Query psy16880
Match_columns 84
No_of_seqs 117 out of 1432
Neff 11.8
Searched_HMMs 46136
Date Sat Aug 17 00:28:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16880.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16880hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271|consensus 99.8 6.6E-20 1.4E-24 100.8 8.1 79 4-83 107-192 (480)
2 KOG0272|consensus 99.8 2.9E-18 6.3E-23 94.9 8.5 83 1-84 334-424 (459)
3 KOG0272|consensus 99.8 6.9E-19 1.5E-23 97.4 5.9 78 5-83 296-380 (459)
4 KOG0263|consensus 99.8 2.4E-18 5.2E-23 100.2 7.2 80 3-83 526-612 (707)
5 KOG0263|consensus 99.8 4E-17 8.7E-22 95.3 10.5 78 1-79 566-650 (707)
6 KOG0266|consensus 99.7 1.5E-16 3.3E-21 91.0 11.3 79 2-81 236-321 (456)
7 KOG0279|consensus 99.7 8.5E-17 1.8E-21 85.6 9.3 81 1-82 94-184 (315)
8 KOG0271|consensus 99.7 6.6E-17 1.4E-21 89.2 8.4 81 2-83 147-240 (480)
9 KOG0286|consensus 99.7 3.2E-16 6.9E-21 84.0 9.5 82 1-83 175-264 (343)
10 KOG0315|consensus 99.7 4.5E-16 9.8E-21 82.1 9.5 79 3-82 74-158 (311)
11 PTZ00421 coronin; Provisional 99.7 8.4E-16 1.8E-20 88.6 11.0 80 3-83 116-203 (493)
12 KOG0266|consensus 99.7 7.3E-16 1.6E-20 88.3 9.7 79 4-83 195-281 (456)
13 KOG0273|consensus 99.7 6E-16 1.3E-20 87.0 9.0 80 3-83 350-487 (524)
14 KOG0279|consensus 99.7 6.1E-16 1.3E-20 82.4 8.6 79 2-81 53-138 (315)
15 KOG0318|consensus 99.7 1.3E-15 2.8E-20 86.7 9.6 76 7-83 185-270 (603)
16 KOG0315|consensus 99.7 1.1E-15 2.5E-20 80.6 8.6 81 1-83 29-118 (311)
17 KOG0282|consensus 99.7 7.4E-17 1.6E-21 90.6 4.3 82 1-83 247-335 (503)
18 KOG0295|consensus 99.6 2.3E-15 5E-20 82.5 8.0 81 3-84 268-370 (406)
19 PTZ00420 coronin; Provisional 99.6 1.5E-14 3.3E-19 84.4 11.2 78 5-83 118-202 (568)
20 KOG0286|consensus 99.6 9.2E-15 2E-19 78.5 9.3 80 1-81 218-306 (343)
21 KOG0265|consensus 99.6 7.8E-15 1.7E-19 78.9 8.8 80 4-84 39-126 (338)
22 KOG0291|consensus 99.6 6.1E-15 1.3E-19 86.9 9.0 81 1-82 467-554 (893)
23 KOG0275|consensus 99.6 5E-16 1.1E-20 84.8 4.1 72 13-84 213-299 (508)
24 KOG0284|consensus 99.6 1.1E-15 2.4E-20 84.8 4.7 77 7-83 174-257 (464)
25 KOG0283|consensus 99.6 2.9E-15 6.3E-20 88.0 6.5 80 2-83 359-445 (712)
26 PTZ00421 coronin; Provisional 99.6 3.8E-14 8.2E-19 81.9 11.0 75 7-82 70-160 (493)
27 PTZ00420 coronin; Provisional 99.6 7.8E-14 1.7E-18 81.6 12.2 78 4-82 66-160 (568)
28 KOG1407|consensus 99.6 7.3E-15 1.6E-19 78.0 7.0 80 3-83 180-266 (313)
29 KOG0291|consensus 99.6 2.6E-14 5.5E-19 84.3 9.4 78 4-82 342-426 (893)
30 KOG0285|consensus 99.6 1E-14 2.2E-19 80.3 6.6 79 3-82 226-311 (460)
31 KOG0292|consensus 99.6 1E-14 2.2E-19 87.4 6.9 81 2-83 41-128 (1202)
32 KOG0285|consensus 99.6 1.6E-14 3.5E-19 79.5 6.9 80 4-84 143-229 (460)
33 KOG0645|consensus 99.6 9.1E-14 2E-18 74.1 9.5 75 3-78 96-180 (312)
34 KOG0316|consensus 99.6 5.1E-14 1.1E-18 74.1 8.2 82 1-83 90-218 (307)
35 KOG0264|consensus 99.6 7.1E-14 1.5E-18 78.0 9.1 74 4-78 264-347 (422)
36 KOG0284|consensus 99.6 1.6E-14 3.5E-19 80.3 6.4 78 4-82 214-298 (464)
37 KOG1273|consensus 99.6 6.6E-14 1.4E-18 76.2 8.0 68 16-83 26-100 (405)
38 KOG4283|consensus 99.5 7.7E-14 1.7E-18 75.4 7.3 80 1-81 177-279 (397)
39 KOG0643|consensus 99.5 4.7E-13 1E-17 71.5 10.0 80 1-81 41-180 (327)
40 KOG0647|consensus 99.5 1.9E-13 4.1E-18 73.8 8.6 71 13-83 72-150 (347)
41 KOG0283|consensus 99.5 1.8E-13 3.8E-18 80.8 9.2 78 3-82 401-485 (712)
42 KOG0276|consensus 99.5 9E-14 2E-18 80.9 7.7 80 3-83 131-220 (794)
43 KOG0316|consensus 99.5 1.9E-13 4E-18 72.0 8.1 79 1-80 48-133 (307)
44 KOG0295|consensus 99.5 3.6E-13 7.8E-18 74.2 9.3 77 1-78 323-406 (406)
45 KOG0319|consensus 99.5 2.6E-13 5.7E-18 79.8 9.3 81 2-83 495-582 (775)
46 KOG0273|consensus 99.5 2.1E-13 4.6E-18 77.0 8.4 80 2-82 266-393 (524)
47 KOG1446|consensus 99.5 4.9E-13 1.1E-17 72.2 9.4 78 2-80 90-172 (311)
48 KOG0318|consensus 99.5 9.5E-13 2.1E-17 75.3 10.8 81 1-82 221-354 (603)
49 PLN00181 protein SPA1-RELATED; 99.5 1.1E-12 2.4E-17 79.4 11.8 79 2-81 565-651 (793)
50 KOG0276|consensus 99.5 1.7E-13 3.7E-18 79.8 7.8 77 4-81 175-260 (794)
51 KOG2394|consensus 99.5 2.2E-13 4.7E-18 78.1 7.7 71 13-83 290-367 (636)
52 KOG0282|consensus 99.5 2.7E-14 6E-19 80.5 3.9 80 3-83 205-293 (503)
53 KOG0302|consensus 99.5 1.4E-13 3E-18 76.2 6.5 73 8-81 253-335 (440)
54 KOG0269|consensus 99.5 2.6E-13 5.7E-18 80.2 7.8 74 7-81 171-253 (839)
55 cd00200 WD40 WD40 domain, foun 99.5 8.5E-13 1.9E-17 70.0 9.1 76 5-81 2-84 (289)
56 KOG0277|consensus 99.5 1.1E-12 2.4E-17 69.7 9.0 79 2-81 137-224 (311)
57 KOG1274|consensus 99.5 9.4E-13 2E-17 78.9 9.6 75 4-79 130-263 (933)
58 KOG1034|consensus 99.5 2.3E-13 5E-18 74.2 6.4 78 2-80 125-213 (385)
59 KOG1539|consensus 99.5 2.6E-13 5.6E-18 80.7 7.0 75 2-77 566-647 (910)
60 KOG0264|consensus 99.5 5E-13 1.1E-17 74.8 7.7 77 4-81 219-306 (422)
61 KOG0973|consensus 99.5 7.5E-13 1.6E-17 80.0 8.5 79 4-83 61-164 (942)
62 KOG0640|consensus 99.5 8E-13 1.7E-17 72.1 7.8 79 4-83 164-251 (430)
63 KOG0293|consensus 99.5 1.1E-12 2.3E-17 73.6 8.3 76 3-79 260-343 (519)
64 KOG0275|consensus 99.5 1.1E-13 2.3E-18 75.9 4.4 83 1-83 294-383 (508)
65 KOG0313|consensus 99.5 1.3E-12 2.9E-17 72.3 8.4 78 2-81 250-333 (423)
66 KOG0645|consensus 99.5 4.1E-12 8.8E-17 68.0 9.9 74 4-78 6-91 (312)
67 KOG0265|consensus 99.5 7.1E-13 1.5E-17 71.6 7.1 81 1-82 121-208 (338)
68 KOG0278|consensus 99.5 1.5E-12 3.2E-17 69.3 8.0 34 48-81 267-300 (334)
69 cd00200 WD40 WD40 domain, foun 99.4 1.2E-11 2.7E-16 65.6 11.3 80 2-82 125-211 (289)
70 PF00400 WD40: WD domain, G-be 99.4 1E-12 2.2E-17 51.7 5.4 39 2-41 1-39 (39)
71 KOG0319|consensus 99.4 9.8E-13 2.1E-17 77.4 7.4 75 9-84 460-541 (775)
72 KOG0647|consensus 99.4 2.4E-12 5.3E-17 69.6 8.3 70 13-82 27-106 (347)
73 KOG0289|consensus 99.4 2.2E-12 4.7E-17 72.6 8.3 67 15-81 349-422 (506)
74 KOG0772|consensus 99.4 3.8E-13 8.2E-18 77.0 5.1 67 15-81 319-397 (641)
75 KOG0640|consensus 99.4 2.2E-12 4.8E-17 70.4 7.7 73 10-83 259-340 (430)
76 KOG0313|consensus 99.4 1.5E-12 3.3E-17 72.1 7.1 78 2-81 291-379 (423)
77 KOG0641|consensus 99.4 6E-12 1.3E-16 66.4 8.9 81 1-83 172-266 (350)
78 KOG1446|consensus 99.4 7.2E-12 1.6E-16 67.8 9.2 77 6-83 8-135 (311)
79 KOG0302|consensus 99.4 5E-12 1.1E-16 70.2 8.8 69 9-78 299-378 (440)
80 KOG0292|consensus 99.4 2.9E-12 6.2E-17 77.3 8.3 77 6-83 200-285 (1202)
81 KOG0296|consensus 99.4 8.8E-12 1.9E-16 68.8 9.4 79 4-83 140-225 (399)
82 PF08662 eIF2A: Eukaryotic tra 99.4 1.7E-11 3.8E-16 63.7 10.1 71 13-83 59-138 (194)
83 KOG0643|consensus 99.4 5.5E-12 1.2E-16 67.5 8.2 81 3-84 138-226 (327)
84 KOG1539|consensus 99.4 1.1E-11 2.4E-16 74.1 9.9 81 2-83 480-611 (910)
85 KOG2110|consensus 99.4 1.6E-11 3.4E-16 67.9 9.8 76 3-79 164-249 (391)
86 KOG0296|consensus 99.4 2.3E-11 5E-16 67.2 10.4 78 1-79 95-179 (399)
87 KOG0268|consensus 99.4 1.7E-12 3.7E-17 71.7 6.1 77 3-80 263-347 (433)
88 KOG0305|consensus 99.4 4.4E-12 9.6E-17 72.8 7.9 75 8-83 297-381 (484)
89 KOG2111|consensus 99.4 1.7E-11 3.8E-16 66.7 9.5 72 7-79 176-257 (346)
90 KOG0310|consensus 99.4 1.8E-12 3.9E-17 73.3 6.0 75 5-80 103-186 (487)
91 KOG0303|consensus 99.4 4.2E-12 9E-17 70.9 7.1 80 3-83 122-208 (472)
92 KOG0646|consensus 99.4 1.8E-12 3.8E-17 73.1 5.6 42 1-43 112-153 (476)
93 KOG1445|consensus 99.4 1.5E-12 3.3E-17 76.5 5.2 77 4-81 669-753 (1012)
94 KOG0310|consensus 99.4 2.5E-11 5.4E-16 68.9 9.7 74 5-80 146-227 (487)
95 KOG1310|consensus 99.4 5.5E-12 1.2E-16 73.0 7.1 74 5-79 43-126 (758)
96 KOG0281|consensus 99.4 4.1E-12 9E-17 70.3 6.3 41 4-47 229-269 (499)
97 KOG0973|consensus 99.4 1E-11 2.2E-16 75.3 8.3 75 4-79 121-202 (942)
98 KOG0281|consensus 99.3 2.2E-12 4.9E-17 71.3 4.7 76 1-81 349-431 (499)
99 KOG1273|consensus 99.3 1E-11 2.3E-16 67.8 7.0 77 6-83 59-188 (405)
100 KOG0772|consensus 99.3 3.9E-12 8.4E-17 73.0 5.6 70 9-79 265-348 (641)
101 PLN00181 protein SPA1-RELATED; 99.3 5.3E-11 1.2E-15 72.3 10.7 74 3-77 699-792 (793)
102 KOG0277|consensus 99.3 8.5E-12 1.8E-16 66.4 6.4 76 3-79 95-179 (311)
103 PF08662 eIF2A: Eukaryotic tra 99.3 1.2E-10 2.7E-15 60.6 10.4 69 13-81 100-182 (194)
104 KOG0267|consensus 99.3 2.7E-12 5.9E-17 75.7 4.5 81 2-83 102-189 (825)
105 KOG0293|consensus 99.3 1.4E-11 3.1E-16 69.2 6.8 77 6-83 218-304 (519)
106 KOG0305|consensus 99.3 4.5E-11 9.8E-16 68.8 9.0 76 5-81 210-334 (484)
107 KOG0274|consensus 99.3 3.4E-11 7.4E-16 70.4 8.5 79 1-83 320-406 (537)
108 KOG0274|consensus 99.3 8.3E-11 1.8E-15 68.9 9.9 79 1-84 280-365 (537)
109 KOG0269|consensus 99.3 9E-12 1.9E-16 74.0 5.9 76 5-81 213-299 (839)
110 KOG0300|consensus 99.3 2.1E-11 4.6E-16 66.9 6.8 79 1-81 303-389 (481)
111 KOG0294|consensus 99.3 8.3E-11 1.8E-15 64.2 8.4 77 4-83 35-120 (362)
112 KOG1063|consensus 99.3 3.7E-11 8.1E-16 70.8 7.4 74 6-80 566-650 (764)
113 KOG0308|consensus 99.3 7.6E-11 1.6E-15 69.2 8.4 73 10-83 169-248 (735)
114 KOG1188|consensus 99.3 6.4E-11 1.4E-15 65.1 7.6 78 1-79 59-197 (376)
115 KOG0288|consensus 99.3 1.6E-10 3.4E-15 64.9 9.0 79 3-83 333-422 (459)
116 KOG2048|consensus 99.2 2.8E-10 6.1E-15 66.9 9.9 81 2-83 100-189 (691)
117 KOG1009|consensus 99.2 1.1E-10 2.3E-15 65.4 7.7 78 5-83 58-158 (434)
118 KOG0289|consensus 99.2 1.8E-10 3.9E-15 65.1 8.5 73 8-81 299-380 (506)
119 KOG1407|consensus 99.2 2.2E-10 4.7E-15 61.4 8.3 80 1-82 96-223 (313)
120 KOG0278|consensus 99.2 1E-11 2.3E-16 66.1 3.3 80 2-83 91-178 (334)
121 KOG0294|consensus 99.2 1.1E-10 2.4E-15 63.7 7.1 73 8-81 79-160 (362)
122 KOG1272|consensus 99.2 2.9E-11 6.3E-16 68.7 5.0 80 2-82 241-327 (545)
123 KOG0303|consensus 99.2 3.4E-11 7.3E-16 67.4 5.0 74 8-82 77-166 (472)
124 KOG0642|consensus 99.2 4.4E-10 9.6E-15 65.0 9.2 77 3-81 335-429 (577)
125 KOG0300|consensus 99.2 7.1E-11 1.5E-15 64.9 5.7 83 1-84 179-308 (481)
126 KOG4283|consensus 99.2 2.3E-10 4.9E-15 62.4 7.5 67 13-79 101-220 (397)
127 KOG2096|consensus 99.2 2.5E-10 5.3E-15 62.8 7.6 69 6-75 80-160 (420)
128 KOG0290|consensus 99.2 7.6E-10 1.6E-14 60.2 9.2 73 7-80 191-320 (364)
129 KOG0641|consensus 99.2 5.2E-10 1.1E-14 59.2 8.3 66 14-79 232-304 (350)
130 KOG1332|consensus 99.2 1.1E-09 2.4E-14 58.3 9.0 77 3-80 47-136 (299)
131 KOG0306|consensus 99.2 5.2E-10 1.1E-14 66.8 8.5 77 4-81 542-625 (888)
132 KOG0639|consensus 99.2 1.2E-10 2.6E-15 67.1 5.7 78 3-81 542-666 (705)
133 KOG1036|consensus 99.2 8.8E-10 1.9E-14 60.0 8.7 67 13-80 54-126 (323)
134 KOG0306|consensus 99.2 5.5E-10 1.2E-14 66.7 8.5 70 13-82 508-584 (888)
135 KOG0267|consensus 99.2 2.7E-11 5.8E-16 71.7 3.0 75 7-82 65-146 (825)
136 KOG2919|consensus 99.1 1.2E-09 2.6E-14 60.2 8.6 77 2-79 240-328 (406)
137 KOG0308|consensus 99.1 1.5E-09 3.2E-14 64.0 9.2 77 2-79 203-286 (735)
138 KOG0307|consensus 99.1 5.4E-11 1.2E-15 72.8 3.4 77 5-82 109-196 (1049)
139 KOG2096|consensus 99.1 8.1E-10 1.8E-14 60.8 7.6 76 2-78 218-308 (420)
140 KOG0299|consensus 99.1 9.5E-10 2.1E-14 62.4 8.0 69 10-79 200-275 (479)
141 KOG0646|consensus 99.1 1.1E-09 2.4E-14 62.2 7.9 66 13-78 81-153 (476)
142 KOG0771|consensus 99.1 9.3E-10 2E-14 61.7 7.3 65 17-82 148-219 (398)
143 KOG0649|consensus 99.1 3.2E-09 6.9E-14 56.7 8.9 79 1-83 145-240 (325)
144 KOG2445|consensus 99.1 2.5E-09 5.5E-14 58.5 8.5 71 7-77 7-90 (361)
145 KOG0322|consensus 99.1 7.5E-10 1.6E-14 59.5 6.3 63 15-77 253-322 (323)
146 KOG0270|consensus 99.1 2.8E-10 6.2E-15 64.2 4.9 70 9-79 240-318 (463)
147 KOG0639|consensus 99.1 6.2E-10 1.3E-14 64.3 6.2 71 13-83 465-544 (705)
148 KOG0268|consensus 99.1 1.1E-09 2.5E-14 60.9 6.9 76 4-80 179-304 (433)
149 KOG0301|consensus 99.1 1.3E-09 2.8E-14 64.5 7.4 75 2-78 169-249 (745)
150 KOG1036|consensus 99.1 6.7E-09 1.5E-13 56.6 9.5 72 7-81 89-166 (323)
151 KOG0288|consensus 99.1 8.6E-10 1.9E-14 62.1 6.0 61 15-75 389-458 (459)
152 KOG4328|consensus 99.1 9.1E-10 2E-14 62.6 6.1 73 5-78 315-399 (498)
153 PF11768 DUF3312: Protein of u 99.1 4.7E-09 1E-13 61.2 9.0 66 13-78 259-329 (545)
154 KOG3881|consensus 99.1 2.6E-09 5.6E-14 59.8 7.7 80 3-83 238-325 (412)
155 KOG0321|consensus 99.1 6.1E-10 1.3E-14 65.4 5.4 71 9-80 97-177 (720)
156 KOG0270|consensus 99.1 7.2E-09 1.5E-13 58.8 9.4 79 1-80 275-362 (463)
157 KOG1538|consensus 99.0 3.2E-09 7E-14 63.4 8.0 76 1-77 42-161 (1081)
158 KOG0299|consensus 99.0 5.1E-09 1.1E-13 59.6 8.4 78 6-84 136-238 (479)
159 KOG0649|consensus 99.0 3E-09 6.5E-14 56.8 7.1 70 14-83 115-191 (325)
160 KOG2055|consensus 99.0 3.3E-09 7.1E-14 60.5 7.6 76 2-79 335-418 (514)
161 KOG0321|consensus 99.0 2.3E-09 5E-14 63.1 6.8 73 8-82 140-252 (720)
162 KOG2048|consensus 99.0 7.6E-09 1.7E-13 61.1 8.8 69 13-82 154-237 (691)
163 KOG0280|consensus 99.0 7E-09 1.5E-13 56.5 8.0 74 6-80 159-243 (339)
164 KOG2321|consensus 99.0 5E-09 1.1E-13 61.3 7.9 81 2-83 165-263 (703)
165 KOG3914|consensus 99.0 3.4E-09 7.3E-14 59.3 6.8 75 8-84 147-229 (390)
166 KOG4227|consensus 99.0 9.9E-09 2.1E-13 58.1 8.5 79 3-81 95-182 (609)
167 KOG1188|consensus 99.0 1.2E-08 2.6E-13 56.4 8.5 73 9-82 162-246 (376)
168 TIGR03866 PQQ_ABC_repeats PQQ- 99.0 4.5E-08 9.7E-13 53.1 10.5 79 2-82 21-107 (300)
169 KOG0650|consensus 99.0 1.9E-08 4.1E-13 59.3 8.8 72 4-76 392-470 (733)
170 KOG2055|consensus 98.9 1.6E-08 3.4E-13 57.8 8.2 71 13-83 213-293 (514)
171 PF02239 Cytochrom_D1: Cytochr 98.9 5.1E-08 1.1E-12 55.3 9.9 81 2-83 26-113 (369)
172 KOG1332|consensus 98.9 5.6E-09 1.2E-13 55.7 5.6 76 6-81 4-91 (299)
173 KOG0301|consensus 98.9 2.9E-08 6.3E-13 59.0 9.0 76 1-78 208-288 (745)
174 KOG1274|consensus 98.9 3.6E-08 7.9E-13 60.1 8.8 71 13-83 96-173 (933)
175 TIGR03866 PQQ_ABC_repeats PQQ- 98.9 1E-07 2.2E-12 51.7 9.8 67 17-83 210-284 (300)
176 KOG2106|consensus 98.9 8.6E-08 1.9E-12 55.7 9.6 66 13-79 407-478 (626)
177 KOG4378|consensus 98.9 3.6E-08 7.8E-13 57.2 7.7 66 16-81 167-242 (673)
178 KOG2110|consensus 98.9 1E-07 2.2E-12 53.3 9.0 71 13-83 129-209 (391)
179 KOG0974|consensus 98.9 7.3E-08 1.6E-12 59.3 9.2 70 7-79 170-247 (967)
180 PF00400 WD40: WD domain, G-be 98.8 1.9E-08 4.1E-13 39.3 4.7 29 48-76 11-39 (39)
181 KOG0290|consensus 98.8 5.1E-08 1.1E-12 53.3 7.6 70 3-74 278-361 (364)
182 KOG1524|consensus 98.8 5.4E-09 1.2E-13 61.0 4.2 77 2-79 94-217 (737)
183 KOG2106|consensus 98.8 1.9E-07 4.1E-12 54.3 9.9 66 13-78 447-521 (626)
184 KOG0771|consensus 98.8 4.6E-08 1E-12 55.1 7.2 72 10-83 184-316 (398)
185 COG2319 FOG: WD40 repeat [Gene 98.8 4.7E-07 1E-11 50.2 11.3 79 3-82 146-233 (466)
186 KOG0642|consensus 98.8 1.3E-08 2.8E-13 59.2 5.1 71 7-78 289-374 (577)
187 KOG1240|consensus 98.8 8.6E-08 1.9E-12 60.3 8.8 77 1-78 1037-1128(1431)
188 KOG2139|consensus 98.8 1.4E-07 3E-12 53.0 8.6 65 13-77 195-267 (445)
189 KOG1007|consensus 98.8 3.9E-08 8.5E-13 53.7 6.3 65 13-77 214-288 (370)
190 KOG1009|consensus 98.8 8.6E-08 1.9E-12 54.1 7.7 69 10-78 10-95 (434)
191 KOG4227|consensus 98.8 3.1E-08 6.7E-13 56.2 5.8 76 7-83 51-140 (609)
192 KOG1445|consensus 98.8 6.2E-09 1.4E-13 61.9 3.2 69 13-81 627-711 (1012)
193 KOG1523|consensus 98.8 9.3E-08 2E-12 52.7 7.4 74 4-78 47-130 (361)
194 KOG4378|consensus 98.8 6.1E-08 1.3E-12 56.3 6.9 72 9-81 205-283 (673)
195 KOG4328|consensus 98.8 1.3E-07 2.8E-12 54.2 7.7 73 7-80 181-267 (498)
196 KOG1587|consensus 98.8 3.3E-07 7.2E-12 54.3 9.7 67 13-79 242-324 (555)
197 smart00320 WD40 WD40 repeats. 98.8 1E-07 2.2E-12 36.0 5.5 39 2-41 2-40 (40)
198 KOG1034|consensus 98.8 3.3E-08 7.2E-13 54.7 5.2 37 8-45 177-213 (385)
199 KOG1409|consensus 98.7 8.4E-08 1.8E-12 53.4 6.5 77 4-81 189-273 (404)
200 KOG1524|consensus 98.7 1.5E-07 3.2E-12 55.2 7.0 38 9-47 183-220 (737)
201 KOG0644|consensus 98.7 1.8E-08 3.8E-13 61.4 3.1 76 7-83 185-267 (1113)
202 KOG1063|consensus 98.7 9.1E-08 2E-12 57.1 5.7 76 3-79 182-298 (764)
203 KOG2394|consensus 98.7 1.9E-07 4.2E-12 54.6 6.9 69 13-81 219-323 (636)
204 KOG1007|consensus 98.7 1.7E-07 3.6E-12 51.4 6.2 34 48-81 214-248 (370)
205 KOG1587|consensus 98.7 1.6E-07 3.4E-12 55.6 6.3 75 4-79 433-517 (555)
206 KOG1272|consensus 98.6 5.5E-08 1.2E-12 55.9 4.2 68 5-75 286-359 (545)
207 KOG2445|consensus 98.6 1.5E-06 3.3E-11 48.0 9.4 71 8-79 55-145 (361)
208 KOG0322|consensus 98.6 1.6E-07 3.5E-12 50.8 5.4 75 8-83 201-286 (323)
209 KOG4547|consensus 98.6 1.1E-06 2.3E-11 51.6 9.0 80 2-83 90-177 (541)
210 KOG0644|consensus 98.6 2E-08 4.4E-13 61.1 2.3 73 1-78 221-300 (1113)
211 KOG1963|consensus 98.6 7E-07 1.5E-11 54.3 8.4 68 13-80 251-324 (792)
212 KOG0307|consensus 98.6 5.3E-08 1.1E-12 60.3 3.8 77 3-80 244-329 (1049)
213 KOG1310|consensus 98.6 4.7E-07 1E-11 53.4 7.3 77 3-79 83-179 (758)
214 KOG1538|consensus 98.6 4.5E-07 9.8E-12 54.7 7.3 65 13-78 12-83 (1081)
215 KOG1408|consensus 98.6 1.1E-06 2.3E-11 53.5 8.8 78 1-78 627-713 (1080)
216 PRK01742 tolB translocation pr 98.6 1.1E-06 2.5E-11 50.7 8.8 75 6-81 197-283 (429)
217 KOG1523|consensus 98.6 7.2E-07 1.6E-11 49.4 7.5 64 13-76 100-174 (361)
218 COG4946 Uncharacterized protei 98.6 5.6E-06 1.2E-10 48.4 11.0 77 5-82 394-481 (668)
219 KOG1963|consensus 98.6 7.5E-07 1.6E-11 54.2 7.8 69 13-81 205-284 (792)
220 KOG1408|consensus 98.6 1.2E-06 2.6E-11 53.2 8.6 71 13-83 596-676 (1080)
221 KOG2919|consensus 98.6 9.6E-07 2.1E-11 49.1 7.4 69 13-81 207-284 (406)
222 KOG0650|consensus 98.6 1.3E-07 2.9E-12 55.9 4.2 72 3-75 641-732 (733)
223 KOG4714|consensus 98.5 2.5E-07 5.3E-12 50.1 4.6 66 14-79 180-255 (319)
224 KOG2315|consensus 98.5 9.5E-06 2.1E-10 47.8 9.7 77 2-81 303-393 (566)
225 PRK05137 tolB translocation pr 98.4 8E-06 1.7E-10 47.4 9.5 75 6-81 195-281 (435)
226 COG2319 FOG: WD40 repeat [Gene 98.4 3E-05 6.4E-10 43.1 10.5 77 3-81 189-274 (466)
227 KOG2315|consensus 98.3 1.8E-05 3.9E-10 46.7 8.8 71 13-83 270-349 (566)
228 PRK03629 tolB translocation pr 98.3 3.3E-05 7.1E-10 44.9 9.9 70 13-82 198-279 (429)
229 PRK04922 tolB translocation pr 98.3 1.4E-05 3E-10 46.4 8.3 74 7-81 198-283 (433)
230 PRK02889 tolB translocation pr 98.3 1.6E-05 3.4E-10 46.1 8.3 69 7-76 190-268 (427)
231 KOG3881|consensus 98.3 1E-05 2.2E-10 45.9 7.1 68 16-83 205-282 (412)
232 PRK11028 6-phosphogluconolacto 98.3 3.9E-05 8.4E-10 42.9 9.4 63 16-78 128-205 (330)
233 PRK00178 tolB translocation pr 98.2 5.4E-05 1.2E-09 43.8 9.8 69 13-81 198-278 (430)
234 PF12894 Apc4_WD40: Anaphase-p 98.2 1.2E-05 2.5E-10 32.8 5.1 28 50-77 13-40 (47)
235 KOG1517|consensus 98.2 3.7E-05 7.9E-10 48.8 8.7 66 14-79 1209-1288(1387)
236 KOG1517|consensus 98.2 3.3E-05 7.1E-10 49.0 8.3 75 4-80 1246-1335(1387)
237 KOG2139|consensus 98.2 4.2E-05 9.1E-10 43.5 8.1 70 13-83 140-231 (445)
238 KOG4532|consensus 98.2 4.9E-05 1.1E-09 41.7 8.1 66 16-81 161-236 (344)
239 KOG1064|consensus 98.2 4.2E-06 9.2E-11 55.2 4.6 70 9-82 2333-2402(2439)
240 PRK11028 6-phosphogluconolacto 98.2 0.00019 4.2E-09 40.2 10.6 65 15-79 81-157 (330)
241 KOG2111|consensus 98.1 7.4E-05 1.6E-09 41.7 8.4 58 26-83 149-217 (346)
242 KOG1064|consensus 98.1 9.7E-06 2.1E-10 53.6 5.5 36 48-83 2336-2371(2439)
243 KOG2695|consensus 98.1 2.6E-06 5.7E-11 47.8 2.4 70 13-82 252-333 (425)
244 PF02239 Cytochrom_D1: Cytochr 98.1 0.0001 2.2E-09 42.2 8.7 79 3-83 260-352 (369)
245 TIGR02800 propeller_TolB tol-p 98.1 0.00012 2.6E-09 42.1 9.0 69 13-81 189-269 (417)
246 KOG4497|consensus 98.1 3.4E-05 7.3E-10 43.5 6.4 51 13-63 91-148 (447)
247 KOG4532|consensus 98.0 0.00044 9.6E-09 38.2 9.7 68 14-81 204-285 (344)
248 KOG2695|consensus 98.0 1.6E-05 3.4E-10 44.9 4.3 71 13-83 298-381 (425)
249 smart00320 WD40 WD40 repeats. 98.0 3.5E-05 7.5E-10 28.5 4.2 29 48-76 12-40 (40)
250 KOG1240|consensus 98.0 0.00043 9.3E-09 44.8 10.4 70 13-82 1098-1229(1431)
251 KOG1409|consensus 98.0 1.7E-05 3.6E-10 44.7 4.0 41 6-47 234-274 (404)
252 PF15492 Nbas_N: Neuroblastoma 98.0 0.00058 1.3E-08 37.7 10.3 70 13-82 147-263 (282)
253 KOG1334|consensus 98.0 1.5E-05 3.2E-10 46.6 3.8 71 8-79 387-467 (559)
254 KOG4190|consensus 98.0 1.4E-05 3E-10 47.8 3.7 72 5-79 728-813 (1034)
255 KOG4640|consensus 98.0 0.00011 2.4E-09 44.2 7.3 69 14-82 21-96 (665)
256 PF12894 Apc4_WD40: Anaphase-p 97.9 9E-05 1.9E-09 30.2 5.0 31 13-43 11-41 (47)
257 KOG0974|consensus 97.9 5.6E-05 1.2E-09 47.3 6.2 68 10-80 216-290 (967)
258 PRK01742 tolB translocation pr 97.9 0.00016 3.6E-09 42.0 7.8 72 7-81 286-364 (429)
259 PRK04792 tolB translocation pr 97.9 0.00029 6.2E-09 41.4 8.5 69 13-81 217-297 (448)
260 KOG1334|consensus 97.9 5.3E-05 1.2E-09 44.4 5.3 41 6-47 136-176 (559)
261 KOG1645|consensus 97.9 6.5E-05 1.4E-09 43.1 5.6 72 9-81 190-269 (463)
262 PRK02889 tolB translocation pr 97.9 0.00036 7.9E-09 40.6 8.5 69 13-81 283-363 (427)
263 KOG4190|consensus 97.8 8.4E-05 1.8E-09 44.7 5.5 79 2-83 774-911 (1034)
264 PRK04922 tolB translocation pr 97.8 0.0011 2.3E-08 38.8 9.6 68 14-81 292-371 (433)
265 PRK01029 tolB translocation pr 97.8 0.001 2.2E-08 38.9 9.5 69 13-81 326-406 (428)
266 PRK03629 tolB translocation pr 97.8 0.0012 2.6E-08 38.6 9.7 69 13-81 286-366 (429)
267 KOG2041|consensus 97.8 0.00021 4.6E-09 44.2 6.7 70 6-76 65-143 (1189)
268 TIGR02658 TTQ_MADH_Hv methylam 97.8 0.0011 2.4E-08 37.9 9.2 67 17-83 251-335 (352)
269 KOG4497|consensus 97.8 0.00064 1.4E-08 38.6 8.0 68 15-82 320-395 (447)
270 PRK01029 tolB translocation pr 97.8 0.0009 2E-08 39.1 8.8 68 15-82 282-363 (428)
271 COG2706 3-carboxymuconate cycl 97.7 0.0016 3.4E-08 37.0 9.0 64 16-79 147-222 (346)
272 PRK05137 tolB translocation pr 97.7 0.0013 2.7E-08 38.5 8.9 69 13-81 245-325 (435)
273 KOG3617|consensus 97.7 3.6E-05 7.9E-10 48.1 2.7 63 16-78 62-131 (1416)
274 KOG2321|consensus 97.7 0.0002 4.4E-09 43.0 5.5 67 15-82 230-306 (703)
275 TIGR02800 propeller_TolB tol-p 97.7 0.0022 4.9E-08 37.0 9.4 66 15-80 279-356 (417)
276 PLN02919 haloacid dehalogenase 97.6 0.0013 2.9E-08 42.5 8.9 66 17-82 807-892 (1057)
277 KOG1275|consensus 97.6 0.00057 1.2E-08 43.2 7.0 73 3-78 208-342 (1118)
278 TIGR02658 TTQ_MADH_Hv methylam 97.6 0.0039 8.5E-08 35.8 9.9 78 3-83 38-141 (352)
279 KOG3621|consensus 97.5 0.00049 1.1E-08 42.1 5.8 67 13-79 76-155 (726)
280 KOG0309|consensus 97.5 0.00063 1.4E-08 42.3 6.2 75 5-80 107-190 (1081)
281 PF04762 IKI3: IKI3 family; I 97.5 0.0024 5.3E-08 40.8 8.5 63 13-75 75-147 (928)
282 KOG2079|consensus 97.5 0.0015 3.3E-08 42.0 7.4 63 13-77 130-202 (1206)
283 KOG4714|consensus 97.5 0.00048 1E-08 37.8 4.7 37 8-45 219-256 (319)
284 PRK00178 tolB translocation pr 97.5 0.0067 1.5E-07 35.4 9.6 68 14-81 243-322 (430)
285 KOG0882|consensus 97.4 0.0021 4.5E-08 37.9 7.0 71 13-83 144-236 (558)
286 KOG2079|consensus 97.4 0.00061 1.3E-08 43.6 5.2 60 24-83 98-165 (1206)
287 KOG1354|consensus 97.4 0.0017 3.7E-08 37.1 6.3 68 13-80 25-118 (433)
288 KOG4640|consensus 97.4 0.0012 2.6E-08 40.1 6.1 44 3-47 52-96 (665)
289 KOG4547|consensus 97.4 0.004 8.6E-08 37.4 7.8 71 4-77 136-219 (541)
290 PF10282 Lactonase: Lactonase, 97.3 0.0092 2E-07 34.0 9.5 67 15-81 246-327 (345)
291 KOG2041|consensus 97.3 0.0039 8.6E-08 39.0 7.3 69 13-81 14-104 (1189)
292 KOG1354|consensus 97.2 0.0014 3.1E-08 37.4 4.6 75 4-79 155-245 (433)
293 PRK04792 tolB translocation pr 97.1 0.019 4.2E-07 34.0 9.3 66 16-81 264-341 (448)
294 PF15492 Nbas_N: Neuroblastoma 97.1 0.0022 4.8E-08 35.5 4.8 35 13-47 229-263 (282)
295 KOG0280|consensus 97.1 0.0031 6.8E-08 35.3 5.0 51 8-59 206-264 (339)
296 PF10282 Lactonase: Lactonase, 97.0 0.024 5.3E-07 32.3 9.6 65 14-78 144-222 (345)
297 COG5354 Uncharacterized protei 96.9 0.013 2.7E-07 35.2 7.1 69 13-81 274-351 (561)
298 PF10313 DUF2415: Uncharacteri 96.9 0.0055 1.2E-07 24.5 4.7 29 15-43 2-33 (43)
299 COG5170 CDC55 Serine/threonine 96.9 0.0026 5.6E-08 36.1 3.9 67 14-81 222-312 (460)
300 PF11768 DUF3312: Protein of u 96.9 0.0051 1.1E-07 37.1 5.3 33 48-80 259-291 (545)
301 PLN02919 haloacid dehalogenase 96.9 0.036 7.8E-07 36.4 9.2 66 17-82 743-837 (1057)
302 KOG2314|consensus 96.8 0.019 4.1E-07 35.0 7.0 67 16-83 213-295 (698)
303 PF08596 Lgl_C: Lethal giant l 96.8 0.035 7.6E-07 32.6 8.0 71 5-77 79-172 (395)
304 KOG2066|consensus 96.8 0.064 1.4E-06 34.0 9.7 18 25-42 83-100 (846)
305 KOG1275|consensus 96.8 0.017 3.6E-07 37.1 6.9 64 16-83 180-259 (1118)
306 COG4946 Uncharacterized protei 96.8 0.05 1.1E-06 32.8 9.2 70 13-82 359-435 (668)
307 KOG1912|consensus 96.7 0.026 5.6E-07 35.9 7.6 79 3-82 46-147 (1062)
308 COG5170 CDC55 Serine/threonine 96.7 0.015 3.2E-07 33.2 6.1 68 13-80 26-119 (460)
309 PF10313 DUF2415: Uncharacteri 96.6 0.012 2.5E-07 23.6 5.0 30 50-79 2-34 (43)
310 PF04762 IKI3: IKI3 family; I 96.6 0.042 9.2E-07 35.6 7.9 66 14-80 257-335 (928)
311 PF10168 Nup88: Nuclear pore c 96.4 0.11 2.4E-06 32.9 9.6 68 13-80 84-181 (717)
312 KOG1920|consensus 96.4 0.089 1.9E-06 34.9 8.5 62 13-74 68-135 (1265)
313 PF11715 Nup160: Nucleoporin N 96.3 0.053 1.1E-06 32.9 7.2 34 50-83 216-253 (547)
314 KOG3914|consensus 96.3 0.085 1.8E-06 30.8 7.4 32 48-79 151-182 (390)
315 PF08553 VID27: VID27 cytoplas 96.1 0.083 1.8E-06 33.8 7.4 61 14-76 578-645 (794)
316 PRK04043 tolB translocation pr 96.1 0.14 3E-06 30.4 10.8 67 15-81 189-268 (419)
317 PF08553 VID27: VID27 cytoplas 95.8 0.28 6E-06 31.6 9.0 74 1-77 513-605 (794)
318 PF14783 BBS2_Mid: Ciliary BBS 95.7 0.093 2E-06 25.4 8.6 60 16-76 2-69 (111)
319 KOG2314|consensus 95.7 0.14 3.1E-06 31.5 6.7 64 16-79 495-574 (698)
320 PF07433 DUF1513: Protein of u 95.6 0.2 4.2E-06 28.6 11.0 82 1-83 147-252 (305)
321 KOG3617|consensus 95.6 0.38 8.2E-06 31.5 8.5 34 9-43 98-131 (1416)
322 PF14655 RAB3GAP2_N: Rab3 GTPa 95.5 0.25 5.4E-06 29.4 10.6 70 14-83 308-403 (415)
323 PF15390 DUF4613: Domain of un 95.4 0.27 5.9E-06 30.6 7.3 31 48-78 155-186 (671)
324 KOG1832|consensus 95.4 0.049 1.1E-06 35.4 4.5 72 6-78 1095-1175(1516)
325 COG5354 Uncharacterized protei 95.4 0.084 1.8E-06 31.9 5.2 70 13-83 32-121 (561)
326 PRK02888 nitrous-oxide reducta 95.2 0.43 9.4E-06 30.0 8.5 65 15-79 322-405 (635)
327 PF12234 Rav1p_C: RAVE protein 95.1 0.47 1E-05 29.9 9.0 61 16-76 32-102 (631)
328 KOG4649|consensus 95.1 0.31 6.6E-06 27.5 8.3 60 24-83 62-128 (354)
329 PRK04043 tolB translocation pr 95.0 0.39 8.4E-06 28.6 10.8 69 13-81 232-312 (419)
330 PF00930 DPPIV_N: Dipeptidyl p 95.0 0.11 2.5E-06 29.8 4.9 48 34-82 22-75 (353)
331 PF08450 SGL: SMP-30/Gluconola 94.8 0.31 6.7E-06 26.4 10.5 65 14-78 134-213 (246)
332 KOG0882|consensus 94.7 0.29 6.3E-06 29.5 5.9 35 13-47 201-235 (558)
333 PF07569 Hira: TUP1-like enhan 94.5 0.15 3.3E-06 27.6 4.4 21 24-44 21-41 (219)
334 KOG1645|consensus 94.5 0.23 4.9E-06 29.5 5.1 34 14-47 236-270 (463)
335 PF13360 PQQ_2: PQQ-like domai 94.4 0.33 7.1E-06 25.9 5.6 58 24-82 35-98 (238)
336 TIGR03300 assembly_YfgL outer 94.3 0.57 1.2E-05 27.1 8.7 58 24-82 104-167 (377)
337 KOG0309|consensus 94.2 0.064 1.4E-06 34.1 2.9 66 14-79 159-233 (1081)
338 KOG2114|consensus 93.9 1.1 2.5E-05 29.2 8.2 67 13-79 125-202 (933)
339 KOG3621|consensus 93.9 0.46 1E-05 30.1 5.8 67 13-79 33-107 (726)
340 PF08596 Lgl_C: Lethal giant l 93.8 0.8 1.7E-05 27.2 8.8 35 48-83 86-120 (395)
341 KOG2444|consensus 93.8 0.61 1.3E-05 25.7 5.9 19 25-43 70-88 (238)
342 PF07569 Hira: TUP1-like enhan 93.3 0.7 1.5E-05 25.1 9.3 22 60-81 22-43 (219)
343 PRK02888 nitrous-oxide reducta 93.3 1.3 2.8E-05 28.0 9.0 48 34-81 295-354 (635)
344 KOG4460|consensus 93.3 1.2 2.7E-05 27.7 7.7 66 15-80 105-200 (741)
345 KOG2395|consensus 92.8 0.8 1.7E-05 28.4 5.6 51 25-76 441-498 (644)
346 KOG1920|consensus 92.4 2 4.3E-05 29.3 7.2 65 16-80 244-324 (1265)
347 COG3386 Gluconolactonase [Carb 92.4 1.3 2.7E-05 25.5 8.7 73 5-78 155-243 (307)
348 PF12234 Rav1p_C: RAVE protein 92.3 1.9 4.1E-05 27.4 6.9 63 13-77 72-155 (631)
349 COG2706 3-carboxymuconate cycl 92.2 1.4 3E-05 25.7 8.6 67 13-79 39-120 (346)
350 KOG1008|consensus 92.0 0.39 8.5E-06 30.3 3.8 63 15-78 197-275 (783)
351 KOG2395|consensus 91.5 2.3 4.9E-05 26.6 7.3 73 2-77 366-458 (644)
352 KOG1008|consensus 91.5 0.078 1.7E-06 33.1 0.6 60 16-76 157-223 (783)
353 KOG1912|consensus 91.4 0.26 5.6E-06 31.8 2.7 77 5-82 460-555 (1062)
354 TIGR03300 assembly_YfgL outer 91.2 1.9 4.1E-05 25.0 6.8 57 25-83 279-343 (377)
355 PF12657 TFIIIC_delta: Transcr 90.8 1.4 3E-05 22.9 8.5 29 50-78 87-121 (173)
356 PF08450 SGL: SMP-30/Gluconola 90.7 1.7 3.7E-05 23.6 8.9 65 13-78 85-164 (246)
357 PF10214 Rrn6: RNA polymerase 90.3 3.5 7.6E-05 26.8 8.8 67 14-81 146-235 (765)
358 COG0823 TolB Periplasmic compo 90.3 2.6 5.7E-05 25.4 6.3 64 17-80 241-316 (425)
359 PF04053 Coatomer_WDAD: Coatom 90.3 1.7 3.6E-05 26.3 5.2 50 25-76 117-171 (443)
360 KOG3616|consensus 90.3 2.6 5.6E-05 27.8 6.2 61 13-75 14-80 (1636)
361 PF06977 SdiA-regulated: SdiA- 90.3 2 4.4E-05 23.9 9.1 77 2-78 53-147 (248)
362 PF07433 DUF1513: Protein of u 90.1 2.4 5.2E-05 24.5 8.3 53 14-67 217-275 (305)
363 KOG2377|consensus 90.0 3.1 6.8E-05 25.7 7.0 30 48-77 66-95 (657)
364 PF11715 Nup160: Nucleoporin N 89.6 1.4 3.1E-05 27.0 4.7 34 14-47 215-252 (547)
365 PF14655 RAB3GAP2_N: Rab3 GTPa 89.4 1.9 4.2E-05 25.9 4.9 36 48-83 307-342 (415)
366 KOG3630|consensus 89.2 3.7 8.1E-05 28.1 6.3 51 14-64 199-259 (1405)
367 KOG2444|consensus 89.0 2.6 5.6E-05 23.4 5.3 54 24-78 113-166 (238)
368 KOG2377|consensus 88.7 4 8.8E-05 25.3 7.5 54 13-67 66-130 (657)
369 COG0823 TolB Periplasmic compo 88.5 3.8 8.3E-05 24.7 7.8 69 13-81 192-273 (425)
370 PF00780 CNH: CNH domain; Int 88.4 2.9 6.2E-05 23.1 6.4 54 24-79 6-65 (275)
371 PRK13616 lipoprotein LpqB; Pro 88.4 4.7 0.0001 25.5 6.9 58 16-74 399-472 (591)
372 PF06977 SdiA-regulated: SdiA- 87.1 3.7 8E-05 22.9 8.7 69 7-77 16-93 (248)
373 PF02897 Peptidase_S9_N: Proly 87.0 4.5 9.8E-05 23.9 7.1 50 18-67 128-188 (414)
374 PF12768 Rax2: Cortical protei 87.0 4 8.7E-05 23.3 5.2 49 33-81 14-75 (281)
375 PF06433 Me-amine-dh_H: Methyl 87.0 2.4 5.2E-05 24.9 4.2 36 48-83 288-325 (342)
376 COG3204 Uncharacterized protei 86.5 4.6 9.9E-05 23.4 7.8 77 2-78 117-210 (316)
377 PF04841 Vps16_N: Vps16, N-ter 86.5 5.1 0.00011 24.0 10.0 47 14-60 217-271 (410)
378 PF07676 PD40: WD40-like Beta 86.2 1.3 2.7E-05 16.7 4.8 16 14-29 9-24 (39)
379 KOG1832|consensus 85.9 0.37 7.9E-06 31.8 0.8 80 2-82 1133-1218(1516)
380 COG5167 VID27 Protein involved 85.7 6.9 0.00015 24.7 6.4 54 24-78 572-632 (776)
381 PF13360 PQQ_2: PQQ-like domai 85.6 3.9 8.5E-05 21.8 9.7 55 27-83 175-235 (238)
382 KOG1916|consensus 85.3 5.8 0.00013 26.8 5.6 64 14-77 181-264 (1283)
383 COG3204 Uncharacterized protei 85.2 5.5 0.00012 23.1 6.7 64 13-76 85-156 (316)
384 KOG2066|consensus 85.1 6.8 0.00015 25.8 5.7 62 15-79 41-102 (846)
385 PF01436 NHL: NHL repeat; Int 85.0 1.3 2.7E-05 15.7 4.0 9 53-61 6-14 (28)
386 PF08728 CRT10: CRT10; InterP 84.9 8.5 0.00018 25.1 7.3 64 14-77 164-245 (717)
387 PF04841 Vps16_N: Vps16, N-ter 84.8 6.5 0.00014 23.6 8.4 43 36-79 62-110 (410)
388 KOG1916|consensus 84.6 5.7 0.00012 26.8 5.3 24 20-43 242-265 (1283)
389 KOG3630|consensus 83.9 2.1 4.5E-05 29.2 3.3 62 16-77 158-227 (1405)
390 PF15390 DUF4613: Domain of un 83.2 9.7 0.00021 24.4 6.3 33 13-45 155-188 (671)
391 PF13570 PQQ_3: PQQ-like domai 83.1 2 4.3E-05 16.3 4.7 19 25-43 21-39 (40)
392 PF08728 CRT10: CRT10; InterP 81.7 12 0.00026 24.5 6.0 64 14-77 101-194 (717)
393 TIGR02276 beta_rpt_yvtn 40-res 81.5 2.3 5E-05 16.0 3.6 10 70-79 14-23 (42)
394 smart00564 PQQ beta-propeller 80.8 2.1 4.6E-05 15.2 3.1 19 63-81 9-27 (33)
395 PF04053 Coatomer_WDAD: Coatom 80.5 11 0.00023 23.1 6.3 28 14-42 33-60 (443)
396 PF03178 CPSF_A: CPSF A subuni 80.1 8.9 0.00019 21.9 6.5 62 15-78 131-202 (321)
397 PRK11138 outer membrane biogen 80.0 9.9 0.00021 22.4 7.7 57 25-82 120-182 (394)
398 KOG4499|consensus 79.8 8.9 0.00019 21.8 6.7 67 17-83 161-246 (310)
399 PF14583 Pectate_lyase22: Olig 78.1 11 0.00023 22.7 4.7 62 20-81 42-113 (386)
400 PF06433 Me-amine-dh_H: Methyl 78.1 11 0.00025 22.2 4.7 44 1-46 278-323 (342)
401 PF10168 Nup88: Nuclear pore c 78.1 10 0.00022 24.7 4.9 33 13-45 146-181 (717)
402 TIGR03118 PEPCTERM_chp_1 conse 76.9 13 0.00027 21.9 7.7 62 16-77 25-117 (336)
403 COG3490 Uncharacterized protei 76.6 13 0.00028 21.8 5.6 47 20-66 120-179 (366)
404 PF14761 HPS3_N: Hermansky-Pud 76.5 11 0.00023 20.8 6.1 43 26-68 29-79 (215)
405 KOG1900|consensus 76.4 24 0.00052 24.9 6.9 67 13-79 178-273 (1311)
406 PF11635 Med16: Mediator compl 76.3 19 0.00041 23.7 7.2 61 13-73 259-345 (753)
407 PF14870 PSII_BNR: Photosynthe 75.5 13 0.00029 21.5 10.2 63 13-76 144-213 (302)
408 PF10214 Rrn6: RNA polymerase 75.2 21 0.00045 23.5 8.5 30 48-77 145-175 (765)
409 PF14783 BBS2_Mid: Ciliary BBS 74.8 8.4 0.00018 18.9 9.5 60 13-73 42-109 (111)
410 PF01011 PQQ: PQQ enzyme repea 73.2 4.7 0.0001 15.2 3.3 16 66-81 6-21 (38)
411 PF03178 CPSF_A: CPSF A subuni 73.0 15 0.00033 21.0 6.8 59 13-76 88-155 (321)
412 TIGR03075 PQQ_enz_alc_DH PQQ-d 72.0 22 0.00047 22.3 6.9 24 60-83 472-495 (527)
413 COG3391 Uncharacterized conser 71.6 19 0.0004 21.4 8.6 65 17-81 119-193 (381)
414 KOG3616|consensus 69.5 14 0.0003 24.8 4.0 33 48-80 14-46 (1636)
415 PF14781 BBS2_N: Ciliary BBSom 69.4 13 0.00029 18.9 8.1 61 20-80 5-83 (136)
416 KOG2280|consensus 69.3 28 0.00061 23.2 5.1 31 14-45 84-114 (829)
417 PF01731 Arylesterase: Arylest 67.8 11 0.00025 17.4 4.1 30 50-79 55-85 (86)
418 PRK11138 outer membrane biogen 66.6 25 0.00053 20.8 6.7 55 26-82 295-357 (394)
419 TIGR03606 non_repeat_PQQ dehyd 66.2 29 0.00062 21.5 7.7 47 14-60 30-90 (454)
420 PF07995 GSDH: Glucose / Sorbo 64.3 26 0.00057 20.4 6.5 43 16-59 4-59 (331)
421 KOG2114|consensus 64.2 43 0.00092 22.8 8.7 68 13-81 171-246 (933)
422 KOG2109|consensus 63.5 2.9 6.3E-05 26.8 0.4 36 6-42 309-345 (788)
423 PF08801 Nucleoporin_N: Nup133 62.8 19 0.00041 21.6 3.5 31 14-44 190-220 (422)
424 KOG2467|consensus 61.9 12 0.00025 22.7 2.5 22 59-80 340-361 (477)
425 PF03088 Str_synth: Strictosid 60.8 17 0.00037 17.0 3.6 35 32-66 34-74 (89)
426 PF10647 Gmad1: Lipoprotein Lp 55.1 36 0.00078 19.0 7.1 54 15-68 113-185 (253)
427 KOG4499|consensus 52.9 43 0.00093 19.2 4.9 40 19-58 217-263 (310)
428 TIGR02608 delta_60_rpt delta-6 50.9 21 0.00045 15.1 4.5 17 16-32 3-19 (55)
429 PF10584 Proteasome_A_N: Prote 50.4 3.1 6.8E-05 14.3 -0.6 7 21-27 8-14 (23)
430 PF14269 Arylsulfotran_2: Aryl 49.7 51 0.0011 19.1 6.4 32 16-47 146-177 (299)
431 COG4590 ABC-type uncharacteriz 48.1 71 0.0015 20.4 7.0 55 26-81 329-389 (733)
432 PF12341 DUF3639: Protein of u 47.6 17 0.00036 13.0 3.6 15 26-40 12-26 (27)
433 COG1946 TesB Acyl-CoA thioeste 46.8 58 0.0013 19.0 4.4 27 48-74 258-284 (289)
434 KOG4460|consensus 45.2 85 0.0018 20.4 4.9 28 49-76 104-131 (741)
435 PRK10115 protease 2; Provision 44.3 91 0.002 20.5 8.5 65 16-80 129-209 (686)
436 PF15644 Tox-PL: Papain fold t 43.1 41 0.00088 16.2 2.9 22 60-81 88-109 (111)
437 PF14870 PSII_BNR: Photosynthe 42.9 69 0.0015 18.7 7.7 60 13-74 186-257 (302)
438 KOG1983|consensus 39.8 62 0.0013 22.4 3.4 24 22-45 243-266 (993)
439 KOG4649|consensus 39.8 79 0.0017 18.5 7.6 27 21-47 101-127 (354)
440 PF02870 Methyltransf_1N: 6-O- 39.7 34 0.00074 15.0 1.8 20 22-41 9-28 (77)
441 KOG2280|consensus 39.0 1.2E+02 0.0027 20.5 6.1 44 34-78 63-112 (829)
442 PF11635 Med16: Mediator compl 38.2 1.2E+02 0.0027 20.3 4.5 36 48-83 259-294 (753)
443 PF05694 SBP56: 56kDa selenium 37.8 1E+02 0.0023 19.4 6.6 34 14-47 312-346 (461)
444 PF06739 SBBP: Beta-propeller 37.5 31 0.00066 13.1 3.1 22 14-35 13-34 (38)
445 PF13418 Kelch_4: Galactose ox 37.1 33 0.00071 13.3 2.7 10 72-81 31-40 (49)
446 PF15527 Toxin_47: Putative to 36.4 54 0.0012 16.1 2.2 35 26-60 10-48 (129)
447 COG5308 NUP170 Nuclear pore co 36.4 1.5E+02 0.0033 20.9 4.7 27 49-77 182-208 (1263)
448 PHA02713 hypothetical protein; 35.9 1.2E+02 0.0026 19.4 4.4 24 59-82 512-537 (557)
449 PF07250 Glyoxal_oxid_N: Glyox 35.8 86 0.0019 17.8 6.6 59 22-82 126-201 (243)
450 PF10395 Utp8: Utp8 family; I 35.6 1.4E+02 0.0029 20.0 9.7 75 3-77 61-158 (670)
451 KOG1983|consensus 35.5 86 0.0019 21.8 3.6 25 57-81 243-267 (993)
452 PF11005 DUF2844: Protein of u 34.8 68 0.0015 16.4 3.0 20 2-22 42-61 (132)
453 PF08149 BING4CT: BING4CT (NUC 34.7 54 0.0012 15.2 3.3 24 13-36 9-32 (80)
454 PF10411 DsbC_N: Disulfide bon 34.3 44 0.00095 14.0 3.2 10 22-31 39-48 (57)
455 COG3391 Uncharacterized conser 33.0 1.1E+02 0.0024 18.3 10.4 65 17-81 163-242 (381)
456 PF05787 DUF839: Bacterial pro 32.8 1.4E+02 0.0029 19.2 5.7 18 48-65 501-518 (524)
457 PF00843 Arena_nucleocap: Aren 32.2 20 0.00042 22.2 0.4 15 67-81 149-163 (533)
458 PF14567 SUKH_5: SMI1-KNR4 cel 31.7 79 0.0017 16.1 2.9 22 56-77 90-111 (132)
459 PF13964 Kelch_6: Kelch motif 30.3 46 0.001 13.0 2.8 9 72-80 30-38 (50)
460 TIGR01643 YD_repeat_2x YD repe 29.9 43 0.00093 12.5 6.0 26 13-38 14-39 (42)
461 PF07646 Kelch_2: Kelch motif; 29.6 48 0.001 13.0 3.8 10 72-81 32-41 (49)
462 KOG4469|consensus 29.5 55 0.0012 18.4 1.8 22 25-46 199-220 (391)
463 COG5290 IkappaB kinase complex 29.2 2E+02 0.0044 20.1 6.7 21 14-34 247-267 (1243)
464 KOG3950|consensus 27.9 1.3E+02 0.0028 17.4 3.1 15 16-30 262-276 (292)
465 cd03444 Thioesterase_II_repeat 26.8 84 0.0018 14.9 3.3 23 48-70 80-102 (104)
466 PF14795 Leucyl-specific: Leuc 26.7 61 0.0013 13.6 1.3 9 68-76 47-55 (56)
467 PRK10526 acyl-CoA thioesterase 26.5 1.4E+02 0.003 17.2 4.8 27 48-74 258-284 (286)
468 COG4257 Vgb Streptogramin lyas 26.4 1.5E+02 0.0033 17.7 6.3 65 16-80 191-264 (353)
469 PF13983 YsaB: YsaB-like lipop 25.6 79 0.0017 14.2 1.9 12 17-28 61-72 (77)
470 PF02333 Phytase: Phytase; In 23.0 2E+02 0.0042 17.8 9.1 75 3-79 199-291 (381)
471 COG3251 Uncharacterized protei 22.5 95 0.002 13.9 1.6 21 23-43 9-29 (71)
472 PF14727 PHTB1_N: PTHB1 N-term 22.3 2.1E+02 0.0045 17.9 7.4 53 25-77 37-104 (418)
473 KOG1520|consensus 22.2 2E+02 0.0044 17.7 3.4 37 31-67 195-237 (376)
474 PF09309 FCP1_C: FCP1, C-termi 21.9 30 0.00065 19.5 0.0 15 70-84 54-68 (263)
475 PF10433 MMS1_N: Mono-function 21.5 2.2E+02 0.0048 17.8 5.8 32 48-79 43-74 (504)
476 PF01344 Kelch_1: Kelch motif; 21.5 70 0.0015 12.1 2.8 10 72-81 30-39 (47)
477 PF14779 BBS1: Ciliary BBSome 21.4 1.8E+02 0.0039 16.8 5.3 35 13-47 176-217 (257)
478 smart00415 HSF heat shock fact 21.2 1.2E+02 0.0025 14.5 2.1 15 18-32 21-35 (105)
No 1
>KOG0271|consensus
Probab=99.83 E-value=6.6e-20 Score=100.78 Aligned_cols=79 Identities=22% Similarity=0.449 Sum_probs=72.0
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
+-..+.+| .++|.++.|+|+++.|++|+.|..+++||+.+..+ .+.|.+++|+|+++.+++|+.+|.|++||
T Consensus 107 CssS~~GH-~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwd 185 (480)
T KOG0271|consen 107 CSSSIAGH-GEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWD 185 (480)
T ss_pred eccccCCC-CCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEec
Confidence 44567889 99999999999999999999999999999987765 67899999999999999999999999999
Q ss_pred CCCCeec
Q psy16880 77 LNSKLCD 83 (84)
Q Consensus 77 ~~~~~~~ 83 (84)
+.+++++
T Consensus 186 pktg~~~ 192 (480)
T KOG0271|consen 186 PKTGQQI 192 (480)
T ss_pred CCCCCcc
Confidence 9887754
No 2
>KOG0272|consensus
Probab=99.78 E-value=2.9e-18 Score=94.94 Aligned_cols=83 Identities=16% Similarity=0.320 Sum_probs=75.4
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEcc-CCCEEEEecCCCcE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCS-KQRTLISGGDDGSI 72 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~-~~~~~~~~~~~~~i 72 (84)
+|+++..+.+| ..+|..++|+|+|..+++|+.|+.+++||++.... .+.|+.+.|.| .|.++++++.|+++
T Consensus 334 tgr~im~L~gH-~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~ 412 (459)
T KOG0272|consen 334 TGRCIMFLAGH-IKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTV 412 (459)
T ss_pred cCcEEEEeccc-ccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcce
Confidence 58899999999 99999999999999999999999999999986554 67899999998 77899999999999
Q ss_pred EEEeCCCCeecC
Q psy16880 73 CMWNLNSKLCDR 84 (84)
Q Consensus 73 ~~~~~~~~~~~~ 84 (84)
++|..++..+++
T Consensus 413 kiWs~~~~~~~k 424 (459)
T KOG0272|consen 413 KIWSTRTWSPLK 424 (459)
T ss_pred eeecCCCcccch
Confidence 999998877653
No 3
>KOG0272|consensus
Probab=99.78 E-value=6.9e-19 Score=97.36 Aligned_cols=78 Identities=22% Similarity=0.346 Sum_probs=70.7
Q ss_pred EEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
+...++| ...|.+++|.++|+++++|+.|..-++||++++.. ..+|..++|+|+|..+++|+.|++++|||+
T Consensus 296 lL~QEGH-s~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDL 374 (459)
T KOG0272|consen 296 LLLQEGH-SKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDL 374 (459)
T ss_pred hHhhccc-ccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeee
Confidence 3445788 89999999999999999999999999999999877 678999999999999999999999999999
Q ss_pred CCCeec
Q psy16880 78 NSKLCD 83 (84)
Q Consensus 78 ~~~~~~ 83 (84)
+....+
T Consensus 375 R~r~~l 380 (459)
T KOG0272|consen 375 RMRSEL 380 (459)
T ss_pred cccccc
Confidence 876653
No 4
>KOG0263|consensus
Probab=99.77 E-value=2.4e-18 Score=100.25 Aligned_cols=80 Identities=24% Similarity=0.468 Sum_probs=74.0
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
++++.+-+| .+.|.|++|+|+..++++|+.|.++++||+.++.. .+.|.+++|+|+|+++++++.|+.|++|
T Consensus 526 ~PlRifagh-lsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iW 604 (707)
T KOG0263|consen 526 KPLRIFAGH-LSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIW 604 (707)
T ss_pred Cchhhhccc-ccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEE
Confidence 467788888 99999999999999999999999999999998866 7789999999999999999999999999
Q ss_pred eCCCCeec
Q psy16880 76 NLNSKLCD 83 (84)
Q Consensus 76 ~~~~~~~~ 83 (84)
|+.++..+
T Consensus 605 Dl~~~~~v 612 (707)
T KOG0263|consen 605 DLANGSLV 612 (707)
T ss_pred EcCCCcch
Confidence 99987654
No 5
>KOG0263|consensus
Probab=99.75 E-value=4e-17 Score=95.28 Aligned_cols=78 Identities=29% Similarity=0.585 Sum_probs=73.0
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
+|..++.+.+| .++|.+++|+|+|++|++|+.++.+.+||+..+.. .+.|..+.|+.++..+++++.|+.++
T Consensus 566 ~G~~VRiF~GH-~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~ 644 (707)
T KOG0263|consen 566 TGNSVRIFTGH-KGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVR 644 (707)
T ss_pred CCcEEEEecCC-CCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEE
Confidence 57889999999 99999999999999999999999999999988766 77899999999999999999999999
Q ss_pred EEeCCC
Q psy16880 74 MWNLNS 79 (84)
Q Consensus 74 ~~~~~~ 79 (84)
+||+..
