BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16880
(84 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55FR9|COPA_DICDI Coatomer subunit alpha OS=Dictyostelium discoideum GN=copa PE=3
SV=1
Length = 1221
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 11 SNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTL 63
+ VR I+F Q +SGGDD I +WN + C +RS+ F + +
Sbjct: 49 EHEGPVRGINFHMTQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWI 108
Query: 64 ISGGDDGSICMWNLNSKLC 82
+S DD I +WN S+ C
Sbjct: 109 VSSSDDMVIRIWNWQSRTC 127
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISG 66
S V+ +SF + +++ GSI +++ K + VR I+F Q +SG
Sbjct: 10 SRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFHMTQPLFVSG 69
Query: 67 GDDGSICMWNLNSKLC 82
GDD I +WN + C
Sbjct: 70 GDDYKIKVWNYKQRRC 85
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 20 SFCSKQHTLISGGDDGSICMWNLNSKLCDSA------VRSISFCSKQRTLISGGDDGSIC 73
SF Q ++S DD + +W +N + D+ V F +Q +IS +D +I
Sbjct: 211 SFHPTQPYIVSASDDHQVKLWRMNDPIVDTFRGHYNNVSCALFHPRQDLIISNSEDKTIR 270
Query: 74 MWNLNSK 80
+W++ K
Sbjct: 271 VWDIIKK 277
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGD 68
+RS+ F + ++S DD I +WN S+ C + V S F K ++S
Sbjct: 96 IRSVEFHREAPWIVSSSDDMVIRIWNWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASL 155
Query: 69 DGSICMWNL 77
D +I +W++
Sbjct: 156 DQTIRIWDI 164
>sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2
SV=1
Length = 1218
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCD-------SAVRSI 54
G++I F + VR + F + Q +SGGDD I +WN + C +R++
Sbjct: 41 GTLIDRF-DEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTV 99
Query: 55 SFCSKQRTLISGGDDGSICMWNLNSKLC 82
F + ++S DD +I +WN S+ C
Sbjct: 100 QFHHENPWIVSASDDQTIRIWNWQSRTC 127
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN-SKLCD------SAVRSISFCSK 59
T + ++ V+ +SF K+ +++ G I +W+ L D VR + F +
Sbjct: 3 TKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNS 62
Query: 60 QRTLISGGDDGSICMWNLNSKLC 82
Q +SGGDD I +WN + C
Sbjct: 63 QPLFVSGGDDYKIKVWNYKTHRC 85
Score = 36.2 bits (82), Expect = 0.059, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSA-------VRSISFCSKQRTLISGGD 68
+R++ F + ++S DD +I +WN S+ C S V SF K+ ++S
Sbjct: 96 IRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
Query: 69 DGSICMWNLNS 79
D ++ +W++ +
Sbjct: 156 DQTVRVWDIGA 166
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN-SKLCD--------SAVRS 53
+I+ + ++ V SF ++SG DD + +W +N +K + + V S
Sbjct: 194 AIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSS 253
Query: 54 ISFCSKQRTLISGGDDGSICMWNLNSK 80
+ F +KQ ++S +D SI +W+ +
Sbjct: 254 VMFHAKQDIIVSNSEDKSIRVWDATKR 280
>sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1
SV=2
Length = 1216
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCD-------SAVRSI 54
G++I F + VR + F + Q +SGGDD I +WN + C +R++
Sbjct: 41 GTLIDRF-DEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTV 99
Query: 55 SFCSKQRTLISGGDDGSICMWNLNSKLC 82
F + ++S DD +I +WN S+ C
Sbjct: 100 QFHHEYPWIVSASDDQTIRIWNWQSRTC 127
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN-SKLCD------SAVRSISFCSK 59
T + ++ V+ +SF K+ +++ G I +W+ L D VR + F +
Sbjct: 3 TKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNS 62
Query: 60 QRTLISGGDDGSICMWNLNSKLC 82
Q +SGGDD I +WN + C
Sbjct: 63 QPLFVSGGDDYKIKVWNYKNHRC 85
Score = 35.8 bits (81), Expect = 0.080, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSA-------VRSISFCSKQRTLISGGD 68
+R++ F + ++S DD +I +WN S+ C S V SF K+ ++S
Sbjct: 96 IRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASL 155
Query: 69 DGSICMWNLNS 79
D ++ +W++ +
Sbjct: 156 DQTVRVWDIGA 166
Score = 33.5 bits (75), Expect = 0.35, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN-SKLCD--------SAVRS 53
+I+ + ++ V +F ++SG DD + +W +N +K + + V S
Sbjct: 194 AIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSS 253
Query: 54 ISFCSKQRTLISGGDDGSICMWNLNSK 80
+ F +KQ ++S +D SI +W+ +
Sbjct: 254 VMFHAKQDIIVSNSEDKSIRVWDATKR 280
>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica
GN=Os09g0127800 PE=2 SV=1
Length = 1218
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCD-------SAVRSI 54
G+++ F ++ VR + F + Q +SGGDD I +WN + C +R++
Sbjct: 41 GTLLDRF-DEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTV 99
Query: 55 SFCSKQRTLISGGDDGSICMWNLNSKLC 82
F + ++S DD +I +WN S+ C
Sbjct: 100 QFHHEYPWIVSASDDQTIRIWNWQSRTC 127
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSK 59
T + ++ V+ +SF ++ +++ G I MW+ D VR + F +
Sbjct: 3 TKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHAT 62
Query: 60 QRTLISGGDDGSICMWNLNSKLC 82
Q +SGGDD I +WN + C
Sbjct: 63 QPLFVSGGDDYKIKVWNYKTHRC 85
Score = 36.2 bits (82), Expect = 0.056, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQR 61
+H + +R++ F + ++S DD +I +WN S+ C + V SF K+
Sbjct: 89 LHGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKED 148
Query: 62 TLISGGDDGSICMWNLNS 79
++S D ++ +W++ +
Sbjct: 149 LVVSASLDQTVRVWDIGA 166
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN-SKLCD--------SAVRS 53
+++ + ++ V SF ++SG DD + +W +N +K + + V
Sbjct: 194 AVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSC 253
Query: 54 ISFCSKQRTLISGGDDGSICMWNLNSK 80
+ F +KQ ++S +D SI +W+ +
Sbjct: 254 VMFHAKQDIIVSNSEDKSIRVWDATKR 280
