SLVYQGYARGLGERQVQEINDFAVGEVSPDITFLFDVKQNNSVERKLKAGGDRLELEKGE 159
Query: 175 FQRKVAENYEKL-KDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
F KV E YE L K + IDA + ++ + D++++ + +
Sbjct: 160 FHSKVREGYESLIKSGRYTVIDATQSVEEVFQNCMDVILERLDR 203
>gi|297622813|ref|YP_003704247.1| thymidylate kinase [Truepera radiovictrix DSM 17093]
gi|297163993|gb|ADI13704.1| thymidylate kinase [Truepera radiovictrix DSM 17093]
Length = 217
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 89/226 (39%), Gaps = 39/226 (17%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI FEG + SGKTTQ +L L P G + E LR + P
Sbjct: 8 RGVFIAFEGPEGSGKTTQLGRLAARLEALGQVPLTTKEPG-----GTAVGERLRALVLDP 62
Query: 67 DQAAH-----LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
H LL++A+R E++ S L+ + DR++ +
Sbjct: 63 ALRMHPETELLLYAASR----------------AELVASVLKPALAAGRVVLCDRFTGAT 106
Query: 122 VAFSAAKEGMDISWC----FQPEKGLPKPDAVLLFKLNEE-ALQR--RKGFGDERYEQT- 173
VA+ G+ W + GL KP LLF L E L R R+G D R EQ
Sbjct: 107 VAYQGEGRGLPKDWIGVLNARVTGGL-KPHLTLLFDLPPEVGLARVARRGARD-RLEQAA 164
Query: 174 -DFQRKVAENY--EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
F +V + + +D W +DA + + + V +V ++
Sbjct: 165 FAFHERVRRGFLQQAEQDPSWHVLDASRPEEEVAGAVWRLVAPLLR 210
>gi|333372997|ref|ZP_08464916.1| thymidylate kinase [Desmospora sp. 8437]
gi|332971044|gb|EGK10014.1| thymidylate kinase [Desmospora sp. 8437]
Length = 218
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 27/190 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR--KKIE 64
+G FI EG + +GK+TQ +L +L K +P P T G I E L E
Sbjct: 2 KGCFITLEGPEGAGKSTQTTRLKRFLEKRRLPCIATREPGGT-PIGDRIRELLLDPGAGE 60
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ QA LL++A+R +L+E E++ +L EK C DRY S + +
Sbjct: 61 MSLQAEVLLYAASR-------AQLVE-----EVIRPAL--EKGWTVLC--DRYVDSSMVY 104
Query: 125 SAAKEGM---DISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDER----YEQTDFQ 176
A G D+ Q PD L L EE+++R +G G R + D+
Sbjct: 105 QAYGAGANPKDVRQVNQVAIQGLLPDRTYLLDLPLEESIRRLEGRGISRDRIELKGQDYH 164
Query: 177 RKVAENYEKL 186
+KV + + L
Sbjct: 165 QKVRDGFHHL 174
>gi|160902557|ref|YP_001568138.1| thymidylate kinase [Petrotoga mobilis SJ95]
gi|160360201|gb|ABX31815.1| thymidylate kinase [Petrotoga mobilis SJ95]
Length = 232
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 37/179 (20%)
Query: 5 IPRGAFIVFE-GCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI 63
+ +G IV E G D SGK TQA+ L L I + V FP+ + +I YL+ +
Sbjct: 1 MKKGMLIVIESGTDASGKATQAEILSQRLKDEKIKAYKVEFPNYKSDSSALIKMYLKGEF 60
Query: 64 -ELPDQ----AAHLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRY 117
E P+ AA F+ +R+ + L L E G L +DRY
Sbjct: 61 GENPEAINPYAASTFFAVDRFATYQKELKPLYESGGIL-----------------ISDRY 103
Query: 118 SFSGVAFSAAK--------EGMDISWCFQPEK-GLPKPDAVLLF----KLNEEALQRRK 163
+ S + + ++K E ++ W + K LPKP+ V+ K++ E L++RK
Sbjct: 104 TTSNMIYQSSKFENQSEKDEFLEWLWDLEFNKFNLPKPNYVIFLDIPPKISIELLRKRK 162
>gi|227827632|ref|YP_002829412.1| dTMP kinase [Sulfolobus islandicus M.14.25]
gi|229584836|ref|YP_002843338.1| dTMP kinase [Sulfolobus islandicus M.16.27]
gi|238619800|ref|YP_002914626.1| dTMP kinase [Sulfolobus islandicus M.16.4]
gi|385773302|ref|YP_005645868.1| dTMP kinase [Sulfolobus islandicus HVE10/4]
gi|385775934|ref|YP_005648502.1| dTMP kinase [Sulfolobus islandicus REY15A]
gi|227459428|gb|ACP38114.1| dTMP kinase [Sulfolobus islandicus M.14.25]
gi|228019886|gb|ACP55293.1| dTMP kinase [Sulfolobus islandicus M.16.27]
gi|238380870|gb|ACR41958.1| dTMP kinase [Sulfolobus islandicus M.16.4]
gi|323474682|gb|ADX85288.1| dTMP kinase [Sulfolobus islandicus REY15A]
gi|323477416|gb|ADX82654.1| dTMP kinase [Sulfolobus islandicus HVE10/4]
Length = 189
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 81/197 (41%), Gaps = 35/197 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLN---KNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
I EG D SGKTT A L ++L K N+ F + I L +KI
Sbjct: 4 LIAIEGIDGSGKTTLANLLKEHLESKMKLNVIVTREPFSEDIIK--------LIEKIGWN 55
Query: 67 DQAAH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D LLF+A+R EI + L K+ D DRY FS +A+
Sbjct: 56 DPILLVLLFAADR-----------------EIHVNWLSKIKDADL-IILDRYYFSSIAYQ 97
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENYE 184
A G+D W PKPD V+L L E A+ R K E+ KV E Y
Sbjct: 98 GAL-GVDEQWIKMVNSYFPKPDMVILLDLPIEVAISRIKNDKFNFEEKIKSLAKVREKYL 156
Query: 185 KLKD--NIWIDIDADKD 199
KL N +I +DA KD
Sbjct: 157 KLAKEYNFYI-VDASKD 172
>gi|406994198|gb|EKE13221.1| hypothetical protein ACD_13C00052G0010 [uncultured bacterium]
Length = 217
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 27/166 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEY---LRKKI 63
RG FIVFEG SGK TQ + D L++N I + + P I I E LR K
Sbjct: 4 RGKFIVFEGIGGSGKGTQIELAKDLLDRNGIKAIYTREPG-GIEPAEKIRELIFTLRDKK 62
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRYSFSG 121
+ + +LF A R KL G+ + NLD+G DR S
Sbjct: 63 LIKAEGQMVLFFAAR--------KLWVDGVVV----------PNLDKGANVLTDRCHTST 104
Query: 122 VAFSAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLNEEALQRRKG 164
A+ E D I G KPDA++L +++E R+G
Sbjct: 105 GAYQGYAESGDQKQILAIADVILGDYKPDAIILLDISKETSIERRG 150
>gi|220934998|ref|YP_002513897.1| dTMP kinase [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219996308|gb|ACL72910.1| dTMP kinase [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 218
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 94/226 (41%), Gaps = 25/226 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI EG + GK+TQ + L +L +P P G + E +R+
Sbjct: 8 RGRFITLEGAEGVGKSTQIQALQAFLESRGVPLLVTREPG-----GTPLAERIRE----- 57
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
LL S + P L+ E + + + DR++ + A+
Sbjct: 58 -----LLLSRDHPPMHPDTELLLMFAARAEHLRTRILPALEAGTWVLCDRFTDATYAYQG 112
Query: 127 AKEGMDISWCFQPE---KGLPKPDAVLLFKLN-EEALQRRKGFGD-ERYEQ--TDFQRKV 179
G+D + E +G +PD LL ++ L R +G G+ +R+EQ DF +V
Sbjct: 113 GGRGLDPARIAVLEDWVQGPVRPDLTLLLDVDVRTGLARARGRGEADRFEQEAMDFFERV 172
Query: 180 AENY---EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKSQFSP 222
E Y + + + + IDA + ++ + ++ ++ ++ + +P
Sbjct: 173 REAYLARARAEPSRYRIIDAGQSLEAVTRDLQAALVSLLQANGVTP 218
>gi|411120794|ref|ZP_11393166.1| thymidylate kinase [Oscillatoriales cyanobacterium JSC-12]
gi|410709463|gb|EKQ66978.1| thymidylate kinase [Oscillatoriales cyanobacterium JSC-12]
Length = 221
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 102/241 (42%), Gaps = 53/241 (21%)
Query: 7 RGAFIVFEGCDRSGKTTQAKK---------LVDYLNKNNIPSQFVNFPD----------R 47
RG FIVFEG + SGKTTQ ++ ++YL + V + R
Sbjct: 2 RGRFIVFEGGEGSGKTTQLERSRQWLITSGWLEYLQAKDYIRDLVITREPGGTDIGQAIR 61
Query: 48 TISTGHIIDEYLRKKIELPDQAAHLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEK 106
T+ HI E ++ + EL LL++A+R + E L +E G +
Sbjct: 62 TLLLNHISQEPIQDRAEL------LLYAADRAQHVEGFLRPHLEAGALIL---------- 105
Query: 107 NLDQGCTNDRYSFSGVAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEA-LQRR 162
C DRY+ S +A+ G+D++ Q + G + D L L+ +A L R
Sbjct: 106 -----C--DRYTDSTIAYQGYGRGLDLTLIHQLNQIASGGLESDLTLWLDLSAQAGLART 158
Query: 163 KGFGD-ERYEQTD--FQRKVAENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIK 216
+ G +R EQ D F +KV + + +L + IDA + D + ++ +I
Sbjct: 159 QQRGTRDRIEQADLTFHQKVHKGFAQLAQQYPQRIVRIDASQSEDAVAQQLQAALIQAFT 218
Query: 217 K 217
+
Sbjct: 219 R 219
>gi|410582412|ref|ZP_11319518.1| thymidylate kinase [Thermaerobacter subterraneus DSM 13965]
gi|410505232|gb|EKP94741.1| thymidylate kinase [Thermaerobacter subterraneus DSM 13965]
Length = 250
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI EG + SGK+TQA ++D+L IPS+ V P T + + L
Sbjct: 46 RGWFITLEGGEGSGKSTQAAVVMDWLRSRGIPSRLVREPGGTALGERLRELLLDGAGRPV 105
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
A L+F+A R +L+E I+ + L E DRY S +A+
Sbjct: 106 PMAEMLMFAAAR-------AQLVET----VILPALLAGET-----VVCDRYVDSSLAYQG 149
Query: 127 AKEGMDIS--WCFQ--PEKGLPKPDAVLLFKLNEE---ALQRRKGFGDERYEQTDFQRKV 179
A G+ + W +GL PD LLF + A RR G E + T F +V
Sbjct: 150 AGLGLGGTTVWSVNRLATRGL-LPDLTLLFDCPPDVARARLRRPADGIESRD-TGFHHRV 207
Query: 180 AENY---EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKKS 218
+ Y + + + IDA + L+V + V + ++++
Sbjct: 208 RQGYLDLARAEPRRIVVIDATRP----ALVVAEAVREALERT 245
>gi|170755522|ref|YP_001779682.1| thymidylate kinase [Clostridium botulinum B1 str. Okra]
gi|429247008|ref|ZP_19210284.1| thymidylate kinase [Clostridium botulinum CFSAN001628]
gi|169120734|gb|ACA44570.1| putative thymidylate kinase [Clostridium botulinum B1 str. Okra]
gi|428755861|gb|EKX78456.1| thymidylate kinase [Clostridium botulinum CFSAN001628]
Length = 231
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 69/171 (40%), Gaps = 44/171 (25%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ RG IV EG D SGK TQ KKL D L + N + V FP+ + +I YL +
Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60
Query: 64 ELPDQ----AAHLLFSANR-------WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC 112
PD A+ ++ +R WE ++ GI +
Sbjct: 61 RDPDSVNPYASSTFYAVDRFASYKKDWEEF-----YLKGGIVIA---------------- 99
Query: 113 TNDRYSFSGVAFSAAK--------EGMDISWCFQPEK-GLPKPDAVLLFKL 154
DRY+ S + AAK ++ W F+ +K LP PD V+ +
Sbjct: 100 --DRYTTSNMIHQAAKIKDVQAKDNFLNWLWDFEFKKFNLPVPDCVIFLDM 148
>gi|406918509|gb|EKD57053.1| Thymidylate kinase [uncultured bacterium]
Length = 227
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
+G IV +G D SGK TQ LV L K + +FP + ++++YL +
Sbjct: 6 KGKLIVIDGVDGSGKKTQTDILVRRLIKEGYKVEVADFPRYGERSAALVEDYLNGRFGDA 65
Query: 64 -ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+ AA + ++ +R+ + K ++QG +I+ S+ N+ C G
Sbjct: 66 KSVNSYAASIFYAVDRYAASFEIKKWLDQG---KIVISNRYVSANMGHQC--------GK 114
Query: 123 AFSAAKEGMDISWCFQPE---KGLPKPDAVLLF 152
+ +++ + + W E G+PKPD +L
Sbjct: 115 LKTKSEKQIFLKWLNNLEFEIFGIPKPDKNILL 147
>gi|320354474|ref|YP_004195813.1| thymidylate kinase [Desulfobulbus propionicus DSM 2032]
gi|320122976|gb|ADW18522.1| thymidylate kinase [Desulfobulbus propionicus DSM 2032]
Length = 206
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 77/214 (35%), Gaps = 22/214 (10%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G I FEG D +GK+TQ L YL P I Y + P+
Sbjct: 4 GILIAFEGIDGTGKSTQLPLLAAYLRGQGYTVVETREPTDGPYGQQIRLLYRNRHQASPE 63
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
Q L R E + + +G + DRY FS A+ A
Sbjct: 64 QELELFLLDRRQHVEQCIKPALARGAIV-----------------LTDRYYFSTAAYQGA 106
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLF-KLNEEALQRRKGFGDER---YEQTDFQRKVAENY 183
G D + F P+PD VLL + E++ R + E +EQ + KVA +
Sbjct: 107 A-GCDPAAIFARHGFAPEPDLVLLLTQTPSESVTRIRELRGEMLNDFEQQEQLEKVAALF 165
Query: 184 EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
+ + I A + + + +++ V + +
Sbjct: 166 ASFTHDCIVRIHAARTVAEVHASIREAVAQLLAQ 199
>gi|345016544|ref|YP_004818897.1| thymidylate kinase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392940117|ref|ZP_10305761.1| thymidylate kinase [Thermoanaerobacter siderophilus SR4]
gi|344031887|gb|AEM77613.1| Thymidylate kinase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291867|gb|EIW00311.1| thymidylate kinase [Thermoanaerobacter siderophilus SR4]
Length = 203
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI FEG D GKTTQ K L +YL K + P T + D L K +
Sbjct: 2 RGKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLDKNNFIS 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
LL++++R +L+E+ I +LE Q DR+ S +
Sbjct: 62 PVTEMLLYASSR-------AQLVEEKIL-----PALEK----GQIVILDRFVDSSYVYQG 105
Query: 127 AKEGMDISWCFQPEK----GLPKPDAVLLFKLN-EEALQRRKGFGDERYEQT--DFQRKV 179
G+ I + G+ PD + + EEA++RR +R E+ +F +KV
Sbjct: 106 YARGLGIEKVKLVNEIATMGIL-PDVTIYIDITPEEAMKRRGKREADRLEKESWEFHKKV 164
