Query psy16875
Match_columns 324
No_of_seqs 270 out of 1961
Neff 7.1
Searched_HMMs 46136
Date Sat Aug 17 00:19:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16875.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16875hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372|consensus 100.0 6E-80 1.3E-84 548.0 19.2 288 7-303 2-290 (303)
2 PTZ00480 serine/threonine-prot 100.0 1.3E-76 2.7E-81 560.6 31.9 299 3-301 6-304 (320)
3 KOG0374|consensus 100.0 8E-77 1.7E-81 563.7 27.4 296 3-298 4-303 (331)
4 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 2.2E-75 4.8E-80 548.6 30.7 292 7-298 1-292 (293)
5 PTZ00244 serine/threonine-prot 100.0 8.6E-75 1.9E-79 544.3 30.2 290 8-297 4-293 (294)
6 cd07420 MPP_RdgC Drosophila me 100.0 7.5E-74 1.6E-78 542.3 30.9 281 6-295 5-320 (321)
7 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1E-73 2.3E-78 535.4 29.1 284 7-299 1-285 (285)
8 PTZ00239 serine/threonine prot 100.0 8E-73 1.7E-77 532.7 29.7 287 7-302 2-290 (303)
9 smart00156 PP2Ac Protein phosp 100.0 7.2E-72 1.6E-76 520.5 30.4 270 29-298 1-270 (271)
10 cd07416 MPP_PP2B PP2B, metallo 100.0 3.3E-71 7.1E-76 523.4 30.8 285 7-300 2-299 (305)
11 cd07417 MPP_PP5_C PP5, C-termi 100.0 4.8E-71 1E-75 523.7 28.2 285 8-301 16-307 (316)
12 cd07419 MPP_Bsu1_C Arabidopsis 100.0 2.2E-70 4.8E-75 519.4 28.8 287 11-297 1-311 (311)
13 KOG0373|consensus 100.0 3.1E-71 6.8E-76 485.6 19.5 289 4-301 2-292 (306)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 1.4E-66 3.1E-71 499.8 30.5 290 8-298 12-366 (377)
15 KOG0375|consensus 100.0 3.7E-64 7.9E-69 466.7 14.5 267 28-295 60-339 (517)
16 KOG0371|consensus 100.0 5.5E-63 1.2E-67 442.2 14.7 287 8-303 20-307 (319)
17 KOG0377|consensus 100.0 7.7E-55 1.7E-59 412.8 16.7 269 28-297 133-431 (631)
18 KOG0376|consensus 100.0 1.6E-48 3.4E-53 376.7 13.7 277 29-306 183-466 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.2E-36 2.6E-41 274.7 21.0 214 59-283 1-224 (225)
20 cd07425 MPP_Shelphs Shewanella 99.9 1.2E-26 2.7E-31 208.6 17.3 176 59-269 1-197 (208)
21 PRK13625 bis(5'-nucleosyl)-tet 99.9 2.4E-26 5.3E-31 211.6 17.8 193 57-288 2-226 (245)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 2.4E-24 5.2E-29 195.6 17.7 115 59-176 2-143 (222)
23 PRK00166 apaH diadenosine tetr 99.9 7.3E-24 1.6E-28 197.9 21.0 218 57-288 2-262 (275)
24 cd07423 MPP_PrpE Bacillus subt 99.9 2.9E-24 6.4E-29 196.4 17.9 120 56-178 1-142 (234)
25 cd07422 MPP_ApaH Escherichia c 99.9 4E-24 8.6E-29 197.8 15.0 119 58-180 1-126 (257)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 1.1E-23 2.3E-28 195.8 14.7 120 57-180 2-128 (279)
27 PRK11439 pphA serine/threonine 99.9 3.5E-23 7.7E-28 187.4 13.8 115 56-176 17-146 (218)
28 cd07421 MPP_Rhilphs Rhilph pho 99.9 2.5E-22 5.3E-27 187.2 16.8 133 56-189 2-226 (304)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.9 2.2E-22 4.7E-27 180.6 14.9 180 56-269 1-195 (207)
30 PHA02239 putative protein phos 99.9 2.3E-22 5E-27 184.0 13.7 171 57-269 2-219 (235)
31 PRK09968 serine/threonine-spec 99.8 5.6E-21 1.2E-25 173.1 12.3 115 56-176 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 1.5E-12 3.2E-17 108.0 13.2 158 57-250 2-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.3 2.1E-10 4.7E-15 97.6 15.8 82 57-175 1-85 (155)
34 PF12850 Metallophos_2: Calcin 99.2 2.2E-10 4.7E-15 96.8 12.9 150 57-284 2-151 (156)
35 TIGR00040 yfcE phosphoesterase 99.2 9.4E-10 2E-14 94.3 14.5 62 57-127 2-64 (158)
36 PRK09453 phosphodiesterase; Pr 99.1 2E-10 4.3E-15 100.9 9.2 68 57-128 2-77 (182)
37 COG0639 ApaH Diadenosine tetra 99.1 2.3E-10 4.9E-15 94.7 5.5 143 129-272 3-154 (155)
38 cd07379 MPP_239FB Homo sapiens 99.0 2.7E-09 6E-14 89.0 9.9 118 57-255 1-120 (135)
39 cd07397 MPP_DevT Myxococcus xa 98.9 8.8E-09 1.9E-13 94.4 11.1 156 57-251 2-208 (238)
40 cd07388 MPP_Tt1561 Thermus the 98.9 6.2E-08 1.3E-12 88.2 15.3 71 56-127 5-75 (224)
41 cd07394 MPP_Vps29 Homo sapiens 98.8 2.4E-07 5.3E-12 81.4 16.6 125 57-268 1-134 (178)
42 cd00838 MPP_superfamily metall 98.8 4.6E-08 1E-12 78.6 11.1 118 59-256 1-120 (131)
43 cd07392 MPP_PAE1087 Pyrobaculu 98.7 7.2E-08 1.6E-12 83.8 10.6 65 58-128 1-66 (188)
44 PRK05340 UDP-2,3-diacylglucosa 98.7 8.1E-07 1.8E-11 81.5 15.8 205 57-288 2-232 (241)
45 TIGR01854 lipid_A_lpxH UDP-2,3 98.6 5E-07 1.1E-11 82.4 13.1 204 58-287 1-229 (231)
46 cd07404 MPP_MS158 Microscilla 98.6 3E-07 6.5E-12 79.2 10.3 67 58-127 1-68 (166)
47 cd07403 MPP_TTHA0053 Thermus t 98.6 9.5E-07 2.1E-11 73.5 11.4 107 59-255 1-107 (129)
48 cd07400 MPP_YydB Bacillus subt 98.4 5.8E-06 1.2E-10 69.2 12.3 118 58-256 1-130 (144)
49 cd07399 MPP_YvnB Bacillus subt 98.3 2.5E-05 5.4E-10 70.5 16.0 193 57-297 2-213 (214)
50 COG0622 Predicted phosphoester 98.3 2.5E-05 5.3E-10 68.4 15.1 159 56-296 2-164 (172)
51 cd07385 MPP_YkuE_C Bacillus su 98.2 3E-06 6.4E-11 76.1 6.2 71 56-128 2-77 (223)
52 PRK11148 cyclic 3',5'-adenosin 98.2 0.00019 4.1E-09 67.1 18.1 70 56-127 15-98 (275)
53 cd07395 MPP_CSTP1 Homo sapiens 98.2 0.00011 2.3E-09 68.0 16.2 71 57-127 6-99 (262)
54 PRK11340 phosphodiesterase Yae 98.1 5E-06 1.1E-10 77.8 7.0 70 56-127 50-125 (271)
55 cd07383 MPP_Dcr2 Saccharomyces 98.1 0.00011 2.3E-09 65.3 15.0 70 56-125 3-87 (199)
56 PRK04036 DNA polymerase II sma 98.1 2.7E-05 5.9E-10 79.1 12.3 112 55-174 243-387 (504)
57 PF06874 FBPase_2: Firmicute f 98.1 4.3E-05 9.4E-10 77.8 13.5 71 227-299 507-587 (640)
58 TIGR03729 acc_ester putative p 98.0 1.6E-05 3.4E-10 72.8 6.8 68 57-127 1-74 (239)
59 cd07398 MPP_YbbF-LpxH Escheric 97.9 0.0001 2.3E-09 65.7 10.5 26 227-252 177-202 (217)
60 cd07396 MPP_Nbla03831 Homo sap 97.9 3.7E-05 8E-10 71.6 7.6 73 57-129 2-88 (267)
61 COG2129 Predicted phosphoester 97.9 0.0025 5.4E-08 57.7 18.5 204 56-287 4-217 (226)
62 cd07390 MPP_AQ1575 Aquifex aeo 97.8 7.2E-05 1.6E-09 64.9 7.5 67 58-129 1-84 (168)
63 COG1409 Icc Predicted phosphoh 97.7 0.00085 1.8E-08 61.9 14.3 72 57-130 2-81 (301)
64 COG2908 Uncharacterized protei 97.7 0.0005 1.1E-08 62.7 12.2 197 60-289 2-229 (237)
65 cd07402 MPP_GpdQ Enterobacter 97.7 0.00013 2.7E-09 66.2 7.8 69 57-127 1-83 (240)
66 TIGR00619 sbcd exonuclease Sbc 97.7 0.0001 2.2E-09 68.3 7.2 71 57-127 2-88 (253)
67 cd07391 MPP_PF1019 Pyrococcus 97.7 0.00017 3.6E-09 62.8 7.6 58 71-128 30-89 (172)
68 cd08165 MPP_MPPE1 human MPPE1 97.6 0.00061 1.3E-08 58.5 10.6 47 82-128 38-90 (156)
69 PHA02546 47 endonuclease subun 97.6 0.00015 3.2E-09 70.1 7.1 72 57-128 2-90 (340)
70 KOG0376|consensus 97.6 6.4E-06 1.4E-10 81.2 -2.4 241 28-272 14-298 (476)
71 cd00840 MPP_Mre11_N Mre11 nucl 97.6 0.00015 3.2E-09 64.7 6.4 73 57-129 1-91 (223)
72 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.5 0.0002 4.4E-09 66.8 6.9 70 58-127 1-86 (262)
73 TIGR00024 SbcD_rel_arch putati 97.5 0.00033 7.3E-09 63.9 7.5 69 56-128 15-103 (225)
74 TIGR00583 mre11 DNA repair pro 97.2 0.0011 2.4E-08 65.6 7.7 73 56-128 4-124 (405)
75 cd07393 MPP_DR1119 Deinococcus 97.1 0.001 2.2E-08 60.7 6.5 45 226-272 180-227 (232)
76 cd07401 MPP_TMEM62_N Homo sapi 97.1 0.0015 3.2E-08 60.6 6.9 71 58-128 2-90 (256)
77 cd00839 MPP_PAPs purple acid p 97.0 0.0016 3.4E-08 61.0 6.8 70 56-129 5-83 (294)
78 PRK10966 exonuclease subunit S 96.9 0.0019 4E-08 64.1 6.5 71 57-128 2-88 (407)
79 cd07386 MPP_DNA_pol_II_small_a 96.9 0.0017 3.6E-08 59.6 5.6 68 59-128 2-95 (243)
80 COG1408 Predicted phosphohydro 96.6 0.0044 9.6E-08 58.5 6.3 72 56-129 45-120 (284)
81 cd07384 MPP_Cdc1_like Saccharo 96.5 0.0052 1.1E-07 53.6 5.6 48 81-128 44-101 (171)
82 cd07380 MPP_CWF19_N Schizosacc 96.5 0.0072 1.6E-07 51.7 6.1 119 59-250 1-121 (150)
83 cd08166 MPP_Cdc1_like_1 unchar 96.4 0.0072 1.6E-07 54.0 5.9 46 82-127 42-93 (195)
84 cd00845 MPP_UshA_N_like Escher 96.3 0.0064 1.4E-07 55.7 5.5 66 57-127 2-82 (252)
85 cd08163 MPP_Cdc1 Saccharomyces 96.3 0.19 4.2E-06 46.7 15.3 24 226-249 203-226 (257)
86 COG1407 Predicted ICC-like pho 96.3 0.014 3.1E-07 53.4 7.3 80 53-135 17-118 (235)
87 COG4186 Predicted phosphoester 96.0 0.031 6.7E-07 48.0 7.4 46 81-130 44-89 (186)
88 PLN02533 probable purple acid 95.7 0.014 3.1E-07 58.2 5.1 71 55-128 139-212 (427)
89 COG0420 SbcD DNA repair exonuc 95.5 0.04 8.8E-07 54.0 7.3 73 57-129 2-90 (390)
90 PF14582 Metallophos_3: Metall 95.5 0.016 3.6E-07 52.7 4.0 73 56-128 6-103 (255)
91 cd07410 MPP_CpdB_N Escherichia 95.4 0.023 5E-07 53.0 5.1 66 57-127 2-95 (277)
92 cd08164 MPP_Ted1 Saccharomyces 95.4 0.034 7.3E-07 49.6 5.8 66 62-127 23-111 (193)
93 COG1311 HYS2 Archaeal DNA poly 94.9 0.58 1.3E-05 47.0 13.3 197 57-272 227-450 (481)
94 cd07378 MPP_ACP5 Homo sapiens 94.4 0.1 2.2E-06 48.3 6.3 24 228-251 190-213 (277)
95 cd07408 MPP_SA0022_N Staphyloc 94.1 0.11 2.3E-06 48.1 5.9 66 57-127 2-82 (257)
96 KOG3325|consensus 93.7 0.68 1.5E-05 39.6 9.3 120 58-262 3-128 (183)
97 cd07412 MPP_YhcR_N Bacillus su 93.7 0.09 1.9E-06 49.6 4.6 66 57-127 2-88 (288)
98 cd07411 MPP_SoxB_N Thermus the 92.5 0.25 5.4E-06 45.8 5.7 65 57-127 2-95 (264)
99 cd07409 MPP_CD73_N CD73 ecto-5 91.9 0.4 8.7E-06 45.0 6.3 66 57-127 2-94 (281)
100 KOG3662|consensus 90.7 0.46 1E-05 46.9 5.6 71 56-126 49-143 (410)
101 cd07387 MPP_PolD2_C PolD2 (DNA 90.2 8.7 0.00019 35.8 13.3 49 240-293 204-255 (257)
102 PRK09419 bifunctional 2',3'-cy 90.2 0.4 8.7E-06 53.8 5.2 66 57-127 662-736 (1163)
103 cd00842 MPP_ASMase acid sphing 90.1 0.59 1.3E-05 43.8 5.6 72 58-130 40-125 (296)
104 COG1768 Predicted phosphohydro 89.2 0.85 1.8E-05 40.3 5.4 70 82-161 43-114 (230)
105 cd07406 MPP_CG11883_N Drosophi 89.0 0.84 1.8E-05 42.2 5.7 56 66-126 21-82 (257)
106 KOG3339|consensus 88.5 5.1 0.00011 35.6 9.7 85 84-173 40-140 (211)
107 PF04042 DNA_pol_E_B: DNA poly 87.5 1 2.2E-05 39.9 5.1 72 58-129 1-93 (209)
108 TIGR00282 metallophosphoestera 86.7 1.4 3.1E-05 41.2 5.7 67 57-128 2-72 (266)
109 KOG2863|consensus 85.5 2.7 5.8E-05 41.0 6.8 72 57-128 2-89 (456)
110 cd07407 MPP_YHR202W_N Saccharo 85.4 1.2 2.7E-05 41.9 4.6 66 57-127 7-97 (282)
111 cd07405 MPP_UshA_N Escherichia 85.0 1.4 3E-05 41.5 4.8 66 57-127 2-87 (285)
112 KOG1432|consensus 84.4 2.5 5.5E-05 40.8 6.2 71 57-128 55-148 (379)
113 cd07382 MPP_DR1281 Deinococcus 84.2 2.5 5.4E-05 39.3 6.0 67 57-128 1-71 (255)
114 KOG2476|consensus 83.5 2.7 5.9E-05 42.1 6.1 69 55-124 5-75 (528)
115 COG0737 UshA 5'-nucleotidase/2 83.4 1.7 3.6E-05 44.4 4.9 68 56-128 27-116 (517)
116 PRK09420 cpdB bifunctional 2', 82.1 2 4.4E-05 45.2 5.0 68 55-127 25-122 (649)
117 TIGR01390 CycNucDiestase 2',3' 81.0 2.3 5E-05 44.6 4.9 67 56-127 3-99 (626)
118 cd08162 MPP_PhoA_N Synechococc 80.6 3 6.5E-05 39.9 5.3 66 57-127 2-91 (313)
119 PRK09419 bifunctional 2',3'-cy 80.4 2.3 4.9E-05 47.9 5.0 67 56-127 42-139 (1163)
120 KOG0918|consensus 80.1 0.053 1.2E-06 52.9 -6.8 193 83-287 48-250 (476)
121 COG3855 Fbp Uncharacterized pr 79.7 1.4 2.9E-05 44.2 2.6 41 84-129 192-232 (648)
122 PTZ00235 DNA polymerase epsilo 77.8 8.4 0.00018 36.5 7.1 73 56-128 28-123 (291)
123 PF08321 PPP5: PPP5 TPR repeat 77.3 5.7 0.00012 31.3 5.0 41 10-54 55-95 (95)
124 KOG1378|consensus 76.5 3.8 8.2E-05 41.1 4.6 34 229-262 322-355 (452)
125 PRK11907 bifunctional 2',3'-cy 74.9 4.6 0.0001 43.7 5.1 67 56-127 116-213 (814)
126 COG3855 Fbp Uncharacterized pr 74.6 29 0.00063 35.1 10.1 69 228-297 515-592 (648)
127 PRK09558 ushA bifunctional UDP 72.8 5.7 0.00012 40.9 5.1 67 56-127 35-121 (551)
128 TIGR01530 nadN NAD pyrophospha 71.3 7.7 0.00017 40.1 5.6 65 58-127 3-94 (550)
129 KOG3947|consensus 67.4 8 0.00017 36.4 4.2 66 56-129 62-128 (305)
130 PTZ00422 glideosome-associated 67.1 11 0.00023 37.4 5.4 72 56-127 27-109 (394)
131 PRK09418 bifunctional 2',3'-cy 62.2 11 0.00025 40.6 4.9 67 55-126 39-141 (780)
132 KOG2310|consensus 58.1 29 0.00064 35.7 6.6 54 56-109 14-79 (646)
133 PF02875 Mur_ligase_C: Mur lig 54.0 50 0.0011 24.9 6.1 72 53-124 9-82 (91)
134 PF12641 Flavodoxin_3: Flavodo 53.4 1.4E+02 0.003 25.6 9.4 102 59-179 2-116 (160)
135 PF15007 CEP44: Centrosomal sp 47.1 9.5 0.00021 31.9 1.0 87 63-163 1-89 (131)
136 PLN02965 Probable pheophorbida 38.7 99 0.0021 27.6 6.5 70 168-249 6-81 (255)
137 PRK10773 murF UDP-N-acetylmura 38.5 98 0.0021 30.9 7.0 66 56-122 325-392 (453)
138 COG0148 Eno Enolase [Carbohydr 29.4 4.5E+02 0.0097 26.3 9.5 123 28-172 168-315 (423)
139 PF09949 DUF2183: Uncharacteri 28.9 2.2E+02 0.0049 22.4 6.2 45 67-120 51-95 (100)
140 PF13258 DUF4049: Domain of un 27.2 1.6E+02 0.0035 27.4 5.6 60 114-178 127-187 (318)
141 PF14164 YqzH: YqzH-like prote 25.9 2.4E+02 0.0052 20.6 5.3 43 7-50 5-47 (64)
142 PF06490 FleQ: Flagellar regul 25.6 1.8E+02 0.0039 23.1 5.2 64 57-127 1-81 (109)
143 TIGR01143 murF UDP-N-acetylmur 25.5 2.5E+02 0.0055 27.5 7.4 65 56-120 296-362 (417)
144 PF09637 Med18: Med18 protein; 25.3 99 0.0022 28.5 4.2 39 227-268 139-177 (250)
145 TIGR00282 metallophosphoestera 24.0 60 0.0013 30.4 2.4 39 85-127 2-41 (266)
146 TIGR03729 acc_ester putative p 22.7 1.4E+02 0.003 26.8 4.6 30 225-254 195-224 (239)
147 TIGR01143 murF UDP-N-acetylmur 21.4 4.3E+02 0.0094 25.9 8.1 84 30-127 308-409 (417)
148 smart00854 PGA_cap Bacterial c 21.1 1.7E+02 0.0038 26.3 4.9 39 231-271 197-235 (239)
149 COG0770 MurF UDP-N-acetylmuram 20.7 4.2E+02 0.0092 26.8 7.9 94 29-123 300-395 (451)
150 COG0634 Hpt Hypoxanthine-guani 20.5 6E+02 0.013 22.4 10.0 79 25-107 8-117 (178)
151 cd07382 MPP_DR1281 Deinococcus 20.4 92 0.002 28.9 2.9 39 85-126 1-39 (255)
No 1
>KOG0372|consensus
Probab=100.00 E-value=6e-80 Score=547.95 Aligned_cols=288 Identities=48% Similarity=0.952 Sum_probs=276.5
Q ss_pred CHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCCCHHHHHHHHHhCCCCCCceE
Q psy16875 7 NVDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPDANY 86 (324)
Q Consensus 7 ~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~ 86 (324)
+++..|.++... ..+++.++..||.++.++|.+|++++.++.|++|+|||||++.||..+|+..|-++..+|
T Consensus 2 dldr~ie~L~~~--------~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~Y 73 (303)
T KOG0372|consen 2 DLDRQIEQLRRC--------ELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNY 73 (303)
T ss_pred cHHHHHHHHHhc--------CCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCce
Confidence 577888888754 257899999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhc-HHHHHHHHHhhhcCCeEEEEc
Q psy16875 87 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPIAAIID 165 (324)
Q Consensus 87 vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPla~~i~ 165 (324)
+|||||||||-+|+|++.+|+.||++||+++++||||||.+.+++.|||++||.++|+ ..+|+...+.|+.||++|+|+
T Consensus 74 LFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid 153 (303)
T KOG0372|consen 74 LFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIID 153 (303)
T ss_pred EeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheec
Confidence 9999999999999999999999999999999999999999999999999999999995 689999999999999999999
Q ss_pred CcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEE
Q psy16875 166 EKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICR 245 (324)
Q Consensus 166 ~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIR 245 (324)
+++||||||+||.+.+++||+.+.|..++|..+.++|+|||||.+ ..+|.-++||+|+.||.+++++|++.||+++|+|
T Consensus 154 ~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee-~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~R 232 (303)
T KOG0372|consen 154 GKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEE-GPGWGLSPRGAGYLFGEDVVESFLEANGLSLICR 232 (303)
T ss_pred CcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCccc-CCCcccCCCCccccccHHHHHHHHHhCChHHHHH
Confidence 999999999999999999999999999999999999999999986 4699999999999999999999999999999999
Q ss_pred eecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEEcCCcceEEEEEccCccccc
Q psy16875 246 AHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAK 303 (324)
Q Consensus 246 gH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~ 303 (324)
+||.+.+||++.++++|+|||||||||+..+|.+|+|.++++....|.+|+..+...+
T Consensus 233 aHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~ 290 (303)
T KOG0372|consen 233 AHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESR 290 (303)
T ss_pred HHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhc
Confidence 9999999999999999999999999999999999999999999999999998765544
No 2
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.3e-76 Score=560.57 Aligned_cols=299 Identities=81% Similarity=1.457 Sum_probs=286.6
Q ss_pred cccCCHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCCCHHHHHHHHHhCCCCC
Q psy16875 3 DFELNVDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPP 82 (324)
Q Consensus 3 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG~~~~L~~il~~~~~~~ 82 (324)
.+..+++.+|+++++.....+++...++++++.+||++|+++|++||++++++++++|||||||++.+|.++|+..++++
T Consensus 6 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~ 85 (320)
T PTZ00480 6 KGEIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPP 85 (320)
T ss_pred ccCcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCC
Confidence 45678999999999876555666778999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEE
Q psy16875 83 DANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAA 162 (324)
Q Consensus 83 ~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~ 162 (324)
.++|||||||||||++++|++.+++++|+.+|.++++||||||...++..|||..|+..+|+..+|..+.++|+.||+||
T Consensus 86 ~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaA 165 (320)
T PTZ00480 86 ESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAA 165 (320)
T ss_pred cceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcE
Q psy16875 163 IIDEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDL 242 (324)
Q Consensus 163 ~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ 242 (324)
+|++++|||||||+|.+.++++|+++.||.+.++.+++.|+|||||.....+|.+++||.|+.||++++++||++|++++
T Consensus 166 iI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~ 245 (320)
T PTZ00480 166 LIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDL 245 (320)
T ss_pred eecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcE
Confidence 99999999999999999999999999999999999999999999999878899999999999999999999999999999
Q ss_pred EEEeecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEEcCCcceEEEEEccCccc
Q psy16875 243 ICRAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 301 (324)
Q Consensus 243 iIRgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 301 (324)
||||||++++||+++++++|+||||||||||..+|+||+|.|+++++++|.+++|.+..
T Consensus 246 IiR~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 246 ICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred EEEcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 99999999999999999999999999999999999999999999999999999877654
No 3
>KOG0374|consensus
Probab=100.00 E-value=8e-77 Score=563.70 Aligned_cols=296 Identities=71% Similarity=1.243 Sum_probs=283.3
Q ss_pred cccCCHHHHHHHHHhccCCCC--CccccCCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCCCHHHHHHHHHhCC-
Q psy16875 3 DFELNVDYLIQRLLEARGCRP--GKTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGG- 79 (324)
Q Consensus 3 ~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG~~~~L~~il~~~~- 79 (324)
..+..++++|.+++....... .....++++++.+||..+.++|..+|+++++++||.|+|||||++.||.++|+..|
T Consensus 4 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~ 83 (331)
T KOG0374|consen 4 MASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGS 83 (331)
T ss_pred cchhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCC
Confidence 346678899999988754222 22455999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhc-HHHHHHHHHhhhcC
Q psy16875 80 FPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCL 158 (324)
Q Consensus 80 ~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~L 158 (324)
+|++.+|||||||||||++|+|++.+|+++|++||+++++||||||.+.++..|||++||.++|+ ..+|+.++..|+.|
T Consensus 84 ~pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~m 163 (331)
T KOG0374|consen 84 FPPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCL 163 (331)
T ss_pred CCCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999 69999999999999
Q ss_pred CeEEEEcCcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhC
Q psy16875 159 PIAAIIDEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNH 238 (324)
Q Consensus 159 Pla~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~ 238 (324)
|++|+|+++++|+|||++|.+.++++|++|.||.+.++.++++|++||||.....+|.+|.||.++.||++++++||+++
T Consensus 164 p~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~ 243 (331)
T KOG0374|consen 164 PLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKL 243 (331)
T ss_pred chhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred CCcEEEEeecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEEcCCcceEEEEEccC
Q psy16875 239 DLDLICRAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPS 298 (324)
Q Consensus 239 ~~~~iIRgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 298 (324)
++++||||||++++||+++++++++||||||+|||.+.|+||+|.|++++.++|.+++|.
T Consensus 244 ~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 244 DLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred CcceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 999999999999999999999999999999999999999999999999999999999995
No 4
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=2.2e-75 Score=548.65 Aligned_cols=292 Identities=91% Similarity=1.555 Sum_probs=281.2
Q ss_pred CHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCCCHHHHHHHHHhCCCCCCceE
Q psy16875 7 NVDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPDANY 86 (324)
Q Consensus 7 ~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~ 86 (324)
+++.+|+++++......++...++++++.+||++|+++|++||++++++++++||||||||+.+|.++|+..++++.++|
T Consensus 1 ~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~ 80 (293)
T cd07414 1 DIDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNY 80 (293)
T ss_pred CHHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceE
Confidence 47889999998765555777789999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEEEEcC
Q psy16875 87 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDE 166 (324)
Q Consensus 87 vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~ 166 (324)
||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||..|+..+|+..+|..+.++|++||++|++++
T Consensus 81 lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~ 160 (293)
T cd07414 81 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDE 160 (293)
T ss_pred EEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEe
Q psy16875 167 KIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRA 246 (324)
Q Consensus 167 ~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRg 246 (324)
+++|||||++|.+.++++|+.+.||.+.++.+++.|+|||||.....+|.+|+||.|+.||++++++||++||+++||||
T Consensus 161 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 240 (293)
T cd07414 161 KIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRA 240 (293)
T ss_pred cEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEEC
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred ecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEEcCCcceEEEEEccC
Q psy16875 247 HQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPS 298 (324)
Q Consensus 247 H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 298 (324)
||++++||+++++++|+||||||||||..+|+||+|.|+++++++|.+++|.