>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica
GN=Os03g0711400 PE=2 SV=1
Length = 1218
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCD-------SAVRSI 54
G+++ F ++ VR + F + Q +SGGDD I +WN + C +R++
Sbjct: 41 GTLLDRF-DEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTV 99
Query: 55 SFCSKQRTLISGGDDGSICMWNLNSKLC 82
F + ++S DD +I +WN S+ C
Sbjct: 100 QFHHEYPWIVSASDDQTIRIWNWQSRTC 127
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSK 59
T + ++ V+ +SF ++ +++ G I MW+ D VR + F +
Sbjct: 3 TKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHAT 62
Query: 60 QRTLISGGDDGSICMWNLNSKLC 82
Q +SGGDD I +WN + C
Sbjct: 63 QPLFVSGGDDYKIKVWNYKTHRC 85
Score = 36.2 bits (82), Expect = 0.056, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQR 61
+H + +R++ F + ++S DD +I +WN S+ C + V SF K+
Sbjct: 89 LHGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKED 148
Query: 62 TLISGGDDGSICMWNLNS 79
++S D ++ +W++ +
Sbjct: 149 LVVSASLDQTVRVWDIGA 166
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN-SKLCD--------SAVRS 53
+++ + ++ V SF ++SG DD + +W +N +K + + V
Sbjct: 194 AVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSC 253
Query: 54 ISFCSKQRTLISGGDDGSICMWNLNSK 80
+ F +KQ ++S +D SI +W+ +
Sbjct: 254 VMFHAKQDIIVSNSEDKSIRIWDATKR 280
>sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica
GN=Os03g0711500 PE=2 SV=1
Length = 1218
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCD-------SAVRSI 54
G+++ F ++ VR + F + Q +SGGDD I +WN + C +R++
Sbjct: 41 GTLLDRF-DEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTV 99
Query: 55 SFCSKQRTLISGGDDGSICMWNLNSKLC 82
F + ++S DD +I +WN S+ C
Sbjct: 100 QFHHECPWIVSASDDQTIRIWNWQSRTC 127
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSK 59
T + ++ V+ +SF ++ +++ G I MW+ D VR + F +
Sbjct: 3 TKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHAT 62
Query: 60 QRTLISGGDDGSICMWNLNSKLC 82
Q +SGGDD I +WN + C
Sbjct: 63 QPLFVSGGDDYKIKVWNYKTHRC 85
Score = 36.2 bits (82), Expect = 0.063, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQR 61
+H + +R++ F + ++S DD +I +WN S+ C + V SF K+
Sbjct: 89 LHGHLDYIRTVQFHHECPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKED 148
Query: 62 TLISGGDDGSICMWNLNS 79
++S D ++ +W++++
Sbjct: 149 LVVSASLDQTVRVWDISA 166
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN-SKLCD--------SAVRS 53
+++ + ++ V SF ++SG DD + +W +N +K + + V
Sbjct: 194 AVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWEVDTLRGHMNNVSC 253
Query: 54 ISFCSKQRTLISGGDDGSICMWNLNSK 80
+ F +KQ ++S +D SI +W+ +
Sbjct: 254 VMFHAKQDIIVSNSEDKSIRIWDATKR 280
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSI 54
G I H S VR +F L+SGG DGSI +W+ S+ D+++ +
Sbjct: 86 GEIEAVLEHPGRSPVRVCAFSPDSSHLVSGGSDGSIALWDFTSRTLRRTGVVNDTSIVAC 145
Query: 55 SFCSKQRTLISGGDDGSICMWNLN 78
SF + I+G G + +W+LN
Sbjct: 146 SFTPCGQMFITGSTYGDLRLWDLN 169
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 28 LISGGDDGSICMWNLNSKLCD--------SAVRSISFCSKQRTLISGGDDGSICMWNLNS 79
L S D + +W++++ + S VR +F L+SGG DGSI +W+ S
Sbjct: 69 LASCSTDATTMVWSMDTGEIEAVLEHPGRSPVRVCAFSPDSSHLVSGGSDGSIALWDFTS 128
Query: 80 KLCDR 84
+ R
Sbjct: 129 RTLRR 133
>sp|Q9EPN1|NBEA_MOUSE Neurobeachin OS=Mus musculus GN=Nbea PE=1 SV=1
Length = 2936
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNS-------KLCDSAVRSISFCSKQRTLIS 65
N + R+I S L++GGD+G + +W CD+ +R++ QRTLI+
Sbjct: 2852 NDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLIT 2911
Query: 66 GGDDGSICMWNLN 78
G GSI +N++
Sbjct: 2912 GMASGSIVAFNID 2924
>sp|Q8NFP9|NBEA_HUMAN Neurobeachin OS=Homo sapiens GN=NBEA PE=1 SV=3
Length = 2946
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNS-------KLCDSAVRSISFCSKQRTLIS 65
N + R+I S L++GGD+G + +W CD+ +R++ QRTLI+
Sbjct: 2862 NDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLIT 2921
Query: 66 GGDDGSICMWNLN 78
G GSI +N++
Sbjct: 2922 GMASGSIVAFNID 2934
>sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b
PE=2 SV=1
Length = 470
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSK-----LCDSA--VRSISFCSK 59
+ + ++ + VR ++F S HT I+ DD SI WNL+ + L + VR F
Sbjct: 96 SVLKAHTAVVRCVNFSSDGHTFITASDDKSIKAWNLHRQRFLYSLTEHTNWVRCARFSPD 155
Query: 60 QRTLISGGDDGSICMWNLNSKLC 82
R + S DD ++ +W++ ++LC
Sbjct: 156 GRLIASCSDDKTVRIWDITNRLC 178
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 6 HTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWN-LNSKLC------DSAVRSISFCS 58
H VH N+ V S+SF + L++ +DG++ + + L +L V S++F
Sbjct: 223 HYQVH--NAGVNSLSFHPSGNYLLTASNDGTVKILDLLEGRLIYTLHGHQGPVLSVAFSK 280
Query: 59 KQRTLISGGDDGSICMWNLN 78
SG D + +W N
Sbjct: 281 SGDQFASGATDAQVLVWKTN 300
>sp|Q3MJ13|WDR72_HUMAN WD repeat-containing protein 72 OS=Homo sapiens GN=WDR72 PE=2
SV=2
Length = 1102
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 15/82 (18%)
Query: 15 AVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSA--------------VRSISFCSKQ 60
++ +I Q T+++G +G +C+WNL+ +L SA R+ F SKQ
Sbjct: 19 SITAIMITDDQRTIVTGSQEGQLCLWNLSHELKISAKELLFGHSASVTCLARARDF-SKQ 77
Query: 61 RTLISGGDDGSICMWNLNSKLC 82
++S ++G +C+WN+ + C
Sbjct: 78 PYIVSAAENGEMCVWNVTNGQC 99
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 36 SICMWNLNSKLCDSAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81
++ +W K ++ +I QRT+++G +G +C+WNL+ +L
Sbjct: 7 AVALWG--QKAPPHSITAIMITDDQRTIVTGSQEGQLCLWNLSHEL 50