Query: 180 AENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKK 217
E Y KL ++ ID +++ + V +ID +KK
Sbjct: 165 REGYIKLVKEFPKRFVFIDGMQEL----MKVHQDIIDVVKK 201
>gi|116071493|ref|ZP_01468761.1| Thymidylate kinase [Synechococcus sp. BL107]
gi|116065116|gb|EAU70874.1| Thymidylate kinase [Synechococcus sp. BL107]
Length = 209
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 30/223 (13%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI---- 63
G FIV +G D GK+TQ + L +L + + G + + +R+ +
Sbjct: 3 GRFIVLDGIDGCGKSTQIRHLAQWLPASGLMPSTARLVCTREPGGTPLGQSIRELLLHTE 62
Query: 64 --ELPDQAAH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
++P A LL++A+R Q + I + L + L +DR++ S
Sbjct: 63 ADQVPSVTAELLLYAADR-----------AQHVDSVIRPALLRGDWVL-----SDRFAGS 106
Query: 121 GVAFSAAKEGMDISWCFQPEK----GLPKPDAVLLFKLNEEALQRRKGFGDERYEQTD-- 174
+A+ G+D + E GL V L E +LQRR G ++R E
Sbjct: 107 TLAYQGYGRGLDRPLITRLESIATTGLEPDLTVWLMVPVEVSLQRRHGEKEDRIEAEGRA 166
Query: 175 FQRKVAENYEKLKDNI-WIDIDADKDIDTLGLIVKDIVIDTIK 216
F +VA+ + L + W +DA + + L ++ I+ ++++
Sbjct: 167 FLHRVADGFSALAEQRNWCRLDAQQSVSQLSQELEQILRESLQ 209
>gi|427406218|ref|ZP_18896423.1| hypothetical protein HMPREF9161_00783 [Selenomonas sp. F0473]
gi|425709059|gb|EKU72098.1| hypothetical protein HMPREF9161_00783 [Selenomonas sp. F0473]
Length = 228
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 84/221 (38%), Gaps = 45/221 (20%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR---- 60
+ RG + E D SGK TQ + L + L ++ V FPD + ++ YLR
Sbjct: 1 MARGKLFIIEAGDGSGKETQTRLLAERLVRDGHRVVPVAFPDYASDSSALVRMYLRGDFG 60
Query: 61 -KKIELPDQAAHLLFSANR-------WER--EPTLTKLIEQGITLEIMHSSLENEKNLDQ 110
++ AA F+ +R W R E L ++ T ++H +++ +
Sbjct: 61 AHAADVNAYAASTFFAVDRYASYRTKWGRDYEAGAVVLADRYTTSNMVHQAVK----ISD 116
Query: 111 GCTNDRYSFSGVAFSAAKEGMDISWCFQPE---KGLPKPDAVLLFKLNEEALQR------ 161
D Y + W + E GLP PDAV + A QR
Sbjct: 117 AAQRDAY---------------LDWLYDLEFNKMGLPVPDAVFFLDMEPAAAQRLIAARA 161
Query: 162 -RKGFGDERYEQ-TDFQRKVAENYEKLKDNI-WIDIDADKD 199
+ G + +E+ D+ + + Y L + W+ I + D
Sbjct: 162 EKSGAAPDIHERDADYLARTHDAYVLLAERYGWVRIPSSTD 202
>gi|410727937|ref|ZP_11366130.1| thymidylate kinase [Clostridium sp. Maddingley MBC34-26]
gi|410597497|gb|EKQ52108.1| thymidylate kinase [Clostridium sp. Maddingley MBC34-26]
Length = 213
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 92/226 (40%), Gaps = 45/226 (19%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
+G FIVFEG + SGKTT + +++ NN P G I E +R+ I
Sbjct: 3 KGLFIVFEGGEGSGKTTAIDAIYNWITDNNFNCIKTREPG-----GIKISEQIRQVILSK 57
Query: 64 ---ELPDQAAHLLFSANRWER--EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
+ + LL++A R + E + L E I L C DR+
Sbjct: 58 ENNSMDPRTEALLYAAARRQHLVEKVIPALNEGKIVL----------------C--DRFI 99
Query: 119 FSGVAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRKGFGDER------ 169
+S +A+ G+ I K G PD +LF L+ + R D R
Sbjct: 100 YSSLAYQGYARGLGIEEVMSINKFAVGEYMPDISILFDLDPKIGLERINNSDCREINRLD 159
Query: 170 YEQTDFQRKVAEN----YEKLKDNIWIDIDADKDIDTLGLIVKDIV 211
E+ DF +V YE+ KD I I IDA K + + +K+I+
Sbjct: 160 LEKLDFHERVRVGYNIVYEENKDKI-IRIDASKSKENVIEEIKNIL 204
>gi|281490597|ref|YP_003352577.1| thymidylate kinase [Lactococcus lactis subsp. lactis KF147]
gi|161702099|gb|ABX75570.1| Thymidylate kinase [Lactococcus lactis subsp. lactis KF147]
Length = 199
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+ IVFEG D SGKTTQ L + + P + +YL I
Sbjct: 2 KNLLIVFEGLDGSGKTTQIDMLHQWFENKKLEVFTTKQPTDYYRNDKRVRDYLDNGIAPN 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
+ LL +A+R T I I +I S++ DRY +S +AF
Sbjct: 62 MYSIALLAAADR-------TYQISSEIFPKISESNI----------ICDRYLYSSLAFFK 104
Query: 127 AKEGMDISWCFQPEKGLPKPDAVLLFKL-NEEALQR---RKGFGDERYEQTD--FQRKVA 180
A+ G+D KG+P PD + + E AL+R R G D +YE+ + +V
Sbjct: 105 AR-GIDYKEILMINKGVPIPDVTVFLDVPPERALERVRQRDG-EDIKYEEKNELVFNQVR 162
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
+N+ + + +D+ ID + I+ + V + + K
Sbjct: 163 QNFLDVLPKNALIVDSTLGIDKVHQIITNFVSEVMGK 199
>gi|83814827|ref|YP_446793.1| thymidylate kinase [Salinibacter ruber DSM 13855]
gi|83756221|gb|ABC44334.1| thymidylate kinase [Salinibacter ruber DSM 13855]
Length = 221
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 35/210 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
+ FEG D SGK+TQA +L ++L + + V P T + + L + + A
Sbjct: 3 LLTFEGIDGSGKSTQAHRLNEHLQERGHKTLLVREPGGTELSEQVRSVLLEPALNVHPMA 62
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSAA 127
LLFSA R T+L+ + I L+ G DR+ S A+ A
Sbjct: 63 ELLLFSAAR-------TQLVTERI-----------RPALEAGRIVICDRFYDSTTAYQGA 104
Query: 128 KEGM-DISWCFQPEK----GLPKPDAVLLFKLNEEALQRRKGFGD----ERYEQTD--FQ 176
+ D W + GL PD L +L+ E + R+ G+ +R E D F
Sbjct: 105 GRNVADPEWLQSFHRRVTDGL-VPDRTYLVELDPETARARRTEGNDAAGDRMEAEDEAFY 163
Query: 177 RKVAENYEKLKDNIWIDI---DADKDIDTL 203
+VA Y+ L D I D + I+ L
Sbjct: 164 HRVAAAYDTLADEHSARIHRLDGHRSIEAL 193
>gi|338974494|ref|ZP_08629854.1| thymidylate kinase [Bradyrhizobiaceae bacterium SG-6C]
gi|338232367|gb|EGP07497.1| thymidylate kinase [Bradyrhizobiaceae bacterium SG-6C]
Length = 231
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 85/213 (39%), Gaps = 42/213 (19%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST----GHIIDEYLRK 61
PRG FI FEG + SGK+TQ + L D LN + RTI+T G E +R
Sbjct: 12 PRGRFITFEGGEGSGKSTQIQLLADRLNAAKL---------RTITTREPGGSAGAEIVR- 61
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSF 119
HLL S P L+ + H S E L QG DR++
Sbjct: 62 ---------HLLLSGMAKAFGPETESLLFAAARDD--HVSQVIEPALAQGTWVLCDRFTD 110
Query: 120 SGVAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLN-----EEALQRRKGFGDERY- 170
S + +D E+ G KPD ++ + E AL+RR +R+
Sbjct: 111 STRVYQGELGKVDPKLIRAMERVTIGDLKPDLTIILDIPVAVGMERALKRRGSAAPDRFE 170
Query: 171 -EQTDFQRKVAENYEKLKDN-----IWIDIDAD 197
E F K+ + Y K+ ++ +D +AD
Sbjct: 171 GEGVSFHEKLRDAYRKIAESDPQRCALVDANAD 203
>gi|320095385|ref|ZP_08027065.1| thymidylate kinase, partial [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319977690|gb|EFW09353.1| thymidylate kinase [Actinomyces sp. oral taxon 178 str. F0338]
Length = 256
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 78/203 (38%), Gaps = 43/203 (21%)
Query: 2 ASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK 61
+S PRG FI FEG D +GKTTQ + + ++ + P G + LR+
Sbjct: 7 SSMSPRGVFITFEGVDGAGKTTQIRNVREWFEERGFEVVMTCEPG-----GTPLGAELRR 61
Query: 62 KIE-LPD----QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--N 114
++ PD + LL++A+R H + L +G
Sbjct: 62 LVQNGPDDIDPRTEALLYAADR------------------AYHVATVVRPALARGAVVLG 103
Query: 115 DRYSFSGVAFSAAKEGMDI-------SWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGD 167
DRY S +A+ A + + +W + GL P L L E R+
Sbjct: 104 DRYIDSSLAYQGAARSLGVDEIAAMSAWATE---GL-SPRTTFLLDLPPEVGAGRRTDAP 159
Query: 168 ERYEQ--TDFQRKVAENYEKLKD 188
+R E+ DF +V Y +L D
Sbjct: 160 DRMERESADFHERVRREYLRLAD 182
>gi|428315810|ref|YP_007113692.1| thymidylate kinase [Oscillatoria nigro-viridis PCC 7112]
gi|428239490|gb|AFZ05276.1| thymidylate kinase [Oscillatoria nigro-viridis PCC 7112]
Length = 222
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 35/209 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKN---NIPSQFVNFPDRTISTGHIIDEYLRKKI 63
+G IVFEG + +GKTTQ ++L+ +L + +P P T + L++
Sbjct: 2 KGKLIVFEGVEGAGKTTQMQRLIQFLQASCLLRVPLVATREPGGTELGRGLRHLLLKQDS 61
Query: 64 --ELPDQAAHLLFSANRWEREPTLTK--LIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
+ D+A L+++A+R + T K L + I L C DR++
Sbjct: 62 GESVSDRAELLMYAADRAQHVETFLKPELSKGTIVL----------------C--DRFTD 103
Query: 120 SGVAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLN-EEALQRRKGFGD-ERYEQTD 174
S +A+ G++++ Q + G + D L +N EE L R + G+ +R EQ D
Sbjct: 104 STIAYQGYGRGLNLNLIKQLNEIATGGLQSDLTLWLDMNVEEGLARVRARGERDRIEQAD 163
Query: 175 --FQRKVAENYEKLKD---NIWIDIDADK 198
F R V + + +L + + + I+AD+
Sbjct: 164 LKFHRLVQQGFAELAEANKSRIVRINADR 192
>gi|256833407|ref|YP_003162134.1| thymidylate kinase [Jonesia denitrificans DSM 20603]
gi|256686938|gb|ACV09831.1| thymidylate kinase [Jonesia denitrificans DSM 20603]
Length = 221
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 84/220 (38%), Gaps = 32/220 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G F+ FEG D SGKTTQA+ +L+ + G I + L ++
Sbjct: 10 GLFLTFEGGDGSGKTTQARLAAQWLSDTYAHDALLTREPGGTELGQHIRQLLLHGDDMGP 69
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+A LL++A+R +H+ + +L + DRY S +A+
Sbjct: 70 RAEALLYAADRSHH----------------VHTVIRPALSLGRTVVCDRYFDSSIAYQGG 113
Query: 128 KEGM------DIS-WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQT--DFQRK 178
+ D+S W GL PD +L + R+ +R E+ DF
Sbjct: 114 GRTLTPKTIRDLSLWAVD---GL-IPDLTVLIDVPARVGAARREGEPDRLERAGDDFHDT 169
Query: 179 VAENYEKLKDN---IWIDIDADKDIDTLGLIVKDIVIDTI 215
Y L + W+ +D ID + V+ ++D +
Sbjct: 170 THATYRHLAEQEPERWVIVDGIGTIDEVAGRVRAALVDRL 209
>gi|365825478|ref|ZP_09367434.1| thymidylate kinase [Actinomyces graevenitzii C83]
gi|365258217|gb|EHM88231.1| thymidylate kinase [Actinomyces graevenitzii C83]
Length = 220
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 93/231 (40%), Gaps = 35/231 (15%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL----- 59
+ RG FI FEG D GKTTQ + L ++L + + P T + L
Sbjct: 1 MGRGVFISFEGGDGVGKTTQVELLTNWLEDQGVSVRRTREPGATALGAQLRSLLLGTASE 60
Query: 60 -RKKIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
++ ++ +A LLF+A+R + E+++ +L Q DRY
Sbjct: 61 NAQRTQITAKAEALLFAADRAQH------------VNELINPALAA----GQVVVTDRYI 104
Query: 119 FSGVAFSAAK------EGMDIS-WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDE-RY 170
S VA+ A E D+S W +L + + R G D
Sbjct: 105 DSSVAYQGAARCLGATEVRDLSLWATDKLLPDLTLLLDADPQLAAKRVHTRSGQADAIEA 164
Query: 171 EQTDFQRKVAENYEKLKDN----IWIDIDADKDIDTLGLIVKDIVIDTIKK 217
E FQ ++ E + +L + I I IDA +I+ + V+ +V + +K+
Sbjct: 165 EGLQFQYRLREQFHRLAEQESTRIKI-IDASVEIEQIAAQVRALVSELLKE 214
>gi|428298321|ref|YP_007136627.1| thymidylate kinase [Calothrix sp. PCC 6303]
gi|428234865|gb|AFZ00655.1| thymidylate kinase [Calothrix sp. PCC 6303]
Length = 209
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 32/192 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE--- 64
G IVFEG + GKTTQ + ++L + P T G + L +K E
Sbjct: 3 GKLIVFEGVEGCGKTTQMQMTGEWLRSLGVAVVTTREPGGT-ELGVKLRRLLLEKTEGET 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGV 122
+ D+ LL++A+R + H + + NL QG DR+ S +
Sbjct: 62 IADRTELLLYAADRAQ------------------HVEADLKPNLKQGKIILCDRFVDSTI 103
Query: 123 AFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEE-ALQRRKGFGD--ERYEQTD-- 174
A+ G+D+ Q + G + D L F L+ E L+R++ G+ +R EQ +
Sbjct: 104 AYQGYGRGLDMHLIHQLNQIATGGLESDITLWFDLDAEVGLKRKRRSGEIADRIEQEEIT 163
Query: 175 FQRKVAENYEKL 186
F +V + Y ++
Sbjct: 164 FHLRVQQGYAEI 175
>gi|374581645|ref|ZP_09654739.1| thymidylate kinase [Desulfosporosinus youngiae DSM 17734]
gi|374417727|gb|EHQ90162.1| thymidylate kinase [Desulfosporosinus youngiae DSM 17734]
Length = 228
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 73/182 (40%), Gaps = 39/182 (21%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI--- 63
+G IV E D SGK TQ + L D L +N + V FPD + +I YL +
Sbjct: 2 KGKLIVIEAGDGSGKATQTQLLFDKLASSNYRVKKVEFPDYQSDSSALIKMYLNGEFGGD 61
Query: 64 --ELPDQAAHLLFSANRWEREPTLTKLIEQ--GITLEIMHSSLENEKNLDQGCTNDRYSF 119
++ AA ++A+R+ + + Q GI L DRY+
Sbjct: 62 PNDVNPYAASTFYAADRYASYKRVWEGFYQSGGIILA------------------DRYTT 103
Query: 120 SGVAFSAAK-----EGMD-ISWCFQPE---KGLPKPDAVLLFKLNEEALQ-----RRKGF 165
S + AAK E D + W + E LP PD V+ ++ E Q R F
Sbjct: 104 SNMVHQAAKITNLVEREDYLKWLWDLEFVKFRLPVPDCVIFLDMHPEFSQILMSNRSNKF 163
Query: 166 GD 167
GD
Sbjct: 164 GD 165