T Consensus 241 He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 241 HQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred CccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999875
No 5
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=8.6e-75 Score=544.28 Aligned_cols=290 Identities=60% Similarity=1.142 Sum_probs=277.6
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCCCHHHHHHHHHhCCCCCCceEE
Q psy16875 8 VDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPDANYL 87 (324)
Q Consensus 8 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~v 87 (324)
++.+|.++++......+....++++++.+||++|+++|++||+++++++|++|||||||++.+|.++|+..++++.++||
T Consensus 4 ~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~l 83 (294)
T PTZ00244 4 VQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYL 83 (294)
T ss_pred HHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEE
Confidence 67899999986554455666789999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEEEEcCc
Q psy16875 88 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEK 167 (324)
Q Consensus 88 fLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~ 167 (324)
|||||||||++|+|++.+++++|+.+|.++++||||||...++..|||..++..+|+..+|..+.++|+.||++++++++
T Consensus 84 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~~~ 163 (294)
T PTZ00244 84 FLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVISEK 163 (294)
T ss_pred EeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEecCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEee
Q psy16875 168 IFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAH 247 (324)
Q Consensus 168 il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH 247 (324)
++|||||++|.+.++++++.+.||.+.++.+++.|++||||.....+|.+++||.|+.||++++++||++|++++|||||
T Consensus 164 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 243 (294)
T PTZ00244 164 IICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRAH 243 (294)
T ss_pred eEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEcC
Confidence 99999999999999999999999999999999999999999987789999999999999999999999999999999999
Q ss_pred cccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEEcCCcceEEEEEcc
Q psy16875 248 QVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKP 297 (324)
Q Consensus 248 ~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 297 (324)
|++++||+++++++|+||||||||||..+|+||+|.|+++++++|.+++.
T Consensus 244 q~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 244 QVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred ccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 99999999999999999999999999999999999999999999988764
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=7.5e-74 Score=542.31 Aligned_cols=281 Identities=35% Similarity=0.613 Sum_probs=256.5
Q ss_pred CCHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecC----CEEEEeccCCCHHHHHHHHHhCCCC
Q psy16875 6 LNVDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLELEA----PLKICGDIHGQYTDLLRLFEYGGFP 81 (324)
Q Consensus 6 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~~----~i~vvGDIHG~~~~L~~il~~~~~~ 81 (324)
-+++.+|+++++.. .++++++.+||++|+++|++||++++++. |++|||||||++.+|.++|+..|++
T Consensus 5 ~~~~~~i~~~~~~~--------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~ 76 (321)
T cd07420 5 DHIDALIEAFKEKQ--------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLP 76 (321)
T ss_pred HHHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCC
Confidence 35788888887542 57889999999999999999999999976 8999999999999999999999988
Q ss_pred C-CceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhc---HHHHHHHHHhhhc
Q psy16875 82 P-DANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN---IKLWKTFTDCFNC 157 (324)
Q Consensus 82 ~-~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~~~~~f~~ 157 (324)
+ .++|||||||||||++|+||+.+|++||+.+|+++++||||||.+.++..|||.+||..+|+ ..+|..+.++|+.
T Consensus 77 ~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~ 156 (321)
T cd07420 77 SPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSW 156 (321)
T ss_pred CccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHh
Confidence 5 46799999999999999999999999999999999999999999999999999999999997 7899999999999
Q ss_pred CCeEEEEcCcEEEecCCCCCCcccHHHHHhhcCCCC-----CCC----------------------chhHHHHhhcCCCC
Q psy16875 158 LPIAAIIDEKIFCCHGGLSPDLQMMEQIRRIMRPTD-----VPD----------------------TGLLCDLLWSDPDK 210 (324)
Q Consensus 158 LPla~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~-----~~~----------------------~~~~~dllWsDP~~ 210 (324)
||+||+|++++|||||||+| ..++++|+.+.|+.. .+. .+++.|+|||||..
T Consensus 157 LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~ 235 (321)
T cd07420 157 LPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKA 235 (321)
T ss_pred CCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCcc
Confidence 99999999999999999986 568999999887421 111 14678999999996
Q ss_pred CCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEEcCCcce
Q psy16875 211 DVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMC 290 (324)
Q Consensus 211 ~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~ 290 (324)
....|.+++||.|+.||++++++||++|++++||||||++++||++.++++|+||||||||||..+|+||+|.|++++++
T Consensus 236 ~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~ 315 (321)
T cd07420 236 QKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTP 315 (321)
T ss_pred CCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCce
Confidence 55557778899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EEEEE
Q psy16875 291 SFQIL 295 (324)
Q Consensus 291 ~~~~~ 295 (324)
+|.++
T Consensus 316 ~f~~~ 320 (321)
T cd07420 316 HFVQY 320 (321)
T ss_pred eEEEe
Confidence 88765
No 7
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1e-73 Score=535.41 Aligned_cols=284 Identities=51% Similarity=0.991 Sum_probs=271.4
Q ss_pred CHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCCCHHHHHHHHHhCCCCCCceE
Q psy16875 7 NVDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPDANY 86 (324)
Q Consensus 7 ~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~ 86 (324)
+++.+|+++++.. .++++++.+||++|+++|++||++++++.|++|||||||++.+|.++|+..++++.++|
T Consensus 1 ~~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~ 72 (285)
T cd07415 1 DLDKWIEQLKKCE--------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNY 72 (285)
T ss_pred CHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeE
Confidence 3678888888542 48899999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhcH-HHHHHHHHhhhcCCeEEEEc
Q psy16875 87 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI-KLWKTFTDCFNCLPIAAIID 165 (324)
Q Consensus 87 vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPla~~i~ 165 (324)
||||||||||++|+|++.+++++|+.+|.++++||||||...++..|||..|+..+|+. .+|..+.++|++||++|+++
T Consensus 73 lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~ 152 (285)
T cd07415 73 LFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALID 152 (285)
T ss_pred EEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeC
Confidence 99999999999999999999999999999999999999999999999999999999974 89999999999999999999
Q ss_pred CcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEE
Q psy16875 166 EKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICR 245 (324)
Q Consensus 166 ~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIR 245 (324)
++++||||||+|...++++|+.+.||.+.+..+++.|+|||||... .+|.+++||.|+.||++++++||++|++++|||
T Consensus 153 ~~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 231 (285)
T cd07415 153 NQIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICR 231 (285)
T ss_pred CeEEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEE
Confidence 9999999999999999999999999999998999999999999964 789999999999999999999999999999999
Q ss_pred eecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEEcCCcceEEEEEccCc
Q psy16875 246 AHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSE 299 (324)
Q Consensus 246 gH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 299 (324)
|||++++||++.++++|+|||||||||+..+|+||+|.|+++++++|.+++|.+
T Consensus 232 ~He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 232 AHQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred cCccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 999999999999999999999999999999999999999999999999998764
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=8e-73 Score=532.66 Aligned_cols=287 Identities=45% Similarity=0.913 Sum_probs=271.7
Q ss_pred CHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCCCHHHHHHHHHhCCCCCCceE
Q psy16875 7 NVDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPDANY 86 (324)
Q Consensus 7 ~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~ 86 (324)
+++.+|+++.+.. .++++++.+||++|+++|++||+++++++|++|||||||++.+|.++|+..+.++.++|
T Consensus 2 ~~~~~~~~~~~~~--------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~ 73 (303)
T PTZ00239 2 DIDRHIATLLNGG--------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANY 73 (303)
T ss_pred CHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceE
Confidence 5788899887542 47899999999999999999999999999999999999999999999999999899999
Q ss_pred EEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhcH-HHHHHHHHhhhcCCeEEEEc
Q psy16875 87 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI-KLWKTFTDCFNCLPIAAIID 165 (324)
Q Consensus 87 vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPla~~i~ 165 (324)
||||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||..|+..+|+. .+|+.+.++|+.||++|+++
T Consensus 74 lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~ 153 (303)
T PTZ00239 74 IFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIE 153 (303)
T ss_pred EEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEc
Confidence 99999999999999999999999999999999999999999999999999999999974 79999999999999999999
Q ss_pred CcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEE
Q psy16875 166 EKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICR 245 (324)
Q Consensus 166 ~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIR 245 (324)
++++||||||+|...++++|+.+.||.+.+.++.++|+|||||.. ..+|.+|+||.|+.||++++++||++|++++|||
T Consensus 154 ~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 232 (303)
T PTZ00239 154 GQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICR 232 (303)
T ss_pred CeEEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEE
Confidence 999999999999999999999999999999999999999999985 5789999999999999999999999999999999
Q ss_pred eecccccCceEEcC-ceEEEEecCCCCCCCCCCcEEEEEEcCCcceEEEEEccCcccc
Q psy16875 246 AHQVVDDGYEFFAK-RQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKA 302 (324)
Q Consensus 246 gH~~~~~G~~~~~~-~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~ 302 (324)
|||++++||++.++ ++|+|||||||||+..+|+||+|.+++++++.|.+++|.+.+.
T Consensus 233 ~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~ 290 (303)
T PTZ00239 233 AHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESA 290 (303)
T ss_pred cChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCccc
Confidence 99999999998664 5599999999999999999999999999999999999987764
No 9
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=7.2e-72 Score=520.49 Aligned_cols=270 Identities=57% Similarity=1.055 Sum_probs=262.3
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCCCHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHH
Q psy16875 29 MSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLA 108 (324)
Q Consensus 29 ~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~ 108 (324)
++++++.+||++|+++|++||+++++++|++|||||||++.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCcEEEECCCcccchhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEEEEcCcEEEecCCCCCCcccHHHHHhh
Q psy16875 109 YKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQMMEQIRRI 188 (324)
Q Consensus 109 lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~~~~i~~i 188 (324)
+|+.+|.++++||||||.+.++..|||..|+..+|+..+|+.+.++|+.||++++++++++|||||++|.+.++++|+++
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecC
Q psy16875 189 MRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSA 268 (324)
Q Consensus 189 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa 268 (324)
.||.+.+.+++++|+|||||.....+|.+|.||.|+.||++++++||++|++++||||||++++||+++++++|+|||||
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 240 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSA 240 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECC
Confidence 99999999999999999999877889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcEEEEEEcCCcceEEEEEccC
Q psy16875 269 PNYCGEFDNAGGMMSVDETLMCSFQILKPS 298 (324)
Q Consensus 269 ~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 298 (324)
||||+..+|+||++.|+++++++|.+++|.
T Consensus 241 ~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 241 PNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 999998899999999999999999988864
No 10
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.3e-71 Score=523.36 Aligned_cols=285 Identities=41% Similarity=0.819 Sum_probs=266.4
Q ss_pred CHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCCCHHHHHHHHHhCCCCCCceE
Q psy16875 7 NVDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPDANY 86 (324)
Q Consensus 7 ~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~ 86 (324)
+|+.+++.+++.. .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|
T Consensus 2 ~~~~~~~~~~~~~--------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~y 73 (305)
T cd07416 2 RIDVLKAHFMREG--------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRY 73 (305)
T ss_pred CHHHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceE
Confidence 5677788887542 47899999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEEEEcC
Q psy16875 87 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDE 166 (324)
Q Consensus 87 vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~ 166 (324)
||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+..+|..+.++|++||+++++++
T Consensus 74 lFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~ 153 (305)
T cd07416 74 LFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQ 153 (305)
T ss_pred EEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCC------CcccC-CCCCceecCHHHHHHHHHhCC
Q psy16875 167 KIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQ------GWGEN-DRGVSFTFGADVVSKFLHNHD 239 (324)
Q Consensus 167 ~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~------~~~~~-~rg~~~~fg~~~~~~fl~~~~ 239 (324)
+++|||||++|.+.++++|+.+.|+.+.+..++++|+|||||..... +|.++ .||.|+.||++++++||++|+
T Consensus 154 ~i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~ 233 (305)
T cd07416 154 QFLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNN 233 (305)
T ss_pred CEEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcC
Confidence 99999999999999999999999999888899999999999975432 47665 899999999999999999999
Q ss_pred CcEEEEeecccccCceEEcCc------eEEEEecCCCCCCCCCCcEEEEEEcCCcceEEEEEccCcc
Q psy16875 240 LDLICRAHQVVDDGYEFFAKR------QLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEK 300 (324)
Q Consensus 240 ~~~iIRgH~~~~~G~~~~~~~------~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~ 300 (324)
+++||||||++++||++++++ +|+||||||||||..+|+||+|.|+++. +.|.++.+.+.
T Consensus 234 l~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~ 299 (305)
T cd07416 234 LLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 299 (305)
T ss_pred CeEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCC
Confidence 999999999999999998876 8999999999999999999999999885 68888887654
No 11
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=4.8e-71 Score=523.69 Aligned_cols=285 Identities=40% Similarity=0.794 Sum_probs=265.7
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCC----EEEEeccCCCHHHHHHHHHhCCCCCC
Q psy16875 8 VDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLELEAP----LKICGDIHGQYTDLLRLFEYGGFPPD 83 (324)
Q Consensus 8 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~----i~vvGDIHG~~~~L~~il~~~~~~~~ 83 (324)
++.+++++.... .++++++.+||++|.++|++||++++++.| ++|||||||++.+|.++|+..++++.
T Consensus 16 ~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~ 87 (316)
T cd07417 16 VKEMIEWFKDQK--------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSE 87 (316)
T ss_pred HHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCc
Confidence 667777776431 478899999999999999999999999765 99999999999999999999998765
Q ss_pred -ceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEE
Q psy16875 84 -ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAA 162 (324)
Q Consensus 84 -~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~ 162 (324)
++|||||||||||++|+||+.+++++|+.+|+++++||||||.+.++..|||..|+..+|+..+|..+.++|+.||+++
T Consensus 88 ~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~~LPlaa 167 (316)
T cd07417 88 TNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFNWLPLAH 167 (316)
T ss_pred cCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHHhchHhh
Confidence 4699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCcEEEecCCC-CCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCc
Q psy16875 163 IIDEKIFCCHGGL-SPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLD 241 (324)
Q Consensus 163 ~i~~~il~vHgGi-~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~ 241 (324)
+++++++|||||+ +|...++++++++.|+.+.+.++++.|+|||||.. ..+|.+++||.|+.||++++++||++|+++
T Consensus 168 ii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~ 246 (316)
T cd07417 168 LINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQP-QPGRSPSKRGVGCQFGPDVTKRFLEENNLE 246 (316)
T ss_pred eeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCC-CCCCCccCCCCceEeCHHHHHHHHHHcCCc
Confidence 9999999999999 56788999999999998888899999999999986 468999999999999999999999999999
Q ss_pred EEEEeecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEEcC-CcceEEEEEccCccc
Q psy16875 242 LICRAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDE-TLMCSFQILKPSEKK 301 (324)
Q Consensus 242 ~iIRgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~-~~~~~~~~~~~~~~~ 301 (324)
+||||||++++||++.++++|+||||||||||..+|+||+|.|++ +++++|.+|+|.+..
T Consensus 247 ~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~ 307 (316)
T cd07417 247 YIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHP 307 (316)
T ss_pred EEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCC
Confidence 999999999999999999999999999999999999999999999 899999999876543
No 12
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=2.2e-70 Score=519.45 Aligned_cols=287 Identities=46% Similarity=0.853 Sum_probs=266.8
Q ss_pred HHHHHHhccCCCC--CccccCCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCCCHHHHHHHHHhCCCCCC-----
Q psy16875 11 LIQRLLEARGCRP--GKTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPD----- 83 (324)
Q Consensus 11 ~i~~~~~~~~~~~--~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~----- 83 (324)
+|.+++++..+++ .....++++++.+||++|+++|++||++++++++++||||||||+.+|.++|+..++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 4788888877765 556779999999999999999999999999999999999999999999999999988754
Q ss_pred ---ceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhcH------HHHHHHHHh
Q psy16875 84 ---ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI------KLWKTFTDC 154 (324)
Q Consensus 84 ---~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~------~~~~~~~~~ 154 (324)
.+|||||||||||++|+||+.+++++++.+|.++++||||||.+.++..+||..++..+|+. .+|..+.++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999988864 689999999
Q ss_pred hhcCCeEEEEcCcEEEecCCCCCCcccHHHHHhhcCCC-CCCCchhHHHHhhcCCCCC--CCCcccCC---CCCc--eec
Q psy16875 155 FNCLPIAAIIDEKIFCCHGGLSPDLQMMEQIRRIMRPT-DVPDTGLLCDLLWSDPDKD--VQGWGEND---RGVS--FTF 226 (324)
Q Consensus 155 f~~LPla~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~-~~~~~~~~~dllWsDP~~~--~~~~~~~~---rg~~--~~f 226 (324)
|+.||++++++++++|||||++|.+.++++|+.+.||. ..+..+++.|++||||... ..+|.++. ||.| +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999999999999999999999999999997 4456788999999999864 35777766 9988 799
Q ss_pred CHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEEcCCcceEEEEEcc
Q psy16875 227 GADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKP 297 (324)
Q Consensus 227 g~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 297 (324)
|++++++||++||+++||||||++++||++.++++|+|||||||||+..+|+||++.|++++++++.+++|
T Consensus 241 g~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
No 13
>KOG0373|consensus
Probab=100.00 E-value=3.1e-71 Score=485.55 Aligned_cols=289 Identities=44% Similarity=0.897 Sum_probs=275.8
Q ss_pred ccCCHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCCCHHHHHHHHHhCCCCCC
Q psy16875 4 FELNVDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPD 83 (324)
Q Consensus 4 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~ 83 (324)
.++++++-|..+-+-+ -++++|+..||+-++++|..|.++..++.|+.|+|||||++.||.++|+..|--|+
T Consensus 2 ~~~d~d~wi~~vk~ck--------yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~ 73 (306)
T KOG0373|consen 2 RKMDLDQWIETVKKCK--------YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPD 73 (306)
T ss_pred CcCCHHHHHHHHHHcC--------CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCC
Confidence 3567888888774331 48899999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhc-HHHHHHHHHhhhcCCeEE
Q psy16875 84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPIAA 162 (324)
Q Consensus 84 ~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPla~ 162 (324)
..|||+|||||||-+|+|++.+|+.||.+||.++.+||||||.+.+...|||++||+.+|+ ...|+...+.|+.|+++|
T Consensus 74 tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaA 153 (306)
T KOG0373|consen 74 TNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAA 153 (306)
T ss_pred cceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999996 689999999999999999
Q ss_pred EEcCcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcE
Q psy16875 163 IIDEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDL 242 (324)
Q Consensus 163 ~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ 242 (324)
+|+++++|||||+||++.+++||+-+.|..++|..+..+|++||||.. .+.|.-++||+|+.||.+++++|+.-|++++
T Consensus 154 iID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~L 232 (306)
T KOG0373|consen 154 IIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLNL 232 (306)
T ss_pred HhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccchHH
Confidence 999999999999999999999999999999999999999999999985 8899999999999999999999999999999
Q ss_pred EEEeecccccCceEEcCce-EEEEecCCCCCCCCCCcEEEEEEcCCcceEEEEEccCccc
Q psy16875 243 ICRAHQVVDDGYEFFAKRQ-LVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 301 (324)
Q Consensus 243 iIRgH~~~~~G~~~~~~~~-~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 301 (324)
|.|+||.+.+||++++++| ++|||||||||+.++|.+++|.++++++.++++|...+..
T Consensus 233 icRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~ 292 (306)
T KOG0373|consen 233 ICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDN 292 (306)
T ss_pred HHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCc
Confidence 9999999999999999888 9999999999999999999999999999999999877655
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=1.4e-66 Score=499.80 Aligned_cols=290 Identities=33% Similarity=0.636 Sum_probs=252.1
Q ss_pred HHHHHHHHHhccCC-CC-CccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CCEEEEeccCCCHHHHHHHHHhCCCC
Q psy16875 8 VDYLIQRLLEARGC-RP-GKTVQMSEAEVRGLCLKSREIFLQQPILLELE----APLKICGDIHGQYTDLLRLFEYGGFP 81 (324)
Q Consensus 8 ~~~~i~~~~~~~~~-~~-~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~----~~i~vvGDIHG~~~~L~~il~~~~~~ 81 (324)
++.+|.++-...+. .| .....++.+++.+||++|+++|++||++++++ .+++|||||||++.+|.++|+..+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~g~~ 91 (377)
T cd07418 12 VHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGFP 91 (377)
T ss_pred HHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHhCCC
Confidence 56777776443211 11 22344789999999999999999999999998 79999999999999999999999988
Q ss_pred CC-ceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhcH---HHHHHHHHhhhc
Q psy16875 82 PD-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI---KLWKTFTDCFNC 157 (324)
Q Consensus 82 ~~-~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~~~f~~ 157 (324)
+. ..|||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+. .+|+.+.++|++
T Consensus 92 ~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f~~ 171 (377)
T cd07418 92 DQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFEG 171 (377)
T ss_pred CCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHHHHh
Confidence 75 45999999999999999999999999999999999999999999999999999999999964 799999999999
Q ss_pred CCeEEEEcCcEEEecCCCC---------------------------CCcccHHHHHhhcCCC-CCCCch---hHHHHhhc
Q psy16875 158 LPIAAIIDEKIFCCHGGLS---------------------------PDLQMMEQIRRIMRPT-DVPDTG---LLCDLLWS 206 (324)
Q Consensus 158 LPla~~i~~~il~vHgGi~---------------------------p~~~~~~~i~~i~r~~-~~~~~~---~~~dllWs 206 (324)
||+++++++++|||||||+ |.+.++++|+.++||. +.+..+ +++|+|||
T Consensus 172 LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dlLWS 251 (377)
T cd07418 172 LPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWS 251 (377)
T ss_pred CCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccceeeEee
Confidence 9999999999999999993 4567899999999974 555443 47899999
Q ss_pred CCCCCCCCcccC-CCCCceecCHHHHHHHHHhCCCcEEEEeecc------------cccCceEEcC---ceEEEEecCCC
Q psy16875 207 DPDKDVQGWGEN-DRGVSFTFGADVVSKFLHNHDLDLICRAHQV------------VDDGYEFFAK---RQLVTLFSAPN 270 (324)
Q Consensus 207 DP~~~~~~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~------------~~~G~~~~~~---~~~itifSa~~ 270 (324)
||... .+|.++ .||.|+.||++++++||++|++++||||||+ +++||++.++ ++|+|||||||
T Consensus 252 DP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvFSa~n 330 (377)
T cd07418 252 DPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLFSAPD 330 (377)
T ss_pred CCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEecCCc
Confidence 99864 677665 7999999999999999999999999999996 6799999887 99999999999
Q ss_pred CC------CCCCCcEEEEEEcCC--cceEEEEEccC
Q psy16875 271 YC------GEFDNAGGMMSVDET--LMCSFQILKPS 298 (324)
Q Consensus 271 y~------~~~~n~ga~l~i~~~--~~~~~~~~~~~ 298 (324)
|| +.++|+||++.++.+ ...+|++|+.+
T Consensus 331 Y~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~ 366 (377)
T cd07418 331 YPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAV 366 (377)
T ss_pred cccccccccccCcceEEEEEecCCCCCccceEeecc
Confidence 99 578999999998654 35667766544
No 15
>KOG0375|consensus
Probab=100.00 E-value=3.7e-64 Score=466.69 Aligned_cols=267 Identities=40% Similarity=0.853 Sum_probs=251.3
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCCCHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHH
Q psy16875 28 QMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLL 107 (324)
Q Consensus 28 ~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~ 107 (324)
.++++..+.|+.++..+|++|++++++++||+|+|||||+|.||.++|+..|-|...+|+|||||||||..|+||+.+|.
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLw 139 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLW 139 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEEEEcCcEEEecCCCCCCcccHHHHHh
Q psy16875 108 AYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQMMEQIRR 187 (324)
Q Consensus 108 ~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~~~~i~~ 187 (324)
+||+.||..+++||||||.+.+...+.|.+||..+|+.++|+...+.|+.||+||+.+++++|||||+||.+.++++|++
T Consensus 140 sLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~ 219 (517)
T KOG0375|consen 140 SLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRK 219 (517)
T ss_pred HHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCchhHHHHhhcCCCCCC------CCcccC-CCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCc
Q psy16875 188 IMRPTDVPDTGLLCDLLWSDPDKDV------QGWGEN-DRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKR 260 (324)
Q Consensus 188 i~r~~~~~~~~~~~dllWsDP~~~~------~~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~ 260 (324)
+.|..++|..+.+||+|||||.++. ..|.+| -||+++.|...|+.+||+.||+--|||+||.++.||+.+...
T Consensus 220 l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrks 299 (517)
T KOG0375|consen 220 LDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 299 (517)
T ss_pred hhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcc
Confidence 9999999999999999999998642 234444 699999999999999999999999999999999999987655
Q ss_pred e------EEEEecCCCCCCCCCCcEEEEEEcCCcceEEEEE
Q psy16875 261 Q------LVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQIL 295 (324)
Q Consensus 261 ~------~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~ 295 (324)
+ +|||||||||.+.++|++|||..+++.. -+++|
T Consensus 300 qttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNVM-NIRQF 339 (517)
T KOG0375|consen 300 QTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM-NIRQF 339 (517)
T ss_pred cccCCchheeeecCCchhhhhccHHHHhhhhcccc-eeecc
Confidence 4 8999999999999999999999988754 34444
No 16
>KOG0371|consensus
Probab=100.00 E-value=5.5e-63 Score=442.17 Aligned_cols=287 Identities=48% Similarity=0.956 Sum_probs=270.1
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCCCHHHHHHHHHhCCCCCCceEE
Q psy16875 8 VDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPDANYL 87 (324)
Q Consensus 8 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~v 87 (324)
++..|.++.+- + .+++.++..+|+.|+++|.+|.++..+..|++|+||+||||++|.++++..|..++..|+
T Consensus 20 vd~~ie~L~~c---k-----~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnyl 91 (319)
T KOG0371|consen 20 VDPWIEQLYKC---K-----PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYL 91 (319)
T ss_pred cccchHHHHhc---C-----CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCccee
Confidence 44555555432 1 467889999999999999999999999999999999999999999999999999999999
Q ss_pred EeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHh-cHHHHHHHHHhhhcCCeEEEEcC
Q psy16875 88 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIIDE 166 (324)
Q Consensus 88 fLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LPla~~i~~ 166 (324)
|+|||||||++|.|++.+|.++|++||++|.+||||||.+.+...|||++||.++| ...+|+.|.+.|+.+|++|.|++
T Consensus 92 fmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~ 171 (319)
T KOG0371|consen 92 FMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIES 171 (319)
T ss_pred eeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999 56899999999999999999999
Q ss_pred cEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEe
Q psy16875 167 KIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRA 246 (324)
Q Consensus 167 ~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRg 246 (324)
+|||+|||++|.+.++++++.+.|..++|.++-++|+|||||.. ..+|..++||.|+.||.+..++|-.+||++++-|+
T Consensus 172 ~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpdd-r~gwg~sprgag~tfg~di~~~fn~~n~lslisRa 250 (319)
T KOG0371|consen 172 KIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRA 250 (319)
T ss_pred ceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCccc-CCCCCCCCCCCCcccchhhHHHhhccCCchHhHHH
Confidence 99999999999999999999999988999999999999999985 68999999999999999999999999999999999
Q ss_pred ecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEEcCCcceEEEEEccCccccc
Q psy16875 247 HQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAK 303 (324)
Q Consensus 247 H~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~ 303 (324)
||.+.+||.+.+...++|+|||||||+..+|.+|++.++++....|.+|+|++-+-+
T Consensus 251 hqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e 307 (319)
T KOG0371|consen 251 HQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVE 307 (319)
T ss_pred HHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccccc
Confidence 999999999999999999999999999999999999999999999999999664443
No 17
>KOG0377|consensus
Probab=100.00 E-value=7.7e-55 Score=412.77 Aligned_cols=269 Identities=32% Similarity=0.611 Sum_probs=241.8
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeec----CCEEEEeccCCCHHHHHHHHHhCCCCCCc-eEEEeCcccCCCCCcHHH
Q psy16875 28 QMSEAEVRGLCLKSREIFLQQPILLELE----APLKICGDIHGQYTDLLRLFEYGGFPPDA-NYLFLGDYVDRGKQSLET 102 (324)
Q Consensus 28 ~~~~~~i~~l~~~a~~i~~~ep~ll~~~----~~i~vvGDIHG~~~~L~~il~~~~~~~~~-~~vfLGD~VDRG~~s~ev 102 (324)
.+.+..+..|+.+|+++|++.|++-+++ ..|+|+||+||.++||.-+|-+.|+|+.+ .|||.||+||||.+|+||
T Consensus 133 ~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npYvFNGDFVDRGk~siEv 212 (631)
T KOG0377|consen 133 RLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPYVFNGDFVDRGKRSIEV 212 (631)
T ss_pred hccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCeeecCchhhccccchhh
Confidence 6889999999999999999999998875 46999999999999999999999999765 599999999999999999
Q ss_pred HHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHh---cHHHHHHHHHhhhcCCeEEEEcCcEEEecCCCCCCc
Q psy16875 103 ICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY---NIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDL 179 (324)
Q Consensus 103 l~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~---~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~ 179 (324)
|..|+++.+.||..+++-|||||...+|..|||..|+..+| +.++...+.++|+.||++.+|+.+||+||||+|. .
T Consensus 213 LmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd-~ 291 (631)
T KOG0377|consen 213 LMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIIDSRILVVHGGISD-S 291 (631)
T ss_pred HHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhcccceEEEecCccc-c
Confidence 99999999999999999999999999999999999999999 5688899999999999999999999999999964 4
Q ss_pred ccHHHHHhhc--------CCCC-C-------------CCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHh
Q psy16875 180 QMMEQIRRIM--------RPTD-V-------------PDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHN 237 (324)
Q Consensus 180 ~~~~~i~~i~--------r~~~-~-------------~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~ 237 (324)
+.++-+.+|. ||.. . ..+..+.|+|||||.....+|++.-||.|++||++++.+||++
T Consensus 292 Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk 371 (631)
T KOG0377|consen 292 TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQK 371 (631)
T ss_pred hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHH
Confidence 4455554443 3321 1 1245789999999998877888888999999999999999999
Q ss_pred CCCcEEEEeecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEEcCCcceEEEEEcc
Q psy16875 238 HDLDLICRAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKP 297 (324)
Q Consensus 238 ~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 297 (324)
++++++||+|||.++||++.++++|+|||||+||.-..+|+||++++...+.-.|.+...