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 10 HSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRT 62
+ S VRS+ F S L SG DD ++ +W+++S C S VRS+ F
Sbjct: 1029 QGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAM 1088
Query: 63 LISGGDDGSICMWNLNSKLC 82
L SGGDD + +W+++S C
Sbjct: 1089 LASGGDDQIVRLWDISSGNC 1108
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQR 61
+ +N+ V SI F L SG DD ++ +WN++S C ++VRS++F S
Sbjct: 1406 LQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGL 1465
Query: 62 TLISGGDDGSICMWNLNSKLC 82
L SG DD +I +W++ + C
Sbjct: 1466 ILASGSDDETIKLWDVKTGEC 1486
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 12 NNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLI 64
+NS V S+ F L SG DD ++ +W+++S C S VRS+ F L
Sbjct: 905 HNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLA 964
Query: 65 SGGDDGSICMWNLNSKLC 82
SG D ++ +W+++S C
Sbjct: 965 SGSSDQTVRLWDISSGEC 982
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQR 61
+ + S VRS+ F L SGGDD + +W+++S C S VR + F
Sbjct: 1070 LQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGV 1129
Query: 62 TLISGGDDGSICMWNLNSKLC 82
TL +G D + +W+++SK C
Sbjct: 1130 TLANGSSDQIVRLWDISSKKC 1150
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 5 IHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFC 57
+HTF + S V S++F L SG DD ++ +W+++S C + V S+ F
Sbjct: 1319 LHTF-QGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFS 1377
Query: 58 SKQRTLISGGDDGSICMWNLNSKLC 82
L SG D ++ +W+++S C
Sbjct: 1378 PDGAILASGSGDQTVRLWSISSGKC 1402
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQR 61
+ + S V S+ F TL SG D ++ +W +NS C S V S+ F
Sbjct: 1196 LQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGS 1255
Query: 62 TLISGGDDGSICMWNLNSKLC 82
L SG D ++ +W+++S C
Sbjct: 1256 MLASGSSDKTVRLWDISSSKC 1276
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSAVRS 53
G ++T +H + ++VRS++F S L SG DD +I +W++ + C ++S
Sbjct: 1442 GECLYT-LHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTLKS 1492
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 15 AVRSISFCSKQHTLISGGDDGSICMWN-------LNSKLCDSAVRSISFCSKQRTLISGG 67
+V +++F +G G + W L K +S V S+ F + L SG
Sbjct: 866 SVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGS 925
Query: 68 DDGSICMWNLNSKLC 82
DD ++ +W+++S C
Sbjct: 926 DDQTVRLWDISSGQC 940
>sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBPJ4664.04 PE=1 SV=1
Length = 1207
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSK-----LCDSA--VRSI 54
G+++ F ++ VR I+F Q +SGGDD + +WN S+ LC VR
Sbjct: 43 GTLLDRF-DGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVC 101
Query: 55 SFCSKQRTLISGGDDGSICMWNLNSKLC 82
+F + ++S DD +I +WN S+ C
Sbjct: 102 TFHHEYPWILSCSDDQTIRIWNWQSRNC 129
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSK 59
T S +S + ++F Q +++ +G I +W+ D VR I+F
Sbjct: 5 TKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPT 64
Query: 60 QRTLISGGDDGSICMWNLNSK 80
Q +SGGDD + +WN S+
Sbjct: 65 QPLFVSGGDDYKVNVWNYKSR 85
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Query: 17 RSISFCSKQHTL---ISGGDDGSICMWNLNSK------LCDSAVRSISFC---SKQRTLI 64
R +++C+ TL +S GDD + +W + + C ++S C Q ++
Sbjct: 213 RGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELIL 272
Query: 65 SGGDDGSICMWNLNSK 80
S +D +I +W+LN +
Sbjct: 273 SASEDKTIRVWDLNRR 288
>sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=COP1 PE=1 SV=2
Length = 1201
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSA-------VRSI 54
G+++H F + VR + F Q +S GDD +I +W+L++ C VR++
Sbjct: 43 GTLLHRF-EDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTV 101
Query: 55 SFCSKQRTLISGGDDGSICMWNLNSK 80
F + +IS DD +I +WN ++
Sbjct: 102 FFHRELPWIISASDDQTIRIWNWQNR 127
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 1 DGS----IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSK------LC--- 47
DGS ++ + + V SF ++SG DD + +W +++ C
Sbjct: 193 DGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGH 252
Query: 48 DSAVRSISFCSKQRTLISGGDDGSICMWNLNSK 80
+ V S+ F Q +IS G+D ++ +W+L+ +
Sbjct: 253 TNNVDSVIFHPHQNLIISVGEDKTLRVWDLDKR 285
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 48 DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82
+ VR + F Q +S GDD +I +W+L++ C
Sbjct: 53 EGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKC 87
>sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=2
Length = 1224
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 12 NNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCD-------SAVRSISFCSKQRTLI 64
++ VR I F +Q +SGGDD I +WN + C +R+ F + ++
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 109
Query: 65 SGGDDGSICMWNLNSKLC 82
S DD +I +WN S+ C
Sbjct: 110 SASDDQTIRVWNWQSRTC 127
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFC 57
T + ++ V+ +SF K+ +++ +G I +W+ ++C D VR I F
Sbjct: 3 TKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDY--RMCTLIDKFDEHDGPVRGIDFH 60
Query: 58 SKQRTLISGGDDGSICMWNLNSKLC 82
+Q +SGGDD I +WN + C
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRC 85
Score = 32.3 bits (72), Expect = 0.76, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSK------LCDSAVRSIS- 55
+++ + ++ V +F ++SG DD + +W +N C ++S
Sbjct: 195 AVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSC 254