T Consensus 645 lWD~~~ 650 (707)
T KOG0263|consen 645 LWDLTK 650 (707)
T ss_pred EEEchh
Confidence 999864
No 6
>KOG0266|consensus
Probab=99.74 E-value=1.5e-16 Score=91.02 Aligned_cols=79 Identities=27% Similarity=0.623 Sum_probs=73.4
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
+..++++++| ...|.+++|+|+++.+++|+.|+.+++||++++.. ...|.+++|.+++..+++++.|+.|++
T Consensus 236 ~~~~~~l~gH-~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~v 314 (456)
T KOG0266|consen 236 GRNLKTLKGH-STYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRV 314 (456)
T ss_pred CeEEEEecCC-CCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEE
Confidence 5678899999 99999999999999999999999999999998655 678999999999999999999999999
Q ss_pred EeCCCCe
Q psy16880 75 WNLNSKL 81 (84)
Q Consensus 75 ~~~~~~~ 81 (84)
||+.++.
T Consensus 315 wd~~~~~ 321 (456)
T KOG0266|consen 315 WDLETGS 321 (456)
T ss_pred EECCCCc
Confidence 9999877
No 7
>KOG0279|consensus
Probab=99.73 E-value=8.5e-17 Score=85.60 Aligned_cols=81 Identities=23% Similarity=0.421 Sum_probs=72.8
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccC--CCEEEEecCCC
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSK--QRTLISGGDDG 70 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~--~~~~~~~~~~~ 70 (84)
+|+..+.|.+| ...|.+++++++.+.+++|+.|..+.+|+...... +..|+++.|+|+ ...+++++.|+
T Consensus 94 ~g~~t~~f~GH-~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dk 172 (315)
T KOG0279|consen 94 TGESTRRFVGH-TKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDK 172 (315)
T ss_pred CCcEEEEEEec-CCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCc
Confidence 46888999999 99999999999999999999999999999976544 457999999998 68999999999
Q ss_pred cEEEEeCCCCee
Q psy16880 71 SICMWNLNSKLC 82 (84)
Q Consensus 71 ~i~~~~~~~~~~ 82 (84)
++++||+++.+.
T Consensus 173 tvKvWnl~~~~l 184 (315)
T KOG0279|consen 173 TVKVWNLRNCQL 184 (315)
T ss_pred eEEEEccCCcch
Confidence 999999987654
No 8
>KOG0271|consensus
Probab=99.73 E-value=6.6e-17 Score=89.22 Aligned_cols=81 Identities=21% Similarity=0.409 Sum_probs=71.7
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEcc-----CCCEEEEecC
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCS-----KQRTLISGGD 68 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~-----~~~~~~~~~~ 68 (84)
..+..+.++| ...|.|++|+|++..+++|+.++.+++||..++.. ...|.+++|.| ..+.+++++.
T Consensus 147 eTp~~t~KgH-~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~sk 225 (480)
T KOG0271|consen 147 ETPLFTCKGH-KNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSK 225 (480)
T ss_pred CCcceeecCC-ccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccC
Confidence 4567788899 99999999999999999999999999999887766 67899999986 4578899999
Q ss_pred CCcEEEEeCCCCeec
Q psy16880 69 DGSICMWNLNSKLCD 83 (84)
Q Consensus 69 ~~~i~~~~~~~~~~~ 83 (84)
||.++|||+..+.++
T Consensus 226 Dg~vrIWd~~~~~~~ 240 (480)
T KOG0271|consen 226 DGSVRIWDTKLGTCV 240 (480)
T ss_pred CCCEEEEEccCceEE
Confidence 999999999887664
No 9
>KOG0286|consensus
Probab=99.71 E-value=3.2e-16 Score=84.00 Aligned_cols=82 Identities=26% Similarity=0.485 Sum_probs=75.6
Q ss_pred CCceEEEeccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSI 72 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i 72 (84)
+|+.++.+.+| .+.|.++++.| +++.+++|+.|...++||++.+.. +..|..++|.|++.-+++|+.|+++
T Consensus 175 ~g~~~~~f~GH-~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tc 253 (343)
T KOG0286|consen 175 TGQQTQVFHGH-TGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATC 253 (343)
T ss_pred cceEEEEecCC-cccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCcee
Confidence 57888999999 99999999999 899999999999999999998866 7789999999999999999999999
Q ss_pred EEEeCCCCeec
Q psy16880 73 CMWNLNSKLCD 83 (84)
Q Consensus 73 ~~~~~~~~~~~ 83 (84)
++||++..+.+
T Consensus 254 RlyDlRaD~~~ 264 (343)
T KOG0286|consen 254 RLYDLRADQEL 264 (343)
T ss_pred EEEeecCCcEE
Confidence 99999976543
No 10
>KOG0315|consensus
Probab=99.71 E-value=4.5e-16 Score=82.08 Aligned_cols=79 Identities=29% Similarity=0.641 Sum_probs=72.3
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
.++.++++| .+.|.++.|..+|+.+.+|+.||.+++||++.... ...|.++..+|+...++++..+|.|++||
T Consensus 74 ~Pv~t~e~h-~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWD 152 (311)
T KOG0315|consen 74 NPVATFEGH-TKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWD 152 (311)
T ss_pred CceeEEecc-CCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEE
Confidence 378899999 99999999999999999999999999999998655 77899999999999999999999999999
Q ss_pred CCCCee
Q psy16880 77 LNSKLC 82 (84)
Q Consensus 77 ~~~~~~ 82 (84)
+....+
T Consensus 153 l~~~~c 158 (311)
T KOG0315|consen 153 LGENSC 158 (311)
T ss_pred ccCCcc
Confidence 987643
No 11
>PTZ00421 coronin; Provisional
Probab=99.70 E-value=8.4e-16 Score=88.60 Aligned_cols=80 Identities=15% Similarity=0.226 Sum_probs=70.0
Q ss_pred ceEEEeccCCCcCEEEEEEccCC-CEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQ-HTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
.++..+.+| ...|.+++|+|++ ..|++++.|+.+++||+..... ...|.+++|+|++..+++++.|+.|++
T Consensus 116 ~~l~~L~gH-~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrI 194 (493)
T PTZ00421 116 DPIVHLQGH-TKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNI 194 (493)
T ss_pred cceEEecCC-CCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEE
Confidence 356678888 9999999999975 6899999999999999987654 557999999999999999999999999
Q ss_pred EeCCCCeec
Q psy16880 75 WNLNSKLCD 83 (84)
Q Consensus 75 ~~~~~~~~~ 83 (84)
||+++++.+
T Consensus 195 wD~rsg~~v 203 (493)
T PTZ00421 195 IDPRDGTIV 203 (493)
T ss_pred EECCCCcEE
Confidence 999987653
No 12
>KOG0266|consensus
Probab=99.69 E-value=7.3e-16 Score=88.27 Aligned_cols=79 Identities=25% Similarity=0.606 Sum_probs=69.7
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCC-CC-------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSK-LC-------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~-~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
.++.+.+| ...|..++|+|+++.+++++.|..+++||+... .. ...|++++|+|+++.+++|+.|++|++|
T Consensus 195 ~~~~l~~h-~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriW 273 (456)
T KOG0266|consen 195 LLRELSGH-TRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIW 273 (456)
T ss_pred hhcccccc-ccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEE
Confidence 45566778 899999999999999999999999999999433 22 6789999999999999999999999999
Q ss_pred eCCCCeec
Q psy16880 76 NLNSKLCD 83 (84)
Q Consensus 76 ~~~~~~~~ 83 (84)
|+++++++
T Consensus 274 d~~~~~~~ 281 (456)
T KOG0266|consen 274 DVRTGECV 281 (456)
T ss_pred eccCCeEE
Confidence 99987765
No 13
>KOG0273|consensus
Probab=99.69 E-value=6e-16 Score=86.99 Aligned_cols=80 Identities=24% Similarity=0.470 Sum_probs=67.1
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----------------------------------
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------------------------------- 47 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------------------------------- 47 (84)
.|+.++.+| .+.|.+|.|+|.+.+|++++.|+++++|.......
T Consensus 350 ~P~~t~~GH-~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sa 428 (524)
T KOG0273|consen 350 RPVKTFIGH-HGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASA 428 (524)
T ss_pred Ccceeeecc-cCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEe
Confidence 467788888 99999999999999999999999999999754432
Q ss_pred -----------------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 48 -----------------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 48 -----------------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
+.+|+.++|+|+++++++|+.|+.+++|+.++++.+
T Consensus 429 s~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~ 487 (524)
T KOG0273|consen 429 SFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLV 487 (524)
T ss_pred ecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchhee
Confidence 557888888888888888888888888888777654
No 14
>KOG0279|consensus
Probab=99.69 E-value=6.1e-16 Score=82.42 Aligned_cols=79 Identities=23% Similarity=0.440 Sum_probs=72.5
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
|.+++.+++| ...|..+..+++++++++++.|+.+++||+.++.. ...|.+++|+++.+.+++++.|++|++
T Consensus 53 G~~~r~~~GH-sH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTikl 131 (315)
T KOG0279|consen 53 GVPVRRLTGH-SHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKL 131 (315)
T ss_pred Cceeeeeecc-ceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeee
Confidence 7789999998 99999999999999999999999999999988654 678999999999999999999999999
Q ss_pred EeCCCCe
Q psy16880 75 WNLNSKL 81 (84)
Q Consensus 75 ~~~~~~~ 81 (84)
|+.-...
T Consensus 132 wnt~g~c 138 (315)
T KOG0279|consen 132 WNTLGVC 138 (315)
T ss_pred eeecccE
Confidence 9986543
No 15
>KOG0318|consensus
Probab=99.68 E-value=1.3e-15 Score=86.69 Aligned_cols=76 Identities=13% Similarity=0.358 Sum_probs=68.6
Q ss_pred EeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
+++.| ...|.++.|+|+|+++++++.|+.+.+||-.++.. .+.|.+++|+|++..+++++.|.++++||
T Consensus 185 s~r~H-skFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWd 263 (603)
T KOG0318|consen 185 SFREH-SKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWD 263 (603)
T ss_pred ccccc-ccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEE
Confidence 44556 78899999999999999999999999999887755 67899999999999999999999999999
Q ss_pred CCCCeec
Q psy16880 77 LNSKLCD 83 (84)
Q Consensus 77 ~~~~~~~ 83 (84)
..+.+++
T Consensus 264 Vs~~slv 270 (603)
T KOG0318|consen 264 VSTNSLV 270 (603)
T ss_pred eeccceE
Confidence 9887764
No 16
>KOG0315|consensus
Probab=99.67 E-value=1.1e-15 Score=80.62 Aligned_cols=81 Identities=25% Similarity=0.524 Sum_probs=71.8
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCc
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGS 71 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~ 71 (84)
+|.+.++++.. ++.|..+...|+++.|++++.. .+++||+++... .+.|..+.|..+++++++++.||+
T Consensus 29 tG~C~rTiqh~-dsqVNrLeiTpdk~~LAaa~~q-hvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt 106 (311)
T KOG0315|consen 29 TGICSRTIQHP-DSQVNRLEITPDKKDLAAAGNQ-HVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGT 106 (311)
T ss_pred cCeEEEEEecC-ccceeeEEEcCCcchhhhccCC-eeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCce
Confidence 68999999887 9999999999999999887754 799999987655 578999999999999999999999
Q ss_pred EEEEeCCCCeec
Q psy16880 72 ICMWNLNSKLCD 83 (84)
Q Consensus 72 i~~~~~~~~~~~ 83 (84)
++|||++...+.
T Consensus 107 ~kIWdlR~~~~q 118 (311)
T KOG0315|consen 107 VKIWDLRSLSCQ 118 (311)
T ss_pred EEEEeccCcccc
Confidence 999999986554
No 17
>KOG0282|consensus
Probab=99.67 E-value=7.4e-17 Score=90.57 Aligned_cols=82 Identities=22% Similarity=0.403 Sum_probs=75.6
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCC-CEEEEecCCCcEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQ-RTLISGGDDGSIC 73 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~-~~~~~~~~~~~i~ 73 (84)
++++++++.+| ..+|..++|+.++..|++++.|+.+++||..++.. ...++++.|+|+. +.+++|+.|+.|+
T Consensus 247 ~~~~lrtf~gH-~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~ 325 (503)
T KOG0282|consen 247 DRRCLRTFKGH-RKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIR 325 (503)
T ss_pred Ccceehhhhcc-hhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEE
Confidence 37899999999 99999999999999999999999999999999877 6678999999987 8889999999999
Q ss_pred EEeCCCCeec
Q psy16880 74 MWNLNSKLCD 83 (84)
Q Consensus 74 ~~~~~~~~~~ 83 (84)
.||+++++.+
T Consensus 326 ~wDiRs~kvv 335 (503)
T KOG0282|consen 326 QWDIRSGKVV 335 (503)
T ss_pred EEeccchHHH
Confidence 9999998754
No 18
>KOG0295|consensus
Probab=99.64 E-value=2.3e-15 Score=82.54 Aligned_cols=81 Identities=23% Similarity=0.544 Sum_probs=70.5
Q ss_pred ceEEEeccCCCcCEEEEEEccC---------------CCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCC
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSK---------------QHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQ 60 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~---------------~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~ 60 (84)
++...++.| +.+|.+++|-|. ++.+.+++.|+.+++||+.++.. .+.|+.++|+|.|
T Consensus 268 ~~k~~lR~h-Eh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~G 346 (406)
T KOG0295|consen 268 QCKAELREH-EHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGG 346 (406)
T ss_pred hhhhhhhcc-ccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCC
Confidence 345567788 999999999652 24889999999999999998877 7899999999999
Q ss_pred CEEEEecCCCcEEEEeCCCCeecC
Q psy16880 61 RTLISGGDDGSICMWNLNSKLCDR 84 (84)
Q Consensus 61 ~~~~~~~~~~~i~~~~~~~~~~~~ 84 (84)
++++++..|+++++||+++++|.+
T Consensus 347 kyi~ScaDDktlrvwdl~~~~cmk 370 (406)
T KOG0295|consen 347 KYILSCADDKTLRVWDLKNLQCMK 370 (406)
T ss_pred eEEEEEecCCcEEEEEeccceeee
Confidence 999999999999999999988753
No 19
>PTZ00420 coronin; Provisional
Probab=99.63 E-value=1.5e-14 Score=84.44 Aligned_cols=78 Identities=10% Similarity=0.133 Sum_probs=67.1
Q ss_pred EEEeccCCCcCEEEEEEccCCCE-EEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQHT-LISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
+..+.+| ...|.+++|+|++.. +++++.|+.+++||+..... ...|.+++|+|++..+++++.|+.+++||+
T Consensus 118 ~~~L~gH-~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~ 196 (568)
T PTZ00420 118 QCILKGH-KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDP 196 (568)
T ss_pred eEEeecC-CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEEC
Confidence 4456778 899999999998875 57899999999999987654 567999999999999999999999999999
Q ss_pred CCCeec
Q psy16880 78 NSKLCD 83 (84)
Q Consensus 78 ~~~~~~ 83 (84)
++++.+
T Consensus 197 Rsg~~i 202 (568)
T PTZ00420 197 RKQEIA 202 (568)
T ss_pred CCCcEE
Confidence 987653
No 20
>KOG0286|consensus
Probab=99.63 E-value=9.2e-15 Score=78.53 Aligned_cols=80 Identities=23% Similarity=0.417 Sum_probs=72.2
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCc
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGS 71 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~ 71 (84)
.|.++++|++| ++.|.+++|.|+|.-+++|+.|+.+++||++.... ...|..++|+..|+++..|..|..
T Consensus 218 ~~~c~qtF~gh-esDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~ 296 (343)
T KOG0286|consen 218 SGQCVQTFEGH-ESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFT 296 (343)
T ss_pred CcceeEeeccc-ccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCc
Confidence 36789999999 99999999999999999999999999999997655 568999999999999999999999
Q ss_pred EEEEeCCCCe
Q psy16880 72 ICMWNLNSKL 81 (84)
Q Consensus 72 i~~~~~~~~~ 81 (84)
+.+||.-.++
T Consensus 297 c~vWDtlk~e 306 (343)
T KOG0286|consen 297 CNVWDTLKGE 306 (343)
T ss_pred eeEeeccccc
Confidence 9999975443
No 21
>KOG0265|consensus
Probab=99.63 E-value=7.8e-15 Score=78.92 Aligned_cols=80 Identities=21% Similarity=0.345 Sum_probs=70.5
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
++..+++| ++.|..+.|+|++.+|++|+.|..+.+|....... .+.|..+.|.+++..+++++.|.++..|
T Consensus 39 p~m~l~gh-~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~w 117 (338)
T KOG0265|consen 39 PIMLLPGH-KGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGW 117 (338)
T ss_pred hhhhcCCC-cceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEE
Confidence 44556778 99999999999999999999999999999654433 6789999999999999999999999999
Q ss_pred eCCCCeecC
Q psy16880 76 NLNSKLCDR 84 (84)
Q Consensus 76 ~~~~~~~~~ 84 (84)
|.+++++++
T Consensus 118 D~~tG~~~r 126 (338)
T KOG0265|consen 118 DAETGKRIR 126 (338)
T ss_pred ecccceeee
Confidence 999998764
No 22
>KOG0291|consensus
Probab=99.63 E-value=6.1e-15 Score=86.87 Aligned_cols=81 Identities=22% Similarity=0.399 Sum_probs=73.6
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
+|+++-.+.+| +++|.+++|+|.+..|++++.|.++++||+-.... ...+..++|+|+|+.+++...||.|.
T Consensus 467 TGqllDiLsGH-EgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqIt 545 (893)
T KOG0291|consen 467 TGQLLDILSGH-EGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQIT 545 (893)
T ss_pred cCeeeehhcCC-CCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecceEE
Confidence 68899999999 99999999999999999999999999999965532 77899999999999999999999999
Q ss_pred EEeCCCCee
Q psy16880 74 MWNLNSKLC 82 (84)
Q Consensus 74 ~~~~~~~~~ 82 (84)
+||...+..
T Consensus 546 f~d~~~~~q 554 (893)
T KOG0291|consen 546 FFDIKEAVQ 554 (893)
T ss_pred EEEhhhcee
Confidence 999876543
No 23
>KOG0275|consensus
Probab=99.62 E-value=5e-16 Score=84.82 Aligned_cols=72 Identities=36% Similarity=0.604 Sum_probs=66.3
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
++.+.|-.|+|++++|++|+-||.+.+|+..+++. ...|.|++|+.+..++++|+.||.|++|.+
T Consensus 213 KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri 292 (508)
T KOG0275|consen 213 KSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRI 292 (508)
T ss_pred ccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEE
Confidence 56678999999999999999999999999988766 678999999999999999999999999999
Q ss_pred CCCeecC
Q psy16880 78 NSKLCDR 84 (84)
Q Consensus 78 ~~~~~~~ 84 (84)
.++.|++
T Consensus 293 ~tG~ClR 299 (508)
T KOG0275|consen 293 ETGQCLR 299 (508)
T ss_pred ecchHHH
Confidence 9998864
No 24
>KOG0284|consensus
Probab=99.61 E-value=1.1e-15 Score=84.78 Aligned_cols=77 Identities=21% Similarity=0.474 Sum_probs=68.0
Q ss_pred EeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
.++.||...|.+++|+|+-+.|++++.|+.+++||..-... ...|.++.|+|....+++++.|+.+++||+++
T Consensus 174 ~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprS 253 (464)
T KOG0284|consen 174 IIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRS 253 (464)
T ss_pred HhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCC
Confidence 44556458899999999999999999999999999975544 56799999999999999999999999999999
Q ss_pred Ceec
Q psy16880 80 KLCD 83 (84)
Q Consensus 80 ~~~~ 83 (84)
+.|+
T Consensus 254 g~cl 257 (464)
T KOG0284|consen 254 GSCL 257 (464)
T ss_pred cchh
Confidence 8875
No 25
>KOG0283|consensus
Probab=99.61 E-value=2.9e-15 Score=88.05 Aligned_cols=80 Identities=23% Similarity=0.474 Sum_probs=70.6
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEcc-CCCEEEEecCCCcEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCS-KQRTLISGGDDGSICM 74 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~-~~~~~~~~~~~~~i~~ 74 (84)
.++++.+.+| .+.|+.++|+. ..+|++++.|.+++||++..... ...|+|++|+| +.+++++|+-|+.++|
T Consensus 359 ekP~~ef~GH-t~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRi 436 (712)
T KOG0283|consen 359 EKPFCEFKGH-TADILDLSWSK-NNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRL 436 (712)
T ss_pred ccchhhhhcc-chhheeccccc-CCeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeecccccceEE
Confidence 4678889999 99999999985 66888999999999999976655 78899999999 6789999999999999
Q ss_pred EeCCCCeec
Q psy16880 75 WNLNSKLCD 83 (84)
Q Consensus 75 ~~~~~~~~~ 83 (84)
|++...+.+
T Consensus 437 WsI~d~~Vv 445 (712)
T KOG0283|consen 437 WSISDKKVV 445 (712)
T ss_pred eecCcCeeE
Confidence 999877653
No 26
>PTZ00421 coronin; Provisional
Probab=99.61 E-value=3.8e-14 Score=81.91 Aligned_cols=75 Identities=19% Similarity=0.412 Sum_probs=64.4
Q ss_pred EeccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCC-------C-------CCCEEEEEEccCC-CEEEEecCCC
Q psy16880 7 TFVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKL-------C-------DSAVRSISFCSKQ-RTLISGGDDG 70 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~-------~-------~~~v~~~~~~~~~-~~~~~~~~~~ 70 (84)
.+.+| .+.|.+++|+| ++..|++++.|+.+++||+.... . ...|.+++|+|.+ ..+++++.|+
T Consensus 70 ~l~GH-~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dg 148 (493)
T PTZ00421 70 ILLGQ-EGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADM 148 (493)
T ss_pred eEeCC-CCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCC
Confidence 35678 99999999999 78899999999999999996532 1 5679999999975 6899999999
Q ss_pred cEEEEeCCCCee
Q psy16880 71 SICMWNLNSKLC 82 (84)
Q Consensus 71 ~i~~~~~~~~~~ 82 (84)
.|++||+.+++.
T Consensus 149 tVrIWDl~tg~~ 160 (493)
T PTZ00421 149 VVNVWDVERGKA 160 (493)
T ss_pred EEEEEECCCCeE
Confidence 999999987764
No 27
>PTZ00420 coronin; Provisional
Probab=99.61 E-value=7.8e-14 Score=81.56 Aligned_cols=78 Identities=17% Similarity=0.313 Sum_probs=65.7
Q ss_pred eEEEeccCCCcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCC--------C-------CCCEEEEEEccCCCEE-EEe
Q psy16880 4 IIHTFVHSNNSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKL--------C-------DSAVRSISFCSKQRTL-ISG 66 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~--------~-------~~~v~~~~~~~~~~~~-~~~ 66 (84)
++..+.+| .+.|.+++|+|+ +..|++|+.|+.+++||+.... . ...|.+++|+|++..+ +++
T Consensus 66 ~v~~L~gH-~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSg 144 (568)
T PTZ00420 66 PVIKLKGH-TSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSS 144 (568)
T ss_pred eEEEEcCC-CCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEE
Confidence 45678888 999999999996 7899999999999999996431 0 4679999999988654 688
Q ss_pred cCCCcEEEEeCCCCee
Q psy16880 67 GDDGSICMWNLNSKLC 82 (84)
Q Consensus 67 ~~~~~i~~~~~~~~~~ 82 (84)
+.|+.|++||+++++.
T Consensus 145 S~DgtIrIWDl~tg~~ 160 (568)
T PTZ00420 145 GFDSFVNIWDIENEKR 160 (568)
T ss_pred eCCCeEEEEECCCCcE
Confidence 8999999999987753
No 28
>KOG1407|consensus
Probab=99.60 E-value=7.3e-15 Score=77.96 Aligned_cols=80 Identities=21% Similarity=0.372 Sum_probs=71.5
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
+++..++.| .....|++|+|+|++|++|+.|..+.+||+...-. ..+|+.++|+-+++++++++.|..|-|=
T Consensus 180 kpv~si~AH-~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA 258 (313)
T KOG1407|consen 180 KPVQSIKAH-PSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIA 258 (313)
T ss_pred ccccccccC-CcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeE
Confidence 567788888 88889999999999999999999999999986644 7899999999999999999999999988
Q ss_pred eCCCCeec
Q psy16880 76 NLNSKLCD 83 (84)
Q Consensus 76 ~~~~~~~~ 83 (84)
+++++..+
T Consensus 259 ~vetGd~~ 266 (313)
T KOG1407|consen 259 EVETGDRV 266 (313)
T ss_pred ecccCCeE
Confidence 88877643
No 29
>KOG0291|consensus
Probab=99.59 E-value=2.6e-14 Score=84.34 Aligned_cols=78 Identities=22% Similarity=0.522 Sum_probs=69.2
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
.+...++| -..+.+++++|||+++++|+.|+.+++||...+.+ .+.|+.++|+..++.+++.+.||+++.||
T Consensus 342 YVlKQQgH-~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwD 420 (893)
T KOG0291|consen 342 YVLKQQGH-SDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWD 420 (893)
T ss_pred eeeecccc-ccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeee
Confidence 44555777 89999999999999999999999999999988665 77899999999999999999999999999
Q ss_pred CCCCee
Q psy16880 77 LNSKLC 82 (84)
Q Consensus 77 ~~~~~~ 82 (84)
+.....
T Consensus 421 lkRYrN 426 (893)
T KOG0291|consen 421 LKRYRN 426 (893)
T ss_pred ecccce
Confidence 865543
No 30
>KOG0285|consensus
Probab=99.58 E-value=1e-14 Score=80.32 Aligned_cols=79 Identities=20% Similarity=0.491 Sum_probs=70.9
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
+.++.+.+| .+.|.+++.+|.-..+++++.|..+++||+++... ...|..+.+.|....+++++.|++|++|
T Consensus 226 kvIR~YhGH-lS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlW 304 (460)
T KOG0285|consen 226 KVIRHYHGH-LSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLW 304 (460)
T ss_pred hhHHHhccc-cceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEe
Confidence 456677888 99999999999999999999999999999998765 6789999999888889999999999999
Q ss_pred eCCCCee
Q psy16880 76 NLNSKLC 82 (84)
Q Consensus 76 ~~~~~~~ 82 (84)
|++.++.
T Consensus 305 Dl~agkt 311 (460)
T KOG0285|consen 305 DLRAGKT 311 (460)
T ss_pred eeccCce
Confidence 9988764
No 31
>KOG0292|consensus
Probab=99.58 E-value=1e-14 Score=87.44 Aligned_cols=81 Identities=33% Similarity=0.651 Sum_probs=74.0
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
|.++..+..| +++|..++|+|++.+|++|+.|-.+++|.+.+... -..|+.+.|++.-+++++++.|.+|++
T Consensus 41 ~tli~rFdeH-dGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrI 119 (1202)
T KOG0292|consen 41 GTLIDRFDEH-DGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRI 119 (1202)
T ss_pred hhHHhhhhcc-CCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEE
Confidence 4456778889 99999999999999999999999999999988776 457999999999999999999999999
Q ss_pred EeCCCCeec
Q psy16880 75 WNLNSKLCD 83 (84)
Q Consensus 75 ~~~~~~~~~ 83 (84)
|+..+++++
T Consensus 120 WNwqsr~~i 128 (1202)
T KOG0292|consen 120 WNWQSRKCI 128 (1202)
T ss_pred EeccCCceE
Confidence 999998876
No 32
>KOG0285|consensus
Probab=99.57 E-value=1.6e-14 Score=79.54 Aligned_cols=80 Identities=21% Similarity=0.373 Sum_probs=72.0
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
+.+.+.+| .+.|.++++.|....|++|+.|+.+.+||+.++.. ...|..+++++..+++.+++.|+.++.||
T Consensus 143 l~rVi~gH-lgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwD 221 (460)
T KOG0285|consen 143 LYRVISGH-LGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWD 221 (460)
T ss_pred ehhhhhhc-cceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEe
Confidence 45667888 99999999999999999999999999999998876 45789999999999999999999999999
Q ss_pred CCCCeecC
Q psy16880 77 LNSKLCDR 84 (84)
Q Consensus 77 ~~~~~~~~ 84 (84)
+...+.++
T Consensus 222 Le~nkvIR 229 (460)
T KOG0285|consen 222 LEYNKVIR 229 (460)
T ss_pred chhhhhHH
Confidence 99887653
No 33
>KOG0645|consensus
Probab=99.57 E-value=9.1e-14 Score=74.10 Aligned_cols=75 Identities=15% Similarity=0.305 Sum_probs=67.5
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------CCCEEEEEEccCCCEEEEecCCCcE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------DSAVRSISFCSKQRTLISGGDDGSI 72 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~i 72 (84)
+++.++++| ++.|.+++|+++|.+|++++.|.++-+|.+..... .+.|-.+.|+|....+++++.|++|
T Consensus 96 ecv~~lEGH-EnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTI 174 (312)
T KOG0645|consen 96 ECVATLEGH-ENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTI 174 (312)
T ss_pred eEEeeeecc-ccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeE
Confidence 467889999 99999999999999999999999999999984433 5678899999999999999999999
Q ss_pred EEEeCC
Q psy16880 73 CMWNLN 78 (84)
Q Consensus 73 ~~~~~~ 78 (84)
++|+-.
T Consensus 175 k~~~~~ 180 (312)
T KOG0645|consen 175 KVYRDE 180 (312)
T ss_pred EEEeec
Confidence 999754
No 34
>KOG0316|consensus
Probab=99.57 E-value=5.1e-14 Score=74.12 Aligned_cols=82 Identities=17% Similarity=0.307 Sum_probs=66.9
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------------------------------
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------------------------------- 47 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------------------------------- 47 (84)
+|+.++.+++| .+.|..++|+.+...+++|+.|..+++||.+....
T Consensus 90 TGkv~Rr~rgH-~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvR 168 (307)
T KOG0316|consen 90 TGKVDRRFRGH-LAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVR 168 (307)
T ss_pred cCeeeeecccc-cceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEeeccCCcEE
Confidence 68999999999 99999999999999999999999999999976543
Q ss_pred --------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 48 --------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 48 --------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
..+|++++|++++...+.++.++++++.|-.+++.+
T Consensus 169 tydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL 218 (307)
T KOG0316|consen 169 TYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLL 218 (307)
T ss_pred EEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHH
Confidence 456777777777777777777777777776666543
No 35
>KOG0264|consensus
Probab=99.57 E-value=7.1e-14 Score=78.05 Aligned_cols=74 Identities=20% Similarity=0.480 Sum_probs=63.3
Q ss_pred eEEEeccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCC-CEEEEecCCCcEE
Q psy16880 4 IIHTFVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQ-RTLISGGDDGSIC 73 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~-~~~~~~~~~~~i~ 73 (84)
+.+..+.| .+.|.|++|+| ++..|++|+.|++|.+||++.... +..|..+.|+|+. ..+++++.|+.+.
T Consensus 264 ~~~~~~ah-~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~ 342 (422)
T KOG0264|consen 264 PSHSVKAH-SAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLN 342 (422)
T ss_pred Cccccccc-CCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEE
Confidence 44455677 89999999999 567889999999999999987765 7789999999964 6778888999999
Q ss_pred EEeCC
Q psy16880 74 MWNLN 78 (84)
Q Consensus 74 ~~~~~ 78 (84)
+||+.
T Consensus 343 vWDls 347 (422)
T KOG0264|consen 343 VWDLS 347 (422)
T ss_pred EEecc
Confidence 99985
No 36
>KOG0284|consensus
Probab=99.56 E-value=1.6e-14 Score=80.28 Aligned_cols=78 Identities=18% Similarity=0.342 Sum_probs=70.7
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
..+.+.+| .-.|.+++|+|...++++++.|..|++||.+++.. .+.|..+.|.|+++++++++.|..++++|
T Consensus 214 ee~vL~GH-gwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~D 292 (464)
T KOG0284|consen 214 EERVLRGH-GWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFD 292 (464)
T ss_pred hhheeccC-CCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEe
Confidence 34566888 88899999999999999999999999999998877 78899999999999999999999999999
Q ss_pred CCCCee
Q psy16880 77 LNSKLC 82 (84)
Q Consensus 77 ~~~~~~ 82 (84)
+++.+.
T Consensus 293 iR~mkE 298 (464)
T KOG0284|consen 293 IRTMKE 298 (464)
T ss_pred hhHhHH
Confidence 986553
No 37
>KOG1273|consensus
Probab=99.55 E-value=6.6e-14 Score=76.17 Aligned_cols=68 Identities=18% Similarity=0.308 Sum_probs=62.5
Q ss_pred EEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
..++.|++-|.+|+.|+.+|.+.+||..+... -.+|++++|+++++.+++++.|..|.+||+..+.++
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l 100 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPL 100 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCce
Confidence 67999999999999999999999999988766 568999999999999999999999999999887654
No 38
>KOG4283|consensus
Probab=99.54 E-value=7.7e-14 Score=75.44 Aligned_cols=80 Identities=28% Similarity=0.515 Sum_probs=70.0
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCC-EEEEeCCCCcEEEEeCCCCCC----------------------CCCEEEEEEc
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQH-TLISGGDDGSICMWNLNSKLC----------------------DSAVRSISFC 57 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~~~~d~~~~~~----------------------~~~v~~~~~~ 57 (84)
+|.+-+++.+| .+.|.++.|+|... .|++|+.|+.+++||++.... .+.+.+++|.
T Consensus 177 SGs~sH~LsGH-r~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~t 255 (397)
T KOG4283|consen 177 SGSFSHTLSGH-RDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWT 255 (397)
T ss_pred CCcceeeeccc-cCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeec
Confidence 57788999999 99999999999776 578999999999999986522 5678999999
Q ss_pred cCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 58 SKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
.++..+++++.|..+++|+..++.
T Consensus 256 Sd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 256 SDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred ccchhhhhccCccceEEeecccCc
Confidence 999999999999999999987654
No 39
>KOG0643|consensus
Probab=99.53 E-value=4.7e-13 Score=71.50 Aligned_cols=80 Identities=24% Similarity=0.405 Sum_probs=68.2
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------------------------------
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------------------------------- 47 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------------------------------- 47 (84)
.|+.+-++++| .+.|++++.+.+...+++|+.|..+++||..+++.
T Consensus 41 nGerlGty~GH-tGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~ 119 (327)
T KOG0643|consen 41 NGERLGTYDGH-TGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYT 119 (327)
T ss_pred CCceeeeecCC-CceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcc
Confidence 47888999999 99999999999999999999999999999998866
Q ss_pred ---------------------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 48 ---------------------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 48 ---------------------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
.+.+...-|.|-+..+++|..+|.|..||.++++
T Consensus 120 ~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~ 180 (327)
T KOG0643|consen 120 CFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGK 180 (327)
T ss_pred eEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCc
Confidence 3456667777777788888888888888887764
No 40
>KOG0647|consensus
Probab=99.53 E-value=1.9e-13 Score=73.83 Aligned_cols=71 Identities=21% Similarity=0.419 Sum_probs=63.2
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCC--EEEEecCCCcEEEEeCCCCeec
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQR--TLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
.++|++++|+.+|..+++|+.|+.+++||+..... ...|..+.|-+... .+++|+.|.+++.||++...++
T Consensus 72 ~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv 150 (347)
T KOG0647|consen 72 DGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPV 150 (347)
T ss_pred CCCeEEEEEccCCceEEeeccCCceEEEEccCCCeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCee
Confidence 88999999999999999999999999999988766 67889999876554 8899999999999999976654
No 41
>KOG0283|consensus
Probab=99.53 E-value=1.8e-13 Score=80.78 Aligned_cols=78 Identities=17% Similarity=0.389 Sum_probs=69.0
Q ss_pred ceEEEeccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
.++..| .| .+-|+|++|+| |.++|++|+.|+.+++|++..... +..|++++|.|+|...+.|+.+|.+++|
T Consensus 401 ~CL~~F-~H-ndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY 478 (712)
T KOG0283|consen 401 ECLKVF-SH-NDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFY 478 (712)
T ss_pred ceeeEE-ec-CCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEE
Confidence 455555 35 89999999999 789999999999999999987776 7789999999999999999999999999
Q ss_pred eCCCCee
Q psy16880 76 NLNSKLC 82 (84)
Q Consensus 76 ~~~~~~~ 82 (84)
+....+.
T Consensus 479 ~t~~lk~ 485 (712)
T KOG0283|consen 479 DTEGLKL 485 (712)
T ss_pred EccCCeE
Confidence 9887654
No 42
>KOG0276|consensus
Probab=99.53 E-value=9e-14 Score=80.92 Aligned_cols=80 Identities=26% Similarity=0.472 Sum_probs=71.1
Q ss_pred ceEEEeccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEcc--CCCEEEEecCCCcE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCS--KQRTLISGGDDGSI 72 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~--~~~~~~~~~~~~~i 72 (84)
.+.+++++| ..-|.+++|+| +.+.+++++.|+++++|.+....+ +..|.++.|-+ +.+++++++.|.++
T Consensus 131 a~~qtfeGH-~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~ti 209 (794)
T KOG0276|consen 131 ACEQTFEGH-EHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTI 209 (794)
T ss_pred eeeeEEcCc-ceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceE
Confidence 367899999 99999999999 789999999999999999976655 67899999976 45799999999999
Q ss_pred EEEeCCCCeec
Q psy16880 73 CMWNLNSKLCD 83 (84)
Q Consensus 73 ~~~~~~~~~~~ 83 (84)
++||..++.|+
T Consensus 210 KvWDyQtk~CV 220 (794)
T KOG0276|consen 210 KVWDYQTKSCV 220 (794)
T ss_pred EEeecchHHHH
Confidence 99999998776
No 43
>KOG0316|consensus
Probab=99.53 E-value=1.9e-13 Score=72.04 Aligned_cols=79 Identities=23% Similarity=0.470 Sum_probs=73.0
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
.|.+++++.+| ...|...+.+.+...+++++.|..+.+||+.+++. ..+|..++|..+...+++++.|..++
T Consensus 48 rg~liktYsgh-G~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r 126 (307)
T KOG0316|consen 48 RGALIKTYSGH-GHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVR 126 (307)
T ss_pred ccceeeeecCC-CceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeE
Confidence 37789999999 99999999999999999999999999999999887 56899999999999999999999999
Q ss_pred EEeCCCC
Q psy16880 74 MWNLNSK 80 (84)
Q Consensus 74 ~~~~~~~ 80 (84)
+||.++.
T Consensus 127 ~wDCRS~ 133 (307)
T KOG0316|consen 127 LWDCRSR 133 (307)
T ss_pred EEEcccC
Confidence 9998754
No 44
>KOG0295|consensus
Probab=99.52 E-value=3.6e-13 Score=74.16 Aligned_cols=77 Identities=23% Similarity=0.524 Sum_probs=70.8
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
+|.++.++.+| .+.|..++|+|.|++++++..|+++++||+++... +.-+.++.|+.+..++++|+.|.+++
T Consensus 323 tg~cL~tL~gh-dnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~K 401 (406)
T KOG0295|consen 323 TGMCLFTLVGH-DNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVK 401 (406)
T ss_pred CCeEEEEEecc-cceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceee
Confidence 57899999999 99999999999999999999999999999998766 56689999999999999999999999
Q ss_pred EEeCC
Q psy16880 74 MWNLN 78 (84)
Q Consensus 74 ~~~~~ 78 (84)
+|..+
T Consensus 402 vwEcr 406 (406)
T KOG0295|consen 402 VWECR 406 (406)
T ss_pred eeecC
Confidence 99753
No 45
>KOG0319|consensus
Probab=99.52 E-value=2.6e-13 Score=79.77 Aligned_cols=81 Identities=27% Similarity=0.552 Sum_probs=74.0
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
+.++..+.+| +-.|++++|++..+.+++++.|.++++|.+.+..+ ...|...+|-.+++.+++++.||.|++
T Consensus 495 ~~l~~vLsGH-~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKl 573 (775)
T KOG0319|consen 495 LRLLGVLSGH-TRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKL 573 (775)
T ss_pred ceEEEEeeCC-ccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEE
Confidence 4567889999 99999999999999999999999999999988877 567888999999999999999999999
Q ss_pred EeCCCCeec
Q psy16880 75 WNLNSKLCD 83 (84)
Q Consensus 75 ~~~~~~~~~ 83 (84)
|+++++.|+
T Consensus 574 Wnikt~eC~ 582 (775)
T KOG0319|consen 574 WNIKTNECE 582 (775)
T ss_pred Eeccchhhh
Confidence 999998875
No 46
>KOG0273|consensus
Probab=99.52 E-value=2.1e-13 Score=77.00 Aligned_cols=80 Identities=23% Similarity=0.501 Sum_probs=69.4
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------------------------------
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------------------------------- 47 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------------------------------- 47 (84)
|.++.++-.| .++|++++|+..|.++++++-|+...+||..++..
T Consensus 266 G~l~~tl~~H-kgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~ 344 (524)
T KOG0273|consen 266 GNLISTLGQH-KGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVC 344 (524)
T ss_pred chhhhhhhcc-CCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEE
Confidence 5556667677 99999999999999999999999999999965533
Q ss_pred --------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 48 --------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 48 --------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
.+.|.++.|.|.+..+++++.|+++++|......+
T Consensus 345 kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~ 393 (524)
T KOG0273|consen 345 KVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNS 393 (524)
T ss_pred EecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcc
Confidence 57899999999999999999999999998765543
No 47
>KOG1446|consensus
Probab=99.52 E-value=4.9e-13 Score=72.22 Aligned_cols=78 Identities=22% Similarity=0.325 Sum_probs=67.7
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
.+.++-+.|| ...|..++.+|-+..+++++.|..+++||++.... -..-...+|.|+|-.++.+.....|++||
T Consensus 90 NkylRYF~GH-~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD 168 (311)
T KOG1446|consen 90 NKYLRYFPGH-KKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIKLYD 168 (311)
T ss_pred CceEEEcCCC-CceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEEEEE
Confidence 4678999999 99999999999999999999999999999996655 23345688999999999998888999999
Q ss_pred CCCC
Q psy16880 77 LNSK 80 (84)
Q Consensus 77 ~~~~ 80 (84)
++.-
T Consensus 169 ~Rs~ 172 (311)
T KOG1446|consen 169 LRSF 172 (311)
T ss_pred eccc
Confidence 8753
No 48
>KOG0318|consensus
Probab=99.51 E-value=9.5e-13 Score=75.35 Aligned_cols=81 Identities=16% Similarity=0.412 Sum_probs=71.2
Q ss_pred CCceEEEec---cCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------------------------------
Q psy16880 1 DGSIIHTFV---HSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------------------------------ 47 (84)
Q Consensus 1 ~g~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------------------------------ 47 (84)
+|+.+-.++ .| ++.|++++|+|++..+++++.|..+++||+.+...
T Consensus 221 tge~vg~l~~~~aH-kGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~ 299 (603)
T KOG0318|consen 221 TGEKVGELEDSDAH-KGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLS 299 (603)
T ss_pred CccEEEEecCCCCc-cccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcC
Confidence 466777777 67 99999999999999999999999999999987654
Q ss_pred --------------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 48 --------------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 48 --------------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
...|+++..+|++..+++++.||.|.-|+...+..
T Consensus 300 G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~ 354 (603)
T KOG0318|consen 300 GTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTS 354 (603)
T ss_pred cEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccc
Confidence 56799999999999999999999999999876653
No 49
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.51 E-value=1.1e-12 Score=79.44 Aligned_cols=79 Identities=24% Similarity=0.483 Sum_probs=67.6
Q ss_pred CceEEEeccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEc-cCCCEEEEecCCCcEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFC-SKQRTLISGGDDGSIC 73 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~-~~~~~~~~~~~~~~i~ 73 (84)
++.+..+++| .+.|.+++|+| ++..|++++.|+.+++||+..... ...+.++.|. +++..+++++.|+.|+
T Consensus 565 ~~~~~~~~~H-~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~ 643 (793)
T PLN00181 565 SQLVTEMKEH-EKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFGSADHKVY 643 (793)
T ss_pred CeEEEEecCC-CCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeEE
Confidence 5667778888 99999999997 788999999999999999986544 4578889995 5789999999999999
Q ss_pred EEeCCCCe
Q psy16880 74 MWNLNSKL 81 (84)
Q Consensus 74 ~~~~~~~~ 81 (84)
+||+++.+
T Consensus 644 iwD~~~~~ 651 (793)
T PLN00181 644 YYDLRNPK 651 (793)
T ss_pred EEECCCCC
Confidence 99997653
No 50
>KOG0276|consensus
Probab=99.51 E-value=1.7e-13 Score=79.79 Aligned_cols=77 Identities=27% Similarity=0.510 Sum_probs=68.6
Q ss_pred eEEEeccCCCcCEEEEEEccCC--CEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQ--HTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
+..++++| +..|.+++|.+.+ .++++|+.|..+++||+++..+ .+.|+.+.|+|.-+++++|+.||++++
T Consensus 175 ~nfTl~gH-ekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvri 253 (794)
T KOG0276|consen 175 PNFTLEGH-EKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRI 253 (794)
T ss_pred Cceeeecc-ccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEE
Confidence 55788999 9999999999854 6999999999999999998766 568999999999999999999999999
Q ss_pred EeCCCCe
Q psy16880 75 WNLNSKL 81 (84)
Q Consensus 75 ~~~~~~~ 81 (84)
|...+-+
T Consensus 254 Whs~Ty~ 260 (794)
T KOG0276|consen 254 WNSKTYK 260 (794)
T ss_pred ecCccee
Confidence 9876644
No 51
>KOG2394|consensus
Probab=99.50 E-value=2.2e-13 Score=78.13 Aligned_cols=71 Identities=11% Similarity=0.407 Sum_probs=64.3
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
++.|..++|+|++++|++.+.|+.+++||..+... -+...|++|+|+++++++|+.|..+.||.+..++.+
T Consensus 290 ~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVV 367 (636)
T KOG2394|consen 290 EGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVV 367 (636)
T ss_pred cccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEE
Confidence 56789999999999999999999999999987666 467899999999999999999999999999877754
No 52
>KOG0282|consensus
Probab=99.50 E-value=2.7e-14 Score=80.51 Aligned_cols=80 Identities=25% Similarity=0.438 Sum_probs=71.6
Q ss_pred ceEEEeccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
+.++.+.+| +..|.++.|.| .+.+|++++.|+.+.+|++-.... ...|..++|++++..+++++.|+.++
T Consensus 205 k~~~~~~gH-~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lK 283 (503)
T KOG0282|consen 205 KLSHNLSGH-TKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLK 283 (503)
T ss_pred hheeeccCC-ccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeee
Confidence 356788899 99999999999 889999999999999999966322 67899999999999999999999999
Q ss_pred EEeCCCCeec
Q psy16880 74 MWNLNSKLCD 83 (84)
Q Consensus 74 ~~~~~~~~~~ 83 (84)
+||+++++++
T Consensus 284 lwDtETG~~~ 293 (503)
T KOG0282|consen 284 LWDTETGQVL 293 (503)
T ss_pred eeccccceEE
Confidence 9999999875
No 53
>KOG0302|consensus
Probab=99.50 E-value=1.4e-13 Score=76.17 Aligned_cols=73 Identities=30% Similarity=0.566 Sum_probs=63.4
Q ss_pred eccCCCcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 8 FVHSNNSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 8 ~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
+-+| +..|..+.|+|. ...|++++.|+++++||++.++. ++.|..++|+.+..++++|+.+|+++|||+
T Consensus 253 f~gH-~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDL 331 (440)
T KOG0302|consen 253 FTGH-TKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDL 331 (440)
T ss_pred cccc-ccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEh
Confidence 3456 888999999995 56899999999999999998744 678999999998889999999999999999
Q ss_pred CCCe
Q psy16880 78 NSKL 81 (84)
Q Consensus 78 ~~~~ 81 (84)
+.-+
T Consensus 332 R~~~ 335 (440)
T KOG0302|consen 332 RQFK 335 (440)
T ss_pred hhcc
Confidence 8543
No 54
>KOG0269|consensus
Probab=99.49 E-value=2.6e-13 Score=80.18 Aligned_cols=74 Identities=20% Similarity=0.464 Sum_probs=64.4
Q ss_pred EeccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 7 TFVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
++.+. ...|..++|+| .+..|+++...|.+.+||++.+.. .+.|.++.|+|++.++++|++|+.++||+.
T Consensus 171 t~~~n-SESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~ 249 (839)
T KOG0269|consen 171 TFRSN-SESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDM 249 (839)
T ss_pred ccccc-chhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEec
Confidence 33443 56789999999 578999999999999999997766 889999999999999999999999999998
Q ss_pred CCCe
Q psy16880 78 NSKL 81 (84)
Q Consensus 78 ~~~~ 81 (84)
.+.+
T Consensus 250 t~~~ 253 (839)
T KOG0269|consen 250 TDSR 253 (839)
T ss_pred cCCC
Confidence 7544
No 55
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.49 E-value=8.5e-13 Score=70.01 Aligned_cols=76 Identities=25% Similarity=0.486 Sum_probs=65.9
Q ss_pred EEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
++.+++| .+.|.+++|+|+++.+++++.++.+.+|++..... ...+..+.|.|++..+++++.++.+.+|+.
T Consensus 2 ~~~~~~h-~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~ 80 (289)
T cd00200 2 RRTLKGH-TGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDL 80 (289)
T ss_pred chHhccc-CCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEc
Confidence 3456778 89999999999999999999999999999976543 456779999999989999999999999999
Q ss_pred CCCe
Q psy16880 78 NSKL 81 (84)
Q Consensus 78 ~~~~ 81 (84)
.+++
T Consensus 81 ~~~~ 84 (289)
T cd00200 81 ETGE 84 (289)
T ss_pred Cccc
Confidence 8743
No 56
>KOG0277|consensus
Probab=99.48 E-value=1.1e-12 Score=69.66 Aligned_cols=79 Identities=20% Similarity=0.410 Sum_probs=68.3
Q ss_pred CceEEEeccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEcc-CCCEEEEecCCCcE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCS-KQRTLISGGDDGSI 72 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~-~~~~~~~~~~~~~i 72 (84)
++.++++.+| .+.|....|+| .+.++++++.|+.+++||++.... ..++.+..|+. +..++++++.|+.|
T Consensus 137 ~~Sv~Tf~gh-~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~v 215 (311)
T KOG0277|consen 137 PNSVQTFNGH-NSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLV 215 (311)
T ss_pred CcceEeecCC-ccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceE
Confidence 4568889999 99999999999 678999999999999999986644 55888999986 56788999999999
Q ss_pred EEEeCCCCe
Q psy16880 73 CMWNLNSKL 81 (84)
Q Consensus 73 ~~~~~~~~~ 81 (84)
+.||+++.+
T Consensus 216 r~wDir~~r 224 (311)
T KOG0277|consen 216 RGWDIRNLR 224 (311)
T ss_pred EEEehhhcc
Confidence 999998754
No 57
>KOG1274|consensus
Probab=99.48 E-value=9.4e-13 Score=78.93 Aligned_cols=75 Identities=19% Similarity=0.410 Sum_probs=65.3
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------------------------------------
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------------------------------------ 47 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------------------------------------ 47 (84)
-...+++| +++|.+++|+|.+.+|++.+.+|.+.+||+..+..
T Consensus 130 ~~~~lrgh-~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~ 208 (933)
T KOG1274|consen 130 QEKVLRGH-DAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPV 208 (933)
T ss_pred hheeeccc-CCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeecc
Confidence 34577888 99999999999999999999999999999986644
Q ss_pred -----------------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 48 -----------------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 48 -----------------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
...++.++|+|+|+++++++.+|.|.|||..+
T Consensus 209 d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 209 DNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred CCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEeccc
Confidence 33478899999999999999999999998874
No 58
>KOG1034|consensus
Probab=99.48 E-value=2.3e-13 Score=74.24 Aligned_cols=78 Identities=26% Similarity=0.541 Sum_probs=69.2
Q ss_pred CceEEEeccCCCcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC----------CCCEEEEEEccCCCEEEEecCCC
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC----------DSAVRSISFCSKQRTLISGGDDG 70 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~ 70 (84)
+++...+.+| ...|..++++|. .+++++++.|..+++|++++... +..|..+.|++++..+++++.|.