T Consensus 372 ~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a 431 (631)
T KOG0377|consen 372 HRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQA 431 (631)
T ss_pred hCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHHh
Confidence 999999999999999999999999999999999987788999999999999877776553
No 18
>KOG0376|consensus
Probab=100.00 E-value=1.6e-48 Score=376.70 Aligned_cols=277 Identities=40% Similarity=0.793 Sum_probs=257.1
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeecC----CEEEEeccCCCHHHHHHHHHhCCCCCC-ceEEEeCcccCCCCCcHHHH
Q psy16875 29 MSEAEVRGLCLKSREIFLQQPILLELEA----PLKICGDIHGQYTDLLRLFEYGGFPPD-ANYLFLGDYVDRGKQSLETI 103 (324)
Q Consensus 29 ~~~~~i~~l~~~a~~i~~~ep~ll~~~~----~i~vvGDIHG~~~~L~~il~~~~~~~~-~~~vfLGD~VDRG~~s~evl 103 (324)
++..-+-+|+..+..+++++|++++++. .+.|+||+||++.++.+++...|.++. ..|+|.||+||||..|.|+.
T Consensus 183 L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~~ 262 (476)
T KOG0376|consen 183 LPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEVI 262 (476)
T ss_pred cccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceeee
Confidence 4445667899999999999999998864 489999999999999999999998875 56999999999999999999
Q ss_pred HHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEEEEcCcEEEecCCCCC-CcccH
Q psy16875 104 CLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSP-DLQMM 182 (324)
Q Consensus 104 ~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p-~~~~~ 182 (324)
..+++.|+.+|++++++|||||...++..|||..++..+|.++.+..+.+.|..||++..++++++.+|||+.. .-.++
T Consensus 263 ~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~l 342 (476)
T KOG0376|consen 263 LTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVTL 342 (476)
T ss_pred eeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999854 45689
Q ss_pred HHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceE
Q psy16875 183 EQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQL 262 (324)
Q Consensus 183 ~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~ 262 (324)
+++++|.|+...++.+..++++||||.. ..|..++.||.|..||+++++.||+.|+++.|||||++.+.||++.++|+|
T Consensus 343 ~d~r~i~r~~~~~~~~~~~~~lws~pq~-~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~l 421 (476)
T KOG0376|consen 343 EDFRNIDRFEQPPEEGLMCELLWSDPQP-ANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGKL 421 (476)
T ss_pred HHHHhhhhccCCcccccccccccCCCcc-ccCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCcE
Confidence 9999999998888999999999999986 488999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCCCcEEEEEEc-CCcceEEEEEccCcccccccc
Q psy16875 263 VTLFSAPNYCGEFDNAGGMMSVD-ETLMCSFQILKPSEKKAKYQY 306 (324)
Q Consensus 263 itifSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~~~~~~~~~~~~ 306 (324)
+|||||||||..++|.||++.++ +++...++.|.+.+...-+-+
T Consensus 422 ~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~~~m 466 (476)
T KOG0376|consen 422 ITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDVKPM 466 (476)
T ss_pred EEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCCCCCc
Confidence 99999999999999999999998 788889999998876654433
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=1.2e-36 Score=274.68 Aligned_cols=214 Identities=50% Similarity=0.855 Sum_probs=178.7
Q ss_pred EEEeccCCCHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHH
Q psy16875 59 KICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDE 138 (324)
Q Consensus 59 ~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e 138 (324)
+|||||||++++|.++++..+..+.+.+||||||||||+.+.+++.+++.++.. |.++++||||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999888899999999999999999999999999877 8899999999999988766665443
Q ss_pred H---------HHHhcHHHHHHHHHhhhcCCeEEEEcC-cEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCC
Q psy16875 139 C---------KRRYNIKLWKTFTDCFNCLPIAAIIDE-KIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDP 208 (324)
Q Consensus 139 ~---------~~~~~~~~~~~~~~~f~~LPla~~i~~-~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP 208 (324)
. .......++..+..++..||+++.++. +++|||||++|......++. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 223345678888999999999999986 89999999999887666554 2334456778999999
Q ss_pred CCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEE
Q psy16875 209 DKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMS 283 (324)
Q Consensus 209 ~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~ 283 (324)
.........+.++. ++++++.|++.++.+.|||||+++..|+.....++++||+|++.|++..+|..+++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 85444344444444 999999999999999999999999999876678899999999999877677776653
No 20
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.95 E-value=1.2e-26 Score=208.63 Aligned_cols=176 Identities=19% Similarity=0.339 Sum_probs=130.3
Q ss_pred EEEeccCCCHHHHHHHHHhCCC--------CCCceEEEeCcccCCCCCcHHHHHHHHHhhhh---CCCcEEEECCCcccc
Q psy16875 59 KICGDIHGQYTDLLRLFEYGGF--------PPDANYLFLGDYVDRGKQSLETICLLLAYKIK---YPENFFLLRGNHECA 127 (324)
Q Consensus 59 ~vvGDIHG~~~~L~~il~~~~~--------~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~---~p~~v~~LrGNHE~~ 127 (324)
+|||||||++++|+++|+.+++ .+.+.+||+||+||||+++.++++++++++.+ .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35678999999999999999999999998754 467899999999999
Q ss_pred hhhhhccchH--HHHHHhc-----HHHH---HHHHHhhhcCCeEEEEcCcEEEecCCCCCCcccHHHHHhhcCCCCCCCc
Q psy16875 128 SINRIYGFYD--ECKRRYN-----IKLW---KTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDT 197 (324)
Q Consensus 128 ~~~~~~gf~~--e~~~~~~-----~~~~---~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~ 197 (324)
.++..+.+.. ....... ...+ ..+.+|++.+|+...+++ ++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~~-~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVND-TLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEECC-EEEEeCCcHH--------------------
Confidence 8875443321 1111100 1111 345889999999999874 8889999822
Q ss_pred hhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecCC
Q psy16875 198 GLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAP 269 (324)
Q Consensus 198 ~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~ 269 (324)
+|+..-.... ...+ =+...++++++.++.++||+||++++.|....+++++|+|.++.
T Consensus 140 ------~w~r~y~~~~---~~~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~ 197 (208)
T cd07425 140 ------LWYRGYSKET---SDKE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGM 197 (208)
T ss_pred ------HHhhHhhhhh---hhcc-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCc
Confidence 3321100000 0000 01256889999999999999999999887668899999999854
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.94 E-value=2.4e-26 Score=211.62 Aligned_cols=193 Identities=21% Similarity=0.303 Sum_probs=130.4
Q ss_pred CEEEEeccCCCHHHHHHHHHhCCCC---------CCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccc
Q psy16875 57 PLKICGDIHGQYTDLLRLFEYGGFP---------PDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 57 ~i~vvGDIHG~~~~L~~il~~~~~~---------~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 127 (324)
+++||||||||++.|.++|+.+++. ..+++|||||||||||+|.+|+++++++. .+.++++||||||.+
T Consensus 2 ~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~~ 79 (245)
T PRK13625 2 KYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCNK 79 (245)
T ss_pred ceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHHH
Confidence 6899999999999999999998874 45789999999999999999999999884 456899999999998
Q ss_pred hhhhhccc-------hHHHHHHh-------cHHHHHHHHHhhhcCCeEEEEc-CcEEEecCCCCCCcccHHHHHhhcCCC
Q psy16875 128 SINRIYGF-------YDECKRRY-------NIKLWKTFTDCFNCLPIAAIID-EKIFCCHGGLSPDLQMMEQIRRIMRPT 192 (324)
Q Consensus 128 ~~~~~~gf-------~~e~~~~~-------~~~~~~~~~~~f~~LPla~~i~-~~il~vHgGi~p~~~~~~~i~~i~r~~ 192 (324)
.++...+- ..+....| ...+.+.+.+|+++||++..++ ++++|||||+.|..... +
T Consensus 80 ~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~--------~- 150 (245)
T PRK13625 80 LYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGR--------Q- 150 (245)
T ss_pred HHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhccc--------c-
Confidence 77643221 11122222 1346678899999999998874 57999999998763110 0
Q ss_pred CCCCchhHHHHhhcCCCC--------CCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEE
Q psy16875 193 DVPDTGLLCDLLWSDPDK--------DVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVT 264 (324)
Q Consensus 193 ~~~~~~~~~dllWsDP~~--------~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~it 264 (324)
...+...++|++-.. ....|..+. .+...+|-||+++..... .+..+-
T Consensus 151 ---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~g~~~vV~GHtp~~~~~~---~~~~i~ 206 (245)
T PRK13625 151 ---DKKVQTFVLYGDITGEKHPDGSPVRRDWAKEY------------------KGTAWIVYGHTPVKEPRF---VNHTVN 206 (245)
T ss_pred ---hhhhhhHHhhccccCCcCCCCCeeeeccchhc------------------CCCcEEEECCCCCcccee---cCCeEE
Confidence 011223456654221 111121111 245579999999874332 234677
Q ss_pred EecCCCCCCCCCCcEEEEEEcCCc
Q psy16875 265 LFSAPNYCGEFDNAGGMMSVDETL 288 (324)
Q Consensus 265 ifSa~~y~~~~~n~ga~l~i~~~~ 288 (324)
|-+..-|. +.=..+.+.+..
T Consensus 207 IDtGa~~g----G~Ltal~l~~~~ 226 (245)
T PRK13625 207 IDTGCVFG----GRLTALRYPEME 226 (245)
T ss_pred EECcCccC----CEEEEEECCCCc
Confidence 87776442 333445565543
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.92 E-value=2.4e-24 Score=195.64 Aligned_cols=115 Identities=23% Similarity=0.384 Sum_probs=91.6
Q ss_pred EEEeccCCCHHHHHHHHHhCCCC--------CCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhh
Q psy16875 59 KICGDIHGQYTDLLRLFEYGGFP--------PDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASIN 130 (324)
Q Consensus 59 ~vvGDIHG~~~~L~~il~~~~~~--------~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~ 130 (324)
+||||||||++.|.++|+.+++. +.+.+|||||||||||+|.+|+++|+++.. +.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 68999999999999999998775 467899999999999999999999999863 35799999999998775
Q ss_pred hhcc------------ch-----HHHHHHhc--HHHHHHHHHhhhcCCeEEEEcCcEEEecCCCC
Q psy16875 131 RIYG------------FY-----DECKRRYN--IKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLS 176 (324)
Q Consensus 131 ~~~g------------f~-----~e~~~~~~--~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~ 176 (324)
...+ .. .+..+.+. .+.++.+.+||++||++...+ +++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~~-~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDLG-GVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEEC-CEEEEECCcC
Confidence 3221 00 12222222 345678899999999999875 5899999975
No 23
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.92 E-value=7.3e-24 Score=197.91 Aligned_cols=218 Identities=18% Similarity=0.314 Sum_probs=143.2
Q ss_pred CEEEEeccCCCHHHHHHHHHhCCCC-CCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccc
Q psy16875 57 PLKICGDIHGQYTDLLRLFEYGGFP-PDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 135 (324)
Q Consensus 57 ~i~vvGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf 135 (324)
+++||||||||+++|.++|+.+++. ..+.++||||+|||||+|.+|+.++.++ +.++++|+||||.+.+...+|.
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g~ 77 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAGI 77 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcCC
Confidence 5899999999999999999999874 4578999999999999999999999886 3579999999999888766664
Q ss_pred hH-----HHHHHhcHHHHHHHHHhhhcCCeEEEE-cCcEEEecCCCCCCcccHHHH---HhhcCCCCCCC-chhHHHHhh
Q psy16875 136 YD-----ECKRRYNIKLWKTFTDCFNCLPIAAII-DEKIFCCHGGLSPDLQMMEQI---RRIMRPTDVPD-TGLLCDLLW 205 (324)
Q Consensus 136 ~~-----e~~~~~~~~~~~~~~~~f~~LPla~~i-~~~il~vHgGi~p~~~~~~~i---~~i~r~~~~~~-~~~~~dllW 205 (324)
.. ...........+.+.+|++++|+...+ ++++++||||++|.+...+.+ +++...+..++ ...+..+.|
T Consensus 78 ~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my~ 157 (275)
T PRK00166 78 KRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMYG 157 (275)
T ss_pred ccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhcC
Confidence 31 111111223456688999999999987 567999999999987432221 12222222222 235555555
Q ss_pred cCCCCCCCCcccCCCCC-ceecCHHHH--HHHHHh-----------------------------CCCcEEEEeecccccC
Q psy16875 206 SDPDKDVQGWGENDRGV-SFTFGADVV--SKFLHN-----------------------------HDLDLICRAHQVVDDG 253 (324)
Q Consensus 206 sDP~~~~~~~~~~~rg~-~~~fg~~~~--~~fl~~-----------------------------~~~~~iIRgH~~~~~G 253 (324)
+.|.. |.++-.|. ...|.-.++ -+||.. ..-..||-||.....|
T Consensus 158 ~~p~~----W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G 233 (275)
T PRK00166 158 NEPDR----WSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEG 233 (275)
T ss_pred CCcCc----cCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCC
Confidence 55532 33322221 011111111 011111 1234799999998778
Q ss_pred ceEEcCceEEEEecCCCCCCCCCCcEEEEEEcCCc
Q psy16875 254 YEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETL 288 (324)
Q Consensus 254 ~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~~ 288 (324)
... ...++.+-|.--+ +++=..+++++.-
T Consensus 234 ~~~--~~~~~~LDtGcvw----gg~Lta~~l~~~~ 262 (275)
T PRK00166 234 LTT--PPNIIALDTGCVW----GGKLTALRLEDKQ 262 (275)
T ss_pred ccC--CCCeEEeeccccc----CCeEEEEEeCCCc
Confidence 875 4568888887654 2444457776544
No 24
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.92 E-value=2.9e-24 Score=196.36 Aligned_cols=120 Identities=27% Similarity=0.514 Sum_probs=96.9
Q ss_pred CCEEEEeccCCCHHHHHHHHHhCCCCC----------CceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcc
Q psy16875 56 APLKICGDIHGQYTDLLRLFEYGGFPP----------DANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125 (324)
Q Consensus 56 ~~i~vvGDIHG~~~~L~~il~~~~~~~----------~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE 125 (324)
.||.||||||||+.+|+++|+.+++.+ .++++|||||||||++|.||+++|++++.. .++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 379999999999999999999997753 358999999999999999999999988643 46999999999
Q ss_pred cchhhhhc--------cchHHHHHHh---cHHHHHHHHHhhhcCCeEEEEc-CcEEEecCCCCCC
Q psy16875 126 CASINRIY--------GFYDECKRRY---NIKLWKTFTDCFNCLPIAAIID-EKIFCCHGGLSPD 178 (324)
Q Consensus 126 ~~~~~~~~--------gf~~e~~~~~---~~~~~~~~~~~f~~LPla~~i~-~~il~vHgGi~p~ 178 (324)
.+.++... |+. +....+ ..++.+.+.+||+.||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~~-~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLE-ETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCccc-chHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 98876432 222 222223 2456778899999999999875 4799999998764
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.91 E-value=4e-24 Score=197.80 Aligned_cols=119 Identities=26% Similarity=0.378 Sum_probs=98.8
Q ss_pred EEEEeccCCCHHHHHHHHHhCCCC-CCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccch
Q psy16875 58 LKICGDIHGQYTDLLRLFEYGGFP-PDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 136 (324)
Q Consensus 58 i~vvGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~ 136 (324)
++||||||||+++|+++|+.+++. +.+.++|+||||||||+|.||+.++++++ .++++|+||||.+.++..+|+.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 489999999999999999999876 56889999999999999999999999886 5799999999999887666643
Q ss_pred HH-----HHHHhcHHHHHHHHHhhhcCCeEEEEcC-cEEEecCCCCCCcc
Q psy16875 137 DE-----CKRRYNIKLWKTFTDCFNCLPIAAIIDE-KIFCCHGGLSPDLQ 180 (324)
Q Consensus 137 ~e-----~~~~~~~~~~~~~~~~f~~LPla~~i~~-~il~vHgGi~p~~~ 180 (324)
.. ....+.....+.+.+|++++|++..+++ ++++|||||+|.+.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 21 1111222344678899999999999875 79999999999874
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.91 E-value=1.1e-23 Score=195.83 Aligned_cols=120 Identities=23% Similarity=0.373 Sum_probs=101.2
Q ss_pred CEEEEeccCCCHHHHHHHHHhCCCC-CCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccc
Q psy16875 57 PLKICGDIHGQYTDLLRLFEYGGFP-PDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 135 (324)
Q Consensus 57 ~i~vvGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf 135 (324)
+++||||||||+++|.++|+++++. ..+.++|+||+|||||+|+||+.++.++. .++++|+||||...+...+|+
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g~ 77 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAGI 77 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcCC
Confidence 5899999999999999999999876 46789999999999999999999998874 568899999999998877775
Q ss_pred h-----HHHHHHhcHHHHHHHHHhhhcCCeEEEEc-CcEEEecCCCCCCcc
Q psy16875 136 Y-----DECKRRYNIKLWKTFTDCFNCLPIAAIID-EKIFCCHGGLSPDLQ 180 (324)
Q Consensus 136 ~-----~e~~~~~~~~~~~~~~~~f~~LPla~~i~-~~il~vHgGi~p~~~ 180 (324)
. +.....+.....+.+.+|++++|+....+ .++++||||++|.+.
T Consensus 78 ~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 78 SRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 2 23333344566688999999999998764 369999999999885
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.90 E-value=3.5e-23 Score=187.38 Aligned_cols=115 Identities=26% Similarity=0.325 Sum_probs=89.5
Q ss_pred CCEEEEeccCCCHHHHHHHHHhCCCC-CCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhcc
Q psy16875 56 APLKICGDIHGQYTDLLRLFEYGGFP-PDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 134 (324)
Q Consensus 56 ~~i~vvGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~g 134 (324)
++++|||||||++++|+++|+.+++. ..++++||||+|||||+|.+|+++|.+ .++++|+||||.+.++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHC
Confidence 48999999999999999999999886 567899999999999999999999865 25789999999988864321
Q ss_pred chH--------HHHHHh---cHHHHHHHHHhhhcCCeEEEEc---CcEEEecCCCC
Q psy16875 135 FYD--------ECKRRY---NIKLWKTFTDCFNCLPIAAIID---EKIFCCHGGLS 176 (324)
Q Consensus 135 f~~--------e~~~~~---~~~~~~~~~~~f~~LPla~~i~---~~il~vHgGi~ 176 (324)
-.. +....+ ..+.+..+.+|+++||+...+. +++++||||++
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 100 000111 1234566779999999998763 46999999973
No 28
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.89 E-value=2.5e-22 Score=187.20 Aligned_cols=133 Identities=26% Similarity=0.355 Sum_probs=102.3
Q ss_pred CCEEEEeccCCCHHHHHHHHHhCCCC------CCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCC-cEEEECCCcccch
Q psy16875 56 APLKICGDIHGQYTDLLRLFEYGGFP------PDANYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECAS 128 (324)
Q Consensus 56 ~~i~vvGDIHG~~~~L~~il~~~~~~------~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~-~v~~LrGNHE~~~ 128 (324)
.++++||||||+++.|.++|+.+... ..+.+|||||||||||+|.+|+++|++++..+|. ++++|+||||.++
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 36899999999999999999865421 2456999999999999999999999999888876 6899999999876
Q ss_pred hhhhcc---------ch------------------------------------------------------HHHHHHhcH
Q psy16875 129 INRIYG---------FY------------------------------------------------------DECKRRYNI 145 (324)
Q Consensus 129 ~~~~~g---------f~------------------------------------------------------~e~~~~~~~ 145 (324)
+..... |. .+....|+.
T Consensus 82 l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv 161 (304)
T cd07421 82 AAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGV 161 (304)
T ss_pred HhHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCC
Confidence 542211 00 112233321
Q ss_pred ---------HHHHHHHHhhhcCCeEEEEcCcE-------------EEecCCCCCCcccHHHHHhhc
Q psy16875 146 ---------KLWKTFTDCFNCLPIAAIIDEKI-------------FCCHGGLSPDLQMMEQIRRIM 189 (324)
Q Consensus 146 ---------~~~~~~~~~f~~LPla~~i~~~i-------------l~vHgGi~p~~~~~~~i~~i~ 189 (324)
.+-+...+|++.||.....++ + +|||||+.|..+..+|.+.+.
T Consensus 162 ~~~~~~l~~avP~~H~~fl~~l~~~~~~~~-~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~ 226 (304)
T cd07421 162 PHGSSDLIKAVPEEHKKFLRNLVWVHEEDD-VCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLR 226 (304)
T ss_pred CcchHHHHHhCCHHHHHHHHhCCceEEeCc-ccccccccccccceEEEEcccCCCCChHHhhhhhh
Confidence 233567899999999988654 5 899999999999888887753
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.89 E-value=2.2e-22 Score=180.61 Aligned_cols=180 Identities=22% Similarity=0.297 Sum_probs=120.1
Q ss_pred CCEEEEeccCCCHHHHHHHHHhCCCC-CCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhcc
Q psy16875 56 APLKICGDIHGQYTDLLRLFEYGGFP-PDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 134 (324)
Q Consensus 56 ~~i~vvGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~g 134 (324)
++++|||||||++.+|+++++..++. ..+.++|+|||||||+++.|++.++.. .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998875 467788999999999999999998865 35899999999998876544
Q ss_pred c--hHHHHHHh---------cHHHHHHHHHhhhcCCeEEEEc---CcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhH
Q psy16875 135 F--YDECKRRY---------NIKLWKTFTDCFNCLPIAAIID---EKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLL 200 (324)
Q Consensus 135 f--~~e~~~~~---------~~~~~~~~~~~f~~LPla~~i~---~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~ 200 (324)
- ..+..... ..+.++.+.+||++||+...++ .++++||||+++... ...+.. +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~~-----~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVGA-----VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhhc-----cccCcccc
Confidence 1 11221111 1225566888999999999874 369999999865432 111110 11122334
Q ss_pred HHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecCC
Q psy16875 201 CDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAP 269 (324)
Q Consensus 201 ~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~ 269 (324)
.+++|+++...... +...-+.+.||.||++.+.-+.. ++ .+-|-..+
T Consensus 149 ~~~~w~~~~~~~~~-------------------~~~~~~~~~iV~GHTh~~~~~~~--~~-~i~ID~Gs 195 (207)
T cd07424 149 EELLWSRTRIQKAQ-------------------TQPIKGVDAVVHGHTPVKRPLRL--GN-VLYIDTGA 195 (207)
T ss_pred eeeeeccchhhhcC-------------------ccccCCCCEEEECCCCCCcceEE--CC-EEEEECCC
Confidence 56788765421000 00111457899999998754332 33 34444444
No 30
>PHA02239 putative protein phosphatase
Probab=99.88 E-value=2.3e-22 Score=184.00 Aligned_cols=171 Identities=25% Similarity=0.314 Sum_probs=119.6
Q ss_pred CEEEEeccCCCHHHHHHHHHhCCCC--CCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhcc
Q psy16875 57 PLKICGDIHGQYTDLLRLFEYGGFP--PDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 134 (324)
Q Consensus 57 ~i~vvGDIHG~~~~L~~il~~~~~~--~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~g 134 (324)
++++||||||++..|.++++.+... +.+.+||+|||||||++|.+++..++.+.. .+.++++|+||||.+.+....+
T Consensus 2 ~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~~ 80 (235)
T PHA02239 2 AIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIMEN 80 (235)
T ss_pred eEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHhC
Confidence 6899999999999999999987533 467899999999999999999999998753 4567999999999986542210
Q ss_pred -----ch---------HHHHHHhc-------------------------------HHHHHHHHHhhhcCCeEEEEcCcEE
Q psy16875 135 -----FY---------DECKRRYN-------------------------------IKLWKTFTDCFNCLPIAAIIDEKIF 169 (324)
Q Consensus 135 -----f~---------~e~~~~~~-------------------------------~~~~~~~~~~f~~LPla~~i~~~il 169 (324)
.. .+....|+ ...+..+..|+++||+....+ +++
T Consensus 81 ~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~-~~i 159 (235)
T PHA02239 81 VDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKED-KYI 159 (235)
T ss_pred chhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEEC-CEE
Confidence 00 11122231 113355667999999999965 589
Q ss_pred EecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecc
Q psy16875 170 CCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQV 249 (324)
Q Consensus 170 ~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~ 249 (324)
|||||+.|..+..+| ...+++|... . .+ ...-+.||-||++
T Consensus 160 fVHAGi~p~~~~~~q--------------~~~~llWiR~-f-----~~-------------------~~~g~~vV~GHTp 200 (235)
T PHA02239 160 FSHSGGVSWKPVEEQ--------------TIDQLIWSRD-F-----QP-------------------RKDGFTYVCGHTP 200 (235)
T ss_pred EEeCCCCCCCChhhC--------------CHhHeEEecc-c-----CC-------------------CCCCcEEEECCCC
Confidence 999999887542222 2347899763 1 10 1123478999999
Q ss_pred cccCceEEcCceEEEEecCC
Q psy16875 250 VDDGYEFFAKRQLVTLFSAP 269 (324)
Q Consensus 250 ~~~G~~~~~~~~~itifSa~ 269 (324)
+.++..... ++.|.|.+..
T Consensus 201 ~~~~~~~~~-~~~I~IDtGa 219 (235)
T PHA02239 201 TDSGEVEIN-GDMLMCDVGA 219 (235)
T ss_pred CCCCccccc-CCEEEeecCc
Confidence 976543332 3457777654
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.85 E-value=5.6e-21 Score=173.07 Aligned_cols=115 Identities=25% Similarity=0.310 Sum_probs=86.7
Q ss_pred CCEEEEeccCCCHHHHHHHHHhCCCC-CCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhcc
Q psy16875 56 APLKICGDIHGQYTDLLRLFEYGGFP-PDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 134 (324)
Q Consensus 56 ~~i~vvGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~g 134 (324)
+|++||||||||+++|+++|+.+.+. ..+.++||||+|||||+|.+|+++|.+ .++++||||||.+.+.....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 58999999999999999999998865 457788999999999999999998854 36899999999988753311
Q ss_pred ch-H-------HHHHHhc---HHHHHHHHHhhhcCCeEEEEc---CcEEEecCCCC
Q psy16875 135 FY-D-------ECKRRYN---IKLWKTFTDCFNCLPIAAIID---EKIFCCHGGLS 176 (324)
Q Consensus 135 f~-~-------e~~~~~~---~~~~~~~~~~f~~LPla~~i~---~~il~vHgGi~ 176 (324)
-. . +....+. ......+..|+++||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 00 0 0001111 123344567999999998763 46899999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.45 E-value=1.5e-12 Score=107.96 Aligned_cols=158 Identities=23% Similarity=0.270 Sum_probs=102.7
Q ss_pred CEEEEeccCCCHHHH----HHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHH--HHhhhhCCCcEEEECCCcccchhh
Q psy16875 57 PLKICGDIHGQYTDL----LRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLL--LAYKIKYPENFFLLRGNHECASIN 130 (324)
Q Consensus 57 ~i~vvGDIHG~~~~L----~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll--~~lk~~~p~~v~~LrGNHE~~~~~ 130 (324)
+|++|||+|+..... ..+.........+.+|++||++++|..+.+..... .......+..+++++||||.....
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~ 81 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGN 81 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHH
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccceec
Confidence 689999999999987 34444444455677889999999999988877654 444555677899999999998765
Q ss_pred hhccchHHHHH----------------------------------HhcHHHHHHHHHhhhcCCeEEEEcCcEEEecCCCC
Q psy16875 131 RIYGFYDECKR----------------------------------RYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLS 176 (324)
Q Consensus 131 ~~~gf~~e~~~----------------------------------~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~ 176 (324)
..+........ ............+.............|+++|.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~ 161 (200)
T PF00149_consen 82 SFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPY 161 (200)
T ss_dssp HHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSS
T ss_pred cccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCCC
Confidence 33322211110 00111112222333333334444567999999986
Q ss_pred CCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeeccc
Q psy16875 177 PDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVV 250 (324)
Q Consensus 177 p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~ 250 (324)
+........ .....+.+.+..++++.++++++.||+..
T Consensus 162 ~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 162 SSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp TTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred Ccccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 543322111 13456778999999999999999999864
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.27 E-value=2.1e-10 Score=97.57 Aligned_cols=82 Identities=26% Similarity=0.361 Sum_probs=63.0
Q ss_pred CEEEEeccCCCHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccch
Q psy16875 57 PLKICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 136 (324)
Q Consensus 57 ~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~ 136 (324)
++.++||+||+...+.++++.+.. .+.++++||++++++... + .....+++++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 588999999999999999998654 677889999999998765 1 122459999999998542
Q ss_pred HHHHHHhcHHHHHHHHHhhhcCCeEEEE--c-CcEEEecCCC
Q psy16875 137 DECKRRYNIKLWKTFTDCFNCLPIAAII--D-EKIFCCHGGL 175 (324)
Q Consensus 137 ~e~~~~~~~~~~~~~~~~f~~LPla~~i--~-~~il~vHgGi 175 (324)
+..+|....+ + .+++++||..