>gi|164688846|ref|ZP_02212874.1| hypothetical protein CLOBAR_02494 [Clostridium bartlettii DSM
16795]
gi|164602050|gb|EDQ95515.1| dTMP kinase [Clostridium bartlettii DSM 16795]
Length = 224
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 58/156 (37%), Gaps = 19/156 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G I+ EG D SGK TQ KKL D L N + V FP+ + ++ YLR
Sbjct: 2 KGKLIIIEGSDGSGKATQTKKLYDRLEAENYKIKKVEFPNYNSESSALVKMYLRGD---- 57
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
F N + +P + + E N DRY+ S + A
Sbjct: 58 -------FGKNATDVDPYVCSTFYAVDRYASFKTGWEEFYNNGGIIICDRYTTSNMVHQA 110
Query: 127 AK-----EGMDISWCFQPEKGL---PKPDAVLLFKL 154
+K + W E L PKPD V+ +
Sbjct: 111 SKIDESERDKYLDWLNDLEFNLYKIPKPDCVIFLDV 146
>gi|414166864|ref|ZP_11423094.1| thymidylate kinase [Afipia clevelandensis ATCC 49720]
gi|410892142|gb|EKS39937.1| thymidylate kinase [Afipia clevelandensis ATCC 49720]
Length = 231
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 85/213 (39%), Gaps = 42/213 (19%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST----GHIIDEYLRK 61
PRG FI FEG + SGK+TQ + L D LN + RTI+T G E +R
Sbjct: 12 PRGRFITFEGGEGSGKSTQIQLLADRLNAAKL---------RTITTREPGGSAGAEIVR- 61
Query: 62 KIELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSF 119
HLL S P L+ + H S E L QG DR++
Sbjct: 62 ---------HLLLSGMAKAFGPETESLLFAAARDD--HVSQVIEPALAQGTWVLCDRFTD 110
Query: 120 SGVAFSAAKEGMDISWCFQPEK---GLPKPDAVLLFKLN-----EEALQRRKGFGDERY- 170
S + +D E+ G KPD ++ + E AL+RR +R+
Sbjct: 111 STRVYQGELGKVDPKLIRAMERVTIGDLKPDLTIILDVPVAVGMERALKRRGSAAPDRFE 170
Query: 171 -EQTDFQRKVAENYEKLKDN-----IWIDIDAD 197
E F K+ + Y K+ ++ +D +AD
Sbjct: 171 GEGVSFHEKLRDAYRKIAESDPQRCALVDANAD 203
>gi|383788422|ref|YP_005472991.1| thymidylate kinase [Caldisericum exile AZM16c01]
gi|381364059|dbj|BAL80888.1| thymidylate kinase [Caldisericum exile AZM16c01]
Length = 196
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 36/219 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK---KIELP 66
FI FEG D SGKTTQAK L L K P G + Y+RK +E+
Sbjct: 2 FISFEGIDGSGKTTQAKLLKVNLEKLGFNVILTKEPG-----GTELGSYIRKILLNVEMD 56
Query: 67 DQAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
+ LLF+++R + K + +G T +DR+ S VA+
Sbjct: 57 PVSEFLLFASDRKTHVKEVIKPFLSKGFT-----------------VISDRFHDSSVAYQ 99
Query: 126 AAKEGMDISWCFQPEKGLPK---PDAVLLFKLNEE-ALQRRKGFGDERYEQ--TDFQRKV 179
G+ + + + + + P+ +L ++E + +R K +R E+ DF R V
Sbjct: 100 GYGRGVPLDFIYYVHNFILEGIIPNITVLVDIDENLSFERIK--DADRIERLGIDFLRNV 157
Query: 180 AENYEKLKDN--IWIDIDADKDIDTLGLIVKDIVIDTIK 216
+ Y K+ N + ID K ++ L I+ + V++ +K
Sbjct: 158 RKGYLKIAKNEDRFFVIDGSKTVEELEEIILNKVLEKLK 196
>gi|344940570|ref|ZP_08779858.1| Thymidylate kinase [Methylobacter tundripaludum SV96]
gi|344261762|gb|EGW22033.1| Thymidylate kinase [Methylobacter tundripaludum SV96]
Length = 223
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 58/152 (38%), Gaps = 24/152 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE-L 65
RG FI EGC+ GKTT + DYL ++NI P T I L K E +
Sbjct: 3 RGKFITLEGCEGVGKTTNMAFIKDYLEQHNISVVVTREPGGTKLAEKIRQLLLDNKSETI 62
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVA 123
+QA L+ A R + H E L QG DR++ + A
Sbjct: 63 SEQAELLMMFAARAQ------------------HIKHVIEPALAQGKWVLCDRFTDATYA 104
Query: 124 FSAAKEGMDIS---WCFQPEKGLPKPDAVLLF 152
+ M IS W +G +PD LL
Sbjct: 105 YQGGGRNMKISTIKWLENLVQGTLRPDLTLLL 136
>gi|313664899|ref|YP_004046770.1| dTMP kinase [Mycoplasma leachii PG50]
gi|392388527|ref|YP_005906936.1| thymidylate kinase [Mycoplasma leachii 99/014/6]
gi|312949571|gb|ADR24167.1| dTMP kinase [Mycoplasma leachii PG50]
gi|339276172|emb|CBV66751.1| Thymidylate kinase [Mycoplasma leachii 99/014/6]
Length = 213
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 41/229 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI------ 63
FI FEG D SGKTT K+ + L + N P G +I E +R+ I
Sbjct: 2 FITFEGMDGSGKTTALLKVKEELERLNYKVLITREPG-----GEVIAEQIRQIILDNKNK 56
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+ LLF A+R + L K+I+ + EKN+ +DR+ S A
Sbjct: 57 NMDVWTEALLFIASRNQH---LQKVIKPAL-----------EKNI--IVISDRFIDSTSA 100
Query: 124 FSAAKEGMDISWCFQPEKGLPK---PDAVLLFKLN----EEALQRRKGFGDERY--EQTD 174
+ + + + Q ++ + K PD L F ++ E+ +Q R R E+ +
Sbjct: 101 YQGSARNIGVDVVNQVQQIVLKNCLPDLTLFFDVSFSEAEKRMQLRGESSKNRLDEEENN 160
Query: 175 FQRKVAENY-EKLKDN---IWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
F++KV + Y E +K+N I + IDA+KDID + I+++ +K+++
Sbjct: 161 FKQKVYQGYLELIKNNPERIKV-IDANKDIDQVYNQAIKIILEKLKENE 208
>gi|148378062|ref|YP_001252603.1| thymidylate kinase [Clostridium botulinum A str. ATCC 3502]
gi|153932140|ref|YP_001382461.1| thymidylate kinase [Clostridium botulinum A str. ATCC 19397]
gi|153937766|ref|YP_001386013.1| thymidylate kinase [Clostridium botulinum A str. Hall]
gi|148287546|emb|CAL81610.1| thymidylate kinase [Clostridium botulinum A str. ATCC 3502]
gi|152928184|gb|ABS33684.1| putative thymidylate kinase [Clostridium botulinum A str. ATCC
19397]
gi|152933680|gb|ABS39179.1| putative thymidylate kinase [Clostridium botulinum A str. Hall]
Length = 231
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 68/171 (39%), Gaps = 44/171 (25%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ RG IV EG D SGK TQ KKL D L + N + V FP+ + +I YL +
Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60
Query: 64 ELPDQ----AAHLLFSANR-------WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC 112
PD A+ ++ +R WE ++ GI +
Sbjct: 61 RNPDSVNPYASSTFYAVDRFASYKKDWEEF-----YLKGGIIIA---------------- 99
Query: 113 TNDRYSFSGVAFSAAK--------EGMDISWCFQPEK-GLPKPDAVLLFKL 154
DRY+ S + AAK ++ W F+ K LP PD V+ +
Sbjct: 100 --DRYTTSNMIHQAAKIKDVQAKDNFLNWLWDFEFRKFNLPVPDCVIFLDM 148
>gi|435851853|ref|YP_007313439.1| thymidylate kinase [Methanomethylovorans hollandica DSM 15978]
gi|433662483|gb|AGB49909.1| thymidylate kinase [Methanomethylovorans hollandica DSM 15978]
Length = 205
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 82/189 (43%), Gaps = 32/189 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G I EG D SGK+T + L D L F P T G ++ LR
Sbjct: 2 KGKLITLEGIDGSGKSTICRLLQDDLGFEG--CIFTREP-TTSWFGDAVNRALRSD---T 55
Query: 67 DQAAHL-LFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D A L LF A+ + +++LI SLEN N+ +DRYS S A+
Sbjct: 56 DHIAELMLFLADHADH---ISRLI---------RPSLENGDNI----ISDRYSASRCAYQ 99
Query: 126 AAKEGMDI-----SWCFQPEKGLP-KPDAVLLFKLNEEALQRRKGFGDER--YEQTDFQR 177
A DI W KG PD ++LF ++ E +R G ER +E+ +F +
Sbjct: 100 GATL-QDIFEDPLDWVRFLHKGWTIDPDLIILFDIDPEVAVKRCGDRGERSKFEKMEFLK 158
Query: 178 KVAENYEKL 186
KV NY +L
Sbjct: 159 KVRSNYLRL 167
>gi|268323396|emb|CBH36984.1| thymidylate kinase [uncultured archaeon]
Length = 204
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 80/202 (39%), Gaps = 31/202 (15%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
I FEG D SGK TQ+K L L K ++PD G +I +L K+ L
Sbjct: 2 LINFEGIDGSGKRTQSKLLKKELLKKGFKVADFSYPDYDSEYGKLIKGFLEAKLNLSSDE 61
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAFSAA 127
LL+ ++I+ + E + L +G DRY S +A+ +A
Sbjct: 62 QFLLY-------------------LIDIVKNKEEVIQKLRKGHVVIMDRYFLSTIAYQSA 102
Query: 128 KE-GMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR----KGFGDERYEQTDFQRKVAEN 182
+++ LP P + ++ + RR KG D T+F KV
Sbjct: 103 NNFDYEVAKAVTKLIQLPLPSVIFYIEIPLDIASRRKSKQKGIVDRFEGNTEFLTKVVNV 162
Query: 183 YEKL-----KDNIWIDIDADKD 199
YE+L + WI +D +D
Sbjct: 163 YERLIQEQFPSSSWIKLDGTED 184
>gi|342214970|ref|ZP_08707639.1| dTMP kinase [Veillonella sp. oral taxon 780 str. F0422]
gi|341590076|gb|EGS33325.1| dTMP kinase [Veillonella sp. oral taxon 780 str. F0422]
Length = 226
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 68/177 (38%), Gaps = 38/177 (21%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI---- 63
G I+ EG D SGK TQ KL++ L P + V+FP+ I YLR
Sbjct: 2 GQLIIIEGGDGSGKATQTAKLLERLKAEGYPVRSVSFPNYDSPAAEPIKMYLRGDFGKEA 61
Query: 64 -ELPDQAAHLLFSANRWE--REPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
+ A L++ +R+ R+ E GI + DRY+ S
Sbjct: 62 NSVNAYVASTLYAIDRFASYRQDWQRFYEEGGIIIA------------------DRYTTS 103
Query: 121 GVAFSAAK------EGMDISWCFQPE---KGLPKPDAVLL----FKLNEEALQRRKG 164
+ K + W Q E GLP+PDAV+L L++ L R G
Sbjct: 104 NMVHQMIKYTDKKERNTFLQWLDQLEYDLYGLPRPDAVILLDMPLSLSKALLAERTG 160
>gi|153940357|ref|YP_001389419.1| thymidylate kinase [Clostridium botulinum F str. Langeland]
gi|384460512|ref|YP_005673107.1| putative thymidylate kinase [Clostridium botulinum F str. 230613]
gi|152936253|gb|ABS41751.1| putative thymidylate kinase [Clostridium botulinum F str.
Langeland]
gi|295317529|gb|ADF97906.1| putative thymidylate kinase [Clostridium botulinum F str. 230613]
Length = 231
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 68/171 (39%), Gaps = 44/171 (25%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ RG IV EG D SGK TQ KKL D L + N + V FP+ + +I YL +
Sbjct: 1 MQRGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60
Query: 64 ELPDQ----AAHLLFSANR-------WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC 112
PD A+ ++ +R WE ++ GI +
Sbjct: 61 RDPDSVNPYASSTFYAVDRFASYKKDWEEF-----YLKGGIVIA---------------- 99
Query: 113 TNDRYSFSGVAFSAAK--------EGMDISWCFQPEK-GLPKPDAVLLFKL 154
DRY+ S + AAK ++ W F+ K LP PD V+ +
Sbjct: 100 --DRYTTSNMIHQAAKIKDVQAKDNFLNWLWDFEFRKFNLPVPDCVIFLDM 148
>gi|262199023|ref|YP_003270232.1| thymidylate kinase [Haliangium ochraceum DSM 14365]
gi|262082370|gb|ACY18339.1| thymidylate kinase [Haliangium ochraceum DSM 14365]
Length = 210
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 27/190 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG IV EG D SG +TQ + L D + + P T G ++ E L
Sbjct: 5 RGLLIVLEGIDGSGTSTQTRLLCDAFAARGRSTHATHEPS-TGPVGLLLREMLAGAHAPV 63
Query: 67 DQAA-HLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVA 123
DQ LL++A+R + H E E L G +DR+ S +A
Sbjct: 64 DQTTLSLLYAADRAD------------------HVQREVEPALAAGKLVVSDRWYHSSLA 105
Query: 124 FSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRK---GFGDERYEQTDFQRKVA 180
+ A D W + PD + ++ E RR+ G +E +++ + Q++VA
Sbjct: 106 YQGAGGTRD--WVAALNRYARAPDLTIFLEVAAEIAARRRADDGRSEEIFDRLEIQQRVA 163
Query: 181 ENYEKLKDNI 190
+Y ++ D++
Sbjct: 164 ADYREVIDSL 173
>gi|359410031|ref|ZP_09202496.1| Thymidylate kinase [Clostridium sp. DL-VIII]
gi|357168915|gb|EHI97089.1| Thymidylate kinase [Clostridium sp. DL-VIII]
Length = 213
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FIVFEG + +GKTT ++ +++ NN+ P + I L K+ L D
Sbjct: 4 GLFIVFEGGEGTGKTTAIDEIYNWIISNNLKCIKTREPGGIKISEQIRQVILSKENNLMD 63
Query: 68 -QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAF 124
+ LL++A R R+ + K+I LD+G DR+ S +A+
Sbjct: 64 GRTEALLYAAAR--RQHLVEKVIPA----------------LDEGIIVLCDRFIDSSLAY 105
Query: 125 SAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRKGFGDER------YEQTDF 175
+ I K G PD +LF L+ + R D R E+ DF
Sbjct: 106 QGYARNLGIDEVMSINKFAIGKYMPDISILFDLDPKIGLDRINSNDSREINRLDLEKLDF 165
Query: 176 QRKVAENYEKLKDN 189
KV E Y + +N
Sbjct: 166 HEKVREGYNIIYEN 179
>gi|15897682|ref|NP_342287.1| thymidylate kinase (tmK-1) [Sulfolobus solfataricus P2]
gi|227830328|ref|YP_002832108.1| dTMP kinase [Sulfolobus islandicus L.S.2.15]
gi|229579145|ref|YP_002837543.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14]
gi|229582100|ref|YP_002840499.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51]
gi|284997753|ref|YP_003419520.1| dTMP kinase [Sulfolobus islandicus L.D.8.5]
gi|11133144|sp|Q9UXG7.1|KTHY1_SULSO RecName: Full=Probable thymidylate kinase 1; AltName: Full=dTMP
kinase 1
gi|6015696|emb|CAB57523.1| thymidylate kinase [Sulfolobus solfataricus P2]
gi|13813955|gb|AAK41077.1| Thymidylate kinase (tmK-1) [Sulfolobus solfataricus P2]