Query: 56 --FCSKQRTLISGGDDGSICMWNLNSK 80
F +Q ++S +D SI +W+++ +
Sbjct: 255 AVFHPRQELILSNSEDKSIRVWDMSKR 281
>sp|P53621|COPA_HUMAN Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2
Length = 1224
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 12 NNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCD-------SAVRSISFCSKQRTLI 64
++ VR I F +Q +SGGDD I +WN + C +R+ F + ++
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 109
Query: 65 SGGDDGSICMWNLNSKLC 82
S DD +I +WN S+ C
Sbjct: 110 SASDDQTIRVWNWQSRTC 127
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFC 57
T + ++ V+ +SF K+ +++ +G I +W+ ++C D VR I F
Sbjct: 3 TKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDY--RMCTLIDKFDEHDGPVRGIDFH 60
Query: 58 SKQRTLISGGDDGSICMWNLNSKLC 82
+Q +SGGDD I +WN + C
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRC 85
Score = 32.3 bits (72), Expect = 0.76, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSK------LCDSAVRSIS- 55
+++ + ++ V +F ++SG DD + +W +N C ++S
Sbjct: 195 AVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSC 254
Query: 56 --FCSKQRTLISGGDDGSICMWNLNSK 80
F +Q ++S +D SI +W+++ +
Sbjct: 255 AVFHPRQELILSNSEDKSIRVWDMSKR 281
>sp|Q27954|COPA_BOVIN Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1
Length = 1224
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 12 NNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCD-------SAVRSISFCSKQRTLI 64
++ VR I F +Q +SGGDD I +WN + C +R+ F + ++
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 109
Query: 65 SGGDDGSICMWNLNSKLC 82
S DD +I +WN S+ C
Sbjct: 110 SASDDQTIRVWNWQSRTC 127
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFC 57
T + ++ V+ +SF K+ +++ +G I +W+ ++C D VR I F
Sbjct: 3 TKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDY--RMCTLIDKFDEHDGPVRGIDFH 60
Query: 58 SKQRTLISGGDDGSICMWNLNSKLC 82
+Q +SGGDD I +WN + C
Sbjct: 61 KQQPLFVSGGDDYKIKVWNYKLRRC 85
Score = 32.3 bits (72), Expect = 0.76, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSK------LCDSAVRSIS- 55
+++ + ++ V +F ++SG DD + +W +N C ++S
Sbjct: 195 AVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSC 254
Query: 56 --FCSKQRTLISGGDDGSICMWNLNSK 80
F +Q ++S +D SI +W+++ +
Sbjct: 255 AVFHPRQELILSNSEDKSIRVWDMSKR 281
>sp|Q4V7Z1|POC1B_XENLA POC1 centriolar protein homolog B OS=Xenopus laevis GN=poc1b PE=1
SV=1
Length = 468
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSK 59
T + ++ + VR ++F S T I+ DD SI WNL+ + + VR F
Sbjct: 96 TVLKAHTAVVRCVNFSSDGQTFITASDDKSIKAWNLHRQRFLFSLTQHTNWVRCARFSPD 155
Query: 60 QRTLISGGDDGSICMWNLNSKLC 82
R + S DD ++ +W+L ++LC
Sbjct: 156 GRLIASCSDDKTVRIWDLTNRLC 178
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQR 61
+ S+ VRS++F + TL SG D +I +WN ++ C ++V SI++ +
Sbjct: 806 LKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSK 865
Query: 62 TLISGGDDGSICMWNLNSKLC 82
L+SG D +I +W+ + +C
Sbjct: 866 ILVSGSGDRTIKLWDCQTHIC 886
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 10 HSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSA-------VRSISFCSKQRT 62
+ N ++F + L SG +D ++ +W+ + S+ + I+F +T
Sbjct: 933 YGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQT 992
Query: 63 LISGGDDGSICMWNLNSKLC 82
L S D S+ +WN+++ C
Sbjct: 993 LASASTDSSVRLWNISTGQC 1012
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGD 68
V I+F L S D ++ +W++N+ C V S++F + SG
Sbjct: 1149 VFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQ 1208
Query: 69 DGSICMWNLNSKLC 82
D ++ +WN+ + C
Sbjct: 1209 DQTVRIWNVKTGEC 1222
>sp|Q9C1X1|PWP2_SCHPO Periodic tryptophan protein 2 homolog OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC713.04c PE=1 SV=1
Length = 854
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 10 HSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRT 62
S+ A+ ++ + S +I+G DDG I +W++NS C SAV + F +
Sbjct: 336 QSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNV 395
Query: 63 LISGGDDGSICMWNL 77
L S DGS+ W+L
Sbjct: 396 LFSSSLDGSVRAWDL 410
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 50 AVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82
A+ ++ + S + +I+G DDG I +W++NS C
Sbjct: 341 ALSTLQYSSDGQRIITGADDGKIKVWDMNSGFC 373
>sp|Q5RFQ4|WDR72_PONAB WD repeat-containing protein 72 OS=Pongo abelii GN=WDR72 PE=2
SV=1
Length = 1098
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 15/82 (18%)
Query: 15 AVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSA--------------VRSISFCSKQ 60
++ +I Q +++G +G +C+WNL+ +L SA R+ F SKQ
Sbjct: 19 SITAIMITDDQRMIVTGSQEGQLCLWNLSHELKISAKELLFGHSASVTCLARARDF-SKQ 77
Query: 61 RTLISGGDDGSICMWNLNSKLC 82
++S ++G +C+WN+ + C
Sbjct: 78 PYIVSAAENGEMCVWNVTNGQC 99
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 36 SICMWNLNSKLCDSAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81
++ +W K ++ +I QR +++G +G +C+WNL+ +L
Sbjct: 7 AVALWG--QKAPPHSITAIMITDDQRMIVTGSQEGQLCLWNLSHEL 50
>sp|Q229Z6|POC1_TETTS POC1 centriolar protein homolog OS=Tetrahymena thermophila (strain
SB210) GN=TTHERM_01308010 PE=3 SV=1
Length = 634
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 15 AVRSISFCSKQHTLISGGDDGSICMWNLNSK--LCDSA-----VRSISFCSKQRTLISGG 67
A+RS+SF + L+S DD ++ +W L K +C A VRS R + SG
Sbjct: 133 AIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGS 192
Query: 68 DDGSICMWNLN 78
DD ++ +W+LN