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~ 85 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHL 85 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCcc
Confidence 3556655444 3 3699999975
No 34
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.22 E-value=2.2e-10 Score=96.77 Aligned_cols=150 Identities=19% Similarity=0.261 Sum_probs=92.0
Q ss_pred CEEEEeccCCCHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccch
Q psy16875 57 PLKICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 136 (324)
Q Consensus 57 ~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~ 136 (324)
+|+++||+|++..++.++++.+ ...+.++++||++++ .++++.+..+ .+++++||||...........
T Consensus 2 ki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~~ 69 (156)
T PF12850_consen 2 KIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDEE 69 (156)
T ss_dssp EEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECTC
T ss_pred EEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhcc
Confidence 7899999999999999999988 346678889999993 6777766544 599999999975533222110
Q ss_pred HHHHHHhcHHHHHHHHHhhhcCCeEEEEcCcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcc
Q psy16875 137 DECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWG 216 (324)
Q Consensus 137 ~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~ 216 (324)
. +.......+ -+.+++++||....
T Consensus 70 ~----------------~~~~~~~~~-~~~~i~~~H~~~~~--------------------------------------- 93 (156)
T PF12850_consen 70 Y----------------LLDALRLTI-DGFKILLSHGHPYD--------------------------------------- 93 (156)
T ss_dssp S----------------SHSEEEEEE-TTEEEEEESSTSSS---------------------------------------
T ss_pred c----------------cccceeeee-cCCeEEEECCCCcc---------------------------------------
Confidence 0 111111111 14579999997533
Q ss_pred cCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEE
Q psy16875 217 ENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSV 284 (324)
Q Consensus 217 ~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i 284 (324)
...+.+.+.+.+...+.++++-||.-.+.-.+ ..+..+++.-|...... +...+++.+
T Consensus 94 -------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~~~~~~--~~~~~~~i~ 151 (156)
T PF12850_consen 94 -------VQWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSIGGPRH--GDQSGYAIL 151 (156)
T ss_dssp -------STTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GSSS-SS--SSSEEEEEE
T ss_pred -------cccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcCCCCCC--CCCCEEEEE
Confidence 01345567778889999999999998753333 34555666655443221 224555544
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.16 E-value=9.4e-10 Score=94.31 Aligned_cols=62 Identities=16% Similarity=0.142 Sum_probs=48.4
Q ss_pred CEEEEeccCCCHHHHHHHHHhCCCC-CCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccc
Q psy16875 57 PLKICGDIHGQYTDLLRLFEYGGFP-PDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 57 ~i~vvGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 127 (324)
++.|+||+||++.++..+++..... ..+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 2 ~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 2 KILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred EEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 6899999999998887777665554 567788999998 457777665542 3599999999983
No 36
>PRK09453 phosphodiesterase; Provisional
Probab=99.14 E-value=2e-10 Score=100.93 Aligned_cols=68 Identities=24% Similarity=0.329 Sum_probs=54.9
Q ss_pred CEEEEeccCCCHHHHHHHHHhCCCCCCceEEEeCcccCCCCC--------cHHHHHHHHHhhhhCCCcEEEECCCcccch
Q psy16875 57 PLKICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQ--------SLETICLLLAYKIKYPENFFLLRGNHECAS 128 (324)
Q Consensus 57 ~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~--------s~evl~ll~~lk~~~p~~v~~LrGNHE~~~ 128 (324)
++.++||+||++.++.++++.+...+.+.++++||++|+|+. +.+++..+..+ +..+++++||||...
T Consensus 2 ri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~~ 77 (182)
T PRK09453 2 KLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSEV 77 (182)
T ss_pred eEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcchh
Confidence 689999999999999999988755667889999999999873 45666666443 246999999999753
No 37
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.05 E-value=2.3e-10 Score=94.70 Aligned_cols=143 Identities=41% Similarity=0.705 Sum_probs=117.6
Q ss_pred hhhhccchHHHHHHhcHH-HHHH---HHHhhhcCCeEEEEcC-cEEEecCCCCCCc-ccHHHHHhhcCCC--CCCCchhH
Q psy16875 129 INRIYGFYDECKRRYNIK-LWKT---FTDCFNCLPIAAIIDE-KIFCCHGGLSPDL-QMMEQIRRIMRPT--DVPDTGLL 200 (324)
Q Consensus 129 ~~~~~gf~~e~~~~~~~~-~~~~---~~~~f~~LPla~~i~~-~il~vHgGi~p~~-~~~~~i~~i~r~~--~~~~~~~~ 200 (324)
++..+++..++...++.. .|.. ...+|+.+|+.+.+++ .++|.|++++|.. ...++++.+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 345567777766666544 5665 8999999999999988 8999999999976 6788887777655 55666777
Q ss_pred HHHhhcCCCCC-CCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecCCCCC
Q psy16875 201 CDLLWSDPDKD-VQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAPNYC 272 (324)
Q Consensus 201 ~dllWsDP~~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~~y~ 272 (324)
.+.+|+++... ...|.++.+|.+..| .+....|+..+..+.+.++|+..+.++...+++..+|.|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 77799999873 688999999998877 788889998888888999999999999988776789999999986
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.00 E-value=2.7e-09 Score=89.03 Aligned_cols=118 Identities=18% Similarity=0.186 Sum_probs=79.0
Q ss_pred CEEEEeccCCCHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcH--HHHHHHHHhhhhCCCcEEEECCCcccchhhhhcc
Q psy16875 57 PLKICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHECASINRIYG 134 (324)
Q Consensus 57 ~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~--evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~g 134 (324)
++.++||+||++. .......+.++++||+++++..+. +.+.++..+. . ..+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcCC-----
Confidence 4889999999977 122344567888999999886432 2344444332 1 236789999996421
Q ss_pred chHHHHHHhcHHHHHHHHHhhhcCCeEEEEcCcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCC
Q psy16875 135 FYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQG 214 (324)
Q Consensus 135 f~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~ 214 (324)
.-+.+++++||.+.+.... .+
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~~~----------------------~~--------- 86 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHLDL----------------------VS--------- 86 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCccc----------------------cc---------
Confidence 1144699999963211000 00
Q ss_pred cccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCce
Q psy16875 215 WGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYE 255 (324)
Q Consensus 215 ~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~ 255 (324)
.....|.+.+.+++++.+.+.+|-||.-.+.|++
T Consensus 87 -------~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 87 -------SGQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred -------cCcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 0124677889999999999999999999988887
No 39
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.92 E-value=8.8e-09 Score=94.37 Aligned_cols=156 Identities=20% Similarity=0.245 Sum_probs=96.1
Q ss_pred CEEEEeccCCCHHHHH-HHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhh---
Q psy16875 57 PLKICGDIHGQYTDLL-RLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI--- 132 (324)
Q Consensus 57 ~i~vvGDIHG~~~~L~-~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~--- 132 (324)
+|+++|||||++.... +.++.. ..+.+|++||+++ .+.+++..+..+ +..+++++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccch
Confidence 6899999999987642 334332 3467889999986 456766666554 2458999999998553200
Q ss_pred -----------------cc------------------------c-hHHHHHHhc-HHHHHHHHHhhhcCCeEEEEcCcEE
Q psy16875 133 -----------------YG------------------------F-YDECKRRYN-IKLWKTFTDCFNCLPIAAIIDEKIF 169 (324)
Q Consensus 133 -----------------~g------------------------f-~~e~~~~~~-~~~~~~~~~~f~~LPla~~i~~~il 169 (324)
++ + ..++...|+ ....+.+...++.++.+......|+
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 00 0 124555553 3455667777888864444344799
Q ss_pred EecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCC----CcEEEE
Q psy16875 170 CCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHD----LDLICR 245 (324)
Q Consensus 170 ~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~----~~~iIR 245 (324)
+.|++++-..... ++|+. ..|.+. +..+|...+.+.++... .++++-
T Consensus 152 iaH~~~~G~g~~~-----------------------~~~cg--~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~f 202 (238)
T cd07397 152 LAHNGPSGLGSDA-----------------------EDPCG--RDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVF 202 (238)
T ss_pred EeCcCCcCCCccc-----------------------ccccc--cccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEe
Confidence 9999975432110 11111 123221 23578888877777655 799999
Q ss_pred eecccc
Q psy16875 246 AHQVVD 251 (324)
Q Consensus 246 gH~~~~ 251 (324)
||--..
T Consensus 203 GH~H~~ 208 (238)
T cd07397 203 GHMHHR 208 (238)
T ss_pred CCccCc
Confidence 987754
No 40
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.89 E-value=6.2e-08 Score=88.23 Aligned_cols=71 Identities=10% Similarity=0.136 Sum_probs=57.6
Q ss_pred CCEEEEeccCCCHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccc
Q psy16875 56 APLKICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 56 ~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 127 (324)
.+|.+++|+||++..+.++++.....+.+.+|++||++++|+..-++..++..+.. .+..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~-l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGE-AHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHh-cCCceEEEcCCCChH
Confidence 46999999999999999999876545667889999999999777777666666542 234599999999975
No 41
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.83 E-value=2.4e-07 Score=81.38 Aligned_cols=125 Identities=19% Similarity=0.195 Sum_probs=80.7
Q ss_pred CEEEEeccC-CCHH-----HHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhh
Q psy16875 57 PLKICGDIH-GQYT-----DLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASIN 130 (324)
Q Consensus 57 ~i~vvGDIH-G~~~-----~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~ 130 (324)
+|.||||.| |.-. .+.++++. .+.+.++.+||+++ .+++.++..++ ..++.++||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~~-- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDENL-- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCccc--
Confidence 478999999 5533 35555543 34577889999987 67777775542 25999999999731
Q ss_pred hhccchHHHHHHhcHHHHHHHHHhhhcCCeEEEE---cCcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcC
Q psy16875 131 RIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAII---DEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSD 207 (324)
Q Consensus 131 ~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i---~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsD 207 (324)
.+|....+ +.+++++||-.-.
T Consensus 67 --------------------------~lp~~~~~~~~g~~i~l~HG~~~~------------------------------ 90 (178)
T cd07394 67 --------------------------NYPETKVITVGQFKIGLIHGHQVV------------------------------ 90 (178)
T ss_pred --------------------------cCCCcEEEEECCEEEEEEECCcCC------------------------------
Confidence 34554443 3479999985200
Q ss_pred CCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecC
Q psy16875 208 PDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSA 268 (324)
Q Consensus 208 P~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa 268 (324)
+ ....+.+.++.+..+.+.+|.||+-.+. .....+..++.--|.
T Consensus 91 ~----------------~~~~~~~~~~~~~~~~dvii~GHTH~p~-~~~~~g~~viNPGSv 134 (178)
T cd07394 91 P----------------WGDPDSLAALQRQLDVDILISGHTHKFE-AFEHEGKFFINPGSA 134 (178)
T ss_pred C----------------CCCHHHHHHHHHhcCCCEEEECCCCcce-EEEECCEEEEECCCC
Confidence 0 0023455666778899999999999863 333334344444444
No 42
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.83 E-value=4.6e-08 Score=78.56 Aligned_cols=118 Identities=24% Similarity=0.340 Sum_probs=83.6
Q ss_pred EEEeccCCCHHHHHHHH--HhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccch
Q psy16875 59 KICGDIHGQYTDLLRLF--EYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 136 (324)
Q Consensus 59 ~vvGDIHG~~~~L~~il--~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~ 136 (324)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999888765 33333445678889999999988877655433333345567999999999
Q ss_pred HHHHHHhcHHHHHHHHHhhhcCCeEEEEcCcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcc
Q psy16875 137 DECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWG 216 (324)
Q Consensus 137 ~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~ 216 (324)
++++|+.+.+.......
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~~-------------------------------- 86 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELSP-------------------------------- 86 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhcc--------------------------------
Confidence 89999986443211000
Q ss_pred cCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceE
Q psy16875 217 ENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEF 256 (324)
Q Consensus 217 ~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~ 256 (324)
........+...+...+...+|.||.-....+..
T Consensus 87 ------~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 87 ------DEDPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred ------cchhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 0001567788899999999999999998766553
No 43
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.75 E-value=7.2e-08 Score=83.77 Aligned_cols=65 Identities=22% Similarity=0.231 Sum_probs=45.6
Q ss_pred EEEEeccCCCHHHHHHHHHhCCCCCCceEEEeCcccCCCCCc-HHHHHHHHHhhhhCCCcEEEECCCcccch
Q psy16875 58 LKICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQS-LETICLLLAYKIKYPENFFLLRGNHECAS 128 (324)
Q Consensus 58 i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s-~evl~ll~~lk~~~p~~v~~LrGNHE~~~ 128 (324)
|+++||+||++..+.. ........+.+|+.||++++|... .+.+..+. ..+..++++.||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~----~~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLL----AIGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHH----hcCCCEEEEcCCCCCHH
Confidence 5789999999999876 222233456788899999998763 33333332 23455999999999754
No 44
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.68 E-value=8.1e-07 Score=81.51 Aligned_cols=205 Identities=16% Similarity=0.214 Sum_probs=103.6
Q ss_pred CEEEEeccCCC------HHHHHHHHHhCCCCCCceEEEeCcccCC--C-----CCcHHHHHHHHHhhhhCCCcEEEECCC
Q psy16875 57 PLKICGDIHGQ------YTDLLRLFEYGGFPPDANYLFLGDYVDR--G-----KQSLETICLLLAYKIKYPENFFLLRGN 123 (324)
Q Consensus 57 ~i~vvGDIHG~------~~~L~~il~~~~~~~~~~~vfLGD~VDR--G-----~~s~evl~ll~~lk~~~p~~v~~LrGN 123 (324)
++++++|+|.. ...+.+.++... ...+.++++||++|. | +...+++.++..++. .+-.+++++||
T Consensus 2 ~i~~iSDlHl~~~~~~~~~~~~~~l~~~~-~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~GN 79 (241)
T PRK05340 2 PTLFISDLHLSPERPAITAAFLRFLRGEA-RQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHGN 79 (241)
T ss_pred cEEEEeecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeCC
Confidence 68999999954 234555554321 245678889999985 2 234566777776653 33469999999
Q ss_pred cccchhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEEEEcC-cEEEecCCCCCCcc-cHHHHHhhcCCC-------CC
Q psy16875 124 HECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDE-KIFCCHGGLSPDLQ-MMEQIRRIMRPT-------DV 194 (324)
Q Consensus 124 HE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~-~il~vHgGi~p~~~-~~~~i~~i~r~~-------~~ 194 (324)
||..... ...+..+. ..+.. |....+++ +++++||-.-+... .....+++-|-. ..
T Consensus 80 HD~~~~~-------~~~~~~g~-------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~~ 144 (241)
T PRK05340 80 RDFLLGK-------RFAKAAGM-------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFLAL 144 (241)
T ss_pred CchhhhH-------HHHHhCCC-------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHHhC
Confidence 9974321 00111110 11111 33334444 59999998654322 222233332210 00
Q ss_pred CCchhHHHHh--hcCCCCCCCCcccCCCCC--ceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecCCC
Q psy16875 195 PDTGLLCDLL--WSDPDKDVQGWGENDRGV--SFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAPN 270 (324)
Q Consensus 195 ~~~~~~~dll--WsDP~~~~~~~~~~~rg~--~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~~ 270 (324)
|. .....+- |+.-+. ..+.+.. -....++.+.+.+++.+++.+|-||.-.+.=.....++.-++-.+-++
T Consensus 145 p~-~~~~~ia~~~~~~s~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgd 218 (241)
T PRK05340 145 PL-SIRLRIAAKMRAKSK-----AANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGD 218 (241)
T ss_pred CH-HHHHHHHHHHHHHHH-----HhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCC
Confidence 00 0000000 000000 0000011 123356778899999999999999998754333322321112122222
Q ss_pred CCCCCCCcEEEEEEcCCc
Q psy16875 271 YCGEFDNAGGMMSVDETL 288 (324)
Q Consensus 271 y~~~~~n~ga~l~i~~~~ 288 (324)
. ...+.++.+++..
T Consensus 219 w----~~~~~~~~~~~~~ 232 (241)
T PRK05340 219 W----HEQGSVLKVDADG 232 (241)
T ss_pred C----CCCCeEEEEECCc
Confidence 2 2347778877653
No 45
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.64 E-value=5e-07 Score=82.40 Aligned_cols=204 Identities=12% Similarity=0.110 Sum_probs=101.0
Q ss_pred EEEEeccCCCH------HHHHHHHHhCCCCCCceEEEeCcccCCC--C---C--cHHHHHHHHHhhhhCCCcEEEECCCc
Q psy16875 58 LKICGDIHGQY------TDLLRLFEYGGFPPDANYLFLGDYVDRG--K---Q--SLETICLLLAYKIKYPENFFLLRGNH 124 (324)
Q Consensus 58 i~vvGDIHG~~------~~L~~il~~~~~~~~~~~vfLGD~VDRG--~---~--s~evl~ll~~lk~~~p~~v~~LrGNH 124 (324)
+++++|+|... ..+.+.+..... ..+.++++||++|.. . . ..++..++..|+. .+..++++.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999542 234444544322 456788899999952 1 1 1345555655543 345699999999
Q ss_pred ccchhhhhccchHHHHHHhcHHHHHHHH-HhhhcCCeEEEE-cCcEEEecCCCCCC-cccHHHHHhhcCC-C------CC
Q psy16875 125 ECASINRIYGFYDECKRRYNIKLWKTFT-DCFNCLPIAAII-DEKIFCCHGGLSPD-LQMMEQIRRIMRP-T------DV 194 (324)
Q Consensus 125 E~~~~~~~~gf~~e~~~~~~~~~~~~~~-~~f~~LPla~~i-~~~il~vHgGi~p~-~~~~~~i~~i~r~-~------~~ 194 (324)
|...-. .+.+... ..+.. |....+ +.+++++||-.-.. -......+++.|- . ..
T Consensus 79 D~~~~~---------------~~~~~~gi~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l 142 (231)
T TIGR01854 79 DFLIGK---------------RFAREAGMTLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHL 142 (231)
T ss_pred chhhhH---------------HHHHHCCCEEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhC
Confidence 974211 0111110 11211 223333 45799999975431 1112222222111 0 00
Q ss_pred C--CchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecCCCCC
Q psy16875 195 P--DTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAPNYC 272 (324)
Q Consensus 195 ~--~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~~y~ 272 (324)
+ ....+...+++..... .. ...-.-....++.+++.++..+++++|.||.-.+.=+.+..++.-.+-.+-.+.
T Consensus 143 ~~~~r~~l~~~~~~~s~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW- 217 (231)
T TIGR01854 143 PLAVRVKLARKIRAESRAD-KQ---MKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDW- 217 (231)
T ss_pred CHHHHHHHHHHHHHHHHHh-cC---CCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCC-
Confidence 1 1122334444432110 00 000011234567889999999999999999987543433323221233333332
Q ss_pred CCCCCcEEEEEEcCC
Q psy16875 273 GEFDNAGGMMSVDET 287 (324)
Q Consensus 273 ~~~~n~ga~l~i~~~ 287 (324)
...+.++.++++
T Consensus 218 ---~~~~~~~~~~~~ 229 (231)
T TIGR01854 218 ---YRQGSILRVDAD 229 (231)
T ss_pred ---ccCCeEEEEcCC
Confidence 223556666654
No 46
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.61 E-value=3e-07 Score=79.16 Aligned_cols=67 Identities=25% Similarity=0.248 Sum_probs=46.7
Q ss_pred EEEEeccCCCHHHHHHHHH-hCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccc
Q psy16875 58 LKICGDIHGQYTDLLRLFE-YGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 58 i~vvGDIHG~~~~L~~il~-~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 127 (324)
+.++||+|++...+...+. .......+.++++||+++++.....+. ++.. ...+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 4689999999887766552 233344566788999999887665543 2222 22445699999999986
No 47
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.55 E-value=9.5e-07 Score=73.51 Aligned_cols=107 Identities=17% Similarity=0.165 Sum_probs=74.5
Q ss_pred EEEeccCCCHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHH
Q psy16875 59 KICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDE 138 (324)
Q Consensus 59 ~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e 138 (324)
.|+||.||..+.+.++... ..+.+.++++||+. .+++..+..++ +..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 3899999998877777664 35567899999973 34555555541 224899999999
Q ss_pred HHHHhcHHHHHHHHHhhhcCCeEEEEcCcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccC
Q psy16875 139 CKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGEN 218 (324)
Q Consensus 139 ~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~ 218 (324)
-+++++|+-+.+.. . .+ .
T Consensus 57 ---------------------------~~Ilv~H~pp~~~~-~------------------------~~---~------- 74 (129)
T cd07403 57 ---------------------------VDILLTHAPPAGIG-D------------------------GE---D------- 74 (129)
T ss_pred ---------------------------cCEEEECCCCCcCc-C------------------------cc---c-------
Confidence 35899997421100 0 00 0
Q ss_pred CCCCceecCHHHHHHHHHhCCCcEEEEeecccccCce
Q psy16875 219 DRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYE 255 (324)
Q Consensus 219 ~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~ 255 (324)
...-|.+++.+++++.+.+.++-||.-.+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 012356788899999999999999999877766
No 48
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.40 E-value=5.8e-06 Score=69.22 Aligned_cols=118 Identities=24% Similarity=0.192 Sum_probs=73.7
Q ss_pred EEEEeccCCCHH----------HHHHHHHhCCCCCCceEEEeCcccCCCCCcH--HHHHHHHHhhhhCCCcEEEECCCcc
Q psy16875 58 LKICGDIHGQYT----------DLLRLFEYGGFPPDANYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHE 125 (324)
Q Consensus 58 i~vvGDIHG~~~----------~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~--evl~ll~~lk~~~p~~v~~LrGNHE 125 (324)
|+.++|+|=... .|.++++.......+.++++||+++.|.... +...++..+.... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899994211 1222444443445577888999999887421 2233344333211 26999999999
Q ss_pred cchhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEEEEcCcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhh
Q psy16875 126 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLW 205 (324)
Q Consensus 126 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllW 205 (324)
. ++++|..+.+....
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~~------------------------ 94 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPGS------------------------ 94 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCcc------------------------
Confidence 7 78899765321100
Q ss_pred cCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceE
Q psy16875 206 SDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEF 256 (324)
Q Consensus 206 sDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~ 256 (324)
+... .. +.+.+.+++++.++++++-||.-.+..+.+
T Consensus 95 ---------~~~~-----~~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 95 ---------GRER-----LL-DAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred ---------cccc-----CC-CHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 0000 01 567889999999999999999998655543
No 49
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.34 E-value=2.5e-05 Score=70.48 Aligned_cols=193 Identities=17% Similarity=0.133 Sum_probs=96.4
Q ss_pred CEEEEeccCCC----HHHH----HHHHHhCCCCCCceEEEeCcccCCCCCcHH--H-HHHHHHhhhhCCCcEEEECCCcc
Q psy16875 57 PLKICGDIHGQ----YTDL----LRLFEYGGFPPDANYLFLGDYVDRGKQSLE--T-ICLLLAYKIKYPENFFLLRGNHE 125 (324)
Q Consensus 57 ~i~vvGDIHG~----~~~L----~~il~~~~~~~~~~~vfLGD~VDRG~~s~e--v-l~ll~~lk~~~p~~v~~LrGNHE 125 (324)
+++++||+|-- ...+ ..+++...-...+-+|++||+++.|....+ . ...+..|. ..+-.++.++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCCCc
Confidence 58899999952 2223 333443332334667889999999984332 2 22222222 12334899999999
Q ss_pred cchhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEEEEcCcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhh
Q psy16875 126 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLW 205 (324)
Q Consensus 126 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllW 205 (324)
... ...+.. ..+.++-+.+.++..|- ..-++++|-=+.+... |
T Consensus 81 ~~~-~ld~~~--------~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~------------------------~ 123 (214)
T cd07399 81 LVL-ALEFGP--------RDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDS------------------------R 123 (214)
T ss_pred chh-hCCCCC--------CHHHHHHHHHHHHHCCC----CCEEEEecccccCCCC------------------------c
Confidence 432 211111 12222333344443221 1236778864322110 0
Q ss_pred cCCCCCCCCcccCCCCCceecCHHHHHHHHHhC-CCcEEEEeecccccCceEE-----cCceEEEEecCCCCCCCCCCc-
Q psy16875 206 SDPDKDVQGWGENDRGVSFTFGADVVSKFLHNH-DLDLICRAHQVVDDGYEFF-----AKRQLVTLFSAPNYCGEFDNA- 278 (324)
Q Consensus 206 sDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~-~~~~iIRgH~~~~~G~~~~-----~~~~~itifSa~~y~~~~~n~- 278 (324)
.+. ...| ....-+.+.+.+.++++ ++++++-||.-.. +.... .++.+..+.+........+|.
T Consensus 124 ~~~---~~~~------~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~ 193 (214)
T cd07399 124 PDS---IDYD------SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNGF 193 (214)
T ss_pred Ccc---cccc------cccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcce
Confidence 000 0001 01123556788889988 7999999997753 33333 234455554432111111121
Q ss_pred EEEEEEcCC-cceEEEEEcc
Q psy16875 279 GGMMSVDET-LMCSFQILKP 297 (324)
Q Consensus 279 ga~l~i~~~-~~~~~~~~~~ 297 (324)
=.++.++.+ ..+.+..+.|
T Consensus 194 ~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 194 LRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEEecCCCEEEEEeCCC
Confidence 135566665 4666666654
No 50
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.33 E-value=2.5e-05 Score=68.41 Aligned_cols=159 Identities=18% Similarity=0.152 Sum_probs=96.0
Q ss_pred CCEEEEeccCCCHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccc
Q psy16875 56 APLKICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 135 (324)
Q Consensus 56 ~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf 135 (324)
.+|.|+||.||...+-.+..+.......+.+|.+||++...... .+.. ....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~-----~l~~---~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD-----ALEG---GLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH-----Hhhc---ccccceEEEEccCCCcccc-----
Confidence 46899999999997666666665556667788899998754421 1111 0235799999999985432
Q ss_pred hHHHHHHhcHHHHHHHHHhhhcCCeEE--EEc-CcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCC
Q psy16875 136 YDECKRRYNIKLWKTFTDCFNCLPIAA--IID-EKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDV 212 (324)
Q Consensus 136 ~~e~~~~~~~~~~~~~~~~f~~LPla~--~i~-~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~ 212 (324)
..+|-.. .++ -+++++||....
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~----------------------------------- 93 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYF----------------------------------- 93 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCccc-----------------------------------
Confidence 2233332 334 479999996421
Q ss_pred CCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEEcCC-cceE
Q psy16875 213 QGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDET-LMCS 291 (324)
Q Consensus 213 ~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~-~~~~ 291 (324)
.......++.+.+..+++.+|.||+-.+ .++...+-.++-=-|.+.+-+. +..+++.++.+ .++.
T Consensus 94 -----------~~~~~~~l~~la~~~~~Dvli~GHTH~p-~~~~~~~i~~vNPGS~s~pr~~--~~~sy~il~~~~~~~~ 159 (172)
T COG0622 94 -----------VKTDLSLLEYLAKELGADVLIFGHTHKP-VAEKVGGILLVNPGSVSGPRGG--NPASYAILDVDNLEVE 159 (172)
T ss_pred -----------cccCHHHHHHHHHhcCCCEEEECCCCcc-cEEEECCEEEEcCCCcCCCCCC--CCcEEEEEEcCCCEEE
Confidence 0123456777888889999999999985 3333222112222344444332 44344544333 5555
Q ss_pred EEEEc
Q psy16875 292 FQILK 296 (324)
Q Consensus 292 ~~~~~ 296 (324)
...+.
T Consensus 160 ~~~~~ 164 (172)
T COG0622 160 VLFLE 164 (172)
T ss_pred EEEee
Confidence 55443
No 51
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.18 E-value=3e-06 Score=76.06 Aligned_cols=71 Identities=27% Similarity=0.235 Sum_probs=51.4
Q ss_pred CCEEEEeccCCCHH----HHHHHHHhCCCCCCceEEEeCcccCCCCCcH-HHHHHHHHhhhhCCCcEEEECCCcccch
Q psy16875 56 APLKICGDIHGQYT----DLLRLFEYGGFPPDANYLFLGDYVDRGKQSL-ETICLLLAYKIKYPENFFLLRGNHECAS 128 (324)
Q Consensus 56 ~~i~vvGDIHG~~~----~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~-evl~ll~~lk~~~p~~v~~LrGNHE~~~ 128 (324)
.++++++|+|+... .+.++++.+.....+.+++.||++|.+.... ++..++..+. .+..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 47899999998743 6677776655444567788999999987765 4555554443 3345999999999854
No 52
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.16 E-value=0.00019 Score=67.05 Aligned_cols=70 Identities=14% Similarity=0.049 Sum_probs=46.6
Q ss_pred CCEEEEeccC-C-----------CHHHHHHHHHhCCC-C-CCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEEC
Q psy16875 56 APLKICGDIH-G-----------QYTDLLRLFEYGGF-P-PDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 121 (324)
Q Consensus 56 ~~i~vvGDIH-G-----------~~~~L~~il~~~~~-~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~Lr 121 (324)
-+++.|+|+| . ....|.++++.+.- . ..+-+|+.||+++.|. .+-+..+.+.-.+.+..++++.
