RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16875
(324 letters)
>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo
sapiens), beta isoform [TaxId: 9606]}
Length = 294
Score = 409 bits (1052), Expect = e-145
Identities = 268/294 (91%), Positives = 281/294 (95%)
Query: 5 ELNVDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDI 64
+LN+D +IQRLLE RG +PGK VQ+ E E+RGLCLKSREIFL QPILLELEAPLKICGDI
Sbjct: 1 KLNIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDI 60
Query: 65 HGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 124
HGQY DLLRLFEYGGFPP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH
Sbjct: 61 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 120
Query: 125 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQMMEQ 184
ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAI+DEKIFCCHGGLSPDLQ MEQ
Sbjct: 121 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQ 180
Query: 185 IRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLIC 244
IRRIMRPTDVPD GLLCDLLWSDPDKDV GWGENDRGVSFTFGA+VV+KFLH HDLDLIC
Sbjct: 181 IRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLIC 240
Query: 245 RAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPS 298
RAHQVV+DGYEFFAKRQLVTLFSAPNYCGEFDNAG MMSVDETLMCSFQILKP+
Sbjct: 241 RAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 294
>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic
subunit alpha isoform, PP2A-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 288
Score = 355 bits (911), Expect = e-124
Identities = 139/296 (46%), Positives = 194/296 (65%), Gaps = 10/296 (3%)
Query: 4 FELNVDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGD 63
F +D I++L E + Q+SE++V+ LC K++EI ++ + E+ P+ +CGD
Sbjct: 1 FTKELDQWIEQLNECK--------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGD 52
Query: 64 IHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN 123
+HGQ+ DL+ LF GG PD NYLF+GDYVDRG S+ET+ LL+A K++Y E +LRGN
Sbjct: 53 VHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGN 112
Query: 124 HECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQMM 182
HE I ++YGFYDEC R+Y N +WK FTD F+ LP+ A++D +IFC HGGLSP + +
Sbjct: 113 HESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTL 172
Query: 183 EQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDL 242
+ IR + R +VP G +CDLLWSDPD GWG + RG +TFG D+ F H + L L
Sbjct: 173 DHIRALDRLQEVPHEGPMCDLLWSDPDDR-GGWGISPRGAGYTFGQDISETFNHANGLTL 231
Query: 243 ICRAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPS 298
+ RAHQ+V +GY + R +VT+FSAPNYC N +M +D+TL SF P+
Sbjct: 232 VSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPA 287
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A
subunit) {Human (Homo sapiens) [TaxId: 9606]}
Length = 473
Score = 360 bits (926), Expect = e-123
Identities = 114/300 (38%), Positives = 174/300 (58%), Gaps = 21/300 (7%)
Query: 7 NVDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLELEAPLKICGDIHG 66
VD L L+ K ++ E+ + + I Q+ LL+++AP+ +CGDIHG
Sbjct: 29 RVDILKAHLM--------KEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHG 80
Query: 67 QYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 126
Q+ DL++LFE GG P + YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC
Sbjct: 81 QFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHEC 140
Query: 127 ASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQMMEQIR 186
+ + F ECK +Y+ +++ D F+CLP+AA+++++ C HGGLSP++ ++ IR
Sbjct: 141 RHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIR 200
Query: 187 RIMRPTDVPDTGLLCDLLWSDPDKDVQGWGEND-------RGVSFTFGADVVSKFLHNHD 239
++ R + P G +CD+LWSDP +D + RG S+ + V +FL +++
Sbjct: 201 KLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNN 260
Query: 240 LDLICRAHQVVDDGYEFFAKRQ------LVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQ 293