gi|227456776|gb|ACP35463.1| dTMP kinase [Sulfolobus islandicus L.S.2.15]
gi|228009859|gb|ACP45621.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14]
gi|228012816|gb|ACP48577.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51]
gi|284445648|gb|ADB87150.1| dTMP kinase [Sulfolobus islandicus L.D.8.5]
Length = 189
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 81/196 (41%), Gaps = 33/196 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLN---KNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
I EG D SGKTT A L ++L K N+ F + I L +KI
Sbjct: 4 LIAIEGIDGSGKTTLANLLKEHLESKMKLNVIVTREPFSEDIIK--------LIEKIGWN 55
Query: 67 DQAAH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
D LLF+A+R EI + L K+ D DRY FS +A+
Sbjct: 56 DPILLVLLFAADR-----------------EIHVNWLSKIKDADL-IILDRYYFSSIAYQ 97
Query: 126 AAKEGMDISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTDFQRKVAENYE 184
A G+D W PKPD V+L L E A+ R K E+ KV E Y
Sbjct: 98 GAL-GVDEQWIKMVNSYFPKPDMVILLDLPIEVAISRIKNDKFNFEEKIKSLAKVREKYL 156
Query: 185 KL-KDNIWIDIDADKD 199
KL K+ + +DA KD
Sbjct: 157 KLAKEYNFYVVDASKD 172
>gi|325967673|ref|YP_004243865.1| thymidylate kinase [Vulcanisaeta moutnovskia 768-28]
gi|323706876|gb|ADY00363.1| thymidylate kinase [Vulcanisaeta moutnovskia 768-28]
Length = 199
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 38/221 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
F+ EG D GK+T L L N P ++ G +I ++L K A
Sbjct: 2 FVAVEGIDGVGKSTVISMLRKKLESNGYRVYTTAEPSQS-PIGRLIRDWLLKP---SSNA 57
Query: 70 AH-----LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGV 122
AH LLF+A+R + H E + LD G +RY S +
Sbjct: 58 AHPSIFALLFTADR------------------VQHYYGEVKPKLDSGYLVITERYMESTL 99
Query: 123 AFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEA----LQRRKGFGDERYE-QTDFQR 177
A+ A G+ W + + +P+PD ++ E L R+ E +E +F
Sbjct: 100 AYQGAM-GLPQEWLMELHRFVPRPDLTIILDAPIETVIGRLSNRREL--EVFEVNKEFLS 156
Query: 178 KVAENY-EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
KV E + N + I+AD+D++++ + +++ID +++
Sbjct: 157 KVREFLLRRASTNNYPVINADRDLESIVNDIYELIIDALRR 197
>gi|210630412|ref|ZP_03296447.1| hypothetical protein COLSTE_00331 [Collinsella stercoris DSM 13279]
gi|210160494|gb|EEA91465.1| dTMP kinase [Collinsella stercoris DSM 13279]
Length = 225
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 39/237 (16%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ +G FI EG D GK+TQA + L+ + P G I E +R +
Sbjct: 1 MTKGHFITVEGIDGVGKSTQAALMEVLLDSAGYDVLRLREP-----GGVSISEQIRAVLL 55
Query: 64 -----ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
E+ D LL+ A R +L+ Q ++ +L K + DR+
Sbjct: 56 DPANDEMGDMCELLLYEAAR-------AQLVHQ-----VIRPALTAGKTV----ICDRFY 99
Query: 119 FSGVAFSAAKEGMDISWCFQPEKGLP---KPDAVLLFKLNEEALQRRKG--FGDERYE-- 171
S A+ + +G+D FQ + +PD L+F L E RR+ ++R E
Sbjct: 100 DSTTAYQSFADGLDRDMVFQANELAVDGCRPDLTLVFDLPVEDAHRRRSDRSAEDRLELK 159
Query: 172 QTDFQRKVAENYEKLKDNIWIDIDADKDIDTLGLI--VKDIVIDTIKKSQFSPLESN 226
DFQ++V+E + + + + D + +D G I V IV+D ++ + +S+
Sbjct: 160 GRDFQQRVSEGFRAVAAD---EPDRVRLVDAGGSIAEVFSIVVDELRAAGMDVSDSD 213
>gi|404216209|ref|YP_006670404.1| Thymidylate kinase [Gordonia sp. KTR9]
gi|403647008|gb|AFR50248.1| Thymidylate kinase [Gordonia sp. KTR9]
Length = 217
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 38/206 (18%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS-TGHIIDEYLR-KKIEL 65
G I EG D +GK T L+D + + FP S T I E L +L
Sbjct: 2 GHLIAVEGLDGAGKNTLVTGLIDRWSTARLRVATFTFPRYGRSATADIAAEALHGSHGDL 61
Query: 66 PDQ--AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
D A LLF+ +R G +I ++ ++ DRY S A
Sbjct: 62 RDSVYAMALLFALDR------------AGAADDIRAATETHDI-----VILDRYVASNAA 104
Query: 124 FSAAKEGMD-----ISWCFQPE---KGLPKPDAVLLFKLNEEALQRRKGFGDER------ 169
++AA+ G D + W E G+P PD +L ++ E R E+
Sbjct: 105 YNAARLGQDAGGEVVRWVVDLEFGRFGMPVPDRQVLLGVSPEVAMSRAAARAEQDATRAR 164
Query: 170 --YEQTD-FQRKVAENYEKLKDNIWI 192
YE+ D QR+V Y +L D+ W+
Sbjct: 165 DAYERDDALQRRVDAVYRELADSAWM 190
>gi|402304211|ref|ZP_10823286.1| dTMP kinase [Selenomonas sp. FOBRC9]
gi|400375284|gb|EJP28190.1| dTMP kinase [Selenomonas sp. FOBRC9]
Length = 229
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 65/172 (37%), Gaps = 32/172 (18%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ +G + E D SGK TQ + L + L ++ + FPD + ++ YLR
Sbjct: 1 MAKGKLFIIEAGDGSGKETQTRLLAERLERDGHSVLPITFPDYAADSSMLVRMYLRGDFG 60
Query: 64 ----ELPDQAAHLLFSANRWEREPT-LTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
++ AA F+ +R+ T + E G + DRY+
Sbjct: 61 THADDVNAYAASTFFAVDRYASYRTKWGRDYETGAVI-----------------LADRYT 103
Query: 119 FSGVAFSAAKEGMD------ISWCFQPE---KGLPKPDAVLLFKLNEEALQR 161
S + A K D + W + E GLP PDAV + A QR
Sbjct: 104 TSNMVHQAVKIRGDAERDAFLDWLYDLEFRKMGLPVPDAVFFLDMEPAAAQR 155
>gi|168705271|ref|ZP_02737548.1| thymidylate kinase [Gemmata obscuriglobus UQM 2246]
Length = 216
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 97/234 (41%), Gaps = 48/234 (20%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+PR AF+ +G D +GK+TQ + LV++L +P P G + + LRK +
Sbjct: 1 MPRPAFLSLDGLDGTGKSTQCRLLVEWLVAQGVPVTACTDPG-----GTPLGQELRKLLL 55
Query: 64 -----ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
+ + LLF A+R +L+E E++ +L + + +DR+
Sbjct: 56 FGREHRIGTRTEALLFMASR-------AQLVE-----EVIRPALARGEVV----VSDRFL 99
Query: 119 FSGVAFSAAKEGMDISWCFQ----PEKGLPK--PDAVLLFKLNEEALQRRKGFGDERYE- 171
+ V + G+ +Q G + PD L+ L E R+ +R E
Sbjct: 100 LANVVYQGHAGGLSPEELWQVGTFATGGAERLEPDLTLVLDLPPEIAAVRRNREADRMEA 159
Query: 172 ---------QTDFQRKVAENYEKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
+ F+ +VA E+L+ +DA ++D + I++ V ++
Sbjct: 160 RGADYAERVRAGFRSEVARRTERLR-----LVDATANVDGVQKIIRGEVAGLLR 208
>gi|384491152|gb|EIE82348.1| hypothetical protein RO3G_07053 [Rhizopus delemar RA 99-880]
Length = 46
Score = 45.4 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFP 45
RG IV EGCDR+GK+TQ ++LV+ L + + + FP
Sbjct: 3 RGLMIVIEGCDRAGKSTQCERLVNQLRQKGTAVELLKFP 41
>gi|392426355|ref|YP_006467349.1| thymidylate kinase [Desulfosporosinus acidiphilus SJ4]
gi|391356318|gb|AFM42017.1| thymidylate kinase [Desulfosporosinus acidiphilus SJ4]
Length = 225
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 71/183 (38%), Gaps = 39/183 (21%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-----RK 61
+G IV E D SGK TQ K L D LN + + + FPD + +I YL R
Sbjct: 2 KGKLIVIEAGDGSGKATQTKLLFDRLNAESYNIKKIEFPDYESDSSALIKMYLKGEFGRN 61
Query: 62 KIELPDQAAHLLFSANRWE--REPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSF 119
++ AA +S +R+ ++ + GI L DRY+
Sbjct: 62 PADVNPYAASTFYSVDRYASYKKEWEDFYLSGGIILA------------------DRYTT 103
Query: 120 SGVAFSAAK------EGMDISWC--FQPEK-GLPKPDAVLLFKLNEEALQ-----RRKGF 165
S + AAK + W + EK LP PD V+ +N Q R F
Sbjct: 104 SNMVHQAAKISDEEERKAYLRWLSDLEFEKFKLPVPDCVIFLDMNPHFSQKLIKNRENKF 163
Query: 166 GDE 168
GD+
Sbjct: 164 GDK 166
>gi|403743520|ref|ZP_10953104.1| thymidylate kinase [Alicyclobacillus hesperidum URH17-3-68]
gi|403122764|gb|EJY56963.1| thymidylate kinase [Alicyclobacillus hesperidum URH17-3-68]
Length = 216
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 29/193 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR--KKIE 64
RG FI FEG D +GKTTQ ++L +L + + P T G + L + E
Sbjct: 5 RGTFITFEGIDGAGKTTQIQRLATWLEEQGLRVVCTREPGGT-RIGDAVRSVLLNPRHTE 63
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
+ + LL++A+R +L++Q ++ +LE + DR+ + +A+
Sbjct: 64 MAARTEVLLYAASR-------AQLVDQ-----VIRPALEEGAVV----LCDRFVDASIAY 107
Query: 125 SAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLN----EEALQRRKGFGD-ERYEQ--TD 174
A G+ + G PD L F ++ E L +G G +R EQ D
Sbjct: 108 QGAGLGIGEEAVRAVNAFALGNLMPDLTLWFDIDWVQARERLLAARGLGSLDRIEQRGAD 167
Query: 175 FQRKVAENYEKLK 187
F +VA + L+
Sbjct: 168 FFDRVASAFRALQ 180
>gi|347449896|gb|AEO93937.1| gp694 [Bacillus phage G]
Length = 240
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 91/228 (39%), Gaps = 45/228 (19%)
Query: 13 FEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI----ELPDQ 68
FEG D S K TQ L+ YL K V+FP+ G +I YLR + ++P +
Sbjct: 24 FEGLDGSSKETQTNNLISYLEKEGYKVLKVDFPNYDSPIGEVISSYLRGEFGKLEDVPLK 83
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
+++S++R T+ I+ G +RY++S + +A
Sbjct: 84 LISMVYSSDRARYANTIENHIKNGGV-----------------VIANRYTYSNLFHAAKM 126
Query: 129 EGMD----ISW----------CFQPEKGLP-KPDAVLLFKLNEEALQRRKGFGDERYEQT 173
E + I W FQP+ D + K EE +R G E +
Sbjct: 127 EKEERTEFIDWIEEIEFNEMKVFQPDYNFYLYVDPTISLKRIEERGKRGYQEGKEDIHEN 186
Query: 174 DFQRKV--AENY---EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
+ + + AE Y K +DN W+ ID K L + D+V + IK
Sbjct: 187 NSKLLIDTAETYLDFAKSRDN-WVIIDQMKKGKQLPI---DVVFEMIK 230
>gi|325283899|ref|YP_004256440.1| Thymidylate kinase [Deinococcus proteolyticus MRP]
gi|324315708|gb|ADY26823.1| Thymidylate kinase [Deinococcus proteolyticus MRP]
Length = 211
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 28/205 (13%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI FEG + +GK+TQ +L L +P P T + I L +++ A
Sbjct: 8 FITFEGGEGAGKSTQLARLAARLEAAGVPHLLTKEPGGTAAGDQIRATLLDPALDIDPLA 67
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
LL+SA+R + + E++ +LE + + DRY+ S +A+
Sbjct: 68 EFLLYSASRAQ------------LVREVLQPALERGELV----VCDRYADSTLAYQGYGR 111
Query: 130 GMDISW----CFQPEKGLPKPDAVLLFKLNEEALQR--RKGFGDERYEQT--DFQRKVAE 181
G+ + + + GL VLL L R ++G D R E+ DF R++
Sbjct: 112 GLPLPFLQAVTAEATGGLTPALTVLLDLDPAVGLARVAQRGQAD-RLERADLDFHRRLRA 170
Query: 182 NYEKLKDNI---WIDIDADKDIDTL 203
+ L + W+ +DA + D L
Sbjct: 171 GFLALAEQQPQRWLVLDAGRSADEL 195
>gi|168181169|ref|ZP_02615833.1| putative thymidylate kinase [Clostridium botulinum NCTC 2916]
gi|387816286|ref|YP_005676630.1| thymidylate kinase [Clostridium botulinum H04402 065]
gi|421833615|ref|ZP_16268862.1| thymidylate kinase [Clostridium botulinum CFSAN001627]
gi|182667987|gb|EDT79966.1| putative thymidylate kinase [Clostridium botulinum NCTC 2916]
gi|322804327|emb|CBZ01877.1| thymidylate kinase [Clostridium botulinum H04402 065]
gi|409745157|gb|EKN43452.1| thymidylate kinase [Clostridium botulinum CFSAN001627]
Length = 231
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 68/171 (39%), Gaps = 44/171 (25%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ RG IV EG D SGK TQ KKL D L + N + V FP+ + +I YL +
Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60
Query: 64 ELPDQ----AAHLLFSANR-------WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC 112
PD A+ ++ +R WE ++ GI +
Sbjct: 61 RDPDSVNPYASSTFYAVDRFASYKKDWEEF-----YLKGGIIIA---------------- 99
Query: 113 TNDRYSFSGVAFSAAK--------EGMDISWCFQPEK-GLPKPDAVLLFKL 154
DRY+ S + AAK ++ W F+ K LP PD V+ +
Sbjct: 100 --DRYTTSNMIHQAAKIKDVQAKDNFLNWLWDFEFRKFNLPVPDCVIFLDM 148
>gi|326389200|ref|ZP_08210768.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200]
gi|325994563|gb|EGD52987.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200]
Length = 203
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI FEG D GKTTQ K L +YL K + P T + D L K +
Sbjct: 2 RGKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLDKNNFIS 61
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
LL++++R +L+E+ I +LE Q DR+ S +
Sbjct: 62 PVTEMLLYASSR-------AQLVEEKIL-----PALEK----GQIVILDRFVDSSYVYQG 105
Query: 127 AKEGMDISWCFQPEK----GLPKPDAVLLFKLN-EEALQRRKGFGDERYEQTD--FQRKV 179
G+ I + G+ PD + + EEA++RR +R E+ F +KV
Sbjct: 106 YARGLGIEKVKLVNEIATMGIL-PDVTIYIDITPEEAMKRRGKREADRLEKESWGFHKKV 164
Query: 180 AENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKK 217
E Y KL ++ ID +++ + V +ID +KK
Sbjct: 165 REGYIKLVKEFPKRFVFIDGMQEL----MKVHQDIIDVVKK 201