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v~ 92 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWLP 92 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEeC
Confidence 4699999999 1 24567777776532 2 3456778999999874 3333333333233455699999
Q ss_pred CCcccc
Q psy16875 122 GNHECA 127 (324)
Q Consensus 122 GNHE~~ 127 (324)
||||..
T Consensus 93 GNHD~~ 98 (275)
T PRK11148 93 GNHDFQ 98 (275)
T ss_pred CCCCCh
Confidence 999973
No 53
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.16 E-value=0.00011 Score=67.99 Aligned_cols=71 Identities=11% Similarity=-0.038 Sum_probs=43.5
Q ss_pred CEEEEeccCCCH----------------HHHHHHHHhCCCC--CCceEEEeCcccCCCCCcH---HHHHHHHH-hhhh-C
Q psy16875 57 PLKICGDIHGQY----------------TDLLRLFEYGGFP--PDANYLFLGDYVDRGKQSL---ETICLLLA-YKIK-Y 113 (324)
Q Consensus 57 ~i~vvGDIHG~~----------------~~L~~il~~~~~~--~~~~~vfLGD~VDRG~~s~---evl~ll~~-lk~~-~ 113 (324)
+++++||+|-.. ..|+++++.+... ..+-++++||+++.|.... +....+.+ ++.. .
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 578899998763 2355666655322 3456778999999887542 11222222 2211 2
Q ss_pred CCcEEEECCCcccc
Q psy16875 114 PENFFLLRGNHECA 127 (324)
Q Consensus 114 p~~v~~LrGNHE~~ 127 (324)
+-.++.++||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 34599999999984
No 54
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.14 E-value=5e-06 Score=77.76 Aligned_cols=70 Identities=19% Similarity=0.062 Sum_probs=50.3
Q ss_pred CCEEEEeccCCC----HHHHHHHHHhCCCCCCceEEEeCcccCCC--CCcHHHHHHHHHhhhhCCCcEEEECCCcccc
Q psy16875 56 APLKICGDIHGQ----YTDLLRLFEYGGFPPDANYLFLGDYVDRG--KQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 56 ~~i~vvGDIHG~----~~~L~~il~~~~~~~~~~~vfLGD~VDRG--~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 127 (324)
-+|++++|+|.. ...+.++++...-...+-++++||++|.+ ....++...+..|+... .++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCCCCcc
Confidence 469999999976 55677777765444556788899999954 23344556666666444 499999999974
No 55
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.13 E-value=0.00011 Score=65.30 Aligned_cols=70 Identities=11% Similarity=0.031 Sum_probs=43.5
Q ss_pred CCEEEEeccCCCHH------------HHHHHHHhCCCCCCceEEEeCcccCCCCCc---HHHHHHHHHhhhhCCCcEEEE
Q psy16875 56 APLKICGDIHGQYT------------DLLRLFEYGGFPPDANYLFLGDYVDRGKQS---LETICLLLAYKIKYPENFFLL 120 (324)
Q Consensus 56 ~~i~vvGDIHG~~~------------~L~~il~~~~~~~~~~~vfLGD~VDRG~~s---~evl~ll~~lk~~~p~~v~~L 120 (324)
-++.+++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..++.......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 36899999996222 112222222223446788999999977653 455555544333334558999
Q ss_pred CCCcc
Q psy16875 121 RGNHE 125 (324)
Q Consensus 121 rGNHE 125 (324)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 56
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.12 E-value=2.7e-05 Score=79.05 Aligned_cols=112 Identities=16% Similarity=0.229 Sum_probs=60.6
Q ss_pred cCCEEEEeccC-CCH----HHHHHHHHhCC-C--------CCCceEEEeCcccCC-CCCc---------------HHHHH
Q psy16875 55 EAPLKICGDIH-GQY----TDLLRLFEYGG-F--------PPDANYLFLGDYVDR-GKQS---------------LETIC 104 (324)
Q Consensus 55 ~~~i~vvGDIH-G~~----~~L~~il~~~~-~--------~~~~~~vfLGD~VDR-G~~s---------------~evl~ 104 (324)
+..+++++|+| |.- ..+..+++.+. . ...+.+|++||++|. |..+ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 35689999999 642 23444444332 1 123568889999994 3221 13344
Q ss_pred HHHHhhhhCCCcEEEECCCcccchhhhhc-cchHHHHHHhcHHHHHH-HHHhhhcCCeEEEEcC-cEEEecCC
Q psy16875 105 LLLAYKIKYPENFFLLRGNHECASINRIY-GFYDECKRRYNIKLWKT-FTDCFNCLPIAAIIDE-KIFCCHGG 174 (324)
Q Consensus 105 ll~~lk~~~p~~v~~LrGNHE~~~~~~~~-gf~~e~~~~~~~~~~~~-~~~~f~~LPla~~i~~-~il~vHgG 174 (324)
+|..+. ..-.+++++||||........ .+..... ..+.. -..++.. |....+++ +++++||-
T Consensus 323 ~L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~-----~~l~~~~v~~lsN-P~~i~l~G~~iLl~HG~ 387 (504)
T PRK04036 323 YLKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIR-----SLFPEHNVTFVSN-PALVNLHGVDVLIYHGR 387 (504)
T ss_pred HHHhhh--cCCeEEEecCCCcchhhccCCCCccHHHH-----HhcCcCCeEEecC-CeEEEECCEEEEEECCC
Confidence 444443 223599999999985432111 1111111 11111 1234444 76666655 68999996
No 57
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=98.12 E-value=4.3e-05 Score=77.77 Aligned_cols=71 Identities=24% Similarity=0.305 Sum_probs=49.6
Q ss_pred CHHHHHHHHHhCCCc----EEEEeecccc--cCceE-EcCceEEEE---ecCCCCCCCCCCcEEEEEEcCCcceEEEEEc
Q psy16875 227 GADVVSKFLHNHDLD----LICRAHQVVD--DGYEF-FAKRQLVTL---FSAPNYCGEFDNAGGMMSVDETLMCSFQILK 296 (324)
Q Consensus 227 g~~~~~~fl~~~~~~----~iIRgH~~~~--~G~~~-~~~~~~iti---fSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 296 (324)
.++..+..|+..|++ .||-||.||. .|=.. -++||++.| ||. .|....+=+|--| |.++-........
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfsk-AYqk~TGIAGYTL-iyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSK-AYQKTTGIAGYTL-IYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhh-hhccccCccceEE-EecCCcceeccCC
Confidence 567788999999998 9999999986 66653 579999999 544 4665544455444 5555555555555
Q ss_pred cCc
Q psy16875 297 PSE 299 (324)
Q Consensus 297 ~~~ 299 (324)
|-.
T Consensus 585 pF~ 587 (640)
T PF06874_consen 585 PFE 587 (640)
T ss_pred CCC
Confidence 543
No 58
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.97 E-value=1.6e-05 Score=72.78 Aligned_cols=68 Identities=21% Similarity=0.147 Sum_probs=48.2
Q ss_pred CEEEEeccCCCH------HHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccc
Q psy16875 57 PLKICGDIHGQY------TDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 57 ~i~vvGDIHG~~------~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 127 (324)
+|.+++|+|+++ ..|.++++.+.-...+-+|+.||++++.+.+.+.+..+.++ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 588999999753 23556666554445667888999999876666665555442 334599999999975
No 59
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.89 E-value=0.0001 Score=65.70 Aligned_cols=26 Identities=12% Similarity=0.138 Sum_probs=21.4
Q ss_pred CHHHHHHHHHhCCCcEEEEeeccccc
Q psy16875 227 GADVVSKFLHNHDLDLICRAHQVVDD 252 (324)
Q Consensus 227 g~~~~~~fl~~~~~~~iIRgH~~~~~ 252 (324)
.++.+.+.++..+++.+|.||.-.+.
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~ 202 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPA 202 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 45567788889999999999998753
No 60
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.88 E-value=3.7e-05 Score=71.60 Aligned_cols=73 Identities=21% Similarity=0.166 Sum_probs=49.4
Q ss_pred CEEEEeccC-C------------CHHHHHHHHHhCCCCCCceEEEeCcccCCCCC-cHHHHHHHHHhhhhCCCcEEEECC
Q psy16875 57 PLKICGDIH-G------------QYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQ-SLETICLLLAYKIKYPENFFLLRG 122 (324)
Q Consensus 57 ~i~vvGDIH-G------------~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~-s~evl~ll~~lk~~~p~~v~~LrG 122 (324)
++++++|+| + ....|.++++.+.....+-+|++||+++.|.. +.+-+..+.+.-...+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 689999999 2 24566777776644445678889999998863 233444444433333456999999
Q ss_pred Ccccchh
Q psy16875 123 NHECASI 129 (324)
Q Consensus 123 NHE~~~~ 129 (324)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 61
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.86 E-value=0.0025 Score=57.71 Aligned_cols=204 Identities=16% Similarity=0.190 Sum_probs=118.7
Q ss_pred CCEEEEeccCCCHHHHHHHHHhCCCCCCceEEEeCccc--CCCCCcHHHHHH-HHHhhhhCCCcEEEECCCcccchhhhh
Q psy16875 56 APLKICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYV--DRGKQSLETICL-LLAYKIKYPENFFLLRGNHECASINRI 132 (324)
Q Consensus 56 ~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~V--DRG~~s~evl~l-l~~lk~~~p~~v~~LrGNHE~~~~~~~ 132 (324)
.++..+.|+||.++.+.++++.+.....+-+++.||+. +.|+.-...-.. +..++ .....++.++||.|...+-..
T Consensus 4 mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~~ 82 (226)
T COG2129 4 MKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVIDV 82 (226)
T ss_pred ceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHHHH
Confidence 57899999999999999999988766667788899999 887743322221 33333 233579999999988654321
Q ss_pred ccchHHHHHHhcHHHHHHHHHhhhcCCeEEEEcCcEEEecCCCCCCcc------cHHHHHhhcCCC-CCCCchhHHHHhh
Q psy16875 133 YGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQ------MMEQIRRIMRPT-DVPDTGLLCDLLW 205 (324)
Q Consensus 133 ~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~------~~~~i~~i~r~~-~~~~~~~~~dllW 205 (324)
....+.. -.+-...+++-.+|-=||..|..- +.++|....+.. ....+. ..=++.
T Consensus 83 -------l~~~~~~----------v~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~-~~Il~~ 144 (226)
T COG2129 83 -------LKNAGVN----------VHGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNP-VNILLT 144 (226)
T ss_pred -------HHhcccc----------cccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCc-ceEEEe
Confidence 0101111 111334445544555577765432 345554432211 000000 000111
Q ss_pred cCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEEc
Q psy16875 206 SDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVD 285 (324)
Q Consensus 206 sDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~ 285 (324)
.-|.-...- .++-| -..-|..+++++.++.+-.+.|.||=--..|+..-.+ ||+-.|.-.+ .-.-|++.++
T Consensus 145 HaPP~gt~~--d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~l~ 215 (226)
T COG2129 145 HAPPYGTLL--DTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIELE 215 (226)
T ss_pred cCCCCCccc--cCCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEEec
Confidence 122111100 01222 1456899999999999999999999877788876433 5565665433 3567888887
Q ss_pred CC
Q psy16875 286 ET 287 (324)
Q Consensus 286 ~~ 287 (324)
+.
T Consensus 216 ~~ 217 (226)
T COG2129 216 KE 217 (226)
T ss_pred Cc
Confidence 77
No 62
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.79 E-value=7.2e-05 Score=64.85 Aligned_cols=67 Identities=25% Similarity=0.336 Sum_probs=43.2
Q ss_pred EEEEeccCCCHHHH---------------HHHHHhCC--CCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEE
Q psy16875 58 LKICGDIHGQYTDL---------------LRLFEYGG--FPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 120 (324)
Q Consensus 58 i~vvGDIHG~~~~L---------------~~il~~~~--~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~L 120 (324)
+++|+|+|=....- ..+++... ..+.+.++++||++++|..+.. +.++.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 36888998654432 22333221 2345778999999999986644 4444333 3569999
Q ss_pred CCCcccchh
Q psy16875 121 RGNHECASI 129 (324)
Q Consensus 121 rGNHE~~~~ 129 (324)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997643
No 63
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.74 E-value=0.00085 Score=61.92 Aligned_cols=72 Identities=19% Similarity=0.200 Sum_probs=51.5
Q ss_pred CEEEEeccCCC------HHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhh--hCCCcEEEECCCcccch
Q psy16875 57 PLKICGDIHGQ------YTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKI--KYPENFFLLRGNHECAS 128 (324)
Q Consensus 57 ~i~vvGDIHG~------~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~--~~p~~v~~LrGNHE~~~ 128 (324)
+++.|+|+|-. ...+..+++.+.....+-+|+.||+.+.|. .+-...+..+-. ..|..+++++||||.+.
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~ 79 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDARV 79 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCCc
Confidence 68899999977 345556667776555678889999999953 333333333333 56778999999999977
Q ss_pred hh
Q psy16875 129 IN 130 (324)
Q Consensus 129 ~~ 130 (324)
.+
T Consensus 80 ~~ 81 (301)
T COG1409 80 VN 81 (301)
T ss_pred hH
Confidence 55
No 64
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.74 E-value=0.0005 Score=62.69 Aligned_cols=197 Identities=15% Similarity=0.219 Sum_probs=105.1
Q ss_pred EEeccCCC------HHHHHHHHHhCCCCCCceEEEeCcccCC--CCC-----cHHHHHHHHHhhhhCCCcEEEECCCccc
Q psy16875 60 ICGDIHGQ------YTDLLRLFEYGGFPPDANYLFLGDYVDR--GKQ-----SLETICLLLAYKIKYPENFFLLRGNHEC 126 (324)
Q Consensus 60 vvGDIHG~------~~~L~~il~~~~~~~~~~~vfLGD~VDR--G~~-----s~evl~ll~~lk~~~p~~v~~LrGNHE~ 126 (324)
.|+|+|=. .+.|.+.|+... +..+.+.+|||++|- |.+ -.+|...|..+. +.+.+++.+.||||.
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i~GN~Df 79 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYIHGNHDF 79 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEecCchHH
Confidence 68999954 344556666543 245678889999972 332 234444444433 466789999999995
Q ss_pred chhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEEEE---cCcEEEecCCCCCCcc-cHHHHHh-----------hcCC
Q psy16875 127 ASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAII---DEKIFCCHGGLSPDLQ-MMEQIRR-----------IMRP 191 (324)
Q Consensus 127 ~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i---~~~il~vHgGi~p~~~-~~~~i~~-----------i~r~ 191 (324)
..-+ .++ .-..-+.-+|-...+ |.+++++||-.--... .....+. +..|
T Consensus 80 ll~~-~f~---------------~~~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl~ 143 (237)
T COG2908 80 LLGK-RFA---------------QEAGGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNLP 143 (237)
T ss_pred HHHH-HHH---------------hhcCceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHhH
Confidence 4322 110 001113334444443 5689999996532111 0111111 1111
Q ss_pred CCCCCchhHHHHhhcCCCCCCCCcccCCCCCc---eecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecC
Q psy16875 192 TDVPDTGLLCDLLWSDPDKDVQGWGENDRGVS---FTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSA 268 (324)
Q Consensus 192 ~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~---~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa 268 (324)
.. -..-+..-+|+.- .|........ ....++++.+-+++++++.+|.||.-.+..-....-.+ |-
T Consensus 144 l~--~R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~y-i~---- 211 (237)
T COG2908 144 LR--VRRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITY-IN---- 211 (237)
T ss_pred HH--HHHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceE-Ee----
Confidence 11 0012233455554 1111111111 23467788899999999999999999876555432111 11
Q ss_pred CCCCCCCCCcEEEEEEcCCcc
Q psy16875 269 PNYCGEFDNAGGMMSVDETLM 289 (324)
Q Consensus 269 ~~y~~~~~n~ga~l~i~~~~~ 289 (324)
+|.-...|++++++.+..
T Consensus 212 ---lGdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 212 ---LGDWVSEGSILEVDDGGL 229 (237)
T ss_pred ---cCcchhcceEEEEecCcE
Confidence 122235678888877754
No 65
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.70 E-value=0.00013 Score=66.21 Aligned_cols=69 Identities=25% Similarity=0.243 Sum_probs=45.2
Q ss_pred CEEEEeccCCC------------HHHHHHHHHhCCCC--CCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECC
Q psy16875 57 PLKICGDIHGQ------------YTDLLRLFEYGGFP--PDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 122 (324)
Q Consensus 57 ~i~vvGDIHG~------------~~~L~~il~~~~~~--~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrG 122 (324)
|+++++|+|=. ...|.++++.+... ..+-+|++||+++.|.. +....+.+...+.+-.++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSP--ESYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCH--HHHHHHHHHHhhcCCCEEEeCC
Confidence 58899999944 34567777765433 45668889999998753 2222222222223456999999
Q ss_pred Ccccc
Q psy16875 123 NHECA 127 (324)
Q Consensus 123 NHE~~ 127 (324)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 66
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.69 E-value=0.0001 Score=68.32 Aligned_cols=71 Identities=21% Similarity=0.245 Sum_probs=47.3
Q ss_pred CEEEEeccCC-C-----------HHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHH----HHHHHhhhhCCCcEEEE
Q psy16875 57 PLKICGDIHG-Q-----------YTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETI----CLLLAYKIKYPENFFLL 120 (324)
Q Consensus 57 ~i~vvGDIHG-~-----------~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl----~ll~~lk~~~p~~v~~L 120 (324)
+++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+.. .++..|+...|-.++++
T Consensus 2 kilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~i 81 (253)
T TIGR00619 2 RILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVVI 81 (253)
T ss_pred EEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 6889999993 2 234555555443344567889999999986665443 33444443333469999
Q ss_pred CCCcccc
Q psy16875 121 RGNHECA 127 (324)
Q Consensus 121 rGNHE~~ 127 (324)
.||||..
T Consensus 82 ~GNHD~~ 88 (253)
T TIGR00619 82 SGNHDSA 88 (253)
T ss_pred ccCCCCh
Confidence 9999985
No 67
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.65 E-value=0.00017 Score=62.76 Aligned_cols=58 Identities=19% Similarity=0.123 Sum_probs=33.8
Q ss_pred HHHHHHhCCCCCCceEEEeCcccCCCCCcH-HHHHHH-HHhhhhCCCcEEEECCCcccch
Q psy16875 71 LLRLFEYGGFPPDANYLFLGDYVDRGKQSL-ETICLL-LAYKIKYPENFFLLRGNHECAS 128 (324)
Q Consensus 71 L~~il~~~~~~~~~~~vfLGD~VDRG~~s~-evl~ll-~~lk~~~p~~v~~LrGNHE~~~ 128 (324)
+.++.+.+.....+.+|++||++|...... +....+ .......+-.+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 334444443344578999999998654332 222211 1112234457999999999854
No 68
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.63 E-value=0.00061 Score=58.54 Aligned_cols=47 Identities=26% Similarity=0.282 Sum_probs=29.4
Q ss_pred CCceEEEeCcccCCCCCcH-HHH-HHHHHhhhh---C-CCcEEEECCCcccch
Q psy16875 82 PDANYLFLGDYVDRGKQSL-ETI-CLLLAYKIK---Y-PENFFLLRGNHECAS 128 (324)
Q Consensus 82 ~~~~~vfLGD~VDRG~~s~-evl-~ll~~lk~~---~-p~~v~~LrGNHE~~~ 128 (324)
..+.+|++||++|.+.... +.. ..+..++.. . +-.++++.||||...
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 4567889999999876432 222 222222222 1 246999999999843
No 69
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.60 E-value=0.00015 Score=70.13 Aligned_cols=72 Identities=22% Similarity=0.283 Sum_probs=47.7
Q ss_pred CEEEEeccC-C-----------CHHHHHHHHHhCCCCCCceEEEeCcccCCC-CCcHHHHHHHHH----hhhhCCCcEEE
Q psy16875 57 PLKICGDIH-G-----------QYTDLLRLFEYGGFPPDANYLFLGDYVDRG-KQSLETICLLLA----YKIKYPENFFL 119 (324)
Q Consensus 57 ~i~vvGDIH-G-----------~~~~L~~il~~~~~~~~~~~vfLGD~VDRG-~~s~evl~ll~~----lk~~~p~~v~~ 119 (324)
+++.+||+| | ....|.++++.+.-...+.+|+.||++|+. +.+.+++.++.. .....+-.+++
T Consensus 2 KilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~ 81 (340)
T PHA02546 2 KILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLHV 81 (340)
T ss_pred eEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 688999999 4 234455565555444557788899999985 455555544433 11123456999
Q ss_pred ECCCcccch
Q psy16875 120 LRGNHECAS 128 (324)
Q Consensus 120 LrGNHE~~~ 128 (324)
|.||||...
T Consensus 82 I~GNHD~~~ 90 (340)
T PHA02546 82 LVGNHDMYY 90 (340)
T ss_pred EccCCCccc
Confidence 999999843
No 70
>KOG0376|consensus
Probab=97.59 E-value=6.4e-06 Score=81.23 Aligned_cols=241 Identities=12% Similarity=0.003 Sum_probs=161.3
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecC----CEEEEeccCCCHHHHHHHHHhCCCCC-CceEEEeCcccCCCCCcHHH
Q psy16875 28 QMSEAEVRGLCLKSREIFLQQPILLELEA----PLKICGDIHGQYTDLLRLFEYGGFPP-DANYLFLGDYVDRGKQSLET 102 (324)
Q Consensus 28 ~~~~~~i~~l~~~a~~i~~~ep~ll~~~~----~i~vvGDIHG~~~~L~~il~~~~~~~-~~~~vfLGD~VDRG~~s~ev 102 (324)
.|...++..+++.+.+++..+|+...... -.+.++|.||.+.|+..+++.- |. ..-|++-|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 46678888999999999999998877632 3789999999999998888754 32 24589999999999999999
Q ss_pred HHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhcH---HHHHHHHHhhhcCCeEEEEcCcEEEecCCCCC--
Q psy16875 103 ICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI---KLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSP-- 177 (324)
Q Consensus 103 l~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p-- 177 (324)
+..+...+...|+...+.|++||...+-..++|..+....++. .++..+... ..-|++....+.++=-| -+.-
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~-~~~~i~~~y~g~~le~~-kvt~e~ 169 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEE-DMDLIESDYSGPVLEDH-KVTLEF 169 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCccccccccccc-cccccccccCCcccccc-hhhHHH
Confidence 9999999999999999999999999998888888776655532 122211111 11114444443322111 1100
Q ss_pred ------------C------cccHHHHHhhcCCCCCC-CchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhC
Q psy16875 178 ------------D------LQMMEQIRRIMRPTDVP-DTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNH 238 (324)
Q Consensus 178 ------------~------~~~~~~i~~i~r~~~~~-~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~ 238 (324)
. ...+++...+.+..... .-....+..|+++......+.+..++.+...++.....||...
T Consensus 170 vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfng 249 (476)
T KOG0376|consen 170 VKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNG 249 (476)
T ss_pred HHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccC
Confidence 0 00111111111111110 1114457788888866555666677777778888889999999
Q ss_pred CCcEEEEeeccc------------ccCceEEcC---ceEEEEecCCCCC
Q psy16875 239 DLDLICRAHQVV------------DDGYEFFAK---RQLVTLFSAPNYC 272 (324)
Q Consensus 239 ~~~~iIRgH~~~------------~~G~~~~~~---~~~itifSa~~y~ 272 (324)
++.-+++.|.-+ ..+|...++ +.++++|+.+.++
T Consensus 250 dfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~ 298 (476)
T KOG0376|consen 250 DFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEV 298 (476)
T ss_pred ceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcch
Confidence 998888887753 233333222 3488999998876
No 71
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.58 E-value=0.00015 Score=64.69 Aligned_cols=73 Identities=23% Similarity=0.302 Sum_probs=48.8
Q ss_pred CEEEEeccC-CC--------------HHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhC---CCcEE
Q psy16875 57 PLKICGDIH-GQ--------------YTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKY---PENFF 118 (324)
Q Consensus 57 ~i~vvGDIH-G~--------------~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~---p~~v~ 118 (324)
+|+.++|+| |. +..|.++++.+.....+.+|+.||++|....+.+.+..+.....+. .-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578999999 32 1236666665544455678889999998876655444443332222 34699
Q ss_pred EECCCcccchh
Q psy16875 119 LLRGNHECASI 129 (324)
Q Consensus 119 ~LrGNHE~~~~ 129 (324)
++.||||....
T Consensus 81 ~~~GNHD~~~~ 91 (223)
T cd00840 81 IIAGNHDSPSR 91 (223)
T ss_pred EecCCCCCccc
Confidence 99999998654
No 72
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.54 E-value=0.0002 Score=66.79 Aligned_cols=70 Identities=20% Similarity=0.283 Sum_probs=44.6
Q ss_pred EEEEeccCCCHHHHHHHHHhC---CCCCCceEEEeCcccCCCCCc-HHHH----------HHHHHh--hhhCCCcEEEEC
Q psy16875 58 LKICGDIHGQYTDLLRLFEYG---GFPPDANYLFLGDYVDRGKQS-LETI----------CLLLAY--KIKYPENFFLLR 121 (324)
Q Consensus 58 i~vvGDIHG~~~~L~~il~~~---~~~~~~~~vfLGD~VDRG~~s-~evl----------~ll~~l--k~~~p~~v~~Lr 121 (324)
|+|+||+||+++.+...++.. ...+.+-+|++||+-..+..+ .+.+ ++..-+ ....|--+++|-
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 689999999999987654432 234556788899997554433 2222 111111 223565689999
Q ss_pred CCcccc
Q psy16875 122 GNHECA 127 (324)
Q Consensus 122 GNHE~~ 127 (324)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 73
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.49 E-value=0.00033 Score=63.88 Aligned_cols=69 Identities=19% Similarity=0.188 Sum_probs=43.5
Q ss_pred CCEEEEeccC-CCHHHH----------------HHHHHhCCCCCCceEEEeCcccCCCCCc---HHHHHHHHHhhhhCCC
Q psy16875 56 APLKICGDIH-GQYTDL----------------LRLFEYGGFPPDANYLFLGDYVDRGKQS---LETICLLLAYKIKYPE 115 (324)
Q Consensus 56 ~~i~vvGDIH-G~~~~L----------------~~il~~~~~~~~~~~vfLGD~VDRG~~s---~evl~ll~~lk~~~p~ 115 (324)
.++.||+|+| |.-..+ .++.+.......+.+|++||+.+....+ .++.+++..+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 6789999999 543322 2233333333457899999999765543 2223333332 24
Q ss_pred cEEEECCCcccch
Q psy16875 116 NFFLLRGNHECAS 128 (324)
Q Consensus 116 ~v~~LrGNHE~~~ 128 (324)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999754
No 74
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.18 E-value=0.0011 Score=65.57 Aligned_cols=73 Identities=18% Similarity=0.193 Sum_probs=55.3
Q ss_pred CCEEEEeccCCC------------HHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhh-----------
Q psy16875 56 APLKICGDIHGQ------------YTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIK----------- 112 (324)
Q Consensus 56 ~~i~vvGDIHG~------------~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~----------- 112 (324)
.+|++++|+|-. +..|.++++.+.....+-+|+.||++|++.-|.+++..++.+-.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~ 83 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELE 83 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchh
Confidence 479999999943 557788888776556677888999999999998887665544322
Q ss_pred -------------------------CCCcEEEECCCcccch
Q psy16875 113 -------------------------YPENFFLLRGNHECAS 128 (324)
Q Consensus 113 -------------------------~p~~v~~LrGNHE~~~ 128 (324)
..-.|++|-||||...