L I RAH+ D GY + K Q L+T+FSAPNY ++N ++ + +M Q
Sbjct: 261 LLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQ 320
>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5
{Human (Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 333 bits (854), Expect = e-115
Identities = 110/298 (36%), Positives = 164/298 (55%), Gaps = 16/298 (5%)
Query: 8 VDYLIQRLLEARGCRPGKTVQMSEAEVRGLCLKSREIFLQQPILLEL----EAPLKICGD 63
+ L+Q + + ++ + ++ +E+ + L+E + +CGD
Sbjct: 16 MKELMQWYKDQK--------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGD 67
Query: 64 IHGQYTDLLRLFEYGGFPPDAN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 122
HGQ+ DLL +FE G P + N Y+F GD+VDRG S+E I L +K+ YP++F LLRG
Sbjct: 68 THGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRG 127
Query: 123 NHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGL-SPDLQM 181
NHE ++N+IYGF E K +Y ++++ F++ F LP+A I+ K+ HGGL S D
Sbjct: 128 NHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVT 187
Query: 182 MEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLD 241
++ IR+I R PD+G +CDLLWSDP G + RGVS FG DV FL ++LD
Sbjct: 188 LDDIRKIERNRQPPDSGPMCDLLWSDPQPQ-NGRSISKRGVSCQFGPDVTKAFLEENNLD 246
Query: 242 LICRAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVD-ETLMCSFQILKPS 298
I R+H+V +GYE + VT+FSAPNYC + N + + L F
Sbjct: 247 YIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAV 304
>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase
{Bacteriophage lambda [TaxId: 10710]}
Length = 219
Score = 74.9 bits (183), Expect = 2e-16
Identities = 45/210 (21%), Positives = 74/210 (35%), Gaps = 39/210 (18%)
Query: 60 ICGDIHGQYTDLLRLFEYGGFPPDAN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFF 118
+ GD+HG YT+L+ + GF + + +GD VDRG +++E + L F
Sbjct: 17 VVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLEL------ITFPWFR 70
Query: 119 LLRGNHECASINRIYGFYDECKRRYNIKLW------------KTFTDCFNCLPIA---AI 163
+RGNHE I+ + + N W K + LP+
Sbjct: 71 AVRGNHEQMMIDGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVS 130
Query: 164 IDEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVS 223
D+K CH D +P D + + + + V+ D
Sbjct: 131 KDKKYVICHADYPFDEY------EFGKPVDHQQVIWNRERISNSQNGIVKEIKGADT--- 181
Query: 224 FTFGADVVSKFLHNHDLDLICRAHQVVDDG 253
F FG H + + A+Q+ D
Sbjct: 182 FIFG--------HTPAVKPLKFANQMYIDT 203
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 251
Score = 62.8 bits (151), Expect = 5e-12
Identities = 27/199 (13%), Positives = 49/199 (24%), Gaps = 31/199 (15%)
Query: 60 ICGDIHGQYTDLLRLFEY-----GGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYP 114
+ +I G L Y LG+ V E I ++ +
Sbjct: 5 VLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVI--KDLTKK 62
Query: 115 ENFFLLRGNHECASINRIYGFYDECKRRYNIKL-----------------WKTFTDCFNC 157
EN ++RG ++ D + +
Sbjct: 63 ENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPI 122
Query: 158 LPIAAIIDEKIFCCHG-------GLSPDLQMMEQIRRIMRPTDVPDTGLLCDLLWSDPDK 210
+ I ++F +G G Q IMRP + ++ ++
Sbjct: 123 YLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM 182
Query: 211 DVQGWGENDRGVSFTFGAD 229
G V F G +
Sbjct: 183 TRYGRVVCPGSVGFPPGKE 201
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 48.8 bits (115), Expect = 1e-07
Identities = 19/137 (13%), Positives = 39/137 (28%), Gaps = 8/137 (5%)
Query: 60 ICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICL----LLAYKIKYPE 115
DIHG R+ E + LGD ++ G ++ ++ +
Sbjct: 6 FASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAH 65
Query: 116 NFFLLRGNHECASINRIYGFYDECKRRYNIKLWK----TFTDCFNCLPIAAIIDEKIFCC 171
+RGN + + F + + + T F + A+ +
Sbjct: 66 KVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPENLPALNQNDVLVY 125
Query: 172 HGGLSPDLQMMEQIRRI 188
P + +I
Sbjct: 126 GHTHLPVAEQRGEIFHF 142
>d2q07a3 d.17.6.5 (A:394-459) Uncharacterized protein AF0587
