Query psy16878
Match_columns 213
No_of_seqs 192 out of 1119
Neff 7.8
Searched_HMMs 29240
Date Sat Aug 17 00:25:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16878.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16878hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qij_A Protein 4.1; cytoskelet 100.0 3.1E-39 1.1E-43 276.7 13.9 150 63-213 85-238 (296)
2 1ef1_A Moesin; membrane, FERM 100.0 2.2E-37 7.4E-42 264.4 15.8 151 62-213 69-232 (294)
3 1h4r_A Merlin; FERM, neurofibr 100.0 4.3E-37 1.5E-41 265.0 16.5 149 63-212 90-251 (314)
4 2i1j_A Moesin; FERM, coiled-co 100.0 4E-35 1.4E-39 270.8 16.0 151 62-213 72-235 (575)
5 1mix_A Talin; focal adhesion, 100.0 1.3E-34 4.4E-39 235.1 12.0 139 72-212 1-152 (206)
6 4f7g_A Talin-1; alpha-helix bu 100.0 1.4E-33 4.9E-38 232.2 12.8 148 61-212 8-163 (222)
7 4dxa_B KREV interaction trappe 100.0 1.9E-33 6.5E-38 243.3 8.4 145 66-211 90-261 (322)
8 3ivf_A Talin-1; FERM domain, c 100.0 4.4E-32 1.5E-36 238.7 15.8 147 64-212 158-317 (371)
9 3au4_A Myosin-X; protein-prote 100.0 9.4E-29 3.2E-33 227.8 16.1 145 63-211 296-485 (555)
10 3pvl_A Myosin VIIA isoform 1; 100.0 5.4E-29 1.9E-33 232.8 10.4 147 63-212 345-513 (655)
11 2al6_A Focal adhesion kinase 1 99.9 4.4E-28 1.5E-32 213.7 8.8 146 64-210 88-257 (375)
12 4eku_A Protein-tyrosine kinase 99.9 2.8E-22 9.6E-27 177.4 12.1 147 65-211 109-277 (392)
13 2j0j_A Focal adhesion kinase 1 99.8 2.1E-19 7.1E-24 168.3 9.1 146 63-208 87-255 (656)
14 3qij_A Protein 4.1; cytoskelet 98.3 2.6E-07 8.8E-12 78.5 2.2 48 1-49 136-183 (296)
15 1ef1_A Moesin; membrane, FERM 98.0 2E-06 7E-11 72.5 3.2 48 1-49 122-177 (294)
16 1h4r_A Merlin; FERM, neurofibr 98.0 2.8E-06 9.7E-11 72.3 3.1 48 1-49 142-197 (314)
17 4f7g_A Talin-1; alpha-helix bu 98.0 2.6E-06 8.8E-11 69.2 2.3 48 1-49 55-104 (222)
18 1mix_A Talin; focal adhesion, 97.8 8.2E-06 2.8E-10 65.1 2.6 47 1-49 44-93 (206)
19 1hbk_A ACBP, acyl-COA binding 97.7 0.00028 9.5E-09 49.2 8.5 68 100-180 20-88 (89)
20 2cb8_A Acyl-COA-binding protei 97.6 0.00038 1.3E-08 48.3 8.9 80 88-180 6-86 (87)
21 3epy_A Acyl-COA-binding domain 97.6 0.00043 1.5E-08 48.3 8.8 80 88-180 8-88 (89)
22 2i1j_A Moesin; FERM, coiled-co 97.6 2.7E-05 9.4E-10 71.8 3.3 48 1-49 125-180 (575)
23 1st7_A ACBP, acyl-COA-binding 97.6 0.00038 1.3E-08 48.2 7.8 75 89-176 6-80 (86)
24 3ivf_A Talin-1; FERM domain, c 97.5 6.1E-05 2.1E-09 65.5 3.5 47 1-49 209-258 (371)
25 2cop_A Acyl-coenzyme A binding 97.4 0.00057 2E-08 49.4 7.8 80 89-181 13-93 (109)
26 4dxa_B KREV interaction trappe 97.4 2.6E-05 8.9E-10 66.7 0.8 47 1-48 140-194 (322)
27 2wh5_A Acyl-COA-binding domain 97.4 0.00083 2.8E-08 48.3 7.8 67 97-176 25-91 (106)
28 2lbb_A Acyl COA binding protei 97.2 0.00033 1.1E-08 49.5 4.5 68 100-180 27-95 (96)
29 3flv_A Acyl-COA-binding domain 97.2 0.0013 4.5E-08 48.1 7.8 66 98-176 42-107 (119)
30 3fp5_A Acyl-COA binding protei 97.1 0.0018 6.2E-08 46.5 7.7 66 98-176 22-87 (106)
31 2cqu_A Peroxisomal D3,D2-enoyl 97.0 0.0016 5.5E-08 47.5 6.5 66 102-180 34-100 (116)
32 2al6_A Focal adhesion kinase 1 94.0 0.0049 1.7E-07 53.6 -1.9 49 1-49 141-202 (375)
33 3pvl_A Myosin VIIA isoform 1; 93.9 0.0054 1.9E-07 57.3 -1.8 45 1-48 397-448 (655)
34 3au4_A Myosin-X; protein-prote 92.4 0.07 2.4E-06 48.5 3.2 16 1-16 347-362 (555)
35 2j0j_A Focal adhesion kinase 1 66.5 1 3.5E-05 41.6 -0.4 49 1-49 141-202 (656)
36 4eku_A Protein-tyrosine kinase 58.7 3.4 0.00012 35.9 1.5 49 1-49 161-222 (392)
37 1ntv_A Disabled homolog 1; bet 26.4 46 0.0016 24.4 3.0 23 189-211 58-80 (152)
38 3so6_A LDL receptor adaptor pr 25.7 52 0.0018 23.3 3.1 23 189-211 41-63 (137)
39 1p3r_A Disabled homolog 2; PTB 24.2 54 0.0018 24.3 3.0 22 190-211 58-79 (160)
40 4dx8_A Integrin beta-1-binding 20.4 2.1E+02 0.0073 21.3 5.5 42 164-211 40-81 (154)
No 1
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=100.00 E-value=3.1e-39 Score=276.71 Aligned_cols=150 Identities=41% Similarity=0.729 Sum_probs=140.5
Q ss_pred cceeEEeEEeccCC-CCCch---hHHHHHHHHHHhhcccceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCccccccc
Q psy16878 63 GLLLTLGYKVKHRP-RPPKI---PHRYLFCLQIKRDLSQGLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKF 138 (213)
Q Consensus 63 g~~~~l~frvkf~p-~~~~l---~~r~l~~lQ~~~di~~g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~ 138 (213)
+.++++.||||||| +|..+ ++|++||+|+|+||++|+++|+.++|+.||||++|+++|||+++.+ ..+|++...+
T Consensus 85 ~~~~~l~frvkfy~~~~~~l~~~~tr~l~ylQ~~~dil~G~~~c~~e~a~~LAAl~~Qae~Gd~~~~~~-~~~yl~~~~~ 163 (296)
T 3qij_A 85 GVPWNFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTIQSELGDYDPELH-GVDYVSDFKL 163 (296)
T ss_dssp --CCEEEEEESSCCSCGGGSSCHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHCSCCHHHH-TTCCCTTSCC
T ss_pred CCCcEEEEEEEEeCCCchhccCHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHhcCCCCcccc-chhhCcHhhc
Confidence 34789999999976 66655 9999999999999999999999999999999999999999998876 5789998999
Q ss_pred ccCCchHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCcCCCCeeeeccCCCCCeEEEEEeCCccEEEcCCcccC
Q psy16878 139 VPNQTPELERRIMENHKKHAGQSPAAADLNLLETARRCELYGVKLHPAKDHDNILLNLSVAHMGILVFQNQTKIN 213 (213)
Q Consensus 139 ~P~~~~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l~~YG~~~f~vkd~~~~~~~lgv~~~Gi~v~~~~~k~~ 213 (213)
+|.+.++|+++|.+.|++++|||+.+|+..||+.|++||+||+++|+|+++.|.+++||||.+||.||++++||+
T Consensus 164 ~P~~~~~~~~~I~~~h~~~~g~s~~eA~~~yL~~a~~l~~yG~~~f~vk~~~~~~~~LgV~~~Gi~v~~~~~kl~ 238 (296)
T 3qij_A 164 APNQTKELEEKVMELHKSYRSMTPAQADLEFLENAKKLSMYGVDLHKAKDLEGVDIILGVCSSGLLVYKDKLRIN 238 (296)
T ss_dssp SSSCCHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHTTSTTTTCEEEEEECTTSCEEEEEECSSEEEEEETTEEEE
T ss_pred CCcCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHhcccccCceEEEEEcCCCCEEEEEECCCeEEEEeCCCeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998864
No 2
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=100.00 E-value=2.2e-37 Score=264.37 Aligned_cols=151 Identities=28% Similarity=0.471 Sum_probs=139.7
Q ss_pred ccceeEEeEEeccCCC-CC-ch---hHHHHHHHHHHhhcccceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCccccc
Q psy16878 62 DGLLLTLGYKVKHRPR-PP-KI---PHRYLFCLQIKRDLSQGLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSY 136 (213)
Q Consensus 62 ~g~~~~l~frvkf~p~-~~-~l---~~r~l~~lQ~~~di~~g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~ 136 (213)
.+.++++.||++|||. +. .+ .+|++||+|+|+||++|+++|+.++|++||||++|+++|||+++.| ..+|++..
T Consensus 69 ~~~~~~l~fr~kf~~~~~~~~l~~~~~~~l~y~Q~~~dil~g~~~~~~e~a~~Laal~~q~~~Gd~~~~~~-~~~~l~~~ 147 (294)
T 1ef1_A 69 KESPLLFKFRAKFYPEDVSEELIQDITQRLFFLQVKEGILNDDIYCPPETAVLLASYAVQSKYGDFNKEVH-KSGYLAGD 147 (294)
T ss_dssp CCSSEEEEEEESSCCSCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTS-CTTTTTTC
T ss_pred CCCCEEEEEEEEEECCChHHhhccHHHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHHHhCCCCcccc-Chhhcccc
Confidence 3457899999999775 43 34 8999999999999999999999999999999999999999999887 58899889
Q ss_pred ccccCC--------chHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCcCCCCeeeeccCCCCCeEEEEEeCCccEEEcC
Q psy16878 137 KFVPNQ--------TPELERRIMENHKKHAGQSPAAADLNLLETARRCELYGVKLHPAKDHDNILLNLSVAHMGILVFQN 208 (213)
Q Consensus 137 ~~~P~~--------~~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l~~YG~~~f~vkd~~~~~~~lgv~~~Gi~v~~~ 208 (213)
+|+|++ .++|+++|.+.|++++|||+.+|+..||+.|++||+||+++|+|+++.|.+++|||+++||.||+.