Sbjct: 193 DDKTVMLWDLN 203
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 15 AVRSISFCSKQHTLISGGDDGSICMW-NLNSKLCD------SAVRSISFCSKQRTLISGG 67
AV + + T+ S G D I +W N C A+RS+SF + L+S
Sbjct: 91 AVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSS 150
Query: 68 DDGSICMWNLNSK 80
DD ++ +W L K
Sbjct: 151 DDKTLKLWRLQDK 163
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSA-------VRSISFCSK 59
T ++ + VRS+ FCS +L++ DD ++ +W+ + + + VR F
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPD 156
Query: 60 QRTLISGGDDGSICMWNLNSKLC 82
R ++S DD ++ +W+ S+ C
Sbjct: 157 GRLIVSASDDKTVKLWDKTSREC 179
>sp|Q54D08|LST8_DICDI Protein LST8 homolog OS=Dictyostelium discoideum GN=lst8 PE=1 SV=1
Length = 304
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 16 VRSISFCSKQHTLISGGDDGSICMWNLNSK------LCDSAVRSISFCSKQRTLISGGDD 69
V + F + + +G +DG++ +W+L + C + V ++ Q LISG +
Sbjct: 79 VTGVGFQKEGKWMYTGSEDGTVKIWDLKAPGCQRDYECSAPVNTVVLHPNQAELISGDQN 138
Query: 70 GSICMWNLNSKLCDR 84
GSI +W+L S C R
Sbjct: 139 GSIRVWDLISNTCSR 153
>sp|Q8BPN8|DMXL2_MOUSE DmX-like protein 2 OS=Mus musculus GN=Dmxl2 PE=1 SV=3
Length = 3032
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 3 SIIHTFV-HSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSI 54
S+IH F H + + V + + KQ LISGG G IC++++ + DSA++++
Sbjct: 2887 SLIHGFTCHDHGATV--LQYAPKQQLLISGGRKGYICIFDIRQRQLIHTFQAHDSAIKAL 2944
Query: 55 SFCSKQRTLISGGDDGSICMWNL 77
+ S + +G +G+I +W L
Sbjct: 2945 ALDSCEEYFTTGSAEGNIKVWRL 2967
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 12 NNSAVRSISFCSKQHTLISGG---DDGSICMWN---------LNSKLC-DSAVRSISFCS 58
++ A +F + + + G D+ ++C+W+ ++ C D + +
Sbjct: 2847 HSKATSDFAFITSSSLVATSGHSNDNRNVCLWDTLISPGNSLIHGFTCHDHGATVLQYAP 2906
Query: 59 KQRTLISGGDDGSICMWNLNSK 80
KQ+ LISGG G IC++++ +
Sbjct: 2907 KQQLLISGGRKGYICIFDIRQR 2928
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN-SKLCDSA------VRSISFCSK 59
T ++ + VRS+ FCS + ++ DD ++ +W+ + K S VR F
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPD 156
Query: 60 QRTLISGGDDGSICMWNLNSKLC 82
R ++S DD ++ +W+ S+ C
Sbjct: 157 GRLIVSASDDKTVKLWDKTSREC 179
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 28 LISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSK 80
L+SG D +I W++N +C D+ VR + F R L+S DD +I +W+L ++
Sbjct: 318 LVSGSRDRTIRFWDVNIGICLFVLIGHDNWVRQLVFHPHGRLLLSASDDKTIRVWDLKNR 377
Query: 81 LCDR 84
C +
Sbjct: 378 RCHK 381
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSI 54
G HT + + +V+ ++F L S D + +W+ C D V S+
Sbjct: 154 GEFEHT-LKGHTDSVQDVAFDPSGKFLASCSADMQVKLWDFTIYQCIKTLTGHDHNVSSV 212
Query: 55 SFCSKQRTLISGGDDGSICMWNLNSKLCDR 84
+F L+S D +I MW +++ C +
Sbjct: 213 AFLPSGDFLVSASRDKTIKMWEVSTGYCTK 242
>sp|Q8C4J7|TBL3_MOUSE Transducin beta-like protein 3 OS=Mus musculus GN=Tbl3 PE=2 SV=1
Length = 801
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 18 SISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDG 70
++ F L + DG+I +W L C D++V ++F S+ L+S G DG
Sbjct: 526 NVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDG 585
Query: 71 SICMWNLNSKLCDR 84
+ +W + S C R
Sbjct: 586 LLKLWTIKSNECVR 599
Score = 36.6 bits (83), Expect = 0.044, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 14/85 (16%)
Query: 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSAVRSIS----- 55
D S + TF ++++V ++F S+ L+S G DG + +W + S C VR++
Sbjct: 552 DFSCLKTF-EGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSNEC---VRTLDAHEDK 607
Query: 56 ----FCSK-QRTLISGGDDGSICMW 75
CS+ I+GG D I +W
Sbjct: 608 VWGLHCSQLDDHAITGGSDSRIILW 632
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNS 44
SAV S+SF HT++S G D +W+L S
Sbjct: 196 SAVTSLSFSEGGHTMLSSGRDKICIVWDLQS 226
>sp|Q5U2W5|TBL3_RAT Transducin beta-like protein 3 OS=Rattus norvegicus GN=Tbl3 PE=2
SV=1
Length = 800
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 18 SISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDG 70
++ F L + DG+I +W L C D++V ++F S+ L+S G DG
Sbjct: 526 NVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDG 585
Query: 71 SICMWNLNSKLCDR 84
+ +W + S C R
Sbjct: 586 LLKLWTIKSNECVR 599
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 14/85 (16%)
Query: 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSAVRSIS----- 55
D S + TF ++++V ++F S+ L+S G DG + +W + S C VR++
Sbjct: 552 DFSCLKTF-EGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSNEC---VRTLDAHEDK 607
Query: 56 ----FCSK-QRTLISGGDDGSICMW 75
CS+ I+GG D I +W
Sbjct: 608 VWGLHCSRLDDHAITGGSDSRIILW 632
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 28 LISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79
L S D SI +W+L + C SAV S+SF T++S G D +W+L S
Sbjct: 168 LFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLRS 226
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNS 44
SAV S+SF HT++S G D +W+L S
Sbjct: 196 SAVTSLSFSEDGHTMLSSGRDKICIVWDLRS 226
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN-SKLCDSA------VRSISFCSK 59
T ++ + VRS+ FCS + ++ DD ++ +W + K S VR F
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPD 156
Query: 60 QRTLISGGDDGSICMWNLNSKLC 82
R ++S DD ++ +W+ +S+ C
Sbjct: 157 GRLIVSASDDKTVKLWDKSSREC 179
>sp|Q5XX13|FBW10_HUMAN F-box/WD repeat-containing protein 10 OS=Homo sapiens GN=FBXW10
PE=2 SV=2
Length = 1052