T Consensus 125 ~~~~~~~~gh-G~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDh 203 (385)
T KOG1034|consen 125 GQCSKNYRGH-GGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDH 203 (385)
T ss_pred hhhccceecc-CccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcc
Confidence 4556677888 899999999995 57999999999999999998766 67899999999999999999999
Q ss_pred cEEEEeCCCC
Q psy16880 71 SICMWNLNSK 80 (84)
Q Consensus 71 ~i~~~~~~~~ 80 (84)
.+++|+++.+
T Consensus 204 slk~W~l~~~ 213 (385)
T KOG1034|consen 204 SLKLWRLNVK 213 (385)
T ss_pred eEEEEecChh
Confidence 9999998743
No 59
>KOG1539|consensus
Probab=99.48 E-value=2.6e-13 Score=80.73 Aligned_cols=75 Identities=24% Similarity=0.418 Sum_probs=67.5
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCC-CcEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDD-GSICM 74 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~-~~i~~ 74 (84)
.+.++.+.+| .+.|.+++|+|+|+.+++++.|+++++||+.++.. ...+..+.|+|++.++++...| .-|.+
T Consensus 566 ~kvvR~f~gh-~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hvd~~gIyl 644 (910)
T KOG1539|consen 566 RKVVREFWGH-GNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHVDQNGIYL 644 (910)
T ss_pred hhhhHHhhcc-ccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEecCceEEE
Confidence 3567788999 99999999999999999999999999999998877 7888999999999999999887 56999
Q ss_pred EeC
Q psy16880 75 WNL 77 (84)
Q Consensus 75 ~~~ 77 (84)
|.-
T Consensus 645 WsN 647 (910)
T KOG1539|consen 645 WSN 647 (910)
T ss_pred EEc
Confidence 953
No 60
>KOG0264|consensus
Probab=99.47 E-value=5e-13 Score=74.76 Aligned_cols=77 Identities=21% Similarity=0.429 Sum_probs=65.2
Q ss_pred eEEEeccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCC--CC-------CCCEEEEEEccC-CCEEEEecCCCcE
Q psy16880 4 IIHTFVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSK--LC-------DSAVRSISFCSK-QRTLISGGDDGSI 72 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~--~~-------~~~v~~~~~~~~-~~~~~~~~~~~~i 72 (84)
+...+.+| .+.|..++|++ +..+|.+++.++.+.+||.+.. +. .+.+.+++|.|. +..+++++.|+++
T Consensus 219 p~~~~~~h-~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV 297 (422)
T KOG0264|consen 219 PKTIFSGH-EDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTV 297 (422)
T ss_pred ceEEeecC-CcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcE
Confidence 34566788 99999999999 5678999999999999999952 22 678999999994 5678899999999
Q ss_pred EEEeCCCCe
Q psy16880 73 CMWNLNSKL 81 (84)
Q Consensus 73 ~~~~~~~~~ 81 (84)
.+||+|+.+
T Consensus 298 ~LwDlRnL~ 306 (422)
T KOG0264|consen 298 ALWDLRNLN 306 (422)
T ss_pred EEeechhcc
Confidence 999998764
No 61
>KOG0973|consensus
Probab=99.47 E-value=7.5e-13 Score=80.01 Aligned_cols=79 Identities=23% Similarity=0.355 Sum_probs=68.2
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------------------------CCCEEEEEEcc
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------------------------DSAVRSISFCS 58 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------------------------~~~v~~~~~~~ 58 (84)
.+-++..| .+.|.|+.|+++|++|++|+.|+.+.+|+...... .+.|..++|+|
T Consensus 61 ~l~~m~~h-~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp 139 (942)
T KOG0973|consen 61 HLCTMDDH-DGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP 139 (942)
T ss_pred hheeeccc-cCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC
Confidence 44566778 99999999999999999999999999999873100 67899999999
Q ss_pred CCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 59 KQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 59 ~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
++.++++++.|+.|.+|+.++-+++
T Consensus 140 ~~~~lvS~s~DnsViiwn~~tF~~~ 164 (942)
T KOG0973|consen 140 DDSLLVSVSLDNSVIIWNAKTFELL 164 (942)
T ss_pred CccEEEEecccceEEEEccccceee
Confidence 9999999999999999998876543
No 62
>KOG0640|consensus
Probab=99.46 E-value=8e-13 Score=72.06 Aligned_cols=79 Identities=25% Similarity=0.496 Sum_probs=70.6
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
.++++..| .++|.++.|+|....|++++.|+.+++||...... ...|.+++|+|.|.+++.+.....+++
T Consensus 164 vIRTlYDH-~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rl 242 (430)
T KOG0640|consen 164 VIRTLYDH-VDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRL 242 (430)
T ss_pred eEeehhhc-cCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeE
Confidence 46778888 99999999999999999999999999999976544 458999999999999999998899999
Q ss_pred EeCCCCeec
Q psy16880 75 WNLNSKLCD 83 (84)
Q Consensus 75 ~~~~~~~~~ 83 (84)
||+++-+|.
T Consensus 243 Ydv~T~Qcf 251 (430)
T KOG0640|consen 243 YDVNTYQCF 251 (430)
T ss_pred EeccceeEe
Confidence 999987763
No 63
>KOG0293|consensus
Probab=99.46 E-value=1.1e-12 Score=73.60 Aligned_cols=76 Identities=22% Similarity=0.496 Sum_probs=68.4
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
++.+++.+| ..+|..+.|+|+.+++++++.+..+.+||..++.. ...+.+.+|.|++..+++|+.|+.|.+
T Consensus 260 kl~~tlvgh-~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~ 338 (519)
T KOG0293|consen 260 KLKKTLVGH-SQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIM 338 (519)
T ss_pred eeeeeeecc-cCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEE
Confidence 356788899 89999999999999999999999999999998866 357899999999999999999999999
Q ss_pred EeCCC
Q psy16880 75 WNLNS 79 (84)
Q Consensus 75 ~~~~~ 79 (84)
||+..
T Consensus 339 wdlDg 343 (519)
T KOG0293|consen 339 WDLDG 343 (519)
T ss_pred ecCCc
Confidence 99764
No 64
>KOG0275|consensus
Probab=99.46 E-value=1.1e-13 Score=75.92 Aligned_cols=83 Identities=23% Similarity=0.467 Sum_probs=73.5
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
+|+|++.++..|...|.++.|+.+++.+++++.|..+++.-+..++. .+.|....|.++|..+++++.|++++
T Consensus 294 tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvk 373 (508)
T KOG0275|consen 294 TGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVK 373 (508)
T ss_pred cchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEE
Confidence 57788888743389999999999999999999999999998887766 56789999999999999999999999
Q ss_pred EEeCCCCeec
Q psy16880 74 MWNLNSKLCD 83 (84)
Q Consensus 74 ~~~~~~~~~~ 83 (84)
+|+..+.+|+
T Consensus 374 vW~~KtteC~ 383 (508)
T KOG0275|consen 374 VWHGKTTECL 383 (508)
T ss_pred EecCcchhhh
Confidence 9999887765
No 65
>KOG0313|consensus
Probab=99.46 E-value=1.3e-12 Score=72.30 Aligned_cols=78 Identities=21% Similarity=0.344 Sum_probs=70.3
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
+.++-.+++| ..+|.++-|++ ...+++++.|..++.||+..+.. +....++.++|....+++++.|..+++|
T Consensus 250 r~P~vtl~GH-t~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~ 327 (423)
T KOG0313|consen 250 RTPLVTLEGH-TEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLW 327 (423)
T ss_pred cCceEEeccc-ccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeec
Confidence 4577889999 99999999997 77889999999999999988766 6789999999999999999999999999
Q ss_pred eCCCCe
Q psy16880 76 NLNSKL 81 (84)
Q Consensus 76 ~~~~~~ 81 (84)
|++++.
T Consensus 328 DPR~~~ 333 (423)
T KOG0313|consen 328 DPRTGD 333 (423)
T ss_pred CCCCCC
Confidence 998753
No 66
>KOG0645|consensus
Probab=99.46 E-value=4.1e-12 Score=67.96 Aligned_cols=74 Identities=22% Similarity=0.398 Sum_probs=65.1
Q ss_pred eEEEeccCCCcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC-----------CCCEEEEEEccCCCEEEEecCCCc
Q psy16880 4 IIHTFVHSNNSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC-----------DSAVRSISFCSKQRTLISGGDDGS 71 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~~ 71 (84)
.++.+++| ++.+..++|+|. |..|++++.|..+++|+...+.. ...|+.++|+|.++++++++.|.+
T Consensus 6 ~~~~~~gh-~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t 84 (312)
T KOG0645|consen 6 LEQKLSGH-KDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT 84 (312)
T ss_pred eEEeecCC-CCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce
Confidence 45678888 999999999997 88999999999999999975222 568999999999999999999999
Q ss_pred EEEEeCC
Q psy16880 72 ICMWNLN 78 (84)
Q Consensus 72 i~~~~~~ 78 (84)
.-+|.-.
T Consensus 85 ~~Iw~k~ 91 (312)
T KOG0645|consen 85 VVIWKKE 91 (312)
T ss_pred EEEeecC
Confidence 9999654
No 67
>KOG0265|consensus
Probab=99.45 E-value=7.1e-13 Score=71.55 Aligned_cols=81 Identities=26% Similarity=0.471 Sum_probs=69.3
Q ss_pred CCceEEEeccCCCcCEEEEEEccCC-CEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQ-HTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
+|+..+.+++| .+.|..+.-...+ .++.+++.|+++++||++.... +-+++++.|...+..+.+++-|+.|+
T Consensus 121 tG~~~rk~k~h-~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ik 199 (338)
T KOG0265|consen 121 TGKRIRKHKGH-TSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGIDNDIK 199 (338)
T ss_pred cceeeehhccc-cceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeeccccCcee
Confidence 58889999999 9999998755544 5778999999999999996554 55799999999999999999999999
Q ss_pred EEeCCCCee
Q psy16880 74 MWNLNSKLC 82 (84)
Q Consensus 74 ~~~~~~~~~ 82 (84)
+||++....
T Consensus 200 vWd~r~~d~ 208 (338)
T KOG0265|consen 200 VWDLRKNDG 208 (338)
T ss_pred eeccccCcc
Confidence 999976654
No 68
>KOG0278|consensus
Probab=99.45 E-value=1.5e-12 Score=69.27 Aligned_cols=34 Identities=24% Similarity=0.482 Sum_probs=29.7
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
.++|.++.|+|+|...++|+.||+|++|....++
T Consensus 267 ~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 267 FGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred CCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence 4679999999999999999999999999876554
No 69
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.44 E-value=1.2e-11 Score=65.59 Aligned_cols=80 Identities=29% Similarity=0.623 Sum_probs=67.4
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
++....+..| ...+.+++|+|++.++++++.++.+.+||++.... ...+.++.|+|++..+++++.++.+.+
T Consensus 125 ~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i 203 (289)
T cd00200 125 GKCLTTLRGH-TDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKL 203 (289)
T ss_pred cEEEEEeccC-CCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEE
Confidence 4556666667 88899999999988998888899999999975544 457999999999988988888999999
Q ss_pred EeCCCCee
Q psy16880 75 WNLNSKLC 82 (84)
Q Consensus 75 ~~~~~~~~ 82 (84)
||++.++.
T Consensus 204 ~d~~~~~~ 211 (289)
T cd00200 204 WDLSTGKC 211 (289)
T ss_pred EECCCCce
Confidence 99986554
No 70
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.44 E-value=1e-12 Score=51.74 Aligned_cols=39 Identities=33% Similarity=0.669 Sum_probs=37.0
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEe
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWN 41 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d 41 (84)
|++++++++| .+.|.+|+|+|++..+++++.|+.+++||
T Consensus 1 g~~~~~~~~h-~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGH-SSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESS-SSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCC-CCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 5788999999 99999999999999999999999999997
No 71
>KOG0319|consensus
Probab=99.44 E-value=9.8e-13 Score=77.45 Aligned_cols=75 Identities=15% Similarity=0.417 Sum_probs=67.4
Q ss_pred ccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 9 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
..| ...|.+++++|+.+++++|+.|...++|++..... ...+.++.|+|....+++++.|.++++|.+.+..
T Consensus 460 ~aH-dKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fS 538 (775)
T KOG0319|consen 460 RAH-DKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFS 538 (775)
T ss_pred Hhh-cccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccce
Confidence 346 88999999999999999999999999999985544 6789999999999999999999999999999887
Q ss_pred ecC
Q psy16880 82 CDR 84 (84)
Q Consensus 82 ~~~ 84 (84)
|++
T Consensus 539 Clk 541 (775)
T KOG0319|consen 539 CLK 541 (775)
T ss_pred eee
Confidence 753
No 72
>KOG0647|consensus
Probab=99.43 E-value=2.4e-12 Score=69.64 Aligned_cols=70 Identities=21% Similarity=0.505 Sum_probs=61.2
Q ss_pred CcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 13 NSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 13 ~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
.+.|.+++|+|. ..++++++.|+.|++|++..... .++|.+++|+.++..+++++.|+.+++||+.+++.
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~ 106 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQV 106 (347)
T ss_pred ccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCe
Confidence 567999999994 45677999999999999976322 78999999999999999999999999999998865
No 73
>KOG0289|consensus
Probab=99.43 E-value=2.2e-12 Score=72.59 Aligned_cols=67 Identities=28% Similarity=0.511 Sum_probs=61.1
Q ss_pred CEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 15 AVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
.+.+..|+|||-.|.+|..|+.+++||+..+.. .+.|..++|+.+|.++++.+.|+.+++||++..+
T Consensus 349 ~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~ 422 (506)
T KOG0289|consen 349 EYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLK 422 (506)
T ss_pred eeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhc
Confidence 378999999999999999999999999986655 7789999999999999999999999999998654
No 74
>KOG0772|consensus
Probab=99.43 E-value=3.8e-13 Score=76.96 Aligned_cols=67 Identities=28% Similarity=0.467 Sum_probs=59.4
Q ss_pred CEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 15 AVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
++..++|++++..+++|..||+|.+|+...... ...|+++.|+++++.+++-+.|+.+++||++..+
T Consensus 319 ~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k 397 (641)
T KOG0772|consen 319 PVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK 397 (641)
T ss_pred CceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccc
Confidence 467889999999999999999999999754433 5589999999999999999999999999998654
No 75
>KOG0640|consensus
Probab=99.42 E-value=2.2e-12 Score=70.37 Aligned_cols=73 Identities=22% Similarity=0.494 Sum_probs=66.2
Q ss_pred cCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy16880 10 HSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 10 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 80 (84)
+| .+.|.++.+++.+++.++++.||.+++||--...+ ...|+...|..+++++++.+.|..+++|.+.++
T Consensus 259 qh-t~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~ 337 (430)
T KOG0640|consen 259 QH-TGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTG 337 (430)
T ss_pred cc-ccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCC
Confidence 45 88999999999999999999999999999866554 678999999999999999999999999999988
Q ss_pred eec
Q psy16880 81 LCD 83 (84)
Q Consensus 81 ~~~ 83 (84)
.++
T Consensus 338 R~l 340 (430)
T KOG0640|consen 338 RML 340 (430)
T ss_pred ceE
Confidence 765
No 76
>KOG0313|consensus
Probab=99.42 E-value=1.5e-12 Score=72.07 Aligned_cols=78 Identities=24% Similarity=0.462 Sum_probs=64.8
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------CCCEEEEEEccCC-CEEEEecCCC
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------DSAVRSISFCSKQ-RTLISGGDDG 70 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~-~~~~~~~~~~ 70 (84)
|....++.+ ...+++++++|...++++|+.+..+++||.+++.. .+.|..+.|+|.. .++++++.|+
T Consensus 291 g~~~~~~~~--~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~ 368 (423)
T KOG0313|consen 291 GGLKSTLTT--NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDN 368 (423)
T ss_pred ccceeeeec--CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCC
Confidence 344444444 56789999999999999999999999999987754 6689999999954 5778999999
Q ss_pred cEEEEeCCCCe
Q psy16880 71 SICMWNLNSKL 81 (84)
Q Consensus 71 ~i~~~~~~~~~ 81 (84)
++++||+++.+
T Consensus 369 t~klWDvRS~k 379 (423)
T KOG0313|consen 369 TVKLWDVRSTK 379 (423)
T ss_pred eEEEEEeccCC
Confidence 99999998765
No 77
>KOG0641|consensus
Probab=99.42 E-value=6e-12 Score=66.36 Aligned_cols=81 Identities=22% Similarity=0.401 Sum_probs=71.0
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------------CCCEEEEEEccCCCEEEEe
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------------DSAVRSISFCSKQRTLISG 66 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------------~~~v~~~~~~~~~~~~~~~ 66 (84)
+|+..+.+.+| ++.|.++ ++-++.++++|+.|..+++||++.... .+.|..++..|.++.++++
T Consensus 172 ~g~~~~a~sgh-tghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg 249 (350)
T KOG0641|consen 172 RGQGFHALSGH-TGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASG 249 (350)
T ss_pred CCCcceeecCC-cccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeec
Confidence 47788899999 9999887 556899999999999999999986654 4679999999999999999
Q ss_pred cCCCcEEEEeCCCCeec
Q psy16880 67 GDDGSICMWNLNSKLCD 83 (84)
Q Consensus 67 ~~~~~i~~~~~~~~~~~ 83 (84)
-.|....+||++.+..+
T Consensus 250 ~~dssc~lydirg~r~i 266 (350)
T KOG0641|consen 250 HADSSCMLYDIRGGRMI 266 (350)
T ss_pred cCCCceEEEEeeCCcee
Confidence 99999999999987765
No 78
>KOG1446|consensus
Probab=99.41 E-value=7.2e-12 Score=67.82 Aligned_cols=77 Identities=26% Similarity=0.472 Sum_probs=66.6
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------------------------------------
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------------------------------------- 47 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------------------------------------- 47 (84)
+.++.. .+.|.++.|+++|..+++++.|-.+.+||...+..
T Consensus 8 k~f~~~-~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLs 86 (311)
T KOG1446|consen 8 KVFRET-NGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLS 86 (311)
T ss_pred cccccC-CCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEE
Confidence 344444 67899999999999999999999999999987654
Q ss_pred -------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 48 -------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 48 -------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
...|..++.+|-+..+++++.|++|++||++..+|+
T Consensus 87 l~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cq 135 (311)
T KOG1446|consen 87 LHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQ 135 (311)
T ss_pred eecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCc
Confidence 567999999998899999999999999999977664
No 79
>KOG0302|consensus
Probab=99.41 E-value=5e-12 Score=70.16 Aligned_cols=69 Identities=30% Similarity=0.648 Sum_probs=60.2
Q ss_pred ccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------CCCEEEEEEccCC-CEEEEecCCCcEEEEeC
Q psy16880 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------DSAVRSISFCSKQ-RTLISGGDDGSICMWNL 77 (84)
Q Consensus 9 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~-~~~~~~~~~~~i~~~~~ 77 (84)
..| .+.|..++|+..-.+|++|+.+|.+.+||++..+. ..+|+++.|+|.. ..+++++.|+.|.+||+
T Consensus 299 kAh-~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDl 377 (440)
T KOG0302|consen 299 KAH-NSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDL 377 (440)
T ss_pred ecc-CCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEe
Confidence 456 88999999999888999999999999999986654 7899999999954 56778888999999997
Q ss_pred C
Q psy16880 78 N 78 (84)
Q Consensus 78 ~ 78 (84)
.
T Consensus 378 s 378 (440)
T KOG0302|consen 378 S 378 (440)
T ss_pred e
Confidence 5
No 80
>KOG0292|consensus
Probab=99.41 E-value=2.9e-12 Score=77.34 Aligned_cols=77 Identities=23% Similarity=0.466 Sum_probs=69.5
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
+.+++| +-.|...+|+|.-..+++|+.|+.+++|.++..+. .+.|+++-|+|....+++.+.|+.|++||
T Consensus 200 ~VLEGH-DRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwD 278 (1202)
T KOG0292|consen 200 HVLEGH-DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWD 278 (1202)
T ss_pred eeeccc-ccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEe
Confidence 467888 88899999999999999999999999999987665 67899999999999999999999999999
Q ss_pred CCCCeec
Q psy16880 77 LNSKLCD 83 (84)
Q Consensus 77 ~~~~~~~ 83 (84)
+..+..+
T Consensus 279 m~kRt~v 285 (1202)
T KOG0292|consen 279 MTKRTSV 285 (1202)
T ss_pred cccccce
Confidence 9876654
No 81
>KOG0296|consensus
Probab=99.41 E-value=8.8e-12 Score=68.81 Aligned_cols=79 Identities=23% Similarity=0.455 Sum_probs=66.8
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
....+.+. -+.+.-|.|+|.+..|++|+.||.+-+|.+..... ..++++=.|.|+|+.++++..|++|++|+
T Consensus 140 ~~~~~~~e-~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn 218 (399)
T KOG0296|consen 140 EQWKLDQE-VEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWN 218 (399)
T ss_pred eEEEeecc-cCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEe
Confidence 34444433 56788999999999999999999999999987433 56788888999999999999999999999
Q ss_pred CCCCeec
Q psy16880 77 LNSKLCD 83 (84)
Q Consensus 77 ~~~~~~~ 83 (84)
+.++.++
T Consensus 219 ~ktg~p~ 225 (399)
T KOG0296|consen 219 PKTGQPL 225 (399)
T ss_pred cCCCcee
Confidence 9998765
No 82
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.40 E-value=1.7e-11 Score=63.70 Aligned_cols=71 Identities=14% Similarity=0.353 Sum_probs=56.8
Q ss_pred CcCEEEEEEccCCCEEE--EeCCCCcEEEEeCCCCCC----CCCEEEEEEccCCCEEEEecCC---CcEEEEeCCCCeec
Q psy16880 13 NSAVRSISFCSKQHTLI--SGGDDGSICMWNLNSKLC----DSAVRSISFCSKQRTLISGGDD---GSICMWNLNSKLCD 83 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~--~~~~~~~~~~~d~~~~~~----~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~ 83 (84)
.++|.+++|+|++..|+ .|..+..+.+||++.... ...+..+.|+|+|+++++++.+ |.+.+||.++.+.+
T Consensus 59 ~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~~~i~~~~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i 138 (194)
T PF08662_consen 59 EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKGKKIFSFGTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKI 138 (194)
T ss_pred CCceEEEEECcCCCEEEEEEccCCcccEEEcCcccEeEeecCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEe
Confidence 45799999999998764 345667999999974433 5677889999999999988754 56999999987765
No 83
>KOG0643|consensus
Probab=99.40 E-value=5.5e-12 Score=67.52 Aligned_cols=81 Identities=17% Similarity=0.295 Sum_probs=71.8
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
.++..+..+ .+.+..+-|.|.+..+++|..++.+..||++++.. ...|..++++++..++++++.|.+-++
T Consensus 138 ep~~kI~t~-~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl 216 (327)
T KOG0643|consen 138 EPYLKIPTP-DSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKL 216 (327)
T ss_pred CceEEecCC-ccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCcccee
Confidence 456777777 78889999999999999999999999999998654 668999999999999999999999999
Q ss_pred EeCCCCeecC
Q psy16880 75 WNLNSKLCDR 84 (84)
Q Consensus 75 ~~~~~~~~~~ 84 (84)
||..+-.+++
T Consensus 217 ~D~~tl~v~K 226 (327)
T KOG0643|consen 217 VDVRTLEVLK 226 (327)
T ss_pred eeccceeeEE
Confidence 9998876653
No 84
>KOG1539|consensus
Probab=99.39 E-value=1.1e-11 Score=74.11 Aligned_cols=81 Identities=23% Similarity=0.445 Sum_probs=69.7
Q ss_pred CceEEEe---ccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------------------------------
Q psy16880 2 GSIIHTF---VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------------------------------- 47 (84)
Q Consensus 2 g~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------------------------------- 47 (84)
|.....+ +.| .++|..++....++.+++++.+|.+.+||......
T Consensus 480 Gi~r~sf~~~~ah-~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I 558 (910)
T KOG1539|consen 480 GIHRKSFGDSPAH-KGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSI 558 (910)
T ss_pred CeeecccccCccc-cCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeE
Confidence 3444455 346 88999999988889999999999999999976642
Q ss_pred -----------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 48 -----------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 48 -----------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
.+.|+.++|+|+|+++++++.|++|++||+.++.++
T Consensus 559 ~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lI 611 (910)
T KOG1539|consen 559 RVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLI 611 (910)
T ss_pred EEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCccee
Confidence 678999999999999999999999999999998765
No 85
>KOG2110|consensus
Probab=99.39 E-value=1.6e-11 Score=67.91 Aligned_cols=76 Identities=13% Similarity=0.321 Sum_probs=65.8
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCc-EEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGS-ICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSI 72 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i 72 (84)
+++..+..| ++.+-+++|+++|.++++++..|. ++++++..+.. ...|+.++|+|++.++.+.+..++|
T Consensus 164 ~~v~~I~aH-~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTV 242 (391)
T KOG2110|consen 164 QPVNTINAH-KGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETV 242 (391)
T ss_pred eeeeEEEec-CCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeE
Confidence 456677888 999999999999999999999995 56999977665 4578999999999999999999999
Q ss_pred EEEeCCC
Q psy16880 73 CMWNLNS 79 (84)
Q Consensus 73 ~~~~~~~ 79 (84)
++|.+..
T Consensus 243 HiFKL~~ 249 (391)
T KOG2110|consen 243 HIFKLEK 249 (391)
T ss_pred EEEEecc
Confidence 9997754
No 86
>KOG0296|consensus
Probab=99.39 E-value=2.3e-11 Score=67.20 Aligned_cols=78 Identities=19% Similarity=0.409 Sum_probs=69.8
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
+|.....+.+| +..|.++.|+.++.+|++|..+|.+.+|+..++.. -..+..+.|+|.+..++.|+.||.+-
T Consensus 95 ~ge~~~eltgH-KDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvW 173 (399)
T KOG0296|consen 95 TGEFAGELTGH-KDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVW 173 (399)
T ss_pred CCcceeEecCC-CCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEE
Confidence 35566778889 99999999999999999999999999999987765 45688899999999999999999999
Q ss_pred EEeCCC
Q psy16880 74 MWNLNS 79 (84)
Q Consensus 74 ~~~~~~ 79 (84)
+|.+.+
T Consensus 174 mw~ip~ 179 (399)
T KOG0296|consen 174 MWQIPS 179 (399)
T ss_pred EEECCC
Confidence 999887
No 87
>KOG0268|consensus
Probab=99.39 E-value=1.7e-12 Score=71.70 Aligned_cols=77 Identities=23% Similarity=0.434 Sum_probs=68.5
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
.++..+.+| .+.|.+++|+|.|+-+++|+.|.++++|..+.... -+.|.++.|+-+.+++++|+.|+.+++
T Consensus 263 ~p~~v~~dh-vsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRl 341 (433)
T KOG0268|consen 263 RPLNVHKDH-VSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRL 341 (433)
T ss_pred ccchhhccc-ceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceee
Confidence 356667788 99999999999999999999999999999987765 568999999999999999999999999
Q ss_pred EeCCCC
Q psy16880 75 WNLNSK 80 (84)
Q Consensus 75 ~~~~~~ 80 (84)
|..+..
T Consensus 342 Wka~As 347 (433)
T KOG0268|consen 342 WKAKAS 347 (433)
T ss_pred eecchh
Confidence 976543
No 88
>KOG0305|consensus
Probab=99.39 E-value=4.4e-12 Score=72.83 Aligned_cols=75 Identities=25% Similarity=0.470 Sum_probs=63.4
Q ss_pred eccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccC-CCEEEEec--CCCcEEEEeC
Q psy16880 8 FVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSK-QRTLISGG--DDGSICMWNL 77 (84)
Q Consensus 8 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~-~~~~~~~~--~~~~i~~~~~ 77 (84)
+.+| ...|..++|++++..+++|++|..+.+||.....+ ...|-+++|+|- ...+++|+ .|+.|++||.
T Consensus 297 ~~~H-~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~ 375 (484)
T KOG0305|consen 297 LQGH-RQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNT 375 (484)
T ss_pred hhcc-cceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEc
Confidence 5567 88999999999999999999999999999955544 678999999994 45666654 4899999999
Q ss_pred CCCeec
Q psy16880 78 NSKLCD 83 (84)
Q Consensus 78 ~~~~~~ 83 (84)
.+++.+
T Consensus 376 ~~g~~i 381 (484)
T KOG0305|consen 376 NTGARI 381 (484)
T ss_pred CCCcEe
Confidence 988765
No 89
>KOG2111|consensus
Probab=99.38 E-value=1.7e-11 Score=66.70 Aligned_cols=72 Identities=13% Similarity=0.302 Sum_probs=64.1
Q ss_pred EeccCCCcCEEEEEEccCCCEEEEeCCCCc-EEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGS-ICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
.+..| ++.|.|++.+.+|.++++++..|+ +++||..++.. ...|++++|+|+..++++.+..|+++++.
T Consensus 176 ~I~AH-~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~ 254 (346)
T KOG2111|consen 176 IINAH-DSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFS 254 (346)
T ss_pred EEEcc-cCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEE
Confidence 45667 999999999999999999999995 57999987765 66899999999999999999999999998
Q ss_pred CCC
Q psy16880 77 LNS 79 (84)
Q Consensus 77 ~~~ 79 (84)
++.
T Consensus 255 l~~ 257 (346)
T KOG2111|consen 255 LRD 257 (346)
T ss_pred eec
Confidence 765
No 90
>KOG0310|consensus
Probab=99.38 E-value=1.8e-12 Score=73.33 Aligned_cols=75 Identities=21% Similarity=0.479 Sum_probs=64.3
Q ss_pred EEEeccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccC-CCEEEEecCCCcEEEE
Q psy16880 5 IHTFVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSK-QRTLISGGDDGSICMW 75 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~-~~~~~~~~~~~~i~~~ 75 (84)
++.+..| +.++..+.|+| ++..|++|+.|..+..||+.+... ...|++.+|+|. ..++++|+.||+|++|
T Consensus 103 LR~~~ah-~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~ 181 (487)
T KOG0310|consen 103 LRQLYAH-QAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLW 181 (487)
T ss_pred HHHHhhc-cCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEE
Confidence 3456778 99999999999 556888999999999999987755 678999999984 5689999999999999
Q ss_pred eCCCC
Q psy16880 76 NLNSK 80 (84)
Q Consensus 76 ~~~~~ 80 (84)
|.+..
T Consensus 182 DtR~~ 186 (487)
T KOG0310|consen 182 DTRSL 186 (487)
T ss_pred EeccC
Confidence 99865
No 91
>KOG0303|consensus
Probab=99.38 E-value=4.2e-12 Score=70.86 Aligned_cols=80 Identities=16% Similarity=0.268 Sum_probs=71.8
Q ss_pred ceEEEeccCCCcCEEEEEEccCC-CEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQ-HTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
+++..+.+| ...|.-+.|+|.. ..|++++.|..+.+|++.++.. ...|.+++|+.+|..+++.+.|..|++|
T Consensus 122 epvv~L~gH-~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~ 200 (472)
T KOG0303|consen 122 EPVVELYGH-QRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVI 200 (472)
T ss_pred cceEEEeec-ceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEE
Confidence 457788899 9999999999964 6889999999999999988765 6789999999999999999999999999
Q ss_pred eCCCCeec
Q psy16880 76 NLNSKLCD 83 (84)
Q Consensus 76 ~~~~~~~~ 83 (84)
|.++++.+
T Consensus 201 dpr~~~~v 208 (472)
T KOG0303|consen 201 DPRRGTVV 208 (472)
T ss_pred cCCCCcEe
Confidence 99988764
No 92
>KOG0646|consensus
Probab=99.38 E-value=1.8e-12 Score=73.11 Aligned_cols=42 Identities=19% Similarity=0.569 Sum_probs=30.2
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCC
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN 43 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~ 43 (84)
+|.++..+..| --.|.++.|+-++.++++|+.|+.|.+|++.
T Consensus 112 sG~LL~v~~aH-YQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~ 153 (476)
T KOG0646|consen 112 SGILLNVLSAH-YQSITCLKFSDDGSHIITGSKDGAVLVWLLT 153 (476)
T ss_pred cccHHHHHHhh-ccceeEEEEeCCCcEEEecCCCccEEEEEEE
Confidence 35555555566 6677888888888888888888888888653
No 93
>KOG1445|consensus
Probab=99.37 E-value=1.5e-12 Score=76.49 Aligned_cols=77 Identities=16% Similarity=0.290 Sum_probs=67.2
Q ss_pred eEEEeccCCCcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 4 IIHTFVHSNNSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
+...+..| ...|.++.|+|- ...|++++.|..+.+||+.+... ..+|..++|+|+|+.+++++.|+++++|
T Consensus 669 Pe~~lt~h-~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy 747 (1012)
T KOG1445|consen 669 PEKILTIH-GEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVY 747 (1012)
T ss_pred cceeeecc-cceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEe
Confidence 34456677 889999999994 56889999999999999987755 6789999999999999999999999999
Q ss_pred eCCCCe
Q psy16880 76 NLNSKL 81 (84)
Q Consensus 76 ~~~~~~ 81 (84)
+.+.++
T Consensus 748 ~Prs~e 753 (1012)
T KOG1445|consen 748 EPRSRE 753 (1012)
T ss_pred CCCCCC
Confidence 988664
No 94
>KOG0310|consensus
Probab=99.36 E-value=2.5e-11 Score=68.89 Aligned_cols=74 Identities=20% Similarity=0.388 Sum_probs=63.1
Q ss_pred EEEeccCCCcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 5 IHTFVHSNNSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
+..+.+| ++.|.+.+|+|. ...+++|+.|+.+++||.+.... ..+|..+.+-|.+..+++++ .+.+++||
T Consensus 146 ~~~l~~h-tDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAg-Gn~vkVWD 223 (487)
T KOG0310|consen 146 QAELSGH-TDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAG-GNSVKVWD 223 (487)
T ss_pred EEEecCC-cceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcC-CCeEEEEE
Confidence 3467888 999999999995 56899999999999999987633 67899999999998888886 57799999
Q ss_pred CCCC
Q psy16880 77 LNSK 80 (84)
Q Consensus 77 ~~~~ 80 (84)
+.++
T Consensus 224 l~~G 227 (487)
T KOG0310|consen 224 LTTG 227 (487)
T ss_pred ecCC
Confidence 9744
No 95
>KOG1310|consensus
Probab=99.36 E-value=5.5e-12 Score=73.04 Aligned_cols=74 Identities=22% Similarity=0.400 Sum_probs=65.0
Q ss_pred EEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEcc--CCCEEEEecCCCcEEE
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCS--KQRTLISGGDDGSICM 74 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~--~~~~~~~~~~~~~i~~ 74 (84)
...+++| ++.|.++.|+.+|.+|++|+.|..+.+||....+. ...|.++.|-| +.++++++..|..|++
T Consensus 43 E~eL~GH-~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l 121 (758)
T KOG1310|consen 43 EAELTGH-TGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL 121 (758)
T ss_pred hhhhccc-cceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence 3467889 99999999999999999999999999999975554 56799999998 3468889999999999
Q ss_pred EeCCC
Q psy16880 75 WNLNS 79 (84)
Q Consensus 75 ~~~~~ 79 (84)
+|+..
T Consensus 122 fdl~~ 126 (758)
T KOG1310|consen 122 FDLDS 126 (758)
T ss_pred Eeccc
Confidence 99875
No 96
>KOG0281|consensus
Probab=99.36 E-value=4.1e-12 Score=70.26 Aligned_cols=41 Identities=15% Similarity=0.468 Sum_probs=34.5
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC 47 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~ 47 (84)
+++.+.+| .+.|.|+.| +.+.+++|+.|..+++||.+++.+
T Consensus 229 c~~~L~GH-tGSVLCLqy--d~rviisGSSDsTvrvWDv~tge~ 269 (499)
T KOG0281|consen 229 CLKILTGH-TGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGEP 269 (499)
T ss_pred HHHhhhcC-CCcEEeeec--cceEEEecCCCceEEEEeccCCch
Confidence 45667788 999999988 566899999999999999988866
No 97
>KOG0973|consensus
Probab=99.36 E-value=1e-11 Score=75.33 Aligned_cols=75 Identities=20% Similarity=0.376 Sum_probs=69.0
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
.+..+++| .+.|..+.|+|++.+|++++.|.++.+|+..+... .+.|-++.|.|-|+++++-+.|++|++|+
T Consensus 121 ~~~~l~~H-~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwr 199 (942)
T KOG0973|consen 121 VVSILRGH-DSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWR 199 (942)
T ss_pred EEEEEecC-CCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEE
Confidence 56788899 99999999999999999999999999999988755 67899999999999999999999999999
Q ss_pred CCC
Q psy16880 77 LNS 79 (84)
Q Consensus 77 ~~~ 79 (84)
+.+
T Consensus 200 t~d 202 (942)
T KOG0973|consen 200 TSD 202 (942)
T ss_pred ccc
Confidence 655
No 98
>KOG0281|consensus
Probab=99.34 E-value=2.2e-12 Score=71.28 Aligned_cols=76 Identities=25% Similarity=0.643 Sum_probs=57.0
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
++++++++.+| .-.|-|+.+ .++++++|+.|..+++||+..+.. +..|.++.|. .+.+++|..||+|+
T Consensus 349 t~efvRtl~gH-kRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd--~krIVSGaYDGkik 423 (499)
T KOG0281|consen 349 TCEFVRTLNGH-KRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIK 423 (499)
T ss_pred ceeeehhhhcc-cccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec--CceeeeccccceEE
Confidence 45677777777 777777766 678888888888888888876655 5568888884 45688888888888
Q ss_pred EEeCCCCe
Q psy16880 74 MWNLNSKL 81 (84)
Q Consensus 74 ~~~~~~~~ 81 (84)
+||+..+.
T Consensus 424 vWdl~aal 431 (499)
T KOG0281|consen 424 VWDLQAAL 431 (499)
T ss_pred EEeccccc
Confidence 88876543
No 99
>KOG1273|consensus
Probab=99.34 E-value=1e-11 Score=67.83 Aligned_cols=77 Identities=18% Similarity=0.349 Sum_probs=60.0
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CC------------------------------
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DS------------------------------ 49 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~------------------------------ 49 (84)
+.+..| .-+|.+++|+++|++|++++.|..+.+||+..+.. .+
T Consensus 59 r~lsaH-~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s 137 (405)
T KOG1273|consen 59 RMLSAH-VRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFS 137 (405)
T ss_pred hhhhcc-ccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEecCCcEEEEec
Confidence 345667 88999999999999999999999999999987755 11
Q ss_pred -----------------CEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 50 -----------------AVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 50 -----------------~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
...+..|.+.|+++++|...|.+.+++..+-+++
T Consensus 138 ~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~v 188 (405)
T KOG1273|consen 138 DPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECV 188 (405)
T ss_pred CCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheee
Confidence 1123346677778888888888888887776654
No 100
>KOG0772|consensus
Probab=99.34 E-value=3.9e-12 Score=72.99 Aligned_cols=70 Identities=19% Similarity=0.388 Sum_probs=60.6
Q ss_pred ccCCCcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC-------------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 9 VHSNNSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC-------------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 9 ~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~-------------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
++| ...+.+.+|+|. ...|++++.|+++++||++.... +-.+...+|+++++.++.++.||.|.+
T Consensus 265 KGH-ia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~ 343 (641)
T KOG0772|consen 265 KGH-IAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQI 343 (641)
T ss_pred CCc-eeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceee
Confidence 567 888999999995 46889999999999999976544 456888999999999999999999999
Q ss_pred EeCCC
Q psy16880 75 WNLNS 79 (84)
Q Consensus 75 ~~~~~ 79 (84)
|+..+
T Consensus 344 W~~~~ 348 (641)
T KOG0772|consen 344 WDKGS 348 (641)
T ss_pred eecCC
Confidence 99754
No 101
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.34 E-value=5.3e-11 Score=72.32 Aligned_cols=74 Identities=11% Similarity=0.312 Sum_probs=64.2
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------------------CCCEEEEEEccCCCE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------------------DSAVRSISFCSKQRT 62 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------------------~~~v~~~~~~~~~~~ 62 (84)
++++.+.+| ...+.+++|++++.++++|+.|+.+.+|+...... ...|.+++|+|++..
T Consensus 699 ~~l~~~~gh-~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~ 777 (793)
T PLN00181 699 TPLHSFMGH-TNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSST 777 (793)
T ss_pred cceEEEcCC-CCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCe
Confidence 467788888 88899999999999999999999999999754321 235899999999999
Q ss_pred EEEecCCCcEEEEeC
Q psy16880 63 LISGGDDGSICMWNL 77 (84)
Q Consensus 63 ~~~~~~~~~i~~~~~ 77 (84)
+++++.+|.|++|++
T Consensus 778 lva~~~dG~I~i~~~ 792 (793)
T PLN00181 778 LVAANSTGNIKILEM 792 (793)
T ss_pred EEEecCCCcEEEEec
Confidence 999999999999985
No 102
>KOG0277|consensus
Probab=99.34 E-value=8.5e-12 Score=66.41 Aligned_cols=76 Identities=22% Similarity=0.511 Sum_probs=64.8
Q ss_pred ceEEEeccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccC-CCEEEEecCCCcEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSK-QRTLISGGDDGSIC 73 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~-~~~~~~~~~~~~i~ 73 (84)
++++.++.| ...|.++.|++ ....+++++.|+++++||.+.+.. +..|+...|+|. ...+++++.|+.++
T Consensus 95 ~Pi~~~kEH-~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~ 173 (311)
T KOG0277|consen 95 KPIHKFKEH-KREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLR 173 (311)
T ss_pred cchhHHHhh-hhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEE
Confidence 467788888 99999999999 566778889999999999976655 667999999995 56888999999999
Q ss_pred EEeCCC
Q psy16880 74 MWNLNS 79 (84)
Q Consensus 74 ~~~~~~ 79 (84)
+||++.
T Consensus 174 lwdvr~ 179 (311)
T KOG0277|consen 174 LWDVRS 179 (311)
T ss_pred EEEecC
Confidence 999864
No 103
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.33 E-value=1.2e-10 Score=60.56 Aligned_cols=69 Identities=19% Similarity=0.445 Sum_probs=55.3
Q ss_pred CcCEEEEEEccCCCEEEEeCC---CCcEEEEeCCCCCC-----CCCEEEEEEccCCCEEEEecC------CCcEEEEeCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGD---DGSICMWNLNSKLC-----DSAVRSISFCSKQRTLISGGD------DGSICMWNLN 78 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~---~~~~~~~d~~~~~~-----~~~v~~~~~~~~~~~~~~~~~------~~~i~~~~~~ 78 (84)
...+..+.|+|+|++++.++. .|.+.+||.+.... ...+..++|+|+|+.++++.. |+.++||+..
T Consensus 100 ~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 100 TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence 456778999999999988753 46799999986655 446889999999999988753 7789999986
Q ss_pred CCe
Q psy16880 79 SKL 81 (84)
Q Consensus 79 ~~~ 81 (84)
...
T Consensus 180 G~~ 182 (194)
T PF08662_consen 180 GRL 182 (194)
T ss_pred CeE
Confidence 543
No 104
>KOG0267|consensus
Probab=99.32 E-value=2.7e-12 Score=75.72 Aligned_cols=81 Identities=22% Similarity=0.481 Sum_probs=70.4
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
++.++++.+| ...+..+.|+|-+.+++.|+.|..+.+||++...+ ...+..+.|+|+|++++.++.|..+++
T Consensus 102 Ak~vrtLtgh-~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki 180 (825)
T KOG0267|consen 102 AKIVRTLTGH-LLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKI 180 (825)
T ss_pred hhhhhhhhcc-ccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeee
Confidence 4556788888 99999999999999999999999999999985544 345888999999999999999999999
Q ss_pred EeCCCCeec
Q psy16880 75 WNLNSKLCD 83 (84)
Q Consensus 75 ~~~~~~~~~ 83 (84)
||...++.+
T Consensus 181 ~d~~agk~~ 189 (825)
T KOG0267|consen 181 WDLTAGKLS 189 (825)
T ss_pred ecccccccc
Confidence 999776643
No 105
>KOG0293|consensus
Probab=99.31 E-value=1.4e-11 Score=69.18 Aligned_cols=77 Identities=17% Similarity=0.342 Sum_probs=66.8
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
+.++.| .+.|+.+.|+++|++|++++.|.+..+|++..... ...|.-+.|+|+.+++++++.+..+.+|
T Consensus 218 qil~~h-tdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lw 296 (519)
T KOG0293|consen 218 QILQDH-TDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLW 296 (519)
T ss_pred hhHhhC-CCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeec
Confidence 345667 89999999999999999999999999998754332 6789999999999999999999999999
Q ss_pred eCCCCeec
Q psy16880 76 NLNSKLCD 83 (84)
Q Consensus 76 ~~~~~~~~ 83 (84)
|..++.+.
T Consensus 297 Dv~tgd~~ 304 (519)
T KOG0293|consen 297 DVDTGDLR 304 (519)
T ss_pred cCCcchhh
Confidence 99887654
No 106
>KOG0305|consensus
Probab=99.31 E-value=4.5e-11 Score=68.81 Aligned_cols=76 Identities=20% Similarity=0.415 Sum_probs=61.2
Q ss_pred EEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------------------------------------
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------------------------------------- 47 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------------------------------------- 47 (84)
....+.+ ...|.++.|+++|..|+.|..+|.+.+||......
T Consensus 210 ~~l~~~~-~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR 288 (484)
T KOG0305|consen 210 TELCSFG-EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVR 288 (484)
T ss_pred EEeEecC-CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEe
Confidence 3333344 67899999999999999999999999999754422
Q ss_pred ------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 48 ------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 48 ------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
...|+.+.|++++.++++++.|+.+.|||.....
T Consensus 289 ~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~ 334 (484)
T KOG0305|consen 289 ISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPE 334 (484)
T ss_pred cchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCcc
Confidence 5678999999999999999999999999885433
No 107
>KOG0274|consensus
Probab=99.31 E-value=3.4e-11 Score=70.44 Aligned_cols=79 Identities=27% Similarity=0.527 Sum_probs=60.9
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
+|++++.+.+| .++|.++..+ +..+++|+.|+.+.+||+..... ...|.++.+.+. ..+++++.|+.|+
T Consensus 320 n~~~l~l~~~h-~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~Ik 395 (537)
T KOG0274|consen 320 NGACLNLLRGH-TGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIK 395 (537)
T ss_pred CcceEEEeccc-cccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceE
Confidence 36777888777 8888888875 78888888888888888876655 556777766554 6788888888888
Q ss_pred EEeCCCC-eec
Q psy16880 74 MWNLNSK-LCD 83 (84)
Q Consensus 74 ~~~~~~~-~~~ 83 (84)
+||+++. +|+
T Consensus 396 vWdl~~~~~c~ 406 (537)
T KOG0274|consen 396 VWDLRTKRKCI 406 (537)
T ss_pred eecCCchhhhh
Confidence 8888877 543
No 108
>KOG0274|consensus
Probab=99.30 E-value=8.3e-11 Score=68.88 Aligned_cols=79 Identities=24% Similarity=0.584 Sum_probs=68.6
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
+|++.+.+.+| .+.|.++.. ..-.+.+|+.|..+++|++.++.. ...|.++.+. +..+++|+.|+.|+
T Consensus 280 sg~C~~~l~gh-~stv~~~~~--~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~ 354 (537)
T KOG0274|consen 280 TGECTHSLQGH-TSSVRCLTI--DPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVK 354 (537)
T ss_pred CCcEEEEecCC-CceEEEEEc--cCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEE
Confidence 58999999999 999998866 566778899999999999987655 5678999886 77899999999999
Q ss_pred EEeCCCCeecC
Q psy16880 74 MWNLNSKLCDR 84 (84)
Q Consensus 74 ~~~~~~~~~~~ 84 (84)
+|++.+.++++
T Consensus 355 VW~~~~~~cl~ 365 (537)
T KOG0274|consen 355 VWDPRTGKCLK 365 (537)
T ss_pred EEEhhhceeee
Confidence 99999988764
No 109
>KOG0269|consensus
Probab=99.30 E-value=9e-12 Score=73.96 Aligned_cols=76 Identities=16% Similarity=0.370 Sum_probs=61.3
Q ss_pred EEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCC-EEEEecC--CCcEE
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQR-TLISGGD--DGSIC 73 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~-~~~~~~~--~~~i~ 73 (84)
...+..| .++|.|+.|+|+..+|++|+.|+.+++||+..... ..++.++.|.|... .+++++. |..|+
T Consensus 213 ~~k~~AH-~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~ 291 (839)
T KOG0269|consen 213 EKKLTAH-NGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVH 291 (839)
T ss_pred HHHhhcc-cCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEE
Confidence 3445567 99999999999999999999999999999975544 56899999999654 4555543 67899
Q ss_pred EEeCCCCe
Q psy16880 74 MWNLNSKL 81 (84)
Q Consensus 74 ~~~~~~~~ 81 (84)
|||++...
T Consensus 292 VWDvrRPY 299 (839)
T KOG0269|consen 292 VWDVRRPY 299 (839)
T ss_pred EEeecccc
Confidence 99997654
No 110
>KOG0300|consensus
Probab=99.30 E-value=2.1e-11 Score=66.94 Aligned_cols=79 Identities=19% Similarity=0.477 Sum_probs=67.9
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSI 72 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i 72 (84)
+|++++.+.+| .....-++-+|..+++++.+.|..+++||.+..-. ...|+.+.|..+. .+++++.|.++
T Consensus 303 tge~v~~LtGH-d~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd-~vVSgSDDrTv 380 (481)
T KOG0300|consen 303 TGEVVNILTGH-DSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD-RVVSGSDDRTV 380 (481)
T ss_pred cCceeccccCc-chhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCC-ceeecCCCceE
Confidence 57889999999 88888888899999999999999999999985433 5568888888655 48899999999
Q ss_pred EEEeCCCCe
Q psy16880 73 CMWNLNSKL 81 (84)
Q Consensus 73 ~~~~~~~~~ 81 (84)
++||++++.
T Consensus 381 KvWdLrNMR 389 (481)
T KOG0300|consen 381 KVWDLRNMR 389 (481)
T ss_pred EEeeecccc
Confidence 999998765
No 111
>KOG0294|consensus
Probab=99.28 E-value=8.3e-11 Score=64.20 Aligned_cols=77 Identities=19% Similarity=0.419 Sum_probs=65.8
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCC--EEEEecCCCcEEE
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQR--TLISGGDDGSICM 74 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~--~~~~~~~~~~i~~ 74 (84)
++..++.| .+.|.++++ ++.++++|+.|..+.+||++.... .+.|+++.|.+... .+++++.||.|.+
T Consensus 35 ~lF~~~aH-~~sitavAV--s~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~i 111 (362)
T KOG0294|consen 35 PLFAFSAH-AGSITALAV--SGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIII 111 (362)
T ss_pred cccccccc-ccceeEEEe--cceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEE
Confidence 35667778 999999998 699999999999999999987655 77899999987654 7999999999999
Q ss_pred EeCCCCeec
Q psy16880 75 WNLNSKLCD 83 (84)
Q Consensus 75 ~~~~~~~~~ 83 (84)
|+....+++
T Consensus 112 w~~~~W~~~ 120 (362)
T KOG0294|consen 112 WRVGSWELL 120 (362)
T ss_pred EEcCCeEEe
Confidence 998876654
No 112
>KOG1063|consensus
Probab=99.28 E-value=3.7e-11 Score=70.77 Aligned_cols=74 Identities=11% Similarity=0.293 Sum_probs=64.2
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
+.+++| .-.|..|+|+|++++|++.+.|+.+.+|....... ...|....|+|+++.++++++|.++++
T Consensus 566 ~~L~~H-sLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkV 644 (764)
T KOG1063|consen 566 QELEGH-SLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKV 644 (764)
T ss_pred heeccc-ceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEE
Confidence 357788 88999999999999999999999999998754332 456888999999999999999999999
Q ss_pred EeCCCC
Q psy16880 75 WNLNSK 80 (84)
Q Consensus 75 ~~~~~~ 80 (84)
|...+.
T Consensus 645 W~~~~~ 650 (764)
T KOG1063|consen 645 WEEPDL 650 (764)
T ss_pred EeccCc
Confidence 987655
No 113
>KOG0308|consensus
Probab=99.27 E-value=7.6e-11 Score=69.19 Aligned_cols=73 Identities=21% Similarity=0.474 Sum_probs=66.4
Q ss_pred cCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 10 HSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 10 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
++ ...|.+++.++.+..+++|+..+.+++||.++... ...|..+-..++|+.+++++.|++|++||+...+|
T Consensus 169 G~-k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrC 247 (735)
T KOG0308|consen 169 GP-KDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRC 247 (735)
T ss_pred CC-ccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccce
Confidence 56 78899999999999999999999999999987765 56799999999999999999999999999988777
Q ss_pred c
Q psy16880 83 D 83 (84)
Q Consensus 83 ~ 83 (84)
+
T Consensus 248 l 248 (735)
T KOG0308|consen 248 L 248 (735)
T ss_pred e
Confidence 5
No 114
>KOG1188|consensus
Probab=99.27 E-value=6.4e-11 Score=65.09 Aligned_cols=78 Identities=23% Similarity=0.522 Sum_probs=63.6
Q ss_pred CCceEEEeccCCCcCEEEEEEcc--CCCEEEEeCCCCcEEEEeCCCCCC-------------------------------
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCS--KQHTLISGGDDGSICMWNLNSKLC------------------------------- 47 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~~~~~d~~~~~~------------------------------- 47 (84)
+|+.++.+.++ ...+..++|.. .+..+.+++.||.|++||++....
T Consensus 59 tg~~l~~fk~~-~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE 137 (376)
T KOG1188|consen 59 TGQLLEEFKGP-PATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTE 137 (376)
T ss_pred chhhhheecCC-CCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccc
Confidence 46678888888 88888888877 567889999999999999985533
Q ss_pred ---------------------------CCCEEEEEEccC-CCEEEEecCCCcEEEEeCCC
Q psy16880 48 ---------------------------DSAVRSISFCSK-QRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 48 ---------------------------~~~v~~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 79 (84)
...|++++|+|+ ..++++|+.||.+.+||++.
T Consensus 138 ~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~ 197 (376)
T KOG1188|consen 138 LTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKK 197 (376)
T ss_pred cccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCC
Confidence 456899999984 56888999999999998864
No 115
>KOG0288|consensus
Probab=99.26 E-value=1.6e-10 Score=64.89 Aligned_cols=79 Identities=18% Similarity=0.308 Sum_probs=68.1
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----------CCCEEEEEEccCCCEEEEecCCCc
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----------DSAVRSISFCSKQRTLISGGDDGS 71 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~~ 71 (84)
.+++.++. .+.|.+++.++++..+++.+.|..+.+.|.++... ....+.+.|+|++.++++|+.||.
T Consensus 333 ~~~~sv~~--gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgs 410 (459)
T KOG0288|consen 333 DKTRSVPL--GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGS 410 (459)
T ss_pred ceeeEeec--CcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCc
Confidence 45555555 36899999999999999999999999999998766 456788999999999999999999
Q ss_pred EEEEeCCCCeec
Q psy16880 72 ICMWNLNSKLCD 83 (84)
Q Consensus 72 i~~~~~~~~~~~ 83 (84)
+++|++.++++.
T Consensus 411 v~iW~v~tgKlE 422 (459)
T KOG0288|consen 411 VYIWSVFTGKLE 422 (459)
T ss_pred EEEEEccCceEE
Confidence 999999988764
No 116
>KOG2048|consensus
Probab=99.25 E-value=2.8e-10 Score=66.90 Aligned_cols=81 Identities=22% Similarity=0.302 Sum_probs=69.0
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSI 72 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i 72 (84)
++....++.. .+.|++|+.+|.+..++.|+.+|.+..+++..... .+++.+++|.|++..++.|+.|+.|
T Consensus 100 lk~~~~~d~~-gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~I 178 (691)
T KOG2048|consen 100 LKQKYNIDSN-GGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVI 178 (691)
T ss_pred CceeEEecCC-CcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceE
Confidence 4566666666 78999999999999999999999777777766555 5789999999999999999999999
Q ss_pred EEEeCCCCeec
Q psy16880 73 CMWNLNSKLCD 83 (84)
Q Consensus 73 ~~~~~~~~~~~ 83 (84)
++||...+..+
T Consensus 179 riwd~~~~~t~ 189 (691)
T KOG2048|consen 179 RIWDVKSGQTL 189 (691)
T ss_pred EEEEcCCCceE
Confidence 99999876643
No 117
>KOG1009|consensus
Probab=99.24 E-value=1.1e-10 Score=65.36 Aligned_cols=78 Identities=22% Similarity=0.485 Sum_probs=66.5
Q ss_pred EEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCC--------C-----CCC----------CCCEEEEEEccCCC
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN--------S-----KLC----------DSAVRSISFCSKQR 61 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~--------~-----~~~----------~~~v~~~~~~~~~~ 61 (84)
+..+..| +..|.++.|+|+|..|++|+.++.+.+|-.. + ... ...++.++|+|++.
T Consensus 58 ~s~Ls~H-~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~ 136 (434)
T KOG1009|consen 58 LSSLSRH-TRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSN 136 (434)
T ss_pred eecccCC-cceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCc
Confidence 4456667 8899999999999999999999999999765 2 100 46789999999999
Q ss_pred EEEEecCCCcEEEEeCCCCeec
Q psy16880 62 TLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 62 ~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
.+.+++.|+.+++||+..++.+
T Consensus 137 ~l~s~s~dns~~l~Dv~~G~l~ 158 (434)
T KOG1009|consen 137 FLVSGSVDNSVRLWDVHAGQLL 158 (434)
T ss_pred eeeeeeccceEEEEEeccceeE
Confidence 9999999999999999988754
No 118
>KOG0289|consensus
Probab=99.24 E-value=1.8e-10 Score=65.14 Aligned_cols=73 Identities=22% Similarity=0.345 Sum_probs=64.9
Q ss_pred eccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy16880 8 FVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 8 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (84)
.+.| +++|..+..+|.|.+|+++++++.+.+.|+..+.. .-.+++.+|+|+|-++.++..|+.+++||+.
T Consensus 299 ~~~h-~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlk 377 (506)
T KOG0289|consen 299 SRPH-EEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLK 377 (506)
T ss_pred cccc-cccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcC
Confidence 3456 89999999999999999999999999999998876 2348999999999999999999999999997
Q ss_pred CCe
Q psy16880 79 SKL 81 (84)
Q Consensus 79 ~~~ 81 (84)
+..
T Consensus 378 s~~ 380 (506)
T KOG0289|consen 378 SQT 380 (506)
T ss_pred Ccc
Confidence 654
No 119
>KOG1407|consensus
Probab=99.23 E-value=2.2e-10 Score=61.36 Aligned_cols=80 Identities=16% Similarity=0.377 Sum_probs=65.3
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------------------------------
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------------------------------- 47 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------------------------------- 47 (84)
++++...++.. .+.+ -+.|+|++.+++.++.+-.+.+.|.++.+.