T Consensus 84 ~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 84 FLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1236999999999964
No 75
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.13 E-value=0.001 Score=60.67 Aligned_cols=45 Identities=9% Similarity=-0.079 Sum_probs=30.5
Q ss_pred cCHHHHHHHHHhCCCcEEEEeecccccCce---EEcCceEEEEecCCCCC
Q psy16875 226 FGADVVSKFLHNHDLDLICRAHQVVDDGYE---FFAKRQLVTLFSAPNYC 272 (324)
Q Consensus 226 fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~---~~~~~~~itifSa~~y~ 272 (324)
++.+.+.+.+++.++++++-||.-...-.. ...+| |+.+++|+=|
T Consensus 180 ~~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~g--i~~~~~~~~~ 227 (232)
T cd07393 180 GDDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGG--IRYQLVSADY 227 (232)
T ss_pred CCHHHHHHHHHHcCCCEEEECCCCCCcccccccceECC--EEEEEEcchh
Confidence 355677888999999999999998643322 12344 5666666543
No 76
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.05 E-value=0.0015 Score=60.56 Aligned_cols=71 Identities=21% Similarity=0.173 Sum_probs=41.7
Q ss_pred EEEEeccCCCHH------HH-HHHHHhCCCCCCceEEEeCcccCCCCCc-------H----HHHHHHHHhhhhCCCcEEE
Q psy16875 58 LKICGDIHGQYT------DL-LRLFEYGGFPPDANYLFLGDYVDRGKQS-------L----ETICLLLAYKIKYPENFFL 119 (324)
Q Consensus 58 i~vvGDIHG~~~------~L-~~il~~~~~~~~~~~vfLGD~VDRG~~s-------~----evl~ll~~lk~~~p~~v~~ 119 (324)
++.++|+|-... .. ..+++.+.....+-+|++||++|++... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 567999996321 12 2334444333456788899999987531 1 1222222222223567999
Q ss_pred ECCCcccch
Q psy16875 120 LRGNHECAS 128 (324)
Q Consensus 120 LrGNHE~~~ 128 (324)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999953
No 77
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.03 E-value=0.0016 Score=61.00 Aligned_cols=70 Identities=17% Similarity=0.166 Sum_probs=41.7
Q ss_pred CCEEEEeccCC----CHHHHHHHHHhCCCCCCceEEEeCcccCCCCCc-----HHHHHHHHHhhhhCCCcEEEECCCccc
Q psy16875 56 APLKICGDIHG----QYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHEC 126 (324)
Q Consensus 56 ~~i~vvGDIHG----~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~~LrGNHE~ 126 (324)
-+++|+||.|. ....+.++.+. ....+-+|++||+++-+... -..+..+..+....| ++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCccccc
Confidence 47899999995 33333444333 23345577899999644332 122233333333344 8999999998
Q ss_pred chh
Q psy16875 127 ASI 129 (324)
Q Consensus 127 ~~~ 129 (324)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 653
No 78
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=96.91 E-value=0.0019 Score=64.07 Aligned_cols=71 Identities=20% Similarity=0.191 Sum_probs=45.0
Q ss_pred CEEEEeccCC-C-------HHH----HHHHHHhCCCCCCceEEEeCcccCCCCCcHHHH----HHHHHhhhhCCCcEEEE
Q psy16875 57 PLKICGDIHG-Q-------YTD----LLRLFEYGGFPPDANYLFLGDYVDRGKQSLETI----CLLLAYKIKYPENFFLL 120 (324)
Q Consensus 57 ~i~vvGDIHG-~-------~~~----L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl----~ll~~lk~~~p~~v~~L 120 (324)
+++.++|+|- . ..+ |..+++.+.....+.+|+.||++|++..+.+.. .++..|+. .+-.++++
T Consensus 2 kilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~I 80 (407)
T PRK10966 2 RILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVVL 80 (407)
T ss_pred EEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEEE
Confidence 6889999993 2 111 233444443445677888999999986554432 23334432 23459999
Q ss_pred CCCcccch
Q psy16875 121 RGNHECAS 128 (324)
Q Consensus 121 rGNHE~~~ 128 (324)
.||||...
T Consensus 81 ~GNHD~~~ 88 (407)
T PRK10966 81 AGNHDSVA 88 (407)
T ss_pred cCCCCChh
Confidence 99999753
No 79
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.89 E-value=0.0017 Score=59.60 Aligned_cols=68 Identities=18% Similarity=0.229 Sum_probs=38.2
Q ss_pred EEEeccC--CCH---HHHHHHHHhC-CCC----CCceEEEeCcccCCCCC------------cH----HHHHHHHHhhhh
Q psy16875 59 KICGDIH--GQY---TDLLRLFEYG-GFP----PDANYLFLGDYVDRGKQ------------SL----ETICLLLAYKIK 112 (324)
Q Consensus 59 ~vvGDIH--G~~---~~L~~il~~~-~~~----~~~~~vfLGD~VDRG~~------------s~----evl~ll~~lk~~ 112 (324)
++|+|+| +.. ..+..+++.+ +.. ..+.+|++||++|+... .. ++..++..|.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 6899999 331 2223333332 221 23678889999997320 01 1223333332
Q ss_pred CCCcEEEECCCcccch
Q psy16875 113 YPENFFLLRGNHECAS 128 (324)
Q Consensus 113 ~p~~v~~LrGNHE~~~ 128 (324)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2346999999999853
No 80
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.60 E-value=0.0044 Score=58.50 Aligned_cols=72 Identities=22% Similarity=0.200 Sum_probs=47.6
Q ss_pred CCEEEEeccCCCHHH--HHHHHHhCCCCCCceEEEeCcccCC-CC-CcHHHHHHHHHhhhhCCCcEEEECCCcccchh
Q psy16875 56 APLKICGDIHGQYTD--LLRLFEYGGFPPDANYLFLGDYVDR-GK-QSLETICLLLAYKIKYPENFFLLRGNHECASI 129 (324)
Q Consensus 56 ~~i~vvGDIHG~~~~--L~~il~~~~~~~~~~~vfLGD~VDR-G~-~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~ 129 (324)
.+|+-++|+|-.... ..+.+........+-+++.|||+|+ .+ ....+...|..|+. |-.++.+.||||...-
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~--~~gv~av~GNHd~~~~ 120 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKA--PLGVFAVLGNHDYGVD 120 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhc--cCCEEEEecccccccc
Confidence 369999999987554 2233333332333667789999995 44 44455566666654 4459999999988653
No 81
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.50 E-value=0.0052 Score=53.56 Aligned_cols=48 Identities=23% Similarity=0.258 Sum_probs=30.6
Q ss_pred CCCceEEEeCcccCCCCCcH--H---HHHHHHHhhhhC-----CCcEEEECCCcccch
Q psy16875 81 PPDANYLFLGDYVDRGKQSL--E---TICLLLAYKIKY-----PENFFLLRGNHECAS 128 (324)
Q Consensus 81 ~~~~~~vfLGD~VDRG~~s~--e---vl~ll~~lk~~~-----p~~v~~LrGNHE~~~ 128 (324)
...+.+|++||++|.+.... + .+..+..+.... +-.++++.||||...
T Consensus 44 ~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 44 LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 34567889999999887542 2 232232321111 346999999999964
No 82
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.45 E-value=0.0072 Score=51.72 Aligned_cols=119 Identities=16% Similarity=0.235 Sum_probs=78.9
Q ss_pred EEEeccCCCHHHHHHHHHhCCC--CCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccch
Q psy16875 59 KICGDIHGQYTDLLRLFEYGGF--PPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 136 (324)
Q Consensus 59 ~vvGDIHG~~~~L~~il~~~~~--~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~ 136 (324)
.|+||+||+++.+..-++.... .+-+-+|++||+..-....-+.-.+ +.=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y-~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAY-KDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHH-hcCCccCCCCEEEECCCCC-----------
Confidence 4899999999999877766321 2345677899999766665343333 3334467778999999998
Q ss_pred HHHHHHhcHHHHHHHHHhhhcCCeEEEEcCcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcc
Q psy16875 137 DECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWG 216 (324)
Q Consensus 137 ~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~ 216 (324)
+-.||++|.=+. .....++. ..+.
T Consensus 69 ----------------------------~~DILlTh~wP~-gi~~~~~~-------------------~~~~-------- 92 (150)
T cd07380 69 ----------------------------GVDILLTSEWPK-GISKLSKV-------------------PFEE-------- 92 (150)
T ss_pred ----------------------------CCCEEECCCCch-hhhhhCCC-------------------cccc--------
Confidence 345899997421 11000000 0000
Q ss_pred cCCCCCceecCHHHHHHHHHhCCCcEEEEeeccc
Q psy16875 217 ENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVV 250 (324)
Q Consensus 217 ~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~ 250 (324)
.+..-|...+.+++++..=.+.+-||..+
T Consensus 93 -----~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 93 -----TLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred -----cccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 12345788999999999999999999754
No 83
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.38 E-value=0.0072 Score=53.95 Aligned_cols=46 Identities=20% Similarity=0.370 Sum_probs=32.7
Q ss_pred CCceEEEeCcccCCCCCcH--HHHHHHHHhhhhCC----CcEEEECCCcccc
Q psy16875 82 PDANYLFLGDYVDRGKQSL--ETICLLLAYKIKYP----ENFFLLRGNHECA 127 (324)
Q Consensus 82 ~~~~~vfLGD~VDRG~~s~--evl~ll~~lk~~~p----~~v~~LrGNHE~~ 127 (324)
..+-++||||++|.|+.+. +....+..++..++ -.++.|.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 4567889999999999643 35565555543322 3588999999974
No 84
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.34 E-value=0.0064 Score=55.67 Aligned_cols=66 Identities=26% Similarity=0.301 Sum_probs=43.2
Q ss_pred CEEEEeccCCCH---------HHHHHHHHhCCCC-CCceEEEeCcccCCCCCcH-----HHHHHHHHhhhhCCCcEEEEC
Q psy16875 57 PLKICGDIHGQY---------TDLLRLFEYGGFP-PDANYLFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLR 121 (324)
Q Consensus 57 ~i~vvGDIHG~~---------~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~-----evl~ll~~lk~~~p~~v~~Lr 121 (324)
+|+.++|+||.+ ..+.++++...-. ++.-++..||+++.++.+. .++..+..+. -. ++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~d-~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG----YD-AVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC----CC-EEee
Confidence 578999999876 5666777665433 3334566899999887643 4555554432 22 3455
Q ss_pred CCcccc
Q psy16875 122 GNHECA 127 (324)
Q Consensus 122 GNHE~~ 127 (324)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999974
No 85
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.31 E-value=0.19 Score=46.67 Aligned_cols=24 Identities=4% Similarity=0.018 Sum_probs=21.8
Q ss_pred cCHHHHHHHHHhCCCcEEEEeecc
Q psy16875 226 FGADVVSKFLHNHDLDLICRAHQV 249 (324)
Q Consensus 226 fg~~~~~~fl~~~~~~~iIRgH~~ 249 (324)
-+++..++.|++.+-.+|.-||+-
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC
Confidence 478899999999999999999886
No 86
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.28 E-value=0.014 Score=53.42 Aligned_cols=80 Identities=19% Similarity=0.198 Sum_probs=48.8
Q ss_pred eecCCEEEEeccCCCHHHHH----------------HHHH-hCCCCCCceEEEeCcccCCCCC-----cHHHHHHHHHhh
Q psy16875 53 ELEAPLKICGDIHGQYTDLL----------------RLFE-YGGFPPDANYLFLGDYVDRGKQ-----SLETICLLLAYK 110 (324)
Q Consensus 53 ~~~~~i~vvGDIHG~~~~L~----------------~il~-~~~~~~~~~~vfLGD~VDRG~~-----s~evl~ll~~lk 110 (324)
-...+..||+|+|=-+.... +.++ .......+++|.+||+-.-.+. ..++-.++..+.
T Consensus 17 l~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~ 96 (235)
T COG1407 17 LPLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLD 96 (235)
T ss_pred eccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhc
Confidence 34578999999996554332 2222 1122345789999999865443 234444443333
Q ss_pred hhCCCcEEEECCCcccchhhhhccc
Q psy16875 111 IKYPENFFLLRGNHECASINRIYGF 135 (324)
Q Consensus 111 ~~~p~~v~~LrGNHE~~~~~~~~gf 135 (324)
. . .+++++||||...-....++
T Consensus 97 ~-~--evi~i~GNHD~~i~~~~~~~ 118 (235)
T COG1407 97 E-R--EVIIIRGNHDNGIEEILPGF 118 (235)
T ss_pred c-C--cEEEEeccCCCccccccccC
Confidence 2 2 49999999999765444443
No 87
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=95.98 E-value=0.031 Score=48.02 Aligned_cols=46 Identities=22% Similarity=0.233 Sum_probs=32.1
Q ss_pred CCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhh
Q psy16875 81 PPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASIN 130 (324)
Q Consensus 81 ~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~ 130 (324)
.|++.+.+|||+.-.-....+...++-+ -|++.++++||||-.--.
T Consensus 44 ~p~D~lwhLGDl~~~~n~~~~a~~Iler----LnGrkhlv~GNhDk~~~~ 89 (186)
T COG4186 44 GPDDVLWHLGDLSSGANRERAAGLILER----LNGRKHLVPGNHDKCHPM 89 (186)
T ss_pred CccceEEEecccccccchhhHHHHHHHH----cCCcEEEeeCCCCCCccc
Confidence 4667788999998655544444444433 468999999999985433
No 88
>PLN02533 probable purple acid phosphatase
Probab=95.72 E-value=0.014 Score=58.19 Aligned_cols=71 Identities=15% Similarity=0.115 Sum_probs=40.7
Q ss_pred cCCEEEEeccCCCHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcH---HHHHHHHHhhhhCCCcEEEECCCcccch
Q psy16875 55 EAPLKICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSL---ETICLLLAYKIKYPENFFLLRGNHECAS 128 (324)
Q Consensus 55 ~~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~---evl~ll~~lk~~~p~~v~~LrGNHE~~~ 128 (324)
.-+++++||+|-. ......++.+.....+-+|++||+++-+.... +-..++..+....| ++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 3479999999632 22223333333334456778999997544321 12223333333344 889999999864
No 89
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=95.49 E-value=0.04 Score=54.00 Aligned_cols=73 Identities=21% Similarity=0.181 Sum_probs=50.3
Q ss_pred CEEEEeccCCC-------------HHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhC---CCcEEEE
Q psy16875 57 PLKICGDIHGQ-------------YTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKY---PENFFLL 120 (324)
Q Consensus 57 ~i~vvGDIHG~-------------~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~---p~~v~~L 120 (324)
|+..++|.|=- +.+|..+++.+.-...+-+|.-||+.|++.-|.+++..+.....+. .-.|++|
T Consensus 2 kilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~I 81 (390)
T COG0420 2 KILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVVI 81 (390)
T ss_pred eeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEEe
Confidence 67788888844 3444455555444444667789999999988888777665543222 1359999
Q ss_pred CCCcccchh
Q psy16875 121 RGNHECASI 129 (324)
Q Consensus 121 rGNHE~~~~ 129 (324)
.||||....
T Consensus 82 ~GNHD~~~~ 90 (390)
T COG0420 82 AGNHDSPSR 90 (390)
T ss_pred cCCCCchhc
Confidence 999999653
No 90
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=95.46 E-value=0.016 Score=52.69 Aligned_cols=73 Identities=18% Similarity=0.207 Sum_probs=43.8
Q ss_pred CCEEEEeccCCCHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHH-------------------------HHHHHHhh
Q psy16875 56 APLKICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLET-------------------------ICLLLAYK 110 (324)
Q Consensus 56 ~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~ev-------------------------l~ll~~lk 110 (324)
.+|.+++|.||+++.|.++...+.-.+.+-++|+||++-....+.|- ++-++..-
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 56999999999999999998876555678899999998654433332 22333332
Q ss_pred hhCCCcEEEECCCcccch
Q psy16875 111 IKYPENFFLLRGNHECAS 128 (324)
Q Consensus 111 ~~~p~~v~~LrGNHE~~~ 128 (324)
-..+-.+++|+||||...
T Consensus 86 ~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 86 GELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HCC-SEEEEE--TTS-SH
T ss_pred HhcCCcEEEecCCCCchH
Confidence 345556999999999954
No 91
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=95.41 E-value=0.023 Score=52.99 Aligned_cols=66 Identities=20% Similarity=0.184 Sum_probs=39.2
Q ss_pred CEEEEeccCCCH----------------HHHHHHHHhCCCCCCceEEE-eCcccCCCCCc-----------HHHHHHHHH
Q psy16875 57 PLKICGDIHGQY----------------TDLLRLFEYGGFPPDANYLF-LGDYVDRGKQS-----------LETICLLLA 108 (324)
Q Consensus 57 ~i~vvGDIHG~~----------------~~L~~il~~~~~~~~~~~vf-LGD~VDRG~~s-----------~evl~ll~~ 108 (324)
+|+.++|+||++ ..+..+++...-...+.+++ .||+++..+.+ ..++..+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 478899999986 33555665543322233333 69999876522 234555544
Q ss_pred hhhhCCCcEEEECCCcccc
Q psy16875 109 YKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 109 lk~~~p~~v~~LrGNHE~~ 127 (324)
+. . -++..||||..
T Consensus 82 ~g---~--d~~~lGNHe~d 95 (277)
T cd07410 82 LG---Y--DAGTLGNHEFN 95 (277)
T ss_pred cC---C--CEEeecccCcc
Confidence 43 2 24556999963
No 92
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.40 E-value=0.034 Score=49.60 Aligned_cols=66 Identities=18% Similarity=0.176 Sum_probs=41.9
Q ss_pred eccCCCHHHHHHHHHhCCCC-CCceEEEeCcccCCCCCcHHH-HHHHHHhhhhC---------------------CCcEE
Q psy16875 62 GDIHGQYTDLLRLFEYGGFP-PDANYLFLGDYVDRGKQSLET-ICLLLAYKIKY---------------------PENFF 118 (324)
Q Consensus 62 GDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~ev-l~ll~~lk~~~---------------------p~~v~ 118 (324)
=|++|+=.-|.++++.+-.. ..+.++||||++|.|--+-+- -..+.+++..+ .-.++
T Consensus 23 ld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 35577767777777765432 345678999999987543332 23344443322 13578
Q ss_pred EECCCcccc
Q psy16875 119 LLRGNHECA 127 (324)
Q Consensus 119 ~LrGNHE~~ 127 (324)
+|.||||.-
T Consensus 103 ~V~GNHDIG 111 (193)
T cd08164 103 NIAGNHDVG 111 (193)
T ss_pred EECCcccCC
Confidence 999999983
No 93
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=94.90 E-value=0.58 Score=46.98 Aligned_cols=197 Identities=18% Similarity=0.189 Sum_probs=103.2
Q ss_pred CEEEEeccCC-CH----HHHHHHHHhCCC----CCCceEEE-eCcccCC-CC-----------CcHHHHHHHHHhhhhCC
Q psy16875 57 PLKICGDIHG-QY----TDLLRLFEYGGF----PPDANYLF-LGDYVDR-GK-----------QSLETICLLLAYKIKYP 114 (324)
Q Consensus 57 ~i~vvGDIHG-~~----~~L~~il~~~~~----~~~~~~vf-LGD~VDR-G~-----------~s~evl~ll~~lk~~~p 114 (324)
.++.++|+|= .. +.+...++.++- .+..+|+. -||.||. |- +..|-.+.+..+..+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 4789999995 22 233333333322 23446665 6899994 21 22333444444444455
Q ss_pred C--cEEEECCCcccchhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEEEEcC-cEEEecCCCCCCcccHHHHHhhcCC
Q psy16875 115 E--NFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDE-KIFCCHGGLSPDLQMMEQIRRIMRP 191 (324)
Q Consensus 115 ~--~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~-~il~vHgGi~p~~~~~~~i~~i~r~ 191 (324)
. .+++.+||||.......--...+. ...++...+-.|-.=|....+++ .++..||- ++++|-..-..
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~----~kslf~~~n~~~v~NP~~~~l~G~~vL~~hG~------sidDii~~vP~ 376 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPEL----IKSLFSLNNLLFVSNPALVSLHGVDVLIYHGR------SIDDIIKLVPG 376 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchh----hcccccccceEecCCCcEEEECCEEEEEecCC------CHHHHHhhCCC
Confidence 5 478899999996543221121211 12233333334445566666665 58888885 66666543222
Q ss_pred CC--CCCchhHHHHhhcCCCCCCCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecCC
Q psy16875 192 TD--VPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAP 269 (324)
Q Consensus 192 ~~--~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~ 269 (324)
.+ .+...+.+=|.|..=.+...+-.+ .+.|.+| -|-=.---+.++.||+.. .|+....+.+++..+|-+
T Consensus 377 ~~~~~~~~ame~lLk~rHlaPtygg~~p-----~aP~~kD---~lVIeevPDv~~~Ghvh~-~g~~~y~gv~~vns~T~q 447 (481)
T COG1311 377 ADYDSPLKAMEELLKRRHLAPTYGGTLP-----IAPETKD---YLVIEEVPDVFHTGHVHK-FGTGVYEGVNLVNSGTWQ 447 (481)
T ss_pred CCccchHHHHHHHHHhcccCCCCCCccc-----cccCCcC---ceeeccCCcEEEEccccc-cceeEEeccceEEeeeec
Confidence 11 222223334455432211111000 1111111 111111257789999998 799998888899988888
Q ss_pred CCC
Q psy16875 270 NYC 272 (324)
Q Consensus 270 ~y~ 272 (324)
.+.
T Consensus 448 ~qT 450 (481)
T COG1311 448 EQT 450 (481)
T ss_pred chh
Confidence 764
No 94
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=94.36 E-value=0.1 Score=48.34 Aligned_cols=24 Identities=17% Similarity=0.137 Sum_probs=20.4
Q ss_pred HHHHHHHHHhCCCcEEEEeecccc
Q psy16875 228 ADVVSKFLHNHDLDLICRAHQVVD 251 (324)
Q Consensus 228 ~~~~~~fl~~~~~~~iIRgH~~~~ 251 (324)
.+.+.+++++.++++++-||.-..
T Consensus 190 ~~~l~~l~~~~~v~~vl~GH~H~~ 213 (277)
T cd07378 190 VDRLLPLLKKYKVDAYLSGHDHNL 213 (277)
T ss_pred HHHHHHHHHHcCCCEEEeCCcccc
Confidence 456788999999999999998764
No 95
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=94.09 E-value=0.11 Score=48.06 Aligned_cols=66 Identities=21% Similarity=0.147 Sum_probs=40.0
Q ss_pred CEEEEeccCCCH----------HHHHHHHHhCCCCCCceEEEeCcccCCCCCc-----HHHHHHHHHhhhhCCCcEEEEC
Q psy16875 57 PLKICGDIHGQY----------TDLLRLFEYGGFPPDANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLR 121 (324)
Q Consensus 57 ~i~vvGDIHG~~----------~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~~Lr 121 (324)
+|+-++|+||++ ..+..+++...-.+..-++..||+++..+.+ ..++..+-.+. -.+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----YDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----CcE-Ecc
Confidence 477899999974 4456666655433334455689999876543 23344443332 123 456
Q ss_pred CCcccc
Q psy16875 122 GNHECA 127 (324)
Q Consensus 122 GNHE~~ 127 (324)
||||..
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999963
No 96
>KOG3325|consensus
Probab=93.70 E-value=0.68 Score=39.59 Aligned_cols=120 Identities=23% Similarity=0.393 Sum_probs=81.9
Q ss_pred EEEEeccCC--CHHHHHHHHHhCCCCCC-ceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhcc
Q psy16875 58 LKICGDIHG--QYTDLLRLFEYGGFPPD-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 134 (324)
Q Consensus 58 i~vvGDIHG--~~~~L~~il~~~~~~~~-~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~g 134 (324)
+.++||+|= ...+|-.-|++.-.|+. +.++++|++. |.|++++|..+. +.++++||--|...
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~~------ 67 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDENL------ 67 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCccc------
Confidence 578999994 34455555555545655 4577899964 678999998875 68999999776631
Q ss_pred chHHHHHHhcHHHHHHHHHhhhcCCeEE--EEcC-cEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCC
Q psy16875 135 FYDECKRRYNIKLWKTFTDCFNCLPIAA--IIDE-KIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKD 211 (324)
Q Consensus 135 f~~e~~~~~~~~~~~~~~~~f~~LPla~--~i~~-~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~ 211 (324)
.-|..- .++. ++-|+||-. -+-|.||
T Consensus 68 ----------------------~yP~~kvvtvGqfkIG~chGhq--------------------------ViP~gd~--- 96 (183)
T KOG3325|consen 68 ----------------------KYPENKVVTVGQFKIGLCHGHQ--------------------------VIPWGDP--- 96 (183)
T ss_pred ----------------------cCCccceEEeccEEEEeecCcE--------------------------eecCCCH---
Confidence 112222 2233 689999852 1235555
Q ss_pred CCCcccCCCCCceecCHHHHHHHHHhCCCcEEEEeecccccCceEEcCceE
Q psy16875 212 VQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQL 262 (324)
Q Consensus 212 ~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~ 262 (324)
+++.-.-++.+++.++-||+..-+.|+ ++|++
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye--~eg~f 128 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYE--HEGKF 128 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEE--eCCcE
Confidence 367777888999999999999877776 35543
No 97
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=93.67 E-value=0.09 Score=49.57 Aligned_cols=66 Identities=24% Similarity=0.299 Sum_probs=41.5
Q ss_pred CEEEEeccCCCHH--------------HHHHHHHhCCCC-CCceEEEeCcccCCCCC-c-----HHHHHHHHHhhhhCCC
Q psy16875 57 PLKICGDIHGQYT--------------DLLRLFEYGGFP-PDANYLFLGDYVDRGKQ-S-----LETICLLLAYKIKYPE 115 (324)
Q Consensus 57 ~i~vvGDIHG~~~--------------~L~~il~~~~~~-~~~~~vfLGD~VDRG~~-s-----~evl~ll~~lk~~~p~ 115 (324)
+|+.+.|+||++. .+..+++..... ++.-+|..||+++..+. + ..++..+.++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 4788999999854 366666655432 23345568999987664 2 245566655542
Q ss_pred cEEEECCCcccc
Q psy16875 116 NFFLLRGNHECA 127 (324)
Q Consensus 116 ~v~~LrGNHE~~ 127 (324)
. .+..||||..
T Consensus 78 D-a~t~GNHefd 88 (288)
T cd07412 78 D-ASAVGNHEFD 88 (288)
T ss_pred e-eeeecccccc
Confidence 2 3555999974
No 98
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=92.54 E-value=0.25 Score=45.82 Aligned_cols=65 Identities=20% Similarity=0.138 Sum_probs=37.0
Q ss_pred CEEEEeccCCCHH----------------------HHHHHHHhCCCC-CCceE-EEeCcccCCCCCc-----HHHHHHHH
Q psy16875 57 PLKICGDIHGQYT----------------------DLLRLFEYGGFP-PDANY-LFLGDYVDRGKQS-----LETICLLL 107 (324)
Q Consensus 57 ~i~vvGDIHG~~~----------------------~L~~il~~~~~~-~~~~~-vfLGD~VDRG~~s-----~evl~ll~ 107 (324)
.|+.++|+||++. .+..+++..... ..+.+ +..||+++..+.+ ..++..+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 3667888888743 344455554322 23333 4589999877643 23444444
Q ss_pred HhhhhCCCcEEEECCCcccc
Q psy16875 108 AYKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 108 ~lk~~~p~~v~~LrGNHE~~ 127 (324)
.+. --.+. ||||..
T Consensus 82 ~~g-----~da~~-GNHefd 95 (264)
T cd07411 82 ALG-----VDAMV-GHWEFT 95 (264)
T ss_pred hhC-----CeEEe-cccccc
Confidence 432 23444 999974
No 99
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=91.91 E-value=0.4 Score=44.98 Aligned_cols=66 Identities=15% Similarity=0.117 Sum_probs=37.8
Q ss_pred CEEEEeccCCCH---------------------HHHHHHHHhCCCCCCc-eEEEeCcccCCCCC-----cHHHHHHHHHh
Q psy16875 57 PLKICGDIHGQY---------------------TDLLRLFEYGGFPPDA-NYLFLGDYVDRGKQ-----SLETICLLLAY 109 (324)
Q Consensus 57 ~i~vvGDIHG~~---------------------~~L~~il~~~~~~~~~-~~vfLGD~VDRG~~-----s~evl~ll~~l 109 (324)
.|+-++|+||++ ..+..+++........ -++..||+++..+. ...++..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 467789999874 4455555554322223 33347999987653 23344444443
Q ss_pred hhhCCCcEEEECCCcccc
Q psy16875 110 KIKYPENFFLLRGNHECA 127 (324)
Q Consensus 110 k~~~p~~v~~LrGNHE~~ 127 (324)
.. .+ +..||||..
T Consensus 82 g~----D~-~~lGNHefd 94 (281)
T cd07409 82 GY----DA-MTLGNHEFD 94 (281)
T ss_pred CC----CE-EEecccccc
Confidence 31 23 345999974
No 100
>KOG3662|consensus
Probab=90.74 E-value=0.46 Score=46.93 Aligned_cols=71 Identities=23% Similarity=0.339 Sum_probs=44.1
Q ss_pred CCEEEEeccC--CC---------H------HHHHHHHHhCCCCC-CceEEEeCcccCCCCCc--HHHHHHHHHhhhhCCC
Q psy16875 56 APLKICGDIH--GQ---------Y------TDLLRLFEYGGFPP-DANYLFLGDYVDRGKQS--LETICLLLAYKIKYPE 115 (324)
Q Consensus 56 ~~i~vvGDIH--G~---------~------~~L~~il~~~~~~~-~~~~vfLGD~VDRG~~s--~evl~ll~~lk~~~p~ 115 (324)
.++..|+|-| |+ + --|.+.+...-+.- .+-++||||++|-|... -|--..+.+++..++.
T Consensus 49 ~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~ 128 (410)
T KOG3662|consen 49 TKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGR 128 (410)
T ss_pred eEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCC
Confidence 4688888866 21 1 12334444433332 34567899999988754 3444555566555554
Q ss_pred ----cEEEECCCccc
Q psy16875 116 ----NFFLLRGNHEC 126 (324)
Q Consensus 116 ----~v~~LrGNHE~ 126 (324)
.+..+.||||-
T Consensus 129 k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 129 KGNIKVIYIAGNHDI 143 (410)
T ss_pred CCCCeeEEeCCcccc
Confidence 68899999997
No 101
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=90.24 E-value=8.7 Score=35.81 Aligned_cols=49 Identities=22% Similarity=0.293 Sum_probs=30.2
Q ss_pred CcEEEEeecccccCceEEcC--ceEEEEecCCCCCCCCCCcEEEEEEc-CCcceEEE
Q psy16875 240 LDLICRAHQVVDDGYEFFAK--RQLVTLFSAPNYCGEFDNAGGMMSVD-ETLMCSFQ 293 (324)
Q Consensus 240 ~~~iIRgH~~~~~G~~~~~~--~~~itifSa~~y~~~~~n~ga~l~i~-~~~~~~~~ 293 (324)
=..++-|||.. -|.+...+ ++-+.+.|.|.|. ..|.++.++ +++++...