T Consensus 148 ~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g~s~~~A~~~yL~~~~~lp~yG~~~f~v~~~~g~~~~Lgv~~~Gi~v~~~ 227 (294)
T 1ef1_A 148 KLLPQRVLEQHKLNKDQWEERIQVWHEEHRGMLREDAVLEYLKIAQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYEQ 227 (294)
T ss_dssp CCSCHHHHHHBCCCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTTSTTTTCEEEEEECTTCCEEEEEEETTEEEEEET
T ss_pred ccCCHHHHhhcCCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHcccCccCceEEeeecCCCCEEEEEEecCcEEEEeC
Confidence 999985 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccC
Q psy16878 209 QTKIN 213 (213)
Q Consensus 209 ~~k~~ 213 (213)
++|+|
T Consensus 228 ~~k~~ 232 (294)
T 1ef1_A 228 NDRLT 232 (294)
T ss_dssp TCSSS
T ss_pred CCccc
Confidence 98864
No 3
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=100.00 E-value=4.3e-37 Score=265.03 Aligned_cols=149 Identities=25% Similarity=0.462 Sum_probs=138.9
Q ss_pred cceeEEeEEeccCCCCC--ch---hHHHHHHHHHHhhcccceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCcccccc
Q psy16878 63 GLLLTLGYKVKHRPRPP--KI---PHRYLFCLQIKRDLSQGLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYK 137 (213)
Q Consensus 63 g~~~~l~frvkf~p~~~--~l---~~r~l~~lQ~~~di~~g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~ 137 (213)
+.++++.||+||||.+. .+ .+|++||+|+|+||++|+++|+.++|++||||++|+++|||+++.| ..+|++...
T Consensus 90 ~~~~~l~fr~kf~~~~~~~~l~~~~~~~l~y~Q~~~dil~g~~~~~~e~a~~Laal~~Qa~~Gd~~~~~~-~~~~~~~~~ 168 (314)
T 1h4r_A 90 EEPVTFHFLAKFYPENAEEELVQEITQHLFFLQVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVH-KRGFLAQEE 168 (314)
T ss_dssp SSSEEEEEEESSCCSSHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTS-CTTTTTTCC
T ss_pred CCCEEEEEEEEEecCCchhhhcCHHHHHHHHHHHHHHHhCCCccCCHHHHHHHHHHHHHHHHCCCCcccc-chhhcchhh
Confidence 45789999999987654 34 9999999999999999999999999999999999999999999887 578998899
Q ss_pred cccCC--------chHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCcCCCCeeeeccCCCCCeEEEEEeCCccEEEcCC
Q psy16878 138 FVPNQ--------TPELERRIMENHKKHAGQSPAAADLNLLETARRCELYGVKLHPAKDHDNILLNLSVAHMGILVFQNQ 209 (213)
Q Consensus 138 ~~P~~--------~~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l~~YG~~~f~vkd~~~~~~~lgv~~~Gi~v~~~~ 209 (213)
|+|.+ .++|+++|.+.|++++|||+.+|+.+||+.|++||+||+++|+|+|+.|.+++|||+++||.||+.+
T Consensus 169 ~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~lp~yG~~~f~v~~~~g~~~~LgI~~~Gi~v~~~~ 248 (314)
T 1h4r_A 169 LLPKRVINLYQMTPEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALGLHIYDPE 248 (314)
T ss_dssp CSCHHHHTTSCCCHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTSTTTTCEEEEEEETTCCEEEEEECSSEEEEECTT
T ss_pred cCCHHHHhhccCCHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhccCccCceEEEeecCCCCEEEEEEeCCceEEEeCC
Confidence 99986 3689999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccc
Q psy16878 210 TKI 212 (213)
Q Consensus 210 ~k~ 212 (213)
+|+
T Consensus 249 ~k~ 251 (314)
T 1h4r_A 249 NRL 251 (314)
T ss_dssp CSS
T ss_pred CCc
Confidence 875
No 4
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=100.00 E-value=4e-35 Score=270.76 Aligned_cols=151 Identities=26% Similarity=0.423 Sum_probs=139.7
Q ss_pred ccceeEEeEEeccCCC-CC-ch---hHHHHHHHHHHhhcccceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCccccc
Q psy16878 62 DGLLLTLGYKVKHRPR-PP-KI---PHRYLFCLQIKRDLSQGLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSY 136 (213)
Q Consensus 62 ~g~~~~l~frvkf~p~-~~-~l---~~r~l~~lQ~~~di~~g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~ 136 (213)
.+.+|+++|||+|||. +. .+ +++++||+|+++||++|++||+.++|+.||||++|+++|||+++.| ..+|+...
T Consensus 72 ~~~~~~L~FRvkfy~~~~~~~l~d~~t~~LlYlQvk~dIl~G~l~c~~e~a~~LAAL~lQae~GDy~~~~~-~~~yl~~~ 150 (575)
T 2i1j_A 72 KENPLQFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQARHGDHNPAVH-GPGFLAND 150 (575)
T ss_dssp CCSSEEEEEEESSCCSSHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTC-CTTTTTTC
T ss_pred CCCCeEEEEEEEEcCCChhhhcCCHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHhcCCChhhc-cccccccc
Confidence 3567999999999775 44 34 9999999999999999999999999999999999999999999887 58999889
Q ss_pred ccccCC--------chHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCcCCCCeeeeccCCCCCeEEEEEeCCccEEEcC
Q psy16878 137 KFVPNQ--------TPELERRIMENHKKHAGQSPAAADLNLLETARRCELYGVKLHPAKDHDNILLNLSVAHMGILVFQN 208 (213)
Q Consensus 137 ~~~P~~--------~~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l~~YG~~~f~vkd~~~~~~~lgv~~~Gi~v~~~ 208 (213)
.|+|.+ .+.|++.|...|++++|||+.+|+..||+.|++||+||+++|+|+|+.|.++|||||++||.||+.
T Consensus 151 ~~lP~~vl~~~~~s~e~~~~~I~~~hk~l~G~s~~eA~~~yL~~a~~lp~YG~~~F~vkd~~g~~l~LGV~~~GI~v~~~ 230 (575)
T 2i1j_A 151 RLLPQRVTDQHKMSREEWEQSITNWWQEHRGMLREDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEK 230 (575)
T ss_dssp CCSCHHHHHTBCCCHHHHHHHHHHHHGGGTTCCHHHHHHHHHHHHTTSTTTTCEEEEEECTTCCEEEEEECSSEEEEEET
T ss_pred ccCCHHHHhhcCCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhccccCCEEEEEEecCCCEEEEEEcCCeeEEEeC
Confidence 999985 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccC
Q psy16878 209 QTKIN 213 (213)
Q Consensus 209 ~~k~~ 213 (213)
++|+|
T Consensus 231 ~~k~~ 235 (575)
T 2i1j_A 231 DDKLT 235 (575)
T ss_dssp TCSSS
T ss_pred CCCcc
Confidence 98854
No 5
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=100.00 E-value=1.3e-34 Score=235.12 Aligned_cols=139 Identities=21% Similarity=0.266 Sum_probs=125.9
Q ss_pred eccCC-CCCc-h---hHHHHHHHHHHhhcccceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCcccccccccCCc---
Q psy16878 72 VKHRP-RPPK-I---PHRYLFCLQIKRDLSQGLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQT--- 143 (213)
Q Consensus 72 vkf~p-~~~~-l---~~r~l~~lQ~~~di~~g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~~P~~~--- 143 (213)
||||| ++.. + .+|+++|+|+|+||++|+++|+.++|++||||++|+++|||+++.| .++|++..+|+|++.
T Consensus 1 vkf~~~d~~~~~~d~~~~~l~y~Q~~~dil~g~~~~~~~~a~~Laal~~qa~~Gd~~~~~~-~~~~~~~~~~lP~~~~~~ 79 (206)
T 1mix_A 1 MKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGYQCQIQFGPHNEQKH-KPGFLELKDFLPKEYIKQ 79 (206)
T ss_dssp CCCCCCHHHHHTSCHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTS-CTTCSCGGGTSCGGGSTT
T ss_pred CcccCCCCCCCcCCHHHHHHHHHHHHHHHHCCccccCHHHHHHHHHHhhhheecCCCcccc-cCCccchHhhCCHHHhhc
Confidence 68855 5643 2 9999999999999999999999999999999999999999999877 578999899999863
Q ss_pred hHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCcCCCCeeeeccCCC-C----CeEEEEEeCCccEEEcCCccc
Q psy16878 144 PELERRIMENHKKHAGQSPAAADLNLLETARRCELYGVKLHPAKDHD-N----ILLNLSVAHMGILVFQNQTKI 212 (213)
Q Consensus 144 ~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l~~YG~~~f~vkd~~-~----~~~~lgv~~~Gi~v~~~~~k~ 212 (213)
.. +++|.+.|++++|||+.+|+..||+.|++||+||+++|+|++.. | .+++|||+++||.+++.++|.