T Consensus 96 ~~k~~~~i~~~-~eni-~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~I 173 (313)
T KOG1407|consen 96 SGKCTARIETK-GENI-NITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEI 173 (313)
T ss_pred cCcEEEEeecc-Ccce-EEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEE
Confidence 35677777665 5555 568999999999999999999999876544
Q ss_pred ---------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 48 ---------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 48 ---------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
+....|+.|.|+|+++++|+.|..+.+||+...-|
T Consensus 174 LsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC 223 (313)
T KOG1407|consen 174 LSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELIC 223 (313)
T ss_pred EeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhh
Confidence 55678899999999999999999999999876544
No 120
>KOG0278|consensus
Probab=99.23 E-value=1e-11 Score=66.13 Aligned_cols=80 Identities=20% Similarity=0.559 Sum_probs=66.9
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
|..++.++ | +.-|.+++|+.+...|++|+....+++||++.+.. .+.|..+-|+-..+.+++...|+.++
T Consensus 91 gdelhsf~-h-khivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVR 168 (334)
T KOG0278|consen 91 GDELHSFE-H-KHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVR 168 (334)
T ss_pred hhhhhhhh-h-hheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceE
Confidence 33444443 3 67889999999999999999999999999986654 66799999988778888889999999
Q ss_pred EEeCCCCeec
Q psy16880 74 MWNLNSKLCD 83 (84)
Q Consensus 74 ~~~~~~~~~~ 83 (84)
+||.+++..+
T Consensus 169 LWD~rTgt~v 178 (334)
T KOG0278|consen 169 LWDHRTGTEV 178 (334)
T ss_pred EEEeccCcEE
Confidence 9999988764
No 121
>KOG0294|consensus
Probab=99.23 E-value=1.1e-10 Score=63.73 Aligned_cols=73 Identities=25% Similarity=0.459 Sum_probs=62.7
Q ss_pred eccCCCcCEEEEEEccCCC--EEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy16880 8 FVHSNNSAVRSISFCSKQH--TLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 8 ~~~~~~~~v~~~~~~~~~~--~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (84)
+-.| .+.|+++.|.+... .|++|+.||.+.+|+...... ...|+.++++|.++..++++.|+.+++||+-
T Consensus 79 ll~H-agsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV 157 (362)
T KOG0294|consen 79 LLSH-AGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLV 157 (362)
T ss_pred eecc-ccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhh
Confidence 3345 88999999998664 899999999999999976644 5669999999999999999999999999986
Q ss_pred CCe
Q psy16880 79 SKL 81 (84)
Q Consensus 79 ~~~ 81 (84)
.++
T Consensus 158 ~Gr 160 (362)
T KOG0294|consen 158 RGR 160 (362)
T ss_pred cCc
Confidence 554
No 122
>KOG1272|consensus
Probab=99.22 E-value=2.9e-11 Score=68.70 Aligned_cols=80 Identities=19% Similarity=0.332 Sum_probs=69.7
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
|+++..+... .+.+..|+-+|-...+-.|..+|.|.+|....... .+.|+++++.++|+++++.+.|..++|
T Consensus 241 GklVa~~~t~-~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kI 319 (545)
T KOG1272|consen 241 GKLVASIRTG-AGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKI 319 (545)
T ss_pred hhhhHHHHcc-CCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeE
Confidence 5666666666 78888999999999999999999999999876655 889999999999999999999999999
Q ss_pred EeCCCCee
Q psy16880 75 WNLNSKLC 82 (84)
Q Consensus 75 ~~~~~~~~ 82 (84)
||+++-+.
T Consensus 320 WDlR~~~q 327 (545)
T KOG1272|consen 320 WDLRNFYQ 327 (545)
T ss_pred eeeccccc
Confidence 99986543
No 123
>KOG0303|consensus
Probab=99.22 E-value=3.4e-11 Score=67.36 Aligned_cols=74 Identities=19% Similarity=0.495 Sum_probs=62.5
Q ss_pred eccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC--------------CCCEEEEEEccCC-CEEEEecCCCc
Q psy16880 8 FVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC--------------DSAVRSISFCSKQ-RTLISGGDDGS 71 (84)
Q Consensus 8 ~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~--------------~~~v~~~~~~~~~-~~~~~~~~~~~ 71 (84)
+.+| +++|..++|+| +...+++|+.|..+.+|++..... ...|..++|+|.. +.+++++.|++
T Consensus 77 v~GH-t~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 77 VCGH-TAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred ccCc-cccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 4678 99999999999 567899999999999999975544 5678899999965 56678889999
Q ss_pred EEEEeCCCCee
Q psy16880 72 ICMWNLNSKLC 82 (84)
Q Consensus 72 i~~~~~~~~~~ 82 (84)
|.+|+..+++.
T Consensus 156 v~iWnv~tgea 166 (472)
T KOG0303|consen 156 VSIWNVGTGEA 166 (472)
T ss_pred EEEEeccCCce
Confidence 99999998874
No 124
>KOG0642|consensus
Probab=99.20 E-value=4.4e-10 Score=65.00 Aligned_cols=77 Identities=29% Similarity=0.423 Sum_probs=66.2
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------------------CCCEEEEEEccCCCEEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------------------DSAVRSISFCSKQRTLI 64 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------------------~~~v~~~~~~~~~~~~~ 64 (84)
+++.++++| .++|.|+.+.+++..+.+|+.|+.++.|.+. ... ...+..+++++....++
T Consensus 335 epi~tfraH-~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p-~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Ll 412 (577)
T KOG0642|consen 335 EPILTFRAH-EGPVLCVVVPSNGEHCYSGGIDGTIRCWNLP-PNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLL 412 (577)
T ss_pred eeeEEEecc-cCceEEEEecCCceEEEeeccCceeeeeccC-CCCCcccccCcchhccceeccccceeeeeeccccccee
Confidence 478899999 9999999999999999999999999999664 222 56788899998888899
Q ss_pred EecCCCcEEEEeCCCCe
Q psy16880 65 SGGDDGSICMWNLNSKL 81 (84)
Q Consensus 65 ~~~~~~~i~~~~~~~~~ 81 (84)
+++.||++++|+.....
T Consensus 413 scs~DgTvr~w~~~~~~ 429 (577)
T KOG0642|consen 413 SCSSDGTVRLWEPTEES 429 (577)
T ss_pred eecCCceEEeeccCCcC
Confidence 99999999999876543
No 125
>KOG0300|consensus
Probab=99.20 E-value=7.1e-11 Score=64.94 Aligned_cols=83 Identities=14% Similarity=0.333 Sum_probs=69.7
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCC----CCCC-----------------------------
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN----SKLC----------------------------- 47 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~----~~~~----------------------------- 47 (84)
+|+|+.+|.+| .+.|.+++|++.+.++++++.|+.-.+|... .+..
T Consensus 179 sg~CL~~Y~GH-~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD 257 (481)
T KOG0300|consen 179 SGACLATYTGH-TGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSD 257 (481)
T ss_pred cccceeeeccc-ccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccC
Confidence 58899999999 9999999999999999999999999999621 1110
Q ss_pred --------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeecC
Q psy16880 48 --------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCDR 84 (84)
Q Consensus 48 --------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 84 (84)
...|.+..|-..+..++++++|.+..+||.++++.++
T Consensus 258 ~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~ 308 (481)
T KOG0300|consen 258 GHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVN 308 (481)
T ss_pred CceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceec
Confidence 4456777777788899999999999999999988764
No 126
>KOG4283|consensus
Probab=99.20 E-value=2.3e-10 Score=62.36 Aligned_cols=67 Identities=18% Similarity=0.394 Sum_probs=57.5
Q ss_pred CcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC--------------------------------------------
Q psy16880 13 NSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC-------------------------------------------- 47 (84)
Q Consensus 13 ~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~-------------------------------------------- 47 (84)
.-.|.++-|.| +...|.+++.|..+++||.++.+.
T Consensus 101 ky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~ 180 (397)
T KOG4283|consen 101 KYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSF 180 (397)
T ss_pred eeeeeeeEEeeecCceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcc
Confidence 66788999999 778999999999999999987654
Q ss_pred -------CCCEEEEEEccCCCEE-EEecCCCcEEEEeCCC
Q psy16880 48 -------DSAVRSISFCSKQRTL-ISGGDDGSICMWNLNS 79 (84)
Q Consensus 48 -------~~~v~~~~~~~~~~~~-~~~~~~~~i~~~~~~~ 79 (84)
+..|.++.|+|...++ ++++.|+.|++||++.
T Consensus 181 sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRr 220 (397)
T KOG4283|consen 181 SHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRR 220 (397)
T ss_pred eeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeec
Confidence 6789999999977654 6889999999999874
No 127
>KOG2096|consensus
Probab=99.20 E-value=2.5e-10 Score=62.75 Aligned_cols=69 Identities=14% Similarity=0.320 Sum_probs=48.1
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----------CCCEEEEEEccCCCEEEE-ecCCCcEE
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----------DSAVRSISFCSKQRTLIS-GGDDGSIC 73 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----------~~~v~~~~~~~~~~~~~~-~~~~~~i~ 73 (84)
..+++| .+.|.+|+|+.+|..|++++.|+.+++|+++.... ....+.+.|.|+.+-++. +-..++++
T Consensus 80 ~~LKgH-~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~ 158 (420)
T KOG2096|consen 80 SVLKGH-KKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLC 158 (420)
T ss_pred hhhhcc-CCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEE
Confidence 356788 99999999999999999999999999999975433 234455555555443322 22233455
Q ss_pred EE
Q psy16880 74 MW 75 (84)
Q Consensus 74 ~~ 75 (84)
+|
T Consensus 159 vy 160 (420)
T KOG2096|consen 159 VY 160 (420)
T ss_pred EE
Confidence 55
No 128
>KOG0290|consensus
Probab=99.19 E-value=7.6e-10 Score=60.18 Aligned_cols=73 Identities=25% Similarity=0.480 Sum_probs=60.8
Q ss_pred EeccCCCcCEEEEEEccCC-CEEEEeCCCCcEEEEeCCCCCC--------------------------------------
Q psy16880 7 TFVHSNNSAVRSISFCSKQ-HTLISGGDDGSICMWNLNSKLC-------------------------------------- 47 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~~~~d~~~~~~-------------------------------------- 47 (84)
.+-.| ...|..++|..++ ..|++.+.||++++||++....
T Consensus 191 QLIAH-DKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~ 269 (364)
T KOG0290|consen 191 QLIAH-DKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVV 269 (364)
T ss_pred EEEec-CcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEE
Confidence 44456 8999999999855 5899999999999999986533
Q ss_pred -----------------CCCEEEEEEccCC-CEEEEecCCCcEEEEeCCCC
Q psy16880 48 -----------------DSAVRSISFCSKQ-RTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 48 -----------------~~~v~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~ 80 (84)
++.|.+++|.|.. ..+.+++.|....+||+...
T Consensus 270 iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~ 320 (364)
T KOG0290|consen 270 ILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQM 320 (364)
T ss_pred EEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccc
Confidence 6789999999965 57788889999999998754
No 129
>KOG0641|consensus
Probab=99.19 E-value=5.2e-10 Score=59.24 Aligned_cols=66 Identities=21% Similarity=0.317 Sum_probs=60.7
Q ss_pred cCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
+.|.++++.|.|++|++|-.|..+.+||++.+.. ...|+++.|+|...++++++.|..|++-|+..
T Consensus 232 savaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqg 304 (350)
T KOG0641|consen 232 SAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG 304 (350)
T ss_pred ceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeeccc
Confidence 5789999999999999999999999999998766 67899999999999999999999999998764
No 130
>KOG1332|consensus
Probab=99.17 E-value=1.1e-09 Score=58.34 Aligned_cols=77 Identities=16% Similarity=0.346 Sum_probs=65.9
Q ss_pred ceEEEeccCCCcCEEEEEEcc--CCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCC--CEEEEecCC
Q psy16880 3 SIIHTFVHSNNSAVRSISFCS--KQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQ--RTLISGGDD 69 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~--~~~~~~~~~ 69 (84)
+++.++.+| .++|..++|-- -|..|++++.|+.+.+|....+.- ...|.+++|.|++ -.+++++.|
T Consensus 47 ~ll~~L~Gh-~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSD 125 (299)
T KOG1332|consen 47 KLLAELTGH-SGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSD 125 (299)
T ss_pred eeeeEecCC-CCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCC
Confidence 577889999 99999999965 789999999999999999876633 6789999999864 578899999
Q ss_pred CcEEEEeCCCC
Q psy16880 70 GSICMWNLNSK 80 (84)
Q Consensus 70 ~~i~~~~~~~~ 80 (84)
|.|.+.+.++.
T Consensus 126 G~vsvl~~~~~ 136 (299)
T KOG1332|consen 126 GKVSVLTYDSS 136 (299)
T ss_pred CcEEEEEEcCC
Confidence 99999987643
No 131
>KOG0306|consensus
Probab=99.17 E-value=5.2e-10 Score=66.80 Aligned_cols=77 Identities=21% Similarity=0.446 Sum_probs=67.8
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
..-.+.|| .-+|.||+.+|++..+++|+.|..+++|-++-+.+ ...|.++.|.|+..++.+++.|+.++-||
T Consensus 542 FflsLYGH-kLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWD 620 (888)
T KOG0306|consen 542 FFLSLYGH-KLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWD 620 (888)
T ss_pred eeeeeccc-ccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeec
Confidence 34467788 99999999999999999999999999998876655 57899999999999999999999999998
Q ss_pred CCCCe
Q psy16880 77 LNSKL 81 (84)
Q Consensus 77 ~~~~~ 81 (84)
-..-+
T Consensus 621 g~kFe 625 (888)
T KOG0306|consen 621 GEKFE 625 (888)
T ss_pred hhhhh
Confidence 65443
No 132
>KOG0639|consensus
Probab=99.16 E-value=1.2e-10 Score=67.13 Aligned_cols=78 Identities=21% Similarity=0.388 Sum_probs=66.0
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----------------------------------
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------------------------------- 47 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------------------------------- 47 (84)
..++.+++| ++.+.||..+++|..|.+|+.|..++.||+++...
T Consensus 542 ~~VrqfqGh-tDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh 620 (705)
T KOG0639|consen 542 TLVRQFQGH-TDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLH 620 (705)
T ss_pred eeeecccCC-CCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEe
Confidence 468899999 99999999999999999999999999999987755
Q ss_pred ------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 48 ------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 48 ------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
++.|..+.|.+.|+++++.+.|+.+..|....+-
T Consensus 621 ~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGa 666 (705)
T KOG0639|consen 621 TSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 666 (705)
T ss_pred cCCccceeecccccEEEEEEecccCceeeecCchhhhhhccCcccc
Confidence 5567778888888888888888888888766543
No 133
>KOG1036|consensus
Probab=99.16 E-value=8.8e-10 Score=59.95 Aligned_cols=67 Identities=27% Similarity=0.523 Sum_probs=59.0
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 80 (84)
.+++.+++|.+ ....++|+.|+.++++|+++... ...+.++.+.+....++++++|++|++||.+..
T Consensus 54 ~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~ 126 (323)
T KOG1036|consen 54 GAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNK 126 (323)
T ss_pred CCceeeeeccC-CceEEEeccCceEEEEEecCCcceeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccc
Confidence 78999999886 56778899999999999988766 678999999988888999999999999999853
No 134
>KOG0306|consensus
Probab=99.16 E-value=5.5e-10 Score=66.70 Aligned_cols=70 Identities=17% Similarity=0.325 Sum_probs=63.0
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
++.|.|++++|++++|+.+-.|..+.+|-+++.+- .-+|.++.++|+++++++|+.|..+++|-+.=+.|
T Consensus 508 ~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDC 584 (888)
T KOG0306|consen 508 EDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDC 584 (888)
T ss_pred cccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchh
Confidence 57899999999999999999999999999887655 55899999999999999999999999998765554
No 135
>KOG0267|consensus
Probab=99.16 E-value=2.7e-11 Score=71.70 Aligned_cols=75 Identities=23% Similarity=0.500 Sum_probs=66.5
Q ss_pred EeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
.+.+| .++|.++.|++...++++|..+|.+++||+..... ...+..+.|+|.+.+++.++.|..+.+||.+.
T Consensus 65 S~~~h-espIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk 143 (825)
T KOG0267|consen 65 SLTGH-ESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRK 143 (825)
T ss_pred eeecc-CCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhc
Confidence 46778 99999999999999999999999999999987764 56788899999999999999999999999985
Q ss_pred Cee
Q psy16880 80 KLC 82 (84)
Q Consensus 80 ~~~ 82 (84)
+-|
T Consensus 144 ~Gc 146 (825)
T KOG0267|consen 144 KGC 146 (825)
T ss_pred cCc
Confidence 544
No 136
>KOG2919|consensus
Probab=99.14 E-value=1.2e-09 Score=60.17 Aligned_cols=77 Identities=22% Similarity=0.429 Sum_probs=60.9
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCC-CCcEEEEeCCCCCC-----------CCCEEEEEEccCCCEEEEecCC
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGD-DGSICMWNLNSKLC-----------DSAVRSISFCSKQRTLISGGDD 69 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~~~d~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~ 69 (84)
+.++..+-+| .+.|+.+.|+++|..|.+|.. +-.+..||++.... .++---+...|.+.++++|+.+
T Consensus 240 ~~pl~llggh-~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~td 318 (406)
T KOG2919|consen 240 RRPLQLLGGH-GGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTD 318 (406)
T ss_pred CCceeeeccc-CCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCC
Confidence 4567777788 999999999999999988865 55888999986543 1222234446899999999999
Q ss_pred CcEEEEeCCC
Q psy16880 70 GSICMWNLNS 79 (84)
Q Consensus 70 ~~i~~~~~~~ 79 (84)
|.|++||+.+
T Consensus 319 G~V~vwdlk~ 328 (406)
T KOG2919|consen 319 GSVRVWDLKD 328 (406)
T ss_pred ccEEEEecCC
Confidence 9999999876
No 137
>KOG0308|consensus
Probab=99.13 E-value=1.5e-09 Score=63.98 Aligned_cols=77 Identities=25% Similarity=0.430 Sum_probs=68.2
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
++.+..+++| +..|.++..+++|..+++++.|+.+++||+..... ...|.+...+|.-..+.+|+.|+.|..
T Consensus 203 ~~kimkLrGH-TdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~ 281 (735)
T KOG0308|consen 203 CKKIMKLRGH-TDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYR 281 (735)
T ss_pred ccceeeeecc-ccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEe
Confidence 4566778899 99999999999999999999999999999987666 455888888898889999999999998
Q ss_pred EeCCC
Q psy16880 75 WNLNS 79 (84)
Q Consensus 75 ~~~~~ 79 (84)
=|+++
T Consensus 282 Tdl~n 286 (735)
T KOG0308|consen 282 TDLRN 286 (735)
T ss_pred cccCC
Confidence 88876
No 138
>KOG0307|consensus
Probab=99.13 E-value=5.4e-11 Score=72.77 Aligned_cols=77 Identities=30% Similarity=0.497 Sum_probs=64.4
Q ss_pred EEEeccCCCcCEEEEEEccCCC-EEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEcc-CCCEEEEecCCCcEE
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQH-TLISGGDDGSICMWNLNSKLC---------DSAVRSISFCS-KQRTLISGGDDGSIC 73 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~-~~~~~~~~~~~~~i~ 73 (84)
+.+...| ++.|..++|++.+. .|++|..+|.|.+||++.... ...|.+++|.. ..+++++++.++.+.
T Consensus 109 la~~~~h-~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~ 187 (1049)
T KOG0307|consen 109 LATKSKH-TGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAV 187 (1049)
T ss_pred Hhhhccc-CCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCce
Confidence 4455677 99999999999654 999999999999999987544 56799999985 456788888899999
Q ss_pred EEeCCCCee
Q psy16880 74 MWNLNSKLC 82 (84)
Q Consensus 74 ~~~~~~~~~ 82 (84)
+||++.++.
T Consensus 188 iWDlr~~~p 196 (1049)
T KOG0307|consen 188 IWDLRKKKP 196 (1049)
T ss_pred eccccCCCc
Confidence 999997764
No 139
>KOG2096|consensus
Probab=99.13 E-value=8.1e-10 Score=60.78 Aligned_cols=76 Identities=14% Similarity=0.281 Sum_probs=61.7
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------------CCCEEEEEEccCCCEEEEe
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------------DSAVRSISFCSKQRTLISG 66 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------------~~~v~~~~~~~~~~~~~~~ 66 (84)
|+.+..+... ...-...+.+|+|+++++++....+.+|.+--.+- ...|...+|+++.+.++++
T Consensus 218 Gq~L~~idtn-q~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtv 296 (420)
T KOG2096|consen 218 GQLLQSIDTN-QSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTV 296 (420)
T ss_pred Cceeeeeccc-cccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEE
Confidence 5566666554 44445668899999999999999999998742221 6679999999999999999
Q ss_pred cCCCcEEEEeCC
Q psy16880 67 GDDGSICMWNLN 78 (84)
Q Consensus 67 ~~~~~i~~~~~~ 78 (84)
+.||++++||..
T Consensus 297 SkDG~wriwdtd 308 (420)
T KOG2096|consen 297 SKDGKWRIWDTD 308 (420)
T ss_pred ecCCcEEEeecc
Confidence 999999999875
No 140
>KOG0299|consensus
Probab=99.13 E-value=9.5e-10 Score=62.42 Aligned_cols=69 Identities=22% Similarity=0.433 Sum_probs=62.6
Q ss_pred cCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 10 HSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 10 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
.| ...+.+++.++++++|++|+.+..+.+|+..+... ++.|.+++|......+.+++.|+.+++|++..
T Consensus 200 ~h-~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~ 275 (479)
T KOG0299|consen 200 GH-VKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQ 275 (479)
T ss_pred cc-cceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhH
Confidence 56 78899999999999999999999999999988766 77899999998888899999999999998754
No 141
>KOG0646|consensus
Probab=99.11 E-value=1.1e-09 Score=62.21 Aligned_cols=66 Identities=21% Similarity=0.519 Sum_probs=61.2
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (84)
+++|.++.-+|.|.+++.|.-.+.+.+|.+.++.. .+.|+++.|+.++.++++++.||.+.+|.+.
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~ 153 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLT 153 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEE
Confidence 57899999999999999998999999999998877 7889999999999999999999999999753
No 142
>KOG0771|consensus
Probab=99.11 E-value=9.3e-10 Score=61.66 Aligned_cols=65 Identities=28% Similarity=0.583 Sum_probs=57.3
Q ss_pred EEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 17 RSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
.+++++.++..+++++.||.+++|+...... ...|.++.|+|+++.+++.+.+ ...+|+.+++.+
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~ 219 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAA 219 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCch
Confidence 6889999999999999999999999654433 7889999999999999999988 899999988743
No 143
>KOG0649|consensus
Probab=99.10 E-value=3.2e-09 Score=56.72 Aligned_cols=79 Identities=20% Similarity=0.463 Sum_probs=60.8
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----------------CCCEEEEEEccCCCEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----------------DSAVRSISFCSKQRTL 63 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----------------~~~v~~~~~~~~~~~~ 63 (84)
+|+..+++++| ++-|.++.--.....+++|+.||.+++||.++.+. ...|-+++. +..++
T Consensus 145 ~G~i~r~~rGH-tDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWl 221 (325)
T KOG0649|consen 145 DGRIQREYRGH-TDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWL 221 (325)
T ss_pred CCEEEEEEcCC-cceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec--cCceE
Confidence 58889999999 99999987755667888999999999999998766 223444443 45577
Q ss_pred EEecCCCcEEEEeCCCCeec
Q psy16880 64 ISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 64 ~~~~~~~~i~~~~~~~~~~~ 83 (84)
++|+ ...+.+|.++..++.
T Consensus 222 vCGg-Gp~lslwhLrsse~t 240 (325)
T KOG0649|consen 222 VCGG-GPKLSLWHLRSSEST 240 (325)
T ss_pred EecC-CCceeEEeccCCCce
Confidence 7664 567999999877653
No 144
>KOG2445|consensus
Probab=99.09 E-value=2.5e-09 Score=58.47 Aligned_cols=71 Identities=11% Similarity=0.302 Sum_probs=58.9
Q ss_pred EeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----------CCCEEEEEEc-c-CCCEEEEecCCCcEE
Q psy16880 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----------DSAVRSISFC-S-KQRTLISGGDDGSIC 73 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----------~~~v~~~~~~-~-~~~~~~~~~~~~~i~ 73 (84)
.++.-|.+-|.++.|.+.|+.+++++.|+.+.+||.+.... .+.|..+.|. | .|..+++++.|+++.
T Consensus 7 pi~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~ 86 (361)
T KOG2445|consen 7 PIDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVS 86 (361)
T ss_pred ccccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCcee
Confidence 33332388899999999999999999999999999754443 6778899986 3 578999999999999
Q ss_pred EEeC
Q psy16880 74 MWNL 77 (84)
Q Consensus 74 ~~~~ 77 (84)
+|.=
T Consensus 87 iWEE 90 (361)
T KOG2445|consen 87 IWEE 90 (361)
T ss_pred eeee
Confidence 9953
No 145
>KOG0322|consensus
Probab=99.09 E-value=7.5e-10 Score=59.49 Aligned_cols=63 Identities=17% Similarity=0.361 Sum_probs=57.5
Q ss_pred CEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 15 AVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
.|..+..-||++.+++++.|+.+++|..++... ...|.+++|+|+...++.++.|..|.+|++
T Consensus 253 Gv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 253 GVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred CccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 356778889999999999999999999988876 788999999999999999999999999986
No 146
>KOG0270|consensus
Probab=99.09 E-value=2.8e-10 Score=64.24 Aligned_cols=70 Identities=20% Similarity=0.405 Sum_probs=60.5
Q ss_pred ccCCCcCEEEEEEccCC-CEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccC-CCEEEEecCCCcEEEEeCCC
Q psy16880 9 VHSNNSAVRSISFCSKQ-HTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSK-QRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 9 ~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 79 (84)
++| ++.|..++|+..- ..|++|+.|.++.+||+.++.+ ...|.++.|+|. ...+++|+.|+++.+.|.+.
T Consensus 240 ~gH-Tdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~ 318 (463)
T KOG0270|consen 240 SGH-TDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRD 318 (463)
T ss_pred ccc-hHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccC
Confidence 356 8888999998854 6889999999999999998877 778999999985 46778999999999999884
No 147
>KOG0639|consensus
Probab=99.08 E-value=6.2e-10 Score=64.30 Aligned_cols=71 Identities=23% Similarity=0.491 Sum_probs=60.3
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
.+-|.++...|+++.|+.|+.-..+.+||+..... .-..+.++.+|+.+...+++.||.|.|||+++.-.+
T Consensus 465 dnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~V 544 (705)
T KOG0639|consen 465 DNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLV 544 (705)
T ss_pred ccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceee
Confidence 45688889999999999999999999999976654 234677888999999999999999999999876544
No 148
>KOG0268|consensus
Probab=99.08 E-value=1.1e-09 Score=60.88 Aligned_cols=76 Identities=24% Similarity=0.357 Sum_probs=56.5
Q ss_pred eEEEeccCCCcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC-----------------------------------
Q psy16880 4 IIHTFVHSNNSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC----------------------------------- 47 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~----------------------------------- 47 (84)
++..+.-. ...|.+++|+|. ...|+++..|+.+.+||+++..+
T Consensus 179 Pv~smswG-~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~D 257 (433)
T KOG0268|consen 179 PVSSMSWG-ADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYD 257 (433)
T ss_pred ccceeecC-CCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceecCccccceeeccccccceehh
Confidence 33444433 456778888884 45677777888888888886654
Q ss_pred --------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy16880 48 --------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 48 --------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 80 (84)
.+.|..+.|+|.|..+++++.|.+|++|..+.+
T Consensus 258 mR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~ 304 (433)
T KOG0268|consen 258 MRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHG 304 (433)
T ss_pred hhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCC
Confidence 346778889999999999999999999977644
No 149
>KOG0301|consensus
Probab=99.08 E-value=1.3e-09 Score=64.49 Aligned_cols=75 Identities=27% Similarity=0.586 Sum_probs=60.4
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
|++++++.+| ++.|..+++-+++ .|+++++||.+++|++..... .+.+++++...+...+++++.|+++++|
T Consensus 169 ~~~l~tf~gH-tD~VRgL~vl~~~-~flScsNDg~Ir~w~~~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW 246 (745)
T KOG0301|consen 169 GTLLKTFSGH-TDCVRGLAVLDDS-HFLSCSNDGSIRLWDLDGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIW 246 (745)
T ss_pred Cchhhhhccc-hhheeeeEEecCC-CeEeecCCceEEEEeccCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEe
Confidence 5677888898 9999999888644 566888999999999955444 6778888876677788999999999999
Q ss_pred eCC
Q psy16880 76 NLN 78 (84)
Q Consensus 76 ~~~ 78 (84)
+..
T Consensus 247 ~~~ 249 (745)
T KOG0301|consen 247 KKD 249 (745)
T ss_pred ecC
Confidence 754
No 150
>KOG1036|consensus
Probab=99.07 E-value=6.7e-09 Score=56.63 Aligned_cols=72 Identities=19% Similarity=0.374 Sum_probs=60.4
Q ss_pred EeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy16880 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 80 (84)
.+..| ...|.+|.+.+....+++|+.|+.+++||.+.... ...|.++... +..+++++.+..+.+||+++.
T Consensus 89 ~igth-~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~ 165 (323)
T KOG1036|consen 89 QIGTH-DEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNL 165 (323)
T ss_pred eeccC-CCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEEecc--CCEEEEeecCceEEEEEcccc
Confidence 34456 88999999999889999999999999999986444 5678888765 567889899999999999876
Q ss_pred e
Q psy16880 81 L 81 (84)
Q Consensus 81 ~ 81 (84)
.
T Consensus 166 ~ 166 (323)
T KOG1036|consen 166 D 166 (323)
T ss_pred c
Confidence 5
No 151
>KOG0288|consensus
Probab=99.06 E-value=8.6e-10 Score=62.05 Aligned_cols=61 Identities=20% Similarity=0.482 Sum_probs=55.3
Q ss_pred CEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 15 AVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
.+..+.|+|++.++++|+.++.+.+|+..+++. ...|.+++|+|.|..+++++.+..+.+|
T Consensus 389 DwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 389 DWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred ccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 467788999999999999999999999998877 3369999999999999999999999998
No 152
>KOG4328|consensus
Probab=99.06 E-value=9.1e-10 Score=62.57 Aligned_cols=73 Identities=16% Similarity=0.254 Sum_probs=60.3
Q ss_pred EEEeccCCCcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC-----------CCCEEEEEEccCCCEEEEecCCCcE
Q psy16880 5 IHTFVHSNNSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC-----------DSAVRSISFCSKQRTLISGGDDGSI 72 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~~i 72 (84)
...++-| ...|..|+++|. ..++++++.|+..++||++.... ...|.+..|+|.+-.+++-+.|+.|
T Consensus 315 ~~~~~lh-~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~I 393 (498)
T KOG4328|consen 315 YENLRLH-KKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEI 393 (498)
T ss_pred chhhhhh-hcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCce
Confidence 3344556 678999999995 56889999999999999975533 5578999999987779999999999
Q ss_pred EEEeCC
Q psy16880 73 CMWNLN 78 (84)
Q Consensus 73 ~~~~~~ 78 (84)
++||..
T Consensus 394 Rv~dss 399 (498)
T KOG4328|consen 394 RVFDSS 399 (498)
T ss_pred EEeecc
Confidence 999973
No 153
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=99.06 E-value=4.7e-09 Score=61.18 Aligned_cols=66 Identities=17% Similarity=0.351 Sum_probs=58.9
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----CCCEEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----DSAVRSISFCSKQRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (84)
++.+.+++++|+...++.|+.||.+.+||...... .-.+..++|+|++.++++++..|.+.+||..
T Consensus 259 ~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 259 PSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred CCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 56788999999999999999999999999876544 5567889999999999999999999999975
No 154
>KOG3881|consensus
Probab=99.06 E-value=2.6e-09 Score=59.76 Aligned_cols=80 Identities=15% Similarity=0.255 Sum_probs=70.3
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
+++..+.-. +.++.++...|.+.++++|...+.+..||++.+.. .+.++.+..+|+.+.+++++-|+.++|
T Consensus 238 RPV~~fd~~-E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRI 316 (412)
T KOG3881|consen 238 RPVAQFDFL-ENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRI 316 (412)
T ss_pred cceeEeccc-cCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEE
Confidence 356666666 78889999999999999999999999999998766 678999999999999999999999999
Q ss_pred EeCCCCeec
Q psy16880 75 WNLNSKLCD 83 (84)
Q Consensus 75 ~~~~~~~~~ 83 (84)
+|..+.+.+
T Consensus 317 hD~ktrkll 325 (412)
T KOG3881|consen 317 HDIKTRKLL 325 (412)
T ss_pred eecccchhh
Confidence 999986654
No 155
>KOG0321|consensus
Probab=99.05 E-value=6.1e-10 Score=65.43 Aligned_cols=71 Identities=21% Similarity=0.499 Sum_probs=60.8
Q ss_pred ccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccC-CCEEEEecCCCcEEEEeCC
Q psy16880 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSK-QRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 9 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 78 (84)
..| .+.|+++.|.|....|++++.|..+++||+.+... ...|..++|.|. ...+++|+.|+.|.|||++
T Consensus 97 ~aH-~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R 175 (720)
T KOG0321|consen 97 LAH-KNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCR 175 (720)
T ss_pred ccc-cceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEe
Confidence 346 89999999999778999999999999999987765 567888999984 4677899999999999987
Q ss_pred CC
Q psy16880 79 SK 80 (84)
Q Consensus 79 ~~ 80 (84)
..
T Consensus 176 ~n 177 (720)
T KOG0321|consen 176 CN 177 (720)
T ss_pred cc
Confidence 54
No 156
>KOG0270|consensus
Probab=99.05 E-value=7.2e-09 Score=58.79 Aligned_cols=79 Identities=16% Similarity=0.407 Sum_probs=66.6
Q ss_pred CCceEEEeccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCC-EEEEecCCCc
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQR-TLISGGDDGS 71 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~-~~~~~~~~~~ 71 (84)
+|++..++..| .+.|.++.|+| ....|++|+.++++.+.|.+.... .+.|-.+.|.|... .++++..||+
T Consensus 275 ~g~p~~s~~~~-~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~ 353 (463)
T KOG0270|consen 275 TGKPKSSITHH-GKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGT 353 (463)
T ss_pred CCCcceehhhc-CCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEecCCce
Confidence 47888888877 99999999999 568999999999999999985433 67899999998664 5566778899
Q ss_pred EEEEeCCCC
Q psy16880 72 ICMWNLNSK 80 (84)
Q Consensus 72 i~~~~~~~~ 80 (84)
++-+|.|+.
T Consensus 354 v~~~D~R~~ 362 (463)
T KOG0270|consen 354 VYYFDIRNP 362 (463)
T ss_pred EEeeecCCC
Confidence 999999865
No 157
>KOG1538|consensus
Probab=99.04 E-value=3.2e-09 Score=63.36 Aligned_cols=76 Identities=20% Similarity=0.365 Sum_probs=64.9
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------------------------------
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------------------------------- 47 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------------------------------- 47 (84)
.|..++++++| ++.|.+++|+.+|..+++|+.|..+.+|.......
T Consensus 42 dG~llqtLKgH-KDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS 120 (1081)
T KOG1538|consen 42 DGTLLQPLKGH-KDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWS 120 (1081)
T ss_pred Ccccccccccc-cceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhhccccC
Confidence 36778899999 99999999999999999999999999997653322
Q ss_pred -----------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 48 -----------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 48 -----------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
...+.+.+|..+|.+++.|-.+|+|.+-+-
T Consensus 121 ~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk 161 (1081)
T KOG1538|consen 121 PEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK 161 (1081)
T ss_pred hhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecC
Confidence 456788889999999999999999988753
No 158
>KOG0299|consensus
Probab=99.03 E-value=5.1e-09 Score=59.58 Aligned_cols=78 Identities=17% Similarity=0.369 Sum_probs=66.3
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------------------------CCCEEEEEEccCC
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------------------------DSAVRSISFCSKQ 60 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------------------------~~~v~~~~~~~~~ 60 (84)
+.+..| .-.+.++..+|+.++.++++.++.+.-|++.++.. ...+.+++.++++
T Consensus 136 ~~~~~H-~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg 214 (479)
T KOG0299|consen 136 RVIGKH-QLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG 214 (479)
T ss_pred eeeccc-cCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence 344556 77889999999999999999999999998876542 2468899999999
Q ss_pred CEEEEecCCCcEEEEeCCCCeecC
Q psy16880 61 RTLISGGDDGSICMWNLNSKLCDR 84 (84)
Q Consensus 61 ~~~~~~~~~~~i~~~~~~~~~~~~ 84 (84)
+++++++.|..|.||+..+.+.++
T Consensus 215 kylatgg~d~~v~Iw~~~t~ehv~ 238 (479)
T KOG0299|consen 215 KYLATGGRDRHVQIWDCDTLEHVK 238 (479)
T ss_pred cEEEecCCCceEEEecCcccchhh
Confidence 999999999999999999887653
No 159
>KOG0649|consensus
Probab=99.03 E-value=3e-09 Score=56.83 Aligned_cols=70 Identities=17% Similarity=0.364 Sum_probs=57.1
Q ss_pred cCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
-.|.+|...|....++.++.|+.+..||+.++.. ...+.++.-......+++|+.||++++||.++.+++
T Consensus 115 PeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v 191 (325)
T KOG0649|consen 115 PEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHV 191 (325)
T ss_pred CccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEecccccee
Confidence 3578999998766666666899999999998876 456888877555567999999999999999998875
No 160
>KOG2055|consensus
Probab=99.03 E-value=3.3e-09 Score=60.51 Aligned_cols=76 Identities=26% Similarity=0.573 Sum_probs=61.1
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEE--EEEccCCCEEEEecCCCcEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRS--ISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~--~~~~~~~~~~~~~~~~~~i~ 73 (84)
++.+..+.. ++.|..++|+.++..+++.+.+|.|.+||++.... .+.|++ ++.++++.++++|+..|.+.
T Consensus 335 ~eli~s~Ki--eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVN 412 (514)
T KOG2055|consen 335 KELITSFKI--EGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVN 412 (514)
T ss_pred hhhhheeee--ccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEE
Confidence 344445544 68899999999999999999999999999998766 455544 55568999999999999999
Q ss_pred EEeCCC
Q psy16880 74 MWNLNS 79 (84)
Q Consensus 74 ~~~~~~ 79 (84)
|||..+
T Consensus 413 IYd~~s 418 (514)
T KOG2055|consen 413 IYDGNS 418 (514)
T ss_pred Eeccch
Confidence 998653
No 161
>KOG0321|consensus
Probab=99.02 E-value=2.3e-09 Score=63.11 Aligned_cols=73 Identities=27% Similarity=0.509 Sum_probs=56.1
Q ss_pred eccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC--------------------------------------C
Q psy16880 8 FVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC--------------------------------------D 48 (84)
Q Consensus 8 ~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~--------------------------------------~ 48 (84)
+-+| +..|.+++|.+ +...|++|+.|+.+.+||++-... .
T Consensus 140 ~~GH-~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ 218 (720)
T KOG0321|consen 140 NLGH-TGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIF 218 (720)
T ss_pred eccc-ccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCcee
Confidence 5677 89999999999 567999999999999999975432 2
Q ss_pred CCEEEEEEccCCCEEEEecC-CCcEEEEeCCCCee
Q psy16880 49 SAVRSISFCSKQRTLISGGD-DGSICMWNLNSKLC 82 (84)
Q Consensus 49 ~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~ 82 (84)
+.|+.+.| .+...+++++. |+.|++||++..++
T Consensus 219 ssvTvv~f-kDe~tlaSaga~D~~iKVWDLRk~~~ 252 (720)
T KOG0321|consen 219 SSVTVVLF-KDESTLASAGAADSTIKVWDLRKNYT 252 (720)
T ss_pred eeeEEEEE-eccceeeeccCCCcceEEEeeccccc
Confidence 23444444 45566777766 99999999987654
No 162
>KOG2048|consensus
Probab=99.01 E-value=7.6e-09 Score=61.14 Aligned_cols=69 Identities=26% Similarity=0.445 Sum_probs=57.5
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
+++|.+++|++++..+++|+.|+.+++||...+.. +.-|.++.|-.++ .+++|...|++.+||.
T Consensus 154 ~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~ 232 (691)
T KOG2048|consen 154 KSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDS 232 (691)
T ss_pred cceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEcc
Confidence 68999999999999999999999999999986644 2246777776555 5889999999999998
Q ss_pred CCCee
Q psy16880 78 NSKLC 82 (84)
Q Consensus 78 ~~~~~ 82 (84)
..+..
T Consensus 233 ~~gTL 237 (691)
T KOG2048|consen 233 IFGTL 237 (691)
T ss_pred cCcch
Confidence 76543
No 163
>KOG0280|consensus
Probab=99.01 E-value=7e-09 Score=56.49 Aligned_cols=74 Identities=23% Similarity=0.370 Sum_probs=59.5
Q ss_pred EEeccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEcc-CCCEEEEecCCCcEEE
Q psy16880 6 HTFVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCS-KQRTLISGGDDGSICM 74 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~-~~~~~~~~~~~~~i~~ 74 (84)
++.+.| +.+++..+|+. +...+.+|+.|+.+..||++.+.. ...|.++.-+| .+..+++|+.|..|++
T Consensus 159 q~wk~H-e~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~ 237 (339)
T KOG0280|consen 159 QTWKVH-EFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRV 237 (339)
T ss_pred cccccc-ceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceee
Confidence 355667 77888888887 557899999999999999994433 45677777764 6789999999999999
Q ss_pred EeCCCC
Q psy16880 75 WNLNSK 80 (84)
Q Consensus 75 ~~~~~~ 80 (84)
||.++.
T Consensus 238 ~DtRnm 243 (339)
T KOG0280|consen 238 LDTRNM 243 (339)
T ss_pred eehhcc
Confidence 999853
No 164
>KOG2321|consensus
Probab=99.01 E-value=5e-09 Score=61.31 Aligned_cols=81 Identities=19% Similarity=0.384 Sum_probs=68.4
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------------------CCCEEEEEEccCCCEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------------------DSAVRSISFCSKQRTL 63 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------------------~~~v~~~~~~~~~~~~ 63 (84)
|+.+..++.. .+.+.++..++...++++|..++.+.+||.+.... ...|+++.|+.++-.+
T Consensus 165 GrfL~P~~~~-~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~ 243 (703)
T KOG2321|consen 165 GRFLNPFETD-SGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHV 243 (703)
T ss_pred cccccccccc-cccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeE
Confidence 5556666665 68899999999999999999999999999986654 1248999999989889
Q ss_pred EEecCCCcEEEEeCCCCeec
Q psy16880 64 ISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 64 ~~~~~~~~i~~~~~~~~~~~ 83 (84)
++|..+|.+.+||+++.+++
T Consensus 244 aVGts~G~v~iyDLRa~~pl 263 (703)
T KOG2321|consen 244 AVGTSTGSVLIYDLRASKPL 263 (703)
T ss_pred EeeccCCcEEEEEcccCCce
Confidence 99999999999999987764
No 165
>KOG3914|consensus
Probab=99.00 E-value=3.4e-09 Score=59.30 Aligned_cols=75 Identities=17% Similarity=0.302 Sum_probs=61.4
Q ss_pred eccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 8 FVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 8 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
+-+| .+.+..++|+||.++++++..|..+++-.+..... ..-|..++.-++. .+++++.|+++++||+.+
T Consensus 147 ~lGh-vSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD~tlr~Wd~~s 224 (390)
T KOG3914|consen 147 ILGH-VSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGDKTLRLWDITS 224 (390)
T ss_pred hhhh-hhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc-eeeecCCCCcEEEEeccc
Confidence 3467 88899999999999999999999999866544333 4568888887765 488999999999999999
Q ss_pred CeecC
Q psy16880 80 KLCDR 84 (84)
Q Consensus 80 ~~~~~ 84 (84)
+++++
T Consensus 225 gk~L~ 229 (390)
T KOG3914|consen 225 GKLLD 229 (390)
T ss_pred CCccc
Confidence 88753
No 166
>KOG4227|consensus
Probab=99.00 E-value=9.9e-09 Score=58.13 Aligned_cols=79 Identities=18% Similarity=0.200 Sum_probs=68.5
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
+++.....||.+.|++++|.....++.+|..++++.+.|+.+... ++.|+++..+|....+++++.++.+.
T Consensus 95 KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~ 174 (609)
T KOG4227|consen 95 KPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVS 174 (609)
T ss_pred CCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEE
Confidence 556666666579999999999999999999999999999987655 56899999999888999999999999
Q ss_pred EEeCCCCe
Q psy16880 74 MWNLNSKL 81 (84)
Q Consensus 74 ~~~~~~~~ 81 (84)
+||.+..+
T Consensus 175 ~~D~Rd~~ 182 (609)
T KOG4227|consen 175 FIDNRDRQ 182 (609)
T ss_pred EEeccCCC
Confidence 99987654
No 167
>KOG1188|consensus
Probab=98.99 E-value=1.2e-08 Score=56.42 Aligned_cols=73 Identities=18% Similarity=0.309 Sum_probs=61.2
Q ss_pred ccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC----------CCCEEEEEEccCC-CEEEEecCCCcEEEEe
Q psy16880 9 VHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC----------DSAVRSISFCSKQ-RTLISGGDDGSICMWN 76 (84)
Q Consensus 9 ~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~-~~~~~~~~~~~i~~~~ 76 (84)
+.| .+.|++++|+| +..+|++|+-||.+.+||+..... ...|..+.|...+ +.+.+-++.....+|+
T Consensus 162 eSH-~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~e 240 (376)
T KOG1188|consen 162 ESH-NDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYE 240 (376)
T ss_pred hhc-cCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEE
Confidence 445 89999999999 568999999999999999986654 5679999998765 4578888899999999
Q ss_pred CCCCee
Q psy16880 77 LNSKLC 82 (84)
Q Consensus 77 ~~~~~~ 82 (84)
++.+.+
T Consensus 241 le~~~~ 246 (376)
T KOG1188|consen 241 LEDGSE 246 (376)
T ss_pred ccCCCh
Confidence 886653
No 168
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.97 E-value=4.5e-08 Score=53.08 Aligned_cols=79 Identities=14% Similarity=0.237 Sum_probs=58.9
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEE-EEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEE-ecCCCcEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTL-ISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLIS-GGDDGSIC 73 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~-~~~~~~i~ 73 (84)
++++..++.+ . .+..++|+|++..+ +++..++.+.+||..+... ...+..+.|+|+++.++. +..++.+.
T Consensus 21 ~~~~~~~~~~-~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~ 98 (300)
T TIGR03866 21 LEVTRTFPVG-Q-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANEDDNLVT 98 (300)
T ss_pred CceEEEEECC-C-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCCCCeEE
Confidence 5566676654 3 35679999999866 5677889999999876544 334677889999886654 45678999
Q ss_pred EEeCCCCee
Q psy16880 74 MWNLNSKLC 82 (84)
Q Consensus 74 ~~~~~~~~~ 82 (84)
+||+.+.+.
T Consensus 99 ~~d~~~~~~ 107 (300)
T TIGR03866 99 VIDIETRKV 107 (300)
T ss_pred EEECCCCeE
Confidence 999987654
No 169
>KOG0650|consensus
Probab=98.95 E-value=1.9e-08 Score=59.25 Aligned_cols=72 Identities=25% Similarity=0.428 Sum_probs=56.9
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCE-EEEecCCCcEEEEe
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRT-LISGGDDGSICMWN 76 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~-~~~~~~~~~i~~~~ 76 (84)
+-..+.+| ++.|.+++..|.|..|++|+.+|.+++|.+.++.+ ...|.+++|+|.+.. ++.+.....+.+-+
T Consensus 392 ~~lvyrGH-tg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivn 470 (733)
T KOG0650|consen 392 CALVYRGH-TGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVN 470 (733)
T ss_pred eeeeEecc-CCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeC
Confidence 34567888 99999999999999999999999999999998877 778999999997642 23333333344443
No 170
>KOG2055|consensus
Probab=98.95 E-value=1.6e-08 Score=57.84 Aligned_cols=71 Identities=14% Similarity=0.382 Sum_probs=62.1
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCC-EEEEecCCCcEEEEeCCCCee
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQR-TLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~ 82 (84)
.+.|.+|.|+|....+++++.|+.+++|.+..... ..+|.+.+|.|+|. .+++++....++.||+.+.+.
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~ 292 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV 292 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence 47899999999999999999999999999875433 67899999999998 788888889999999987764
Q ss_pred c
Q psy16880 83 D 83 (84)
Q Consensus 83 ~ 83 (84)
.
T Consensus 293 ~ 293 (514)
T KOG2055|consen 293 T 293 (514)
T ss_pred c
Confidence 3
No 171
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.93 E-value=5.1e-08 Score=55.29 Aligned_cols=81 Identities=10% Similarity=0.217 Sum_probs=59.0
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEec-CCCcEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGG-DDGSICM 74 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~-~~~~i~~ 74 (84)
.+.+.+++.. ......+.++|+++++..++.++.+.++|+.+.+. .....++++++++++++++. ..+.+.+
T Consensus 26 ~~~~~~i~~~-~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~~~~v~v 104 (369)
T PF02239_consen 26 NKVVARIPTG-GAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANYEPGTVSV 104 (369)
T ss_dssp -SEEEEEE-S-TTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEEETTEEEE
T ss_pred CeEEEEEcCC-CCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEecCCCceeE
Confidence 4566777664 34445577899999998889999999999988776 56678999999999888775 4789999
Q ss_pred EeCCCCeec
Q psy16880 75 WNLNSKLCD 83 (84)
Q Consensus 75 ~~~~~~~~~ 83 (84)
+|.++.+.+
T Consensus 105 ~D~~tle~v 113 (369)
T PF02239_consen 105 IDAETLEPV 113 (369)
T ss_dssp EETTT--EE
T ss_pred eccccccce
Confidence 999887765
No 172
>KOG1332|consensus
Probab=98.93 E-value=5.6e-09 Score=55.72 Aligned_cols=76 Identities=13% Similarity=0.249 Sum_probs=61.9
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------CCCEEEEEEc-c-CCCEEEEecCCCcEE
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------DSAVRSISFC-S-KQRTLISGGDDGSIC 73 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------~~~v~~~~~~-~-~~~~~~~~~~~~~i~ 73 (84)
+++...|++.|......--|.+|++++.|+.+++++.+.... +++|..++|. | .|.++++++.|+.+.
T Consensus 4 q~idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVI 83 (299)
T KOG1332|consen 4 QTIDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVI 83 (299)
T ss_pred eehhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEE
Confidence 334333378887777777899999999999999999975543 7899999996 4 789999999999999
Q ss_pred EEeCCCCe
Q psy16880 74 MWNLNSKL 81 (84)
Q Consensus 74 ~~~~~~~~ 81 (84)
+|.-.++.
T Consensus 84 iWke~~g~ 91 (299)
T KOG1332|consen 84 IWKEENGR 91 (299)
T ss_pred EEecCCCc
Confidence 99877664
No 173
>KOG0301|consensus
Probab=98.92 E-value=2.9e-08 Score=59.05 Aligned_cols=76 Identities=20% Similarity=0.436 Sum_probs=64.5
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
+|.++.++.+| ++-|.+++...+...+++++.|+.+++|+...... ...+.++.+-+++. +++|+.||.+++|
T Consensus 208 ~ge~l~~~~gh-tn~vYsis~~~~~~~Ivs~gEDrtlriW~~~e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVf 285 (745)
T KOG0301|consen 208 DGEVLLEMHGH-TNFVYSISMALSDGLIVSTGEDRTLRIWKKDECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVF 285 (745)
T ss_pred cCceeeeeecc-ceEEEEEEecCCCCeEEEecCCceEEEeecCceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEE
Confidence 57889999999 99999999888899999999999999999873322 34788888888887 7788889999999
Q ss_pred eCC
Q psy16880 76 NLN 78 (84)
Q Consensus 76 ~~~ 78 (84)
...
T Consensus 286 T~~ 288 (745)
T KOG0301|consen 286 TVD 288 (745)
T ss_pred Eec
Confidence 764
No 174
>KOG1274|consensus
Probab=98.89 E-value=3.6e-08 Score=60.08 Aligned_cols=71 Identities=21% Similarity=0.426 Sum_probs=62.7
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
+-++.+++++-+|..++.|+.|-.|++-+...... ..+|.++.|.|++.++++.+.||.+++|++.++.+.
T Consensus 96 tlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~ 173 (933)
T KOG1274|consen 96 TLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILS 173 (933)
T ss_pred eccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhh
Confidence 45688999999999999999999999988866544 789999999999999999999999999999887643
No 175
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.88 E-value=1e-07 Score=51.74 Aligned_cols=67 Identities=10% Similarity=0.179 Sum_probs=52.1
Q ss_pred EEEEEccCCCEEEE-eCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEe-cCCCcEEEEeCCCCeec
Q psy16880 17 RSISFCSKQHTLIS-GGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISG-GDDGSICMWNLNSKLCD 83 (84)
Q Consensus 17 ~~~~~~~~~~~l~~-~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~ 83 (84)
..++|+|+++.++. ...+..+.+||..+... ...+.+++|+|++..++++ ..++.|.+||+.+++++
T Consensus 210 ~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~ 284 (300)
T TIGR03866 210 VGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVI 284 (300)
T ss_pred cceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEE
Confidence 35788999987544 45566799999976554 4568899999999988775 45899999999988764
No 176
>KOG2106|consensus
Probab=98.88 E-value=8.6e-08 Score=55.67 Aligned_cols=66 Identities=11% Similarity=0.270 Sum_probs=51.8
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
..+..+.+|+|.+ .++.|...|...+.|..+... ..+++++.|+|+|.+++.++.|+.|.+|.+..
T Consensus 407 ~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~ 478 (626)
T KOG2106|consen 407 EDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSA 478 (626)
T ss_pred cCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECC
Confidence 4556677777777 777777777777777665433 67899999999999999999999999998753
No 177
>KOG4378|consensus
Probab=98.86 E-value=3.6e-08 Score=57.20 Aligned_cols=66 Identities=23% Similarity=0.489 Sum_probs=55.0
Q ss_pred EEEEEEccCCC-EEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEcc-CCCEEEEecCCCcEEEEeCCCCe
Q psy16880 16 VRSISFCSKQH-TLISGGDDGSICMWNLNSKLC--------DSAVRSISFCS-KQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 16 v~~~~~~~~~~-~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
|.-++|+|..+ +|.+++.+|.|.+||...... ..+..+++|+| +..++++++.|..|.+||.+..+
T Consensus 167 vRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~ 242 (673)
T KOG4378|consen 167 VRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQA 242 (673)
T ss_pred EEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeeccccc
Confidence 55789999765 567889999999999987655 66789999998 45677899999999999998654
No 178
>KOG2110|consensus
Probab=98.85 E-value=1e-07 Score=53.34 Aligned_cols=71 Identities=10% Similarity=0.166 Sum_probs=55.5
Q ss_pred CcCEEEEEEccCCCEEEEe--CCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCc-EEEEeCCCCee
Q psy16880 13 NSAVRSISFCSKQHTLISG--GDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGS-ICMWNLNSKLC 82 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~--~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~ 82 (84)
...+.+++.+..+.+++-. ...|.+.+||..+... ++.+.+++|+++|.++++++..|+ |+++.+.+++.
T Consensus 129 ~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~k 208 (391)
T KOG2110|consen 129 PKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQK 208 (391)
T ss_pred ccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccE
Confidence 3445566655555677644 3467999999987665 889999999999999999999887 78999988775
Q ss_pred c
Q psy16880 83 D 83 (84)
Q Consensus 83 ~ 83 (84)
+
T Consensus 209 l 209 (391)
T KOG2110|consen 209 L 209 (391)
T ss_pred e
Confidence 4
No 179
>KOG0974|consensus
Probab=98.85 E-value=7.3e-08 Score=59.27 Aligned_cols=70 Identities=23% Similarity=0.400 Sum_probs=62.3
Q ss_pred EeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy16880 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (84)
.+.+| ++.|+.+.++.+|+++++.+.|+.+++|++.+.+. ...+..++|.|+ .+++++.|.+.++|+..
T Consensus 170 ~l~GH-eG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~ 246 (967)
T KOG0974|consen 170 RLKGH-EGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN 246 (967)
T ss_pred eeccc-CCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc
Confidence 35678 99999999999999999999999999999987766 678899999988 79999999999999654
Q ss_pred C
Q psy16880 79 S 79 (84)
Q Consensus 79 ~ 79 (84)
.
T Consensus 247 ~ 247 (967)
T KOG0974|consen 247 G 247 (967)
T ss_pred c
Confidence 3
No 180
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.85 E-value=1.9e-08 Score=39.28 Aligned_cols=29 Identities=34% Similarity=0.709 Sum_probs=27.5
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
...|.+++|+|++..+++++.|+.|++||
T Consensus 11 ~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 11 SSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp SSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 57899999999999999999999999997
No 181
>KOG0290|consensus
Probab=98.85 E-value=5.1e-08 Score=53.33 Aligned_cols=70 Identities=14% Similarity=0.282 Sum_probs=55.2
Q ss_pred ceEEEeccCCCcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC------------CCCEEEEEEcc-CCCEEEEecC
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC------------DSAVRSISFCS-KQRTLISGGD 68 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~------------~~~v~~~~~~~-~~~~~~~~~~ 68 (84)
.++..+++| .+.|..++|.|. ...+++++.|....+||+..... ++.|..++|++ +..+++.+.
T Consensus 278 tpva~L~~H-~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~~- 355 (364)
T KOG0290|consen 278 TPVARLRNH-QASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIAICF- 355 (364)
T ss_pred cceehhhcC-cccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEEEEe-
Confidence 467788899 999999999995 57999999999999999976543 77899999996 445665553
Q ss_pred CCcEEE
Q psy16880 69 DGSICM 74 (84)
Q Consensus 69 ~~~i~~ 74 (84)
++.+.+
T Consensus 356 ~kklei 361 (364)
T KOG0290|consen 356 GKKLEI 361 (364)
T ss_pred cCeeeE
Confidence 444443
No 182
>KOG1524|consensus
Probab=98.84 E-value=5.4e-09 Score=60.95 Aligned_cols=77 Identities=23% Similarity=0.473 Sum_probs=60.2
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------------------------------
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------------------------------- 47 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------------------------------- 47 (84)
|+..+.++.| .+.+.+-.|+|+|.-|++++.||.+++|.-...-.
T Consensus 94 ~rVE~sv~AH-~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKp 172 (737)
T KOG1524|consen 94 ARVERSISAH-AAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISIKP 172 (737)
T ss_pred chhhhhhhhh-hhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEEee
Confidence 4445566677 88899999999999999999999999997542211
Q ss_pred -------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 48 -------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 48 -------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
.+.|.++.|++....+++++.|-..++||...
T Consensus 173 L~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G 217 (737)
T KOG1524|consen 173 LAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQG 217 (737)
T ss_pred cccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccC
Confidence 45677788888888888888888888888643
No 183
>KOG2106|consensus
Probab=98.83 E-value=1.9e-07 Score=54.32 Aligned_cols=66 Identities=18% Similarity=0.374 Sum_probs=59.0
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (84)
..++.+|+|+|+|.+|+.|+.|+.+.+|.+..... .+.|.++.|+++++++.+.+.|-.|..|...