T Consensus 204 PhVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs----~t~~~vlvdl~tLe~~~v 255 (257)
T cd07387 204 PHVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFS----KTGTAVLVNLRTLECEPI 255 (257)
T ss_pred CCEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcC----cCCEEEEEECCcCcEEEE
Confidence 46778899986 46655432 5667778888874 345444443 45555443
No 102
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=90.15 E-value=0.4 Score=53.79 Aligned_cols=66 Identities=18% Similarity=0.131 Sum_probs=40.8
Q ss_pred CEEEEeccCCCH---HHHHHHHHhCCCCCCceEEE-eCcccCCCCCc-----HHHHHHHHHhhhhCCCcEEEECCCcccc
Q psy16875 57 PLKICGDIHGQY---TDLLRLFEYGGFPPDANYLF-LGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 57 ~i~vvGDIHG~~---~~L~~il~~~~~~~~~~~vf-LGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~~LrGNHE~~ 127 (324)
.|+.++|+||++ ..+..+++...-...+.+++ .||+++..+.+ ..++.++-.+. --++..||||..
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEfd 736 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEFD 736 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEecccccc
Confidence 588999999885 44445555443222233333 79999987644 24555554443 235689999973
No 103
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=90.13 E-value=0.59 Score=43.82 Aligned_cols=72 Identities=22% Similarity=0.243 Sum_probs=41.2
Q ss_pred EEEEeccCCC---HHHHHHHHHhCCC--CCCceEEEeCcccCCCCCcH--H------HHHHHHHhhhhCCC-cEEEECCC
Q psy16875 58 LKICGDIHGQ---YTDLLRLFEYGGF--PPDANYLFLGDYVDRGKQSL--E------TICLLLAYKIKYPE-NFFLLRGN 123 (324)
Q Consensus 58 i~vvGDIHG~---~~~L~~il~~~~~--~~~~~~vfLGD~VDRG~~s~--e------vl~ll~~lk~~~p~-~v~~LrGN 123 (324)
..-.|+-. | ...+..+++.+.. +..+-+|+.||+++.+.... + .-.+...++..+|. .|+.+.||
T Consensus 40 ~~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 40 AGPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 33455543 3 3445555554432 24566788999998876431 1 11222233333333 59999999
Q ss_pred cccchhh
Q psy16875 124 HECASIN 130 (324)
Q Consensus 124 HE~~~~~ 130 (324)
||....+
T Consensus 119 HD~~p~~ 125 (296)
T cd00842 119 HDSYPVN 125 (296)
T ss_pred CCCCccc
Confidence 9986543
No 104
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=89.22 E-value=0.85 Score=40.29 Aligned_cols=70 Identities=20% Similarity=0.254 Sum_probs=40.9
Q ss_pred CCceEEEeCccc--CCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHhcHHHHHHHHHhhhcCC
Q psy16875 82 PDANYLFLGDYV--DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 159 (324)
Q Consensus 82 ~~~~~vfLGD~V--DRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP 159 (324)
+++.++.-||+- -|=+...+-+.++-+ -|+.=+++|||||.+.-.. ..+...+... .-..++.|..+.
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~~Dl~~i~~----LPG~K~m~rGNHDYWw~s~-----skl~n~lp~~-l~~~n~~f~l~n 112 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAEEDLRFIGD----LPGTKYMIRGNHDYWWSSI-----SKLNNALPPI-LFYLNNGFELLN 112 (230)
T ss_pred hhhEEEecccchhheechhhhhhhhhhhc----CCCcEEEEecCCccccchH-----HHHHhhcCch-HhhhccceeEee
Confidence 344455569974 344455555555544 4788899999999976421 1222223322 334567777777
Q ss_pred eE
Q psy16875 160 IA 161 (324)
Q Consensus 160 la 161 (324)
+|
T Consensus 113 ~a 114 (230)
T COG1768 113 YA 114 (230)
T ss_pred EE
Confidence 44
No 105
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=89.04 E-value=0.84 Score=42.16 Aligned_cols=56 Identities=21% Similarity=0.113 Sum_probs=35.2
Q ss_pred CCHHHHHHHHHhCCCCCCc-eEEEeCcccCCCCC-----cHHHHHHHHHhhhhCCCcEEEECCCccc
Q psy16875 66 GQYTDLLRLFEYGGFPPDA-NYLFLGDYVDRGKQ-----SLETICLLLAYKIKYPENFFLLRGNHEC 126 (324)
Q Consensus 66 G~~~~L~~il~~~~~~~~~-~~vfLGD~VDRG~~-----s~evl~ll~~lk~~~p~~v~~LrGNHE~ 126 (324)
|.+..+..+++...-...+ -++..||+++.++. ...++..+..+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 4567777777765433333 45557999987753 245556555543 23557899997
No 106
>KOG3339|consensus
Probab=88.50 E-value=5.1 Score=35.55 Aligned_cols=85 Identities=18% Similarity=0.304 Sum_probs=66.4
Q ss_pred ceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccch----------------HHHHHHhcHHH
Q psy16875 84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY----------------DECKRRYNIKL 147 (324)
Q Consensus 84 ~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~----------------~e~~~~~~~~~ 147 (324)
..+||||- |-+.-|.+.++-.|+.+|-.+.++ .|+-|.+..++...|. .|....|-..+
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 45889985 899999999999999888777665 7999998877554442 33444555678
Q ss_pred HHHHHHhhhcCCeEEEEcCcEEEecC
Q psy16875 148 WKTFTDCFNCLPIAAIIDEKIFCCHG 173 (324)
Q Consensus 148 ~~~~~~~f~~LPla~~i~~~il~vHg 173 (324)
|..+...+.++++...+-..++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 88889999999999998777777776
No 107
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=87.55 E-value=1 Score=39.90 Aligned_cols=72 Identities=11% Similarity=0.087 Sum_probs=40.5
Q ss_pred EEEEeccCCC-----HHHHHHHHHhCC-CCCCceEEEeCcccCCCCCcH----------HHHHHHHHhh---hh--CCCc
Q psy16875 58 LKICGDIHGQ-----YTDLLRLFEYGG-FPPDANYLFLGDYVDRGKQSL----------ETICLLLAYK---IK--YPEN 116 (324)
Q Consensus 58 i~vvGDIHG~-----~~~L~~il~~~~-~~~~~~~vfLGD~VDRG~~s~----------evl~ll~~lk---~~--~p~~ 116 (324)
|++++|+|=. ++.|.++|+... ....+.+|++|+++|.-.... .....+..+. .. .--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5678888765 677788888776 555567899999999632211 1111111211 11 2357
Q ss_pred EEEECCCcccchh
Q psy16875 117 FFLLRGNHECASI 129 (324)
Q Consensus 117 v~~LrGNHE~~~~ 129 (324)
|+++.|+||-...
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998654
No 108
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=86.68 E-value=1.4 Score=41.22 Aligned_cols=67 Identities=16% Similarity=0.181 Sum_probs=47.7
Q ss_pred CEEEEeccCCC--HHHHHHHHHhCCCCCC-ceEEEeCcccCCC-CCcHHHHHHHHHhhhhCCCcEEEECCCcccch
Q psy16875 57 PLKICGDIHGQ--YTDLLRLFEYGGFPPD-ANYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECAS 128 (324)
Q Consensus 57 ~i~vvGDIHG~--~~~L~~il~~~~~~~~-~~~vfLGD~VDRG-~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~ 128 (324)
+|.++|||=|. ...+...|..+..... +-+|..||...-| .-+.++...|..+.. .++.+ |||+...
T Consensus 2 ~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~Dk 72 (266)
T TIGR00282 2 KFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWFQ 72 (266)
T ss_pred eEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhccC
Confidence 68999999999 5667777776554333 3344579999766 467788888887653 45555 9999853
No 109
>KOG2863|consensus
Probab=85.46 E-value=2.7 Score=40.96 Aligned_cols=72 Identities=25% Similarity=0.382 Sum_probs=45.8
Q ss_pred CEEEEeccCCCHHHHHH---HHHhCCCCCCceEEEeCcccC-CCC---CcHHH---HHHHH------HhhhhCCCcEEEE
Q psy16875 57 PLKICGDIHGQYTDLLR---LFEYGGFPPDANYLFLGDYVD-RGK---QSLET---ICLLL------AYKIKYPENFFLL 120 (324)
Q Consensus 57 ~i~vvGDIHG~~~~L~~---il~~~~~~~~~~~vfLGD~VD-RG~---~s~ev---l~ll~------~lk~~~p~~v~~L 120 (324)
||.|-|=-||.++.+-+ ..++.|-.+.+-++++||+=. |.. +++.| ...|. .=....|---++|
T Consensus 2 rIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIFI 81 (456)
T KOG2863|consen 2 RIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFI 81 (456)
T ss_pred ceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEEe
Confidence 78999999999998874 445555556677889999853 211 12111 11111 1123356566889
Q ss_pred CCCcccch
Q psy16875 121 RGNHECAS 128 (324)
Q Consensus 121 rGNHE~~~ 128 (324)
=||||.+.
T Consensus 82 GGNHEAsn 89 (456)
T KOG2863|consen 82 GGNHEASN 89 (456)
T ss_pred cCchHHHH
Confidence 99999964
No 110
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=85.36 E-value=1.2 Score=41.92 Aligned_cols=66 Identities=20% Similarity=0.097 Sum_probs=37.4
Q ss_pred CEEEEeccCCCHH----------------HHHHHHHh-CCC-CCCceEEEeCcccCCCCCc-------HHHHHHHHHhhh
Q psy16875 57 PLKICGDIHGQYT----------------DLLRLFEY-GGF-PPDANYLFLGDYVDRGKQS-------LETICLLLAYKI 111 (324)
Q Consensus 57 ~i~vvGDIHG~~~----------------~L~~il~~-~~~-~~~~~~vfLGD~VDRG~~s-------~evl~ll~~lk~ 111 (324)
.|+-+.|+||++. .+.+.++. ... .++.-++..||.++..+.+ .-++.++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg- 85 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP- 85 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC-
Confidence 5888999999863 22222221 111 1222344579999865433 22344444443
Q ss_pred hCCCcEEEECCCcccc
Q psy16875 112 KYPENFFLLRGNHECA 127 (324)
Q Consensus 112 ~~p~~v~~LrGNHE~~ 127 (324)
-=.+..||||..
T Consensus 86 ----yDa~tlGNHEFd 97 (282)
T cd07407 86 ----YDLLTIGNHELY 97 (282)
T ss_pred ----CcEEeecccccC
Confidence 346778999994
No 111
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=85.03 E-value=1.4 Score=41.48 Aligned_cols=66 Identities=17% Similarity=0.035 Sum_probs=35.7
Q ss_pred CEEEEeccCCCHHH----------HHHHHHhCCC-----CCCceEEEeCcccCCCCC-----cHHHHHHHHHhhhhCCCc
Q psy16875 57 PLKICGDIHGQYTD----------LLRLFEYGGF-----PPDANYLFLGDYVDRGKQ-----SLETICLLLAYKIKYPEN 116 (324)
Q Consensus 57 ~i~vvGDIHG~~~~----------L~~il~~~~~-----~~~~~~vfLGD~VDRG~~-----s~evl~ll~~lk~~~p~~ 116 (324)
.|+.+.|+||++.. +..+++.... .++.-++-.||.+...+. ...++.++-++.. .
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~----D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY----D 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC----c
Confidence 46789999998533 3344443321 222223347999843332 2334455555442 2
Q ss_pred EEEECCCcccc
Q psy16875 117 FFLLRGNHECA 127 (324)
Q Consensus 117 v~~LrGNHE~~ 127 (324)
+ +..||||..
T Consensus 78 a-~~~GNHEfD 87 (285)
T cd07405 78 A-MAVGNHEFD 87 (285)
T ss_pred E-Eeecccccc
Confidence 3 344999974
No 112
>KOG1432|consensus
Probab=84.43 E-value=2.5 Score=40.84 Aligned_cols=71 Identities=18% Similarity=0.174 Sum_probs=41.5
Q ss_pred CEEEEeccCCCHH-----------------HHH--HHHHh-CCCCCCceEEEeCcccCCCCCc---HHHHHHHHHhhhhC
Q psy16875 57 PLKICGDIHGQYT-----------------DLL--RLFEY-GGFPPDANYLFLGDYVDRGKQS---LETICLLLAYKIKY 113 (324)
Q Consensus 57 ~i~vvGDIHG~~~-----------------~L~--~il~~-~~~~~~~~~vfLGD~VDRG~~s---~evl~ll~~lk~~~ 113 (324)
+|+.|.|+|=.+. |+. ..++. +.....+-+||+||.|+- ... ..++....+=.+.+
T Consensus 55 KIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~ 133 (379)
T KOG1432|consen 55 KILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDR 133 (379)
T ss_pred EEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhc
Confidence 5899999996554 221 11111 112234668899999986 322 33333333334444
Q ss_pred CCcEEEECCCcccch
Q psy16875 114 PENFFLLRGNHECAS 128 (324)
Q Consensus 114 p~~v~~LrGNHE~~~ 128 (324)
.--...+.||||...
T Consensus 134 ~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 134 KIPWAAVLGNHDDES 148 (379)
T ss_pred CCCeEEEeccccccc
Confidence 445788999999964
No 113
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=84.21 E-value=2.5 Score=39.34 Aligned_cols=67 Identities=16% Similarity=0.191 Sum_probs=44.0
Q ss_pred CEEEEeccCCCHH--HHHHHHHhCCCCCCceEE-EeCcccCCC-CCcHHHHHHHHHhhhhCCCcEEEECCCcccch
Q psy16875 57 PLKICGDIHGQYT--DLLRLFEYGGFPPDANYL-FLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECAS 128 (324)
Q Consensus 57 ~i~vvGDIHG~~~--~L~~il~~~~~~~~~~~v-fLGD~VDRG-~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~ 128 (324)
+|.+||||=|.-. .+...|.........+++ -.||..--| .-+.++...|..+.. .+..+ ||||...
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD~ 71 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWDK 71 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccCc
Confidence 5789999999853 445555554332223344 479998766 467788888877653 34444 9998743
No 114
>KOG2476|consensus
Probab=83.48 E-value=2.7 Score=42.07 Aligned_cols=69 Identities=20% Similarity=0.383 Sum_probs=52.4
Q ss_pred cCCEEEEeccCCCHHHHHHHHHhCCCC--CCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCc
Q psy16875 55 EAPLKICGDIHGQYTDLLRLFEYGGFP--PDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 124 (324)
Q Consensus 55 ~~~i~vvGDIHG~~~~L~~il~~~~~~--~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNH 124 (324)
+.+|.|+||+-|+++.|.+-++.+... +-+-++++|++.+--.+..|++.+...- ...|-.++++=+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 468999999999999998777665433 2456778999999877788887776553 35677778877665
No 115
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=83.37 E-value=1.7 Score=44.40 Aligned_cols=68 Identities=24% Similarity=0.240 Sum_probs=42.1
Q ss_pred CCEEEEeccCCCHH------------HHH---HHHHhCCCCCCceEEE-eCcccCCCC------CcHHHHHHHHHhhhhC
Q psy16875 56 APLKICGDIHGQYT------------DLL---RLFEYGGFPPDANYLF-LGDYVDRGK------QSLETICLLLAYKIKY 113 (324)
Q Consensus 56 ~~i~vvGDIHG~~~------------~L~---~il~~~~~~~~~~~vf-LGD~VDRG~------~s~evl~ll~~lk~~~ 113 (324)
-+|+-..|+||++. -+. .+++...-.....+++ .||+++..+ .....+.+|-.++.
T Consensus 27 l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y-- 104 (517)
T COG0737 27 LTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY-- 104 (517)
T ss_pred EEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC--
Confidence 47888999999998 232 2333322222233333 799999844 34456677666652
Q ss_pred CCcEEEECCCcccch
Q psy16875 114 PENFFLLRGNHECAS 128 (324)
Q Consensus 114 p~~v~~LrGNHE~~~ 128 (324)
=....||||.-.
T Consensus 105 ---Da~tiGNHEFd~ 116 (517)
T COG0737 105 ---DAMTLGNHEFDY 116 (517)
T ss_pred ---cEEeeccccccc
Confidence 356779999954
No 116
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=82.06 E-value=2 Score=45.23 Aligned_cols=68 Identities=15% Similarity=0.086 Sum_probs=41.9
Q ss_pred cCCEEEEeccCCCHHH----------------HHHHHHhCCCC-CCceEEEeCcccCCCCCcH-------------HHHH
Q psy16875 55 EAPLKICGDIHGQYTD----------------LLRLFEYGGFP-PDANYLFLGDYVDRGKQSL-------------ETIC 104 (324)
Q Consensus 55 ~~~i~vvGDIHG~~~~----------------L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~-------------evl~ 104 (324)
.-+|+-..|+||++.. +..+++...-. ++.-+|-.||++...+.+- -++.
T Consensus 25 ~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~ 104 (649)
T PRK09420 25 DLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYK 104 (649)
T ss_pred eEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHH
Confidence 4578899999998643 33344433211 2334555899998666431 2556
Q ss_pred HHHHhhhhCCCcEEEECCCcccc
Q psy16875 105 LLLAYKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 105 ll~~lk~~~p~~v~~LrGNHE~~ 127 (324)
.+-.|. -=....||||.-
T Consensus 105 amN~lg-----yDa~tlGNHEFd 122 (649)
T PRK09420 105 AMNTLD-----YDVGNLGNHEFN 122 (649)
T ss_pred HHHhcC-----CcEEeccchhhh
Confidence 665554 246778999974
No 117
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=80.98 E-value=2.3 Score=44.64 Aligned_cols=67 Identities=16% Similarity=0.083 Sum_probs=40.0
Q ss_pred CCEEEEeccCCCHHH----------------HHHHHHhCCCC-CCceEEEeCcccCCCCCc-------------HHHHHH
Q psy16875 56 APLKICGDIHGQYTD----------------LLRLFEYGGFP-PDANYLFLGDYVDRGKQS-------------LETICL 105 (324)
Q Consensus 56 ~~i~vvGDIHG~~~~----------------L~~il~~~~~~-~~~~~vfLGD~VDRG~~s-------------~evl~l 105 (324)
-+|+-..|+||++.. +..+++...-. ++.-+|-.||.+...+.+ .-++.+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 367889999999643 33444443221 233344589999865533 234555
Q ss_pred HHHhhhhCCCcEEEECCCcccc
Q psy16875 106 LLAYKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 106 l~~lk~~~p~~v~~LrGNHE~~ 127 (324)
+-.|. -=....||||.-
T Consensus 83 mN~lg-----yDa~tlGNHEFd 99 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEFN 99 (626)
T ss_pred HhhcC-----ccEEeccccccc
Confidence 55553 235678999963
No 118
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=80.63 E-value=3 Score=39.87 Aligned_cols=66 Identities=21% Similarity=0.086 Sum_probs=39.4
Q ss_pred CEEEEeccCCCHH------HHHHHHHhCCC-----CCCceEEEeCcccCCCCC-------------cHHHHHHHHHhhhh
Q psy16875 57 PLKICGDIHGQYT------DLLRLFEYGGF-----PPDANYLFLGDYVDRGKQ-------------SLETICLLLAYKIK 112 (324)
Q Consensus 57 ~i~vvGDIHG~~~------~L~~il~~~~~-----~~~~~~vfLGD~VDRG~~-------------s~evl~ll~~lk~~ 112 (324)
.|+-+.|+||++. .+..+++.... .++.-++..||.+.-++. ...++.++-++..
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~- 80 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV- 80 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC-
Confidence 3667899999953 44334443321 223334457999875543 3455666666542
Q ss_pred CCCcEEEECCCcccc
Q psy16875 113 YPENFFLLRGNHECA 127 (324)
Q Consensus 113 ~p~~v~~LrGNHE~~ 127 (324)
=.+..||||.-
T Consensus 81 ----Da~tlGNHEFD 91 (313)
T cd08162 81 ----QAIALGNHEFD 91 (313)
T ss_pred ----cEEeccccccc
Confidence 35678999973
No 119
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=80.44 E-value=2.3 Score=47.88 Aligned_cols=67 Identities=19% Similarity=0.177 Sum_probs=39.5
Q ss_pred CCEEEEeccCCCHH----------------HHHHHHHhCCCCCCceEEE-eCcccCCCCC--------------cHHHHH
Q psy16875 56 APLKICGDIHGQYT----------------DLLRLFEYGGFPPDANYLF-LGDYVDRGKQ--------------SLETIC 104 (324)
Q Consensus 56 ~~i~vvGDIHG~~~----------------~L~~il~~~~~~~~~~~vf-LGD~VDRG~~--------------s~evl~ 104 (324)
-+|+-..|+||++. .+..+++...-.....+++ .||++...+. ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 36899999999863 3334444432222233444 7999986652 123445
Q ss_pred HHHHhhhhCCCcEEEECCCcccc
Q psy16875 105 LLLAYKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 105 ll~~lk~~~p~~v~~LrGNHE~~ 127 (324)
.+-.+. -=....||||.-
T Consensus 122 ~mN~lg-----yDa~~lGNHEFd 139 (1163)
T PRK09419 122 AMNALG-----YDAGTLGNHEFN 139 (1163)
T ss_pred HHhhcC-----ccEEeecccccc
Confidence 444443 235668999973
No 120
>KOG0918|consensus
Probab=80.13 E-value=0.053 Score=52.92 Aligned_cols=193 Identities=9% Similarity=-0.148 Sum_probs=113.8
Q ss_pred CceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHHHHh----cHHHHHHHHHhhhcC
Q psy16875 83 DANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY----NIKLWKTFTDCFNCL 158 (324)
Q Consensus 83 ~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~----~~~~~~~~~~~f~~L 158 (324)
.-..|+++++.+++.+.++.+.+-+..+..+-.+-...++||+.. +++++++.-.- ...+++..++-++..
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCccc
Confidence 346789999999999999999988888888777888899999543 33333321111 113445566777778
Q ss_pred CeEEEEcCcEEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCC----CCCcccCCCCCceecCHHH--HH
Q psy16875 159 PIAAIIDEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKD----VQGWGENDRGVSFTFGADV--VS 232 (324)
Q Consensus 159 Pla~~i~~~il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~----~~~~~~~~rg~~~~fg~~~--~~ 232 (324)
+..++.+ .+++.||+..|.......+..++-.. ..+..-..+ .|-++... ...|.. ++....||.+. .-
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~-lGd~~gn~k-g~f~llD~~~~~k~tw~~--~~~~p~~gyDfwyqp 197 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSHCLASGNVMVSC-LGDAEGNAK-GGFLLLDSDFNEKGTWEK--PGHSPLFGYDFWYQP 197 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccccccCCCeeEEe-ecccccCCc-CCeEEecCccceeccccc--CCCccccccceeecc
Confidence 8888765 89999999999876544443322110 001000000 12222211 111211 11222223222 22
Q ss_pred HHHHhCCCcEEEEeecccccCceEEcCceEEEEecCCCCCCCCCCcEEEEEEcCC
Q psy16875 233 KFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDET 287 (324)
Q Consensus 233 ~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~~y~~~~~n~ga~l~i~~~ 287 (324)
.+....+.+...+.|.....+...+.++ .+.++..-|.-...+.++.+.++.+
T Consensus 198 r~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 198 RHNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred ccceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCC
Confidence 3444455566667777654444455565 7778888887767788888888775
No 121
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=79.73 E-value=1.4 Score=44.20 Aligned_cols=41 Identities=24% Similarity=0.382 Sum_probs=33.7
Q ss_pred ceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchh
Q psy16875 84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 129 (324)
Q Consensus 84 ~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~ 129 (324)
+.+-.+||+-||||++-.+++.|..+ ..+-+--||||-.++
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~y-----hsvDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINY-----HSVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhc-----ccccccccCcceEEe
Confidence 34667999999999999999999875 357778899998654
No 122
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=77.76 E-value=8.4 Score=36.52 Aligned_cols=73 Identities=14% Similarity=0.239 Sum_probs=48.1
Q ss_pred CCEEEEeccCCC----HHHHHHHHHhCC-CCC----CceEEEeCcccCCC----CCc----HHHHHHHHHh-hhhCC---
Q psy16875 56 APLKICGDIHGQ----YTDLLRLFEYGG-FPP----DANYLFLGDYVDRG----KQS----LETICLLLAY-KIKYP--- 114 (324)
Q Consensus 56 ~~i~vvGDIHG~----~~~L~~il~~~~-~~~----~~~~vfLGD~VDRG----~~s----~evl~ll~~l-k~~~p--- 114 (324)
..++|+||+|=+ ++.|.++|+... ..+ ...+||+|+++-+. ..+ .+-++-|..+ ..+||
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 358999999954 788888888762 212 34588999999763 222 2334444432 22344
Q ss_pred --CcEEEECCCcccch
Q psy16875 115 --ENFFLLRGNHECAS 128 (324)
Q Consensus 115 --~~v~~LrGNHE~~~ 128 (324)
.++++|.|-.|-+.
T Consensus 108 ~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 108 EHCYLIFIPGINDPCA 123 (291)
T ss_pred hcCeEEEECCCCCCCc
Confidence 68999999999753
No 123
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=77.34 E-value=5.7 Score=31.29 Aligned_cols=41 Identities=20% Similarity=0.374 Sum_probs=28.3
Q ss_pred HHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeee
Q psy16875 10 YLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLEL 54 (324)
Q Consensus 10 ~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~ 54 (324)
+++..+++.. +.++ .++...+..|+.++.++|+++|+++++
T Consensus 55 efv~~mie~F--K~~K--~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 55 EFVKAMIEWF--KNQK--KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHHH--HCT------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHHH--HhCC--CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 4556665543 2344 477899999999999999999999975
No 124
>KOG1378|consensus
Probab=76.50 E-value=3.8 Score=41.09 Aligned_cols=34 Identities=6% Similarity=0.076 Sum_probs=27.2
Q ss_pred HHHHHHHHhCCCcEEEEeecccccCceEEcCceE
Q psy16875 229 DVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQL 262 (324)
Q Consensus 229 ~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~ 262 (324)
..+++.+-++++++++-||.-.=++.....+.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 4699999999999999999987666555556544
No 125
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=74.90 E-value=4.6 Score=43.67 Aligned_cols=67 Identities=19% Similarity=0.097 Sum_probs=40.1
Q ss_pred CCEEEEeccCCCHHH----------------HHHHHHhCCC-CCCceEEEeCcccCCCCCc--------------HHHHH
Q psy16875 56 APLKICGDIHGQYTD----------------LLRLFEYGGF-PPDANYLFLGDYVDRGKQS--------------LETIC 104 (324)
Q Consensus 56 ~~i~vvGDIHG~~~~----------------L~~il~~~~~-~~~~~~vfLGD~VDRG~~s--------------~evl~ 104 (324)
-+|+-..|+||++.. +..+++...- .++.-+|-.||++...+.+ .-++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 468889999999642 2233333321 1233355589999865432 12566
Q ss_pred HHHHhhhhCCCcEEEECCCcccc
Q psy16875 105 LLLAYKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 105 ll~~lk~~~p~~v~~LrGNHE~~ 127 (324)
++-.|. --....||||.-
T Consensus 196 amN~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 196 ALEALG-----FDAGTLGNHEFN 213 (814)
T ss_pred HHhccC-----CCEEEechhhcc
Confidence 665554 236778999974
No 126
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=74.57 E-value=29 Score=35.09 Aligned_cols=69 Identities=20% Similarity=0.300 Sum_probs=43.8
Q ss_pred HHHHHHHHHhCCCc----EEEEeeccccc--Cce-EEcCceEEEEec--CCCCCCCCCCcEEEEEEcCCcceEEEEEcc
Q psy16875 228 ADVVSKFLHNHDLD----LICRAHQVVDD--GYE-FFAKRQLVTLFS--APNYCGEFDNAGGMMSVDETLMCSFQILKP 297 (324)
Q Consensus 228 ~~~~~~fl~~~~~~----~iIRgH~~~~~--G~~-~~~~~~~itifS--a~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 297 (324)
++...+.|+..|++ .||-||+|+.+ |=. .-++||+|.|-. |..|....+=+|--| +.++...+.....|
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskAYqs~TgiAGYTl-lYNSfGmqLvsHq~ 592 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKAYQSTTGIAGYTL-LYNSFGMQLVSHQP 592 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhhhhcccccceeEe-eecchhhhHhhcCc
Confidence 45567888888887 89999999964 333 347899998843 334665544455444 34444444444443
No 127
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=72.76 E-value=5.7 Score=40.94 Aligned_cols=67 Identities=18% Similarity=0.059 Sum_probs=36.6
Q ss_pred CCEEEEeccCCCHH----------HHHHHHHhCC-----CCCCceEEEeCcccCCCCCc-----HHHHHHHHHhhhhCCC
Q psy16875 56 APLKICGDIHGQYT----------DLLRLFEYGG-----FPPDANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPE 115 (324)
Q Consensus 56 ~~i~vvGDIHG~~~----------~L~~il~~~~-----~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p~ 115 (324)
-.|+-+.|+||++. .+..+++... ..++.-+|.-||++...+.+ .-+++++-.+..