T Consensus 80 ~~-~~~i~~~~~~~~g~s~~~A~~~yL~~~~~l~~yG~~~f~v~~~~~g~~~~~~~~Lgi~~~Gi~~~~~~~~~ 152 (206)
T 1mix_A 80 KG-ERKIFMAHKNCGNMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKE 152 (206)
T ss_dssp CC-HHHHHHHHHHTTTCCHHHHHHHHHHHHHHSTTTTCEEEEEEECCSSCSSCEEEEEEECSSEEEEEETTTCC
T ss_pred cc-HHHHHHHHHHccCCCHHHHHHHHHHHHHhCcccCceEEEEEEccCCCCCcCcEEEEEcccceEEeCCCCCc
Confidence 23 89999999999999999999999999999999999999998764 4 799999999999999998874
No 6
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=100.00 E-value=1.4e-33 Score=232.17 Aligned_cols=148 Identities=22% Similarity=0.295 Sum_probs=121.0
Q ss_pred ccccee-EEeEEeccCCCCCchhHHHHHHHHHHhhcccceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCcccccccc
Q psy16878 61 SDGLLL-TLGYKVKHRPRPPKIPHRYLFCLQIKRDLSQGLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKFV 139 (213)
Q Consensus 61 ~~g~~~-~l~frvkf~p~~~~l~~r~l~~lQ~~~di~~g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~~ 139 (213)
++|+.+ +-.|--+|.++|. ++++||+|+|+||++|+++|+.++|+.||||++|+++|||+++.+ ..+|+....|+
T Consensus 8 ~~~~~~~~~~~~~~~~~Dp~---~l~l~ylQ~~~dil~G~~~~~~e~a~~LAal~~Qae~Gd~~~~~~-~~~~~~l~~~l 83 (222)
T 4f7g_A 8 SSGVDLGTENLYFQSSRDPV---QLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKH-KAGFLDLKDFL 83 (222)
T ss_dssp ------------------CC---HHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTS-CSSCSCGGGTS
T ss_pred ccccccccCceeccCCCCHH---HHHHHHHHHHHHHhCCcccCCHHHHHHHHHHHHHHHHCCCCchhc-ccCccchhhcc
Confidence 345433 2333444455666 779999999999999999999999999999999999999999887 47888888999
Q ss_pred cCC--chHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCcCCCCeeeeccCCC-----CCeEEEEEeCCccEEEcCCccc
Q psy16878 140 PNQ--TPELERRIMENHKKHAGQSPAAADLNLLETARRCELYGVKLHPAKDHD-----NILLNLSVAHMGILVFQNQTKI 212 (213)
Q Consensus 140 P~~--~~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l~~YG~~~f~vkd~~-----~~~~~lgv~~~Gi~v~~~~~k~ 212 (213)
|++ ...++++|.+.|++++|+|+.+|+..||+.|++||+||+++|.|+++. +.+++||||++||.|++.++|.
T Consensus 84 P~~~~~~~~~~~I~~~h~~~~g~s~~eA~~~yL~~~~~l~~yG~~~f~v~~~~~g~~~~~~~~LgI~~~GI~v~~~~tk~ 163 (222)
T 4f7g_A 84 PKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKE 163 (222)
T ss_dssp CGGGGGGCCHHHHHHHHHTTTTCCHHHHHHHHHHHHHTSTTTTCEEEEEEEECTTSSCEEEEEEEECSSEEEEECTTTCC
T ss_pred CHHHHhhhhHHHHHHHHHhccCCCHHHHHHHHHHHHhhccccCcEEEEEEEecCCCCCCCCEEEEEcCCcEEEEcCCCCc
Confidence 998 456789999999999999999999999999999999999999998754 3589999999999999998874
No 7
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=100.00 E-value=1.9e-33 Score=243.27 Aligned_cols=145 Identities=20% Similarity=0.279 Sum_probs=124.4
Q ss_pred eEEeEEecc-CCCCC--ch---hHHHHHHHHHHhhcccceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCccc---cc
Q psy16878 66 LTLGYKVKH-RPRPP--KI---PHRYLFCLQIKRDLSQGLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLS---SY 136 (213)
Q Consensus 66 ~~l~frvkf-~p~~~--~l---~~r~l~~lQ~~~di~~g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~---~~ 136 (213)
.++.||+++ +|+.. .+ .+|+++|+|+++||++|+++|+.++|+.||||++|+++|||+++.| ..+|++ ..
T Consensus 90 p~l~~rr~~f~~~~~~~~~~d~~t~~l~y~Q~~~dil~G~~~c~~e~a~~LAAl~~q~e~Gd~~~~~~-~~~~l~~~~l~ 168 (322)
T 4dxa_B 90 PQLFLRRDVRLPLEVEKQIEDPLAILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGNYESKKH-KQGFLNEENLK 168 (322)
T ss_dssp CEEEEEECTTCCHHHHTTCCCHHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHCSCCHHHH-SSSCSCHHHHT
T ss_pred eEEEEEEeecccccccccccCHHHHHHHHHHHHHHHHCCcccCCHHHHHHHHHHHHHHHhCCCCcccc-cccccchhhhh
Confidence 377777776 77422 23 9999999999999999999999999999999999999999998776 467876 35
Q ss_pred ccccCC-----chHHHHHHHHHHHhh---cCCCH--HHHHHHHHHHHhcCcCCCCeeeeccC--------CCCCeEEEEE
Q psy16878 137 KFVPNQ-----TPELERRIMENHKKH---AGQSP--AAADLNLLETARRCELYGVKLHPAKD--------HDNILLNLSV 198 (213)
Q Consensus 137 ~~~P~~-----~~~~~~~i~~~h~~l---~G~s~--~~A~~~fL~~a~~l~~YG~~~f~vkd--------~~~~~~~lgv 198 (213)
.|+|.+ .++|+++|.+.|+++ +|||+ ++|+..||+.|++||+||+++|.|+. ..+.+++|||
T Consensus 169 ~~lP~~~~~~~~~~~~~~I~~~h~~~~~~~g~s~~~a~a~~~yL~~~~~lp~yG~~~f~v~~~~~~~g~~~~~~~~~LgV 248 (322)
T 4dxa_B 169 SIVPVTKLKSKAPHWTNRILHEYKNLSTSEGVSKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVIPVYVGV 248 (322)
T ss_dssp TTSCTTTTTTTGGGSHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHTSTTTTCEEEEEEEECC-------EEEEEEEE
T ss_pred hhCCHHHHhcCHHHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHhcCCCcCeEEEEEEEeccCCCCccCCCeEEEEE
Confidence 799987 357999999999999 99986 45799999999999999999999983 2346999999
Q ss_pred eCCccEEEcCCcc
Q psy16878 199 AHMGILVFQNQTK 211 (213)
Q Consensus 199 ~~~Gi~v~~~~~k 211 (213)
|.+||.||+.++|
T Consensus 249 ~~~Gv~v~~~~tk 261 (322)
T 4dxa_B 249 NIKGLHLLNMETK 261 (322)
T ss_dssp CSSEEEEEETTTC
T ss_pred ccCceEEEcCCCc
Confidence 9999999999887
No 8
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=99.98 E-value=4.4e-32 Score=238.75 Aligned_cols=147 Identities=20% Similarity=0.242 Sum_probs=130.8
Q ss_pred ceeEEeEEeccCCC-CCc-h---hHHHHHHHHHHhhcccceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCccccccc
Q psy16878 64 LLLTLGYKVKHRPR-PPK-I---PHRYLFCLQIKRDLSQGLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKF 138 (213)
Q Consensus 64 ~~~~l~frvkf~p~-~~~-l---~~r~l~~lQ~~~di~~g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~ 138 (213)
.++++.||+||||. +.. + .++++||+|+|+||++|+++|+.++|+.||||++|+++|||+++.+ ..+|+....|
T Consensus 158 ~~~~l~frvKf~~~d~~~~~~D~~~~~l~y~Q~~~dil~G~~~c~~e~a~~LAAl~~qae~Gd~~~~~~-~~~~~~l~~~ 236 (371)
T 3ivf_A 158 EHETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKH-KAGFLDLKDF 236 (371)
T ss_dssp TTCEEEEEECCCCBCSSCBTTCHHHHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHHCSCCTTTS-CTTCSCGGGT
T ss_pred CCceEEEEEEEecCCccccCCCHHHHHHHHHHhhHHHhCceeecCHHHHHHHHHHHHHHHhCCCChhhc-ccchhccccc
Confidence 35789999999664 333 2 8999999999999999999999999999999999999999998877 4788888899
Q ss_pred ccCC---chHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCcCCCCeeeeccCCC-C----CeEEEEEeCCccEEEcCCc
Q psy16878 139 VPNQ---TPELERRIMENHKKHAGQSPAAADLNLLETARRCELYGVKLHPAKDHD-N----ILLNLSVAHMGILVFQNQT 210 (213)
Q Consensus 139 ~P~~---~~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l~~YG~~~f~vkd~~-~----~~~~lgv~~~Gi~v~~~~~ 210 (213)
+|.+ ... +++|.+.|++++|+|+.+|+..||+.|++||+||+++|+|+++. | .+++||||++||.+++.++
T Consensus 237 lP~~~~~~~~-e~~I~~~~~~~~g~s~~eA~~~yL~~~~~l~~yG~~~f~vk~~~~g~~~~~~~~LgI~~~GI~v~~~~~ 315 (371)
T 3ivf_A 237 LPKEYVKQKG-ERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKT 315 (371)
T ss_dssp SCGGGTTSCH-HHHHHHHHHHTTTCCHHHHHHHHHHHHHHSTTTTCEEEEEEEECTTSSCEEEEEEEECSSEEEEEETTT
T ss_pred CCHHHhCchH-HHHHHHHHHHccCCCHHHHHHHHHHHHhcccccCcEEEEEEEeccCCCCCccEEEEEcCCcEEEEcCCC
Confidence 9986 234 88999999999999999999999999999999999999997542 2 4799999999999999988
Q ss_pred cc
Q psy16878 211 KI 212 (213)
Q Consensus 211 k~ 212 (213)
|.