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 15 AVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGG 67
+VR++ C +++ L+SG D SI W+L S +C + + C + L+SGG
Sbjct: 455 SVRALFLCEEENFLLSGSYDLSIRYWDLKSGVCTRIFGGHQGTITCMDLCKNR--LVSGG 512
Query: 68 DDGSICMWNLNSKLC 82
D + +W++++ C
Sbjct: 513 RDCQVKVWDVDTGKC 527
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 50 AVRSISFCSKQRTLISGGDDGSICMWNLNSKLCDR 84
+VR++ C ++ L+SG D SI W+L S +C R
Sbjct: 455 SVRALFLCEEENFLLSGSYDLSIRYWDLKSGVCTR 489
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSA-------VRSI 54
G +HTF + VR+++F L SG DD +I +W++ ++ + V S+
Sbjct: 658 GEALHTF-EGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSV 716
Query: 55 SFCSKQRTLISGGDDGSICMWNLNSK 80
+F + TL S +DG+I +W + ++
Sbjct: 717 AFHPEGTTLASASEDGTIRIWPIATE 742
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSA-------VRSI 54
G +HT + + VR+++F L SG DD ++ +W++ + + V I
Sbjct: 491 GDELHT-LEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDI 549
Query: 55 SFCSKQRTLISGGDDGSICMWNL 77
+F + SG DG+ +WN+
Sbjct: 550 AFSPDGSMVASGSRDGTARLWNV 572
>sp|Q17N69|LIS1_AEDAE Lissencephaly-1 homolog OS=Aedes aegypti GN=AAEL000770 PE=3 SV=2
Length = 409
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 28 LISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSK 80
L SG D +I +W++NS LC D+ VR I F + ++S DD ++ +W+L +K
Sbjct: 310 LASGSRDKTIRVWDVNSGLCLFTLVGHDNWVRGIVFHPGGKYMLSASDDKTLRIWDLRNK 369
Query: 81 LC 82
C
Sbjct: 370 RC 371
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSA-------VRSISFCSKQR 61
+H ++ V S+SF L+S D +I MW + + C VR +
Sbjct: 187 MHGHDHNVSSVSFVPAGDYLLSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRVNVDGS 246
Query: 62 TLISGGDDGSICMWNLNSKLC 82
+ S +D S+ +W NSK C
Sbjct: 247 LMASCSNDHSVRVWQTNSKEC 267
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSAVRSIS-FCS-- 58
G + T V +N VR I F ++S DD ++ +W+L +K C + + S FC+
Sbjct: 327 GLCLFTLVGHDN-WVRGIVFHPGGKYMLSASDDKTLRIWDLRNKRCMKTLYAHSHFCTSL 385
Query: 59 ----KQRTLISGGDDGSICMW 75
+ISG D ++ +W
Sbjct: 386 DMHKSHPYVISGSVDTTVKVW 406
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN-SKLCDSA------VRSISFCSK 59
T ++ VRS+SF +L++ DD +I +W ++ K S VR F
Sbjct: 96 TVFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPD 155
Query: 60 QRTLISGGDDGSICMWNLNSKLC 82
R ++S DD +I +W+ S+ C
Sbjct: 156 GRLIVSASDDKTIKLWDKTSREC 178
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNL-NSKLC------DSAVRSISF 56
I H VHS V S+SF + LI+ +D ++ + +L +L V S+ F
Sbjct: 221 IQHYQVHSG--VVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTSVKF 278
Query: 57 CSKQRTLISGGDDGSICMWNLN 78
+ SGG D + +W N
Sbjct: 279 SREGEFFASGGSDEQVMVWKTN 300
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSAVRSISFCSKQ 60
+G +++T +H + V S+ F + SGG D + +W N DSA + +Q
Sbjct: 259 EGRLLYT-LHGHQGPVTSVKFSREGEFFASGGSDEQVMVWKTN---FDSASYADLLKYRQ 314
Query: 61 R-TLISGGD 68
++GGD
Sbjct: 315 HDQFLNGGD 323
>sp|Q12788|TBL3_HUMAN Transducin beta-like protein 3 OS=Homo sapiens GN=TBL3 PE=1 SV=2
Length = 808
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 19 ISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGS 71
+ F L + DG+I +W L C D++V ++F S+ L+S G DG
Sbjct: 527 VQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGL 586
Query: 72 ICMWNLNSKLCDR 84
+ +W + + C R
Sbjct: 587 VKLWTIKNNECVR 599
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 17/86 (19%)
Query: 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNS-----------------KLCDSAVRSISF 56
SAV S++F + HT++S G D +W+L S L + V +
Sbjct: 196 SAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGV 255
Query: 57 CSKQRTLISGGDDGSICMWNLNSKLC 82
S ++ GD G++ +W S C
Sbjct: 256 KSPGLYFLTAGDQGTLRVWEAASGQC 281
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSAVRSIS----- 55
D S + TF ++++V ++F S+ L+S G DG + +W + + C VR++
Sbjct: 552 DFSCLKTF-EGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNEC---VRTLDAHEDK 607
Query: 56 ----FCSK-QRTLISGGDDGSICMW 75
CS+ ++G D + +W
Sbjct: 608 VWGLHCSRLDDHALTGASDSRVILW 632
>sp|Q6PNC0|DMXL1_MOUSE DmX-like protein 1 OS=Mus musculus GN=Dmxl1 PE=1 SV=1
Length = 3013
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSIS 55
S++H F ++S +++ K LISGG G C+++L + DS V++I+
Sbjct: 2863 SLVHAFT-CHDSGATVLAYAPKHQLLISGGRKGFTCIFDLRQRQQRQLFQSHDSPVKAIA 2921
Query: 56 FCSKQRTLISGGDDGSICMWNLNS 79
+ ++G +G+I +W+L+S
Sbjct: 2922 IDPTEEYFVTGSAEGNIKIWSLSS 2945
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 13/79 (16%)
Query: 12 NNSAVRSISFCSKQHTLISGG---DDGSICMWN---------LNSKLC-DSAVRSISFCS 58
+N F S + + G D+ +IC+W+ +++ C DS +++
Sbjct: 2823 HNKTANDFVFVSSSSLIATAGLSSDNRNICLWDTLVAPANSLVHAFTCHDSGATVLAYAP 2882
Query: 59 KQRTLISGGDDGSICMWNL 77
K + LISGG G C+++L
Sbjct: 2883 KHQLLISGGRKGFTCIFDL 2901
>sp|Q8TDJ6|DMXL2_HUMAN DmX-like protein 2 OS=Homo sapiens GN=DMXL2 PE=1 SV=2
Length = 3036
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 3 SIIHTFV-HSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSI 54
S+IH F H + + V + + KQ LISGG G +C++++ + DSA++++
Sbjct: 2891 SLIHGFTCHDHGATV--LQYAPKQQLLISGGRKGHVCIFDIRQRQLIHTFQAHDSAIKAL 2948
Query: 55 SFCSKQRTLISGGDDGSICMWNL 77
+ + +G +G+I +W L
Sbjct: 2949 ALDPYEEYFTTGSAEGNIKVWRL 2971
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 12 NNSAVRSISFCSKQHTLISGG---DDGSICMWN---------LNSKLC-DSAVRSISFCS 58