>gi|297616259|ref|YP_003701418.1| thymidylate kinase [Syntrophothermus lipocalidus DSM 12680]
gi|297144096|gb|ADI00853.1| thymidylate kinase [Syntrophothermus lipocalidus DSM 12680]
Length = 223
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 91/223 (40%), Gaps = 28/223 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKIEL 65
R FI FEG D +GKTTQ + L L V P T + I + L + ++
Sbjct: 3 RKCFISFEGIDGAGKTTQVELLYRKLMDVGFSVVAVREPGSTPLSEKIRELLLDVRNQDI 62
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
A L++A R + + EI+ +L+ K + DRY S +A+
Sbjct: 63 SSSAESFLYAAARSQ------------LVAEIIKPALDAGKVV----IADRYVDSTIAYQ 106
Query: 126 AAKEGMDISWC----FQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ--TDFQRKV 179
GMDI + GL +LL EE + RR +R E+ F R V
Sbjct: 107 GYGRGMDIEFLKRLNLLATGGLMPCLTILLDLPPEEGIARRGELPLDRLEREGIGFHRAV 166
Query: 180 AENYEKLK----DNIWIDIDADKDIDTLGLIVKDIVIDTIKKS 218
E Y L D I + +DA ++ + + V++ +++S
Sbjct: 167 REGYLTLSRSEPDRIMV-VDARLQVEDVHEQILKRVLERLRRS 208
>gi|254796905|ref|YP_003081742.1| thymidylate kinase [Neorickettsia risticii str. Illinois]
gi|254590141|gb|ACT69503.1| thymidylate kinase [Neorickettsia risticii str. Illinois]
Length = 199
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 73/187 (39%), Gaps = 38/187 (20%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI---ELP 66
FIVFEG D SGK+TQ K L +L KN P P G E LR I +
Sbjct: 2 FIVFEGIDGSGKSTQVKLLSKFLAKNGYPCVLTREPG-----GTPFAESLRSMILHDSID 56
Query: 67 DQAAHLLFSANRWER--EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
A LL R + + L L E I + C DR+ +S +A+
Sbjct: 57 PMARLLLIVGARVDHYNKVILPALKEGKIVV----------------C--DRFIYSTLAY 98
Query: 125 SAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEEALQRRKGFGDERYEQT--DFQRKV 179
E +D+ K L +PD LL + RK G + +E+ ++ V
Sbjct: 99 QGYGEKIDLQTILDLHKLSGCLVEPDLTLLL-----SGSGRKKLGRDNFERMPREYLSNV 153
Query: 180 AENYEKL 186
YEK+
Sbjct: 154 CMGYEKI 160
>gi|403730678|ref|ZP_10949106.1| thymidylate kinase [Gordonia rhizosphera NBRC 16068]
gi|403202419|dbj|GAB93437.1| thymidylate kinase [Gordonia rhizosphera NBRC 16068]
Length = 211
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 68/163 (41%), Gaps = 31/163 (19%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFP--DRTISTGHIIDEYLR-KKIE 64
G I EG D +GK T LVD+ +N + V FP R++ T + E L + +
Sbjct: 2 GQLIAVEGLDGAGKNTLVTALVDHWRRNGMRVWTVTFPRYGRSV-TADLASEALHGRHGD 60
Query: 65 LPDQ--AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
L D A LLF+ +R EI + N+ L DRY S
Sbjct: 61 LRDSVYAMALLFALDR------------ADAVDEIREALAANDIVL-----LDRYVASNA 103
Query: 123 AFSAAKEGMD-----ISWCFQPEK---GLPKPDAVLLFKLNEE 157
A+SAA+ G D + W + E GLP PD +L + E
Sbjct: 104 AYSAARLGQDAGGEMVRWVTELEYGRFGLPVPDRHVLLGVPAE 146
>gi|33860690|ref|NP_892251.1| thymidylate kinase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|46576452|sp|Q7V3E6.1|KTHY_PROMP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|33633632|emb|CAE18589.1| Thymidylate kinase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 214
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST----GHIIDEYLRKK 62
RG FIV EG D GKTTQ +D ++K S + + + T G ++ + +R
Sbjct: 2 RGKFIVIEGIDGCGKTTQ----IDEISKWIPTSGLLRGKQKLVKTREPGGSLLGKKIRNL 57
Query: 63 I------ELPDQAAH-LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTND 115
I P A LL+SA+R E ++K I +LEN+ +D
Sbjct: 58 ILDNHKDNKPSSLAELLLYSADRAEH---ISKTI---------SPALENQ----DWVLSD 101
Query: 116 RYSFSGVAFSAAKEGMDISWCFQPEKGLPK---PDAVLLFKLN-EEALQRRKGFGDERYE 171
R+ S +A+ +++ E + + PD + +++ EE++ RR+ F +R E
Sbjct: 102 RFCDSTLAYQGYGRNINLEIIKNIESIVCQGESPDLTIFLEISAEESVLRREKFIPDRME 161
Query: 172 Q--TDFQRKVAENYEKL-KDNIWIDIDADKDIDTLGLIVKDIVI 212
F KV E ++ + K+ W I A +DI+T+ +K+ ++
Sbjct: 162 SEGIKFLEKVNEGFKLIAKEKNWTTISALQDINTITNEIKETLL 205
>gi|297566850|ref|YP_003685822.1| thymidylate kinase [Meiothermus silvanus DSM 9946]
gi|296851299|gb|ADH64314.1| thymidylate kinase [Meiothermus silvanus DSM 9946]
Length = 202
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 20/183 (10%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FI FEG + +GK+TQ K L +L P G + + +
Sbjct: 3 GWFITFEGPEGAGKSTQVKLLAPWLEAQGREVVLTREPGNGGWLGVEVRRLVLLSEPMSP 62
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+A +LL+SA+R E ++ +L K + DRY S +A+
Sbjct: 63 EAEYLLYSADRAEH------------VRRVIAPALAAGKVV----LCDRYLDSSLAYQGY 106
Query: 128 KEGMDISWCFQPEKGLP---KPDAVLLFKLNEE-ALQRRKGFGDERYEQTDFQRKVAENY 183
G+D+ W G+ KP L L E L R G E +F ++V Y
Sbjct: 107 GRGLDLGWLRAVAVGVTQGLKPHRTFLLDLPPEVGLARFAGRDRLEREPLEFHQRVRAGY 166
Query: 184 EKL 186
+L
Sbjct: 167 LEL 169
>gi|154508479|ref|ZP_02044121.1| hypothetical protein ACTODO_00979 [Actinomyces odontolyticus ATCC
17982]
gi|153798113|gb|EDN80533.1| dTMP kinase [Actinomyces odontolyticus ATCC 17982]
Length = 270
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 37/239 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI FEG D SGK+TQ + + D+ P T G I ++ E
Sbjct: 4 RGVFITFEGGDGSGKSTQIQSVRDWFESRGREVIVTREPGGT-ELGTEIRRLVQNGPEDV 62
Query: 67 D-QAAHLLFSANR-WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
D + LL++A+R + + +E+G + DRY S +A+
Sbjct: 63 DARTEALLYAADRAYHVATVIAPALERGAVV-----------------LADRYIDSSLAY 105
Query: 125 SAAKEGMDI----SWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ--TDFQRK 178
A + + S +GL P L L E RR+ +R E+ DF +
Sbjct: 106 QGAARSLGVDEIGSLSAWATRGL-YPSLTFLLDLPPEVGARRRTDAPDRMERESMDFHER 164
Query: 179 VAENYEKLKD---NIWIDIDADKDIDTLGLIVKDIVID-------TIKKSQFSPLESNK 227
V Y +L D + + IDA +D + ++ ++++ TI ++ +PL + +
Sbjct: 165 VRHEYLRLADAEPDRIVVIDAVGTVDEVFSEIRGVLVERFEGGSVTIDEADDAPLSAQE 223
>gi|428209757|ref|YP_007094110.1| thymidylate kinase [Chroococcidiopsis thermalis PCC 7203]
gi|428011678|gb|AFY90241.1| thymidylate kinase [Chroococcidiopsis thermalis PCC 7203]
Length = 220
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNK---NNIPSQFVNF---PDRTISTGHIIDEYLRK 61
G IVFEG + SGKTTQ + +L + + IP + V P T + L
Sbjct: 5 GKLIVFEGVEGSGKTTQIQATQSWLQELFSSAIPKRDVIVTREPGGTQLGAELRSLLLES 64
Query: 62 KIELP--DQAAHLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
+ E P LL++A+R + E TL I G + C DRY+
Sbjct: 65 RGEAPILSTTELLLYAADRAQHVEETLKVAIASGTIIL---------------C--DRYT 107
Query: 119 FSGVAFSAAKEGMDISWCFQ----PEKGLPKPDAVLLFKLN-EEALQRRKGFG-DERYEQ 172
S +A+ G+D++ Q GL + D + L+ E L R KG G ++R EQ
Sbjct: 108 DSTIAYQGYGRGLDLNLIHQLNAIATAGL-ESDLTIWLDLDVEVGLSRTKGRGSNDRIEQ 166
Query: 173 --TDFQRKVAENYEKL 186
F R+V + Y +L
Sbjct: 167 EAIAFHRRVQQGYLEL 182
>gi|329946277|ref|ZP_08293871.1| dTMP kinase [Actinomyces sp. oral taxon 170 str. F0386]
gi|328527569|gb|EGF54564.1| dTMP kinase [Actinomyces sp. oral taxon 170 str. F0386]
Length = 253
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 92/226 (40%), Gaps = 39/226 (17%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FI FEG D GKTTQ + L D L ++ P T G I L +
Sbjct: 12 GLFISFEGGDGVGKTTQIRILADLLTAADVDHVLTREPGGT-GLGLEIRRLLLHGGYVAP 70
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRYSFSGVAFS 125
+A LL++A+R H + L++G DRY S VA+
Sbjct: 71 RAEALLYAADRAH------------------HIATRVRPALERGAVVLADRYLDSSVAYQ 112
Query: 126 AAKEGM------DIS-WCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFG-DERYEQ--TD 174
A + D+S W + GL PD +L + + A QR G G +R EQ
Sbjct: 113 GAARSLGPQEVRDLSLWATE---GL-LPDLTILLDGDPDLAEQRATGRGAKDRLEQEGGT 168
Query: 175 FQRKVAENYEKLKD---NIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
F+ + + L + ++ IDAD+ +D + V ++ +++
Sbjct: 169 FRTSLRRQFLALAEAEPGRFVVIDADRSVDQVADDVIGAAVEAVRR 214
>gi|452965835|gb|EME70853.1| thymidylate kinase [Magnetospirillum sp. SO-1]
Length = 213
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 41/194 (21%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI FEG + +GK+TQ + L D L + V + STG E +R +
Sbjct: 6 RGRFITFEGGEGAGKSTQVRLLADSLRDEGL--MVVTTREPGGSTG---AEVIRALLVEG 60
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEK-------NLDQGC--TNDRY 117
D NRW+ G+T ++H + + L++G +DR+
Sbjct: 61 DT--------NRWD-----------GVTEALLHFAARRDHLVKTVWPALERGAWVISDRF 101
Query: 118 SFSGVAFSAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLN-EEALQR--RKGFGDERYE 171
+ S +A+ G+D I+ ++ G PD L+ L E+ L+R +G ++RYE
Sbjct: 102 ADSTLAYQGFGHGLDPEVIASLYRVAVGHFAPDLTLVLDLPVEKGLERAGARGGAEDRYE 161
Query: 172 QT--DFQRKVAENY 183
+ F +++ + +
Sbjct: 162 RMGLGFHQRLRQGF 175
>gi|407802541|ref|ZP_11149382.1| thymidylate kinase [Alcanivorax sp. W11-5]
gi|407023696|gb|EKE35442.1| thymidylate kinase [Alcanivorax sp. W11-5]
Length = 217
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE-- 64
RG FI FEG + +GK++ + L N I P T I D LR + E
Sbjct: 5 RGCFITFEGVEGAGKSSNLAWTAELLRANQIEVLITREPGGTPFAEAIRDLLLRDQPEPV 64
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
P L+F+A R + ++IE + + DR++ + A+
Sbjct: 65 APATELLLIFAA----RAQHIAQVIEPALA-------------AGKWVLCDRFTDATYAY 107
Query: 125 SAAKEGM---DISWCFQPEKGLPKPDAVLLFKLN-EEALQR--RKGFGD--ERYEQTDFQ 176
G+ I+ Q +G +PD LLF L E L+R ++G D ER EQ F+
Sbjct: 108 QGGGRGLPQAHIATLEQLVQGALRPDRTLLFDLPVAEGLRRAGKRGALDRFEREEQAFFE 167
Query: 177 RKVAENY---EKLKDNIWIDIDADKDIDTLGLIVKDIVIDTIK 216
R + E+Y ++ + + IDA +D + V+ ++ D ++
Sbjct: 168 R-IREHYLARQQAEPARFSLIDAAAPLDEVRERVQQVIDDIVR 209
>gi|407785842|ref|ZP_11132989.1| thymidylate kinase [Celeribacter baekdonensis B30]
gi|407202792|gb|EKE72782.1| thymidylate kinase [Celeribacter baekdonensis B30]
Length = 211
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 90/227 (39%), Gaps = 28/227 (12%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI FEG D SGK+TQA+ L + L P + I +A
Sbjct: 2 FISFEGIDGSGKSTQARLLAETLRAAGFDVIHTREPGGSKGAEEI-------------RA 48
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
L +RW E + L+ + M ++ N Q DR++ S F
Sbjct: 49 LVLEGDPDRWSAETEI--LLFTAARRDHMEKTILPALNAGQVVICDRFADSTRVFQGVTR 106
Query: 130 G---MDISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKG--FGDERYEQ--TDFQRKVAE 181
G ++ G+ +PD LLF ++ L R KG +ER+E DFQ K
Sbjct: 107 GDLQAKVNRLHDEMIGI-EPDMTLLFDMDPALGLARAKGRQTVEERFEDFGQDFQEKCRA 165
Query: 182 NYEKLKDNI--WIDIDADKDIDTLGLIVKDIVIDTIKKSQFSPLESN 226
+ L + IDA +DID + V D+V T + S +P ++
Sbjct: 166 AFLALAQTYPRFTVIDAGRDIDVVAREVADLV--TTRLSAGTPQQAQ 210
>gi|356927902|gb|AET42692.1| thymidylate kinase [Emiliania huxleyi virus 202]
Length = 326
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 21/127 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI-EL 65
+G V EG D +GK +Q L+ L + + P + ++FP + G +I E L K +L
Sbjct: 105 KGRIFVIEGGDGAGKMSQTALLMQRLEREDFPVKTIDFPHNESNHGMLIREVLAGKYGDL 164
Query: 66 PDQAAHL---LFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+ L L++ NRW + L I +G + + DRY S +
Sbjct: 165 KNIDPFLLASLYAQNRWSVKHILDFWISRGYNIIL-----------------DRYIISNI 207
Query: 123 AFSAAKE 129
A+ A E
Sbjct: 208 AYQGAHE 214
>gi|333895935|ref|YP_004469809.1| thymidylate kinase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111200|gb|AEF16137.1| Thymidylate kinase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 205
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 89/222 (40%), Gaps = 32/222 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
+G I FEG D SGKTTQ L YL + + P T I + L KK +
Sbjct: 3 KGKLITFEGIDGSGKTTQINLLKKYLLEIGRDIVVLREPGGTAIGEKIREILLDKKNNIV 62
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSA 126
A LL++A+R E L K E++ SL + K DR+ S + +
Sbjct: 63 PSAEALLYAASRAE----LVK--------EVIIPSLNDGKI----VILDRFVDSSIVYQG 106
Query: 127 AKEGMDISWCFQPEK----GLPKPDAVLLFKLNEE----ALQRRKGFGDERYEQTDFQRK 178
G+ + + GL PD + + + + RRK E +F K
Sbjct: 107 YARGLGVEVVEEINSIAIDGLV-PDLTVYLDIKPKDTLMRIDRRKDKDRLEIEDAEFHEK 165
Query: 179 VAENYEKL---KDNIWIDIDADKDIDTLGLIVKDIVIDTIKK 217