T Consensus 316 k~ 317 (371)
T 3ivf_A 316 KE 317 (371)
T ss_dssp CC
T ss_pred Cc
Confidence 74
No 9
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=99.96 E-value=9.4e-29 Score=227.79 Aligned_cols=145 Identities=15% Similarity=0.134 Sum_probs=126.2
Q ss_pred cceeEEeEEeccCCCCCch----hHHHHHHHHHHhhcccceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCccccccc
Q psy16878 63 GLLLTLGYKVKHRPRPPKI----PHRYLFCLQIKRDLSQGLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKF 138 (213)
Q Consensus 63 g~~~~l~frvkf~p~~~~l----~~r~l~~lQ~~~di~~g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~ 138 (213)
+.++++.||++||+++..+ ++++++|+|+++||++|+++|+.++++.||||++|+++|||++... . .....|
T Consensus 296 ~~~~~l~fR~~ff~~~~~~~~d~~~~~lly~Q~~~dil~G~~~~~~e~a~~LAAl~lQ~~~GD~~~~~~-~---~~l~~~ 371 (555)
T 3au4_A 296 DLPWKFYFKLYCFLDTDNVPKDSVEFAFMFEQAHEAVIHGHHPAPEENLQVLAALRLQYLQGDYTLHAA-I---PPLEEV 371 (555)
T ss_dssp CCCCEEEEEEEECSCCTTCCTTSHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHCSCCTTCC-C---CCGGGT
T ss_pred CCceEEEEEEEeecCcccCCcchHHHHhhHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHcCCCccccc-h---hhhhhh
Confidence 3478999999998877643 7999999999999999999999999999999999999999987543 1 122467
Q ss_pred ccCC------------------------------c--------hHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCcCCC
Q psy16878 139 VPNQ------------------------------T--------PELERRIMENHKKHAGQSPAAADLNLLETARRCELYG 180 (213)
Q Consensus 139 ~P~~------------------------------~--------~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l~~YG 180 (213)
+|.. . ..++++|.+.|++++|||+.+|+..||+.|++||+||
T Consensus 372 lP~~~l~~~~~~~~k~~s~~~~~l~~~~~~~~~~~~~W~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~lp~yG 451 (555)
T 3au4_A 372 YSLQRLKARISQSTKTFSFRTGSVVRQKVEEEQMLDMWIKEEVSSARASIIDKWRKFQGMNQEQAMAKYMALIKEWPGYG 451 (555)
T ss_dssp SCCHHHHHHHHHTTCCEECCTTSCCEECCCCHHHHHHHTHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTSTTTT
T ss_pred CCHHHhhhhhccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCcC
Confidence 7763 1 2348889999999999999999999999999999999
Q ss_pred CeeeeccCCCC---CeEEEEEeCCccEEEcCCcc
Q psy16878 181 VKLHPAKDHDN---ILLNLSVAHMGILVFQNQTK 211 (213)
Q Consensus 181 ~~~f~vkd~~~---~~~~lgv~~~Gi~v~~~~~k 211 (213)
+++|+|+++.| .+++|||+.+||.++++++|
T Consensus 452 ~~~F~v~~~~~~~~~~l~LgV~~~GI~v~~~~~k 485 (555)
T 3au4_A 452 STLFDVECKEGGFPQELWLGVSADAVSVYKRGEG 485 (555)
T ss_dssp CEEEEEEEEESSSCSEEEEEECSSEEEEEETTCS
T ss_pred ceEEEEEecCCCCCceEEEEEcccceEEECCCCC
Confidence 99999987655 79999999999999999886
No 10
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=99.95 E-value=5.4e-29 Score=232.84 Aligned_cols=147 Identities=14% Similarity=0.141 Sum_probs=125.9
Q ss_pred cceeEEeEEeccCC-CCCch---hHHHHHHHHHHhhcccceeecCHH-HHHHHHHHHHHHHhCCCCCCCCCCCCcccccc
Q psy16878 63 GLLLTLGYKVKHRP-RPPKI---PHRYLFCLQIKRDLSQGLLHCNEN-TAALMASYIVQAECGDYVSEDYPDHTYLSSYK 137 (213)
Q Consensus 63 g~~~~l~frvkf~p-~~~~l---~~r~l~~lQ~~~di~~g~l~~~~~-~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~ 137 (213)
+.++++.||++||+ ++..+ ++++++|+|+++||++|+++|+.+ +++.||||++|+++|||++..+ .... ...
T Consensus 345 ~~~~~L~FRvkff~p~~~~~~d~it~~LlYlQ~k~dIl~Grlpc~~E~~a~~LAAl~~Qae~Gd~~~~~~-~~~~--L~~ 421 (655)
T 3pvl_A 345 NAPWRLFFRKEVFTPWHNPSEDNVATNLIYQQVVRGVKFGEYRCEKEDDLAELASQQYFVDYGSEMILER-LLSL--VPT 421 (655)
T ss_dssp GCCCEEEEEECCCCTTCCGGGCHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHTTCCCHHH-HHHH--HHH
T ss_pred CCCeEEEEEEEEecCCcccccCHHHHHHHHHHHhcccccCccCCChHHHHHHHHHHHHHHHhCCCcchhh-HHHH--HHH
Confidence 45789999999965 34333 899999999999999999999855 9999999999999999975432 1112 235
Q ss_pred cccCC-------chHHHHHHHHHHHhh----cCCCHHHHHHHHHHHH-hcCcCCCCeeeeccCCCC-----CeEEEEEeC
Q psy16878 138 FVPNQ-------TPELERRIMENHKKH----AGQSPAAADLNLLETA-RRCELYGVKLHPAKDHDN-----ILLNLSVAH 200 (213)
Q Consensus 138 ~~P~~-------~~~~~~~i~~~h~~l----~G~s~~~A~~~fL~~a-~~l~~YG~~~f~vkd~~~-----~~~~lgv~~ 200 (213)
|+|.+ .++|+++|.+.|+++ +|+|+.+|+..||+.| ++||+||+++|+|++..| .+++||||.
T Consensus 422 ~lP~~~l~~~~~~~~w~~~I~~~hkk~~~~~~g~s~~eAk~~yL~~a~~~lp~YG~~fF~vk~~~g~~lp~~~l~LgVn~ 501 (655)
T 3pvl_A 422 YIPDREITPLKNLEKWAQLAIAAHKKGIYAQRRTDSQKVKEDVVNYARFKWPLLFSRFYEAYKFSGPPLPKSDVIVAVNW 501 (655)
T ss_dssp HSCGGGCCSSSCHHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHCTTTSCEEEEEEEEESSCCSCSEEEEEEET
T ss_pred hCCHHHHhccCCHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhccccCcEEEEEEecCCCCCCCccEEEEEcC
Confidence 77764 468999999999999 9999999999999999 899999999999998665 689999999
Q ss_pred CccEEEcCCccc
Q psy16878 201 MGILVFQNQTKI 212 (213)
Q Consensus 201 ~Gi~v~~~~~k~ 212 (213)
+||.||+.++|+
T Consensus 502 ~GV~v~d~~~k~ 513 (655)
T 3pvl_A 502 TGVYFVDEQEQV 513 (655)
T ss_dssp TEEEEECTTCCE
T ss_pred CceEEEcCCCce
Confidence 999999999873
No 11
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=99.95 E-value=4.4e-28 Score=213.72 Aligned_cols=146 Identities=13% Similarity=0.202 Sum_probs=123.0
Q ss_pred ceeEEeEEeccCCCC-Cch-----hHHHHHHHHHHhhcccce-eecCHHHHHHHHHHHHHHHhCCCCCCCCC---CCCcc
Q psy16878 64 LLLTLGYKVKHRPRP-PKI-----PHRYLFCLQIKRDLSQGL-LHCNENTAALMASYIVQAECGDYVSEDYP---DHTYL 133 (213)
Q Consensus 64 ~~~~l~frvkf~p~~-~~l-----~~r~l~~lQ~~~di~~g~-l~~~~~~a~~Laal~lQa~~Gd~~~~~~~---~~~~l 133 (213)
.++++.|||+|||.. ..+ .++++||+|+|+|+++|+ ++|+.++|+.||||++|+++|||++..+. ..+++
T Consensus 88 ~~~~l~fRvrF~~~~~~~l~~~D~~t~~~~y~Q~r~Dil~g~~~~~~~e~al~LAaL~~q~~~gD~~~~~~~~k~~~~~l 167 (375)
T 2al6_A 88 EEWKYELRIRYLPKGFLNQFTEDKPTLNFFYQQVKNDYMLEIADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVL 167 (375)
T ss_dssp GGEEEEEEECCCCTTHHHHHTTCHHHHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHH
T ss_pred CceEEEEEEEEecCCHHHhhhcCHHHHHHHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHHHhhhccchhhcccCCHHHh
Confidence 368999999998764 322 799999999999999999 78999999999999999999999754221 12333
Q ss_pred c----ccccccCCc------hHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCcCCCCeeeeccCCCC----CeEEEEEe
Q psy16878 134 S----SYKFVPNQT------PELERRIMENHKKHAGQSPAAADLNLLETARRCELYGVKLHPAKDHDN----ILLNLSVA 199 (213)
Q Consensus 134 ~----~~~~~P~~~------~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l~~YG~~~f~vkd~~~----~~~~lgv~ 199 (213)
. ...|+|... .+|.++|.+.|++++|+|+.+|+.+||+.+++||+||+++|.|++..+ ..++||++
T Consensus 168 ~k~~~l~~flP~~~~~~~~~~~~~k~I~~~~k~~~g~s~~eAk~~yL~~~~~l~~yG~~~F~v~~~~~~~~~~~l~lg~~ 247 (375)
T 2al6_A 168 EKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILKFFEILSPVYRFDKECFKCALGSSWIISVELAIGPE 247 (375)
T ss_dssp HHTTCGGGTSCHHHHHSSCHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTTCCCSCEEEEEEECSSSCEEEEEEEETT
T ss_pred hhcccHHHhCCHHHHHHhChHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHhhcccCCcEEEEEeecCCCCcceEEEEecC
Confidence 3 348999863 589999999999999999999999999999999999999999987654 67888886