++ A +F + + + G D+ ++C+W+ ++ C D + +
Sbjct: 2851 HSKATSDFAFITSSSLVATSGHSNDNRNVCLWDTLISPGNSLIHGFTCHDHGATVLQYAP 2910
Query: 59 KQRTLISGGDDGSICMWNLNSK 80
KQ+ LISGG G +C++++ +
Sbjct: 2911 KQQLLISGGRKGHVCIFDIRQR 2932
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 1 DGSIIHTFV-HSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRS 53
DG ++HTF HSN V S SF + S +D ++ +W ++ L + V S
Sbjct: 1561 DGHLLHTFSGHSN--VVYSSSFSPDGRYIASASEDKTVKIWQIDGHLLTTLPQHQAGVMS 1618
Query: 54 ISFCSKQRTLISGGDDGSICMWNLNSK 80
F +TLISG D + +W +S+
Sbjct: 1619 AIFSPDGKTLISGSLDTTTKIWRFDSQ 1645
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRT 62
+ + V SIS T+ SG D +I +W+ + +L + AV S+SF +T
Sbjct: 1068 LEGHKDGVISISISRDGQTIASGSLDKTIKLWSRDGRLFRTLNGHEDAVYSVSFSPDGQT 1127
Query: 63 LISGGDDGSICMW 75
+ SGG D +I +W
Sbjct: 1128 IASGGSDKTIKLW 1140
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRS 53
DG + T ++ + AV S+SF T+ SGG D +I +W + + V +
Sbjct: 1102 DGRLFRT-LNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNN 1160
Query: 54 ISFCSKQRTLISGGDDGSICMWNLNS 79
+ F + L S D SI +W+ S
Sbjct: 1161 VYFSPDGKNLASASSDHSIKLWDTTS 1186
Score = 36.6 bits (83), Expect = 0.048, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRS 53
DGS++ T N A+ ISF + + S D ++ +W + D+ V
Sbjct: 1394 DGSLLKTL--PGNKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNK 1451
Query: 54 ISFCSKQRTLISGGDDGSICMWNLN 78
++F +TL S D ++ +WN++
Sbjct: 1452 VNFSPDGKTLASASRDNTVKLWNVS 1476
Score = 32.7 bits (73), Expect = 0.65, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWN------LNSKLCDSAVRSISFCSKQRT 62
V + NS V ++SF + + G DG+I +W+ L + + A+ ISF +
Sbjct: 1359 VLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIYGISFTPQGDL 1418
Query: 63 LISGGDDGSICMWNL 77
+ S D ++ +W +
Sbjct: 1419 IASANADKTVKIWRV 1433
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNL-NSKLCDSA------VRSI 54
G ++ T +++ V ++ F T+ +G +D ++ +W+ + KL + V S+
Sbjct: 1187 GQLLMTLT-GHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSL 1245
Query: 55 SFCSKQRTLISGGDDGSICMWNL 77
SF +TL S D +I +W +
Sbjct: 1246 SFSPDGKTLASASADKTIKLWRI 1268
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN-SKLCDSA------VRSISFCSK 59
T ++ VRS+SF +L++ DD +I +W ++ K S VR F
Sbjct: 96 TAFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPD 155
Query: 60 QRTLISGGDDGSICMWNLNSKLC 82
R ++S DD +I +W+ S+ C
Sbjct: 156 GRLIVSASDDKTIKLWDKTSREC 178
>sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup12 PE=1 SV=2
Length = 598
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGD 68
VRS++F L +G +D I +W++ K + + S+ F +TL+SG
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSG 408
Query: 69 DGSICMWNLNS 79
D ++C+W++ +
Sbjct: 409 DRTVCLWDVEA 419
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 5 IHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNS---KL---CDSAVRSISFCS 58
++ + + + S+ F TL+SG D ++C+W++ + KL D V ++ F
Sbjct: 380 VYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSP 439
Query: 59 KQRTLISGGDDGSICMWNLNSKLCDR 84
+ + +G D I +W + L ++
Sbjct: 440 DGQFIAAGSLDKVIRIWTSSGTLVEQ 465
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 19/90 (21%)
Query: 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN--SKLCDSAVRSISFCSKQRT---- 62
+H + +V S++F L+SG D +I +W L S + S + C + T
Sbjct: 466 LHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKD 525
Query: 63 -------------LISGGDDGSICMWNLNS 79
+ISG D +I W+ +S
Sbjct: 526 FILSVTVSPDGKWIISGSKDRTIQFWSPDS 555
>sp|Q6NWH1|DCA10_DANRE DDB1- and CUL4-associated factor 10 OS=Danio rerio GN=dcaf10 PE=2
SV=2
Length = 508
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 5 IHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNL---NSKLCD-----SAVRSISF 56
I T V ++ V +I F + + DD +I +W+L NSK+C S V++I +
Sbjct: 163 IKTLVEAHEDCVNNIRFLDNR-LFATCSDDTTIALWDLRKLNSKVCSLHGHASWVKNIEY 221
Query: 57 CSKQRTLISGGDDGSICMWNLN 78
+ R L++ G DG++ W+ N
Sbjct: 222 DTHTRLLVTSGFDGNVITWDTN 243
>sp|O35142|COPB2_RAT Coatomer subunit beta' OS=Rattus norvegicus GN=Copb2 PE=1 SV=3
Length = 905
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 16 VRSISFCSKQHTLISGGDDGSICMWNLNSK-------LCDSAVRSISFCSKQRTLISGGD 68
V+S+ + +++ +GS+C+WN ++ +CD VR+ F +++ +++G D
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGAD 77
Query: 69 DGSICMWNLNS 79
D I ++N N+
Sbjct: 78 DMQIRVFNYNT 88
Score = 32.3 bits (72), Expect = 0.78, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 28 LISGGDDGSICMWNLNSKLCDSA-------VRSISFCSKQRTLISGGDDGSICMWN 76
LISG DD + +W+ +K C V +F + +I+G +DG++ +W+
Sbjct: 202 LISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPELPIIITGSEDGTVRIWH 257
>sp|Q5R664|COPB2_PONAB Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1
Length = 906
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 16 VRSISFCSKQHTLISGGDDGSICMWNLNSK-------LCDSAVRSISFCSKQRTLISGGD 68
V+S+ + +++ +GS+C+WN ++ +CD VR+ F +++ +++G D
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGAD 77
Query: 69 DGSICMWNLNS 79
D I ++N N+
Sbjct: 78 DMQIRVFNYNT 88
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 28 LISGGDDGSICMWNLNSKLCDSA-------VRSISFCSKQRTLISGGDDGSICMWN 76
LISG DD + +W+ +K C V SF + +I+G +DG++ +W+
Sbjct: 202 LISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
>sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2
Length = 905