V E Y KL K + +DA DI ++ ++ID + K
Sbjct: 166 VYEGYMKLIKSKPGRYFIVDATHDI----YYIQKVIIDEVSK 203
>gi|124267049|ref|YP_001021053.1| thymidylate kinase / thymidylate synthase [Methylibium
petroleiphilum PM1]
gi|124259824|gb|ABM94818.1| thymidylate kinase / thymidylate synthase [Methylibium
petroleiphilum PM1]
Length = 215
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 32/222 (14%)
Query: 6 PRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL 65
P G FI FEG D +GK++ + + + + P T + D L + ++
Sbjct: 9 PSGRFISFEGIDGAGKSSHLDAVAERWQRRGLEVVRTREPGGTPLAETLRDLVLHQGMDA 68
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
+A L+F+A R + + +E+G + DR++ + A+
Sbjct: 69 LTEAL-LIFAARRNHLQQCIAPALERGAVV-----------------LCDRFTDATFAYQ 110
Query: 126 AAKEGMDI-------SWCFQPEKGLPKPDAVLLFKLNEEALQRR--KGFGDERYEQTD-- 174
A G D+ SW + GL +PD L F L+ +R +R+E+ D
Sbjct: 111 GAGRGFDLAVLTTLESWVQRGPGGLRQPDLTLWFDLDPAVAAQRLVAARTPDRFERQDEA 170
Query: 175 FQRKVAENYE---KLKDNIWIDIDADKDIDTLGLIVKDIVID 213
F +V + Y + + ++ IDA + D + + + ++ +
Sbjct: 171 FFHRVRDGYRARFEAQPERFVRIDASQSRDQVAVQIAAMLAE 212
>gi|424812615|ref|ZP_18237855.1| thymidylate kinase [Candidatus Nanosalinarum sp. J07AB56]
gi|339756837|gb|EGQ40420.1| thymidylate kinase [Candidatus Nanosalinarum sp. J07AB56]
Length = 207
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 36/191 (18%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G F+ EGCD +GKT QAK+L D L P G + + + +L
Sbjct: 8 GDFVAIEGCDGAGKTVQAKRLADNLRDRGKDVLETQEPT-DFRCGKAVYDAIEN--DLSP 64
Query: 68 QAAHLLFSANRWER-----EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGV 122
+AA + F+A+R + EP L+K G T+ DRY S +
Sbjct: 65 EAAGMQFAADRLQHLERRIEPALSK----GKTV-----------------VCDRYVHSSL 103
Query: 123 AFSAAKEG----MDISWCFQPEKGLPKPDAVLLFKLNEEA---LQRRKGFGDERYEQTDF 175
A+ A + +D+ Q + + +PD +L +N R + E YE D
Sbjct: 104 AYQPALQHRTREVDLERVHQFNREITRPDLTVLLDINPATGLRRVRERDEEVEEYEGMDL 163
Query: 176 QRKVAENYEKL 186
QR+V NY +L
Sbjct: 164 QRQVRHNYLRL 174
>gi|85708666|ref|ZP_01039732.1| thymidylate kinase [Erythrobacter sp. NAP1]
gi|85690200|gb|EAQ30203.1| thymidylate kinase [Erythrobacter sp. NAP1]
Length = 216
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 81/201 (40%), Gaps = 44/201 (21%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI FEG + +GK+TQ KL D L + P T E +R+ + P
Sbjct: 6 RGLFIAFEGGEGTGKSTQTLKLADALRARGKVVEVTREPGGTPGA-----EAIRQLLLHP 60
Query: 67 ------DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRY- 117
QA LLF+A R + H + + +L++G DR+
Sbjct: 61 PGDGWGAQAEALLFAAARSD------------------HVAQHIKPSLEKGVWVVTDRFV 102
Query: 118 ----SFSGVAFSAAKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR-----KGFGDE 168
++ G A E + F + GL +PD +L +++E+ L +R G D
Sbjct: 103 DSSRAYQGGAGGLGDEAITALHAFGSD-GL-RPDLTILLEVDEDRLTQRLAERDGGTSDA 160
Query: 169 -RYEQTDFQRKVAENYEKLKD 188
D+ R VA + KL +
Sbjct: 161 IGGRSADYHRAVAARFRKLAE 181
>gi|399527864|ref|ZP_10767544.1| dTMP kinase [Actinomyces sp. ICM39]
gi|398361582|gb|EJN45331.1| dTMP kinase [Actinomyces sp. ICM39]
Length = 272
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 32/219 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI FEG D SGK+TQ + + D+ P T G I ++ E
Sbjct: 4 RGVFITFEGGDGSGKSTQIQSVRDWFESRGREVIVTREPGGT-ELGTEIRRLVQNGPEDV 62
Query: 67 D-QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT--NDRYSFSGVA 123
D + LL++A+R H + L++G DRY S +A
Sbjct: 63 DARTEALLYAADR------------------AYHVATVIAPALERGAVVLGDRYIDSSLA 104
Query: 124 FSAAKEGMDI----SWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQ--TDFQR 177
+ A + + S +GL P L L E RR+ +R E+ DF
Sbjct: 105 YQGAARSLGVDEIASLSAWATRGL-YPSLTFLLDLPPEVGARRRTDAPDRMERESMDFHE 163
Query: 178 KVAENYEKLKD---NIWIDIDADKDIDTLGLIVKDIVID 213
+V Y +L D + + IDA +D + ++ ++++
Sbjct: 164 RVRHEYLRLADAEPDRIVVIDAVGTVDEVFSEIRGVLVE 202
>gi|313896786|ref|ZP_07830334.1| dTMP kinase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974703|gb|EFR40170.1| dTMP kinase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 229
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 65/172 (37%), Gaps = 32/172 (18%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ +G + E D SGK TQ + L + L ++ + FPD + ++ YLR
Sbjct: 1 MAKGKLFIIEAGDGSGKETQTRLLAERLERDGHSILPITFPDYAADSSMLVRMYLRGDFG 60
Query: 64 ----ELPDQAAHLLFSANRWEREPT-LTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
++ AA F+ +R+ T + E G + DRY+
Sbjct: 61 THADDVNAYAASTFFAVDRYASYRTKWGRDYETGAVI-----------------LADRYT 103
Query: 119 FSGVAFSAAKEGMD------ISWCFQPE---KGLPKPDAVLLFKLNEEALQR 161
S + A K D + W + E GLP PDAV + A QR
Sbjct: 104 TSNMVHQAVKIQDDAERDAFLDWLYDLEFRKMGLPVPDAVFFLDMEPAAAQR 155
>gi|410693747|ref|YP_003624368.1| putative thymidylate kinase [Thiomonas sp. 3As]
gi|294340171|emb|CAZ88543.1| putative thymidylate kinase [Thiomonas sp. 3As]
Length = 215
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 33/187 (17%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G FI EG D +GK+TQ + +VD L N P T G I E L + P
Sbjct: 10 GLFISLEGIDGAGKSTQLQTVVDVLRAANRQVMLTREPGGT-EIGEKIRELLLHETMRPA 68
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
A L+F+A R+ + ++IE + D C DR++ + +A+
Sbjct: 69 TEALLMFAA----RQEHVLRVIEPALL-----------GGTDVVC--DRFTAATLAYQGG 111
Query: 128 KEGMDIS-------WCFQPEKGLPKPDAVLLFKLNEEALQRR--KGFGDERYEQ--TDFQ 176
+G+ W GL PD ++L + E +R + +R+EQ DF
Sbjct: 112 GKGIPTERLEALARWV---HPGL-CPDCIILIDVPPEVAAQRLEQTRQRDRFEQESVDFF 167
Query: 177 RKVAENY 183
+V NY
Sbjct: 168 ARVRANY 174
>gi|296135948|ref|YP_003643190.1| thymidylate kinase [Thiomonas intermedia K12]
gi|295796070|gb|ADG30860.1| thymidylate kinase [Thiomonas intermedia K12]
Length = 215
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 88/224 (39%), Gaps = 40/224 (17%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G F+ EG D +GK+TQ + +VD L N P T G I E L + P
Sbjct: 10 GLFVSLEGIDGAGKSTQLQTVVDVLRAANRQVMLTREPGGT-EIGEKIRELLLHQTMRPA 68
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
A L+F+A R+ + ++IE + D C DR++ + +A+
Sbjct: 69 TEALLMFAA----RQEHVLRVIEPALL-----------GGTDVVC--DRFTAATLAYQGG 111
Query: 128 KEGMDIS-------WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER----YEQTDFQ 176
+G+ W GL PD ++L + E +R +R E DF
Sbjct: 112 GKGIPTERLEALARWV---HPGL-CPDCIILIDVPPEVAAQRLAQTRQRDRFEQESVDFF 167
Query: 177 RKVAENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKK 217
+V NY + + W ID + + V+ + D +KK
Sbjct: 168 ARVRANYLQQAASAPEKWRVIDGTQTPEA----VQKTITDYLKK 207
>gi|452911030|ref|ZP_21959704.1| Thymidylate kinase [Kocuria palustris PEL]
gi|452833775|gb|EME36582.1| Thymidylate kinase [Kocuria palustris PEL]
Length = 250
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 90/229 (39%), Gaps = 46/229 (20%)
Query: 9 AFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQ 68
A I FEG D +GK+TQ + L + L + +P P G + E +R + P+
Sbjct: 40 ALIAFEGGDGAGKSTQLRLLAESLRERGVPVLLTREPG-----GSAMGEQIRSLVLDPEH 94
Query: 69 AA------HLLFSANRWER-EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSG 121
A LLF+A+R + TL + +GIT+ DRY S
Sbjct: 95 APVDPRTEALLFAASRSAHVQRTLLPALREGITV-----------------LTDRYLDSS 137
Query: 122 VAFSAAKEGMDIS-------WCFQPEKGLPKPDAVLLFKLNEEA---LQRRKGFGDERYE 171
VA+ A + W GL PD +L + EE + + E
Sbjct: 138 VAYQGAARELGTQTVRDLNLWAV---DGL-LPDLTVLLDVPEETGRARRAERAADRMEQE 193
Query: 172 QTDFQRKVAENYEKLKDNI---WIDIDADKDIDTLGLIVKDIVIDTIKK 217
F +V + + +L ++ + AD ++ L +++ V+D + +
Sbjct: 194 PAPFHEEVRQAFLELARQAPQRYLVLQADAPVEDLAAQIRERVLDLLAQ 242
>gi|297569137|ref|YP_003690481.1| thymidylate kinase [Desulfurivibrio alkaliphilus AHT2]
gi|296925052|gb|ADH85862.1| thymidylate kinase [Desulfurivibrio alkaliphilus AHT2]
Length = 222
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 77/200 (38%), Gaps = 21/200 (10%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G I EG D +GK+TQ + L L + + P G + E + L
Sbjct: 14 GVLIALEGIDGTGKSTQQQLLAQRLRQLGLEVVVTREPTDG-PYGRRLRELFLNRASLSP 72
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+ LF A+R E + KLIE + + DRY +S A+ A
Sbjct: 73 EEELQLFLADRREH---VAKLIEPAL-------------KAGRVVITDRYYYSTAAYQGA 116
Query: 128 KEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRR--KGFGDER--YEQTDFQRKVAENY 183
+ E P+PD VLL + RR +G G+ +EQ D+ R+VA +
Sbjct: 117 SGHDPAAILAINESFAPRPDLVLLLEAPPAVGVRRVQEGRGESLNDFEQEDYLRRVAGIF 176
Query: 184 EKLKDNIWIDIDADKDIDTL 203
+ ++A I+ +
Sbjct: 177 AGFSAPGLVRVNATGAIEQV 196
>gi|397663831|ref|YP_006505369.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila]
gi|395127242|emb|CCD05432.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila]
Length = 212
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 92/215 (42%), Gaps = 47/215 (21%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP- 66
G IV EG + +GK+T +V+ L++ I + P G I E LR I+ P
Sbjct: 6 GKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPG-----GTKIGEILRSIIKNPE 60
Query: 67 ------DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
D++ LL A R +LIEQ I + N Q DR+ S
Sbjct: 61 YNNVLDDRSELLLLYAAR-------IQLIEQVIKPAL---------NAGQWVIADRFELS 104
Query: 121 GVAFSAAKEGMDI-------SWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYE 171
+A+ MD+ ++C KG KPD L +N E + R K G +R E
Sbjct: 105 TLAYQGGGRKMDMRLINELSNFCL---KGF-KPDLTLYLDINPELGMIRAKSRGKFDRIE 160
Query: 172 Q--TDFQRKVAENYEKL-KDN--IWIDIDADKDID 201
Q +F ++ + Y L K N I + IDA++ ++
Sbjct: 161 QESIEFFHRIHDTYHILVKQNPDIMV-IDANRSLE 194
>gi|320530090|ref|ZP_08031160.1| dTMP kinase [Selenomonas artemidis F0399]
gi|320137523|gb|EFW29435.1| dTMP kinase [Selenomonas artemidis F0399]
Length = 229
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 65/172 (37%), Gaps = 32/172 (18%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ +G + E D SGK TQ + L + L ++ + FPD + ++ YLR
Sbjct: 1 MAKGKLFIIEAGDGSGKETQTRLLAERLERDGHSILPITFPDYAADSSMLVRMYLRGDFG 60
Query: 64 ----ELPDQAAHLLFSANRWEREPT-LTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
++ AA F+ +R+ T + E G + DRY+
Sbjct: 61 THADDVNAYAASTFFAVDRYASYRTKWGRDYETGAVI-----------------LADRYT 103
Query: 119 FSGVAFSAAKEGMD------ISWCFQPE---KGLPKPDAVLLFKLNEEALQR 161
S + A K D + W + E GLP PDAV + A QR
Sbjct: 104 TSNMVHQAVKIQDDAERDAFLDWLYDLEFRKMGLPVPDAVFFLDMEPAAAQR 155
>gi|225867971|ref|YP_002743919.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus]
gi|259494281|sp|C0MGT8.1|KTHY_STRS7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|225701247|emb|CAW98209.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus]
Length = 211
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 89/222 (40%), Gaps = 48/222 (21%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST-----GHIIDEYL 59
+ RG I FEG D +GKTT ++LV L +TI T G I E +
Sbjct: 1 MTRGKLITFEGPDGAGKTTVLERLVPLLQAA---------LGQTIVTTREPGGVAIAEKI 51
Query: 60 RKKI------ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCT 113
R+ I + D+ LL+ A R R+ + K++ LE H L
Sbjct: 52 RQLILDVSHTTMDDKTELLLYIAAR--RQHLVEKIMP---ALEAGHLVL----------- 95
Query: 114 NDRYSFSGVAFSAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER- 169
DR+ S VA+ A G+D I W PD L F + E R ER
Sbjct: 96 VDRFIDSSVAYQGAGRGLDKQAIQWLNHFATDGVDPDLTLYFDVPSELGLARIAQNTERE 155
Query: 170 -----YEQTDFQRKVAENYEKLK---DNIWIDIDADKDIDTL 203
EQ D ++V + Y +L + IDA +D++++
Sbjct: 156 VNRLDLEQLDLHQRVRKGYLELALENPQRIVKIDASQDLESV 197
>gi|42560606|ref|NP_975057.1| thymidylate kinase [Mycoplasma mycoides subsp. mycoides SC str.
PG1]
gi|59798304|sp|Q6MUI5.1|KTHY_MYCMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|42492102|emb|CAE76699.1| THYMIDYLATE KINASE [Mycoplasma mycoides subsp. mycoides SC str.
PG1]
gi|301320609|gb|ADK69252.1| dTMP kinase [Mycoplasma mycoides subsp. mycoides SC str.