Q ss_pred CCccEEEcCCc
Q psy16878 200 HMGILVFQNQT 210 (213)
Q Consensus 200 ~~Gi~v~~~~~ 210 (213)
. ||.++.+++
T Consensus 248 ~-GI~~~~~~~ 257 (375)
T 2al6_A 248 E-GISYLTDKG 257 (375)
T ss_dssp T-EEEEESSTT
T ss_pred C-CEEEEeCCC
Confidence 4 999997754
No 12
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=99.87 E-value=2.8e-22 Score=177.41 Aligned_cols=147 Identities=14% Similarity=0.157 Sum_probs=121.1
Q ss_pred eeEEeEEeccCCCC-Cch-----hHHHHHHHHHHhhcccce-eecCHHHHHHHHHHHHHHHhCCCCCCCCC---CCCc--
Q psy16878 65 LLTLGYKVKHRPRP-PKI-----PHRYLFCLQIKRDLSQGL-LHCNENTAALMASYIVQAECGDYVSEDYP---DHTY-- 132 (213)
Q Consensus 65 ~~~l~frvkf~p~~-~~l-----~~r~l~~lQ~~~di~~g~-l~~~~~~a~~Laal~lQa~~Gd~~~~~~~---~~~~-- 132 (213)
.|++.|||||+|.. ..+ .+.+++|+|+|+|+++|. ++|+.++|+.||||.+|+++||++..... ..++
T Consensus 109 ~~~~~fRvrF~p~d~~~l~~~D~~~~~ylY~Q~r~D~l~g~~~~~~~e~al~LAaL~~q~~~gd~~~~a~~~k~~~~~l~ 188 (392)
T 4eku_A 109 EWRYDLQIRYLPEDFMESLKEDRTTLLYFYQQLRNDYMQRYASKVSEGMALQLGCLELRRFFKDMPHNALDKKSNFELLE 188 (392)
T ss_dssp GEEEEEEECSCCTTTHHHHTTCHHHHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHH
T ss_pred ceEEEEEEEEEcCCHHHhhhcChHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhhcchhhhccCCCHHHHh
Confidence 58999999998864 343 566789999999999998 78999999999999999999999753211 1122
Q ss_pred --ccccccccCC------chHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCcCCCCeeeeccCCC--CCeEEEEEeCCc
Q psy16878 133 --LSSYKFVPNQ------TPELERRIMENHKKHAGQSPAAADLNLLETARRCELYGVKLHPAKDHD--NILLNLSVAHMG 202 (213)
Q Consensus 133 --l~~~~~~P~~------~~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l~~YG~~~f~vkd~~--~~~~~lgv~~~G 202 (213)
+....|+|+. ..+|..+|...|+++.|+|+.+|+..||+.+++||+||+++|.|+... +.++.|.|+++|
T Consensus 189 k~~~lk~flP~~l~~~ik~k~~rk~I~~~~kk~~~ls~~eakl~YL~~l~~Lp~yG~e~F~vk~~s~~~~~~~L~Vg~~G 268 (392)
T 4eku_A 189 KEVGLDLFFPKQMQENLKPKQFRKMIQQTFQQYASLREEECVMKFFNTLAGFANIDQETYRCELIQGWNITVDLVIGPKG 268 (392)
T ss_dssp HHTCGGGTSCHHHHHHSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTSSCCSCEEEEEEEESSSCCCEEEEEETTE
T ss_pred hhccHHHhcCHHHHhhcCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhccCcEEEEEEeccCCcceeEEEEcCCc
Confidence 2245789984 357999999999999999999999999999999999999999998633 356777777789
Q ss_pred cEEEcCCcc
Q psy16878 203 ILVFQNQTK 211 (213)
Q Consensus 203 i~v~~~~~k 211 (213)
|.+...++|
T Consensus 269 Is~~~~k~~ 277 (392)
T 4eku_A 269 IRQLTSQDA 277 (392)
T ss_dssp EEEECSSCS
T ss_pred EEEECCCCC
Confidence 999877665
No 13
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.78 E-value=2.1e-19 Score=168.33 Aligned_cols=146 Identities=12% Similarity=0.208 Sum_probs=120.3
Q ss_pred cceeEEeEEeccCCC-CCch-----hHHHHHHHHHHhhcccceee-cCHHHHHHHHHHHHHHHhCCCCCCCCC---CCCc
Q psy16878 63 GLLLTLGYKVKHRPR-PPKI-----PHRYLFCLQIKRDLSQGLLH-CNENTAALMASYIVQAECGDYVSEDYP---DHTY 132 (213)
Q Consensus 63 g~~~~l~frvkf~p~-~~~l-----~~r~l~~lQ~~~di~~g~l~-~~~~~a~~Laal~lQa~~Gd~~~~~~~---~~~~ 132 (213)
..+|++.|||||||. +..| .++++||+|+|.|+++|+++ |+.++|+.||+|.+|+++||++..... ..++
T Consensus 87 ~~~~~~~~rvrf~p~~~~~l~~~d~~~~~ylf~Q~r~D~~~~~~~~~~~~~al~La~l~~~~~~~d~~~~a~~~~~~~~~ 166 (656)
T 2j0j_A 87 PEEWKYELRIRYLPKGFLNQFTEDKPTLNFFYQQVKNDYMLEIADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEV 166 (656)
T ss_dssp TTSEEEEEEECCCCTTHHHHHHTCHHHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHH
T ss_pred CcceEEEEEEEEcCCCHHHHHhccHHHHHHHHHHHHHHHHhcccccccHhHHHHHHHHHHHHHhhhccchhhhcCCCHHH
Confidence 357999999999776 5544 68999999999999999996 899999999999999999999644110 0112
Q ss_pred ----ccccccccC------CchHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcCcCCCCeeeeccCCCCCe--EEEEEeC
Q psy16878 133 ----LSSYKFVPN------QTPELERRIMENHKKHAGQSPAAADLNLLETARRCELYGVKLHPAKDHDNIL--LNLSVAH 200 (213)
Q Consensus 133 ----l~~~~~~P~------~~~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l~~YG~~~f~vkd~~~~~--~~lgv~~ 200 (213)
+....|+|+ +...+.++|.+.|+++.|+++.+|+.+||+.++.+++||++.|+|++..|.. +-|.|++
T Consensus 167 ~~k~~~~~~fiP~~~~~~~~~~~~~k~i~~~~k~~~~~~~~~~~lk~l~~l~~~~~yg~e~f~~~~~~g~~~~~~l~vg~ 246 (656)
T 2j0j_A 167 LEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILKFFEILSPVYRFDKECFKCALGSSWIISVELAIGP 246 (656)
T ss_dssp HHHTTTGGGTSCHHHHHHSCHHHHHHHHHHHHGGGTTCCHHHHHHHHHHHHGGGCCTTSEEEEEEEESSSEEEEEEEEET
T ss_pred HHhhccHHHhCCHHHHHHhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccCceEEeeccCCCCcccEEEEECC
Confidence 223579995 3467899999999999999999999999999999999999999999877743 6666667
Q ss_pred C-ccEEEcC
Q psy16878 201 M-GILVFQN 208 (213)
Q Consensus 201 ~-Gi~v~~~ 208 (213)
+ ||....+
T Consensus 247 ~~GI~~~~~ 255 (656)
T 2j0j_A 247 EEGISYLTD 255 (656)
T ss_dssp TTEEEECCS
T ss_pred CCCeEEECC
Confidence 6 9986654
No 14
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=98.26 E-value=2.6e-07 Score=78.47 Aligned_cols=48 Identities=46% Similarity=0.704 Sum_probs=44.4
Q ss_pred ChhhhhhhhhcCCCCCCCCCCCccccCCCCCCCcHHHHHHHHHHhhhhh
Q psy16878 1 MASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQTPELERRIMENHKKHA 49 (213)
Q Consensus 1 l~s~~~q~e~GD~~~~~~~~~~yl~~~~~~p~q~~~le~ki~~~hk~~~ 49 (213)
||||++|+|+|||+++.+ .++|+....++|.+.++++++|.+.|++++
T Consensus 136 LAAl~~Qae~Gd~~~~~~-~~~yl~~~~~~P~~~~~~~~~I~~~h~~~~ 183 (296)
T 3qij_A 136 LGSYTIQSELGDYDPELH-GVDYVSDFKLAPNQTKELEEKVMELHKSYR 183 (296)
T ss_dssp HHHHHHHHHHCSCCHHHH-TTCCCTTSCCSSSCCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhcCCCCcccc-chhhCcHhhcCCcCHHHHHHHHHHHHHHcc
Confidence 699999999999997765 578999999999999999999999999986
No 15
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=98.04 E-value=2e-06 Score=72.45 Aligned_cols=48 Identities=35% Similarity=0.570 Sum_probs=43.1
Q ss_pred ChhhhhhhhhcCCCCCCCCCCCccccCCCCCCC--------cHHHHHHHHHHhhhhh
Q psy16878 1 MASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQ--------TPELERRIMENHKKHA 49 (213)
Q Consensus 1 l~s~~~q~e~GD~~~~~~~~~~yl~~~~~~p~q--------~~~le~ki~~~hk~~~ 49 (213)
||||++|+|+|||+++.+ .++|+...+++|.+ .++|+++|.+.|++++
T Consensus 122 Laal~~q~~~Gd~~~~~~-~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~ 177 (294)
T 1ef1_A 122 LASYAVQSKYGDFNKEVH-KSGYLAGDKLLPQRVLEQHKLNKDQWEERIQVWHEEHR 177 (294)
T ss_dssp HHHHHHHHHHCSCCTTTS-CTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCcccc-ChhhccccccCCHHHHhhcCCCHHHHHHHHHHHHHHcc
Confidence 699999999999998876 57899999999985 4689999999999987
No 16
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=97.98 E-value=2.8e-06 Score=72.31 Aligned_cols=48 Identities=31% Similarity=0.468 Sum_probs=42.9
Q ss_pred ChhhhhhhhhcCCCCCCCCCCCccccCCCCCCC--------cHHHHHHHHHHhhhhh
Q psy16878 1 MASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQ--------TPELERRIMENHKKHA 49 (213)
Q Consensus 1 l~s~~~q~e~GD~~~~~~~~~~yl~~~~~~p~q--------~~~le~ki~~~hk~~~ 49 (213)
||||++|+|+|||++..+ .++|++..+++|.+ .++|+++|.+.|+++.