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 66
Score = 25.7 bits (56), Expect = 2.0
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 112 KYPENFFLLRGNHECASINRIYGFYD 137
+YPE LL G A ++RIYG D
Sbjct: 28 RYPE-LELLEGKKRLARVDRIYGMLD 52
>d1ryp1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 222
Score = 26.3 bits (57), Expect = 5.0
Identities = 3/28 (10%), Positives = 8/28 (28%)
Query: 164 IDEKIFCCHGGLSPDLQMMEQIRRIMRP 191
+ I G + D + + +
Sbjct: 46 CGDNIVMSANGFAADGDALVKRFKNSVK 73
>d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 293
Score = 26.2 bits (57), Expect = 5.1
Identities = 6/32 (18%), Positives = 13/32 (40%)
Query: 53 ELEAPLKICGDIHGQYTDLLRLFEYGGFPPDA 84
++ A ++ G + L + + G P A
Sbjct: 227 KIVAKIRKAGLNEDSFRPYLEIAKAGKLKPSA 258
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId:
2261]}
Length = 333
Score = 26.2 bits (56), Expect = 5.8
Identities = 19/164 (11%), Positives = 41/164 (25%), Gaps = 5/164 (3%)
Query: 87 LFLGDYVDRGKQSLETICLLLAYKIKYPEN---FFLLRGNHECASINRIYGFYDECKRRY 143
L GD + S T+ +A E+ F + GNH+ R + +
Sbjct: 45 LIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHDRTQ--RGPSVLNLLEDFG 102
Query: 144 NIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDLQMMEQIRRIMRPTDVPDTGLLCDL 203
+ + + + + G+ DL++ + L
Sbjct: 103 LVYVIGMRKEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEILKRLF 162
Query: 204 LWSDPDKDVQGWGENDRGVSFTFGADVVSKFLHNHDLDLICRAH 247
+D + G + + + H
Sbjct: 163 RPTDNAILMLHQGVREVSEARGEDYFEIGLGDLPEGYLYYALGH 206
>d1rypk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 198
Score = 25.9 bits (56), Expect = 6.1
Identities = 2/24 (8%), Positives = 6/24 (25%)
Query: 164 IDEKIFCCHGGLSPDLQMMEQIRR 187
+ G + D + +
Sbjct: 38 LSPHTLMSFAGEAGDTVQFAEYIQ 61
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936
{Methanococcus jannaschii [TaxId: 2190]}
Length = 165
Score = 25.6 bits (55), Expect = 6.2
Identities = 20/123 (16%), Positives = 32/123 (26%), Gaps = 20/123 (16%)
Query: 60 ICGDIHGQYTDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 119
I D H ++ + E + GD+V + N
Sbjct: 5 IMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSLFV---------IKEFENLNANIIA 55
Query: 120 LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFCCHGGLSPDL 179
GN++ + +I D + I D K F HG L
Sbjct: 56 TYGNNDGE-------RCKLKEWLKDINEENIIDDFISVE----IDDLKFFITHGHHQSVL 104
Query: 180 QMM 182
+M
Sbjct: 105 EMA 107
>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium
yoelii yoelii [TaxId: 73239]}
Length = 404
Score = 25.9 bits (56), Expect = 8.2
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 160 IAAIIDEKIFCCHGGLSPDLQMMEQIRRIMRPTDV 194
+ A I E I G + P ++ + I + +V
Sbjct: 187 VCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNV 221
>d1evsa_ a.26.1.1 (A:) Oncostatin M {Human (Homo sapiens) [TaxId:
9606]}
Length = 184
Score = 25.0 bits (54), Expect = 9.8
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 1/84 (1%)
Query: 234 FLHNHDLDLICRAHQVVDDGYEFFAKRQLVTLFSAPNYCGEFDNAG-GMMSVDETLMCSF 292
FL + L C H++ D + L + A ++ + + C
Sbjct: 67 FLQTLNATLGCVLHRLADLEQRLPKAQDLERSGLNIEDLEKLQMARPNILGLRNNIYCMA 126
Query: 293 QILKPSEKKAKYQYTGNSSRPSTP 316
Q+L S+ + +S+P TP
Sbjct: 127 QLLDNSDTAEPTKAGRGASQPPTP 150
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.142 0.452
Gapped
Lambda K H
0.267 0.0556 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,308,146
Number of extensions: 63299
Number of successful extensions: 151
Number of sequences better than 10.0: 1
Number of HSP's gapped: 140
Number of HSP's successfully gapped: 19
Length of query: 324
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 239
Effective length of database: 1,240,546
Effective search space: 296490494
Effective search space used: 296490494
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (24.6 bits)