T Consensus 447 ~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~ 521 (626)
T KOG2106|consen 447 NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPS 521 (626)
T ss_pred CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEccc
Confidence 67899999999999999999999999998865443 6789999999999999999999999999544
No 184
>KOG0771|consensus
Probab=98.82 E-value=4.6e-08 Score=55.10 Aligned_cols=72 Identities=22% Similarity=0.360 Sum_probs=62.2
Q ss_pred cCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------------------------------------------
Q psy16880 10 HSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------------------------------------------ 47 (84)
Q Consensus 10 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------------------------------------------ 47 (84)
.| .+.|.++.|+|+++++++-+.+ ..++|+.+++..
T Consensus 184 ~~-~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~ 261 (398)
T KOG0771|consen 184 AH-HAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLC 261 (398)
T ss_pred hh-cCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEE
Confidence 35 7889999999999999999999 899999987721
Q ss_pred -------------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 48 -------------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 48 -------------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
...|++++.+++|++++.++.+|.+.+++..+.+++
T Consensus 262 ~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~ 316 (398)
T KOG0771|consen 262 DISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRL 316 (398)
T ss_pred EeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeee
Confidence 236899999999999999999999999998877654
No 185
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.82 E-value=4.7e-07 Score=50.20 Aligned_cols=79 Identities=29% Similarity=0.566 Sum_probs=63.9
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCC-CCcEEEEeCCCCCC-------CCCEEEEEEccCCC-EEEEecCCCcEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGD-DGSICMWNLNSKLC-------DSAVRSISFCSKQR-TLISGGDDGSIC 73 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~-~~~~~~~~~~i~ 73 (84)
.....+..| ...|..++|+|++..++.++. ++.+.+|+...... ...+.++.|+|++. .+++++.|+.+.
T Consensus 146 ~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~ 224 (466)
T COG2319 146 KLIRTLEGH-SESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIR 224 (466)
T ss_pred eEEEEEecC-cccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEE
Confidence 455667777 889999999999998888885 99999999986333 46899999999887 555558899999
Q ss_pred EEeCCCCee
Q psy16880 74 MWNLNSKLC 82 (84)
Q Consensus 74 ~~~~~~~~~ 82 (84)
+||...+..
T Consensus 225 ~wd~~~~~~ 233 (466)
T COG2319 225 LWDLSTGKL 233 (466)
T ss_pred EEECCCCcE
Confidence 998775543
No 186
>KOG0642|consensus
Probab=98.82 E-value=1.3e-08 Score=59.20 Aligned_cols=71 Identities=30% Similarity=0.570 Sum_probs=61.7
Q ss_pred EeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------------CCCEEEEEEccCCCEEEEecCCCc
Q psy16880 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------------DSAVRSISFCSKQRTLISGGDDGS 71 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------------~~~v~~~~~~~~~~~~~~~~~~~~ 71 (84)
++..| ...|..+.+++....|++++.++.+.+|.+..... +++|-|+++.+++..+++++.||.
T Consensus 289 tl~s~-~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~ 367 (577)
T KOG0642|consen 289 TLRSH-DDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGT 367 (577)
T ss_pred eeecc-hhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCce
Confidence 45566 78899999999999999999999999999933211 789999999999999999999999
Q ss_pred EEEEeCC
Q psy16880 72 ICMWNLN 78 (84)
Q Consensus 72 i~~~~~~ 78 (84)
|+.|++.
T Consensus 368 I~~w~~p 374 (577)
T KOG0642|consen 368 IRCWNLP 374 (577)
T ss_pred eeeeccC
Confidence 9999664
No 187
>KOG1240|consensus
Probab=98.82 E-value=8.6e-08 Score=60.30 Aligned_cols=77 Identities=25% Similarity=0.499 Sum_probs=63.9
Q ss_pred CCceEEEeccCCCcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC--------------CCCEEEEEEccCCCEEEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC--------------DSAVRSISFCSKQRTLIS 65 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~--------------~~~v~~~~~~~~~~~~~~ 65 (84)
.|.++..+..| ...+..++.++. +.+|++|+.||.|++|+.+.... ++.+..+...+.+..+++
T Consensus 1037 ~G~lVAhL~Eh-s~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av 1115 (1431)
T KOG1240|consen 1037 RGILVAHLHEH-SSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAV 1115 (1431)
T ss_pred cceEeehhhhc-cccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEE
Confidence 36777888777 777778888774 59999999999999999974432 567888888899999999
Q ss_pred ecCCCcEEEEeCC
Q psy16880 66 GGDDGSICMWNLN 78 (84)
Q Consensus 66 ~~~~~~i~~~~~~ 78 (84)
++.||.|.+.++.
T Consensus 1116 ~t~DG~v~~~~id 1128 (1431)
T KOG1240|consen 1116 STKDGSVRVLRID 1128 (1431)
T ss_pred EcCCCeEEEEEcc
Confidence 9999999998765
No 188
>KOG2139|consensus
Probab=98.80 E-value=1.4e-07 Score=52.96 Aligned_cols=65 Identities=14% Similarity=0.300 Sum_probs=55.7
Q ss_pred CcCEEEEEEccCCCEEEEeCC-CCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 13 NSAVRSISFCSKQHTLISGGD-DGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~-~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
..+|.+|.|.++|..+++++. +..+.+||..++.. .+.++-+.|+|++.++....-|+..++|+.
T Consensus 195 h~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e 267 (445)
T KOG2139|consen 195 HNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQE 267 (445)
T ss_pred CceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehh
Confidence 478999999999988887765 55889999987765 567889999999999999999999999943
No 189
>KOG1007|consensus
Probab=98.80 E-value=3.9e-08 Score=53.74 Aligned_cols=65 Identities=25% Similarity=0.537 Sum_probs=53.6
Q ss_pred CcCEEEEEEccCC-CEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccC-CCEEEEecCCCcEEEEeC
Q psy16880 13 NSAVRSISFCSKQ-HTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSK-QRTLISGGDDGSICMWNL 77 (84)
Q Consensus 13 ~~~v~~~~~~~~~-~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~-~~~~~~~~~~~~i~~~~~ 77 (84)
...|..++|+|+. ..|++++.++.+++||.+..+. ...|.++.|.|. ...+++++.|..+.+|..
T Consensus 214 gq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca 288 (370)
T KOG1007|consen 214 GQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCA 288 (370)
T ss_pred cceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEec
Confidence 5568999999976 4788999999999999986544 457999999984 467789999999999864
No 190
>KOG1009|consensus
Probab=98.80 E-value=8.6e-08 Score=54.14 Aligned_cols=69 Identities=28% Similarity=0.542 Sum_probs=58.6
Q ss_pred cCCCcCEEEEEEccCCC-EEEEeCCCCcEEEEeCCCCCC----------------CCCEEEEEEccCCCEEEEecCCCcE
Q psy16880 10 HSNNSAVRSISFCSKQH-TLISGGDDGSICMWNLNSKLC----------------DSAVRSISFCSKQRTLISGGDDGSI 72 (84)
Q Consensus 10 ~~~~~~v~~~~~~~~~~-~l~~~~~~~~~~~~d~~~~~~----------------~~~v~~~~~~~~~~~~~~~~~~~~i 72 (84)
-|+..++.++.|..+.. .+++|+.|..+++|-++.... ...|.++.|+|++..+++|+.++.+
T Consensus 10 wH~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v 89 (434)
T KOG1009|consen 10 WHDHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEV 89 (434)
T ss_pred ecCCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceE
Confidence 34467899999998765 999999999999998864332 5679999999999999999999999
Q ss_pred EEEeCC
Q psy16880 73 CMWNLN 78 (84)
Q Consensus 73 ~~~~~~ 78 (84)
.+|...
T Consensus 90 ~lWk~~ 95 (434)
T KOG1009|consen 90 FLWKQG 95 (434)
T ss_pred EEEEec
Confidence 999655
No 191
>KOG4227|consensus
Probab=98.79 E-value=3.1e-08 Score=56.19 Aligned_cols=76 Identities=24% Similarity=0.374 Sum_probs=65.2
Q ss_pred EeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCC------C--------CCCEEEEEEccCCCEEEEecCCCcE
Q psy16880 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKL------C--------DSAVRSISFCSKQRTLISGGDDGSI 72 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~------~--------~~~v~~~~~~~~~~~~~~~~~~~~i 72 (84)
.+.+| .+.|.++.|+-++++|++|+.|..+.+|.+.... + ++.|.+++|....+.+.+|..++++
T Consensus 51 D~~~H-~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~V 129 (609)
T KOG4227|consen 51 DVREH-TGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTV 129 (609)
T ss_pred hhhhh-ccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCccee
Confidence 34567 8999999999999999999999999999885331 1 5789999999888899999999999
Q ss_pred EEEeCCCCeec
Q psy16880 73 CMWNLNSKLCD 83 (84)
Q Consensus 73 ~~~~~~~~~~~ 83 (84)
..-|+.+++.+
T Consensus 130 I~HDiEt~qsi 140 (609)
T KOG4227|consen 130 IKHDIETKQSI 140 (609)
T ss_pred Eeeecccceee
Confidence 99999887754
No 192
>KOG1445|consensus
Probab=98.78 E-value=6.2e-09 Score=61.88 Aligned_cols=69 Identities=22% Similarity=0.424 Sum_probs=58.0
Q ss_pred CcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC--------------CCCEEEEEEccC-CCEEEEecCCCcEEEEe
Q psy16880 13 NSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC--------------DSAVRSISFCSK-QRTLISGGDDGSICMWN 76 (84)
Q Consensus 13 ~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~--------------~~~v~~~~~~~~-~~~~~~~~~~~~i~~~~ 76 (84)
...|..+.|.| +...|+.++.|+.+.+|.+..... ...|+.+.|+|- ...+++++.|.+|.+||
T Consensus 627 gt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWD 706 (1012)
T KOG1445|consen 627 GTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWD 706 (1012)
T ss_pred CceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeee
Confidence 45689999999 788999999999999999875533 457999999984 45778899999999999
Q ss_pred CCCCe
Q psy16880 77 LNSKL 81 (84)
Q Consensus 77 ~~~~~ 81 (84)
+++++
T Consensus 707 l~~~~ 711 (1012)
T KOG1445|consen 707 LANAK 711 (1012)
T ss_pred hhhhh
Confidence 98764
No 193
>KOG1523|consensus
Probab=98.78 E-value=9.3e-08 Score=52.73 Aligned_cols=74 Identities=15% Similarity=0.310 Sum_probs=64.2
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
+.+++..| ...|..++|.|....+.+++.|..-.+|....... +....++.|+|.+..+++++....|.
T Consensus 47 ~~htls~H-d~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~is 125 (361)
T KOG1523|consen 47 PAHTLSEH-DKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLIS 125 (361)
T ss_pred eceehhhh-CcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEE
Confidence 56677788 89999999999999999999999999999854433 67889999999999999999999999
Q ss_pred EEeCC
Q psy16880 74 MWNLN 78 (84)
Q Consensus 74 ~~~~~ 78 (84)
+|-++
T Consensus 126 Vcy~E 130 (361)
T KOG1523|consen 126 VCYYE 130 (361)
T ss_pred EEEEe
Confidence 88654
No 194
>KOG4378|consensus
Probab=98.78 E-value=6.1e-08 Score=56.29 Aligned_cols=72 Identities=19% Similarity=0.393 Sum_probs=62.1
Q ss_pred ccCCCcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 9 VHSNNSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 9 ~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
+.| ..+...++|+|. ..+|++.+.|..+.+||+..... ..+.+.++|.++|.+++.|...|.+..||++..+
T Consensus 205 ~~H-sAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k 283 (673)
T KOG4378|consen 205 EAH-SAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTK 283 (673)
T ss_pred hhc-cCCcCcceecCCccceEEEecccceEEEeecccccccceeeecCCcceeeecCCceEEEeecCCceEEEEecccCC
Confidence 345 788889999995 46788999999999999986555 6788999999999999999999999999998655
No 195
>KOG4328|consensus
Probab=98.76 E-value=1.3e-07 Score=54.20 Aligned_cols=73 Identities=16% Similarity=0.398 Sum_probs=58.6
Q ss_pred EeccCCCcCEEEEEEccCC--CEEEEeCCCCcEEEEeCCCCCC-----------CCCEEEEEEccC-CCEEEEecCCCcE
Q psy16880 7 TFVHSNNSAVRSISFCSKQ--HTLISGGDDGSICMWNLNSKLC-----------DSAVRSISFCSK-QRTLISGGDDGSI 72 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~--~~l~~~~~~~~~~~~d~~~~~~-----------~~~v~~~~~~~~-~~~~~~~~~~~~i 72 (84)
.++.+ ..+|++++|+|.. .++++|...|.|-+||+..... ..+|.++.|+|. -..+++.+.||+|
T Consensus 181 v~kv~-~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGti 259 (498)
T KOG4328|consen 181 VAKVT-DRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTI 259 (498)
T ss_pred eeEec-ccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCcee
Confidence 34445 7899999999954 5788899999999999963322 567999999984 4678899999999
Q ss_pred EEEeCCCC
Q psy16880 73 CMWNLNSK 80 (84)
Q Consensus 73 ~~~~~~~~ 80 (84)
++-|++..
T Consensus 260 R~~D~~~~ 267 (498)
T KOG4328|consen 260 RLQDFEGN 267 (498)
T ss_pred eeeeecch
Confidence 99888653
No 196
>KOG1587|consensus
Probab=98.76 E-value=3.3e-07 Score=54.31 Aligned_cols=67 Identities=25% Similarity=0.594 Sum_probs=55.2
Q ss_pred CcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC-------------CCCEEEEEEccCCC--EEEEecCCCcEEEEe
Q psy16880 13 NSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC-------------DSAVRSISFCSKQR--TLISGGDDGSICMWN 76 (84)
Q Consensus 13 ~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~-------------~~~v~~~~~~~~~~--~~~~~~~~~~i~~~~ 76 (84)
...|.+++|+| +...++.|..+|++.+||++.... ...+..+.|..+.. -+++++.||.|..|+
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~ 321 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWD 321 (555)
T ss_pred CCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeee
Confidence 57899999999 678899999999999999975533 56788888876544 489999999999998
Q ss_pred CCC
Q psy16880 77 LNS 79 (84)
Q Consensus 77 ~~~ 79 (84)
++.
T Consensus 322 ~~~ 324 (555)
T KOG1587|consen 322 TDM 324 (555)
T ss_pred ccc
Confidence 764
No 197
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.76 E-value=1e-07 Score=35.96 Aligned_cols=39 Identities=31% Similarity=0.641 Sum_probs=32.9
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEe
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWN 41 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d 41 (84)
++++..+..+ ...|.+++|.+.+..+++++.++.+.+|+
T Consensus 2 ~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGH-TGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEec-CCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 5667777777 88899999998888899999999998886
No 198
>KOG1034|consensus
Probab=98.76 E-value=3.3e-08 Score=54.65 Aligned_cols=37 Identities=30% Similarity=0.431 Sum_probs=33.5
Q ss_pred eccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCC
Q psy16880 8 FVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSK 45 (84)
Q Consensus 8 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~ 45 (84)
+++| .+.|.+++|++++.++++++.|.++.+|+++.+
T Consensus 177 ~egH-rdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~ 213 (385)
T KOG1034|consen 177 VEGH-RDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVK 213 (385)
T ss_pred cccc-cCcEEEEEEcCCCCeeeccCCcceEEEEecChh
Confidence 3667 899999999999999999999999999999833
No 199
>KOG1409|consensus
Probab=98.74 E-value=8.4e-08 Score=53.43 Aligned_cols=77 Identities=34% Similarity=0.650 Sum_probs=64.4
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
++.++.+| .+.+.+++|.+....|.++..+..+.+||+-.... ...|..+++.+.-+.+.+++.|+.|.+|
T Consensus 189 ~i~~~~~h-~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w 267 (404)
T KOG1409|consen 189 LITTFNGH-TGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVW 267 (404)
T ss_pred eEEEEcCc-ccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEE
Confidence 46677888 99999999999999999999999999999965433 4567777777777788999999999999
Q ss_pred eCCCCe
Q psy16880 76 NLNSKL 81 (84)
Q Consensus 76 ~~~~~~ 81 (84)
+.+...
T Consensus 268 ~mn~~r 273 (404)
T KOG1409|consen 268 NMNVKR 273 (404)
T ss_pred ecccee
Confidence 987544
No 200
>KOG1524|consensus
Probab=98.70 E-value=1.5e-07 Score=55.23 Aligned_cols=38 Identities=21% Similarity=0.403 Sum_probs=33.6
Q ss_pred ccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC
Q psy16880 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC 47 (84)
Q Consensus 9 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~ 47 (84)
+.| ++-|.+++|++....+++|+.|..+++||......
T Consensus 183 kAH-DGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~L 220 (737)
T KOG1524|consen 183 RAH-DGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANL 220 (737)
T ss_pred ecc-CcEEEEeecCccccceeecCCceeEEeecccCccc
Confidence 456 89999999999999999999999999999875544
No 201
>KOG0644|consensus
Probab=98.69 E-value=1.8e-08 Score=61.37 Aligned_cols=76 Identities=18% Similarity=0.408 Sum_probs=66.8
Q ss_pred EeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 7 TFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
.+.+| .+.|.|..|...|..+++|+.|..+++|.+.+... .+.++.++.+.+..++++++.|..|++|.+++
T Consensus 185 rLlgH-~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~ 263 (1113)
T KOG0644|consen 185 RLLGH-RNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPD 263 (1113)
T ss_pred HHHhh-hhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCC
Confidence 35677 88999999999999999999999999999877655 67889999888888899999999999999988
Q ss_pred Ceec
Q psy16880 80 KLCD 83 (84)
Q Consensus 80 ~~~~ 83 (84)
+.++
T Consensus 264 ~~pv 267 (1113)
T KOG0644|consen 264 GAPV 267 (1113)
T ss_pred CchH
Confidence 7654
No 202
>KOG1063|consensus
Probab=98.68 E-value=9.1e-08 Score=57.12 Aligned_cols=76 Identities=20% Similarity=0.308 Sum_probs=63.4
Q ss_pred ceEEEeccCCCcCEEEEEEccCCC---EEEEeCCCCcEEEEeCCCCC----C----------------------------
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQH---TLISGGDDGSICMWNLNSKL----C---------------------------- 47 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~~~~~~~~d~~~~~----~---------------------------- 47 (84)
+.+..+++| .+.|.+++|...+. ++++++.|..+++|.+.... .
T Consensus 182 ~~v~el~GH-~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~e 260 (764)
T KOG1063|consen 182 ARVAELEGH-TDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFE 260 (764)
T ss_pred eEEEEeecc-chhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehh
Confidence 356788999 99999999988544 78999999999999764332 0
Q ss_pred ------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 48 ------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 48 ------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
+..|+++.|+|.+..+++++.|.++.+|....
T Consensus 261 all~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~ 298 (764)
T KOG1063|consen 261 ALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDE 298 (764)
T ss_pred hhhcCcccceEEEEEccchhhheecccCcceEEEecCC
Confidence 66899999999998899999999999997654
No 203
>KOG2394|consensus
Probab=98.68 E-value=1.9e-07 Score=54.58 Aligned_cols=69 Identities=12% Similarity=0.339 Sum_probs=56.3
Q ss_pred CcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC-----------------------------------CCCEEEEEE
Q psy16880 13 NSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC-----------------------------------DSAVRSISF 56 (84)
Q Consensus 13 ~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~-----------------------------------~~~v~~~~~ 56 (84)
+..+.+++|.|. ...++.+-.++.+.++|...... +..|..++|
T Consensus 219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~F 298 (636)
T KOG2394|consen 219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAF 298 (636)
T ss_pred ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeE
Confidence 467899999994 46777888899999887642211 567889999
Q ss_pred ccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 57 CSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
+|++++++++++|+.++|||..+.+
T Consensus 299 S~DG~~LA~VSqDGfLRvF~fdt~e 323 (636)
T KOG2394|consen 299 SPDGKYLATVSQDGFLRIFDFDTQE 323 (636)
T ss_pred cCCCceEEEEecCceEEEeeccHHH
Confidence 9999999999999999999987654
No 204
>KOG1007|consensus
Probab=98.67 E-value=1.7e-07 Score=51.38 Aligned_cols=34 Identities=26% Similarity=0.625 Sum_probs=26.6
Q ss_pred CCCEEEEEEccCC-CEEEEecCCCcEEEEeCCCCe
Q psy16880 48 DSAVRSISFCSKQ-RTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 48 ~~~v~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~ 81 (84)
...|..+.|.|+. ..+++++.|+.+++||.+.-+
T Consensus 214 gq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk 248 (370)
T KOG1007|consen 214 GQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK 248 (370)
T ss_pred cceeeeccCCCCceEEEEEcCCCccEEEEeccCCC
Confidence 4458889999865 466788889999999987543
No 205
>KOG1587|consensus
Probab=98.65 E-value=1.6e-07 Score=55.64 Aligned_cols=75 Identities=15% Similarity=0.321 Sum_probs=59.2
Q ss_pred eEEEeccCCCcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 4 IIHTFVHSNNSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
++..++.+ ...+.+++|+|. ...|+++..+|.+.+||+..... ....+.+.|++.++.++.|...|.++
T Consensus 433 Pl~~~~~~-~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~ 511 (555)
T KOG1587|consen 433 PLLSLDSS-PDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTH 511 (555)
T ss_pred cchhhhhc-cceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEE
Confidence 33444455 667999999994 57889999999999999975543 24456777888899999999999999
Q ss_pred EEeCCC
Q psy16880 74 MWNLNS 79 (84)
Q Consensus 74 ~~~~~~ 79 (84)
+|++..
T Consensus 512 ~~~l~~ 517 (555)
T KOG1587|consen 512 ILKLSE 517 (555)
T ss_pred EEEcCc
Confidence 999853
No 206
>KOG1272|consensus
Probab=98.65 E-value=5.5e-08 Score=55.86 Aligned_cols=68 Identities=16% Similarity=0.309 Sum_probs=53.2
Q ss_pred EEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
+..+-.| .++|.++++.++|.++++.+.|..+.+||++.... +.....++++..+ ++..+....+.+|
T Consensus 286 LvKiLcH-~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~Sqkg--lLA~~~G~~v~iw 359 (545)
T KOG1272|consen 286 LVKILCH-RGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKG--LLALSYGDHVQIW 359 (545)
T ss_pred HHHHHhc-CCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCcccccccccc--ceeeecCCeeeee
Confidence 3344556 89999999999999999999999999999987655 4556677777655 4444556678888
No 207
>KOG2445|consensus
Probab=98.64 E-value=1.5e-06 Score=47.98 Aligned_cols=71 Identities=14% Similarity=0.319 Sum_probs=57.1
Q ss_pred eccCCCcCEEEEEEcc--CCCEEEEeCCCCcEEEEeCCCCCC----------------CCCEEEEEEccC--CCEEEEec
Q psy16880 8 FVHSNNSAVRSISFCS--KQHTLISGGDDGSICMWNLNSKLC----------------DSAVRSISFCSK--QRTLISGG 67 (84)
Q Consensus 8 ~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~~~~~d~~~~~~----------------~~~v~~~~~~~~--~~~~~~~~ 67 (84)
-+.| .+.|..+.|-+ -|+.+++++.|+.+.+|.-..... +..|..++|.|. |-++++++
T Consensus 55 Wrah-~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~ 133 (361)
T KOG2445|consen 55 WRAH-DGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAAS 133 (361)
T ss_pred EEec-CCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEec
Confidence 3456 78889999976 578999999999999998742221 678999999984 56788999
Q ss_pred CCCcEEEEeCCC
Q psy16880 68 DDGSICMWNLNS 79 (84)
Q Consensus 68 ~~~~i~~~~~~~ 79 (84)
.||.+++|+..+
T Consensus 134 aDG~lRIYEA~d 145 (361)
T KOG2445|consen 134 ADGILRIYEAPD 145 (361)
T ss_pred cCcEEEEEecCC
Confidence 999999997643
No 208
>KOG0322|consensus
Probab=98.63 E-value=1.6e-07 Score=50.80 Aligned_cols=75 Identities=21% Similarity=0.285 Sum_probs=61.6
Q ss_pred eccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 8 FVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 8 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
+..| ..+|.+++|.+....=++|+.+-.+.+|.++.... +-.+..+.+.|+++.++++++|+.|++|.
T Consensus 201 ~ash-~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVys 279 (323)
T KOG0322|consen 201 NASH-KQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYS 279 (323)
T ss_pred hhhc-cCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEE
Confidence 3445 78899999988666667888888899998865422 45788999999999999999999999999
Q ss_pred CCCCeec
Q psy16880 77 LNSKLCD 83 (84)
Q Consensus 77 ~~~~~~~ 83 (84)
.++..++
T Consensus 280 wrtl~pL 286 (323)
T KOG0322|consen 280 WRTLNPL 286 (323)
T ss_pred eccCCch
Confidence 9887764
No 209
>KOG4547|consensus
Probab=98.63 E-value=1.1e-06 Score=51.60 Aligned_cols=80 Identities=16% Similarity=0.196 Sum_probs=66.2
Q ss_pred CceEEEec-cCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 2 GSIIHTFV-HSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 2 g~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
|+.-+.+. +.|.+.|.++.++.+...+.+++.|..+..|+...... +..+..++++|++.++++++ +.|+
T Consensus 90 g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik 167 (541)
T KOG4547|consen 90 GEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIK 167 (541)
T ss_pred CeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--ceEE
Confidence 44455554 33389999999999999999999999999999887655 55789999999999998886 6899
Q ss_pred EEeCCCCeec
Q psy16880 74 MWNLNSKLCD 83 (84)
Q Consensus 74 ~~~~~~~~~~ 83 (84)
+||+++++.+
T Consensus 168 ~~~~~~kevv 177 (541)
T KOG4547|consen 168 VLDIETKEVV 177 (541)
T ss_pred EEEccCceEE
Confidence 9999998864
No 210
>KOG0644|consensus
Probab=98.63 E-value=2e-08 Score=61.10 Aligned_cols=73 Identities=19% Similarity=0.421 Sum_probs=63.6
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
++.++...++| .+.|..++.+.+..++++++.|..+++|.+..... .+.|++++|+|.. +.+.||++.
T Consensus 221 t~~~lAs~rGh-s~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~ 295 (1113)
T KOG0644|consen 221 TARCLASCRGH-SGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCR 295 (1113)
T ss_pred chhhhccCCCC-ccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceE
Confidence 35677788999 99999999998889999999999999999987766 7789999999865 556799999
Q ss_pred EEeCC
Q psy16880 74 MWNLN 78 (84)
Q Consensus 74 ~~~~~ 78 (84)
+||.+
T Consensus 296 ~wd~r 300 (1113)
T KOG0644|consen 296 IWDAR 300 (1113)
T ss_pred ecccc
Confidence 99976
No 211
>KOG1963|consensus
Probab=98.62 E-value=7e-07 Score=54.31 Aligned_cols=68 Identities=24% Similarity=0.368 Sum_probs=60.9
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 80 (84)
...|.+++|+++|..|++|+..+.+.+|...++.. .+.|..+.++|++.....+..|+.|++-...+.
T Consensus 251 ~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl 324 (792)
T KOG1963|consen 251 HDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDL 324 (792)
T ss_pred ccccceeEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccch
Confidence 56899999999999999999999999999987766 789999999999999999999999998766443
No 212
>KOG0307|consensus
Probab=98.62 E-value=5.3e-08 Score=60.32 Aligned_cols=77 Identities=22% Similarity=0.478 Sum_probs=65.2
Q ss_pred ceEEEeccCCCcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCC-EEEEecCCCcEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQR-TLISGGDDGSIC 73 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~-~~~~~~~~~~i~ 73 (84)
.+++++++| ...|.+|+|++. .+++++++.|+.+.+|+.+++.. .+.+..+.|+|... .++..+.+|.|-
T Consensus 244 sP~k~~~~H-~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~ 322 (1049)
T KOG0307|consen 244 SPLKILEGH-QRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKIS 322 (1049)
T ss_pred Cchhhhccc-ccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheecccee
Confidence 356778888 889999999995 48999999999999999998766 57899999999765 677888899999
Q ss_pred EEeCCCC
Q psy16880 74 MWNLNSK 80 (84)
Q Consensus 74 ~~~~~~~ 80 (84)
|+.+.+.
T Consensus 323 I~sl~~~ 329 (1049)
T KOG0307|consen 323 IYSLQGT 329 (1049)
T ss_pred eeeeecC
Confidence 9987543
No 213
>KOG1310|consensus
Probab=98.61 E-value=4.7e-07 Score=53.38 Aligned_cols=77 Identities=21% Similarity=0.436 Sum_probs=60.1
Q ss_pred ceEEEeccCCCcCEEEEEEcc--CCCEEEEeCCCCcEEEEeCCCCCC-----------------CCCEEEEEEccCC-CE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCS--KQHTLISGGDDGSICMWNLNSKLC-----------------DSAVRSISFCSKQ-RT 62 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~~~~~d~~~~~~-----------------~~~v~~~~~~~~~-~~ 62 (84)
++++.+...|...|++++|.| +.+.+++|..|..|++||+...+. ...|-.++-.|++ ..
T Consensus 83 KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~Pht 162 (758)
T KOG1310|consen 83 KLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHT 162 (758)
T ss_pred ceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCce
Confidence 455555443399999999999 457889999999999999985332 3455667777777 67
Q ss_pred EEEecCCCcEEEEeCCC
Q psy16880 63 LISGGDDGSICMWNLNS 79 (84)
Q Consensus 63 ~~~~~~~~~i~~~~~~~ 79 (84)
+.+++.||+|+-+|++.
T Consensus 163 fwsasEDGtirQyDiRE 179 (758)
T KOG1310|consen 163 FWSASEDGTIRQYDIRE 179 (758)
T ss_pred EEEecCCcceeeecccC
Confidence 78999999999999875
No 214
>KOG1538|consensus
Probab=98.61 E-value=4.5e-07 Score=54.66 Aligned_cols=65 Identities=15% Similarity=0.389 Sum_probs=54.9
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (84)
...|..++|-|+|+.|+.+..+ .+.+||.+.+.. ...|++++|+.+|+.+++|+.|..+.+|...
T Consensus 12 ~hci~d~afkPDGsqL~lAAg~-rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~k 83 (1081)
T KOG1538|consen 12 EHCINDIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSK 83 (1081)
T ss_pred ccchheeEECCCCceEEEecCC-EEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccc
Confidence 4578999999999877665544 678899987766 6689999999999999999999999999753
No 215
>KOG1408|consensus
Probab=98.61 E-value=1.1e-06 Score=53.45 Aligned_cols=78 Identities=24% Similarity=0.451 Sum_probs=66.0
Q ss_pred CCceEEEeccCC--CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCc
Q psy16880 1 DGSIIHTFVHSN--NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGS 71 (84)
Q Consensus 1 ~g~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~ 71 (84)
+|+..+.|++.+ ++....+...|.+.++++...|..+.++|.-.+.. ...|+++.|.++.+.+++++.|+.
T Consensus 627 sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgC 706 (1080)
T KOG1408|consen 627 SGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGC 706 (1080)
T ss_pred ccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCce
Confidence 356666776531 46677888899999999999999999999987766 457999999999999999999999
Q ss_pred EEEEeCC
Q psy16880 72 ICMWNLN 78 (84)
Q Consensus 72 i~~~~~~ 78 (84)
|.+|.+.
T Consensus 707 IFvW~lp 713 (1080)
T KOG1408|consen 707 IFVWKLP 713 (1080)
T ss_pred EEEEECc
Confidence 9999875
No 216
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.61 E-value=1.1e-06 Score=50.72 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=52.6
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeCC---CCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEec-CCCcEEEE
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGGD---DGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGG-DDGSICMW 75 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~-~~~~i~~~ 75 (84)
+.+..+ ...+...+|+|+++.++..+. +..+.+||+.++.. .......+|+|+++.++.+. .++.+.+|
T Consensus 197 ~~lt~~-~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy 275 (429)
T PRK01742 197 FIVNRS-SQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFASSKDGVLNIY 275 (429)
T ss_pred eEeccC-CCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeECCCCCEEEEEEecCCcEEEE
Confidence 344455 667889999999998877653 34688999976543 34456789999999887654 57765555
Q ss_pred --eCCCCe
Q psy16880 76 --NLNSKL 81 (84)
Q Consensus 76 --~~~~~~ 81 (84)
|+.+++
T Consensus 276 ~~d~~~~~ 283 (429)
T PRK01742 276 VMGANGGT 283 (429)
T ss_pred EEECCCCC
Confidence 655443
No 217
>KOG1523|consensus
Probab=98.61 E-value=7.2e-07 Score=49.39 Aligned_cols=64 Identities=19% Similarity=0.316 Sum_probs=56.0
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
...+.++.|+|.+..|+.|+....+.+|-+....- ++.|.++.|+|+.-.++.|+.|+.++++.
T Consensus 100 NrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfS 174 (361)
T KOG1523|consen 100 NRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFS 174 (361)
T ss_pred ccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEE
Confidence 66789999999999999999999999987654433 67899999999999999999999999985
No 218
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.58 E-value=5.6e-06 Score=48.40 Aligned_cols=77 Identities=5% Similarity=0.144 Sum_probs=64.1
Q ss_pred EEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecC----CCcEE
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGD----DGSIC 73 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~----~~~i~ 73 (84)
+..++.. -+.|.+++.+++|+.++.++....+.+.|+.++.. .+.|..+.|+|++++++-+-- ...|+
T Consensus 394 ~kr~e~~-lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Ik 472 (668)
T COG4946 394 VKRIEKD-LGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIK 472 (668)
T ss_pred EEEeeCC-ccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEE
Confidence 4455555 78999999999999999999999999999988876 678999999999999986533 44699
Q ss_pred EEeCCCCee
Q psy16880 74 MWNLNSKLC 82 (84)
Q Consensus 74 ~~~~~~~~~ 82 (84)
++|..+++.
T Consensus 473 lydm~~~Ki 481 (668)
T COG4946 473 LYDMDGGKI 481 (668)
T ss_pred EEecCCCeE
Confidence 999888764
No 219
>KOG1963|consensus
Probab=98.58 E-value=7.5e-07 Score=54.19 Aligned_cols=69 Identities=26% Similarity=0.539 Sum_probs=59.9
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCC--CCC---------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNS--KLC---------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~--~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
...+.+.+++|.++.++++..+|.+.+|.-.. ... -..|.+++|+++|..+++|++.+.+-+|...+++
T Consensus 205 tf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~ 284 (792)
T KOG1963|consen 205 TFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK 284 (792)
T ss_pred cccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC
Confidence 66688999999999999999999999996543 111 5689999999999999999999999999988766
No 220
>KOG1408|consensus
Probab=98.58 E-value=1.2e-06 Score=53.23 Aligned_cols=71 Identities=11% Similarity=0.234 Sum_probs=63.4
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
...+..|++.|...+.++++.|..+++||+..++. ++..-.+...|.+.++++.+.|.++.++|..+++|
T Consensus 596 ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEc 675 (1080)
T KOG1408|consen 596 KTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGEC 675 (1080)
T ss_pred cceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchh
Confidence 35689999999999999999999999999987766 45666788899999999999999999999999887
Q ss_pred c
Q psy16880 83 D 83 (84)
Q Consensus 83 ~ 83 (84)
+
T Consensus 676 v 676 (1080)
T KOG1408|consen 676 V 676 (1080)
T ss_pred h
Confidence 5
No 221
>KOG2919|consensus
Probab=98.57 E-value=9.6e-07 Score=49.14 Aligned_cols=69 Identities=19% Similarity=0.416 Sum_probs=56.2
Q ss_pred CcCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecC-CCcEEEEeCCCCe
Q psy16880 13 NSAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGD-DGSICMWNLNSKL 81 (84)
Q Consensus 13 ~~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ 81 (84)
.+.|.+++++|. ...++.++....+-+|.-....+ ++.|+.++|+++|..+.+|.+ +..|..||++..+
T Consensus 207 ~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~ 284 (406)
T KOG2919|consen 207 KGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSR 284 (406)
T ss_pred cceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhcc
Confidence 567899999995 45888888888888876654444 789999999999999999887 6789999998543
No 222
>KOG0650|consensus
Probab=98.56 E-value=1.3e-07 Score=55.85 Aligned_cols=72 Identities=28% Similarity=0.409 Sum_probs=58.8
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCC------CCCC--------------CCCEEEEEEccCCCE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN------SKLC--------------DSAVRSISFCSKQRT 62 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~------~~~~--------------~~~v~~~~~~~~~~~ 62 (84)
++.++++-| ...+..++|++.-.+|++|+.|+.+.+|.-. .... .-.|....|+|...+
T Consensus 641 kPyk~lr~H-~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpW 719 (733)
T KOG0650|consen 641 KPYKTLRLH-EKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPW 719 (733)
T ss_pred chhHHhhhh-hhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCce
Confidence 455666677 8999999999999999999999999887432 1111 235778889999999
Q ss_pred EEEecCCCcEEEE
Q psy16880 63 LISGGDDGSICMW 75 (84)
Q Consensus 63 ~~~~~~~~~i~~~ 75 (84)
+.+++.|++|++|
T Consensus 720 LfsAGAd~tirlf 732 (733)
T KOG0650|consen 720 LFSAGADGTIRLF 732 (733)
T ss_pred EEecCCCceEEee
Confidence 9999999999998
No 223
>KOG4714|consensus
Probab=98.54 E-value=2.5e-07 Score=50.06 Aligned_cols=66 Identities=23% Similarity=0.519 Sum_probs=55.5
Q ss_pred cCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEcc-CCCEEEEecCCCcEEEEeCCC
Q psy16880 14 SAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCS-KQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 14 ~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~~ 79 (84)
..|.+++-+|. ...+++|+.+|.+.+||.+.... +..+.-+.|+| ++..+++++.||.+..||-.+
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 34888888994 56778999999999999987644 78899999998 567899999999999999774
No 224
>KOG2315|consensus
Probab=98.45 E-value=9.5e-06 Score=47.80 Aligned_cols=77 Identities=12% Similarity=0.343 Sum_probs=56.7
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEe---CCCCcEEEEeCCCCCC-----CCCEEEEEEccCCCEEEEecC-----
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISG---GDDGSICMWNLNSKLC-----DSAVRSISFCSKQRTLISGGD----- 68 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~~~~~~~~d~~~~~~-----~~~v~~~~~~~~~~~~~~~~~----- 68 (84)
|.++..+. +++=.++-|+|.|+.++.+ +..|.+.+||....+. -..-+-+.|+|+|.+++++..
T Consensus 303 ~~~v~df~---egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~tt~~eW~PdGe~flTATTaPRlr 379 (566)
T KOG2315|consen 303 GKPVFDFP---EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAANTTVFEWSPDGEYFLTATTAPRLR 379 (566)
T ss_pred CCEeEeCC---CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCCceEEEEcCCCcEEEEEeccccEE
Confidence 34444442 4566788999999987655 5577999999987555 334566889999999988763
Q ss_pred -CCcEEEEeCCCCe
Q psy16880 69 -DGSICMWNLNSKL 81 (84)
Q Consensus 69 -~~~i~~~~~~~~~ 81 (84)
|+.++||++....
T Consensus 380 vdNg~KiwhytG~~ 393 (566)
T KOG2315|consen 380 VDNGIKIWHYTGSL 393 (566)
T ss_pred ecCCeEEEEecCce
Confidence 6789999876543
No 225
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.45 E-value=8e-06 Score=47.36 Aligned_cols=75 Identities=15% Similarity=0.195 Sum_probs=53.6
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeC---CCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEE-EecCCCc--EE
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGG---DDGSICMWNLNSKLC------DSAVRSISFCSKQRTLI-SGGDDGS--IC 73 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~-~~~~~~~--i~ 73 (84)
+.+..+ ...+...+|+|+++.++..+ .+..+.+||+.++.. ...+....|+|+++.++ +.+.++. |.
T Consensus 195 ~~lt~~-~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy 273 (435)
T PRK05137 195 RYLTDG-SSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIY 273 (435)
T ss_pred EEEecC-CCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEEEecCCCceEE
Confidence 444455 67889999999999877654 346889999976544 44667889999998775 4444544 77
Q ss_pred EEeCCCCe
Q psy16880 74 MWNLNSKL 81 (84)
Q Consensus 74 ~~~~~~~~ 81 (84)
+||+.+++
T Consensus 274 ~~d~~~~~ 281 (435)
T PRK05137 274 TMDLRSGT 281 (435)
T ss_pred EEECCCCc
Confidence 77877654
No 226
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.38 E-value=3e-05 Score=43.11 Aligned_cols=77 Identities=30% Similarity=0.550 Sum_probs=58.4
Q ss_pred ceEEEeccCCCcCEEEEEEccCCC-EEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQH-TLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
..+..+.+| ...|.+++|.|++. .+++++.++.+.+||...... .... ...|+|++..+++++.++.++
T Consensus 189 ~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~ 266 (466)
T COG2319 189 KPLSTLAGH-TDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIR 266 (466)
T ss_pred ceEEeeccC-CCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEE
Confidence 456677777 88999999999887 555559999999998763322 1222 227899888888999999999
Q ss_pred EEeCCCCe
Q psy16880 74 MWNLNSKL 81 (84)
Q Consensus 74 ~~~~~~~~ 81 (84)
+|+.....
T Consensus 267 ~~~~~~~~ 274 (466)
T COG2319 267 LWDLRSSS 274 (466)
T ss_pred EeeecCCC
Confidence 99987543
No 227
>KOG2315|consensus
Probab=98.32 E-value=1.8e-05 Score=46.71 Aligned_cols=71 Identities=13% Similarity=0.291 Sum_probs=57.7
Q ss_pred CcCEEEEEEccCCCEEE--EeCCCCcEEEEeCCCCCC----CCCEEEEEEccCCCEEEEecC---CCcEEEEeCCCCeec
Q psy16880 13 NSAVRSISFCSKQHTLI--SGGDDGSICMWNLNSKLC----DSAVRSISFCSKQRTLISGGD---DGSICMWNLNSKLCD 83 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~--~~~~~~~~~~~d~~~~~~----~~~v~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~ 83 (84)
.++|.++.|+|+++-|+ -|-....+.+||++-... ++.-.++-|+|.|++++.++. .|.|-+||..+.+++
T Consensus 270 ~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~v~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i 349 (566)
T KOG2315|consen 270 EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKPVFDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLI 349 (566)
T ss_pred CCCceEEEECCCCCEEEEEEecccceEEEEcCCCCEeEeCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhc
Confidence 68999999999997554 456666889999886555 677788999999999988775 467999999887764
No 228
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.32 E-value=3.3e-05 Score=44.90 Aligned_cols=70 Identities=11% Similarity=0.124 Sum_probs=50.2
Q ss_pred CcCEEEEEEccCCCEEEEeC---CCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEe-cCCC--cEEEEeCCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGG---DDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISG-GDDG--SICMWNLNSK 80 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~---~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~-~~~~--~i~~~~~~~~ 80 (84)
...+...+|+|+|+.++..+ ....+.+||+..+.. ...+....|+|+++.++.. +.++ .|.+||+.++
T Consensus 198 ~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg 277 (429)
T PRK03629 198 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG 277 (429)
T ss_pred CCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCC
Confidence 45788999999999887542 345788889876543 3455678999999988754 3344 4888898766
Q ss_pred ee
Q psy16880 81 LC 82 (84)
Q Consensus 81 ~~ 82 (84)
+.
T Consensus 278 ~~ 279 (429)
T PRK03629 278 QI 279 (429)
T ss_pred CE
Confidence 43
No 229
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.31 E-value=1.4e-05 Score=46.37 Aligned_cols=74 Identities=20% Similarity=0.220 Sum_probs=51.7
Q ss_pred EeccCCCcCEEEEEEccCCCEEEEeCC---CCcEEEEeCCCCCC------CCCEEEEEEccCCCEEE-EecCCC--cEEE
Q psy16880 7 TFVHSNNSAVRSISFCSKQHTLISGGD---DGSICMWNLNSKLC------DSAVRSISFCSKQRTLI-SGGDDG--SICM 74 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~-~~~~~~--~i~~ 74 (84)
.+..+ ...+...+|+|+++.++..+. ...+.+||+..+.. ........|+|+++.++ +.+.++ .|.+
T Consensus 198 ~lt~~-~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~ 276 (433)
T PRK04922 198 TILRS-AEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYV 276 (433)
T ss_pred EeecC-CCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCCCCceEEE
Confidence 34344 567788999999998876653 34688899876544 33455789999998775 334444 5888
Q ss_pred EeCCCCe
Q psy16880 75 WNLNSKL 81 (84)
Q Consensus 75 ~~~~~~~ 81 (84)
||+.+++
T Consensus 277 ~d~~~g~ 283 (433)
T PRK04922 277 MDLGSRQ 283 (433)
T ss_pred EECCCCC
Confidence 9987665
No 230
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.29 E-value=1.6e-05 Score=46.10 Aligned_cols=69 Identities=13% Similarity=0.145 Sum_probs=48.9
Q ss_pred EeccCCCcCEEEEEEccCCCEEEEeCC---CCcEEEEeCCCCCC------CCCEEEEEEccCCCEEE-EecCCCcEEEEe
Q psy16880 7 TFVHSNNSAVRSISFCSKQHTLISGGD---DGSICMWNLNSKLC------DSAVRSISFCSKQRTLI-SGGDDGSICMWN 76 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~-~~~~~~~i~~~~ 76 (84)
.+..+ ...+...+|+|+++.++..+. ...+.+||+..+.. ...+....|+|+++.++ +.+.++...+|.
T Consensus 190 ~l~~~-~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~ 268 (427)
T PRK02889 190 SALSS-PEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYT 268 (427)
T ss_pred EeccC-CCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCCceEEE
Confidence 33344 567889999999998876543 24588899976644 44567889999998776 456677666664
No 231
>KOG3881|consensus
Probab=98.28 E-value=1e-05 Score=45.90 Aligned_cols=68 Identities=9% Similarity=0.191 Sum_probs=59.6
Q ss_pred EEEEEEccC--CCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 16 VRSISFCSK--QHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 16 v~~~~~~~~--~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
+..+.|.+. ...|+++..-+.+++||.+.+.. +..++++...|.++.++++...+.+..||.+.++.+
T Consensus 205 ~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~ 282 (412)
T KOG3881|consen 205 ITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLL 282 (412)
T ss_pred eccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceee
Confidence 466778876 78999999999999999986655 788999999999999999999999999999988754
No 232
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.27 E-value=3.9e-05 Score=42.90 Aligned_cols=63 Identities=17% Similarity=0.280 Sum_probs=48.6
Q ss_pred EEEEEEccCCCEEE-EeCCCCcEEEEeCCCCCC-------------CCCEEEEEEccCCCEEEEecC-CCcEEEEeCC
Q psy16880 16 VRSISFCSKQHTLI-SGGDDGSICMWNLNSKLC-------------DSAVRSISFCSKQRTLISGGD-DGSICMWNLN 78 (84)
Q Consensus 16 v~~~~~~~~~~~l~-~~~~~~~~~~~d~~~~~~-------------~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 78 (84)
...++++|+++.++ +...++.+.+||+..... .....++.|+|+++.++++.. ++.|.+|++.
T Consensus 128 ~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~ 205 (330)
T PRK11028 128 CHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLK 205 (330)
T ss_pred ccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEe
Confidence 45678999998775 445668999999975321 334578999999998887765 8999999986
No 233
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.25 E-value=5.4e-05 Score=43.85 Aligned_cols=69 Identities=14% Similarity=0.148 Sum_probs=48.4
Q ss_pred CcCEEEEEEccCCCEEEEeCCC---CcEEEEeCCCCCC------CCCEEEEEEccCCCEEEE-ecCCC--cEEEEeCCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDD---GSICMWNLNSKLC------DSAVRSISFCSKQRTLIS-GGDDG--SICMWNLNSK 80 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~---~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~-~~~~~--~i~~~~~~~~ 80 (84)
...+...+|+|+++.++..+.. ..+.+||+.++.. ...+....|+|+++.++. ...++ .|.++|+.++
T Consensus 198 ~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~ 277 (430)
T PRK00178 198 REPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASR 277 (430)
T ss_pred CCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCC
Confidence 5677888999999987655422 3677888876543 344557899999987764 43444 5788888765
Q ss_pred e
Q psy16880 81 L 81 (84)
Q Consensus 81 ~ 81 (84)
+
T Consensus 278 ~ 278 (430)
T PRK00178 278 Q 278 (430)
T ss_pred C
Confidence 4
No 234
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=98.23 E-value=1.2e-05 Score=32.83 Aligned_cols=28 Identities=25% Similarity=0.615 Sum_probs=13.8
Q ss_pred CEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 50 AVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 50 ~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
.|..++|+|...+++.+..+|.|.++++
T Consensus 13 ~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 13 RVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 3444555555444555544555555444
No 235
>KOG1517|consensus
Probab=98.20 E-value=3.7e-05 Score=48.83 Aligned_cols=66 Identities=21% Similarity=0.297 Sum_probs=52.4
Q ss_pred cCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC------------CCCEEEEEEccCCC-EEEEecCCCcEEEEeCCC
Q psy16880 14 SAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC------------DSAVRSISFCSKQR-TLISGGDDGSICMWNLNS 79 (84)
Q Consensus 14 ~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~------------~~~v~~~~~~~~~~-~~~~~~~~~~i~~~~~~~ 79 (84)
..|++++-+. .|..+++|..||.+++||.+-... ...|.++.+.++|- .+++++.+|.|.+||++.
T Consensus 1209 t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~ 1288 (1387)
T KOG1517|consen 1209 TLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRM 1288 (1387)
T ss_pred ccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEeccc
Confidence 4466665554 568999999999999999986544 22388888887664 489999999999999986
No 236
>KOG1517|consensus
Probab=98.19 E-value=3.3e-05 Score=49.04 Aligned_cols=75 Identities=20% Similarity=0.364 Sum_probs=59.3
Q ss_pred eEEEeccCCCcC--EEEEEEccCCC-EEEEeCCCCcEEEEeCCCCCC------------CCCEEEEEEccCCCEEEEecC
Q psy16880 4 IIHTFVHSNNSA--VRSISFCSKQH-TLISGGDDGSICMWNLNSKLC------------DSAVRSISFCSKQRTLISGGD 68 (84)
Q Consensus 4 ~~~~~~~~~~~~--v~~~~~~~~~~-~l~~~~~~~~~~~~d~~~~~~------------~~~v~~~~~~~~~~~~~~~~~ 68 (84)
++...+.| ... |.-+.+.+.|- .+++|+.+|.+.+||++.... .+..+++..+++...+++|+.
T Consensus 1246 ~v~~~R~h-~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~ 1324 (1387)
T KOG1517|consen 1246 LVCVYREH-NDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA 1324 (1387)
T ss_pred cceeeccc-CCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc
Confidence 34455666 655 88888888664 599999999999999987422 224899999999999999987
Q ss_pred CCcEEEEeCCCC
Q psy16880 69 DGSICMWNLNSK 80 (84)
Q Consensus 69 ~~~i~~~~~~~~ 80 (84)
..|+||++...
T Consensus 1325 -q~ikIy~~~G~ 1335 (1387)
T KOG1517|consen 1325 -QLIKIYSLSGE 1335 (1387)
T ss_pred -ceEEEEecChh
Confidence 89999998654
No 237
>KOG2139|consensus
Probab=98.18 E-value=4.2e-05 Score=43.46 Aligned_cols=70 Identities=19% Similarity=0.374 Sum_probs=51.6
Q ss_pred CcCEEEEEEccCC-CEEEEeCCCCcEEEEeCCCCCC--------------------CCCEEEEEEccCCCEEEEecC-CC
Q psy16880 13 NSAVRSISFCSKQ-HTLISGGDDGSICMWNLNSKLC--------------------DSAVRSISFCSKQRTLISGGD-DG 70 (84)
Q Consensus 13 ~~~v~~~~~~~~~-~~l~~~~~~~~~~~~d~~~~~~--------------------~~~v~~~~~~~~~~~~~~~~~-~~ 70 (84)
+..|.+++|-|.+ +.|+.|+.. -+.+|....... ...|+.++|.+++..+++++. +.
T Consensus 140 QrnvtclawRPlsaselavgCr~-gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gss 218 (445)
T KOG2139|consen 140 QRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSS 218 (445)
T ss_pred hcceeEEEeccCCcceeeeeecc-eeEEEEcCcccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcc
Confidence 3568999999955 455555544 577897643211 457999999999999988876 56
Q ss_pred cEEEEeCCCCeec
Q psy16880 71 SICMWNLNSKLCD 83 (84)
Q Consensus 71 ~i~~~~~~~~~~~ 83 (84)
.|.+||+.++..+
T Consensus 219 si~iWdpdtg~~~ 231 (445)
T KOG2139|consen 219 SIMIWDPDTGQKI 231 (445)
T ss_pred eEEEEcCCCCCcc
Confidence 7999999877643
No 238
>KOG4532|consensus
Probab=98.18 E-value=4.9e-05 Score=41.74 Aligned_cols=66 Identities=12% Similarity=0.141 Sum_probs=55.5
Q ss_pred EEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
+..++++++++++++.+....+..|.+..... ...-.+.+|+.+...++++.+|+.+.+||+++..
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~ 236 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMA 236 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccc
Confidence 67889999999999999999999998875543 3445678888888899999999999999998654
No 239
>KOG1064|consensus
Probab=98.18 E-value=4.2e-06 Score=55.15 Aligned_cols=70 Identities=19% Similarity=0.531 Sum_probs=54.6
Q ss_pred ccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCCCCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 9 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
..| .+.+.++++-|..++|++|+.+|.+++||++........-. +. ....+++++..|.|+||++..-..
T Consensus 2333 ~~H-~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~--~~-~~~~f~~~ss~g~ikIw~~s~~~l 2402 (2439)
T KOG1064|consen 2333 TCH-DGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA--LD-TREYFVTGSSEGNIKIWRLSEFGL 2402 (2439)
T ss_pred eec-CCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh--hh-hhheeeccCcccceEEEEccccch
Confidence 345 88899999999999999999999999999987554111111 33 456899999999999999876543
No 240
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.16 E-value=0.00019 Score=40.15 Aligned_cols=65 Identities=17% Similarity=0.165 Sum_probs=48.4
Q ss_pred CEEEEEEccCCCEEEEeC-CCCcEEEEeCCCCCC----------CCCEEEEEEccCCCEEEEec-CCCcEEEEeCCC
Q psy16880 15 AVRSISFCSKQHTLISGG-DDGSICMWNLNSKLC----------DSAVRSISFCSKQRTLISGG-DDGSICMWNLNS 79 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~~~~-~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~~~~~~~~-~~~~i~~~~~~~ 79 (84)
....+.++|+++.+++++ .++.+.+|++..... ......++++|+++.+++++ .++.|.+||+.+
T Consensus 81 ~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~ 157 (330)
T PRK11028 81 SPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSD 157 (330)
T ss_pred CceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECC
Confidence 446789999999877665 477899999863211 23467788999998886554 568999999875
No 241
>KOG2111|consensus
Probab=98.14 E-value=7.4e-05 Score=41.67 Aligned_cols=58 Identities=16% Similarity=0.209 Sum_probs=45.4
Q ss_pred CEEEE-eCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCc-EEEEeCCCCeec
Q psy16880 26 HTLIS-GGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGS-ICMWNLNSKLCD 83 (84)
Q Consensus 26 ~~l~~-~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~ 83 (84)
..|+. |...|.+.+-|+..... .+.|.+++..-+|.++++++..|+ |++||..++..+
T Consensus 149 ~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l 217 (346)
T KOG2111|consen 149 SLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLL 217 (346)
T ss_pred eEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEe
Confidence 34443 45567888888753322 778999999999999999999987 889999988765
No 242
>KOG1064|consensus
Probab=98.13 E-value=9.7e-06 Score=53.61 Aligned_cols=36 Identities=25% Similarity=0.696 Sum_probs=31.6
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
.+.++++++.|+...+++|+.+|.+++||++..+..
T Consensus 2336 ~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~ 2371 (2439)
T KOG1064|consen 2336 DGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLR 2371 (2439)
T ss_pred CCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHH
Confidence 567889999999999999999999999999876643
No 243
>KOG2695|consensus
Probab=98.10 E-value=2.6e-06 Score=47.83 Aligned_cols=70 Identities=24% Similarity=0.464 Sum_probs=56.4
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----------CCCEEEEEEcc-CCCEEEEecCCCcEEEEeCCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----------DSAVRSISFCS-KQRTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----------~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~ 80 (84)
.+.|+++.|...+.++..|..++.+...|++.... .+.|++++.-. .+..+.+.+.+|+|++||.+.-
T Consensus 252 ksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~ 331 (425)
T KOG2695|consen 252 KSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRAT 331 (425)
T ss_pred chhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhh
Confidence 57788889988899999999999999999986643 55666666554 5567788888999999999865
Q ss_pred ee
Q psy16880 81 LC 82 (84)
Q Consensus 81 ~~ 82 (84)
++
T Consensus 332 K~ 333 (425)
T KOG2695|consen 332 KC 333 (425)
T ss_pred hc
Confidence 54
No 244
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.09 E-value=0.0001 Score=42.21 Aligned_cols=79 Identities=10% Similarity=0.121 Sum_probs=52.9
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEe----CCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCC
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISG----GDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDG 70 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~ 70 (84)
+.+++++.. .+. ..++.+|+++.+... .....+.++|..+... ...+.++.|+++|+.+..+..++
T Consensus 260 kvv~~I~~~-G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~ 337 (369)
T PF02239_consen 260 KVVKTIPTQ-GGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDG 337 (369)
T ss_dssp SEEEEEE-S-SSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--
T ss_pred eEEEEEECC-CCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecC
Confidence 466777765 555 677889999988877 5567999999988755 34599999999999776655543
Q ss_pred --cEEEEeCCCCeec
Q psy16880 71 --SICMWNLNSKLCD 83 (84)
Q Consensus 71 --~i~~~~~~~~~~~ 83 (84)
.|.+||..+.+.+
T Consensus 338 ~~~i~v~D~~Tl~~~ 352 (369)
T PF02239_consen 338 NGAIVVYDAKTLKEK 352 (369)
T ss_dssp TTEEEEEETTTTEEE
T ss_pred CCEEEEEECCCcEEE
Confidence 6999999988765
No 245
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.08 E-value=0.00012 Score=42.08 Aligned_cols=69 Identities=16% Similarity=0.170 Sum_probs=49.0
Q ss_pred CcCEEEEEEccCCCEEEEeCCC---CcEEEEeCCCCCC------CCCEEEEEEccCCCEEEE-ecCCC--cEEEEeCCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDD---GSICMWNLNSKLC------DSAVRSISFCSKQRTLIS-GGDDG--SICMWNLNSK 80 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~---~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~-~~~~~--~i~~~~~~~~ 80 (84)
...+...+|+|+++.++..... ..+.+||+.++.. ...+....|+|+++.++. ...++ .|.+|++.++
T Consensus 189 ~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~ 268 (417)
T TIGR02800 189 REPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGK 268 (417)
T ss_pred CCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCC
Confidence 4567888999999988765432 4788999876643 345667899999987764 34333 5888888765
Q ss_pred e
Q psy16880 81 L 81 (84)
Q Consensus 81 ~ 81 (84)
+
T Consensus 269 ~ 269 (417)
T TIGR02800 269 Q 269 (417)
T ss_pred C
Confidence 4
No 246
>KOG4497|consensus
Probab=98.08 E-value=3.4e-05 Score=43.45 Aligned_cols=51 Identities=22% Similarity=0.384 Sum_probs=34.9
Q ss_pred CcCEEEEEEccCCCE-EEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEE
Q psy16880 13 NSAVRSISFCSKQHT-LISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTL 63 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~-l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~ 63 (84)
...+..++|+|+|+. |.+...+-.+.+|.+.+... ...+-.++|+|+++..