T Consensus 142 Laal~~Qa~~Gd~~~~~~-~~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~ 197 (314)
T 1h4r_A 142 LASYAVQAKYGDYDPSVH-KRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHR 197 (314)
T ss_dssp HHHHHHHHHHCSCCTTTS-CTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHCCCCcccc-chhhcchhhcCCHHHHhhccCCHHHHHHHHHHHHHHcC
Confidence 699999999999998876 57899999999985 3689999999999886
No 17
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=97.96 E-value=2.6e-06 Score=69.19 Aligned_cols=48 Identities=23% Similarity=0.414 Sum_probs=42.2
Q ss_pred ChhhhhhhhhcCCCCCCCCCCCccccCCCCCCC--cHHHHHHHHHHhhhhh
Q psy16878 1 MASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQ--TPELERRIMENHKKHA 49 (213)
Q Consensus 1 l~s~~~q~e~GD~~~~~~~~~~yl~~~~~~p~q--~~~le~ki~~~hk~~~ 49 (213)
||||++|+|+|||++..+ ..+|+...+++|.+ +..++++|.+.|++++
T Consensus 55 LAal~~Qae~Gd~~~~~~-~~~~~~l~~~lP~~~~~~~~~~~I~~~h~~~~ 104 (222)
T 4f7g_A 55 FAGFQCQIQFGPHNEQKH-KAGFLDLKDFLPKEYVKQKGERKIFQAHKNCG 104 (222)
T ss_dssp HHHHHHHHHHCSCCTTTS-CSSCSCGGGTSCGGGGGGCCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHCCCCchhc-ccCccchhhccCHHHHhhhhHHHHHHHHHhcc
Confidence 699999999999998876 46899999999987 5567899999999886
No 18
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=97.79 E-value=8.2e-06 Score=65.06 Aligned_cols=47 Identities=26% Similarity=0.411 Sum_probs=40.7
Q ss_pred ChhhhhhhhhcCCCCCCCCCCCccccCCCCCCCc---HHHHHHHHHHhhhhh
Q psy16878 1 MASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQT---PELERRIMENHKKHA 49 (213)
Q Consensus 1 l~s~~~q~e~GD~~~~~~~~~~yl~~~~~~p~q~---~~le~ki~~~hk~~~ 49 (213)
||||++|+|+|||+++.+ .++|++..+++|.+. .+ +++|.+.|++++
T Consensus 44 Laal~~qa~~Gd~~~~~~-~~~~~~~~~~lP~~~~~~~~-~~~i~~~~~~~~ 93 (206)
T 1mix_A 44 FAGYQCQIQFGPHNEQKH-KPGFLELKDFLPKEYIKQKG-ERKIFMAHKNCG 93 (206)
T ss_dssp HHHHHHHHHHCSCCTTTS-CTTCSCGGGTSCGGGSTTCC-HHHHHHHHHHTT
T ss_pred HHHHhhhheecCCCcccc-cCCccchHhhCCHHHhhccc-HHHHHHHHHHcc
Confidence 699999999999998866 578999999999862 33 899999999986
No 19
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=97.66 E-value=0.00028 Score=49.24 Aligned_cols=68 Identities=10% Similarity=0.127 Sum_probs=52.0
Q ss_pred eecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhc-CcC
Q psy16878 100 LHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQTPELERRIMENHKKHAGQSPAAADLNLLETARR-CEL 178 (213)
Q Consensus 100 l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~~P~~~~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~-l~~ 178 (213)
-..+.++-+.|=||--||..||++.... +.+. -..+.=-+.|+++.|||+.+|+..|++.+.+ .|.
T Consensus 20 ~~~~~~~~L~LYalyKQAt~Gd~~~~~P---g~~d----------~~~~aKw~AW~~l~gms~eeA~~~YI~~v~~l~~~ 86 (89)
T 1hbk_A 20 INLPNELKLDLYKYYKQSTIGNCNIKEP---SAHK----------YIDRKKYEAWKSVENLNREDAQKRYVDIVSEIFPY 86 (89)
T ss_dssp CCCCHHHHHHHHHHHHHHHTCSCCSCCC---CTTS----------HHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHCTT
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCCCC---CccC----------HHhHHHHHHHHHhcCCCHHHHHHHHHHHHHHHccc
Confidence 4578999999999999999999975432 2221 1223335689999999999999999999866 445
Q ss_pred CC
Q psy16878 179 YG 180 (213)
Q Consensus 179 YG 180 (213)
||
T Consensus 87 ~~ 88 (89)
T 1hbk_A 87 WQ 88 (89)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 20
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=97.64 E-value=0.00038 Score=48.31 Aligned_cols=80 Identities=14% Similarity=0.123 Sum_probs=56.1
Q ss_pred HHHHHhhcccceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHHhhcCCCHHHHHH
Q psy16878 88 CLQIKRDLSQGLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQTPELERRIMENHKKHAGQSPAAADL 167 (213)
Q Consensus 88 ~lQ~~~di~~g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~~P~~~~~~~~~i~~~h~~l~G~s~~~A~~ 167 (213)
|-++...|..-.-..+.++-+.|=||--||..||++... ++.+. -..+.=-+.|+++.|||+.+|+.
T Consensus 6 F~~A~~~vk~l~~~~~~~~~L~lYalyKQAt~Gd~~~~~---Pg~~d----------~~~~aKw~AW~~l~gms~eeA~~ 72 (87)
T 2cb8_A 6 FEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTER---PGMLD----------FTGKAKWDAWNELKGTSKEDAMK 72 (87)
T ss_dssp HHHHHHHGGGCSSCCCHHHHHHHHHHHHHHHTCSCCSCC---CCTTC----------HHHHHHHHHHHTTTTCCHHHHHH
T ss_pred HHHHHHHHHHccCCcCHHHHHHHHHHHHhhhhCCCCCCC---CCccc----------HHHHHHHHHHHHcCCCCHHHHHH
Confidence 334444444332356899999999999999999998543 23321 12233356899999999999999
Q ss_pred HHHHHHhcC-cCCC
Q psy16878 168 NLLETARRC-ELYG 180 (213)
Q Consensus 168 ~fL~~a~~l-~~YG 180 (213)
.|++.+.++ +.||
T Consensus 73 ~Yi~~v~~l~~~~~ 86 (87)
T 2cb8_A 73 AYINKVEELKKKYG 86 (87)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC
Confidence 999998764 3444
No 21
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=97.61 E-value=0.00043 Score=48.28 Aligned_cols=80 Identities=18% Similarity=0.100 Sum_probs=57.9
Q ss_pred HHHHHhhcccceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHHhhcCCCHHHHHH
Q psy16878 88 CLQIKRDLSQGLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQTPELERRIMENHKKHAGQSPAAADL 167 (213)
Q Consensus 88 ~lQ~~~di~~g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~~P~~~~~~~~~i~~~h~~l~G~s~~~A~~ 167 (213)
|-++...|..-.-..+.++-+.|=||--||..||++.... +.+. -..+.=-+.|+++.|||+.+|+.
T Consensus 8 F~~A~~~vk~l~~~p~~~~~L~lYalyKQAt~Gd~~~~~P---g~~d----------~~~~aKw~AW~~l~g~s~eeA~~ 74 (89)
T 3epy_A 8 FDRAAEDVRKLKARPDDGELKELYGLYKQAIVGDINIACP---GMLD----------LKGKAKWEAWNLKKGLSTEDATS 74 (89)
T ss_dssp HHHHHHHGGGCSSCCCHHHHHHHHHHHHHHHTCSCCSCCT---TTTC----------HHHHHHHHHHHTTTTCCHHHHHH
T ss_pred HHHHHHHHHHcCCCcCHHHHHHHHHHHHHHhhCCCCCCCC---cccc----------hHHHHHHHHHHHhhCCCHHHHHH
Confidence 4555555554444578899999999999999999975432 2221 11122345899999999999999
Q ss_pred HHHHHHhcC-cCCC
Q psy16878 168 NLLETARRC-ELYG 180 (213)
Q Consensus 168 ~fL~~a~~l-~~YG 180 (213)
.|++.+.++ +.||
T Consensus 75 ~Yi~~v~~l~~ky~ 88 (89)
T 3epy_A 75 AYISKAKELIEKYG 88 (89)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhhc
Confidence 999999764 4565
No 22
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=97.60 E-value=2.7e-05 Score=71.76 Aligned_cols=48 Identities=29% Similarity=0.430 Sum_probs=42.9
Q ss_pred ChhhhhhhhhcCCCCCCCCCCCccccCCCCCCC--------cHHHHHHHHHHhhhhh
Q psy16878 1 MASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQ--------TPELERRIMENHKKHA 49 (213)
Q Consensus 1 l~s~~~q~e~GD~~~~~~~~~~yl~~~~~~p~q--------~~~le~ki~~~hk~~~ 49 (213)
||||++|+++|||++..+ .++|+...+|+|.+ .++|+++|.+.|+++.
T Consensus 125 LAAL~lQae~GDy~~~~~-~~~yl~~~~~lP~~vl~~~~~s~e~~~~~I~~~hk~l~ 180 (575)
T 2i1j_A 125 LASYAVQARHGDHNPAVH-GPGFLANDRLLPQRVTDQHKMSREEWEQSITNWWQEHR 180 (575)
T ss_dssp HHHHHHHHHHCSCCTTTC-CTTTTTTCCCSCHHHHHTBCCCHHHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHhcCCChhhc-ccccccccccCCHHHHhhcCCCHHHHHHHHHHHHHHcc
Confidence 699999999999998876 57899999999984 3679999999999986
No 23
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=97.55 E-value=0.00038 Score=48.23 Aligned_cols=75 Identities=13% Similarity=0.098 Sum_probs=53.2
Q ss_pred HHHHhhcccceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHHhhcCCCHHHHHHH
Q psy16878 89 LQIKRDLSQGLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQTPELERRIMENHKKHAGQSPAAADLN 168 (213)
Q Consensus 89 lQ~~~di~~g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~~P~~~~~~~~~i~~~h~~l~G~s~~~A~~~ 168 (213)
-++...|.+-.-..+.++-+.|=||--||..||++... ++.+. -..+.=-+.|+++.|||+.+|+..