Gladysdale]
Length = 213
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 41/229 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI------ 63
FI FEG D SGKTT K+ + L + N P G I E +R+ I
Sbjct: 2 FITFEGMDGSGKTTTLLKVKEELERLNYQVLITREPG-----GEAIAEQIRQIILDNKNR 56
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
++ LLF A+R + L K+I+ + EKN+ +DR+ S A
Sbjct: 57 DMDAWTEALLFIASRNQH---LQKVIKPAL-----------EKNI--IVISDRFIDSTSA 100
Query: 124 FSAAKEGMDISWCFQPEKGLPK---PDAVLLFKLN----EEALQRRKGFGDERY--EQTD 174
+ + + + Q ++ + K PD L F ++ E+ +Q R R E++D
Sbjct: 101 YQGSARNIGVDVVNQVQQIVLKNCLPDLTLFFDVSFSEAEKRMQIRGENSKNRLDEEKSD 160
Query: 175 FQRKVAENYEKLKDN----IWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
F++KV + Y +L N I + IDA++DID + I+++ +K+++
Sbjct: 161 FKQKVYQGYLELVKNNPKRIKV-IDANQDIDQVYNQAIKIILEKLKENE 208
>gi|374851631|dbj|BAL54585.1| dTMP kinase [uncultured prokaryote]
Length = 211
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 79/194 (40%), Gaps = 34/194 (17%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE-LP 66
G FI FEG + SGK+TQ L D L+K I P T G I E L K +
Sbjct: 2 GRFITFEGIEGSGKSTQVGLLADALSKKGIRCIKTREPGGT-PLGEKIREILLKTTSPIG 60
Query: 67 DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGVAF 124
LL+ + R E I Q I L+ G +DRY + +A+
Sbjct: 61 PMTELLLYLSARAEH-------IRQVII-----------PALNSGIWVISDRYCDATLAY 102
Query: 125 SAAKEGMDISWCFQPEK---GLPKPDAVLLFKLNEE-----ALQ--RRKGFGDERY--EQ 172
G+DI+ Q K G PD L + E A++ R+KG +R E
Sbjct: 103 QGFGRGLDIAEISQMNKLVTGGLLPDLTFLLDIPAELGLKRAMERLRQKGGSPDRLESES 162
Query: 173 TDFQRKVAENYEKL 186
+F R+V + Y ++
Sbjct: 163 LEFHRRVRDGYLRI 176
>gi|397667017|ref|YP_006508554.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila]
gi|395130428|emb|CCD08668.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila]
Length = 212
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 45/224 (20%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP- 66
G IV EG + +GK+T +V+ L++ I + P G I E LR I+ P
Sbjct: 6 GKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPG-----GTRIGEILRSIIKNPE 60
Query: 67 ------DQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFS 120
D++ LL A R +LIEQ I + N Q DR+ S
Sbjct: 61 YNNVLDDRSELLLLYAAR-------IQLIEQVIKPAL---------NEGQWVIADRFELS 104
Query: 121 GVAFSAAKEGMDI-------SWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYE 171
+A+ MD+ ++C KG KPD L +N E + R K G +R E
Sbjct: 105 TLAYQGGGRKMDMRVINELSNFCL---KGF-KPDLTLYLDINPELGMIRAKSRGKFDRIE 160
Query: 172 Q--TDFQRKVAENYEKL-KDNIWI-DIDADKDIDTLGLIVKDIV 211
Q +F ++ + Y L K N I IDA++ ++ + ++ ++
Sbjct: 161 QESIEFFHRIHDTYHILVKQNPEIMMIDANRSLEEVQSSIQSVI 204
>gi|83319417|ref|YP_424009.1| thymidylate kinase [Mycoplasma capricolum subsp. capricolum ATCC
27343]
gi|123536025|sp|Q2STA4.1|KTHY_MYCCT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|83283303|gb|ABC01235.1| thymidylate kinase [Mycoplasma capricolum subsp. capricolum ATCC
27343]
Length = 213
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 41/229 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI------ 63
FI FEG D SGKTT K+ + L + N P G +I E +R+ I
Sbjct: 2 FITFEGMDGSGKTTALLKVKEELERLNYKVLITREPG-----GEVIAEQIRQIILDNKNK 56
Query: 64 ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
++ LLF A+R + L K+I+ + EKN+ +DR+ S A
Sbjct: 57 DMDAWTEALLFIASRNQH---LQKVIKPAL-----------EKNI--IVISDRFIDSTSA 100
Query: 124 FSAAKEGMDISWCFQPEKGLPK---PDAVLLFKLN----EEALQRRKGFGDERY--EQTD 174
+ + + + + ++ + K PD L F ++ E+ +Q R R E+ +
Sbjct: 101 YQGSARNIGVDVVSEVQQIVLKNCLPDLTLFFDVSFSEAEKRMQIRGESSKNRLDKEENN 160
Query: 175 FQRKVAENYEKLKDN----IWIDIDADKDIDTLGLIVKDIVIDTIKKSQ 219
F++KV + Y +L N I + IDA+KDID + I+++ +K+++
Sbjct: 161 FKQKVYQGYLELVKNNPKRIKV-IDANKDIDQVYNQAIKIILEKLKENE 208
>gi|418056316|ref|ZP_12694369.1| Thymidylate kinase [Hyphomicrobium denitrificans 1NES1]
gi|353209535|gb|EHB74938.1| Thymidylate kinase [Hyphomicrobium denitrificans 1NES1]
Length = 209
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG FI FEG + GK+TQAK+L D L + +P P T + D L+ + P
Sbjct: 3 RGKFITFEGGEGVGKSTQAKRLADRLERTGVPVIVTREPGGTPVGEDVRDLILKDRPTDP 62
Query: 67 DQAAHLLFSANRWE 80
LLF+A R E
Sbjct: 63 -VTELLLFAAARAE 75
>gi|195978711|ref|YP_002123955.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975416|gb|ACG62942.1| thymidylate kinase Tmk [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 232
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 90/223 (40%), Gaps = 48/223 (21%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST-----GHIIDEY 58
++ RG I FEG D +GKTT ++LV L +TI T G I E
Sbjct: 21 KMTRGKLITFEGPDGAGKTTVLERLVPLLQAA---------LGQTIVTTREPGGVAIAEK 71
Query: 59 LRKKI------ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC 112
+R+ I + D+ LL+ A R R+ + K++ LE H L
Sbjct: 72 IRQLILDVSHTTMDDKTELLLYIAAR--RQHLVEKIMP---ALESGHLVL---------- 116
Query: 113 TNDRYSFSGVAFSAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER 169
DR+ S VA+ A G+D I W PD L F + E R ER
Sbjct: 117 -VDRFIDSSVAYQGAGRGLDKQAIQWLNHFATDGVDPDLTLYFDVPSELGLARIAQNTER 175
Query: 170 ------YEQTDFQRKVAENYEKLK---DNIWIDIDADKDIDTL 203
EQ D ++V + Y +L + IDA +D++++
Sbjct: 176 EINRLDLEQLDLHQRVRKGYLELALENPQRIVKIDASQDLESV 218
>gi|379058494|ref|ZP_09849020.1| thymidylate kinase [Serinicoccus profundi MCCC 1A05965]
Length = 221
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 37/220 (16%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL--RKKIE 64
RG FI EG D +GK+TQA++L D+L P T G + E + +
Sbjct: 16 RGLFIAVEGGDGAGKSTQARRLGDWLEGQGYAVLHTREPGGT-ELGRTLRELVLHGEDGS 74
Query: 65 LPDQAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+ ++A L+F+A+R T+ + +E+G E++ DRY S VA
Sbjct: 75 VSERAEALIFAADRAHHVATVVRPALERG---EVV--------------ITDRYLDSSVA 117
Query: 124 FSAAKEGM------DIS-WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQT--D 174
+ A + ++S W + PD +L ++ + + R+G +R E+ D
Sbjct: 118 YQGAARALGHDEVRELSMWATER----LVPDLTVLLDVSAQQGRVRRGQVHDRLEREADD 173
Query: 175 FQRKVAENYEKL---KDNIWIDIDADKDIDTLGLIVKDIV 211
F +V + + L + ++ +D D D L V++ V
Sbjct: 174 FHDRVRQGFLDLAAREPERYLVLDGHGDADRLAEQVRERV 213
>gi|424865947|ref|ZP_18289803.1| dTMP kinase [SAR86 cluster bacterium SAR86B]
gi|400758520|gb|EJP72727.1| dTMP kinase [SAR86 cluster bacterium SAR86B]
Length = 198
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 82/204 (40%), Gaps = 32/204 (15%)
Query: 11 IVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQAA 70
I FEG + GK+TQ L D+L + V P T S I + L EL +
Sbjct: 4 ITFEGIEGVGKSTQINLLKDFLIDRGMSVDIVREPGSTTSGEAIRNILLSNDYELNSKTE 63
Query: 71 HLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKEG 130
LL + R E L + + L DR+ + VA+ G
Sbjct: 64 LLLMFSARSELIKNLESSNQHDVILF------------------DRFYHASVAYQGYGRG 105
Query: 131 MDISWCFQPEKGL--PKPDAVLLFKLN---EEALQRRKGFGDERYEQT--DFQRKVAENY 183
+D+ + + PKPD L F L+ E + R+ +R E++ F KV + Y
Sbjct: 106 IDLDFINSLINFIDCPKPD--LTFILDNSVENSFNRKSSDVKDRIERSGESFFNKVRDGY 163
Query: 184 EKL----KDNIWIDIDADKDIDTL 203
+ KD I + IDA DIDT+
Sbjct: 164 LAIASENKDYIKV-IDASNDIDTI 186
>gi|337286432|ref|YP_004625905.1| thymidylate kinase [Thermodesulfatator indicus DSM 15286]
gi|335359260|gb|AEH44941.1| thymidylate kinase [Thermodesulfatator indicus DSM 15286]
Length = 380
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 78/184 (42%), Gaps = 27/184 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G I EG D SGK+T K L L + P + G I E+L ++
Sbjct: 177 GFLIAIEGLDGSGKSTFIKGLAQKLEEKGEKVCVTREPT-SGEWGQKIREHLAAGSKISP 235
Query: 68 QAAHLLFSANRWEREPT--LTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
QA LF +R E + KL + I L C DRY S +A+
Sbjct: 236 QAMAELFLRDRREHAQNFLIPKLQDGQIIL----------------C--DRYYLSTMAYQ 277
Query: 126 AAKEGMDISWCFQP-EKGLPKPDAVLLFKLN-EEALQR---RKGFGDERYEQTDFQRKVA 180
A E +DI + E P PD +L K++ EEAL+R RK + E +E +F KVA
Sbjct: 278 GACE-LDIKEIKKANETWAPVPDLILYLKVSVEEALKRVNQRKFYKPEVFETQEFLTKVA 336
Query: 181 ENYE 184
YE
Sbjct: 337 SIYE 340
>gi|73668631|ref|YP_304646.1| thymidylate kinase [Methanosarcina barkeri str. Fusaro]
gi|121722245|sp|Q46DH6.1|KTHY_METBF RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|72395793|gb|AAZ70066.1| thymidylate kinase [Methanosarcina barkeri str. Fusaro]
Length = 205
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 22/174 (12%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELP 66
RG I EG D SGK+T A+KL F P R TG +++ ++
Sbjct: 2 RGKLITLEGIDGSGKSTVAEKLQKNPEIKAFKPVFTREPTRGTLTGDAVEKAIQSDT--- 58
Query: 67 DQAAHL-LFSANRWEREPTLTKLIEQGITLEIMHSSLENEK-NLDQGCTNDRYSFSGVAF 124
DQ A L LF+A+ E L KLI+ +LEN K + ++ RY++ G+
Sbjct: 59 DQFAELFLFTADHAEH---LAKLIK---------PALENGKIVISDRYSDSRYAYQGITL 106
Query: 125 SAAKEGMDISWCFQPEKGLP-KPDAVLLFKLNEEALQRRKGFGDERYEQTDFQR 177
E + W + PD LF + E R G +R EQ+ F++
Sbjct: 107 KTRLEN-PLEWVKDLHRSWTIVPDLTFLFDIRPEISIERCG---KRGEQSKFEK 156
>gi|332709264|ref|ZP_08429228.1| thymidylate kinase [Moorea producens 3L]
gi|332351989|gb|EGJ31565.1| thymidylate kinase [Moorea producens 3L]
Length = 232
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 83/204 (40%), Gaps = 42/204 (20%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNI--------------PSQFVNFPDRTISTG 52
RG IVFEG + GKTTQ ++ ++L + P P T+
Sbjct: 4 RGKLIVFEGVEGGGKTTQLQRCSNWLRAGGLQDCLGNVCLGNQTMPVVVTREPGGTLLGA 63
Query: 53 HIIDEYL-RKKIELPDQAAHLLFSANRWEREPTLTK--LIEQGITLEIMHSSLENEKNLD 109
+ L R + +A LL++A+R E L K L+ I L
Sbjct: 64 KVRQLLLDRDSSPIHPRAELLLYAADRAEHVEELIKPQLVNGAIIL-------------- 109
Query: 110 QGCTNDRYSFSGVAFSAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLNEE-ALQRRKGF 165
C DRY+ S +A+ G+D I Q G + D L ++ E L+R +
Sbjct: 110 --C--DRYTDSTIAYQGYGRGIDLKLIEELNQIATGGLESDLTLWLDIDVEIGLERARQR 165
Query: 166 GD-ERYEQTD--FQRKVAENYEKL 186
G +R EQ D F R+V + +++L
Sbjct: 166 GTVDRMEQADLAFHRRVQQGFQEL 189
>gi|317056618|ref|YP_004105085.1| thymidylate kinase [Ruminococcus albus 7]
gi|315448887|gb|ADU22451.1| thymidylate kinase [Ruminococcus albus 7]
Length = 218
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 28/173 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
IV EG D SGK+TQ +KL +Y ++ + ++FPD + ++ YL +I +A
Sbjct: 5 LIVLEGLDGSGKSTQFEKLSEYFKNKDVKLKAISFPDYEDPSSTLVKMYLNGEIAGSAEA 64
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC--TNDRYSFSGVAFSAA 127
+ +++ + + ++ EK+ + GC RY S +
Sbjct: 65 VNAYAASSFYASDRYIS-------------YKKYWEKDYNDGCLILAARYVTSNCIYQMT 111
Query: 128 KEGMD-----ISWCFQPEK---GLPKPDAVLLFKLNEEALQR----RKGFGDE 168
K D ++W E LPKPD V+ + E QR R G GDE
Sbjct: 112 KLPEDEWENYLAWLEDYEYCKLSLPKPDKVIFLDMPIEISQRLLSARYG-GDE 163
>gi|349574320|ref|ZP_08886274.1| thymidylate kinase [Neisseria shayeganii 871]
gi|348014103|gb|EGY52993.1| thymidylate kinase [Neisseria shayeganii 871]
Length = 205
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 35/189 (18%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD-- 67
FI +G D +GKTTQ K + D+ + +P +F P G + E LR+ + PD
Sbjct: 5 FITLDGIDGAGKTTQLKVIRDWFARQGLPVRFTREPG-----GTPVGEALRQLLLSPDTR 59
Query: 68 ----QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
L+F+A E + + GI+ +DR++ + A
Sbjct: 60 IGLRAETLLMFAARAQHLEDVILPALHDGIS-----------------VVSDRFTDATFA 102
Query: 124 FSAAKEGM---DISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER----YEQTDFQ 176
+ A G+ D++ +G +PD L + +R E+ EQ F
Sbjct: 103 YQGAGRGLPADDVAALENWVQGSLRPDLTFLLDVPLAVSMQRIEENREKDRFEQEQAAFF 162
Query: 177 RKVAENYEK 185
+V E Y K
Sbjct: 163 TRVREGYLK 171
>gi|386845446|ref|YP_006263459.1| dTMP kinase [Actinoplanes sp. SE50/110]
gi|359832950|gb|AEV81391.1| dTMP kinase [Actinoplanes sp. SE50/110]
Length = 723
Score = 44.7 bits (104), Expect = 0.033, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 25/172 (14%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G F+VFEG + +GK+TQ +L D L P T G I L + P
Sbjct: 507 GLFVVFEGGEGAGKSTQVDRLADVLRAEGRDVVVTREPGATDLGGRIRGLVLDHSEDGPS 566
Query: 68 -QAAHLLFSANRWEREPTLTK-LIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
+A LL++A+R T+ + + +G + +DRY S +A+
Sbjct: 567 PRAEALLYAADRAHHVATVVRPALARGAVV-----------------ISDRYVDSSLAYQ 609
Query: 126 AAKEGM---DISWCFQPEKGLPKPDAVLLFKLNEEALQRR---KGFGDERYE 171
A + +ISW G KPD V+L ++ +R +G G +R E
Sbjct: 610 GAGRTLPVQEISWLSSWATGGLKPDLVVLLDVDPAIGLKRASARGAGVDRLE 661
>gi|226947280|ref|YP_002802371.1| putative thymidylate kinase [Clostridium botulinum A2 str. Kyoto]
gi|226842994|gb|ACO85660.1| putative thymidylate kinase [Clostridium botulinum A2 str. Kyoto]
Length = 231
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 67/171 (39%), Gaps = 44/171 (25%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ RG IV EG D SGK TQ KKL D L N + V FP+ + +I YL +
Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVTENKKVKKVEFPNYKSESSALIKMYLSGEFG 60
Query: 64 ELPDQ----AAHLLFSANR-------WEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC 112
PD A+ ++ +R WE ++ GI +
Sbjct: 61 RNPDSVNPYASSTFYAVDRFASYKKDWEEF-----YLKGGIIIA---------------- 99
Query: 113 TNDRYSFSGVAFSAAK--------EGMDISWCFQPEK-GLPKPDAVLLFKL 154
DRY+ S + AAK ++ W F+ K LP PD V+ +
Sbjct: 100 --DRYTTSNMIHQAAKIKDVQAKDNFLNWLWDFEFRKFNLPVPDCVIFLDM 148
>gi|281413072|ref|YP_003347151.1| thymidylate kinase [Thermotoga naphthophila RKU-10]
gi|281374175|gb|ADA67737.1| thymidylate kinase [Thermotoga naphthophila RKU-10]
Length = 197