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 16 VRSISFCSKQHTLISGGDDGSICMWNLNSK-------LCDSAVRSISFCSKQRTLISGGD 68
V+S+ + +++ +GS+C+WN ++ +CD VR+ F +++ +++G D
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGAD 77
Query: 69 DGSICMWNLNS 79
D I ++N N+
Sbjct: 78 DMQIRVFNYNT 88
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 28 LISGGDDGSICMWNLNSKLCDSA-------VRSISFCSKQRTLISGGDDGSICMWN 76
LISG DD + +W+ +K C V SF + +I+G +DG++ +W+
Sbjct: 202 LISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
>sp|Q4R4I8|COPB2_MACFA Coatomer subunit beta' OS=Macaca fascicularis GN=COPB2 PE=2 SV=1
Length = 906
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 16 VRSISFCSKQHTLISGGDDGSICMWNLNSK-------LCDSAVRSISFCSKQRTLISGGD 68
V+S+ + +++ +GS+C+WN ++ +CD VR+ F +++ +++G D
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGAD 77
Query: 69 DGSICMWNLNS 79
D I ++N N+
Sbjct: 78 DMQIRVFNYNT 88
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 28 LISGGDDGSICMWNLNSKLCDSA-------VRSISFCSKQRTLISGGDDGSICMWN 76
LISG DD + +W+ +K C V SF + +I+G +DG++ +W+
Sbjct: 202 LISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
>sp|P35606|COPB2_HUMAN Coatomer subunit beta' OS=Homo sapiens GN=COPB2 PE=1 SV=2
Length = 906
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 16 VRSISFCSKQHTLISGGDDGSICMWNLNSK-------LCDSAVRSISFCSKQRTLISGGD 68
V+S+ + +++ +GS+C+WN ++ +CD VR+ F +++ +++G D
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGAD 77
Query: 69 DGSICMWNLNS 79
D I ++N N+
Sbjct: 78 DMQIRVFNYNT 88
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 28 LISGGDDGSICMWNLNSKLCDSA-------VRSISFCSKQRTLISGGDDGSICMWN 76
LISG DD + +W+ +K C V SF + +I+G +DG++ +W+
Sbjct: 202 LISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
>sp|P35605|COPB2_BOVIN Coatomer subunit beta' OS=Bos taurus GN=COPB2 PE=1 SV=3
Length = 906
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 16 VRSISFCSKQHTLISGGDDGSICMWNLNSK-------LCDSAVRSISFCSKQRTLISGGD 68
V+S+ + +++ +GS+C+WN ++ +CD VR+ F +++ +++G D
Sbjct: 18 VKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGAD 77
Query: 69 DGSICMWNLNS 79
D I ++N N+
Sbjct: 78 DMQIRVFNYNT 88
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 28 LISGGDDGSICMWNLNSKLCDSA-------VRSISFCSKQRTLISGGDDGSICMWN 76
LISG DD + +W+ +K C V SF + +I+G +DG++ +W+
Sbjct: 202 LISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
>sp|Q5SQE2|STB5L_DANRE Syntaxin-binding protein 5-like OS=Danio rerio GN=stxbp5l PE=3 SV=1
Length = 1159
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 28 LISGGDDGSICMWNLNSKLCD------SAVRSISFCSKQRTLISGGDDGSICMWNLNS 79
L+ G + G+I MW+L +K D A+ S+S+ + R + DGS+ MWN+ +
Sbjct: 225 LLIGFESGTIVMWDLRAKRADFRIYYDEAIHSVSWHHEGRQFMCSHSDGSLSMWNMRN 282
>sp|B3MEY6|LIS1_DROAN Lissencephaly-1 homolog OS=Drosophila ananassae GN=Lis-1 PE=3 SV=1
Length = 411
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 28 LISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSK 80
L SG D +I +W+++ LC D+ VR ++F + L+S DD +I +W+L +K
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLFTLNGHDNWVRGLAFHPAGKYLVSASDDKTIRVWDLRNK 371
Query: 81 LC 82
C
Sbjct: 372 RC 373
Score = 33.5 bits (75), Expect = 0.34, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSAV-------RSISFCSKQR 61
++ +++ VR ++F L+S DD +I +W+L +K C + SI F
Sbjct: 335 LNGHDNWVRGLAFHPAGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHP 394
Query: 62 TLISGGDDGSICMW 75
+ISG D ++ +W
Sbjct: 395 YVISGSVDQTVKVW 408
>sp|Q2KJJ5|TBL3_BOVIN Transducin beta-like protein 3 OS=Bos taurus GN=TBL3 PE=2 SV=1
Length = 800
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 19 ISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGS 71
+ F L + DG+I +W L C D++V ++F S+ L+S G DG
Sbjct: 527 VQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGL 586
Query: 72 ICMWNLNSKLCDR 84
+ +W + + C R
Sbjct: 587 LKLWTIKNNECVR 599
Score = 32.3 bits (72), Expect = 0.88, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSAVRSIS----- 55
D S + TF ++++V ++F S+ L+S G DG + +W + + C VR++
Sbjct: 552 DFSCLKTF-EGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNEC---VRTLDAHEDK 607
Query: 56 ----FCSK-QRTLISGGDDGSICMW 75
CS+ ++G D + +W
Sbjct: 608 VWGLHCSRLDDRALTGASDSRVVLW 632
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 17/86 (19%)
Query: 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNS-----------------KLCDSAVRSISF 56
SAV S++F + HT++S G D +W+L S L + +
Sbjct: 196 SAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPELGV 255
Query: 57 CSKQRTLISGGDDGSICMWNLNSKLC 82
S ++ GD G++ +W S C
Sbjct: 256 KSAGLHFLTAGDQGALRVWEAASGRC 281
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.132 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,491,681
Number of Sequences: 539616
Number of extensions: 973280
Number of successful extensions: 6907
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 536
Number of HSP's that attempted gapping in prelim test: 4441
Number of HSP's gapped (non-prelim): 2542
length of query: 84
length of database: 191,569,459
effective HSP length: 55
effective length of query: 29
effective length of database: 161,890,579
effective search space: 4694826791
effective search space used: 4694826791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)