T Consensus 6 ~~A~~~v~~l~~~~~~~~~L~lYalyKQAt~Gd~~~~~---Pg~~d----------~~~raKw~AW~~l~gms~eeA~~~ 72 (86)
T 1st7_A 6 EEKAKAVNELPTKPSTDELLELYALYKQATVGDNDKEK---PGIFN----------MKDRYKWEAWENLKGKSQEDAEKE 72 (86)
T ss_dssp HHHHHHHTSCSSCCCHHHHHHHHHHHHHHHHCSCCCCC---CCSSC----------HHHHHHHHHHHTTTTTHHHHHHHH
T ss_pred HHHHHHHHHccCCcCHHHHHHHHHHHHHHhhCCCCCCC---CCccC----------HHHHHHHHHHHHcCCCCHHHHHHH
Confidence 33444433322346889999999999999999998543 23221 122333568999999999999999
Q ss_pred HHHHHhcC
Q psy16878 169 LLETARRC 176 (213)
Q Consensus 169 fL~~a~~l 176 (213)
|++.+.++
T Consensus 73 YI~~v~~l 80 (86)
T 1st7_A 73 YIALVDQL 80 (86)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998764
No 24
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=97.46 E-value=6.1e-05 Score=65.55 Aligned_cols=47 Identities=23% Similarity=0.436 Sum_probs=40.9
Q ss_pred ChhhhhhhhhcCCCCCCCCCCCccccCCCCCCC---cHHHHHHHHHHhhhhh
Q psy16878 1 MASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQ---TPELERRIMENHKKHA 49 (213)
Q Consensus 1 l~s~~~q~e~GD~~~~~~~~~~yl~~~~~~p~q---~~~le~ki~~~hk~~~ 49 (213)
||||++|+|+|||++..+ ..+|+...+++|.+ ..+ +++|.+.|++++
T Consensus 209 LAAl~~qae~Gd~~~~~~-~~~~~~l~~~lP~~~~~~~~-e~~I~~~~~~~~ 258 (371)
T 3ivf_A 209 FAGFQCQIQFGPHNEQKH-KAGFLDLKDFLPKEYVKQKG-ERKIFQAHKNCG 258 (371)
T ss_dssp HHHHHHHHHHCSCCTTTS-CTTCSCGGGTSCGGGTTSCH-HHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCChhhc-ccchhcccccCCHHHhCchH-HHHHHHHHHHcc
Confidence 699999999999998876 57899999999986 444 899999999987
No 25
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.44 E-value=0.00057 Score=49.42 Aligned_cols=80 Identities=10% Similarity=0.104 Sum_probs=56.5
Q ss_pred HHHHhhcccceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHHhhcCCCHHHHHHH
Q psy16878 89 LQIKRDLSQGLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQTPELERRIMENHKKHAGQSPAAADLN 168 (213)
Q Consensus 89 lQ~~~di~~g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~~P~~~~~~~~~i~~~h~~l~G~s~~~A~~~ 168 (213)
-++...|..-.-..+.++-+.|=||.-||..||++... +..+. -..+.=-+.|+++.|||+.+|+..
T Consensus 13 ~~A~~~vk~l~~~p~~~~~L~LYaLyKQAt~Gd~~~~~---Pg~~d----------~~~raKw~AW~~l~gms~eeAm~~ 79 (109)
T 2cop_A 13 EKAAAHLQGLIQVASREQLLYLYARYKQVKVGNCNTPK---PSFFD----------FEGKQKWEAWKALGDSSPSQAMQE 79 (109)
T ss_dssp HHHHHHHTTSTTTSCHHHHHHHHHHHHHHHTCSCCSCC---CCSSC----------HHHHHHHHHHHSCTTCCHHHHHHH
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHhhcCCCCCCC---CCccC----------HHHHHHHHHHHHhcCCCHHHHHHH
Confidence 33443333322346899999999999999999998643 23321 122333568999999999999999
Q ss_pred HHHHHhcC-cCCCC
Q psy16878 169 LLETARRC-ELYGV 181 (213)
Q Consensus 169 fL~~a~~l-~~YG~ 181 (213)
|++.+.++ |.|+.
T Consensus 80 YI~lv~~l~~~~~~ 93 (109)
T 2cop_A 80 YIAVVKKLDPGWNP 93 (109)
T ss_dssp HHHHHHHHCTTCCC
T ss_pred HHHHHHHHhhhhcc
Confidence 99999764 46653
No 26
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=97.44 E-value=2.6e-05 Score=66.71 Aligned_cols=47 Identities=28% Similarity=0.462 Sum_probs=39.6
Q ss_pred ChhhhhhhhhcCCCCCCCCCCCccc---cCCCCCCC-----cHHHHHHHHHHhhhh
Q psy16878 1 MASYIVQAECGDYVSEDYPDHTYLS---SYKFVPNQ-----TPELERRIMENHKKH 48 (213)
Q Consensus 1 l~s~~~q~e~GD~~~~~~~~~~yl~---~~~~~p~q-----~~~le~ki~~~hk~~ 48 (213)
||||++|+|+|||++..+ .++|++ ...++|.+ .++|+++|.+.|+++
T Consensus 140 LAAl~~q~e~Gd~~~~~~-~~~~l~~~~l~~~lP~~~~~~~~~~~~~~I~~~h~~~ 194 (322)
T 4dxa_B 140 LASLLLQIVYGNYESKKH-KQGFLNEENLKSIVPVTKLKSKAPHWTNRILHEYKNL 194 (322)
T ss_dssp HHHHHHHHHHCSCCHHHH-SSSCSCHHHHTTTSCTTTTTTTGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcccc-cccccchhhhhhhCCHHHHhcCHHHHHHHHHHHHHhc
Confidence 699999999999997765 467886 35689986 467999999999998
No 27
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=97.36 E-value=0.00083 Score=48.31 Aligned_cols=67 Identities=13% Similarity=0.081 Sum_probs=51.5
Q ss_pred cceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcC
Q psy16878 97 QGLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQTPELERRIMENHKKHAGQSPAAADLNLLETARRC 176 (213)
Q Consensus 97 ~g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~~P~~~~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l 176 (213)
.|....+.++-+.|=||.-||..||++.... +.+. -..+.=-+.|+++.|||+.+|+..|++.+.++
T Consensus 25 ~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~P---g~~d----------~~~~aKw~AW~~l~gms~eeA~~~YI~~v~~l 91 (106)
T 2wh5_A 25 NGSYRPSYEEMLRFYSYYKQATMGPCLVPRP---GFWD----------PIGRYKWDAWNSLGKMSREEAMSAYITEMKLV 91 (106)
T ss_dssp SCSCCCCHHHHHHHHHHHHHHHHCSCCSCCC---CTTC----------HHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHhhhccCCCCCCCC---Cccc----------HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 3556679999999999999999999975432 3321 11222356899999999999999999998764
No 28
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=97.24 E-value=0.00033 Score=49.53 Aligned_cols=68 Identities=16% Similarity=0.152 Sum_probs=51.2
Q ss_pred eecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhc-CcC
Q psy16878 100 LHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQTPELERRIMENHKKHAGQSPAAADLNLLETARR-CEL 178 (213)
Q Consensus 100 l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~~P~~~~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~-l~~ 178 (213)
-..+.++-+.|=||.-||..||++... ++.+. -..+.=-+.|+++.|||+.+|+..|++.+.+ .|.
T Consensus 27 ~~ps~~~~L~LYaLyKQAt~Gd~~~~~---Pg~~d----------~~graKw~AW~~l~gmS~eeAm~~YI~lv~~l~~~ 93 (96)
T 2lbb_A 27 MMASNDDKLCFYKYYKQATVGDCNKPK---PGMLQ----------LQEKYKWEAWNALRGMSTESAKEAYVKLLDTLAPS 93 (96)
T ss_dssp SCCCTTTTTHHHHHHHHTTTSSCCCCC---CCSSC----------SHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHCGG
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCCCC---CCccc----------HHhHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhch
Confidence 346888899999999999999998643 23331 1123335689999999999999999999865 445
Q ss_pred CC
Q psy16878 179 YG 180 (213)
Q Consensus 179 YG 180 (213)
||
T Consensus 94 ~~ 95 (96)
T 2lbb_A 94 WR 95 (96)
T ss_dssp GT
T ss_pred hc
Confidence 54
No 29
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=97.23 E-value=0.0013 Score=48.15 Aligned_cols=66 Identities=12% Similarity=0.120 Sum_probs=50.6
Q ss_pred ceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcC
Q psy16878 98 GLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQTPELERRIMENHKKHAGQSPAAADLNLLETARRC 176 (213)
Q Consensus 98 g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~~P~~~~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l 176 (213)
|....+.++-+.|=||.-||..||++.... +.+. -..+.=-+.|+++.|||+.+|+..|++.+.++
T Consensus 42 g~~~ps~d~~L~LYaLyKQAT~Gd~~~~~P---g~~d----------~~graKw~AW~~l~gmS~eeAm~~YI~~v~~l 107 (119)
T 3flv_A 42 GSFQPTNEMMLKFYSFYKQATEGPCKLSRP---GFWD----------PIGRYKWDAWSSLGDMTKEEAMIAYVEEMKKI 107 (119)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHTCSCCSCCC---CTTC----------HHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHhcCCCCCCCC---CccC----------HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHH
Confidence 445679999999999999999999975432 2321 11223345899999999999999999998763
No 30
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=97.15 E-value=0.0018 Score=46.50 Aligned_cols=66 Identities=17% Similarity=0.157 Sum_probs=50.6
Q ss_pred ceeecCHHHHHHHHHHHHHHHhCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcC
Q psy16878 98 GLLHCNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQTPELERRIMENHKKHAGQSPAAADLNLLETARRC 176 (213)
Q Consensus 98 g~l~~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~~P~~~~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l 176 (213)
|....+.++-+.|=||.-||..||++... ++++. -..+.=-+.|+++.|||+.+|+..|++.+.++
T Consensus 22 g~~~ps~~~~L~LYalyKQAt~Gd~~~~~---Pg~~d----------~~~raKw~AW~~l~gmS~eeA~~~YI~~v~~l 87 (106)
T 3fp5_A 22 GPIKPTQDEQLYFYKYFKQATVGDVNISR---PGLMD----------FTGKAKWDAWKSVEGTSKEVAYQKYVEKLLEI 87 (106)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHTCSCCSCC---CCTTC----------HHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHhcCCCCCCC---CCccc----------hHHHHHHHHHHHccCCCHHHHHHHHHHHHHHH
Confidence 44567999999999999999999997543 22221 11222345899999999999999999998753
No 31
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.02 E-value=0.0016 Score=47.52 Aligned_cols=66 Identities=9% Similarity=0.010 Sum_probs=50.0
Q ss_pred cCHHHHHHHHHHHHHHHhCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHHhhcCCCHHHHHHHHHHHHhcC-cCCC
Q psy16878 102 CNENTAALMASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQTPELERRIMENHKKHAGQSPAAADLNLLETARRC-ELYG 180 (213)
Q Consensus 102 ~~~~~a~~Laal~lQa~~Gd~~~~~~~~~~~l~~~~~~P~~~~~~~~~i~~~h~~l~G~s~~~A~~~fL~~a~~l-~~YG 180 (213)
.+.++-+.|=||.-||..||++... ++.+. -..+.=-+.|+++.|||+.+|+..|++.+.++ |.|+
T Consensus 34 p~~~~~L~LYaLyKQAt~Gd~~~~~---Pg~~d----------~~graKw~AW~~l~gms~eeAm~~YI~lv~~l~~~~~ 100 (116)
T 2cqu_A 34 PGNEVKLKLYALYKQATEGPCNMPK---PGVFD----------LINKAKWDAWNALGSLPKEAARQNYVDLVSSLSPSLE 100 (116)
T ss_dssp CCHHHHHHHHHHHTTTTTCSCCSCC---CCTTC----------HHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHHCSCCC
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCCC---CCccc----------HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHccccc
Confidence 5889999999999999999997543 23321 11223356899999999999999999999764 3444
No 32
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=93.97 E-value=0.0049 Score=53.63 Aligned_cols=49 Identities=14% Similarity=0.301 Sum_probs=36.4
Q ss_pred ChhhhhhhhhcCCCCCCCC---CCCccc----cCCCCCCCc------HHHHHHHHHHhhhhh
Q psy16878 1 MASYIVQAECGDYVSEDYP---DHTYLS----SYKFVPNQT------PELERRIMENHKKHA 49 (213)
Q Consensus 1 l~s~~~q~e~GD~~~~~~~---~~~yl~----~~~~~p~q~------~~le~ki~~~hk~~~ 49 (213)
|||+.+|+++|||++.... ..+|+. ..+|+|.+. .++.++|...|+++.