T Consensus 91 ~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ 148 (447)
T KOG4497|consen 91 QAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFC 148 (447)
T ss_pred CCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCcee
Confidence 567889999999964 55666777999999987755 2333444555554433
No 247
>KOG4532|consensus
Probab=98.02 E-value=0.00044 Score=38.18 Aligned_cols=68 Identities=12% Similarity=0.094 Sum_probs=51.0
Q ss_pred cCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------------CCCEEEEEEccCCC--EEEEecCCCcEEEEeCCC
Q psy16880 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------------DSAVRSISFCSKQR--TLISGGDDGSICMWNLNS 79 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------------~~~v~~~~~~~~~~--~~~~~~~~~~i~~~~~~~ 79 (84)
+.-++.+|+.....++.+..|+.+.+||++.... .+.++.+.|++.+. ++.-.-.-+.+++-|+++
T Consensus 204 D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~ 283 (344)
T KOG4532|consen 204 DHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRN 283 (344)
T ss_pred CCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEccc
Confidence 3446888999999999999999999999986544 66789999998653 233333345678888776
Q ss_pred Ce
Q psy16880 80 KL 81 (84)
Q Consensus 80 ~~ 81 (84)
.+
T Consensus 284 ~~ 285 (344)
T KOG4532|consen 284 YV 285 (344)
T ss_pred Cc
Confidence 54
No 248
>KOG2695|consensus
Probab=98.01 E-value=1.6e-05 Score=44.86 Aligned_cols=71 Identities=24% Similarity=0.445 Sum_probs=53.5
Q ss_pred CcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEc-----cCCCEEEEecCCCcEEEEeCCC
Q psy16880 13 NSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFC-----SKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 13 ~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
.+.|.++..-. +++.|.+.+.++.+++||.+..+. +++|...++. +....+++++.|...++|.++.
T Consensus 298 ~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ 377 (425)
T KOG2695|consen 298 DSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDS 377 (425)
T ss_pred CcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEeccc
Confidence 66677776666 778899999999999999985544 5555554443 3456788899999999999987
Q ss_pred Ceec
Q psy16880 80 KLCD 83 (84)
Q Consensus 80 ~~~~ 83 (84)
+..+
T Consensus 378 ghLl 381 (425)
T KOG2695|consen 378 GHLL 381 (425)
T ss_pred Ccee
Confidence 6543
No 249
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.99 E-value=3.5e-05 Score=28.51 Aligned_cols=29 Identities=34% Similarity=0.716 Sum_probs=25.8
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
...+.++.|.+.+..+++++.|+.+.+|+
T Consensus 12 ~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 12 TGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred CCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 45789999999889999999999999996
No 250
>KOG1240|consensus
Probab=97.98 E-value=0.00043 Score=44.80 Aligned_cols=70 Identities=20% Similarity=0.379 Sum_probs=57.4
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------------------------------------------
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------------------------------------------- 47 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------------------------------------------- 47 (84)
.+.+.++...+.+..++.++.||.+.+.+++....
T Consensus 1098 ~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~ 1177 (1431)
T KOG1240|consen 1098 GSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVS 1177 (1431)
T ss_pred CCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEE
Confidence 56788888888888888889999998888765211
Q ss_pred -----------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 48 -----------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 48 -----------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
.+.|+.++.+|.+.+++.|...|.+.+||++=+.+
T Consensus 1178 ~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~ 1229 (1431)
T KOG1240|consen 1178 WDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVP 1229 (1431)
T ss_pred ecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCce
Confidence 56789999999999999999999999999875443
No 251
>KOG1409|consensus
Probab=97.97 E-value=1.7e-05 Score=44.67 Aligned_cols=41 Identities=34% Similarity=0.634 Sum_probs=32.4
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC 47 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~ 47 (84)
..+++| .+.|..+.+-+....+.+++.|+.+.+|+++....
T Consensus 234 ~el~gh-~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~ 274 (404)
T KOG1409|consen 234 YELQGH-NDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRV 274 (404)
T ss_pred eeeccc-hhhhhhhhhhhhheeeeeccCCCeEEEEeccceee
Confidence 345666 77778887777788999999999999999975533
No 252
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.97 E-value=0.00058 Score=37.65 Aligned_cols=70 Identities=19% Similarity=0.345 Sum_probs=51.6
Q ss_pred CcCEEEEEEccCCCEEEEeCCC-C----------cEEEEeCCCCCC----------------------------------
Q psy16880 13 NSAVRSISFCSKQHTLISGGDD-G----------SICMWNLNSKLC---------------------------------- 47 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~-~----------~~~~~d~~~~~~---------------------------------- 47 (84)
...|.++.|+|.-++|+.|+.. . -+..|.+....+
T Consensus 147 p~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~ 226 (282)
T PF15492_consen 147 PHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQG 226 (282)
T ss_pred CCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccc
Confidence 5678899999987877666431 1 234555443322
Q ss_pred --CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 48 --DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 48 --~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
+..|..++.+|++..+++...+|.|.+|++.+-+.
T Consensus 227 ~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~ 263 (282)
T PF15492_consen 227 QEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRL 263 (282)
T ss_pred cCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchh
Confidence 45688999999999999999999999999886554
No 253
>KOG1334|consensus
Probab=97.97 E-value=1.5e-05 Score=46.57 Aligned_cols=71 Identities=20% Similarity=0.405 Sum_probs=56.4
Q ss_pred eccCCCc--CEEEEE-EccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 8 FVHSNNS--AVRSIS-FCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 8 ~~~~~~~--~v~~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
|++| .+ .|..+- |.|...++++|+..|.|.+|+-.+... +.-|.|+.=+|..+.+++++-|.-|+||-+
T Consensus 387 YKGH-rN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP 465 (559)
T KOG1334|consen 387 YKGH-RNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTP 465 (559)
T ss_pred hccc-ccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecC
Confidence 5666 43 344443 456789999999999999999887766 457888888899999999999999999987
Q ss_pred CC
Q psy16880 78 NS 79 (84)
Q Consensus 78 ~~ 79 (84)
.+
T Consensus 466 ~~ 467 (559)
T KOG1334|consen 466 LT 467 (559)
T ss_pred Cc
Confidence 43
No 254
>KOG4190|consensus
Probab=97.96 E-value=1.4e-05 Score=47.78 Aligned_cols=72 Identities=21% Similarity=0.485 Sum_probs=54.8
Q ss_pred EEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------------CCCEEEEEEccCCCEEEEecCCC
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------------DSAVRSISFCSKQRTLISGGDDG 70 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------------~~~v~~~~~~~~~~~~~~~~~~~ 70 (84)
+..+.+| +..|..++--.+...+++++.|..+++|.++...- ...|..+.|-.+-+.++++ |+
T Consensus 728 L~nf~GH-~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~ 804 (1034)
T KOG4190|consen 728 LCNFTGH-QEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DG 804 (1034)
T ss_pred eecccCc-HHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cC
Confidence 4466777 88888887777788999999999999999975422 5567777777666666554 78
Q ss_pred cEEEEeCCC
Q psy16880 71 SICMWNLNS 79 (84)
Q Consensus 71 ~i~~~~~~~ 79 (84)
-|++||+=-
T Consensus 805 giHlWDPFi 813 (1034)
T KOG4190|consen 805 GIHLWDPFI 813 (1034)
T ss_pred cceeecccc
Confidence 899999743
No 255
>KOG4640|consensus
Probab=97.96 E-value=0.00011 Score=44.21 Aligned_cols=69 Identities=17% Similarity=0.276 Sum_probs=53.5
Q ss_pred cCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCE-EEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAV-RSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
-.+.-+.|+|.-..++.+..+|.+.+...+-.+. ...+ ++.+|.|+|+.++.|-.||+|.+-|..++..
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~ 96 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLNWQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGR 96 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEeccceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCc
Confidence 3567889999999999999888775554442222 2233 5999999999999999999999999887654
No 256
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.95 E-value=9e-05 Score=30.21 Aligned_cols=31 Identities=29% Similarity=0.618 Sum_probs=28.5
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLN 43 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~ 43 (84)
...|.+++|+|...+++.+..+|.+.++.++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 4679999999999999999999999999885
No 257
>KOG0974|consensus
Probab=97.95 E-value=5.6e-05 Score=47.34 Aligned_cols=68 Identities=21% Similarity=0.463 Sum_probs=58.5
Q ss_pred cCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy16880 10 HSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 10 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 80 (84)
+| ...|+.+.+.|. .+++++.|..+++|+.+.... ...+..+...+.....++++.|+.+++|++...
T Consensus 216 gH-saRvw~~~~~~n--~i~t~gedctcrvW~~~~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 216 GH-SARVWACCFLPN--RIITVGEDCTCRVWGVNGTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred cc-cceeEEEEeccc--eeEEeccceEEEEEecccceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhcc
Confidence 46 889999999987 999999999999997664433 678899999999999999999999999987653
No 258
>PRK01742 tolB translocation protein TolB; Provisional
Probab=97.94 E-value=0.00016 Score=42.03 Aligned_cols=72 Identities=13% Similarity=0.162 Sum_probs=47.8
Q ss_pred EeccCCCcCEEEEEEccCCCEEEEe-CCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 7 TFVHSNNSAVRSISFCSKQHTLISG-GDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
.+..+ ...+....|+|+++.++.. ..++...+|+++.... ... ....|+|+++.++..+.++ +.+||+.+
T Consensus 286 ~lt~~-~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~~~-~~~~~SpDG~~ia~~~~~~-i~~~Dl~~ 362 (429)
T PRK01742 286 QLTSG-AGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVGGRG-YSAQISADGKTLVMINGDN-VVKQDLTS 362 (429)
T ss_pred eeccC-CCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEecCCC-CCccCCCCCCEEEEEcCCC-EEEEECCC
Confidence 34444 5556788999999876644 4567788887753221 111 4567899999888776654 55688876
Q ss_pred Ce
Q psy16880 80 KL 81 (84)
Q Consensus 80 ~~ 81 (84)
++
T Consensus 363 g~ 364 (429)
T PRK01742 363 GS 364 (429)
T ss_pred CC
Confidence 64
No 259
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.91 E-value=0.00029 Score=41.35 Aligned_cols=69 Identities=13% Similarity=0.163 Sum_probs=46.6
Q ss_pred CcCEEEEEEccCCCEEEEeCC-C--CcEEEEeCCCCCC------CCCEEEEEEccCCCEEEE-ecCCCc--EEEEeCCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGD-D--GSICMWNLNSKLC------DSAVRSISFCSKQRTLIS-GGDDGS--ICMWNLNSK 80 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~-~--~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~-~~~~~~--i~~~~~~~~ 80 (84)
...+....|+|+++.++..+. + ..+.++|+.++.. ........|+|+++.++. ...++. |.++|+.++
T Consensus 217 ~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg 296 (448)
T PRK04792 217 PEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATK 296 (448)
T ss_pred CCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCC
Confidence 345678899999998776532 2 3577788866543 334457899999997764 444554 777787665
Q ss_pred e
Q psy16880 81 L 81 (84)
Q Consensus 81 ~ 81 (84)
+
T Consensus 297 ~ 297 (448)
T PRK04792 297 A 297 (448)
T ss_pred C
Confidence 4
No 260
>KOG1334|consensus
Probab=97.91 E-value=5.3e-05 Score=44.39 Aligned_cols=41 Identities=22% Similarity=0.407 Sum_probs=36.0
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC 47 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~ 47 (84)
..+..| .+.|..+.|+..|..+++++.+..+.+||......
T Consensus 136 ~kL~~H-~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~ 176 (559)
T KOG1334|consen 136 KKLNKH-KGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSP 176 (559)
T ss_pred hcccCC-CCccceeeecccCceeeccCccceEEeehhhccCc
Confidence 456778 99999999999999999999999999999876544
No 261
>KOG1645|consensus
Probab=97.91 E-value=6.5e-05 Score=43.15 Aligned_cols=72 Identities=13% Similarity=0.200 Sum_probs=58.5
Q ss_pred ccCCCcCEEEEEEccCCC-EEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccC-CCEEEEecCCCcEEEEeCCCC
Q psy16880 9 VHSNNSAVRSISFCSKQH-TLISGGDDGSICMWNLNSKLC------DSAVRSISFCSK-QRTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 9 ~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~ 80 (84)
..+ ...|..++++|..+ ++..++.+..+.+.|+.+... ...+..++|.-+ .+.+..|...|.+.+||++..
T Consensus 190 p~~-g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 190 PGE-GSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQP 268 (463)
T ss_pred ccc-chhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEEeccCceEEEEEccCC
Confidence 344 56789999999776 788899999999999987655 678889999864 467788888999999999754
Q ss_pred e
Q psy16880 81 L 81 (84)
Q Consensus 81 ~ 81 (84)
.
T Consensus 269 ~ 269 (463)
T KOG1645|consen 269 E 269 (463)
T ss_pred C
Confidence 3
No 262
>PRK02889 tolB translocation protein TolB; Provisional
Probab=97.88 E-value=0.00036 Score=40.63 Aligned_cols=69 Identities=12% Similarity=0.103 Sum_probs=45.2
Q ss_pred CcCEEEEEEccCCCEEEEeCC-CCcEEEEeCC--CCCC------CCCEEEEEEccCCCEEEEecCCC---cEEEEeCCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGD-DGSICMWNLN--SKLC------DSAVRSISFCSKQRTLISGGDDG---SICMWNLNSK 80 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~-~~~~~~~d~~--~~~~------~~~v~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~ 80 (84)
.+......|+|+++.++..+. .+...+|.+. .... .......+|+|+++.++..+.++ .|.+||+.++
T Consensus 283 ~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g 362 (427)
T PRK02889 283 SGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATG 362 (427)
T ss_pred CCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCC
Confidence 344456789999998765543 4566666553 2222 22234578999999888766543 5889998765
Q ss_pred e
Q psy16880 81 L 81 (84)
Q Consensus 81 ~ 81 (84)
+
T Consensus 363 ~ 363 (427)
T PRK02889 363 Q 363 (427)
T ss_pred C
Confidence 4
No 263
>KOG4190|consensus
Probab=97.84 E-value=8.4e-05 Score=44.67 Aligned_cols=79 Identities=16% Similarity=0.296 Sum_probs=54.3
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------------------------------
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------------------------------- 47 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------------------------------- 47 (84)
..+..+++.| +.+|.++.|-.+.+.++ +.|+-+.+||...+..
T Consensus 774 saCQfTY~aH-kk~i~~igfL~~lr~i~--ScD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsae 850 (1034)
T KOG4190|consen 774 SACQFTYQAH-KKPIHDIGFLADLRSIA--SCDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAE 850 (1034)
T ss_pred ceeeeEhhhc-cCcccceeeeeccceee--eccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccch
Confidence 3477788888 88999988877776654 4567788898754432
Q ss_pred -------------------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 48 -------------------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 48 -------------------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
+..+++++..+.|++++.+-..|.|.+.|.++++.+
T Consensus 851 STVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vI 911 (1034)
T KOG4190|consen 851 STVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVI 911 (1034)
T ss_pred hhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCcee
Confidence 234566666666666666666677777777766654
No 264
>PRK04922 tolB translocation protein TolB; Provisional
Probab=97.81 E-value=0.0011 Score=38.80 Aligned_cols=68 Identities=9% Similarity=0.082 Sum_probs=44.3
Q ss_pred cCEEEEEEccCCCEEEEeC-CCCc--EEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCC---cEEEEeCCCCe
Q psy16880 14 SAVRSISFCSKQHTLISGG-DDGS--ICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDG---SICMWNLNSKL 81 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~-~~~~--~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~ 81 (84)
......+|+|+++.++..+ ..+. +.++|+..... .......+|+|+++.++..+.++ .|.+|++.+++
T Consensus 292 ~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~ 371 (433)
T PRK04922 292 GIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGS 371 (433)
T ss_pred CCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCC
Confidence 3445679999999777654 3444 44555544333 22344689999999887654432 58899987654
No 265
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.80 E-value=0.001 Score=38.92 Aligned_cols=69 Identities=12% Similarity=0.150 Sum_probs=47.4
Q ss_pred CcCEEEEEEccCCCEEEEeCC---CCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecC---CCcEEEEeCCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGD---DGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGD---DGSICMWNLNSK 80 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~---~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~ 80 (84)
...+....|+|+++.++.... ...+.+||+..+.. ...+....|+|+++.++.... ...+.++++.++
T Consensus 326 ~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g 405 (428)
T PRK01029 326 YRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITK 405 (428)
T ss_pred CCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 345567889999998775533 23678889876654 235677899999988764332 345778887765
Q ss_pred e
Q psy16880 81 L 81 (84)
Q Consensus 81 ~ 81 (84)
+
T Consensus 406 ~ 406 (428)
T PRK01029 406 K 406 (428)
T ss_pred C
Confidence 4
No 266
>PRK03629 tolB translocation protein TolB; Provisional
Probab=97.80 E-value=0.0012 Score=38.63 Aligned_cols=69 Identities=14% Similarity=0.154 Sum_probs=45.2
Q ss_pred CcCEEEEEEccCCCEEEEeCC-CCcEEEE--eCCCCCC------CCCEEEEEEccCCCEEEEecCC---CcEEEEeCCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGD-DGSICMW--NLNSKLC------DSAVRSISFCSKQRTLISGGDD---GSICMWNLNSK 80 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~-~~~~~~~--d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~ 80 (84)
...+....|+|+++.++..+. .+...+| |+..... ........|+|+++.++..+.+ ..+.+||+.++
T Consensus 286 ~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g 365 (429)
T PRK03629 286 RSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG 365 (429)
T ss_pred CCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCC
Confidence 345678899999998765554 3444555 5544332 2345668899999988765543 34778888765
Q ss_pred e
Q psy16880 81 L 81 (84)
Q Consensus 81 ~ 81 (84)
+
T Consensus 366 ~ 366 (429)
T PRK03629 366 G 366 (429)
T ss_pred C
Confidence 4
No 267
>KOG2041|consensus
Probab=97.79 E-value=0.00021 Score=44.17 Aligned_cols=70 Identities=20% Similarity=0.297 Sum_probs=58.7
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
+++++| .+.|..+.|+...+.|.+...+|.+.+|-+-.+.- .+.|.+++|..+|..+.-+-.||.+.+=.
T Consensus 65 QtLeGH-~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGs 143 (1189)
T KOG2041|consen 65 QTLEGH-NASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGS 143 (1189)
T ss_pred hhhccC-cceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEe
Confidence 578899 99999999999999999999999999998865544 56799999999998887777777766543
No 268
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.78 E-value=0.0011 Score=37.95 Aligned_cols=67 Identities=6% Similarity=0.108 Sum_probs=51.3
Q ss_pred EEEEEccCCCEEEEeC----------CCCcEEEEeCCCCCC------CCCEEEEEEccCCC-EEEEec-CCCcEEEEeCC
Q psy16880 17 RSISFCSKQHTLISGG----------DDGSICMWNLNSKLC------DSAVRSISFCSKQR-TLISGG-DDGSICMWNLN 78 (84)
Q Consensus 17 ~~~~~~~~~~~l~~~~----------~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~-~~~~~~-~~~~i~~~~~~ 78 (84)
.-++++++++.+.... ....+.++|..+.+. ...+..++++|+++ .+++.. .++.+.+.|..
T Consensus 251 q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~ 330 (352)
T TIGR02658 251 QQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAE 330 (352)
T ss_pred eeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEECc
Confidence 3489999888776632 124688889877766 67889999999998 776555 47889999999
Q ss_pred CCeec
Q psy16880 79 SKLCD 83 (84)
Q Consensus 79 ~~~~~ 83 (84)
+++.+
T Consensus 331 t~k~i 335 (352)
T TIGR02658 331 TGKEL 335 (352)
T ss_pred CCeEE
Confidence 88765
No 269
>KOG4497|consensus
Probab=97.78 E-value=0.00064 Score=38.59 Aligned_cols=68 Identities=10% Similarity=0.317 Sum_probs=54.3
Q ss_pred CEEEEEEccCCCEEEEeCCC--CcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 15 AVRSISFCSKQHTLISGGDD--GSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~~~~~~--~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
.+.-++|++|..++++-+.. ..+-+||++..+. ..+|....|.|..+.++.+.....+.+|.+....+
T Consensus 320 g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~prL~vctg~srLY~W~psg~~~ 395 (447)
T KOG4497|consen 320 GAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRV 395 (447)
T ss_pred ccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhccceeEEEeCCCCceEEEEcCCceEEEEcCCCceE
Confidence 36788999999998887543 4677899987766 67899999999988888887777899998765443
No 270
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.76 E-value=0.0009 Score=39.15 Aligned_cols=68 Identities=12% Similarity=0.156 Sum_probs=44.2
Q ss_pred CEEEEEEccCCCEEEEeC-CCCcEEEEeC--CC--CCC------CCCEEEEEEccCCCEEEEecCC---CcEEEEeCCCC
Q psy16880 15 AVRSISFCSKQHTLISGG-DDGSICMWNL--NS--KLC------DSAVRSISFCSKQRTLISGGDD---GSICMWNLNSK 80 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~~~~-~~~~~~~~d~--~~--~~~------~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~ 80 (84)
.....+|+|+|+.++..+ .++...+|.+ .. ... ...+....|+|+++.++....+ ..|.+||+.++
T Consensus 282 ~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g 361 (428)
T PRK01029 282 TQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATG 361 (428)
T ss_pred CcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCC
Confidence 345678999998766543 4565555543 21 111 3456778999999988766543 35889998766
Q ss_pred ee
Q psy16880 81 LC 82 (84)
Q Consensus 81 ~~ 82 (84)
+.
T Consensus 362 ~~ 363 (428)
T PRK01029 362 RD 363 (428)
T ss_pred Ce
Confidence 53
No 271
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.72 E-value=0.0016 Score=37.01 Aligned_cols=64 Identities=16% Similarity=0.236 Sum_probs=51.6
Q ss_pred EEEEEEccCCCEEEEeCCCC-cEEEEeCCCCCC----------CCCEEEEEEccCCCEEEEecC-CCcEEEEeCCC
Q psy16880 16 VRSISFCSKQHTLISGGDDG-SICMWNLNSKLC----------DSAVRSISFCSKQRTLISGGD-DGSICMWNLNS 79 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~~~~~-~~~~~d~~~~~~----------~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~~~ 79 (84)
+....+.|+++++++....- .+.+|++..+.. ....+++.|+|+++...+.+. +++|.+|...+
T Consensus 147 ~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~ 222 (346)
T COG2706 147 VHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNP 222 (346)
T ss_pred cceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcC
Confidence 67888999999988875433 688899886554 567899999999998877765 88999998765
No 272
>PRK05137 tolB translocation protein TolB; Provisional
Probab=97.70 E-value=0.0013 Score=38.50 Aligned_cols=69 Identities=16% Similarity=0.214 Sum_probs=46.2
Q ss_pred CcCEEEEEEccCCCEEE-EeCCCCc--EEEEeCCCCCC------CCCEEEEEEccCCCEEEEecC-CC--cEEEEeCCCC
Q psy16880 13 NSAVRSISFCSKQHTLI-SGGDDGS--ICMWNLNSKLC------DSAVRSISFCSKQRTLISGGD-DG--SICMWNLNSK 80 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~-~~~~~~~--~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~-~~--~i~~~~~~~~ 80 (84)
.+.+...+|+|+++.++ +.+.++. +.++|+..... ........|+|+++.++..+. ++ .|.++|..++
T Consensus 245 ~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~ 324 (435)
T PRK05137 245 PGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGS 324 (435)
T ss_pred CCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCC
Confidence 45667889999998764 5555554 56667765544 334566899999998876653 33 5777777654
Q ss_pred e
Q psy16880 81 L 81 (84)
Q Consensus 81 ~ 81 (84)
+
T Consensus 325 ~ 325 (435)
T PRK05137 325 N 325 (435)
T ss_pred C
Confidence 3
No 273
>KOG3617|consensus
Probab=97.70 E-value=3.6e-05 Score=48.10 Aligned_cols=63 Identities=14% Similarity=0.342 Sum_probs=55.4
Q ss_pred EEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy16880 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (84)
+.+++|+|..-.|++|-..+.+.+|..++... +..|..+.|+++|..++++..-|.+.+|...
T Consensus 62 atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 62 ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred hhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 56789999999999999999999998876544 6789999999999999999999999999754
No 274
>KOG2321|consensus
Probab=97.70 E-value=0.0002 Score=42.97 Aligned_cols=67 Identities=15% Similarity=0.334 Sum_probs=53.6
Q ss_pred CEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccC--CCEEEEecCCCcEEEEeCCCCee
Q psy16880 15 AVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSK--QRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
.|.+++|..+|-.++.|...|.+.+||++...+ +-+|-.+.|.+. +..+++. ....+++||-.+++.
T Consensus 230 svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~ 306 (703)
T KOG2321|consen 230 SVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKP 306 (703)
T ss_pred cceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEec-chHHhhhcccccCCc
Confidence 389999998899999999999999999998766 567888888765 3334443 456799999887765
No 275
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.66 E-value=0.0022 Score=36.98 Aligned_cols=66 Identities=15% Similarity=0.177 Sum_probs=44.6
Q ss_pred CEEEEEEccCCCEEEEeCC-CC--cEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCC---cEEEEeCCCC
Q psy16880 15 AVRSISFCSKQHTLISGGD-DG--SICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDG---SICMWNLNSK 80 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~~~~~-~~--~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~ 80 (84)
......|+|+++.++..+. .+ .+.++|+..... ...+....|+|+++.++....++ .|.++|+.++
T Consensus 279 ~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~ 356 (417)
T TIGR02800 279 IDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGG 356 (417)
T ss_pred CCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCC
Confidence 3446689999987765443 33 456667654433 34456788999999888777654 6888887654
No 276
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.64 E-value=0.0013 Score=42.47 Aligned_cols=66 Identities=11% Similarity=0.114 Sum_probs=54.1
Q ss_pred EEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------------------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 17 RSISFCSKQHTLISGGDDGSICMWNLNSKLC--------------------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 17 ~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
..+++++++..+++-..++.|++||..+... -....+++++++++.+++-+.++.|++||
T Consensus 807 ~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid 886 (1057)
T PLN02919 807 LGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLD 886 (1057)
T ss_pred ceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEE
Confidence 4778899999999999999999999875433 12567899999999888888889999999
Q ss_pred CCCCee
Q psy16880 77 LNSKLC 82 (84)
Q Consensus 77 ~~~~~~ 82 (84)
+.+++.
T Consensus 887 ~~~~~~ 892 (1057)
T PLN02919 887 LNKGEA 892 (1057)
T ss_pred CCCCcc
Confidence 987653
No 277
>KOG1275|consensus
Probab=97.63 E-value=0.00057 Score=43.15 Aligned_cols=73 Identities=21% Similarity=0.390 Sum_probs=55.5
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCC---------CCcEEEEeCCCCCC--------------------------
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGD---------DGSICMWNLNSKLC-------------------------- 47 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------~~~~~~~d~~~~~~-------------------------- 47 (84)
+.++++..| .+.|.+++. .|..|++++. |..+.+||++....
T Consensus 208 ~~iht~~aH-s~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~ 284 (1118)
T KOG1275|consen 208 ETIHTFDAH-SGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVT 284 (1118)
T ss_pred ceeeeeecc-ccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEE
Confidence 456777777 888877655 6888887754 55678899875433
Q ss_pred ---------------------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy16880 48 ---------------------------DSAVRSISFCSKQRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 48 ---------------------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (84)
.+.+..+.+++++..++.+..+|.|.+|..+
T Consensus 285 S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~~ 342 (1118)
T KOG1275|consen 285 SQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWADR 342 (1118)
T ss_pred ecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecCC
Confidence 3458889999999999999999999999743
No 278
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.58 E-value=0.0039 Score=35.80 Aligned_cols=78 Identities=9% Similarity=0.025 Sum_probs=54.1
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCC----------CCcEEEEeCCCCCC------CC--------CEEEEEEcc
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGD----------DGSICMWNLNSKLC------DS--------AVRSISFCS 58 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------~~~~~~~d~~~~~~------~~--------~v~~~~~~~ 58 (84)
+.+.+++.- ..+- .+ .+|+++.+..+.. +..+.+||..+... +. ....++++|
T Consensus 38 ~v~g~i~~G-~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~ 114 (352)
T TIGR02658 38 RVLGMTDGG-FLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTP 114 (352)
T ss_pred EEEEEEEcc-CCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECC
Confidence 444555443 3332 24 8999987766654 77999999988766 11 123788999
Q ss_pred CCCEEEEec-C-CCcEEEEeCCCCeec
Q psy16880 59 KQRTLISGG-D-DGSICMWNLNSKLCD 83 (84)
Q Consensus 59 ~~~~~~~~~-~-~~~i~~~~~~~~~~~ 83 (84)
+++.++... . +..+.+.|+.+++.+
T Consensus 115 dgk~l~V~n~~p~~~V~VvD~~~~kvv 141 (352)
T TIGR02658 115 DNKTLLFYQFSPSPAVGVVDLEGKAFV 141 (352)
T ss_pred CCCEEEEecCCCCCEEEEEECCCCcEE
Confidence 999887654 3 678999999988764
No 279
>KOG3621|consensus
Probab=97.55 E-value=0.00049 Score=42.09 Aligned_cols=67 Identities=21% Similarity=0.351 Sum_probs=54.5
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
.+.+..+..+++..+.++|+..+.|.++.++.... ...|++++|+++++.+.+|...|++..-.+.+
T Consensus 76 ~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 76 TGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred cceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 44566677788888899999999999998875433 46799999999999999999999988766554
No 280
>KOG0309|consensus
Probab=97.54 E-value=0.00063 Score=42.29 Aligned_cols=75 Identities=17% Similarity=0.354 Sum_probs=58.6
Q ss_pred EEEeccCCCcCEEEEEEccCC-CEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQ-HTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
...+-+| ...|..+-|+|+. ..+++++-+..+..||++.... ...-..+.|+.....++..++.+.|.+|
T Consensus 107 ef~lhgh-sraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vw 185 (1081)
T KOG0309|consen 107 EFVLHGH-SRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVW 185 (1081)
T ss_pred EEEEecC-ccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEE
Confidence 3455667 7889999999954 5888999999999999987655 4556778888655566677778889999
Q ss_pred eCCCC
Q psy16880 76 NLNSK 80 (84)
Q Consensus 76 ~~~~~ 80 (84)
|.+.+
T Consensus 186 d~r~g 190 (1081)
T KOG0309|consen 186 DLRKG 190 (1081)
T ss_pred eccCC
Confidence 98754
No 281
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=97.49 E-value=0.0024 Score=40.84 Aligned_cols=63 Identities=16% Similarity=0.258 Sum_probs=52.2
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEE----eCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMW----NLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~----d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
.+.|.++.|.++...++.+..+|.+.+. +...... ...|.+++|+|++..++.+..++++.+-
T Consensus 75 ~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~m 147 (928)
T PF04762_consen 75 NDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLM 147 (928)
T ss_pred CCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEE
Confidence 4678999999999999999999999888 5544433 7899999999999999988888776654
No 282
>KOG2079|consensus
Probab=97.48 E-value=0.0015 Score=41.97 Aligned_cols=63 Identities=24% Similarity=0.510 Sum_probs=47.1
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
.++|.+++|+.+|..+++|-.+|.+.+||+...+. ...+-.+.+..++..++++...|. +|.+
T Consensus 130 ~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 130 QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred CCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 57899999999999999999999999999987655 233444555555556777766554 5543
No 283
>KOG4714|consensus
Probab=97.48 E-value=0.00048 Score=37.84 Aligned_cols=37 Identities=16% Similarity=0.469 Sum_probs=31.8
Q ss_pred eccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCC
Q psy16880 8 FVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSK 45 (84)
Q Consensus 8 ~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~ 45 (84)
+..| +.++..+-|+| ++..|++++++|.+-.||..+.
T Consensus 219 l~ah-k~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~ 256 (319)
T KOG4714|consen 219 LKAH-KAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTT 256 (319)
T ss_pred HHHh-hhhhhheeccCCCchheeEecCCCcEEEEcCCCc
Confidence 4456 88899999999 6789999999999999998854
No 284
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.46 E-value=0.0067 Score=35.40 Aligned_cols=68 Identities=21% Similarity=0.189 Sum_probs=44.1
Q ss_pred cCEEEEEEccCCCEEE-EeCCCC--cEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecC-CC--cEEEEeCCCCe
Q psy16880 14 SAVRSISFCSKQHTLI-SGGDDG--SICMWNLNSKLC------DSAVRSISFCSKQRTLISGGD-DG--SICMWNLNSKL 81 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~-~~~~~~--~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~-~~--~i~~~~~~~~~ 81 (84)
+.+...+|+|+++.++ +...++ .+.++|+.++.. ........|+|+++.++..+. ++ .|.++++.+++
T Consensus 243 g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~ 322 (430)
T PRK00178 243 GLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGR 322 (430)
T ss_pred CCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 3445689999998776 444444 566778876544 334556789999987765543 33 46667776554
No 285
>KOG0882|consensus
Probab=97.41 E-value=0.0021 Score=37.90 Aligned_cols=71 Identities=13% Similarity=0.171 Sum_probs=61.5
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------------------CCCEEEEEEccCCCEEEEecCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------------------DSAVRSISFCSKQRTLISGGDDG 70 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------------------~~~v~~~~~~~~~~~~~~~~~~~ 70 (84)
..+|.++.+.+.+....+....|.+.-|....... .....++.|+|++..+.+-..|.
T Consensus 144 ~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~Dr 223 (558)
T KOG0882|consen 144 FSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDR 223 (558)
T ss_pred cCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCccc
Confidence 89999999999999999999999999998873111 56788999999999999988999
Q ss_pred cEEEEeCCCCeec
Q psy16880 71 SICMWNLNSKLCD 83 (84)
Q Consensus 71 ~i~~~~~~~~~~~ 83 (84)
.|++++.++++.+
T Consensus 224 kVR~F~~KtGklv 236 (558)
T KOG0882|consen 224 KVRGFVFKTGKLV 236 (558)
T ss_pred EEEEEEeccchhh
Confidence 9999999988754
No 286
>KOG2079|consensus
Probab=97.41 E-value=0.00061 Score=43.59 Aligned_cols=60 Identities=17% Similarity=0.361 Sum_probs=48.8
Q ss_pred CCCEEEEeCCCCcEEEEeCCCC-CC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 24 KQHTLISGGDDGSICMWNLNSK-LC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 24 ~~~~l~~~~~~~~~~~~d~~~~-~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
.+..++.|+..|.+...|.... .. ..+|.+++|+.+++.++.|-.+|.|.+||...++.+
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l 165 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKIL 165 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcce
Confidence 4566778888888887777642 21 779999999999999999999999999999887654
No 287
>KOG1354|consensus
Probab=97.39 E-value=0.0017 Score=37.09 Aligned_cols=68 Identities=12% Similarity=0.372 Sum_probs=52.8
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------------------------CCCEEEEEEccCC--CEEEEe
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------------------------DSAVRSISFCSKQ--RTLISG 66 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------------------------~~~v~~~~~~~~~--~~~~~~ 66 (84)
-+.|.++.|.-.|.+|++|..+|.+.+|.-..... +..|..+.|.+++ ..++..
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 35678999999999999999999999885432221 5568888998754 467788
Q ss_pred cCCCcEEEEeCCCC
Q psy16880 67 GDDGSICMWNLNSK 80 (84)
Q Consensus 67 ~~~~~i~~~~~~~~ 80 (84)
..|.+|++|.++.+
T Consensus 105 tNdktiKlWKi~er 118 (433)
T KOG1354|consen 105 TNDKTIKLWKIRER 118 (433)
T ss_pred cCCcceeeeeeecc
Confidence 88999999987643
No 288
>KOG4640|consensus
Probab=97.39 E-value=0.0012 Score=40.07 Aligned_cols=44 Identities=18% Similarity=0.206 Sum_probs=35.8
Q ss_pred ceEEEeccCCCcCEE-EEEEccCCCEEEEeCCCCcEEEEeCCCCCC
Q psy16880 3 SIIHTFVHSNNSAVR-SISFCSKQHTLISGGDDGSICMWNLNSKLC 47 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~ 47 (84)
+.+.+++.+ ..++. +++|.|+|..++.|-.||.+++.|+..+..
T Consensus 52 qRlwtip~p-~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~ 96 (665)
T KOG4640|consen 52 QRLWTIPIP-GENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGR 96 (665)
T ss_pred ceeEeccCC-CCccceeeeecCCCCEEEEEecCCeEEEEEccCCCc
Confidence 345667666 45555 999999999999999999999999987654
No 289
>KOG4547|consensus
Probab=97.35 E-value=0.004 Score=37.39 Aligned_cols=71 Identities=21% Similarity=0.421 Sum_probs=51.7
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccC-----CCEEEEec-CCC
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSK-----QRTLISGG-DDG 70 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~-----~~~~~~~~-~~~ 70 (84)
..+..... +..+.+++.+|++..+++++ +.+.+||+.+... .+.|++++|... |..++++. .+.
T Consensus 136 ~~~~~~~~-~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r 212 (541)
T KOG4547|consen 136 IIRIWKEQ-KPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAER 212 (541)
T ss_pred eeeeeccC-CCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeecccccc
Confidence 34444444 56678899999999998887 6799999998877 778999999765 45555443 345
Q ss_pred cEEEEeC
Q psy16880 71 SICMWNL 77 (84)
Q Consensus 71 ~i~~~~~ 77 (84)
-|.+|-.
T Consensus 213 ~i~~w~v 219 (541)
T KOG4547|consen 213 GITVWVV 219 (541)
T ss_pred ceeEEEE
Confidence 5777743
No 290
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=97.32 E-value=0.0092 Score=34.01 Aligned_cols=67 Identities=15% Similarity=0.287 Sum_probs=47.9
Q ss_pred CEEEEEEccCCCEEEEe-CCCCcEEEEeCCCC--CC---------CCCEEEEEEccCCCEEEEecC-CCcEEEEeC--CC
Q psy16880 15 AVRSISFCSKQHTLISG-GDDGSICMWNLNSK--LC---------DSAVRSISFCSKQRTLISGGD-DGSICMWNL--NS 79 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~~~-~~~~~~~~~d~~~~--~~---------~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~--~~ 79 (84)
....+.++|++++|... .....|.+|+++.. .. ....+.+.++|++++++++.. ++.|.+|+. .+
T Consensus 246 ~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~t 325 (345)
T PF10282_consen 246 APAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDT 325 (345)
T ss_dssp SEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTT
T ss_pred CceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCC
Confidence 46788999999977655 45668999999533 22 445899999999999887764 568888865 45
Q ss_pred Ce
Q psy16880 80 KL 81 (84)
Q Consensus 80 ~~ 81 (84)
+.
T Consensus 326 G~ 327 (345)
T PF10282_consen 326 GK 327 (345)
T ss_dssp TE
T ss_pred Cc
Confidence 54
No 291
>KOG2041|consensus
Probab=97.27 E-value=0.0039 Score=39.01 Aligned_cols=69 Identities=17% Similarity=0.369 Sum_probs=55.7
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------------------CCCEEEEEEccCCCEEEEecCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------------------DSAVRSISFCSKQRTLISGGDDG 70 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------------------~~~v~~~~~~~~~~~~~~~~~~~ 70 (84)
.....+++|+....+++.|+.+|.+++.-+.+... ...|..+.|..+...+-+...+|
T Consensus 14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G 93 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG 93 (1189)
T ss_pred CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence 45678999999999999999999999876653322 45688889988888888888999
Q ss_pred cEEEEeCCCCe
Q psy16880 71 SICMWNLNSKL 81 (84)
Q Consensus 71 ~i~~~~~~~~~ 81 (84)
.|.+|.+-.+.
T Consensus 94 lIiVWmlykgs 104 (1189)
T KOG2041|consen 94 LIIVWMLYKGS 104 (1189)
T ss_pred eEEEEeeeccc
Confidence 99999765443
No 292
>KOG1354|consensus
Probab=97.18 E-value=0.0014 Score=37.38 Aligned_cols=75 Identities=20% Similarity=0.356 Sum_probs=54.0
Q ss_pred eEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------------CCCEEEEEEccCC-CEEEEec
Q psy16880 4 IIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------------DSAVRSISFCSKQ-RTLISGG 67 (84)
Q Consensus 4 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------------~~~v~~~~~~~~~-~~~~~~~ 67 (84)
|.+.+..-|+--|.+++++.++..++++. |-.+.+|.+..... ..-|++..|+|.. .+++-.+
T Consensus 155 prRv~aNaHtyhiNSIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSS 233 (433)
T KOG1354|consen 155 PRRVYANAHTYHINSISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSS 233 (433)
T ss_pred eeeeccccceeEeeeeeecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEec
Confidence 34444333366789999999999998865 55777887653322 3457888899854 5667778
Q ss_pred CCCcEEEEeCCC
Q psy16880 68 DDGSICMWNLNS 79 (84)
Q Consensus 68 ~~~~i~~~~~~~ 79 (84)
..|+|++-|++.
T Consensus 234 SKGtIrLcDmR~ 245 (433)
T KOG1354|consen 234 SKGTIRLCDMRQ 245 (433)
T ss_pred CCCcEEEeechh
Confidence 899999999884
No 293
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.13 E-value=0.019 Score=33.96 Aligned_cols=66 Identities=21% Similarity=0.224 Sum_probs=42.5
Q ss_pred EEEEEEccCCCEEEE-eCCCCc--EEEEeCCCCCC------CCCEEEEEEccCCCEEEEecC-CC--cEEEEeCCCCe
Q psy16880 16 VRSISFCSKQHTLIS-GGDDGS--ICMWNLNSKLC------DSAVRSISFCSKQRTLISGGD-DG--SICMWNLNSKL 81 (84)
Q Consensus 16 v~~~~~~~~~~~l~~-~~~~~~--~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~-~~--~i~~~~~~~~~ 81 (84)
....+|+|+++.++. ...++. +.++|+.++.. ........|+|+++.++..+. ++ .|.++++.+++
T Consensus 264 ~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~ 341 (448)
T PRK04792 264 NGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGK 341 (448)
T ss_pred cCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 346789999987754 455554 66667765543 234567889999987765543 33 45566766554
No 294
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.10 E-value=0.0022 Score=35.49 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=31.6
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC 47 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~ 47 (84)
.+.|..|+.+|++..|++...+|.+.+|++.....
T Consensus 229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~ 263 (282)
T PF15492_consen 229 QDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRL 263 (282)
T ss_pred CCceEEEEECCCCCEEEEEEcCCeEEEEecCcchh
Confidence 67899999999999999999999999999975543
No 295
>KOG0280|consensus
Probab=97.05 E-value=0.0031 Score=35.29 Aligned_cols=51 Identities=20% Similarity=0.104 Sum_probs=41.1
Q ss_pred eccCCCcCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccC
Q psy16880 8 FVHSNNSAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSK 59 (84)
Q Consensus 8 ~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~ 59 (84)
.+.| ...|.++.-+| .+..+++|+.|..+++||.+.... .+.|..+..+|.
T Consensus 206 ~kvH-~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~ 264 (339)
T KOG0280|consen 206 SKVH-TSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPE 264 (339)
T ss_pred ceee-ecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCccccceEEEEecch
Confidence 3456 77888888877 577999999999999999985433 678899998884
No 296
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=96.96 E-value=0.024 Score=32.35 Aligned_cols=65 Identities=6% Similarity=0.211 Sum_probs=46.4
Q ss_pred cCEEEEEEccCCCEEEEeC-CCCcEEEEeCCCCC--C----------CCCEEEEEEccCCCEEEEec-CCCcEEEEeCC
Q psy16880 14 SAVRSISFCSKQHTLISGG-DDGSICMWNLNSKL--C----------DSAVRSISFCSKQRTLISGG-DDGSICMWNLN 78 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~-~~~~~~~~d~~~~~--~----------~~~v~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 78 (84)
....++.++|++++++... ....+.+|++.... . ....+++.|+|+++.+.+.. .++.|.++++.
T Consensus 144 ~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~ 222 (345)
T PF10282_consen 144 PHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYD 222 (345)
T ss_dssp TCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred ccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeec
Confidence 4567899999999777653 33478888886554 1 56789999999998876654 46788888776
No 297
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=96.95 E-value=0.013 Score=35.18 Aligned_cols=69 Identities=19% Similarity=0.367 Sum_probs=51.7
Q ss_pred CcCEEEEEEccCCCEEE--EeCCCCcEEEEeCCCCCC----CCCEEEEEEccCCCEEEEecCC---CcEEEEeCCCCe
Q psy16880 13 NSAVRSISFCSKQHTLI--SGGDDGSICMWNLNSKLC----DSAVRSISFCSKQRTLISGGDD---GSICMWNLNSKL 81 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~--~~~~~~~~~~~d~~~~~~----~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~ 81 (84)
.++|..++|.|.++.++ +|-....+.++|++..-. ++.-..+-|+|.+++++..+.+ |.+-+|+..++.
T Consensus 274 ~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl~~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf 351 (561)
T COG5354 274 KDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGNLRFYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRF 351 (561)
T ss_pred cccceeeeecccCCceeEEecccccceeecccccceEEecCCcccccccccCcccEEEEecCCccccceEEeccCCce
Confidence 68899999999887654 445677888999876533 4555677889999999887654 568889876654
No 298
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.94 E-value=0.0055 Score=24.47 Aligned_cols=29 Identities=21% Similarity=0.316 Sum_probs=15.2
Q ss_pred CEEEEEEccCC---CEEEEeCCCCcEEEEeCC
Q psy16880 15 AVRSISFCSKQ---HTLISGGDDGSICMWNLN 43 (84)
Q Consensus 15 ~v~~~~~~~~~---~~l~~~~~~~~~~~~d~~ 43 (84)
.+.+++|+|.. .+|+.+-..+.+.++|++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R 33 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTR 33 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEcc
Confidence 34555666532 355555555555566654
No 299
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=96.89 E-value=0.0026 Score=36.06 Aligned_cols=67 Identities=16% Similarity=0.319 Sum_probs=50.8
Q ss_pred cCEEEEEEccC-CCEEEEeCCCCcEEEEeCCCCCC-----------------------CCCEEEEEEccCCCEEEEecCC
Q psy16880 14 SAVRSISFCSK-QHTLISGGDDGSICMWNLNSKLC-----------------------DSAVRSISFCSKQRTLISGGDD 69 (84)
Q Consensus 14 ~~v~~~~~~~~-~~~l~~~~~~~~~~~~d~~~~~~-----------------------~~~v~~~~~~~~~~~~~~~~~~ 69 (84)
..|.+-.|+|. ...+.-.+..|.+.+-|+++... -..|+.+.|+++++++++-+.
T Consensus 222 eVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy- 300 (460)
T COG5170 222 EVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY- 300 (460)
T ss_pred HHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-
Confidence 45677788884 46677778889999999984433 457899999999998877643
Q ss_pred CcEEEEeCCCCe
Q psy16880 70 GSICMWNLNSKL 81 (84)
Q Consensus 70 ~~i~~~~~~~~~ 81 (84)
.++++||.+..+
T Consensus 301 ltvkiwDvnm~k 312 (460)
T COG5170 301 LTVKIWDVNMAK 312 (460)
T ss_pred ceEEEEeccccc
Confidence 579999987543
No 300
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=96.88 E-value=0.0051 Score=37.06 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=30.4
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 80 (84)
+..+.+.+++|+...++.|+.||.|.+||...+
T Consensus 259 ~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~ 291 (545)
T PF11768_consen 259 PSQVICCARSPSEDKLVLGCEDGSIILYDTTRG 291 (545)
T ss_pred CCcceEEecCcccceEEEEecCCeEEEEEcCCC
Confidence 788999999999999999999999999998654
No 301
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.87 E-value=0.036 Score=36.37 Aligned_cols=66 Identities=12% Similarity=0.098 Sum_probs=49.7
Q ss_pred EEEEEccCCC-EEEEeCCCCcEEEEeCCCCCC----------------------------CCCEEEEEEccCCCEEEEec
Q psy16880 17 RSISFCSKQH-TLISGGDDGSICMWNLNSKLC----------------------------DSAVRSISFCSKQRTLISGG 67 (84)
Q Consensus 17 ~~~~~~~~~~-~l~~~~~~~~~~~~d~~~~~~----------------------------~~~v~~~~~~~~~~~~~~~~ 67 (84)
..|+++|++. ++++-..++.+++||+.+... -....++++.+++..+++-.
T Consensus 743 ~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs 822 (1057)
T PLN02919 743 SGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADS 822 (1057)
T ss_pred cEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEEC
Confidence 4688999887 566667788999999864321 01346888899998878888
Q ss_pred CCCcEEEEeCCCCee
Q psy16880 68 DDGSICMWNLNSKLC 82 (84)
Q Consensus 68 ~~~~i~~~~~~~~~~ 82 (84)
.++.|++||..++..
T Consensus 823 ~N~rIrviD~~tg~v 837 (1057)
T PLN02919 823 YNHKIKKLDPATKRV 837 (1057)
T ss_pred CCCEEEEEECCCCeE
Confidence 889999999877653
No 302
>KOG2314|consensus
Probab=96.78 E-value=0.019 Score=35.02 Aligned_cols=67 Identities=18% Similarity=0.381 Sum_probs=48.2
Q ss_pred EEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----CCCEEEEEEccCCCEEEEec-----------CCCcEEEEeCCC
Q psy16880 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----DSAVRSISFCSKQRTLISGG-----------DDGSICMWNLNS 79 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----~~~v~~~~~~~~~~~~~~~~-----------~~~~i~~~~~~~ 79 (84)
-.-+.|+|.|.+|++-...| +.+|--..... -..|.-+.|+|+.+++++=+ ....+.+||+++
T Consensus 213 etyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~Hp~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~t 291 (698)
T KOG2314|consen 213 ETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFYHPGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIAT 291 (698)
T ss_pred eeeEEecCCceEEEEEeccc-eeeecCccHHHHHhccCCCceeeecCCccceEEEecCCccccCcccCCCceEEEEEccc
Confidence 35789999999999877665 56675433222 44678899999999888643 225699999998
Q ss_pred Ceec
Q psy16880 80 KLCD 83 (84)
Q Consensus 80 ~~~~ 83 (84)
+...
T Consensus 292 G~lk 295 (698)
T KOG2314|consen 292 GLLK 295 (698)
T ss_pred cchh
Confidence 8643
No 303
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=96.76 E-value=0.035 Score=32.55 Aligned_cols=71 Identities=18% Similarity=0.303 Sum_probs=48.3
Q ss_pred EEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------------CCCEEEEEEcc-----CC---C
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------------DSAVRSISFCS-----KQ---R 61 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------------~~~v~~~~~~~-----~~---~ 61 (84)
...++.. .++|.+++.+ +-.+++.|..+|.+.+.|++.+.. ...+.++.|.. ++ .
T Consensus 79 ~~l~~~~-~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi 156 (395)
T PF08596_consen 79 LTLLDAK-QGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSI 156 (395)
T ss_dssp EEEE----S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEE
T ss_pred hhheecc-CCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccce
Confidence 3444555 7899999986 677999999999999999987755 33577777762 22 3
Q ss_pred EEEEecCCCcEEEEeC
Q psy16880 62 TLISGGDDGSICMWNL 77 (84)
Q Consensus 62 ~~~~~~~~~~i~~~~~ 77 (84)
.+++|...|.+.+|.+
T Consensus 157 ~L~vGTn~G~v~~fkI 172 (395)
T PF08596_consen 157 CLLVGTNSGNVLTFKI 172 (395)
T ss_dssp EEEEEETTSEEEEEEE
T ss_pred EEEEEeCCCCEEEEEE
Confidence 5667777888888854
No 304
>KOG2066|consensus
Probab=96.76 E-value=0.064 Score=34.05 Aligned_cols=18 Identities=28% Similarity=0.403 Sum_probs=10.1
Q ss_pred CCEEEEeCCCCcEEEEeC
Q psy16880 25 QHTLISGGDDGSICMWNL 42 (84)
Q Consensus 25 ~~~l~~~~~~~~~~~~d~ 42 (84)
|..+++++.||.+.+..+
T Consensus 83 Gey~asCS~DGkv~I~sl 100 (846)
T KOG2066|consen 83 GEYVASCSDDGKVVIGSL 100 (846)
T ss_pred CceEEEecCCCcEEEeec
Confidence 556666666665555444
No 305
>KOG1275|consensus
Probab=96.76 E-value=0.017 Score=37.13 Aligned_cols=64 Identities=17% Similarity=0.293 Sum_probs=47.1
Q ss_pred EEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecC---------CCcEEEEeCCC
Q psy16880 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGD---------DGSICMWNLNS 79 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~---------~~~i~~~~~~~ 79 (84)
|.-|+. +++.+.+|...|.|.+-|.+.... .+.++.+.. +|+.+++++. |..+++||++.
T Consensus 180 v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRm 255 (1118)
T KOG1275|consen 180 VTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRM 255 (1118)
T ss_pred eEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhhh
Confidence 555544 688999999999999999987665 555655554 5777887764 55688999987
Q ss_pred Ceec
Q psy16880 80 KLCD 83 (84)
Q Consensus 80 ~~~~ 83 (84)
.+.+
T Consensus 256 mral 259 (1118)
T KOG1275|consen 256 MRAL 259 (1118)
T ss_pred hhcc
Confidence 6643
No 306
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=96.75 E-value=0.05 Score=32.81 Aligned_cols=70 Identities=9% Similarity=0.200 Sum_probs=56.2
Q ss_pred CcCEEEEEEccCCCEEEEeCCCC-cEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDG-SICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~-~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
.+.|.-..+..++.-++.|..++ .+-++|..+... -+.|.++..+|+|+.++.+-....+.+.|+.+++.
T Consensus 359 ~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv 435 (668)
T COG4946 359 KGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNV 435 (668)
T ss_pred CCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCe
Confidence 55676666777777888898898 888999987765 45799999999999888887777788888887653
No 307
>KOG1912|consensus
Probab=96.75 E-value=0.026 Score=35.85 Aligned_cols=79 Identities=15% Similarity=0.296 Sum_probs=55.8
Q ss_pred ceEEEeccCCCcCEEEEEEccCC------------CEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEcc---CC
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQ------------HTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCS---KQ 60 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~------------~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~---~~ 60 (84)
+.++.++.| ...|..++|.|.. -.++++.-.|.+.+||...... ...+-.++|-+ +.
T Consensus 46 q~iqsie~h-~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~S 124 (1062)
T KOG1912|consen 46 QLIQSIELH-QSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDS 124 (1062)
T ss_pred hhhhccccC-ccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcc
Confidence 456677778 8999999998732 1456777889999999876544 34455566543 44
Q ss_pred -CEEEEecCCCcEEEEeCCCCee
Q psy16880 61 -RTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 61 -~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
..++.......+-+|+..+++.
T Consensus 125 rd~LlaIh~ss~lvLwntdtG~k 147 (1062)
T KOG1912|consen 125 RDVLLAIHGSSTLVLWNTDTGEK 147 (1062)
T ss_pred hheeEEecCCcEEEEEEccCCce
Confidence 4556666678899998877754
No 308
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=96.74 E-value=0.015 Score=33.17 Aligned_cols=68 Identities=13% Similarity=0.402 Sum_probs=51.8
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------------------------CCCEEEEEEccC--CCEEEEe
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------------------------DSAVRSISFCSK--QRTLISG 66 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------------------------~~~v~~~~~~~~--~~~~~~~ 66 (84)
...|.++.|...|.++++|...|.+.+|.-..... +..|..+.|..+ ...++..
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 45688999999999999999999999886544331 446777887643 2466777
Q ss_pred cCCCcEEEEeCCCC
Q psy16880 67 GDDGSICMWNLNSK 80 (84)
Q Consensus 67 ~~~~~i~~~~~~~~ 80 (84)
+.|.+|++|.+..+
T Consensus 106 tNdktiKlWKiyek 119 (460)
T COG5170 106 TNDKTIKLWKIYEK 119 (460)
T ss_pred cCCceeeeeeeecc
Confidence 78999999987654
No 309
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.60 E-value=0.012 Score=23.55 Aligned_cols=30 Identities=23% Similarity=0.315 Sum_probs=24.3
Q ss_pred CEEEEEEccCCC---EEEEecCCCcEEEEeCCC
Q psy16880 50 AVRSISFCSKQR---TLISGGDDGSICMWNLNS 79 (84)
Q Consensus 50 ~v~~~~~~~~~~---~~~~~~~~~~i~~~~~~~ 79 (84)
.++++.|+|... +++..-..+.+.++|+++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 578999997544 777777789999999984
No 310
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=96.57 E-value=0.042 Score=35.60 Aligned_cols=66 Identities=12% Similarity=0.198 Sum_probs=47.9
Q ss_pred cCEEEEEEccCCCEEEEeCC---CCcEEEEeCCCCCC----------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy16880 14 SAVRSISFCSKQHTLISGGD---DGSICMWNLNSKLC----------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~---~~~~~~~d~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 80 (84)
+--.+++|-|.|+++++... ...|.+|.-+.... ...|..++|++++..++....+. |.+|-..+.
T Consensus 257 gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NY 335 (928)
T PF04762_consen 257 GLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNY 335 (928)
T ss_pred CccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCC
Confidence 44468899999999987754 34666676554433 45789999999999888876444 999976554
No 311
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=96.43 E-value=0.11 Score=32.89 Aligned_cols=68 Identities=12% Similarity=0.135 Sum_probs=48.7
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCC---------CC------------------CCCEEEEEEccCC---CE
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSK---------LC------------------DSAVRSISFCSKQ---RT 62 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~---------~~------------------~~~v~~~~~~~~~---~~ 62 (84)
...|..+..+|+|.+++..+..+...+.-.+.. .. ...|..+.|+|.+ ..
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 346888999999999988887775544322210 01 3468899999864 67
Q ss_pred EEEecCCCcEEEEeCCCC
Q psy16880 63 LISGGDDGSICMWNLNSK 80 (84)
Q Consensus 63 ~~~~~~~~~i~~~~~~~~ 80 (84)
++.-..|+.+++||+...
T Consensus 164 l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 164 LVVLTSDNTLRLYDISDP 181 (717)
T ss_pred EEEEecCCEEEEEecCCC
Confidence 777778999999998643
No 312
>KOG1920|consensus
Probab=96.39 E-value=0.089 Score=34.89 Aligned_cols=62 Identities=11% Similarity=0.172 Sum_probs=50.6
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
.+.|.++.|..+...++.+...|.+.+-|..+... ...|.+++|+|++..++.++...++.+
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~ 135 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLF 135 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEE
Confidence 35788999999888888888889888877765544 788999999999999988877666554
No 313
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=96.33 E-value=0.053 Score=32.90 Aligned_cols=34 Identities=21% Similarity=0.428 Sum_probs=25.7
Q ss_pred CEEEEEEcc----CCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 50 AVRSISFCS----KQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 50 ~v~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
.....+.+. +...+++.+.|+++++||+.+++++
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~ 253 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCL 253 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEE
Confidence 345555655 6678889999999999999998874
No 314
>KOG3914|consensus
Probab=96.30 E-value=0.085 Score=30.79 Aligned_cols=32 Identities=13% Similarity=0.183 Sum_probs=27.9
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
-+.+..++++|+.+.++++..|..|++-....