T Consensus 35 ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~---- 110 (551)
T PRK09558 35 ITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGY---- 110 (551)
T ss_pred EEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCC----
Confidence 36888999999874 2233343321 12233344579998643322 233444544432
Q ss_pred cEEEECCCcccc
Q psy16875 116 NFFLLRGNHECA 127 (324)
Q Consensus 116 ~v~~LrGNHE~~ 127 (324)
.+ ...||||.-
T Consensus 111 Da-~tlGNHEFD 121 (551)
T PRK09558 111 DA-MAVGNHEFD 121 (551)
T ss_pred CE-EcccccccC
Confidence 23 445999974
No 128
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=71.28 E-value=7.7 Score=40.07 Aligned_cols=65 Identities=22% Similarity=0.088 Sum_probs=37.1
Q ss_pred EEEEeccCCCHHH---------------------HHHHHHhCCC-CCCceEEEeCcccCCCCCc-----HHHHHHHHHhh
Q psy16875 58 LKICGDIHGQYTD---------------------LLRLFEYGGF-PPDANYLFLGDYVDRGKQS-----LETICLLLAYK 110 (324)
Q Consensus 58 i~vvGDIHG~~~~---------------------L~~il~~~~~-~~~~~~vfLGD~VDRG~~s-----~evl~ll~~lk 110 (324)
|+-+.|+||++.. +..+++...- .++.-+|.-||.+...+.+ ...+.++-++.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 5667888887543 3333443321 2333445579999765432 33455554443
Q ss_pred hhCCCcEEEECCCcccc
Q psy16875 111 IKYPENFFLLRGNHECA 127 (324)
Q Consensus 111 ~~~p~~v~~LrGNHE~~ 127 (324)
--....||||.-
T Consensus 83 -----~Da~~lGNHEFd 94 (550)
T TIGR01530 83 -----FDFFTLGNHEFD 94 (550)
T ss_pred -----CCEEEecccccc
Confidence 246778999974
No 129
>KOG3947|consensus
Probab=67.35 E-value=8 Score=36.41 Aligned_cols=66 Identities=24% Similarity=0.275 Sum_probs=41.0
Q ss_pred CCEEEEeccCCCHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCC-CcEEEECCCcccchh
Q psy16875 56 APLKICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYP-ENFFLLRGNHECASI 129 (324)
Q Consensus 56 ~~i~vvGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p-~~v~~LrGNHE~~~~ 129 (324)
.+++.|+|.|+...+.. ..++.+-++-+||+-.-|. +-||..+=-.+. ..| .+=+.|+||||...-
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~g-slph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLG-SLPHEYKIVIAGNHELTFD 128 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhc-cCcceeeEEEeeccceeec
Confidence 36899999998654433 2455566677999976553 445544432221 122 234789999998543
No 130
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=67.13 E-value=11 Score=37.40 Aligned_cols=72 Identities=10% Similarity=0.012 Sum_probs=39.4
Q ss_pred CCEEEEeccCCCHHHHHH---HHHhC-CCCCCceEEEeCcccCCCCCcHH------HHHHHHHhhh-hCCCcEEEECCCc
Q psy16875 56 APLKICGDIHGQYTDLLR---LFEYG-GFPPDANYLFLGDYVDRGKQSLE------TICLLLAYKI-KYPENFFLLRGNH 124 (324)
Q Consensus 56 ~~i~vvGDIHG~~~~L~~---il~~~-~~~~~~~~vfLGD~VDRG~~s~e------vl~ll~~lk~-~~p~~v~~LrGNH 124 (324)
-+++++||-=+-...-.. .+... ...+.+-+|-+||-++.|..++. .++-++.-.. ...-..+++.|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 368999995332222111 22222 12334556669999888877543 3444432211 0112589999999
Q ss_pred ccc
Q psy16875 125 ECA 127 (324)
Q Consensus 125 E~~ 127 (324)
|..
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 973
No 131
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=62.18 E-value=11 Score=40.57 Aligned_cols=67 Identities=18% Similarity=0.098 Sum_probs=39.2
Q ss_pred cCCEEEEeccCCCHHH----------------HHHHHHhCCC-CCCceEEEeCcccCCCCCc------------------
Q psy16875 55 EAPLKICGDIHGQYTD----------------LLRLFEYGGF-PPDANYLFLGDYVDRGKQS------------------ 99 (324)
Q Consensus 55 ~~~i~vvGDIHG~~~~----------------L~~il~~~~~-~~~~~~vfLGD~VDRG~~s------------------ 99 (324)
.-+|+-..|+||++.. +..+++...- .++.-+|-.||++.-.+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 3479999999999632 2333333321 1233455579988543322
Q ss_pred -HHHHHHHHHhhhhCCCcEEEECCCccc
Q psy16875 100 -LETICLLLAYKIKYPENFFLLRGNHEC 126 (324)
Q Consensus 100 -~evl~ll~~lk~~~p~~v~~LrGNHE~ 126 (324)
.-++.++-.|. -=....||||.
T Consensus 119 ~~p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccC-----CCEEecccccc
Confidence 23555555554 23567899996
No 132
>KOG2310|consensus
Probab=58.13 E-value=29 Score=35.73 Aligned_cols=54 Identities=19% Similarity=0.176 Sum_probs=37.9
Q ss_pred CCEEEEeccCC------------CHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHh
Q psy16875 56 APLKICGDIHG------------QYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAY 109 (324)
Q Consensus 56 ~~i~vvGDIHG------------~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~l 109 (324)
-+|.|-.|+|= .+..|..||..+.-...+-++.=||+++-..-|..++--.+.+
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHH
Confidence 47889999984 3678888888765544454555699999887777765544443
No 133
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=53.98 E-value=50 Score=24.91 Aligned_cols=72 Identities=13% Similarity=0.032 Sum_probs=47.7
Q ss_pred eecCCEEEEeccCCCHHHHHHHHHhCCC--CCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCc
Q psy16875 53 ELEAPLKICGDIHGQYTDLLRLFEYGGF--PPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 124 (324)
Q Consensus 53 ~~~~~i~vvGDIHG~~~~L~~il~~~~~--~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNH 124 (324)
.....+.||=|---|.+.+..+++.+.. +....++.+|+.-|+|....+....+-.+...+.+.+++...|+
T Consensus 9 ~~~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 9 REPNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp EEETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred eeCCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 3334577888877788888888876632 34455677999999888888766666666666666666655543
No 134
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=53.41 E-value=1.4e+02 Score=25.61 Aligned_cols=102 Identities=21% Similarity=0.335 Sum_probs=59.7
Q ss_pred EEEeccCCCHHHHHHHHHh-CCC------------CCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcc
Q psy16875 59 KICGDIHGQYTDLLRLFEY-GGF------------PPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125 (324)
Q Consensus 59 ~vvGDIHG~~~~L~~il~~-~~~------------~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE 125 (324)
++.+-.+||-..+.+.+.. ++- ..+.++||+|=.+|+|.-.-++..+|-.|+ +.+|++. |
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF-~--- 74 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALF-G--- 74 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEE-E---
Confidence 4566667777766554432 222 234679999999999999999999998875 3455433 1
Q ss_pred cchhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEEEEcCcEEEecCCCCCCc
Q psy16875 126 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDL 179 (324)
Q Consensus 126 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~~~il~vHgGi~p~~ 179 (324)
..|+.. ...|...+.+....++..= ..+++ .|+|+|-++|.+
T Consensus 75 ------T~G~~~--~s~~~~~~~~~~~~~~~~~--~~~lg--~f~CqGk~~~~~ 116 (160)
T PF12641_consen 75 ------TAGAGP--DSEYAKKILKNVEALLPKG--NEILG--TFMCQGKMDPKV 116 (160)
T ss_pred ------ecCCCC--chHHHHHHHHHHHHhhccC--Ceecc--eEEeCCcCCHHH
Confidence 122211 1222334444444444333 22223 588999987643
No 135
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=47.06 E-value=9.5 Score=31.90 Aligned_cols=87 Identities=23% Similarity=0.401 Sum_probs=51.7
Q ss_pred ccCCCHHHHHHHHHhCCCCCCceE--EEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCcccchhhhhccchHHHH
Q psy16875 63 DIHGQYTDLLRLFEYGGFPPDANY--LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECK 140 (324)
Q Consensus 63 DIHG~~~~L~~il~~~~~~~~~~~--vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~~~~~~~gf~~e~~ 140 (324)
|+.|++..|++.|+.+++|..-++ +-.|| +...+.++-.+-+.|+..|.-. .+...++....-.
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~-------p~afLpil~~~L~~yS~~va~~-------l~~~g~eL~~k~D 66 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGD-------PSAFLPILHYALLSYSTHVARL-------LVDRGYELYGKND 66 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCC-------HHHHHHHHHHHHHcCCHHHHHH-------HHHcCchhhcCCh
Confidence 899999999999999999854332 23454 2223333333333454333211 1122222333344
Q ss_pred HHhcHHHHHHHHHhhhcCCeEEE
Q psy16875 141 RRYNIKLWKTFTDCFNCLPIAAI 163 (324)
Q Consensus 141 ~~~~~~~~~~~~~~f~~LPla~~ 163 (324)
.+|-+.+|+-+.+.|.+-|....
T Consensus 67 ~RF~E~vyk~LRdef~YkP~lT~ 89 (131)
T PF15007_consen 67 LRFVESVYKLLRDEFNYKPSLTK 89 (131)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCH
Confidence 56677888889999998887644
No 136
>PLN02965 Probable pheophorbidase
Probab=38.67 E-value=99 Score=27.64 Aligned_cols=70 Identities=11% Similarity=0.039 Sum_probs=38.2
Q ss_pred EEEecCCCCCCcccHHHHHhhcCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCCceecC----HHHHHHHHHhCCC--c
Q psy16875 168 IFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFG----ADVVSKFLHNHDL--D 241 (324)
Q Consensus 168 il~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~rg~~~~fg----~~~~~~fl~~~~~--~ 241 (324)
++++||.......+..++..+.... ..-+ .+ +..|++.+.+.....++ .+.+.++++..+. +
T Consensus 6 vvllHG~~~~~~~w~~~~~~L~~~~---~~vi----a~-----Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~ 73 (255)
T PLN02965 6 FVFVHGASHGAWCWYKLATLLDAAG---FKST----CV-----DLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHK 73 (255)
T ss_pred EEEECCCCCCcCcHHHHHHHHhhCC---ceEE----Ee-----cCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCC
Confidence 7889997655555556666652110 0001 11 12334333221111222 3447899999875 7
Q ss_pred EEEEeecc
Q psy16875 242 LICRAHQV 249 (324)
Q Consensus 242 ~iIRgH~~ 249 (324)
.++-||..
T Consensus 74 ~~lvGhSm 81 (255)
T PLN02965 74 VILVGHSI 81 (255)
T ss_pred EEEEecCc
Confidence 99999997
No 137
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=38.52 E-value=98 Score=30.93 Aligned_cols=66 Identities=11% Similarity=0.029 Sum_probs=47.0
Q ss_pred CCEEEEeccCC-CHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhC-CCcEEEECC
Q psy16875 56 APLKICGDIHG-QYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKY-PENFFLLRG 122 (324)
Q Consensus 56 ~~i~vvGDIHG-~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~-p~~v~~LrG 122 (324)
..++||=|-|. +.+.++..|+.+...+..+++.+||+...|+.+.+.-.-+-.+.... .+.++++ |
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 45788999555 67888888877654344678889999999999998876665544433 3555544 5
No 138
>COG0148 Eno Enolase [Carbohydrate transport and metabolism]
Probab=29.35 E-value=4.5e+02 Score=26.30 Aligned_cols=123 Identities=21% Similarity=0.304 Sum_probs=77.9
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCC-------C---HHHHHHHHHhCCCCCCceEE----------
Q psy16875 28 QMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHG-------Q---YTDLLRLFEYGGFPPDANYL---------- 87 (324)
Q Consensus 28 ~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG-------~---~~~L~~il~~~~~~~~~~~v---------- 87 (324)
+...+.+.+.++...+++..-..++...+..+.|||==| + ++-|....+.+|+.+..++.
T Consensus 168 p~ga~sf~ealr~~~ev~h~lk~~l~~~g~~t~vGDEGgfAP~l~~~eeald~i~~Aie~agy~~g~~i~~alD~Aasef 247 (423)
T COG0148 168 PVGAESFKEALRAGAEVFHHLKKLLKEKGLSTGVGDEGGFAPNLKSNEEALDILVEAIEEAGYEPGEDIALALDVAASEF 247 (423)
T ss_pred ecChHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCcccCCCCCccHHHHHHHHHHHHHhCCCCCcceeeeehhhhhhh
Confidence 345788999999999999988888887777778999555 2 23334445667776542211
Q ss_pred E-eCcccCC--CCCcHHHHHHHHHhhhhCCCcEEEE-CCCcccchhhhhccchHHHHHHhcHHHHHHHHHhhhcCC-eEE
Q psy16875 88 F-LGDYVDR--GKQSLETICLLLAYKIKYPENFFLL-RGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP-IAA 162 (324)
Q Consensus 88 f-LGD~VDR--G~~s~evl~ll~~lk~~~p~~v~~L-rGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP-la~ 162 (324)
+ -|.|+-. .-.+-|.++++..|..+|| ++.+ -|= .+..|+.+...-+.+- -.-
T Consensus 248 y~~~~Y~~~~~~~~~~e~i~~~~~Lv~~Yp--ivsiEDpl--------------------~E~Dweg~~~lt~~~g~kvq 305 (423)
T COG0148 248 YKDGKYVLEGESLTSEELIEYYLELVKKYP--IVSIEDPL--------------------SEDDWEGFAELTKRLGDKVQ 305 (423)
T ss_pred ccCCeeeecCcccCHHHHHHHHHHHHHhCC--EEEEcCCC--------------------CchhHHHHHHHHHhhCCeEE
Confidence 1 1223333 3467788999999998998 5544 222 3345555555555553 344
Q ss_pred EEcCcEEEec
Q psy16875 163 IIDEKIFCCH 172 (324)
Q Consensus 163 ~i~~~il~vH 172 (324)
++++.+|+.-
T Consensus 306 ivGDDLfvTN 315 (423)
T COG0148 306 IVGDDLFVTN 315 (423)
T ss_pred EECCcceecC
Confidence 5677777655
No 139
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=28.92 E-value=2.2e+02 Score=22.43 Aligned_cols=45 Identities=16% Similarity=0.475 Sum_probs=31.0
Q ss_pred CHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEE
Q psy16875 67 QYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 120 (324)
Q Consensus 67 ~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~L 120 (324)
....+.++++. -|+.++|++||= |..-.|+..-+. .++|++|..+
T Consensus 51 K~~~i~~i~~~---fP~~kfiLIGDs---gq~DpeiY~~ia---~~~P~~i~ai 95 (100)
T PF09949_consen 51 KRDNIERILRD---FPERKFILIGDS---GQHDPEIYAEIA---RRFPGRILAI 95 (100)
T ss_pred HHHHHHHHHHH---CCCCcEEEEeeC---CCcCHHHHHHHH---HHCCCCEEEE
Confidence 34566666665 367889999984 666677776543 4689988654
No 140
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=27.24 E-value=1.6e+02 Score=27.38 Aligned_cols=60 Identities=22% Similarity=0.217 Sum_probs=32.0
Q ss_pred CCcEEEECCCcccchhhhhccchHHHHHHhcHHHHHHHHHhhhcCCeEEEEc-CcEEEecCCCCCC
Q psy16875 114 PENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIID-EKIFCCHGGLSPD 178 (324)
Q Consensus 114 p~~v~~LrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPla~~i~-~~il~vHgGi~p~ 178 (324)
..+|++|-||||.-. +..| ..-..... -.-..-...+..+|++-.-. .+|+-.|-||-.+
T Consensus 127 nknvvvlagnhein~-ngny---~arlanhk-ls~gDTYnlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 127 NKNVVVLAGNHEINF-NGNY---MARLANHK-LSAGDTYNLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred ccceEEEecCceecc-CchH---HHHHhhCC-CCccchhhccccccccccCcchhhhhcccCceec
Confidence 368999999999853 2222 11111100 00011124566777775522 3588889888643
No 141
>PF14164 YqzH: YqzH-like protein
Probab=25.95 E-value=2.4e+02 Score=20.62 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=32.8
Q ss_pred CHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCC
Q psy16875 7 NVDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPI 50 (324)
Q Consensus 7 ~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~a~~i~~~ep~ 50 (324)
-|+.+|.+.|.--+ ......+++++|...|+......-.++|.
T Consensus 5 ~I~Kmi~~~l~QYg-~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 5 LIEKMIINCLRQYG-YDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred HHHHHHHHHHHHhC-CcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 46777777775543 23355689999999999999999888875
No 142
>PF06490 FleQ: Flagellar regulatory protein FleQ; InterPro: IPR010518 This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators that are involved in regulation of flagellar motility e.g. FleQ in Pseudomonas aeruginosa. It is clearly related to IPR001789 from INTERPRO, but lacks the conserved aspartate residue that undergoes phosphorylation in the classic two-component system response regulator (IPR001789 from INTERPRO).
Probab=25.56 E-value=1.8e+02 Score=23.07 Aligned_cols=64 Identities=22% Similarity=0.213 Sum_probs=43.6
Q ss_pred CEEEEeccCCCHHHHHHHHHhCCCCC-----------------CceEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEE
Q psy16875 57 PLKICGDIHGQYTDLLRLFEYGGFPP-----------------DANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 119 (324)
Q Consensus 57 ~i~vvGDIHG~~~~L~~il~~~~~~~-----------------~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~ 119 (324)
+|.||.|=-....+|..+|+.+|... ....|.+|+.- .....+..+...+|.-=++
T Consensus 1 kILvIddd~~R~~~L~~ILeFlGe~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-------~~~~~l~~l~~~~~~~Pvl 73 (109)
T PF06490_consen 1 KILVIDDDAERRQRLSTILEFLGEQCEAVSSSDWSQADWSSPWEACAVILGSCS-------KLAELLKELLKWAPHIPVL 73 (109)
T ss_pred CEEEECCcHHHHHhhhhhhhhcCCCeEEecHHHHHHhhhhcCCcEEEEEecCch-------hHHHHHHHHHhhCCCCCEE
Confidence 46777777777778888888777543 11244556642 4556666666678877788
Q ss_pred ECCCcccc
Q psy16875 120 LRGNHECA 127 (324)
Q Consensus 120 LrGNHE~~ 127 (324)
+.|.++..
T Consensus 74 llg~~~~~ 81 (109)
T PF06490_consen 74 LLGEHDSP 81 (109)
T ss_pred EECCCCcc
Confidence 88998887
No 143
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=25.49 E-value=2.5e+02 Score=27.50 Aligned_cols=65 Identities=20% Similarity=0.196 Sum_probs=44.3
Q ss_pred CCEEEEeccC-CCHHHHHHHHHhCCCCCCceEEEeCcccCCCCCcHHHHHHHHHhhhhCC-CcEEEE
Q psy16875 56 APLKICGDIH-GQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYP-ENFFLL 120 (324)
Q Consensus 56 ~~i~vvGDIH-G~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p-~~v~~L 120 (324)
..+.||=|-+ .+.+.+..+|+.+...+...++.+|+...-|+.+.+.-..+-.....+. +.+++.
T Consensus 296 ~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi~~ 362 (417)
T TIGR01143 296 NGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFLV 362 (417)
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 4577888854 4889999888876533345677899998888888766655555443443 555554
No 144
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=25.33 E-value=99 Score=28.47 Aligned_cols=39 Identities=23% Similarity=0.410 Sum_probs=31.8
Q ss_pred CHHHHHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecC
Q psy16875 227 GADVVSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSA 268 (324)
Q Consensus 227 g~~~~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa 268 (324)
....+-+||+.+|.. .-+|.+.+||.|++++-+|+||--
T Consensus 139 ~~~~~~~fl~~lGy~---~~~Eyv~~G~~F~~g~i~I~l~ri 177 (250)
T PF09637_consen 139 TSGSLLSFLNELGYR---FDYEYVVEGYRFFKGDIVIELFRI 177 (250)
T ss_dssp SSSSHHHHHHHTTEE---EEEEEEEEEEEEEECCEEEEEEEE
T ss_pred CCCCHHHHHHHcCCc---eEEEEEEEEEEEEECCEEEEEEEE
Confidence 466788999999954 468999999999998888887653
No 145
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=24.01 E-value=60 Score=30.43 Aligned_cols=39 Identities=26% Similarity=0.453 Sum_probs=25.4
Q ss_pred eEEEeCcccCCCCCcHHHH-HHHHHhhhhCCCcEEEECCCcccc
Q psy16875 85 NYLFLGDYVDRGKQSLETI-CLLLAYKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 85 ~~vfLGD~VDRG~~s~evl-~ll~~lk~~~p~~v~~LrGNHE~~ 127 (324)
+++|+||+|.+ .+.+.+ ..|-.++.+++..+.+. |=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 58999999944 334433 55677787777665554 55554
No 146
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=22.70 E-value=1.4e+02 Score=26.84 Aligned_cols=30 Identities=13% Similarity=0.129 Sum_probs=25.9
Q ss_pred ecCHHHHHHHHHhCCCcEEEEeecccccCc
Q psy16875 225 TFGADVVSKFLHNHDLDLICRAHQVVDDGY 254 (324)
Q Consensus 225 ~fg~~~~~~fl~~~~~~~iIRgH~~~~~G~ 254 (324)
.+|...+.+++++.+++++|-||.-...+.
T Consensus 195 ~~~s~~l~~li~~~~v~~~i~GH~H~~~~~ 224 (239)
T TIGR03729 195 FLGSQHFGQLLVKYEIKDVIFGHLHRRFGP 224 (239)
T ss_pred ccChHHHHHHHHHhCCCEEEECCccCCCCC
Confidence 578889999999999999999999876543
No 147
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=21.43 E-value=4.3e+02 Score=25.86 Aligned_cols=84 Identities=17% Similarity=0.226 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccC--CCHHH-----HHHHHHhCCCCCCceEEEeCccc----C---C
Q psy16875 30 SEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIH--GQYTD-----LLRLFEYGGFPPDANYLFLGDYV----D---R 95 (324)
Q Consensus 30 ~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIH--G~~~~-----L~~il~~~~~~~~~~~vfLGD~V----D---R 95 (324)
+++.+...++... ..+ ..+++|+|+.- |+++. +.+++... ..+.+++.||-- + .
T Consensus 308 np~s~~~al~~l~----~~~-----~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~---~~d~vi~~g~~~~~~~~~~~~ 375 (417)
T TIGR01143 308 NPDSMRAALDALA----RFP-----GKKILVLGDMAELGEYSEELHAEVGRYANSL---GIDLVFLVGEEAAVIYDSLGC 375 (417)
T ss_pred CHHHHHHHHHHHH----hCC-----CCEEEEEcCchhcChHHHHHHHHHHHHHHHc---CCCEEEEECHHHHHHHHhccc
Confidence 3566665555443 222 35689999985 77776 44455432 236677888832 1 1
Q ss_pred -C---CCcHHHHHHHHHhhhhCCCcEEEECCCcccc
Q psy16875 96 -G---KQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (324)
Q Consensus 96 -G---~~s~evl~ll~~lk~~~p~~v~~LrGNHE~~ 127 (324)
. ++.-+++..+. +...|+.+++++|.+-..
T Consensus 376 ~~~~~~~~~~~~~~l~--~~~~~~d~VLlkGSr~~~ 409 (417)
T TIGR01143 376 KGFHFADKDELLAFLK--LELGEGDVVLVKGSRSVK 409 (417)
T ss_pred CcEEECCHHHHHHHHH--HhcCCCCEEEEEeCCcCc
Confidence 1 12223333333 224677789999877543
No 148
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=21.06 E-value=1.7e+02 Score=26.30 Aligned_cols=39 Identities=23% Similarity=0.382 Sum_probs=28.0
Q ss_pred HHHHHHhCCCcEEEEeecccccCceEEcCceEEEEecCCCC
Q psy16875 231 VSKFLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAPNY 271 (324)
Q Consensus 231 ~~~fl~~~~~~~iIRgH~~~~~G~~~~~~~~~itifSa~~y 271 (324)
+.+.|-..|+++||-||.-+..+++.. ++++| +||-=|+
T Consensus 197 ~A~~l~~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNf 235 (239)
T smart00854 197 LAHALIDAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNF 235 (239)
T ss_pred HHHHHHHcCCCEEEcCCCCcCCceEEE-CCEEE-EEccccc
Confidence 334444479999999999998899876 45555 5776554
No 149
>COG0770 MurF UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]
Probab=20.71 E-value=4.2e+02 Score=26.78 Aligned_cols=94 Identities=14% Similarity=0.154 Sum_probs=58.8
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEec-cCCCHHHHHHHHHhCCCCCCce-EEEeCcccCCCCCcHHHHHHH
Q psy16875 29 MSEAEVRGLCLKSREIFLQQPILLELEAPLKICGD-IHGQYTDLLRLFEYGGFPPDAN-YLFLGDYVDRGKQSLETICLL 106 (324)
Q Consensus 29 ~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGD-IHG~~~~L~~il~~~~~~~~~~-~vfLGD~VDRG~~s~evl~ll 106 (324)
++.+++..-+.....+-.+.. .......+.+|=| ..++.+.+...++.....+..+ ++.|||+..-|.+|.++-.-+
T Consensus 300 ~~~e~i~~~L~~~~~~~gR~~-~~~~~~g~~iIdD~YNAnp~sm~aai~~l~~~~~~~~i~VlGdM~ELG~~s~~~H~~v 378 (451)
T COG0770 300 LDLEEIAAGLKELKPVKGRLE-VILLANGKTLIDDSYNANPDSMRAALDLLAALPGRKGIAVLGDMLELGEESEELHEEV 378 (451)
T ss_pred CCHHHHHHHHHhcCCCCccce-eEecCCCcEEEEcCCCCCHHHHHHHHHHHhhCccCCcEEEeCChhhhCccHHHHHHHH
Confidence 455555554443332221111 1222334445555 6789999999888876655555 788999999999999987777
Q ss_pred HHhhhhCCCcEEEECCC
Q psy16875 107 LAYKIKYPENFFLLRGN 123 (324)
Q Consensus 107 ~~lk~~~p~~v~~LrGN 123 (324)
-.......-...++-|.
T Consensus 379 ~~~~~~~~~d~v~~~G~ 395 (451)
T COG0770 379 GEYAVEAGIDLVFLVGE 395 (451)
T ss_pred HHHHHhcCceEEEEEcc
Confidence 66655443345666676
No 150
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=20.51 E-value=6e+02 Score=22.42 Aligned_cols=79 Identities=19% Similarity=0.201 Sum_probs=56.3
Q ss_pred ccccCCHHHHHHHHHHHHHHHhhCCCeeeecCCEEEEeccCCCHHHHHHHHHhCCCCC----------------------
Q psy16875 25 KTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPP---------------------- 82 (324)
Q Consensus 25 ~~~~~~~~~i~~l~~~a~~i~~~ep~ll~~~~~i~vvGDIHG~~~~L~~il~~~~~~~---------------------- 82 (324)
..+.++++++.+=+.+..+.+.++-.= ...++||=++|.+--+-.++..+.++.
T Consensus 8 ~evLisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i 83 (178)
T COG0634 8 KEVLISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKI 83 (178)
T ss_pred ceEeeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEE
Confidence 456789999998888887777665432 567889999999887777776654321
Q ss_pred ---------CceEEEeCcccCCCCCcHHHHHHHH
Q psy16875 83 ---------DANYLFLGDYVDRGKQSLETICLLL 107 (324)
Q Consensus 83 ---------~~~~vfLGD~VDRG~~s~evl~ll~ 107 (324)
..+++.+=|++|-|--=-.+.++|.
T Consensus 84 ~kDld~di~grdVLiVeDIiDsG~TLs~i~~~l~ 117 (178)
T COG0634 84 LKDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLK 117 (178)
T ss_pred ecccccCCCCCeEEEEecccccChhHHHHHHHHH
Confidence 2357889999998865555555443
No 151
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=20.39 E-value=92 Score=28.93 Aligned_cols=39 Identities=28% Similarity=0.393 Sum_probs=26.2
Q ss_pred eEEEeCcccCCCCCcHHHHHHHHHhhhhCCCcEEEECCCccc
Q psy16875 85 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 126 (324)
Q Consensus 85 ~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~~LrGNHE~ 126 (324)
+++|+||+|.+.-.. -+-..|-.++.+++..+.+. |=|.
T Consensus 1 ~ilfigdi~g~~G~~-~~~~~l~~lk~~~~~D~vi~--NgEn 39 (255)
T cd07382 1 KILFIGDIVGKPGRK-AVKEHLPKLKKEYKIDFVIA--NGEN 39 (255)
T ss_pred CEEEEEeCCCHHHHH-HHHHHHHHHHHHCCCCEEEE--CCcc
Confidence 478999999864332 34566778888887666555 4444
Done!