T Consensus 141 LAaL~~q~~~gD~~~~~~~~k~~~~~l~k~~~l~~flP~~~~~~~~~~~~~k~I~~~~k~~~ 202 (375)
T 2al6_A 141 LGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFA 202 (375)
T ss_dssp HHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhccchhhcccCCHHHhhhcccHHHhCCHHHHHHhChHHHHHHHHHHHHHhh
Confidence 6999999999999744110 123443 347999853 589999999999986
No 33
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=93.92 E-value=0.0054 Score=57.28 Aligned_cols=45 Identities=16% Similarity=0.253 Sum_probs=33.2
Q ss_pred ChhhhhhhhhcCCCCCCCCCCCccccCCCCCCC-------cHHHHHHHHHHhhhh
Q psy16878 1 MASYIVQAECGDYVSEDYPDHTYLSSYKFVPNQ-------TPELERRIMENHKKH 48 (213)
Q Consensus 1 l~s~~~q~e~GD~~~~~~~~~~yl~~~~~~p~q-------~~~le~ki~~~hk~~ 48 (213)
||||++|+|+|||++..+ ....+.. ++|.+ .++|+++|.+.|+++
T Consensus 397 LAAl~~Qae~Gd~~~~~~-~~~~L~~--~lP~~~l~~~~~~~~w~~~I~~~hkk~ 448 (655)
T 3pvl_A 397 LASQQYFVDYGSEMILER-LLSLVPT--YIPDREITPLKNLEKWAQLAIAAHKKG 448 (655)
T ss_dssp HHHHHHHHHHTTCCCHHH-HHHHHHH--HSCGGGCCSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcchhh-HHHHHHH--hCCHHHHhccCCHHHHHHHHHHHHHhh
Confidence 699999999999976532 1122332 46653 578999999999998
No 34
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=92.44 E-value=0.07 Score=48.55 Aligned_cols=16 Identities=31% Similarity=0.385 Sum_probs=14.7
Q ss_pred ChhhhhhhhhcCCCCC
Q psy16878 1 MASYIVQAECGDYVSE 16 (213)
Q Consensus 1 l~s~~~q~e~GD~~~~ 16 (213)
||||.+|+++|||++.
T Consensus 347 LAAl~lQ~~~GD~~~~ 362 (555)
T 3au4_A 347 LAALRLQYLQGDYTLH 362 (555)
T ss_dssp HHHHHHHHHHCSCCTT
T ss_pred HHHHHHHHHcCCCccc
Confidence 6999999999999875
No 35
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=66.48 E-value=1 Score=41.58 Aligned_cols=49 Identities=12% Similarity=0.289 Sum_probs=35.3
Q ss_pred ChhhhhhhhhcCCCCCCCC---CCCc----cccCCCCC------CCcHHHHHHHHHHhhhhh
Q psy16878 1 MASYIVQAECGDYVSEDYP---DHTY----LSSYKFVP------NQTPELERRIMENHKKHA 49 (213)
Q Consensus 1 l~s~~~q~e~GD~~~~~~~---~~~y----l~~~~~~p------~q~~~le~ki~~~hk~~~ 49 (213)
||++.+|+++||++..... ..++ ++..+|+| .+..++.++|.+.||++.
T Consensus 141 La~l~~~~~~~d~~~~a~~~~~~~~~~~k~~~~~~fiP~~~~~~~~~~~~~k~i~~~~k~~~ 202 (656)
T 2j0j_A 141 LGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFA 202 (656)
T ss_dssp HHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTTGGGTSCHHHHHHSCHHHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHhhhccchhhhcCCCHHHHHhhccHHHhCCHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 6899999999999544110 0112 33348999 477789999999999875
No 36
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=58.66 E-value=3.4 Score=35.89 Aligned_cols=49 Identities=12% Similarity=0.194 Sum_probs=34.9
Q ss_pred ChhhhhhhhhcCCCCCCCC---CCCc----cccCCCCCCC------cHHHHHHHHHHhhhhh
Q psy16878 1 MASYIVQAECGDYVSEDYP---DHTY----LSSYKFVPNQ------TPELERRIMENHKKHA 49 (213)
Q Consensus 1 l~s~~~q~e~GD~~~~~~~---~~~y----l~~~~~~p~q------~~~le~ki~~~hk~~~ 49 (213)
||++.+|+++||++..... ..++ ++...|+|.. ..++.++|...|+++.
T Consensus 161 LAaL~~q~~~gd~~~~a~~~k~~~~~l~k~~~lk~flP~~l~~~ik~k~~rk~I~~~~kk~~ 222 (392)
T 4eku_A 161 LGCLELRRFFKDMPHNALDKKSNFELLEKEVGLDLFFPKQMQENLKPKQFRKMIQQTFQQYA 222 (392)
T ss_dssp HHHHHHHHHTTTSCTTGGGSHHHHHHHHHHTCGGGTSCHHHHHHSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhcchhhhccCCCHHHHhhhccHHHhcCHHHHhhcCHHHHHHHHHHHHHHhc
Confidence 6899999999999753210 1122 3445689973 4578999999999886
No 37
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=26.43 E-value=46 Score=24.44 Aligned_cols=23 Identities=22% Similarity=0.388 Sum_probs=19.7
Q ss_pred CCCCeEEEEEeCCccEEEcCCcc
Q psy16878 189 HDNILLNLSVAHMGILVFQNQTK 211 (213)
Q Consensus 189 ~~~~~~~lgv~~~Gi~v~~~~~k 211 (213)
+....+.|-||.+||.|.+..++
T Consensus 58 ~~~~~v~L~IS~~GI~v~d~~tk 80 (152)
T 1ntv_A 58 EHKQKIFLTISFGGIKIFDEKTG 80 (152)
T ss_dssp CCCEEEEEEEETTEEEEEETTTC
T ss_pred CCCCEEEEEEECCeEEEEECCCC
Confidence 34579999999999999998775
No 38
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus}
Probab=25.74 E-value=52 Score=23.29 Aligned_cols=23 Identities=22% Similarity=0.263 Sum_probs=19.3
Q ss_pred CCCCeEEEEEeCCccEEEcCCcc
Q psy16878 189 HDNILLNLSVAHMGILVFQNQTK 211 (213)
Q Consensus 189 ~~~~~~~lgv~~~Gi~v~~~~~k 211 (213)
+.+.++.|-|+.+||.+.+..++
T Consensus 41 ~~~~~v~L~Vs~~gi~l~d~~~~ 63 (137)
T 3so6_A 41 KKLQKVTLKVSPRGIILTDSLTS 63 (137)
T ss_dssp SCCEEEEEEEETTEEEEEETTTC
T ss_pred CCCCEEEEEEeCCeEEEEECCCC
Confidence 34678999999999999988764
No 39
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=24.17 E-value=54 Score=24.33 Aligned_cols=22 Identities=14% Similarity=0.262 Sum_probs=19.0
Q ss_pred CCCeEEEEEeCCccEEEcCCcc
Q psy16878 190 DNILLNLSVAHMGILVFQNQTK 211 (213)
Q Consensus 190 ~~~~~~lgv~~~Gi~v~~~~~k 211 (213)
....+.|-||.+||.|.+..+|
T Consensus 58 ~~~~V~L~IS~~GI~v~d~~tk 79 (160)
T 1p3r_A 58 HKQRIWVNISLSGIKIIDEKTG 79 (160)
T ss_dssp CCEEEEEEEETTEEEEEETTTC
T ss_pred CCCEEEEEEECCeEEEEECCCC
Confidence 4567999999999999998776
No 40
>4dx8_A Integrin beta-1-binding protein 1; protein-protien complex, PTB domain, nudix fold, protein-Pro interaction, membrane, nucleus, protein binding; 2.54A {Homo sapiens} PDB: 4dx9_A
Probab=20.39 E-value=2.1e+02 Score=21.25 Aligned_cols=42 Identities=14% Similarity=0.143 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhcCcCCCCeeeeccCCCCCeEEEEEeCCccEEEcCCcc
Q psy16878 164 AADLNLLETARRCELYGVKLHPAKDHDNILLNLSVAHMGILVFQNQTK 211 (213)
Q Consensus 164 ~A~~~fL~~a~~l~~YG~~~f~vkd~~~~~~~lgv~~~Gi~v~~~~~k 211 (213)
.-.++||+.||++..- .|...++ .+.++|+..||.|-..+.+
T Consensus 40 ~ell~~ID~aQq~gkL---P~~~~~E---dvi~svSkyGvkl~~~d~~ 81 (154)
T 4dx8_A 40 LDLINYIDVAQQDGKL---PFVPPEE---EFIMGVSKYGIKVSTSDQY 81 (154)
T ss_dssp HHHHHHHHHHHHTTSS---CSSCCSC---CEEEEEETTEEEEEETTSC
T ss_pred HHHHHHHHHHHHhCcC---CCCCCcC---eEEEEEeccCcEEEeccCc
Confidence 3378899999987432 2333433 5899999999999876543
Done!