T Consensus 151 vSml~dVavS~D~~~IitaDRDEkIRvs~ypa 182 (390)
T KOG3914|consen 151 VSMLLDVAVSPDDQFIITADRDEKIRVSRYPA 182 (390)
T ss_pred hhhhheeeecCCCCEEEEecCCceEEEEecCc
Confidence 46789999999999999999999999876653
No 315
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.14 E-value=0.083 Score=33.76 Aligned_cols=61 Identities=8% Similarity=0.203 Sum_probs=43.4
Q ss_pred cCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
....|++-. ....++.|+.+|.|++||-..... ..+|.++..+.+|++++.-|.. .+.+.+
T Consensus 578 ~~Fs~~aTt-~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~t-yLlLi~ 645 (794)
T PF08553_consen 578 NNFSCFATT-EDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKT-YLLLID 645 (794)
T ss_pred CCceEEEec-CCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecc-eEEEEE
Confidence 344555544 345788899999999999543222 6799999999999998877644 355554
No 316
>PRK04043 tolB translocation protein TolB; Provisional
Probab=96.07 E-value=0.14 Score=30.37 Aligned_cols=67 Identities=12% Similarity=0.118 Sum_probs=43.7
Q ss_pred CEEEEEEccCCCE-EEEe-CC--CCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEe-cCC--CcEEEEeCCCCe
Q psy16880 15 AVRSISFCSKQHT-LISG-GD--DGSICMWNLNSKLC------DSAVRSISFCSKQRTLISG-GDD--GSICMWNLNSKL 81 (84)
Q Consensus 15 ~v~~~~~~~~~~~-l~~~-~~--~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~-~~~--~~i~~~~~~~~~ 81 (84)
......|+|+++. ++.. .. ...+.++|+.++.. ++......|+|+++.++.. +.+ ..|.++++.+++
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~ 268 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT 268 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc
Confidence 5668899999974 4432 22 34677788866544 4446677899999866543 333 457777776654
No 317
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=95.78 E-value=0.28 Score=31.58 Aligned_cols=74 Identities=12% Similarity=0.213 Sum_probs=48.5
Q ss_pred CCceEEEeccCCCcCEEEEEEccC-------CCEEEEeCCCCcEEEEeCCCCCC------------CCCEEEEEEccCCC
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSK-------QHTLISGGDDGSICMWNLNSKLC------------DSAVRSISFCSKQR 61 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~-------~~~l~~~~~~~~~~~~d~~~~~~------------~~~v~~~~~~~~~~ 61 (84)
+|+.+.....+...+|..+ .|+ ...-..|-.+..+..||.+.... ....+|++-+.+|
T Consensus 513 ~GKVV~eW~~~~~~~v~~~--~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G- 589 (794)
T PF08553_consen 513 RGKVVEEWKVHDDIPVVDI--APDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG- 589 (794)
T ss_pred CCcEEEEeecCCCcceeEe--cccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecCCc-
Confidence 3667776666522335544 332 22334566677788889875431 4567777777776
Q ss_pred EEEEecCCCcEEEEeC
Q psy16880 62 TLISGGDDGSICMWNL 77 (84)
Q Consensus 62 ~~~~~~~~~~i~~~~~ 77 (84)
.++.|+.+|.|++||-
T Consensus 590 ~iavgs~~G~IRLyd~ 605 (794)
T PF08553_consen 590 YIAVGSNKGDIRLYDR 605 (794)
T ss_pred eEEEEeCCCcEEeecc
Confidence 5899999999999984
No 318
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=95.69 E-value=0.093 Score=25.42 Aligned_cols=60 Identities=15% Similarity=0.275 Sum_probs=38.9
Q ss_pred EEEEEEcc---CC-CEEEEeCCCCcEEEEeCCCCCC----CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 16 VRSISFCS---KQ-HTLISGGDDGSICMWNLNSKLC----DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 16 v~~~~~~~---~~-~~l~~~~~~~~~~~~d~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
|.+|++.. +| ..|+.|+.|..+++|+-...-. ...|..++-...+ .++.+..+|+|-+|+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e~~~Ei~e~~~v~~L~~~~~~-~F~Y~l~NGTVGvY~ 69 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDEIVAEITETDKVTSLCSLGGG-RFAYALANGTVGVYD 69 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCcEEEEEecccceEEEEEcCCC-EEEEEecCCEEEEEe
Confidence 44555544 33 5789999999999997653222 5567777766553 466666666665554
No 319
>KOG2314|consensus
Probab=95.68 E-value=0.14 Score=31.53 Aligned_cols=64 Identities=8% Similarity=0.237 Sum_probs=45.8
Q ss_pred EEEEEEccCCCEEEEe---CCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecC------CCcEEEEeCCC
Q psy16880 16 VRSISFCSKQHTLISG---GDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGD------DGSICMWNLNS 79 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~---~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~------~~~i~~~~~~~ 79 (84)
...+-|+|.|++++.+ +..+.+.++|..-... -...+.+.|.|.|+++.+++. |.-.++|+.+.
T Consensus 495 ~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfqG 574 (698)
T KOG2314|consen 495 ANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQG 574 (698)
T ss_pred cceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccccccccceECCCCCEEEEeeehhhhccccceEEEEeec
Confidence 4678899999988766 5578899999874222 234567889999999998764 33456666543
No 320
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=95.61 E-value=0.2 Score=28.60 Aligned_cols=82 Identities=11% Similarity=0.226 Sum_probs=53.1
Q ss_pred CCceEEEecc----CCCcCEEEEEEccCCCEEEEeCCCC-------cEEEEeCCCCCC------------CCCEEEEEEc
Q psy16880 1 DGSIIHTFVH----SNNSAVRSISFCSKQHTLISGGDDG-------SICMWNLNSKLC------------DSAVRSISFC 57 (84)
Q Consensus 1 ~g~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~~-------~~~~~d~~~~~~------------~~~v~~~~~~ 57 (84)
+|+++.+.+- | ...|.-+++.+++..++..-..+ .+-+++...... .+.+-+|+++
T Consensus 147 sG~ll~q~~Lp~~~~-~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~ 225 (305)
T PF07433_consen 147 SGALLEQVELPPDLH-QLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAAD 225 (305)
T ss_pred CCceeeeeecCcccc-ccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEe
Confidence 3555555322 3 55678888888887666553222 223333322111 6889999999
Q ss_pred cCCCEE-EEecCCCcEEEEeCCCCeec
Q psy16880 58 SKQRTL-ISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 58 ~~~~~~-~~~~~~~~i~~~~~~~~~~~ 83 (84)
+++..+ +++...+.+.+||..++..+
T Consensus 226 ~~g~~ia~tsPrGg~~~~~d~~tg~~~ 252 (305)
T PF07433_consen 226 RDGRLIAVTSPRGGRVAVWDAATGRLL 252 (305)
T ss_pred CCCCEEEEECCCCCEEEEEECCCCCEe
Confidence 988766 56777889999999887754
No 321
>KOG3617|consensus
Probab=95.55 E-value=0.38 Score=31.55 Aligned_cols=34 Identities=12% Similarity=0.436 Sum_probs=30.7
Q ss_pred ccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCC
Q psy16880 9 VHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLN 43 (84)
Q Consensus 9 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~ 43 (84)
..| +.+|..+.|+++|..+.++..-|.+.+|.+.
T Consensus 98 ~th-~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 98 ETH-PAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred cCC-CCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 345 8899999999999999999999999999776
No 322
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=95.54 E-value=0.25 Score=29.41 Aligned_cols=70 Identities=11% Similarity=0.138 Sum_probs=47.8
Q ss_pred cCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccC----------------CC--EEEEec
Q psy16880 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSK----------------QR--TLISGG 67 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~----------------~~--~~~~~~ 67 (84)
-.+.++..+|.+.+.+....-|.|.++|+..... ..++.-+..... .. .++-..
T Consensus 308 R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyap 387 (415)
T PF14655_consen 308 REGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAP 387 (415)
T ss_pred ceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEec
Confidence 4478899999999999989999999999987765 112222221111 01 223456
Q ss_pred CCCcEEEEeCCCCeec
Q psy16880 68 DDGSICMWNLNSKLCD 83 (84)
Q Consensus 68 ~~~~i~~~~~~~~~~~ 83 (84)
..|.+-+|.++.+..+
T Consensus 388 rRg~lEvW~~~~g~Rv 403 (415)
T PF14655_consen 388 RRGILEVWSMRQGPRV 403 (415)
T ss_pred cCCeEEEEecCCCCEE
Confidence 7889999999887654
No 323
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=95.43 E-value=0.27 Score=30.59 Aligned_cols=31 Identities=10% Similarity=0.331 Sum_probs=21.5
Q ss_pred CCCEEEEEEccCCCEEEEe-cCCCcEEEEeCC
Q psy16880 48 DSAVRSISFCSKQRTLISG-GDDGSICMWNLN 78 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 78 (84)
.+.|+|.+|.++|..++.+ +..=.-++||-.
T Consensus 155 ~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 155 SGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred CceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence 6789999999998766544 333346677653
No 324
>KOG1832|consensus
Probab=95.42 E-value=0.049 Score=35.42 Aligned_cols=72 Identities=19% Similarity=0.353 Sum_probs=51.9
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecC-CC-cEEEEe
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGD-DG-SICMWN 76 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~-~~-~i~~~~ 76 (84)
+.++.+ +....|++|+.+.++|+.|...|.+++|++.++.. ++.++.+.=+.++.+.++.+. .. ...+|+
T Consensus 1095 ~~frd~-~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~ 1173 (1516)
T KOG1832|consen 1095 RSFRDE-TALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWD 1173 (1516)
T ss_pred hhhhcc-ccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhc
Confidence 445566 67788999999999999999999999999987765 455666665556666655443 22 345676
Q ss_pred CC
Q psy16880 77 LN 78 (84)
Q Consensus 77 ~~ 78 (84)
..
T Consensus 1174 ~~ 1175 (1516)
T KOG1832|consen 1174 AS 1175 (1516)
T ss_pred cc
Confidence 53
No 325
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=95.42 E-value=0.084 Score=31.94 Aligned_cols=70 Identities=19% Similarity=0.292 Sum_probs=50.1
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----CCCEEEEEEccCCCEEEEecC---------------CCcE
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----DSAVRSISFCSKQRTLISGGD---------------DGSI 72 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----~~~v~~~~~~~~~~~~~~~~~---------------~~~i 72 (84)
..++...+++|.|..|++.... .|.+|+...... ...|..+.|+|.++++.+=+. ++.+
T Consensus 32 ~~p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~~~~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~ 110 (561)
T COG5354 32 NWPVAYVSESPLGTYLFSEHAA-GVECWGGPSKAKLVRFRHPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNV 110 (561)
T ss_pred CcchhheeecCcchheehhhcc-ceEEccccchhheeeeecCCceecccCcccceeeeeccCCccChhhccCCccccCce
Confidence 4567788999999988876544 466777644333 567888999999988876432 3358
Q ss_pred EEEeCCCCeec
Q psy16880 73 CMWNLNSKLCD 83 (84)
Q Consensus 73 ~~~~~~~~~~~ 83 (84)
.+||..++..+
T Consensus 111 ~vwd~~sg~iv 121 (561)
T COG5354 111 FVWDIASGMIV 121 (561)
T ss_pred eEEeccCceeE
Confidence 89998877654
No 326
>PRK02888 nitrous-oxide reductase; Validated
Probab=95.18 E-value=0.43 Score=29.96 Aligned_cols=65 Identities=11% Similarity=0.132 Sum_probs=49.2
Q ss_pred CEEEEEEccCCCEEE-EeCCCCcEEEEeCCCCCC------------------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 15 AVRSISFCSKQHTLI-SGGDDGSICMWNLNSKLC------------------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~-~~~~~~~~~~~d~~~~~~------------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
....+.++|+|++++ ++..+..+.+.|...... .....+.+|.+++....+--.|..+-.|
T Consensus 322 sPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kw 401 (635)
T PRK02888 322 NPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKW 401 (635)
T ss_pred CccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEE
Confidence 346889999998765 556688999999976431 4456788899888766666678899999
Q ss_pred eCCC
Q psy16880 76 NLNS 79 (84)
Q Consensus 76 ~~~~ 79 (84)
++..
T Consensus 402 n~~~ 405 (635)
T PRK02888 402 NIEA 405 (635)
T ss_pred ehHH
Confidence 9764
No 327
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=95.09 E-value=0.47 Score=29.86 Aligned_cols=61 Identities=13% Similarity=0.317 Sum_probs=43.7
Q ss_pred EEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEc--cCCCEEEEecCCCcEEEEe
Q psy16880 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFC--SKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~--~~~~~~~~~~~~~~i~~~~ 76 (84)
..-+.-+.-++..+.-+....+.+||.+.... ...|.++.|. |++..+++++..+.|.++.
T Consensus 32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT 102 (631)
T ss_pred cceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence 33444444444444445566889999986655 5678999986 6888999999999999884
No 328
>KOG4649|consensus
Probab=95.05 E-value=0.31 Score=27.55 Aligned_cols=60 Identities=12% Similarity=0.142 Sum_probs=44.2
Q ss_pred CCCEEEEeCCCCcEEEEeCCCCCC------CCCEE-EEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 24 KQHTLISGGDDGSICMWNLNSKLC------DSAVR-SISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 24 ~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
-+.+++.|...+.+.+.+.+++.. ...|- .-...+++..+.++++|+..+..|+++..++
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cV 128 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCV 128 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceE
Confidence 466788889999998888888755 11221 1223567788999999999999999887764
No 329
>PRK04043 tolB translocation protein TolB; Provisional
Probab=95.02 E-value=0.39 Score=28.56 Aligned_cols=69 Identities=17% Similarity=0.200 Sum_probs=41.9
Q ss_pred CcCEEEEEEccCCCEEE-EeCCC--CcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecC-CC--cEEEEeCCCC
Q psy16880 13 NSAVRSISFCSKQHTLI-SGGDD--GSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGD-DG--SICMWNLNSK 80 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~-~~~~~--~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~-~~--~i~~~~~~~~ 80 (84)
.+.....+|+|+++.++ +...+ ..+.++|+..+.. ........|+|+++.++..+. .+ .|.+.++.++
T Consensus 232 ~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g 311 (419)
T PRK04043 232 QGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSG 311 (419)
T ss_pred CCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 44455678999997654 33333 4566667655543 222345679999987765543 33 4666677655
Q ss_pred e
Q psy16880 81 L 81 (84)
Q Consensus 81 ~ 81 (84)
+
T Consensus 312 ~ 312 (419)
T PRK04043 312 S 312 (419)
T ss_pred C
Confidence 4
No 330
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=95.02 E-value=0.11 Score=29.81 Aligned_cols=48 Identities=6% Similarity=0.198 Sum_probs=35.1
Q ss_pred CCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 34 DGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 34 ~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
.+.+.++|+.+... ...+....|+|+++.++.+. ++.|.+++..++..
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~ 75 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQE 75 (353)
T ss_dssp EEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEE
T ss_pred ceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCe
Confidence 34677888887654 35688899999999888885 67788888766543
No 331
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=94.82 E-value=0.31 Score=26.43 Aligned_cols=65 Identities=15% Similarity=0.230 Sum_probs=47.6
Q ss_pred cCEEEEEEccCCCEEE-EeCCCCcEEEEeCCCCCC--------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy16880 14 SAVRSISFCSKQHTLI-SGGDDGSICMWNLNSKLC--------------DSAVRSISFCSKQRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~-~~~~~~~~~~~d~~~~~~--------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (84)
.....|+|+|+++.|. +-+..+.+..+++..... .+....+++..++++.++.-..+.|.+++..
T Consensus 134 ~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~ 213 (246)
T PF08450_consen 134 GFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD 213 (246)
T ss_dssp SSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT
T ss_pred ccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC
Confidence 4457899999998664 667777888888853221 2247889999999877776677889999887
No 332
>KOG0882|consensus
Probab=94.66 E-value=0.29 Score=29.51 Aligned_cols=35 Identities=9% Similarity=0.096 Sum_probs=30.4
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC 47 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~ 47 (84)
+....++.++|++..+.+-+.|..+++++..++..
T Consensus 201 Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGkl 235 (558)
T KOG0882|consen 201 KTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKL 235 (558)
T ss_pred ccCccceEEccccCcccccCcccEEEEEEeccchh
Confidence 45667899999999999999999999999887755
No 333
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=94.52 E-value=0.15 Score=27.55 Aligned_cols=21 Identities=24% Similarity=0.514 Sum_probs=13.3
Q ss_pred CCCEEEEeCCCCcEEEEeCCC
Q psy16880 24 KQHTLISGGDDGSICMWNLNS 44 (84)
Q Consensus 24 ~~~~l~~~~~~~~~~~~d~~~ 44 (84)
.+.++++-..+|.+.+||+..
T Consensus 21 ~~~~Ll~iT~~G~l~vWnl~~ 41 (219)
T PF07569_consen 21 NGSYLLAITSSGLLYVWNLKK 41 (219)
T ss_pred CCCEEEEEeCCCeEEEEECCC
Confidence 455666666666666666653
No 334
>KOG1645|consensus
Probab=94.47 E-value=0.23 Score=29.46 Aligned_cols=34 Identities=12% Similarity=0.305 Sum_probs=28.6
Q ss_pred cCEEEEEEccCC-CEEEEeCCCCcEEEEeCCCCCC
Q psy16880 14 SAVRSISFCSKQ-HTLISGGDDGSICMWNLNSKLC 47 (84)
Q Consensus 14 ~~v~~~~~~~~~-~~l~~~~~~~~~~~~d~~~~~~ 47 (84)
..+++++|+.+. ..+.+|..+|.|.+||++....
T Consensus 236 ~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~ 270 (463)
T KOG1645|consen 236 NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPEG 270 (463)
T ss_pred CCceeeeeccCCcceeEEeccCceEEEEEccCCCc
Confidence 678899999865 5778899999999999987655
No 335
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=94.40 E-value=0.33 Score=25.89 Aligned_cols=58 Identities=10% Similarity=0.198 Sum_probs=36.7
Q ss_pred CCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 24 KQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 24 ~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
++..++.+..++.+..||..++.. +..+...... .+..++.+..++.+..+|..+++.
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~v~v~~~~~~l~~~d~~tG~~ 98 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVV-DGGRVYVGTSDGSLYALDAKTGKV 98 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEE-ETTEEEEEETTSEEEEEETTTSCE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeee-cccccccccceeeeEecccCCcce
Confidence 456666678889999999977665 1211111111 234556666777888888887765
No 336
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=94.26 E-value=0.57 Score=27.08 Aligned_cols=58 Identities=12% Similarity=0.157 Sum_probs=36.5
Q ss_pred CCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 24 KQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 24 ~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
++..++.++.++.+..+|..++.. ...+...... .+..++.++.++.+..+|.++++.
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~ 167 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPLV-ANGLVVVRTNDGRLTALDAATGER 167 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCEE-ECCEEEEECCCCeEEEEEcCCCce
Confidence 456677778888888889876655 2222111111 234566667788899998887654
No 337
>KOG0309|consensus
Probab=94.24 E-value=0.064 Score=34.11 Aligned_cols=66 Identities=23% Similarity=0.518 Sum_probs=44.1
Q ss_pred cCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----CC---CEEEEEEcc-CCCEEEEecCCCcEEEEeCCC
Q psy16880 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----DS---AVRSISFCS-KQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----~~---~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~~ 79 (84)
.....++|+.....+++.+....+.+||.+.+.. .. .+..+.|.. ....+.+++.|++++.|+...
T Consensus 159 s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~k 233 (1081)
T KOG0309|consen 159 SAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSK 233 (1081)
T ss_pred ccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccc
Confidence 4456788887555555566677899999987654 22 344444433 223567788899999998753
No 338
>KOG2114|consensus
Probab=93.88 E-value=1.1 Score=29.20 Aligned_cols=67 Identities=10% Similarity=0.232 Sum_probs=49.7
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
..++.+++.+.+-..++.|-.+|.|..+.-+...- +.+|+++.+..++..++-+.....+.+|.+.+
T Consensus 125 ~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~g 202 (933)
T KOG2114|consen 125 PSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSG 202 (933)
T ss_pred CCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecC
Confidence 56788999999999999999999998864332111 67899999987776644444566788887764
No 339
>KOG3621|consensus
Probab=93.87 E-value=0.46 Score=30.06 Aligned_cols=67 Identities=18% Similarity=0.275 Sum_probs=51.2
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
...|.--++.....+++.|+..|.+.+|.-..+.. .+.+...+.++...+++.++..+.|.++.+..
T Consensus 33 ~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~ 107 (726)
T KOG3621|consen 33 PARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNK 107 (726)
T ss_pred cceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhc
Confidence 44555556677889999999999999998765544 33466677788888888888889998886654
No 340
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=93.81 E-value=0.8 Score=27.18 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=26.7
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
.+.|++++.+ +--.++.+..+|.+.+.|++....+
T Consensus 86 ~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI 120 (395)
T PF08596_consen 86 QGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVI 120 (395)
T ss_dssp S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEE
Confidence 5788999886 4457888888999999999877654
No 341
>KOG2444|consensus
Probab=93.77 E-value=0.61 Score=25.66 Aligned_cols=19 Identities=32% Similarity=0.669 Sum_probs=11.6
Q ss_pred CCEEEEeCCCCcEEEEeCC
Q psy16880 25 QHTLISGGDDGSICMWNLN 43 (84)
Q Consensus 25 ~~~l~~~~~~~~~~~~d~~ 43 (84)
+..++.|..++.+.+|..+
T Consensus 70 ~~~~~vG~~dg~v~~~n~n 88 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWN 88 (238)
T ss_pred CceEEeecccceEEEecCC
Confidence 4456666666666666554
No 342
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=93.35 E-value=0.7 Score=25.08 Aligned_cols=22 Identities=23% Similarity=0.430 Sum_probs=10.5
Q ss_pred CCEEEEecCCCcEEEEeCCCCe
Q psy16880 60 QRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 60 ~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
+.++++...+|.+++||+.+++
T Consensus 22 ~~~Ll~iT~~G~l~vWnl~~~k 43 (219)
T PF07569_consen 22 GSYLLAITSSGLLYVWNLKKGK 43 (219)
T ss_pred CCEEEEEeCCCeEEEEECCCCe
Confidence 3344444445555555554444
No 343
>PRK02888 nitrous-oxide reductase; Validated
Probab=93.32 E-value=1.3 Score=28.04 Aligned_cols=48 Identities=4% Similarity=0.053 Sum_probs=36.9
Q ss_pred CCcEEEEeCCC-----CCC------CCCEEEEEEccCCCEEEEec-CCCcEEEEeCCCCe
Q psy16880 34 DGSICMWNLNS-----KLC------DSAVRSISFCSKQRTLISGG-DDGSICMWNLNSKL 81 (84)
Q Consensus 34 ~~~~~~~d~~~-----~~~------~~~v~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~ 81 (84)
+..|.+.|..+ ... .....++.++|+++++++.+ .+..+.+.|+.+.+
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k 354 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLD 354 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhh
Confidence 35688888877 222 67889999999999887655 47899999987654
No 344
>KOG4460|consensus
Probab=93.29 E-value=1.2 Score=27.74 Aligned_cols=66 Identities=12% Similarity=0.129 Sum_probs=44.5
Q ss_pred CEEEEEEccCCCEEEEeCCCCcEEEEeCC---------CCCC------------------CCCEEEEEEccCC---CEEE
Q psy16880 15 AVRSISFCSKQHTLISGGDDGSICMWNLN---------SKLC------------------DSAVRSISFCSKQ---RTLI 64 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~~~~~~~~~~~~d~~---------~~~~------------------~~~v~~~~~~~~~---~~~~ 64 (84)
.|..+..++.|+.++-.+.+|.+.++-.+ .++. .-.+...+|+|+. ..+.
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~ 184 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV 184 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence 35677788899988888888877765421 1111 1135667899876 4455
Q ss_pred EecCCCcEEEEeCCCC
Q psy16880 65 SGGDDGSICMWNLNSK 80 (84)
Q Consensus 65 ~~~~~~~i~~~~~~~~ 80 (84)
.-+.|+.|++|++...
T Consensus 185 iL~sdnviRiy~lS~~ 200 (741)
T KOG4460|consen 185 LLTSDNVIRIYSLSEP 200 (741)
T ss_pred EEecCcEEEEEecCCc
Confidence 5567999999998654
No 345
>KOG2395|consensus
Probab=92.77 E-value=0.8 Score=28.40 Aligned_cols=51 Identities=8% Similarity=0.243 Sum_probs=37.3
Q ss_pred CCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 25 QHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 25 ~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
...++.|+.+|.+++||-..... ...|.++..+.+|++++.-+. ..+.+-+
T Consensus 441 sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~-tyLlLi~ 498 (644)
T KOG2395|consen 441 SGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCK-TYLLLID 498 (644)
T ss_pred CceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecc-cEEEEEE
Confidence 45788899999999999732222 778999999999998876654 3344433
No 346
>KOG1920|consensus
Probab=92.44 E-value=2 Score=29.26 Aligned_cols=65 Identities=14% Similarity=0.245 Sum_probs=46.1
Q ss_pred EEEEEEccCCCEEEEe---CCCCcEEEEeCCCCCC----------CCCEEEEEEccCCCEEEE---ecCCCcEEEEeCCC
Q psy16880 16 VRSISFCSKQHTLISG---GDDGSICMWNLNSKLC----------DSAVRSISFCSKQRTLIS---GGDDGSICMWNLNS 79 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~---~~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~~~~~~---~~~~~~i~~~~~~~ 79 (84)
=.+++|-|.|..+++. ..+..|.+|.-+.... +..+..++|..++..++. ......+.+|-..+
T Consensus 244 ~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~N 323 (1265)
T KOG1920|consen 244 QHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGN 323 (1265)
T ss_pred ccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecC
Confidence 3588999999888766 3344677887654433 345899999999988876 33344599997655
Q ss_pred C
Q psy16880 80 K 80 (84)
Q Consensus 80 ~ 80 (84)
.
T Consensus 324 y 324 (1265)
T KOG1920|consen 324 Y 324 (1265)
T ss_pred e
Confidence 3
No 347
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=92.38 E-value=1.3 Score=25.48 Aligned_cols=73 Identities=10% Similarity=0.143 Sum_probs=40.0
Q ss_pred EEEeccCCCcCEEEEEEccCCCEEEEe-CCCCcEEEEeCCC--CCC------------CCCEEEEEEccCCCEEEEecCC
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQHTLISG-GDDGSICMWNLNS--KLC------------DSAVRSISFCSKQRTLISGGDD 69 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~~~~~d~~~--~~~------------~~~v~~~~~~~~~~~~~~~~~~ 69 (84)
++.+..+ -..-+.|+|+|+++.+..+ +..+.+.-|++.. ... .+..-.++...++.+..+....
T Consensus 155 ~~l~~~~-~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~ 233 (307)
T COG3386 155 VRLLDDD-LTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWG 233 (307)
T ss_pred EEeecCc-EEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccC
Confidence 3333333 3445789999999776655 4446676666652 111 2333344444455544333333
Q ss_pred C-cEEEEeCC
Q psy16880 70 G-SICMWNLN 78 (84)
Q Consensus 70 ~-~i~~~~~~ 78 (84)
+ .+.+|++.
T Consensus 234 g~~v~~~~pd 243 (307)
T COG3386 234 GGRVVRFNPD 243 (307)
T ss_pred CceEEEECCC
Confidence 2 67777766
No 348
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=92.33 E-value=1.9 Score=27.39 Aligned_cols=63 Identities=6% Similarity=0.206 Sum_probs=44.4
Q ss_pred CcCEEEEEEcc--CCCEEEEeCCCCcEEEEeCC-----CCCC--------------CCCEEEEEEccCCCEEEEecCCCc
Q psy16880 13 NSAVRSISFCS--KQHTLISGGDDGSICMWNLN-----SKLC--------------DSAVRSISFCSKQRTLISGGDDGS 71 (84)
Q Consensus 13 ~~~v~~~~~~~--~~~~l~~~~~~~~~~~~d~~-----~~~~--------------~~~v~~~~~~~~~~~~~~~~~~~~ 71 (84)
.+.|..++|.. +++.+++.+....+.++-.. ...+ ..+|....|.++|..++.. ++.
T Consensus 72 ~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNq 149 (631)
T PF12234_consen 72 DDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQ 149 (631)
T ss_pred CCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCE
Confidence 57889999976 77888888888888877432 1111 5678889999888655443 467
Q ss_pred EEEEeC
Q psy16880 72 ICMWNL 77 (84)
Q Consensus 72 i~~~~~ 77 (84)
+.+++-
T Consensus 150 lfv~dk 155 (631)
T PF12234_consen 150 LFVFDK 155 (631)
T ss_pred EEEECC
Confidence 777753
No 349
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=92.23 E-value=1.4 Score=25.73 Aligned_cols=67 Identities=13% Similarity=0.224 Sum_probs=48.8
Q ss_pred CcCEEEEEEccCCCEEEEeCC---CCcEEEEeCCCC--CC---------CCCEEEEEEccCCCEEEEecC-CCcEEEEeC
Q psy16880 13 NSAVRSISFCSKQHTLISGGD---DGSICMWNLNSK--LC---------DSAVRSISFCSKQRTLISGGD-DGSICMWNL 77 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~---~~~~~~~d~~~~--~~---------~~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~ 77 (84)
.+...-|+++|+++.|.++.. .+.+..|.++.. .. ....+.++++++++.++++.. .+.|.++-+
T Consensus 39 ~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~ 118 (346)
T COG2706 39 LGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPL 118 (346)
T ss_pred cCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEc
Confidence 455678899999988887754 467777766642 22 445589999999998887765 578888876
Q ss_pred CC
Q psy16880 78 NS 79 (84)
Q Consensus 78 ~~ 79 (84)
+.
T Consensus 119 ~~ 120 (346)
T COG2706 119 QA 120 (346)
T ss_pred cc
Confidence 54
No 350
>KOG1008|consensus
Probab=92.04 E-value=0.39 Score=30.27 Aligned_cols=63 Identities=17% Similarity=0.408 Sum_probs=40.9
Q ss_pred CEEEEEEcc-CCCEEEEeCCCCcEEEEe-CCCCCC------------CCCEEEEEEccCCCEEEE-ec-CCCcEEEEeCC
Q psy16880 15 AVRSISFCS-KQHTLISGGDDGSICMWN-LNSKLC------------DSAVRSISFCSKQRTLIS-GG-DDGSICMWNLN 78 (84)
Q Consensus 15 ~v~~~~~~~-~~~~l~~~~~~~~~~~~d-~~~~~~------------~~~v~~~~~~~~~~~~~~-~~-~~~~i~~~~~~ 78 (84)
.+..+.+.| .+.++++-. ++.+.+|| .+.-.. ..++..++|+|..+-++. .. ..++|+++++.
T Consensus 197 ~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 197 YVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred hcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 455566777 667776655 99999999 332211 346999999996654433 33 34678888764
No 351
>KOG2395|consensus
Probab=91.52 E-value=2.3 Score=26.61 Aligned_cols=73 Identities=12% Similarity=0.248 Sum_probs=44.0
Q ss_pred CceEEEeccCCCcCEEEEEEccCCC--EE-----EEeCCCCcEEEEeCCCCCC-------------CCCEEEEEEccCCC
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQH--TL-----ISGGDDGSICMWNLNSKLC-------------DSAVRSISFCSKQR 61 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~--~l-----~~~~~~~~~~~~d~~~~~~-------------~~~v~~~~~~~~~~ 61 (84)
|+.+.+-.-+ .. |.-+.+.|+.. .+ +.|-.+..+.-||.+.... .....|++-..+|
T Consensus 366 GKIVeEWk~~-~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~sG- 442 (644)
T KOG2395|consen 366 GKIVEEWKFE-DD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTESG- 442 (644)
T ss_pred ceeeeEeecc-CC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccceeeecCCc-
Confidence 4444444443 22 55556666442 22 3455666777788874332 3345555555555
Q ss_pred EEEEecCCCcEEEEeC
Q psy16880 62 TLISGGDDGSICMWNL 77 (84)
Q Consensus 62 ~~~~~~~~~~i~~~~~ 77 (84)
.++.++.+|.|++||-
T Consensus 443 ~IvvgS~~GdIRLYdr 458 (644)
T KOG2395|consen 443 YIVVGSLKGDIRLYDR 458 (644)
T ss_pred eEEEeecCCcEEeehh
Confidence 5888999999999975
No 352
>KOG1008|consensus
Probab=91.48 E-value=0.078 Score=33.09 Aligned_cols=60 Identities=18% Similarity=0.410 Sum_probs=45.4
Q ss_pred EEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEcc-CCCEEEEecCCCcEEEEe
Q psy16880 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCS-KQRTLISGGDDGSICMWN 76 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~ 76 (84)
..+++|..+.+++++|.....+.++|++.... ...+.++...| ...+++ ...++.|.+||
T Consensus 157 qns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~c-s~~dg~iAiwD 223 (783)
T KOG1008|consen 157 QNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFC-SNSDGDIAIWD 223 (783)
T ss_pred ccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCcee-ccccCceeecc
Confidence 34778888889999999999999999974333 44677788888 444444 44599999999
No 353
>KOG1912|consensus
Probab=91.43 E-value=0.26 Score=31.76 Aligned_cols=77 Identities=18% Similarity=0.276 Sum_probs=54.3
Q ss_pred EEEeccCCCcCEEEEEEccCCCEEEEe---------CCCCcEEEEeCCCCCC----------CCCEEEEEEccCCCEEEE
Q psy16880 5 IHTFVHSNNSAVRSISFCSKQHTLISG---------GDDGSICMWNLNSKLC----------DSAVRSISFCSKQRTLIS 65 (84)
Q Consensus 5 ~~~~~~~~~~~v~~~~~~~~~~~l~~~---------~~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~~~~~~ 65 (84)
.+.+..| .+.|.++.|.-..+++..+ +....+.+=|++++.. +.+|..+..+..+++++.
T Consensus 460 ~~~fsvh-t~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~~irvS~~~~yLai 538 (1062)
T KOG1912|consen 460 AASFSVH-TSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIRAIRVSSSGRYLAI 538 (1062)
T ss_pred hhhhccc-ccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCCcCcceeeeecccCceEEE
Confidence 3445567 8888999987655544332 2223455667776643 678999999988999998
Q ss_pred ecCCCcEEEEeCCCCee
Q psy16880 66 GGDDGSICMWNLNSKLC 82 (84)
Q Consensus 66 ~~~~~~i~~~~~~~~~~ 82 (84)
.-++..+-+||+++..+
T Consensus 539 ~Fr~~plEiwd~kt~~~ 555 (1062)
T KOG1912|consen 539 LFRREPLEIWDLKTLRM 555 (1062)
T ss_pred EecccchHHHhhccchH
Confidence 88899999999876543
No 354
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=91.16 E-value=1.9 Score=25.02 Aligned_cols=57 Identities=12% Similarity=0.101 Sum_probs=35.4
Q ss_pred CCEEEEeCCCCcEEEEeCCCCCC--CC------CEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 25 QHTLISGGDDGSICMWNLNSKLC--DS------AVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 25 ~~~l~~~~~~~~~~~~d~~~~~~--~~------~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
+..+..+..++.+..+|..++.. +. ....... .+..++.++.++.+.++|..+++.+
T Consensus 279 ~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~ 343 (377)
T TIGR03300 279 DNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFV 343 (377)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence 45566667777888888765543 11 1111111 2456778888999999998877653
No 355
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=90.79 E-value=1.4 Score=22.90 Aligned_cols=29 Identities=14% Similarity=0.188 Sum_probs=22.7
Q ss_pred CEEEEEEccCC------CEEEEecCCCcEEEEeCC
Q psy16880 50 AVRSISFCSKQ------RTLISGGDDGSICMWNLN 78 (84)
Q Consensus 50 ~v~~~~~~~~~------~~~~~~~~~~~i~~~~~~ 78 (84)
.+..++|+|.| ..+++...++.+.+|...
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 78899999954 355666778999999765
No 356
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=90.65 E-value=1.7 Score=23.62 Aligned_cols=65 Identities=14% Similarity=0.216 Sum_probs=42.6
Q ss_pred CcCEEEEEEccCCCEEEEeCCC--------CcEEEEeCCCCCC------CCCEEEEEEccCCCEEE-EecCCCcEEEEeC
Q psy16880 13 NSAVRSISFCSKQHTLISGGDD--------GSICMWNLNSKLC------DSAVRSISFCSKQRTLI-SGGDDGSICMWNL 77 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~--------~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~-~~~~~~~i~~~~~ 77 (84)
......+++.++|.+.++-... +.+..++.. ... -.....++|+|+++.+. +-+..+.|..+++
T Consensus 85 ~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~ 163 (246)
T PF08450_consen 85 FNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDL 163 (246)
T ss_dssp TEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEE
T ss_pred cCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecccccceeEEEec
Confidence 4567889999999977765433 335445554 222 34578999999998665 5566777888876
Q ss_pred C
Q psy16880 78 N 78 (84)
Q Consensus 78 ~ 78 (84)
.
T Consensus 164 ~ 164 (246)
T PF08450_consen 164 D 164 (246)
T ss_dssp E
T ss_pred c
Confidence 4
No 357
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=90.35 E-value=3.5 Score=26.77 Aligned_cols=67 Identities=12% Similarity=0.323 Sum_probs=43.4
Q ss_pred cCEEEEEEcc-CCCEEEEeCCCCcEEEEeCCCCCC------------CCCE----------EEEEEccCCCEEEEecCCC
Q psy16880 14 SAVRSISFCS-KQHTLISGGDDGSICMWNLNSKLC------------DSAV----------RSISFCSKQRTLISGGDDG 70 (84)
Q Consensus 14 ~~v~~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~------------~~~v----------~~~~~~~~~~~~~~~~~~~ 70 (84)
.+...++|+| +...|+.....|...+||+..... .+.+ ..+.|.++...++.+. ..
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~-r~ 224 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCN-RS 224 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEc-CC
Confidence 4677899999 567899999999999999922111 1112 2556666655555554 34
Q ss_pred cEEEEeCCCCe
Q psy16880 71 SICMWNLNSKL 81 (84)
Q Consensus 71 ~i~~~~~~~~~ 81 (84)
.+.++|+.+..
T Consensus 225 ~l~~~d~~~~~ 235 (765)
T PF10214_consen 225 KLMLIDFESNW 235 (765)
T ss_pred ceEEEECCCCC
Confidence 46667766543
No 358
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=90.35 E-value=2.6 Score=25.37 Aligned_cols=64 Identities=20% Similarity=0.303 Sum_probs=37.9
Q ss_pred EEEEEccCCCEEE-EeCCCCcEEEE--eCCCCCC------CCCEEEEEEccCCCEEEEec-CCCc--EEEEeCCCC
Q psy16880 17 RSISFCSKQHTLI-SGGDDGSICMW--NLNSKLC------DSAVRSISFCSKQRTLISGG-DDGS--ICMWNLNSK 80 (84)
Q Consensus 17 ~~~~~~~~~~~l~-~~~~~~~~~~~--d~~~~~~------~~~v~~~~~~~~~~~~~~~~-~~~~--i~~~~~~~~ 80 (84)
..-+|+|+|+.++ +...++...+| |+..... .+.-..=.|+|+|+.++-.+ ..|. |.+.+...+
T Consensus 241 ~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~ 316 (425)
T COG0823 241 GAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGS 316 (425)
T ss_pred CCccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCC
Confidence 3457899997664 55666655555 5544333 23334667899998887554 3444 555555544
No 359
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=90.34 E-value=1.7 Score=26.35 Aligned_cols=50 Identities=20% Similarity=0.272 Sum_probs=29.8
Q ss_pred CCEEEEeCCCCcEEEEeCCCCCC----C-CCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 25 QHTLISGGDDGSICMWNLNSKLC----D-SAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 25 ~~~l~~~~~~~~~~~~d~~~~~~----~-~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
|.+|...+.+ .+.+||..+... . ..|..+-|++++.+++..+. ..+.+++
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~vk~V~Ws~~g~~val~t~-~~i~il~ 171 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRRIDVSAVKYVIWSDDGELVALVTK-DSIYILK 171 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEEESS-E-EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeEEecCCCcEEEEECCCCEEEEEeC-CeEEEEE
Confidence 6666555444 789999987766 2 23788999999988887764 4566654
No 360
>KOG3616|consensus
Probab=90.33 E-value=2.6 Score=27.81 Aligned_cols=61 Identities=16% Similarity=0.335 Sum_probs=40.2
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
...+.++.-+|.+..++.+..|+++.+|+...... ..+-..+.|...| +++...|....-|
T Consensus 14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~~nlv~tnhg--l~~~tsdrr~la~ 80 (1636)
T KOG3616|consen 14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEEAKPKENLVFTNHG--LVTATSDRRALAW 80 (1636)
T ss_pred cceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhhcCCccceeeeccc--eEEEeccchhhee
Confidence 45567888899999999999999999988754432 2233334444333 4455555555555
No 361
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=90.29 E-value=2 Score=23.92 Aligned_cols=77 Identities=9% Similarity=0.282 Sum_probs=46.9
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC------------------CCCEEEEEEccCCCEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC------------------DSAVRSISFCSKQRTL 63 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~------------------~~~v~~~~~~~~~~~~ 63 (84)
|+.++.+.-...+....+++..++.++++.-.++.+.++++..... +..+-+++|.|....+
T Consensus 53 G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L 132 (248)
T PF06977_consen 53 GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRL 132 (248)
T ss_dssp --EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEE
Confidence 5666666544245678888887777777776788888877732211 3458899999987777
Q ss_pred EEecCCCcEEEEeCC
Q psy16880 64 ISGGDDGSICMWNLN 78 (84)
Q Consensus 64 ~~~~~~~~i~~~~~~ 78 (84)
+.+-......++..+
T Consensus 133 ~v~kE~~P~~l~~~~ 147 (248)
T PF06977_consen 133 FVAKERKPKRLYEVN 147 (248)
T ss_dssp EEEEESSSEEEEEEE
T ss_pred EEEeCCCChhhEEEc
Confidence 777666666666543
No 362
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=90.08 E-value=2.4 Score=24.46 Aligned_cols=53 Identities=13% Similarity=0.218 Sum_probs=37.3
Q ss_pred cCEEEEEEccCCCEEE-EeCCCCcEEEEeCCCCCC-----CCCEEEEEEccCCCEEEEec
Q psy16880 14 SAVRSISFCSKQHTLI-SGGDDGSICMWNLNSKLC-----DSAVRSISFCSKQRTLISGG 67 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~-~~~~~~~~~~~d~~~~~~-----~~~v~~~~~~~~~~~~~~~~ 67 (84)
+-+-+|++++++..++ ++-..+.+.+||..++.. -..++.++-.+++ ++++.+
T Consensus 217 ~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~D~cGva~~~~~-f~~ssG 275 (305)
T PF07433_consen 217 GYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLPDACGVAPTDDG-FLVSSG 275 (305)
T ss_pred CceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccCceeeeeecCCc-eEEeCC
Confidence 5688999999988765 445556888999987766 3456777766666 444443
No 363
>KOG2377|consensus
Probab=89.98 E-value=3.1 Score=25.69 Aligned_cols=30 Identities=17% Similarity=0.320 Sum_probs=27.2
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
++.|..+.|+++.+.++.--.++++.+++.
T Consensus 66 ~G~I~SIkFSlDnkilAVQR~~~~v~f~nf 95 (657)
T KOG2377|consen 66 KGEIKSIKFSLDNKILAVQRTSKTVDFCNF 95 (657)
T ss_pred CCceeEEEeccCcceEEEEecCceEEEEec
Confidence 779999999999999999888999998876
No 364
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=89.58 E-value=1.4 Score=26.99 Aligned_cols=34 Identities=24% Similarity=0.487 Sum_probs=24.0
Q ss_pred cCEEEEEEcc----CCCEEEEeCCCCcEEEEeCCCCCC
Q psy16880 14 SAVRSISFCS----KQHTLISGGDDGSICMWNLNSKLC 47 (84)
Q Consensus 14 ~~v~~~~~~~----~~~~l~~~~~~~~~~~~d~~~~~~ 47 (84)
+.+..++.+. +..++++-+.|+.+++||+.+...
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~ 252 (547)
T PF11715_consen 215 SVAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQC 252 (547)
T ss_dssp --EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCE
T ss_pred CccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeE
Confidence 3455566665 667899999999999999986543
No 365
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=89.37 E-value=1.9 Score=25.90 Aligned_cols=36 Identities=11% Similarity=0.118 Sum_probs=29.4
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
...+..++.+|.+++.++...-|.|.++|+.++..+
T Consensus 307 ~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vv 342 (415)
T PF14655_consen 307 KREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVV 342 (415)
T ss_pred CceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhh
Confidence 456788999999988888777789999999877654
No 366
>KOG3630|consensus
Probab=89.23 E-value=3.7 Score=28.15 Aligned_cols=51 Identities=16% Similarity=0.323 Sum_probs=38.3
Q ss_pred cCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----------CCCEEEEEEccCCCEEE
Q psy16880 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----------DSAVRSISFCSKQRTLI 64 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----------~~~v~~~~~~~~~~~~~ 64 (84)
....+++|+|.|..++.|...|.+.-|...-... ...|.+++|.....+++
T Consensus 199 ~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflv 259 (1405)
T KOG3630|consen 199 NSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFLV 259 (1405)
T ss_pred cceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEEE
Confidence 4578999999999999999999988775432211 46789999986655544
No 367
>KOG2444|consensus
Probab=89.00 E-value=2.6 Score=23.36 Aligned_cols=54 Identities=22% Similarity=0.199 Sum_probs=32.4
Q ss_pred CCCEEEEeCCCCcEEEEeCCCCCCCCCEEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy16880 24 KQHTLISGGDDGSICMWNLNSKLCDSAVRSISFCSKQRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 24 ~~~~l~~~~~~~~~~~~d~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (84)
++.+.+++..++.++.|.+...+....+..+-+.| +..+++.+.++.+.+|++.
T Consensus 113 ~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~-~e~~ivv~sd~~i~~a~~S 166 (238)
T KOG2444|consen 113 DSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFES-GEELIVVGSDEFLKIADTS 166 (238)
T ss_pred ccceeEEeccCCceeeeccccCceeeeeccccCCC-cceeEEecCCceEEeeccc
Confidence 44578889999999999887544322222233322 3445555556667666544
No 368
>KOG2377|consensus
Probab=88.74 E-value=4 Score=25.26 Aligned_cols=54 Identities=11% Similarity=0.164 Sum_probs=40.1
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----------CCCEEEEEEccCCCEEEEec
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----------DSAVRSISFCSKQRTLISGG 67 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----------~~~v~~~~~~~~~~~~~~~~ 67 (84)
.++|.+++|++|.+.++.-..+..+.++....... ...|.++.|..+ .-++...
T Consensus 66 ~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~ 130 (657)
T KOG2377|consen 66 KGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFIT 130 (657)
T ss_pred CCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEe
Confidence 57899999999999999999999998887643322 335888888765 3344444
No 369
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=88.52 E-value=3.8 Score=24.72 Aligned_cols=69 Identities=19% Similarity=0.203 Sum_probs=43.7
Q ss_pred CcCEEEEEEccCCCEEEEe---CCC-CcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEe-cCCCc--EEEEeCCC
Q psy16880 13 NSAVRSISFCSKQHTLISG---GDD-GSICMWNLNSKLC------DSAVRSISFCSKQRTLISG-GDDGS--ICMWNLNS 79 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~---~~~-~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~-~~~~~--i~~~~~~~ 79 (84)
...+..-+|+|++..++-- ... ..+.++|+..... ++.-..-+|+|+++.++.+ ..++. |.+.|+..
T Consensus 192 ~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~ 271 (425)
T COG0823 192 GSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDG 271 (425)
T ss_pred CcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCC
Confidence 3456666888887654322 222 4577788877655 4556678899999877654 44555 55556665
Q ss_pred Ce
Q psy16880 80 KL 81 (84)
Q Consensus 80 ~~ 81 (84)
+.
T Consensus 272 ~~ 273 (425)
T COG0823 272 KN 273 (425)
T ss_pred Cc
Confidence 43
No 370
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=88.37 E-value=2.9 Score=23.08 Aligned_cols=54 Identities=22% Similarity=0.421 Sum_probs=38.1
Q ss_pred CCCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 24 KQHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 24 ~~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
.++.++.|..+| +.+++...... ...|..+...|+-..++.-+ |+.+.++++..
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~ 65 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDS 65 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCccceeEeecceEEEEEEecccCEEEEEc-CCccEEEEchh
Confidence 577888888888 77777722222 34588888888777666654 58899988754
No 371
>PRK13616 lipoprotein LpqB; Provisional
Probab=88.35 E-value=4.7 Score=25.50 Aligned_cols=58 Identities=7% Similarity=0.084 Sum_probs=35.7
Q ss_pred EEEEEEccCCCEEEEeCCC------------CcEEEEeCCCCCC----CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 16 VRSISFCSKQHTLISGGDD------------GSICMWNLNSKLC----DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~~~~------------~~~~~~d~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
...-.|+|++..+.+.... +.+.+.++..... ...|..+.|+|+|..++... ++.+.+
T Consensus 399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 4566899987766555322 2333334332222 35799999999999887665 455555
No 372
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=87.07 E-value=3.7 Score=22.92 Aligned_cols=69 Identities=10% Similarity=0.208 Sum_probs=42.5
Q ss_pred EeccCCCcCEEEEEEccCCC-EEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 7 TFVHSNNSAVRSISFCSKQH-TLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 7 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
.+.+- ...+..++|+|+.. +++.....+.+.-.+.. +.. -...-++++..++.++++.-.++.+.++++
T Consensus 16 ~l~g~-~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~ 93 (248)
T PF06977_consen 16 PLPGI-LDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTI 93 (248)
T ss_dssp E-TT---S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred ECCCc-cCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence 44555 56699999999755 66666777777666654 222 245677888777766666656777777765
No 373
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=87.02 E-value=4.5 Score=23.86 Aligned_cols=50 Identities=12% Similarity=0.232 Sum_probs=33.0
Q ss_pred EEEEccCCCEEEEe-CCC----CcEEEEeCCCCCC-----CCC-EEEEEEccCCCEEEEec
Q psy16880 18 SISFCSKQHTLISG-GDD----GSICMWNLNSKLC-----DSA-VRSISFCSKQRTLISGG 67 (84)
Q Consensus 18 ~~~~~~~~~~l~~~-~~~----~~~~~~d~~~~~~-----~~~-v~~~~~~~~~~~~~~~~ 67 (84)
.++++|++++++-+ +.. ..+.++|+.++.. ... ...+.|.+++..++...
T Consensus 128 ~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~ 188 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTR 188 (414)
T ss_dssp EEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEE
T ss_pred eeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEE
Confidence 56889999987644 222 3588899987755 111 12389999987765543
No 374
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=86.99 E-value=4 Score=23.25 Aligned_cols=49 Identities=10% Similarity=0.445 Sum_probs=31.2
Q ss_pred CCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEec------CCCcEEEEeCCCCe
Q psy16880 33 DDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGG------DDGSICMWNLNSKL 81 (84)
Q Consensus 33 ~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~ 81 (84)
....+++||....+- .+.|..+.|..+...++.|. ....+..||..+..
T Consensus 14 ~C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~ 75 (281)
T PF12768_consen 14 PCPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT 75 (281)
T ss_pred CCCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe
Confidence 355788888765433 66788899876555555543 23457777766543
No 375
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=86.96 E-value=2.4 Score=24.86 Aligned_cols=36 Identities=14% Similarity=0.274 Sum_probs=24.4
Q ss_pred CCCEEEEEEccCCC-EEEEe-cCCCcEEEEeCCCCeec
Q psy16880 48 DSAVRSISFCSKQR-TLISG-GDDGSICMWNLNSKLCD 83 (84)
Q Consensus 48 ~~~v~~~~~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~ 83 (84)
+..+.+++.+.+.+ .+... ..++.+.+||..+++.+
T Consensus 288 ~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~ 325 (342)
T PF06433_consen 288 EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLV 325 (342)
T ss_dssp EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EE
T ss_pred CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEE
Confidence 45677888887654 44443 45788999999998865
No 376
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.50 E-value=4.6 Score=23.39 Aligned_cols=77 Identities=12% Similarity=0.304 Sum_probs=50.8
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-----------------CCCEEEEEEccCCCEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-----------------DSAVRSISFCSKQRTLI 64 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-----------------~~~v~~~~~~~~~~~~~ 64 (84)
|+.++++.-..-+....+.|..++.+.++--.++.+.++.+..... +...-+++|.|..+.+.
T Consensus 117 GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~ 196 (316)
T COG3204 117 GDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLF 196 (316)
T ss_pred CceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEE
Confidence 5666666443234446677777777777777777777665543321 34577899999888787
Q ss_pred EecCCCcEEEEeCC
Q psy16880 65 SGGDDGSICMWNLN 78 (84)
Q Consensus 65 ~~~~~~~i~~~~~~ 78 (84)
..-..+.+.+|...
T Consensus 197 ~aKEr~P~~I~~~~ 210 (316)
T COG3204 197 VAKERNPIGIFEVT 210 (316)
T ss_pred EEEccCCcEEEEEe
Confidence 77777777777554
No 377
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=86.49 E-value=5.1 Score=23.99 Aligned_cols=47 Identities=11% Similarity=0.215 Sum_probs=31.4
Q ss_pred cCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCC
Q psy16880 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQ 60 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~ 60 (84)
+++..|+.+|+++.++.-..++.+.+....-... ......+.|+.+.
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~d 271 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGND 271 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCC
Confidence 5788999999999888777788877665433222 2345566665543
No 378
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=86.21 E-value=1.3 Score=16.69 Aligned_cols=16 Identities=6% Similarity=0.030 Sum_probs=8.7
Q ss_pred cCEEEEEEccCCCEEE
Q psy16880 14 SAVRSISFCSKQHTLI 29 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~ 29 (84)
+......|+|+|+.++
T Consensus 9 ~~~~~p~~SpDGk~i~ 24 (39)
T PF07676_consen 9 GDDGSPAWSPDGKYIY 24 (39)
T ss_dssp SSEEEEEE-TTSSEEE
T ss_pred ccccCEEEecCCCEEE
Confidence 3445566777776554
No 379
>KOG1832|consensus
Probab=85.88 E-value=0.37 Score=31.81 Aligned_cols=80 Identities=13% Similarity=0.177 Sum_probs=49.6
Q ss_pred CceEEEeccCCCcCEEEEEEccCCCEEEEeCCCC--cEEEEeCCCCCC----CCCEEEEEEccCCCEEEEecCCCcEEEE
Q psy16880 2 GSIIHTFVHSNNSAVRSISFCSKQHTLISGGDDG--SICMWNLNSKLC----DSAVRSISFCSKQRTLISGGDDGSICMW 75 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~~~~~d~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~i~~~ 75 (84)
|.....+..| .+.|.-+.-+.+|..+++.+... ...+|++..... -..-.++.|+.....-+.|+......+|
T Consensus 1133 G~~e~s~ncH-~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~Y 1211 (1516)
T KOG1832|consen 1133 GSMEESVNCH-QSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHSFDEDKAVKFSNSLQFRALGTEADDALLY 1211 (1516)
T ss_pred cccccccccc-ccccccccccCCcceeeeeccccCchHHHhccccccCccccccccceeehhhhHHHHHhcccccceEEE
Confidence 4444455566 78888777777887666554433 456899865322 2344667777554434455555678899
Q ss_pred eCCCCee
Q psy16880 76 NLNSKLC 82 (84)
Q Consensus 76 ~~~~~~~ 82 (84)
|+.++.+
T Consensus 1212 DvqT~~~ 1218 (1516)
T KOG1832|consen 1212 DVQTCSP 1218 (1516)
T ss_pred ecccCcH
Confidence 9887653
No 380
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=85.75 E-value=6.9 Score=24.74 Aligned_cols=54 Identities=9% Similarity=0.246 Sum_probs=39.4
Q ss_pred CCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy16880 24 KQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 24 ~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (84)
...+++.|+..|.+++||-..... ...|-.+..+.+|.++++-| ...+.+-|++
T Consensus 572 esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTC-k~yllL~d~~ 632 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATC-KNYLLLTDVP 632 (776)
T ss_pred cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEee-cceEEEEecc
Confidence 346889999999999999754433 56788888888998777665 3455555554
No 381
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=85.62 E-value=3.9 Score=21.81 Aligned_cols=55 Identities=18% Similarity=0.219 Sum_probs=34.4
Q ss_pred EEEEeCCCCc-EEEEeCCCCCC-----CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 27 TLISGGDDGS-ICMWNLNSKLC-----DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 27 ~l~~~~~~~~-~~~~d~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
.+.....++. +.+ |..++.. ...+... ....+..++..+.++.+..||+++++.+
T Consensus 175 ~v~~~~~~g~~~~~-d~~tg~~~w~~~~~~~~~~-~~~~~~~l~~~~~~~~l~~~d~~tG~~~ 235 (238)
T PF13360_consen 175 RVYVSSGDGRVVAV-DLATGEKLWSKPISGIYSL-PSVDGGTLYVTSSDGRLYALDLKTGKVV 235 (238)
T ss_dssp EEEEECCTSSEEEE-ETTTTEEEEEECSS-ECEC-EECCCTEEEEEETTTEEEEEETTTTEEE
T ss_pred EEEEEcCCCeEEEE-ECCCCCEEEEecCCCccCC-ceeeCCEEEEEeCCCEEEEEECCCCCEE
Confidence 5555665664 555 8876653 1222221 2345566777778999999999998853
No 382
>KOG1916|consensus
Probab=85.30 E-value=5.8 Score=26.78 Aligned_cols=64 Identities=20% Similarity=0.369 Sum_probs=41.6
Q ss_pred cCEEEEEEcc---CCCEEEEeCCCCcEEEEeCCCCCC-----------------CCCEEEEEEccCCCEEEEecCCCcEE
Q psy16880 14 SAVRSISFCS---KQHTLISGGDDGSICMWNLNSKLC-----------------DSAVRSISFCSKQRTLISGGDDGSIC 73 (84)
Q Consensus 14 ~~v~~~~~~~---~~~~l~~~~~~~~~~~~d~~~~~~-----------------~~~v~~~~~~~~~~~~~~~~~~~~i~ 73 (84)
..+.-+.|+| +...++.+..++.+.+..++.... ++.+---..+|+|+.++..+.||.+.
T Consensus 181 s~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~ 260 (1283)
T KOG1916|consen 181 SDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVG 260 (1283)
T ss_pred CCcceeeecccccccceeeeccCCCceeEeeechHHHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccc
Confidence 3445566666 456677777788888765543322 22222223689999999999999888
Q ss_pred EEeC
Q psy16880 74 MWNL 77 (84)
Q Consensus 74 ~~~~ 77 (84)
.|.+
T Consensus 261 f~Qi 264 (1283)
T KOG1916|consen 261 FYQI 264 (1283)
T ss_pred eeee
Confidence 7754
No 383
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.15 E-value=5.5 Score=23.09 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=38.2
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
++.+.++.|+|+.+.|.+..+...-.++--..+.. -...-.+.|..++.+.++--.++.+.++.