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI FEG D SGK+TQ K L YL K P T TG I + L K+ E+ +A
Sbjct: 2 FITFEGIDGSGKSTQIKLLARYLEKRGKRVILKREPGGT-ETGEKIRKLLLKE-EMTPKA 59
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTN--DRYSFSGVAFSA- 126
LF A+R L +M E ++ L +G DRY+ S VA+
Sbjct: 60 ELFLFLASR---------------NLLVM----EIKRYLSEGYVVLLDRYTDSSVAYQGF 100
Query: 127 ----AKEGMDISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTDFQRKVAEN 182
KE ++ F + GL PD ++ E RKG + R+E+ +F +V E
Sbjct: 101 GRNLGKEIVEKLNDFATD-GLV-PDLTFYIDVDVETALNRKGELN-RFEKREFLERVREG 157
Query: 183 Y 183
Y
Sbjct: 158 Y 158
>gi|239637468|ref|ZP_04678442.1| thymidylate kinase [Staphylococcus warneri L37603]
gi|239596913|gb|EEQ79436.1| thymidylate kinase [Staphylococcus warneri L37603]
Length = 203
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 33/221 (14%)
Query: 9 AFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQ 68
AFI FEG + SGKTT K + + L ++ + TG I + + + ++ +
Sbjct: 3 AFITFEGPEGSGKTTVLKAVAEKLAQHY--DVISTREPGGVPTGEEIRKVVLEGNQMDIR 60
Query: 69 AAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAK 128
+LF+A+R E L+E+ + +L N +Q DRY S +A+
Sbjct: 61 TEAMLFAASRREH------LVEK------VMPALRN----NQIVLCDRYIDSSLAYQGYA 104
Query: 129 EGMDISWCFQPEK----GLPKPDAVLLFKLNEEALQRRKGFGDER------YEQTDFQRK 178
G+ I + GL PD + ++ E + R + ++R E DF K
Sbjct: 105 RGIGIEEVKALNEFAINGL-YPDLTIYLDVSAE-VGRERILSNQRDQNRLDQEDIDFHEK 162
Query: 179 VAENYEKLKDN---IWIDIDADKDIDTLGLIVKDIVIDTIK 216
V E Y ++ N ++ IDAD+ ID + L +I +K
Sbjct: 163 VIEGYHRVIHNEPERFVQIDADQSIDKVVLAAYQSIIKYLK 203
>gi|313113917|ref|ZP_07799475.1| dTMP kinase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623756|gb|EFQ07153.1| dTMP kinase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 223
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 34/181 (18%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKI- 63
+ +G IV EG D SGK TQAK L +L + + + FP+ + ++ YL +
Sbjct: 1 MSKGKLIVLEGLDGSGKATQAKLLAAHLKEQGFSVREITFPNYESDSSALVKMYLAGQFG 60
Query: 64 ELPD----QAAHLLFSANRW-EREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYS 118
+ PD AA ++ +R+ + E G + DRY+
Sbjct: 61 QHPDDVNAYAASSFYAVDRYASYKKDWGSFYENGGII-----------------IADRYT 103
Query: 119 FSGVAFSAAKEGMD-----ISWCFQPE---KGLPKPDAVLLFKLN---EEALQRRKGFGD 167
S +K + + W F E GLP PD V+ +++ + L ++ GD
Sbjct: 104 TSNAVHQCSKLPPEQWESFLGWLFDFEFHLLGLPAPDEVIYLQVDPAVSQKLMTQRYHGD 163
Query: 168 E 168
E
Sbjct: 164 E 164
>gi|187777353|ref|ZP_02993826.1| hypothetical protein CLOSPO_00905 [Clostridium sporogenes ATCC
15579]
gi|187774281|gb|EDU38083.1| dTMP kinase [Clostridium sporogenes ATCC 15579]
Length = 235
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 44/175 (25%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M ++ RG IV EG D SGK TQ KKL D L K N + V FP+ + +I YL
Sbjct: 1 MEDKMKRGRLIVIEGSDGSGKATQTKKLYDKLVKQNKKVKKVEFPNYKSESSALIKMYLS 60
Query: 61 KKI-ELPDQ----AAHLLFSANR-------WEREPTLTKLIEQGITLEIMHSSLENEKNL 108
+ + PD A+ ++ +R WE ++ GI +
Sbjct: 61 GEFGKNPDSVNPYASSTFYAVDRFASYKKDWEE-----FYLKGGIIIA------------ 103
Query: 109 DQGCTNDRYSFSGVAFSAAK--------EGMDISWCFQPEK-GLPKPDAVLLFKL 154
DRY+ S + AAK + ++ W F+ EK LP PD V+ +
Sbjct: 104 ------DRYTTSNMIHQAAKIKEVQAKDKFLNWLWDFEFEKFNLPVPDCVIFLDM 152
>gi|114565616|ref|YP_752770.1| dTMP kinase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114336551|gb|ABI67399.1| thymidylate kinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 210
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 27/188 (14%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYL-RKKIEL 65
+G FI EG D GKT+ + L+ Y +K P + P T+ + I + L K E+
Sbjct: 4 KGLFISLEGIDGCGKTSVKEGLLQYFSK--FPVLSIREPGGTLISEKIREILLDEKNQEI 61
Query: 66 PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFS 125
+ L++A R ++L+E+ I ++ + DRY S +A+
Sbjct: 62 TARTEAFLYAAAR-------SQLVEELIRPALLQGKI---------VLADRYLDSTIAYQ 105
Query: 126 AAKEGMDISWCFQPEK----GLPKPDAVLLFKLNEEALQRRKGFG-DERYEQ--TDFQRK 178
G+D+ + + GL KP LL ++ QRRK +R E+ +FQ +
Sbjct: 106 GYGRGLDLGFLTTLNQLCTSGL-KPHLTLLLDIDPAEGQRRKKKDIPDRLEKEGIEFQSR 164
Query: 179 VAENYEKL 186
V E Y K+
Sbjct: 165 VREGYLKI 172
>gi|118444724|ref|YP_879227.1| thymidylate kinase [Clostridium novyi NT]
gi|171472994|sp|A0Q3M5.1|KTHY_CLONN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|118135180|gb|ABK62224.1| thymidylate kinase [Clostridium novyi NT]
Length = 205
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 33/212 (15%)
Query: 7 RGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRK-KIEL 65
+GAFI EG + SGKTT K + YL++NNI P + I D L K + +
Sbjct: 3 KGAFITLEGPEGSGKTTIVKMIEKYLSENNIEYISTREPGGINISEQIRDVILNKDNVAM 62
Query: 66 PDQAAHLLFSANRWER--EPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
+ LL+ A+R + E + + E + + C DR+ S +A
Sbjct: 63 DARTEALLYVASRRQHLAERVIPAIKEGKVVI----------------C--DRFIDSSLA 104
Query: 124 FSAAKEGMDISWCFQPEKGLP---KPDAVLLFKLNEEALQRRKGFGDER------YEQTD 174
+ G+ I + PD L + E +R +ER E D
Sbjct: 105 YQGYARGIGIDEVMAINEFAIDGYMPDLTLYLDIEPEVGLKRISKNNEREVNRLDLEALD 164
Query: 175 FQRKVAENYEKLKD---NIWIDIDADKDIDTL 203
F +KV E Y KL + N I+A++ +D +
Sbjct: 165 FHKKVREGYFKLLEKYPNRIKKINANQPVDKV 196
>gi|75908183|ref|YP_322479.1| thymidylate kinase [Anabaena variabilis ATCC 29413]
gi|123609755|sp|Q3MBQ2.1|KTHY_ANAVT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
gi|75701908|gb|ABA21584.1| thymidylate kinase [Anabaena variabilis ATCC 29413]
Length = 211
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 77/192 (40%), Gaps = 32/192 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIE--- 64
G FIVFEG + GKT+Q + ++L I P T G + L +K E
Sbjct: 3 GRFIVFEGVEGCGKTSQMQLCAEWLQNLGISVILTREPGGT-ELGVDLRRLLLQKAEDKP 61
Query: 65 LPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQG--CTNDRYSFSGV 122
+ + LL++A+R + H + E + L QG DRY S +
Sbjct: 62 IAEVTELLLYAADRAQ------------------HVAQELKPKLAQGKYILCDRYVDSTI 103
Query: 123 AFSAAKEGMDISWCFQ----PEKGLPKPDAVLLFKLNEEALQRRKG--FGDERYEQ--TD 174
A+ +D++ Q GL + L E L R++G G +R EQ
Sbjct: 104 AYQGYGRNLDMNLIHQLNDIATGGLTSDITIWLDVDVEVGLARKRGENVGLDRIEQETIA 163
Query: 175 FQRKVAENYEKL 186
F R+V + Y L
Sbjct: 164 FHRRVQQGYANL 175
>gi|383775503|ref|YP_005460069.1| putative thymidylate kinase [Actinoplanes missouriensis 431]
gi|381368735|dbj|BAL85553.1| putative thymidylate kinase [Actinoplanes missouriensis 431]
Length = 665
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 24/156 (15%)
Query: 3 SQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKK 62
S + G F+VFEG + +GK+TQ L + L K P T I L K
Sbjct: 451 SFVASGCFVVFEGGEGAGKSTQVTLLAEALRKEGRDVVVTREPGATDLGARIRGLVLNKA 510
Query: 63 IELPD-QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC--TNDRYSF 119
+ P +A LL++A+R T+ + L +G +DRY
Sbjct: 511 EDAPSARAEALLYAADRAHHVATVVR------------------PALARGAVVVSDRYVD 552
Query: 120 SGVAFSAAKEGM---DISWCFQPEKGLPKPDAVLLF 152
S +A+ A + +ISW G KPD V+L
Sbjct: 553 SSLAYQGAGRTLPVQEISWLSSWATGGLKPDLVVLL 588
>gi|414564671|ref|YP_006043632.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus ATCC
35246]
gi|338847736|gb|AEJ25948.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus ATCC
35246]
Length = 256
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 90/223 (40%), Gaps = 48/223 (21%)
Query: 4 QIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIST-----GHIIDEY 58
++ RG I FEG D +GKTT ++LV L +TI T G I E
Sbjct: 45 KMTRGKLITFEGPDGAGKTTVLERLVPLLQAA---------LGQTIVTTREPGGVAIAEK 95
Query: 59 LRKKI------ELPDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGC 112
+R+ I + D+ LL+ A R R+ + K++ LE H L
Sbjct: 96 IRQLILDVSHTTMDDKTELLLYIAAR--RQHLVEKIMP---ALESGHLVLV--------- 141
Query: 113 TNDRYSFSGVAFSAAKEGMD---ISWCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDER 169
DR+ S VA+ A G+D I W PD L F + E R ER
Sbjct: 142 --DRFIDSSVAYQGAGRGLDKQAIQWLNHFATDGVDPDLTLYFDVPSELGLARIAQNTER 199
Query: 170 ------YEQTDFQRKVAENYEKLK---DNIWIDIDADKDIDTL 203
EQ D ++V + Y +L + IDA +D++++
Sbjct: 200 EINRLDLEQLDLHQRVRKGYLELALENPQRIVKIDASQDLESV 242
>gi|332528360|ref|ZP_08404360.1| thymidylate kinase [Hylemonella gracilis ATCC 19624]
gi|332042231|gb|EGI78557.1| thymidylate kinase [Hylemonella gracilis ATCC 19624]
Length = 211
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 31/191 (16%)
Query: 8 GAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPD 67
G F+ FEG D +GK+T ++L L + P T + L +K++
Sbjct: 3 GFFVSFEGIDGAGKSTHIERLAQVLREQGHMVTLTREPGGTPLAERLRALVLAEKMDALT 62
Query: 68 QAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAA 127
+A L+F+A R + + + +E DRY+ + A+
Sbjct: 63 EAL-LVFAARR-----------------DHLQTVIEPALARGDAVLCDRYTDASYAYQGG 104
Query: 128 KEGMDISWCFQPEK---------GLPKPDAVLLFKLNEE-ALQRRKGF-GDERYEQ--TD 174
G+D+S E+ GL +PD L F L E A +R G +++E
Sbjct: 105 GRGLDVSVLATLERWVQAKPGAAGLRQPDLTLWFDLAPELAAERLSGARAPDKFEAEPVA 164
Query: 175 FQRKVAENYEK 185
F R+VAE Y +
Sbjct: 165 FFRRVAEGYAR 175
>gi|11497681|ref|NP_068902.1| thymidylate kinase [Archaeoglobus fulgidus DSM 4304]
gi|6016458|sp|O30175.1|KTHY_ARCFU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
kinase
gi|2650584|gb|AAB91163.1| thymidylate kinase (tmk) [Archaeoglobus fulgidus DSM 4304]
Length = 196
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 36/211 (17%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIEL---- 65
I EG D +GKTT A + + L + + + P D KKI+
Sbjct: 2 LIAVEGIDGAGKTTIAAYIAELLKEKGYKVKVLKEPG---------DSKFGKKIKSSEER 52
Query: 66 --PDQAAHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVA 123
P++ L + + ++ G DRY FS +A
Sbjct: 53 LSPEEELELFLKDREIDARENILPALQSG-----------------YAVVMDRYYFSNIA 95
Query: 124 FSAAKEGMDISWCFQP-EKGLPKPDAVLLFKLNEE-ALQRRKGFGD-ERYEQTDFQRKVA 180
+ +A+ G+D + EK PKPD +L + E AL+R + G +E+ D+ RKV
Sbjct: 96 YQSAR-GIDARLIREMNEKIAPKPDLTILLDVEPEIALERVRKRGKLSPFEKLDYLRKVR 154
Query: 181 ENYEKLKDNIWIDIDADKDIDTLGLIVKDIV 211
+ + + D + +DA K ++ + V+ ++
Sbjct: 155 KCFLENADETTVVVDASKPLEEVKEEVRKVI 185
>gi|91203291|emb|CAJ72930.1| similar to thymidylate kinase [Candidatus Kuenenia stuttgartiensis]
Length = 234
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 5 IPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTIS-TGHIIDEYLRKKI 63
I +G IV G D SGKT Q K L + L K P ++FP + ++ +YLR
Sbjct: 8 IMQGKLIVITGIDGSGKTVQTKLLYERLLKEGYPVATIDFPQYGKTFFAEMVAKYLRGSF 67
Query: 64 ELPDQA----AHLLFSANRWEREPTLTKLIEQG 92
D A +L++ +R+E++ + I+ G
Sbjct: 68 GAADAVSPYLASILYAGDRFEKKDQIQTWIDAG 100
>gi|371496146|ref|YP_004957294.1| unnamed protein product [Planktothrix phage PaV-LD]
gi|325587513|gb|ADZ31528.1| thymidine kinase [Planktothrix phage PaV-LD]
Length = 195
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 79/197 (40%), Gaps = 33/197 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
I FEG DRSGKTTQ +KL D+ + P + + L+ P+Q
Sbjct: 4 LIAFEGIDRSGKTTQIRKLCDHFTALKLKFYITREP-----CDYDVRFELKNGCLTPEQQ 58
Query: 70 AHLLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAFSAAKE 129
L+ +R + PT+ L+E + DRY+ S +A+
Sbjct: 59 LKLILK-DRIKHNPTIKYLLEDSDLV-----------------LCDRYTDSTLAYQGYGH 100
Query: 130 GMDIS---WCFQPEKGLPKPDAVLLFKLNEEALQRRKGFGDERYEQTD----FQRKVAEN 182
G+++ G PD V+LF E RR D+ ++ + F +V
Sbjct: 101 GLNLDNLRKLNHDATGGIDPDMVILFDCPVEVAVRRN--LDKPLDKVERDLLFLDRVRFG 158
Query: 183 YEKL-KDNIWIDIDADK 198
Y +L + N WI IDA +
Sbjct: 159 YLELARQNNWIVIDATR 175
>gi|341615357|ref|ZP_08702226.1| thymidylate kinase [Citromicrobium sp. JLT1363]
Length = 215
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 1 MASQIPRGAFIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLR 60
M++ R FI FEG + GK+TQAK LV+ L + I + P T E +R
Sbjct: 1 MSTHPKRARFIAFEGGEGVGKSTQAKLLVEALAERGIDALLTREPGGTTGA-----EMIR 55
Query: 61 KKIELPD------QAAHLLFSANR 78
K + P QA LLF+A R
Sbjct: 56 KLLLAPPGTGWGVQAEALLFAAAR 79
>gi|320159579|ref|YP_004172803.1| thymidylate kinase [Anaerolinea thermophila UNI-1]
gi|319993432|dbj|BAJ62203.1| thymidylate kinase [Anaerolinea thermophila UNI-1]
Length = 205
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 10 FIVFEGCDRSGKTTQAKKLVDYLNKNNIPSQFVNFPDRTISTGHIIDEYLRKKIELPDQA 69
FI FEG + SGKTTQ + ++L P T I D+ + L + A
Sbjct: 2 FITFEGPEGSGKTTQIRLFAEFLRARGYDVLTTREPGGT----EISDQIRAVLVNLRNTA 57
Query: 70 AH-----LLFSANRWEREPTLTKLIEQGITLEIMHSSLENEKNLDQGCTNDRYSFSGVAF 124
H LLF A R +L+EQ I + +L +DRY+ S +A+
Sbjct: 58 MHPRTEILLFQAAR-------AQLVEQVIRPALSRGTL---------VLSDRYADSTLAY 101
Query: 125 SAAKEGM---DISWCFQPEKGLPKPDAVLLFKLN-EEALQRRKGFGD-ERYEQTD--FQR 177
G ++ G PD L +N + L+R++ G+ R + D F +
Sbjct: 102 QGYGHGYPLEELRRLIDFATGGLIPDLTFLLDVNPAQGLERKQREGEWNRLDAYDLGFHQ 161
Query: 178 KVAENY---EKLKDNIWIDIDADKDIDTL 203
+V Y + + + W+ +DA + I+ +
Sbjct: 162 RVRAGYLEMARAEPHRWVVVDATQSIEVI 190
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,647,517,796
Number of Sequences: 23463169
Number of extensions: 156384157
Number of successful extensions: 459725
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 929
Number of HSP's that attempted gapping in prelim test: 457608
Number of HSP's gapped (non-prelim): 1662
length of query: 227
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 90
effective length of database: 9,144,741,214
effective search space: 823026709260
effective search space used: 823026709260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)