T Consensus 85 ~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~ 156 (316)
T COG3204 85 TANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFT 156 (316)
T ss_pred cccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEE
Confidence 56689999999999888877777666654444433 12223455555554444444455555443
No 384
>KOG2066|consensus
Probab=85.12 E-value=6.8 Score=25.78 Aligned_cols=62 Identities=15% Similarity=0.192 Sum_probs=40.9
Q ss_pred CEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCCCCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 15 AVRSISFCSKQHTLISGGDDGSICMWNLNSKLCDSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
.+.++++ ...+|+-|..+|.+.+++..... ......-+-.-.|..+++|+.||++.+..+-+
T Consensus 41 ~is~~av--~~~~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~ 102 (846)
T KOG2066|consen 41 AISCCAV--HDKFFALGTHRGAVYLTTCQGNP-KTNFDHSSSILEGEYVASCSDDGKVVIGSLFT 102 (846)
T ss_pred HHHHHHh--hcceeeeccccceEEEEecCCcc-cccccccccccCCceEEEecCCCcEEEeeccC
Confidence 3445544 46788999999999998875432 11111111144688999999999888876543
No 385
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=85.03 E-value=1.3 Score=15.65 Aligned_cols=9 Identities=11% Similarity=0.132 Sum_probs=3.4
Q ss_pred EEEEccCCC
Q psy16880 53 SISFCSKQR 61 (84)
Q Consensus 53 ~~~~~~~~~ 61 (84)
+++..+++.
T Consensus 6 gvav~~~g~ 14 (28)
T PF01436_consen 6 GVAVDSDGN 14 (28)
T ss_dssp EEEEETTSE
T ss_pred EEEEeCCCC
Confidence 333333333
No 386
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=84.95 E-value=8.5 Score=25.11 Aligned_cols=64 Identities=6% Similarity=0.243 Sum_probs=45.2
Q ss_pred cCEEEEEEc--cCCCEEEEeCCCCcEEEEeCCCC--CC--------CCCEEEEEEccCC---C---EEEEecCCCcEEEE
Q psy16880 14 SAVRSISFC--SKQHTLISGGDDGSICMWNLNSK--LC--------DSAVRSISFCSKQ---R---TLISGGDDGSICMW 75 (84)
Q Consensus 14 ~~v~~~~~~--~~~~~l~~~~~~~~~~~~d~~~~--~~--------~~~v~~~~~~~~~---~---~~~~~~~~~~i~~~ 75 (84)
.-++.++++ ...++++.+++...|.||-.... .. ...|.+|+|.++. . .+++++-.|.+.+|
T Consensus 164 ~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~ 243 (717)
T PF08728_consen 164 ASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTF 243 (717)
T ss_pred CceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEE
Confidence 456788888 67788888888888887654321 11 4578899997643 2 56677778888887
Q ss_pred eC
Q psy16880 76 NL 77 (84)
Q Consensus 76 ~~ 77 (84)
++
T Consensus 244 ~I 245 (717)
T PF08728_consen 244 KI 245 (717)
T ss_pred EE
Confidence 66
No 387
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=84.77 E-value=6.5 Score=23.59 Aligned_cols=43 Identities=19% Similarity=0.403 Sum_probs=31.5
Q ss_pred cEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 36 SICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 36 ~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
.+.+|+...... ...+-++.|..+. .+++...+|.++++|+..
T Consensus 62 ~I~iys~sG~ll~~i~w~~~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~G 110 (410)
T PF04841_consen 62 SIQIYSSSGKLLSSIPWDSGRIVGMGWTDDE-ELVVVQSDGTVRVYDLFG 110 (410)
T ss_pred EEEEECCCCCEeEEEEECCCCEEEEEECCCC-eEEEEEcCCEEEEEeCCC
Confidence 377777654433 5688899998755 466777899999999853
No 388
>KOG1916|consensus
Probab=84.58 E-value=5.7 Score=26.80 Aligned_cols=24 Identities=17% Similarity=0.289 Sum_probs=21.0
Q ss_pred EEccCCCEEEEeCCCCcEEEEeCC
Q psy16880 20 SFCSKQHTLISGGDDGSICMWNLN 43 (84)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~d~~ 43 (84)
..+|||..++.+..||.+.+|.+-
T Consensus 242 ~lSpDGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 242 SLSPDGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred eeCCCCcEEEEeecCCccceeeee
Confidence 368999999999999999998774
No 389
>KOG3630|consensus
Probab=83.93 E-value=2.1 Score=29.23 Aligned_cols=62 Identities=8% Similarity=0.053 Sum_probs=44.2
Q ss_pred EEEEEEccCC-CEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 16 VRSISFCSKQ-HTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 16 v~~~~~~~~~-~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
..++.|+|.- ...+....|+.+.+..+..... ....++++|+|.|+.++.+-..|++.-|.+
T Consensus 158 ~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P 227 (1405)
T KOG3630|consen 158 QLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP 227 (1405)
T ss_pred cccccccCCccchhhhhccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeec
Confidence 4577787743 3445556677777665543322 457899999999999999988888887754
No 390
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=83.22 E-value=9.7 Score=24.40 Aligned_cols=33 Identities=12% Similarity=0.346 Sum_probs=24.1
Q ss_pred CcCEEEEEEccCCCEEEEe-CCCCcEEEEeCCCC
Q psy16880 13 NSAVRSISFCSKQHTLISG-GDDGSICMWNLNSK 45 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~-~~~~~~~~~d~~~~ 45 (84)
.+.|.|-+|.+||+.|+.+ +..-.-.+||-...
T Consensus 155 ~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qK 188 (671)
T PF15390_consen 155 SGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQK 188 (671)
T ss_pred CceEEEEEecCcCCEEEEEeCCeEEEEEecCchh
Confidence 5789999999999877655 43435568887554
No 391
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=83.06 E-value=2 Score=16.34 Aligned_cols=19 Identities=16% Similarity=0.298 Sum_probs=10.4
Q ss_pred CCEEEEeCCCCcEEEEeCC
Q psy16880 25 QHTLISGGDDGSICMWNLN 43 (84)
Q Consensus 25 ~~~l~~~~~~~~~~~~d~~ 43 (84)
+..+..++.++.+..+|..
T Consensus 21 ~g~vyv~~~dg~l~ald~~ 39 (40)
T PF13570_consen 21 GGRVYVGTGDGNLYALDAA 39 (40)
T ss_dssp TSEEEEE-TTSEEEEEETT
T ss_pred CCEEEEEcCCCEEEEEeCC
Confidence 4455556666666666543
No 392
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=81.70 E-value=12 Score=24.48 Aligned_cols=64 Identities=11% Similarity=0.227 Sum_probs=45.2
Q ss_pred cCEEEEEEcc--CCCEEEEeCCCCcEEEEeCCC-------C-------------CC------CCCEEEEEEc--cCCCEE
Q psy16880 14 SAVRSISFCS--KQHTLISGGDDGSICMWNLNS-------K-------------LC------DSAVRSISFC--SKQRTL 63 (84)
Q Consensus 14 ~~v~~~~~~~--~~~~l~~~~~~~~~~~~d~~~-------~-------------~~------~~~v~~~~~~--~~~~~~ 63 (84)
..|.-|.... +...|+.+..+|.|.+|.... . .+ +....+++++ ...+++
T Consensus 101 HtIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlI 180 (717)
T PF08728_consen 101 HTINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLI 180 (717)
T ss_pred ceeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEE
Confidence 4455565554 446889999999999995410 0 01 5677888888 778888
Q ss_pred EEecCCCcEEEEeC
Q psy16880 64 ISGGDDGSICMWNL 77 (84)
Q Consensus 64 ~~~~~~~~i~~~~~ 77 (84)
+.++....|.||-.
T Consensus 181 AVSsNs~~VTVFaf 194 (717)
T PF08728_consen 181 AVSSNSQEVTVFAF 194 (717)
T ss_pred EEecCCceEEEEEE
Confidence 88888888888754
No 393
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=81.46 E-value=2.3 Score=16.00 Aligned_cols=10 Identities=0% Similarity=0.235 Sum_probs=4.2
Q ss_pred CcEEEEeCCC
Q psy16880 70 GSICMWNLNS 79 (84)
Q Consensus 70 ~~i~~~~~~~ 79 (84)
+.|.++|..+
T Consensus 14 ~~v~~id~~~ 23 (42)
T TIGR02276 14 NTVSVIDTAT 23 (42)
T ss_pred CEEEEEECCC
Confidence 3444444433
No 394
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=80.83 E-value=2.1 Score=15.22 Aligned_cols=19 Identities=16% Similarity=0.356 Sum_probs=10.6
Q ss_pred EEEecCCCcEEEEeCCCCe
Q psy16880 63 LISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 63 ~~~~~~~~~i~~~~~~~~~ 81 (84)
+..++.++.+..+|..+++
T Consensus 9 v~~~~~~g~l~a~d~~~G~ 27 (33)
T smart00564 9 VYVGSTDGTLYALDAKTGE 27 (33)
T ss_pred EEEEcCCCEEEEEEcccCc
Confidence 4444555666666665554
No 395
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=80.51 E-value=11 Score=23.10 Aligned_cols=28 Identities=14% Similarity=0.181 Sum_probs=16.8
Q ss_pred cCEEEEEEccCCCEEEEeCCCCcEEEEeC
Q psy16880 14 SAVRSISFCSKQHTLISGGDDGSICMWNL 42 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~~~~~~~d~ 42 (84)
.....++++|+++.++. ..++...++..
T Consensus 33 ~~p~~ls~npngr~v~V-~g~geY~iyt~ 60 (443)
T PF04053_consen 33 IYPQSLSHNPNGRFVLV-CGDGEYEIYTA 60 (443)
T ss_dssp S--SEEEE-TTSSEEEE-EETTEEEEEET
T ss_pred cCCeeEEECCCCCEEEE-EcCCEEEEEEc
Confidence 34567888888887777 44555666653
No 396
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=80.12 E-value=8.9 Score=21.91 Aligned_cols=62 Identities=19% Similarity=0.325 Sum_probs=40.3
Q ss_pred CEEEEEEccCCCEEEEeCCCCcEEEEeCCC--CCC--------CCCEEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy16880 15 AVRSISFCSKQHTLISGGDDGSICMWNLNS--KLC--------DSAVRSISFCSKQRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~--~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (84)
.+.++.. .+.+++.|.....+.++..+. ... ...+.++.+-+++..++.+..++.+.++...
T Consensus 131 ~i~sl~~--~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 131 YITSLSV--FKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp SEEEEEE--ETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred EEEEEec--cccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 4455544 356888888777777664332 212 4457888887666688888889999888664
No 397
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=80.04 E-value=9.9 Score=22.42 Aligned_cols=57 Identities=11% Similarity=0.122 Sum_probs=35.0
Q ss_pred CCEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 25 QHTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 25 ~~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
+..++.+..++.+..+|..+++. ...+.+.... .+..++.+..++.+.-+|..+++.
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v-~~~~v~v~~~~g~l~ald~~tG~~ 182 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVV-SDGLVLVHTSNGMLQALNESDGAV 182 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEE-ECCEEEEECCCCEEEEEEccCCCE
Confidence 44566677888888899887766 2222111111 123455666678888888877764
No 398
>KOG4499|consensus
Probab=79.85 E-value=8.9 Score=21.76 Aligned_cols=67 Identities=3% Similarity=0.017 Sum_probs=41.5
Q ss_pred EEEEEccCCCEE-EEeCCCCcEEEEeCC--CCCC----------------CCCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 17 RSISFCSKQHTL-ISGGDDGSICMWNLN--SKLC----------------DSAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 17 ~~~~~~~~~~~l-~~~~~~~~~~~~d~~--~~~~----------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
..++|+.+.+.+ .+-+.+..+.-||.+ ++.. ....-++++...|.+.++.-..+++...|+
T Consensus 161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp 240 (310)
T KOG4499|consen 161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDP 240 (310)
T ss_pred ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECC
Confidence 567787766544 455666677667743 3322 112334444555666666666788888999
Q ss_pred CCCeec
Q psy16880 78 NSKLCD 83 (84)
Q Consensus 78 ~~~~~~ 83 (84)
.+++.+
T Consensus 241 ~tGK~L 246 (310)
T KOG4499|consen 241 TTGKIL 246 (310)
T ss_pred CCCcEE
Confidence 888864
No 399
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=78.14 E-value=11 Score=22.75 Aligned_cols=62 Identities=15% Similarity=0.167 Sum_probs=27.9
Q ss_pred EEccCCCEEE-EeCCCC--cEEEEeCCCCCC------C-CCEEEEEEccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 20 SFCSKQHTLI-SGGDDG--SICMWNLNSKLC------D-SAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 20 ~~~~~~~~l~-~~~~~~--~~~~~d~~~~~~------~-~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
+|.++|+.|+ .+..++ .+.+-|+.+... . ....+..++|+.+.+.-......+.--|+.+.+
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e 113 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLE 113 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCc
Confidence 4566776554 444455 444556665544 1 112234556666665544444556666666654
No 400
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=78.14 E-value=11 Score=22.24 Aligned_cols=44 Identities=11% Similarity=0.196 Sum_probs=29.4
Q ss_pred CCceEEEeccCCCcCEEEEEEccCCC-EEEEe-CCCCcEEEEeCCCCC
Q psy16880 1 DGSIIHTFVHSNNSAVRSISFCSKQH-TLISG-GDDGSICMWNLNSKL 46 (84)
Q Consensus 1 ~g~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~~~~~~~~~d~~~~~ 46 (84)
+++.+..++. ..++.+|..+.+.+ +|++. ..++.+.+||..+++
T Consensus 278 t~krv~Ri~l--~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk 323 (342)
T PF06433_consen 278 THKRVARIPL--EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGK 323 (342)
T ss_dssp TTEEEEEEEE--EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--
T ss_pred CCeEEEEEeC--CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCc
Confidence 3566666665 34577888888665 55443 457899999998754
No 401
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=78.06 E-value=10 Score=24.74 Aligned_cols=33 Identities=6% Similarity=0.287 Sum_probs=27.3
Q ss_pred CcCEEEEEEccC---CCEEEEeCCCCcEEEEeCCCC
Q psy16880 13 NSAVRSISFCSK---QHTLISGGDDGSICMWNLNSK 45 (84)
Q Consensus 13 ~~~v~~~~~~~~---~~~l~~~~~~~~~~~~d~~~~ 45 (84)
...|..+.|+|. +..|+.=..|+.+++||+...
T Consensus 146 ~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 146 SLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence 457899999996 478888888999999999744
No 402
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=76.92 E-value=13 Score=21.91 Aligned_cols=62 Identities=11% Similarity=0.224 Sum_probs=44.1
Q ss_pred EEEEEEccCCCEEEEeCCCCcEEEEeCCCC-----C-C-------------CCCEEEEEEccCCC------------EEE
Q psy16880 16 VRSISFCSKQHTLISGGDDGSICMWNLNSK-----L-C-------------DSAVRSISFCSKQR------------TLI 64 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~-----~-~-------------~~~v~~~~~~~~~~------------~~~ 64 (84)
-+-|+++|.+.+.++....+...+||.... . . ....+.+.|..... .++
T Consensus 25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fi 104 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFL 104 (336)
T ss_pred cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEE
Confidence 468899999988888888889999998711 1 1 23456666653322 256
Q ss_pred EecCCCcEEEEeC
Q psy16880 65 SGGDDGSICMWNL 77 (84)
Q Consensus 65 ~~~~~~~i~~~~~ 77 (84)
.++.+++|.-|..
T Consensus 105 f~tEdGTisaW~p 117 (336)
T TIGR03118 105 FVTEDGTLSGWAP 117 (336)
T ss_pred EEeCCceEEeecC
Confidence 7788999999975
No 403
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.61 E-value=13 Score=21.80 Aligned_cols=47 Identities=15% Similarity=0.292 Sum_probs=32.4
Q ss_pred EEccCCCEEEEeC-----CCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEe
Q psy16880 20 SFCSKQHTLISGG-----DDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISG 66 (84)
Q Consensus 20 ~~~~~~~~l~~~~-----~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~ 66 (84)
.|+|+|.+|.+.- ..|.+-+||.+.... .-....+.+.++++.++..
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvva 179 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVA 179 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEe
Confidence 3788998887653 345778899875544 3345677888888877654
No 404
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=76.51 E-value=11 Score=20.83 Aligned_cols=43 Identities=12% Similarity=0.278 Sum_probs=31.0
Q ss_pred CEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecC
Q psy16880 26 HTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGD 68 (84)
Q Consensus 26 ~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~ 68 (84)
..|..+.....+.+|++..... -+.|..+.++..|.++++--.
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~ 79 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEE 79 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEe
Confidence 4444445566799999983333 567889999999999988643
No 405
>KOG1900|consensus
Probab=76.37 E-value=24 Score=24.88 Aligned_cols=67 Identities=13% Similarity=0.381 Sum_probs=44.6
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEE-EeCCCC---C-C------------------------CCCEEEEEEccCCCEE
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICM-WNLNSK---L-C------------------------DSAVRSISFCSKQRTL 63 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~-~d~~~~---~-~------------------------~~~v~~~~~~~~~~~~ 63 (84)
...|.++....+|+.|.+|..++...+ |....+ + . ..+|..+........+
T Consensus 178 g~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~Il 257 (1311)
T KOG1900|consen 178 GVSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRNIL 257 (1311)
T ss_pred CceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecccccee
Confidence 346788888888999888776643332 221111 0 0 2367777777666677
Q ss_pred EEecCCCcEEEEeCCC
Q psy16880 64 ISGGDDGSICMWNLNS 79 (84)
Q Consensus 64 ~~~~~~~~i~~~~~~~ 79 (84)
.+-+..+++..|++..
T Consensus 258 Y~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 258 YVLSEKGTVSAYDIGG 273 (1311)
T ss_pred eeeccCceEEEEEccC
Confidence 7788889999999865
No 406
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=76.31 E-value=19 Score=23.68 Aligned_cols=61 Identities=21% Similarity=0.148 Sum_probs=45.3
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------------------------CCCEEEEEEccCCCEEEEe
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------------------------DSAVRSISFCSKQRTLISG 66 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------------------------~~~v~~~~~~~~~~~~~~~ 66 (84)
.+.|.++....-+..++....||.|.++|-.+... ...+-.++|+|.+..++..
T Consensus 259 ~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~ 338 (753)
T PF11635_consen 259 NKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQI 338 (753)
T ss_pred CCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEE
Confidence 45677887777778889999999999998765522 1133457899998888888
Q ss_pred cCCCcEE
Q psy16880 67 GDDGSIC 73 (84)
Q Consensus 67 ~~~~~i~ 73 (84)
..++.+.
T Consensus 339 ~~~~~~~ 345 (753)
T PF11635_consen 339 DEDGKTK 345 (753)
T ss_pred ecCCCce
Confidence 8788754
No 407
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=75.45 E-value=13 Score=21.49 Aligned_cols=63 Identities=11% Similarity=0.225 Sum_probs=38.0
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
.+.+..+...++++.++.+.....+..||--...- ...+..+.|.|++...+.. ..+.+..-+
T Consensus 144 ~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~ 213 (302)
T PF14870_consen 144 SGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSD 213 (302)
T ss_dssp ---EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE
T ss_pred cceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEcc
Confidence 35577777888999888877666667777543211 6789999999998755544 677777765
No 408
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=75.19 E-value=21 Score=23.53 Aligned_cols=30 Identities=17% Similarity=0.437 Sum_probs=25.9
Q ss_pred CCCEEEEEEcc-CCCEEEEecCCCcEEEEeC
Q psy16880 48 DSAVRSISFCS-KQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 48 ~~~v~~~~~~~-~~~~~~~~~~~~~i~~~~~ 77 (84)
......++|+| +...++.+...|.-.+|++
T Consensus 145 g~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i 175 (765)
T PF10214_consen 145 GFPHADVAFNPWDQRQFAIVDEKGNWSVWDI 175 (765)
T ss_pred CCccceEEeccCccceEEEEeccCcEEEEEe
Confidence 55788999998 4568999999999999999
No 409
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=74.83 E-value=8.4 Score=18.86 Aligned_cols=60 Identities=18% Similarity=0.302 Sum_probs=36.6
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC----CCCEEEEEEc-cCC---CEEEEecCCCcEE
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC----DSAVRSISFC-SKQ---RTLISGGDDGSIC 73 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~----~~~v~~~~~~-~~~---~~~~~~~~~~~i~ 73 (84)
.+.|..+..... ..|+.+..+|++-+|+-....- +..+.++.+. .++ +.+++|-.+|.+-
T Consensus 42 ~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~RlWRiKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 42 TDKVTSLCSLGG-GRFAYALANGTVGVYDRSQRLWRIKSKNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred ccceEEEEEcCC-CEEEEEecCCEEEEEeCcceeeeeccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 466777766544 6788899999998887643221 4445555543 332 3566666666653
No 410
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=73.19 E-value=4.7 Score=15.18 Aligned_cols=16 Identities=19% Similarity=0.318 Sum_probs=8.8
Q ss_pred ecCCCcEEEEeCCCCe
Q psy16880 66 GGDDGSICMWNLNSKL 81 (84)
Q Consensus 66 ~~~~~~i~~~~~~~~~ 81 (84)
++.++.+.-.|.++++
T Consensus 6 ~~~~g~l~AlD~~TG~ 21 (38)
T PF01011_consen 6 GTPDGYLYALDAKTGK 21 (38)
T ss_dssp ETTTSEEEEEETTTTS
T ss_pred eCCCCEEEEEECCCCC
Confidence 3555555555555554
No 411
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=73.00 E-value=15 Score=20.99 Aligned_cols=59 Identities=12% Similarity=0.218 Sum_probs=36.0
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCC-C--------CCCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKL-C--------DSAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~-~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
.++|.+++-. ++..+++. ...+.+|++.... . ...+.++.. .+..++.+.....+.++.
T Consensus 88 ~g~V~ai~~~-~~~lv~~~--g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~--~~~~I~vgD~~~sv~~~~ 155 (321)
T PF03178_consen 88 KGPVTAICSF-NGRLVVAV--GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV--FKNYILVGDAMKSVSLLR 155 (321)
T ss_dssp SS-EEEEEEE-TTEEEEEE--TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE--ETTEEEEEESSSSEEEEE
T ss_pred cCcceEhhhh-CCEEEEee--cCEEEEEEccCcccchhhheecceEEEEEEec--cccEEEEEEcccCEEEEE
Confidence 6788888766 44433333 3678899887666 3 334444444 355778887766666663
No 412
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=72.05 E-value=22 Score=22.33 Aligned_cols=24 Identities=8% Similarity=0.012 Sum_probs=18.9
Q ss_pred CCEEEEecCCCcEEEEeCCCCeec
Q psy16880 60 QRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 60 ~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
+..++.+..++.++.+|.++++.+
T Consensus 472 g~lvf~g~~~G~l~a~D~~TGe~l 495 (527)
T TIGR03075 472 GDLVFYGTLEGYFKAFDAKTGEEL 495 (527)
T ss_pred CcEEEEECCCCeEEEEECCCCCEe
Confidence 345666777999999999998864
No 413
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=71.60 E-value=19 Score=21.42 Aligned_cols=65 Identities=3% Similarity=0.118 Sum_probs=44.9
Q ss_pred EEEEEccCCCEEEEeCC---CCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEec-CCCcEEEEeCCCCe
Q psy16880 17 RSISFCSKQHTLISGGD---DGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGG-DDGSICMWNLNSKL 81 (84)
Q Consensus 17 ~~~~~~~~~~~l~~~~~---~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~ 81 (84)
..+++.+++..+..+.. +..+.+.|..+... ......+++.|++..+.... .++.+.+.|.....
T Consensus 119 ~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~ 193 (381)
T COG3391 119 VGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTPTGVAVDPDGNKVYVTNSDDNTVSVIDTSGNS 193 (381)
T ss_pred ceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCcceEEECCCCCeEEEEecCCCeEEEEeCCCcc
Confidence 46788888876655544 56777777765554 22338899999998665554 57888888876544
No 414
>KOG3616|consensus
Probab=69.46 E-value=14 Score=24.80 Aligned_cols=33 Identities=21% Similarity=0.373 Sum_probs=27.0
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 80 (84)
..-+..++-+|.+..++.+..|+.|.+|+....
T Consensus 14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r 46 (1636)
T KOG3616|consen 14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPR 46 (1636)
T ss_pred cceeeeeeecCCCceEEEEecCCcEEEEeeccc
Confidence 345677888899999999999999999986543
No 415
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=69.40 E-value=13 Score=18.90 Aligned_cols=61 Identities=11% Similarity=0.215 Sum_probs=35.7
Q ss_pred EEccCCCEEEEeCCCCcEEEEeCCCCCC--------------CCCEEEEEEcc----CCCEEEEecCCCcEEEEeCCCC
Q psy16880 20 SFCSKQHTLISGGDDGSICMWNLNSKLC--------------DSAVRSISFCS----KQRTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 20 ~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------------~~~v~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~ 80 (84)
+|......|+++...+++.+++...... ...|++++-.+ +..-++..+....+..||....
T Consensus 5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N 83 (136)
T PF14781_consen 5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENN 83 (136)
T ss_pred EeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccC
Confidence 3444455667777777777776543221 56677765433 2233444445667888988654
No 416
>KOG2280|consensus
Probab=69.27 E-value=28 Score=23.16 Aligned_cols=31 Identities=16% Similarity=0.385 Sum_probs=22.1
Q ss_pred cCEEEEEEccCCCEEEEeCCCCcEEEEeCCCC
Q psy16880 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNSK 45 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~ 45 (84)
+.+..|.|+.+ ..|+....+|.+.+|++...
T Consensus 84 ~~lI~mgWs~~-eeLI~v~k~g~v~Vy~~~ge 114 (829)
T KOG2280|consen 84 GELIGMGWSDD-EELICVQKDGTVHVYGLLGE 114 (829)
T ss_pred CCeeeecccCC-ceEEEEeccceEEEeecchh
Confidence 46678888854 45556688889999887644
No 417
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=67.82 E-value=11 Score=17.43 Aligned_cols=30 Identities=13% Similarity=0.179 Sum_probs=21.7
Q ss_pred CEEEEEEccCCCEEEEec-CCCcEEEEeCCC
Q psy16880 50 AVRSISFCSKQRTLISGG-DDGSICMWNLNS 79 (84)
Q Consensus 50 ~v~~~~~~~~~~~~~~~~-~~~~i~~~~~~~ 79 (84)
...+|.++|+++.+..++ ..+.|+++..+.
T Consensus 55 ~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~ 85 (86)
T PF01731_consen 55 FANGIAISPDKKYLYVASSLAHSIHVYKRHK 85 (86)
T ss_pred CCceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence 456888999888776655 467899987643
No 418
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=66.55 E-value=25 Score=20.84 Aligned_cols=55 Identities=7% Similarity=0.084 Sum_probs=29.6
Q ss_pred CEEEEeCCCCcEEEEeCCCCCC--C-----CC-EEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 26 HTLISGGDDGSICMWNLNSKLC--D-----SA-VRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 26 ~~l~~~~~~~~~~~~d~~~~~~--~-----~~-v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
..+..++.++.+..+|..++.. + .. ...... .+..++.++.++.+...|..+++.
T Consensus 295 ~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~ 357 (394)
T PRK11138 295 GRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRF 357 (394)
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCE
Confidence 3444555566666666655433 0 00 111111 133566677788888888877764
No 419
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=66.25 E-value=29 Score=21.53 Aligned_cols=47 Identities=6% Similarity=0.097 Sum_probs=33.6
Q ss_pred cCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------------CCCEEEEEEccCC
Q psy16880 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------------DSAVRSISFCSKQ 60 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------------~~~v~~~~~~~~~ 60 (84)
..-..|+|.|++++|++-...+.+.+++-..... +.....++++|+-
T Consensus 30 ~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 30 NKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 4457899999999888776668888776433211 3557889999874
No 420
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=64.27 E-value=26 Score=20.39 Aligned_cols=43 Identities=21% Similarity=0.386 Sum_probs=30.4
Q ss_pred EEEEEEccCCCEEEEeCCCCcEEEEeCCCCC-C------------CCCEEEEEEccC
Q psy16880 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKL-C------------DSAVRSISFCSK 59 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~-~------------~~~v~~~~~~~~ 59 (84)
-..|+|.|+++++++-. .+.|.+++..... . ......++++|+
T Consensus 4 P~~~a~~pdG~l~v~e~-~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~ 59 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVAER-SGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPD 59 (331)
T ss_dssp EEEEEEETTSCEEEEET-TTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred ceEEEEeCCCcEEEEeC-CceEEEEeCCCcCcceecccccccccccCCcccceeccc
Confidence 46899999998888755 8888888732221 1 456788999984
No 421
>KOG2114|consensus
Probab=64.17 E-value=43 Score=22.76 Aligned_cols=68 Identities=9% Similarity=0.246 Sum_probs=43.3
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
.++|+.+.+..++...+-+.....|.+|.+....+ +....|..+++....+++++ +..+.+|+....+
T Consensus 171 ~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~ 246 (933)
T KOG2114|consen 171 KEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRG 246 (933)
T ss_pred CCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCCcc
Confidence 57899999988877634444455677777764432 44567777776555455553 4567788765443
No 422
>KOG2109|consensus
Probab=63.53 E-value=2.9 Score=26.83 Aligned_cols=36 Identities=14% Similarity=0.337 Sum_probs=24.7
Q ss_pred EEeccCCCcCEEEEEEccCCCEEEEeCCCC-cEEEEeC
Q psy16880 6 HTFVHSNNSAVRSISFCSKQHTLISGGDDG-SICMWNL 42 (84)
Q Consensus 6 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~~~~d~ 42 (84)
+.++.| ++++..++|.+.+..+++++-.| .+.++.+
T Consensus 309 ~QfkAh-kspiSaLcfdqsgsllViasi~g~nVnvfRi 345 (788)
T KOG2109|consen 309 RQFKAH-KSPISALCFDQSGSLLVIASITGRNVNVFRI 345 (788)
T ss_pred hheeee-cCcccccccccCceEEEEEeeccceeeeEEe
Confidence 345566 78888888888888887776555 4444444
No 423
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=62.78 E-value=19 Score=21.61 Aligned_cols=31 Identities=23% Similarity=0.446 Sum_probs=24.0
Q ss_pred cCEEEEEEccCCCEEEEeCCCCcEEEEeCCC
Q psy16880 14 SAVRSISFCSKQHTLISGGDDGSICMWNLNS 44 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~ 44 (84)
..|.+++..+..+.+.+...++.+.+||+..
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 3488899988888999999999999999964
No 424
>KOG2467|consensus
Probab=61.91 E-value=12 Score=22.72 Aligned_cols=22 Identities=27% Similarity=0.604 Sum_probs=18.5
Q ss_pred CCCEEEEecCCCcEEEEeCCCC
Q psy16880 59 KQRTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 59 ~~~~~~~~~~~~~i~~~~~~~~ 80 (84)
.+-.+++++.|+.+.+||++..
T Consensus 340 ~Gy~lvtgGTDnHlvLvDLr~~ 361 (477)
T KOG2467|consen 340 RGYKLVTGGTDNHLVLVDLRPK 361 (477)
T ss_pred cCceEecCCccceEEEEecccc
Confidence 4567899999999999999754
No 425
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=60.81 E-value=17 Score=16.99 Aligned_cols=35 Identities=6% Similarity=0.115 Sum_probs=21.4
Q ss_pred CCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEe
Q psy16880 32 GDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISG 66 (84)
Q Consensus 32 ~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~ 66 (84)
...|.+.-||..++.. =.-..+++.++++..++.+
T Consensus 34 ~~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 34 RPTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVA 74 (89)
T ss_dssp ---EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEE
T ss_pred CCCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEE
Confidence 4456677777776654 2356889999998866554
No 426
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=55.13 E-value=36 Score=19.02 Aligned_cols=54 Identities=7% Similarity=0.117 Sum_probs=35.3
Q ss_pred CEEEEEEccCCCEEEEeC---CCCcEEEEeCC--CCC--C------------CCCEEEEEEccCCCEEEEecC
Q psy16880 15 AVRSISFCSKQHTLISGG---DDGSICMWNLN--SKL--C------------DSAVRSISFCSKQRTLISGGD 68 (84)
Q Consensus 15 ~v~~~~~~~~~~~l~~~~---~~~~~~~~d~~--~~~--~------------~~~v~~~~~~~~~~~~~~~~~ 68 (84)
.|..++++|+|..++... ..+.+.+--+. ... . ...+..+.|.++..+++....
T Consensus 113 ~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~ 185 (253)
T PF10647_consen 113 RITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRS 185 (253)
T ss_pred ceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCC
Confidence 799999999998766543 34555543221 111 1 346889999998887665544
No 427
>KOG4499|consensus
Probab=52.94 E-value=43 Score=19.24 Aligned_cols=40 Identities=8% Similarity=0.133 Sum_probs=30.8
Q ss_pred EEEccCCCEEEEeCCCCcEEEEeCCCCCC-------CCCEEEEEEcc
Q psy16880 19 ISFCSKQHTLISGGDDGSICMWNLNSKLC-------DSAVRSISFCS 58 (84)
Q Consensus 19 ~~~~~~~~~l~~~~~~~~~~~~d~~~~~~-------~~~v~~~~~~~ 58 (84)
|+...+|.++++.-+.+.+...|..+++. ..++++.+|-.
T Consensus 217 m~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 217 MTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred ceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence 33455778888888888999899888776 56788888863
No 428
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=50.86 E-value=21 Score=15.06 Aligned_cols=17 Identities=18% Similarity=0.272 Sum_probs=11.6
Q ss_pred EEEEEEccCCCEEEEeC
Q psy16880 16 VRSISFCSKQHTLISGG 32 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~~ 32 (84)
+.++..-|+++.+++|.
T Consensus 3 ~~~~~~q~DGkIlv~G~ 19 (55)
T TIGR02608 3 AYAVAVQSDGKILVAGY 19 (55)
T ss_pred eEEEEECCCCcEEEEEE
Confidence 45666777777777764
No 429
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=50.41 E-value=3.1 Score=14.26 Aligned_cols=7 Identities=14% Similarity=0.301 Sum_probs=3.9
Q ss_pred EccCCCE
Q psy16880 21 FCSKQHT 27 (84)
Q Consensus 21 ~~~~~~~ 27 (84)
|+|+|++
T Consensus 8 FSp~Grl 14 (23)
T PF10584_consen 8 FSPDGRL 14 (23)
T ss_dssp BBTTSSB
T ss_pred ECCCCeE
Confidence 5666553
No 430
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=49.71 E-value=51 Score=19.13 Aligned_cols=32 Identities=16% Similarity=0.140 Sum_probs=24.6
Q ss_pred EEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC
Q psy16880 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKLC 47 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~ 47 (84)
+.++...++|.+|++...-..+.+.|-.++..
T Consensus 146 iNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I 177 (299)
T PF14269_consen 146 INSVDKDDDGDYLISSRNTSTIYKIDPSTGKI 177 (299)
T ss_pred eeeeeecCCccEEEEecccCEEEEEECCCCcE
Confidence 67777778889999888887887777666554
No 431
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=48.05 E-value=71 Score=20.37 Aligned_cols=55 Identities=20% Similarity=0.222 Sum_probs=35.5
Q ss_pred CEEEEeCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 26 HTLISGGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 26 ~~l~~~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
+-+++-..+|.+.++.....+. ...+..+.++|++..+++- ..+.|+++.+.+..
T Consensus 329 kgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~~~~~Sp~~~~Ll~e-~~gki~~~~l~Nr~ 389 (733)
T COG4590 329 KGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQLVAMSPNQAYLLSE-DQGKIRLAQLENRN 389 (733)
T ss_pred ceEEEEcCCCceeeeecccCcceehhhhhcCcceeeeCcccchheee-cCCceEEEEecCCC
Confidence 3455556667776655443333 3456778899988776654 45779988877654
No 432
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=47.61 E-value=17 Score=12.97 Aligned_cols=15 Identities=7% Similarity=0.164 Sum_probs=6.8
Q ss_pred CEEEEeCCCCcEEEE
Q psy16880 26 HTLISGGDDGSICMW 40 (84)
Q Consensus 26 ~~l~~~~~~~~~~~~ 40 (84)
..++.+...+.+++|
T Consensus 12 ~~vavaTS~~~lRif 26 (27)
T PF12341_consen 12 SWVAVATSAGYLRIF 26 (27)
T ss_pred CEEEEEeCCCeEEec
Confidence 344444444444443
No 433
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=46.83 E-value=58 Score=19.02 Aligned_cols=27 Identities=22% Similarity=0.175 Sum_probs=22.3
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
++.+.+--|+.+|.+++++...|.++.
T Consensus 258 rgl~~G~lf~r~G~LiA~~~QEG~~r~ 284 (289)
T COG1946 258 RGLVRGQLFDRDGQLIASVVQEGLIRY 284 (289)
T ss_pred cceeeeEEEcCCCCEEEEEeeeEEEec
Confidence 566777778999999999998887765
No 434
>KOG4460|consensus
Probab=45.19 E-value=85 Score=20.44 Aligned_cols=28 Identities=14% Similarity=0.036 Sum_probs=22.6
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEEEe
Q psy16880 49 SAVRSISFCSKQRTLISGGDDGSICMWN 76 (84)
Q Consensus 49 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~ 76 (84)
-.|..+..++.|..++..+.+|.+.++-
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMeL 131 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVMEL 131 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEEc
Confidence 4578888899999898888888877654
No 435
>PRK10115 protease 2; Provisional
Probab=44.31 E-value=91 Score=20.54 Aligned_cols=65 Identities=9% Similarity=0.092 Sum_probs=39.5
Q ss_pred EEEEEEccCCCEEEEe-----CCCCcEEEEeCCCCCC-----CCCEEEEEEccCCCEEEEecCC------CcEEEEeCCC
Q psy16880 16 VRSISFCSKQHTLISG-----GDDGSICMWNLNSKLC-----DSAVRSISFCSKQRTLISGGDD------GSICMWNLNS 79 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~-----~~~~~~~~~d~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~------~~i~~~~~~~ 79 (84)
+..+.++|+++.++-+ +....+.+.|+.++.. ...-..++|.+++..++-...+ ..+..+++.+
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt 208 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGT 208 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcceEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCC
Confidence 5677899999877654 2223566778766552 2222568999888766544322 2455556655
Q ss_pred C
Q psy16880 80 K 80 (84)
Q Consensus 80 ~ 80 (84)
+
T Consensus 209 ~ 209 (686)
T PRK10115 209 P 209 (686)
T ss_pred C
Confidence 4
No 436
>PF15644 Tox-PL: Papain fold toxin 1; PDB: 3B21_A.
Probab=43.12 E-value=41 Score=16.17 Aligned_cols=22 Identities=14% Similarity=0.151 Sum_probs=15.4
Q ss_pred CCEEEEecCCCcEEEEeCCCCe
Q psy16880 60 QRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 60 ~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
++.+...-.+|.|.+||..+++
T Consensus 88 gHa~nvv~~~G~i~~~D~Q~G~ 109 (111)
T PF15644_consen 88 GHAFNVVNQNGKIVFLDPQSGK 109 (111)
T ss_dssp TTEEEEEEE-SSEEEEBTTTTB
T ss_pred ceEEEEEeCCCeEEEEeCCCCC
Confidence 5556555677889999988765
No 437
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=42.86 E-value=69 Score=18.75 Aligned_cols=60 Identities=12% Similarity=0.255 Sum_probs=34.0
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEEEEeCC-CCC--------C---CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSICMWNLN-SKL--------C---DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~-~~~--------~---~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
...|..|.|.|++.+.+.+ ..+.+.+-+.. ... . .-.+..++|.+.....++++ .+.+..
T Consensus 186 ~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg-~G~l~~ 257 (302)
T PF14870_consen 186 SRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGG-SGTLLV 257 (302)
T ss_dssp SS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEES-TT-EEE
T ss_pred cceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeC-CccEEE
Confidence 4578999999998876655 66777665511 000 0 33488999998877666654 444443
No 438
>KOG1983|consensus
Probab=39.81 E-value=62 Score=22.43 Aligned_cols=24 Identities=25% Similarity=0.499 Sum_probs=18.9
Q ss_pred ccCCCEEEEeCCCCcEEEEeCCCC
Q psy16880 22 CSKQHTLISGGDDGSICMWNLNSK 45 (84)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~d~~~~ 45 (84)
.+++..++++..|+.+.+||...+
T Consensus 243 ~~~~~~~v~~h~Dgs~~fWd~s~g 266 (993)
T KOG1983|consen 243 SRDGSHFVSYHTDGSYAFWDVSSG 266 (993)
T ss_pred ccCCceEEEEEecCCEEeeecCCC
Confidence 445778888888888888888764
No 439
>KOG4649|consensus
Probab=39.78 E-value=79 Score=18.55 Aligned_cols=27 Identities=15% Similarity=0.225 Sum_probs=22.3
Q ss_pred EccCCCEEEEeCCCCcEEEEeCCCCCC
Q psy16880 21 FCSKQHTLISGGDDGSICMWNLNSKLC 47 (84)
Q Consensus 21 ~~~~~~~l~~~~~~~~~~~~d~~~~~~ 47 (84)
..+++..+..++.|+.+...|..+...
T Consensus 101 ~d~~~glIycgshd~~~yalD~~~~~c 127 (354)
T KOG4649|consen 101 CDFDGGLIYCGSHDGNFYALDPKTYGC 127 (354)
T ss_pred EcCCCceEEEecCCCcEEEecccccce
Confidence 456889999999999999889876544
No 440
>PF02870 Methyltransf_1N: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; InterPro: IPR008332 Synonym(s): 6-O-methylguanine-DNA methyltransferase, O-6-methylguanine-DNA-alkyltransferase The repair of DNA containing O6-alkylated guanine is carried out by DNA-[protein]-cysteine S-methyltransferase (2.1.1.63 from EC). The major mutagenic and carcinogenic effect of methylating agents in DNA is the formation of O6-alkylguanine. The alkyl group at the O-6 position is transferred to a cysteine residue in the enzyme []. This is a suicide reaction since the enzyme is irreversibly inactivated and the methylated protein accumulates as a dead-end product. Most, but not all of the methyltransferases are also able to repair O-4-methylthymine. DNA-[protein]-cysteine S-methyltransferases are widely distributed and are found in various prokaryotic and eukaryotic sources []. This group of proteins are characterised by having an N-terminal ribonuclease-like domain associated with 6-O-methylguanine DNA methyltransferase activity (IPR001497 from INTERPRO).; GO: 0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity, 0006281 DNA repair; PDB: 1SFE_A 1T39_B 1T38_A 1EH7_A 1EH6_A 1YFH_C 1EH8_A 1QNT_A.
Probab=39.68 E-value=34 Score=14.98 Aligned_cols=20 Identities=10% Similarity=0.046 Sum_probs=13.9
Q ss_pred ccCCCEEEEeCCCCcEEEEe
Q psy16880 22 CSKQHTLISGGDDGSICMWN 41 (84)
Q Consensus 22 ~~~~~~l~~~~~~~~~~~~d 41 (84)
+|-|..+++++..+.+.++-
T Consensus 9 sPlG~l~l~a~e~gL~~i~f 28 (77)
T PF02870_consen 9 SPLGPLLLAASEKGLCGIDF 28 (77)
T ss_dssp ETTEEEEEEEETTCEEEEEE
T ss_pred CCCeEEEEEEECCeEEEEEE
Confidence 56777778888777666543
No 441
>KOG2280|consensus
Probab=38.98 E-value=1.2e+02 Score=20.55 Aligned_cols=44 Identities=18% Similarity=0.394 Sum_probs=31.6
Q ss_pred CCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEecCCCcEEEEeCC
Q psy16880 34 DGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGGDDGSICMWNLN 78 (84)
Q Consensus 34 ~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (84)
...+.+|++..... ...+-.+.|+.+. .+++...+|++++|++.
T Consensus 63 ~~~I~If~~sG~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~ 112 (829)
T KOG2280|consen 63 RPYIRIFNISGQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLL 112 (829)
T ss_pred ceeEEEEeccccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecc
Confidence 34567777654433 4478889998765 47777789999999864
No 442
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=38.20 E-value=1.2e+02 Score=20.29 Aligned_cols=36 Identities=22% Similarity=0.047 Sum_probs=27.6
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCeec
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLCD 83 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (84)
.+.|..+....-+..++..-.||.|.++|..+.+.+
T Consensus 259 ~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~ 294 (753)
T PF11635_consen 259 NKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKEL 294 (753)
T ss_pred CCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhh
Confidence 456777776666667777888999999998887654
No 443
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=37.84 E-value=1e+02 Score=19.37 Aligned_cols=34 Identities=12% Similarity=0.222 Sum_probs=20.6
Q ss_pred cCEEEEEEccCCCEE-EEeCCCCcEEEEeCCCCCC
Q psy16880 14 SAVRSISFCSKQHTL-ISGGDDGSICMWNLNSKLC 47 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l-~~~~~~~~~~~~d~~~~~~ 47 (84)
.-|..|..+.+.++| ++.-..|.++.||+..+..
T Consensus 312 ~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~ 346 (461)
T PF05694_consen 312 PLITDILISLDDRFLYVSNWLHGDVRQYDISDPFN 346 (461)
T ss_dssp -----EEE-TTS-EEEEEETTTTEEEEEE-SSTTS
T ss_pred CceEeEEEccCCCEEEEEcccCCcEEEEecCCCCC
Confidence 346888888888866 5667899999999976544
No 444
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=37.49 E-value=31 Score=13.11 Aligned_cols=22 Identities=18% Similarity=0.249 Sum_probs=17.0
Q ss_pred cCEEEEEEccCCCEEEEeCCCC
Q psy16880 14 SAVRSISFCSKQHTLISGGDDG 35 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~~ 35 (84)
.....|++.+++...++|..++
T Consensus 13 ~~~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 13 DYGNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred eeEEEEEECCCCCEEEEEeecC
Confidence 3467888899999888887654
No 445
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B.
Probab=37.11 E-value=33 Score=13.32 Aligned_cols=10 Identities=0% Similarity=0.494 Sum_probs=5.4
Q ss_pred EEEEeCCCCe
Q psy16880 72 ICMWNLNSKL 81 (84)
Q Consensus 72 i~~~~~~~~~ 81 (84)
+.+||+.+++
T Consensus 31 ~~~~d~~~~~ 40 (49)
T PF13418_consen 31 LWIFDIETNT 40 (49)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCCCE
Confidence 5555665544
No 446
>PF15527 Toxin_47: Putative toxin 47
Probab=36.44 E-value=54 Score=16.14 Aligned_cols=35 Identities=14% Similarity=0.265 Sum_probs=21.9
Q ss_pred CEEEEeCCCCcEEEEeCCCCCC----CCCEEEEEEccCC
Q psy16880 26 HTLISGGDDGSICMWNLNSKLC----DSAVRSISFCSKQ 60 (84)
Q Consensus 26 ~~l~~~~~~~~~~~~d~~~~~~----~~~v~~~~~~~~~ 60 (84)
.-.++++..+.+.++|-...-. +...+.++|.|..
T Consensus 10 ~gvLS~~~s~~vNLyDGt~Y~agGV~qs~PsavS~~PG~ 48 (129)
T PF15527_consen 10 VGVLSASASGVVNLYDGTTYLAGGVAQSNPSAVSWNPGV 48 (129)
T ss_pred eeEEecccceEEEEecCcEeeecceeccCCcceeecCCc
Confidence 3456777777888887543222 4555677787753
No 447
>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]
Probab=36.38 E-value=1.5e+02 Score=20.86 Aligned_cols=27 Identities=26% Similarity=0.364 Sum_probs=15.4
Q ss_pred CCEEEEEEccCCCEEEEecCCCcEEEEeC
Q psy16880 49 SAVRSISFCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 49 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
..|.++.-..+|+.+.+|-.| ..+|.+
T Consensus 182 inV~civs~e~GrIFf~g~~d--~nvyEl 208 (1263)
T COG5308 182 INVRCIVSEEDGRIFFGGEND--PNVYEL 208 (1263)
T ss_pred ceeEEEEeccCCcEEEecCCC--CCeEEE
Confidence 345666555567766666544 555543
No 448
>PHA02713 hypothetical protein; Provisional
Probab=35.92 E-value=1.2e+02 Score=19.42 Aligned_cols=24 Identities=4% Similarity=-0.051 Sum_probs=16.9
Q ss_pred CCCEEEEecCCC--cEEEEeCCCCee
Q psy16880 59 KQRTLISGGDDG--SICMWNLNSKLC 82 (84)
Q Consensus 59 ~~~~~~~~~~~~--~i~~~~~~~~~~ 82 (84)
++++.+.|+.++ .+-.||+.+.++
T Consensus 512 ~~~iyv~Gg~~~~~~~e~yd~~~~~W 537 (557)
T PHA02713 512 DNTIMMLHCYESYMLQDTFNVYTYEW 537 (557)
T ss_pred CCEEEEEeeecceeehhhcCcccccc
Confidence 566777887777 677777776654
No 449
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=35.82 E-value=86 Score=17.77 Aligned_cols=59 Identities=10% Similarity=0.210 Sum_probs=33.0
Q ss_pred ccCCCEEEEeCCCC-cEEEEeCCCCCC----------------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCCee
Q psy16880 22 CSKQHTLISGGDDG-SICMWNLNSKLC----------------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSKLC 82 (84)
Q Consensus 22 ~~~~~~l~~~~~~~-~~~~~d~~~~~~----------------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 82 (84)
-++|+.++.|+... ...+|.-..... ...-..+...|+|++++.+..+ -.+||..+.+.
T Consensus 126 L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~--s~i~d~~~n~v 201 (243)
T PF07250_consen 126 LPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRG--SIIYDYKTNTV 201 (243)
T ss_pred CCCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCC--cEEEeCCCCeE
Confidence 46888888777664 344554321111 1122245557888888877643 44557766543
No 450
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=35.61 E-value=1.4e+02 Score=19.99 Aligned_cols=75 Identities=19% Similarity=0.265 Sum_probs=47.7
Q ss_pred ceEEEeccCCCcCEEEEEEccC---CCEEEEeCCCC-cEEEEeCCCC----------CC---------CCCEEEEEEccC
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSK---QHTLISGGDDG-SICMWNLNSK----------LC---------DSAVRSISFCSK 59 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~-~~~~~d~~~~----------~~---------~~~v~~~~~~~~ 59 (84)
++++.+.-.-...|.||..... ....+.|-.++ ..++-.+... .. ...+-++.+.++
T Consensus 61 KLiwsypi~pt~iV~~~dV~~~~~~~~~~~~glt~rKk~~ll~i~~~~~~~~~~~~~~e~~~~~~~kl~~kvv~Ik~~~~ 140 (670)
T PF10395_consen 61 KLIWSYPISPTTIVECCDVLEKSDGKKLYCVGLTERKKFKLLLIERKVGSTEDGTVNSETTNEFELKLDDKVVGIKFSSD 140 (670)
T ss_pred ceeEeeccCcCceEEEEEeEecCCCcEEEEEEEeeCCeeEEEEEEccCccccccccCccccceEEEEcccceEEEEEecC
Confidence 4555554431455777776543 23555553333 2333333222 00 678889999998
Q ss_pred CCEEEEecCCCcEEEEeC
Q psy16880 60 QRTLISGGDDGSICMWNL 77 (84)
Q Consensus 60 ~~~~~~~~~~~~i~~~~~ 77 (84)
+..+......|.|.+||.
T Consensus 141 ~~~I~vvl~nG~i~~~d~ 158 (670)
T PF10395_consen 141 GKIIYVVLENGSIQIYDF 158 (670)
T ss_pred CCEEEEEEcCCcEEEEec
Confidence 999999999999999998
No 451
>KOG1983|consensus
Probab=35.54 E-value=86 Score=21.83 Aligned_cols=25 Identities=24% Similarity=0.452 Sum_probs=21.7
Q ss_pred ccCCCEEEEecCCCcEEEEeCCCCe
Q psy16880 57 CSKQRTLISGGDDGSICMWNLNSKL 81 (84)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (84)
.+++..++++..|+.+..||...++
T Consensus 243 ~~~~~~~v~~h~Dgs~~fWd~s~g~ 267 (993)
T KOG1983|consen 243 SRDGSHFVSYHTDGSYAFWDVSSGK 267 (993)
T ss_pred ccCCceEEEEEecCCEEeeecCCCc
Confidence 6678899999999999999998764
No 452
>PF11005 DUF2844: Protein of unknown function (DUF2844); InterPro: IPR021267 This bacterial family of proteins has no known function.
Probab=34.84 E-value=68 Score=16.35 Aligned_cols=20 Identities=15% Similarity=0.471 Sum_probs=13.3
Q ss_pred CceEEEeccCCCcCEEEEEEc
Q psy16880 2 GSIIHTFVHSNNSAVRSISFC 22 (84)
Q Consensus 2 g~~~~~~~~~~~~~v~~~~~~ 22 (84)
|..++++-.. .+.|+.++|.
T Consensus 42 Gt~VrEY~~~-~G~VFAvaW~ 61 (132)
T PF11005_consen 42 GTTVREYVTP-DGIVFAVAWQ 61 (132)
T ss_pred CcEEEEEEcC-CCcEEEEEec
Confidence 4456666666 6777777774
No 453
>PF08149 BING4CT: BING4CT (NUC141) domain; InterPro: IPR012952 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This C-terminal domain is found in the BING4 family of nucleolar WD40 repeat proteins [].
Probab=34.72 E-value=54 Score=15.15 Aligned_cols=24 Identities=33% Similarity=0.524 Sum_probs=15.4
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCc
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGS 36 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~ 36 (84)
...|.+++|.|-...|..|...|.
T Consensus 9 ~~~v~~~~F~PfEDvLgvGh~~G~ 32 (80)
T PF08149_consen 9 GSPVESLRFCPFEDVLGVGHSKGF 32 (80)
T ss_pred CCeeeeeEEechHHeeEeeccCce
Confidence 355677777776666666665553
No 454
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=34.34 E-value=44 Score=13.98 Aligned_cols=10 Identities=30% Similarity=0.335 Sum_probs=4.8
Q ss_pred ccCCCEEEEe
Q psy16880 22 CSKQHTLISG 31 (84)
Q Consensus 22 ~~~~~~l~~~ 31 (84)
++++++++.|
T Consensus 39 ~~dg~yli~G 48 (57)
T PF10411_consen 39 DEDGRYLIQG 48 (57)
T ss_dssp ETTSSEEEES
T ss_pred cCCCCEEEEe
Confidence 4455555543
No 455
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=32.99 E-value=1.1e+02 Score=18.31 Aligned_cols=65 Identities=6% Similarity=0.119 Sum_probs=43.0
Q ss_pred EEEEEccCCCEEEEe-CCCCcEEEEeCCCCCC-----------CCCEEEEEEccCCCEEEEecCC---CcEEEEeCCCCe
Q psy16880 17 RSISFCSKQHTLISG-GDDGSICMWNLNSKLC-----------DSAVRSISFCSKQRTLISGGDD---GSICMWNLNSKL 81 (84)
Q Consensus 17 ~~~~~~~~~~~l~~~-~~~~~~~~~d~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~ 81 (84)
..+++.|++..+... ..++.+.+.|...... ......+.+.|++..+...... +.+...|..++.
T Consensus 163 ~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~ 242 (381)
T COG3391 163 TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGN 242 (381)
T ss_pred ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCce
Confidence 678899999855544 4777888888754422 3345678888888766544332 467777766654
No 456
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=32.84 E-value=1.4e+02 Score=19.17 Aligned_cols=18 Identities=22% Similarity=0.375 Sum_probs=13.8
Q ss_pred CCCEEEEEEccCCCEEEE
Q psy16880 48 DSAVRSISFCSKQRTLIS 65 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~ 65 (84)
..++++++|+|+++.+..
T Consensus 501 gaE~tG~~fspDg~tlFv 518 (524)
T PF05787_consen 501 GAEITGPCFSPDGRTLFV 518 (524)
T ss_pred CcccccceECCCCCEEEE
Confidence 667888999988876544
No 457
>PF00843 Arena_nucleocap: Arenavirus nucleocapsid protein; InterPro: IPR000229 Arenaviruses are single stranded RNA viruses. The arenavirus S RNAs that have been characterised include conserved terminal sequences, an ambisense arrangement of the coding regions for the precursor glycoprotein (GPC) and nucleocapsid (N) proteins and an intergenic region capable of forming a base-paired "hairpin" structure. The mature glycoproteins that result are G1 and G2 and the N protein []. This family represents the nucleocapsid protein that encapsulates the viral ssRNA [].; GO: 0019013 viral nucleocapsid; PDB: 3MX5_A 3MX2_C 3MWT_C 3Q7C_A 3MWP_B 3Q7B_A 3T5Q_E 3T5N_A 3R3L_B.
Probab=32.19 E-value=20 Score=22.25 Aligned_cols=15 Identities=20% Similarity=0.742 Sum_probs=6.7
Q ss_pred cCCCcEEEEeCCCCe
Q psy16880 67 GDDGSICMWNLNSKL 81 (84)
Q Consensus 67 ~~~~~i~~~~~~~~~ 81 (84)
..+|.+++||+++..
T Consensus 149 ~~~GVVrvWDvkd~~ 163 (533)
T PF00843_consen 149 GRNGVVRVWDVKDPS 163 (533)
T ss_dssp -SSSEE-SEE-S-GG
T ss_pred CCCCeEEEEecCCHH
Confidence 446667777766543
No 458
>PF14567 SUKH_5: SMI1-KNR4 cell-wall; PDB: 2PAG_A.
Probab=31.69 E-value=79 Score=16.11 Aligned_cols=22 Identities=14% Similarity=0.498 Sum_probs=11.7
Q ss_pred EccCCCEEEEecCCCcEEEEeC
Q psy16880 56 FCSKQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 56 ~~~~~~~~~~~~~~~~i~~~~~ 77 (84)
++.++.-..+...++.|..|..
T Consensus 90 ice~~~~yYcl~~~g~V~~W~~ 111 (132)
T PF14567_consen 90 ICEDGGDYYCLDQEGEVVYWSH 111 (132)
T ss_dssp EEEETTEEEEE-TTS-EEEE--
T ss_pred EEecCCcEEEEeCCCeEEEecC
Confidence 3444455666668888888876
No 459
>PF13964 Kelch_6: Kelch motif
Probab=30.34 E-value=46 Score=13.00 Aligned_cols=9 Identities=0% Similarity=0.209 Sum_probs=4.2
Q ss_pred EEEEeCCCC
Q psy16880 72 ICMWNLNSK 80 (84)
Q Consensus 72 i~~~~~~~~ 80 (84)
+.+||+.+.
T Consensus 30 v~~yd~~t~ 38 (50)
T PF13964_consen 30 VERYDPETN 38 (50)
T ss_pred EEEEcCCCC
Confidence 444454443
No 460
>TIGR01643 YD_repeat_2x YD repeat (two copies). This model describes two tandem copies of a 21-residue extracellular repeat found in Gram-negative, Gram-positive, and animal proteins. The repeat is named for a YD dipeptide, the most strongly conserved motif of the repeat. These repeats appear in general to be involved in binding carbohydrate; the chicken teneurin-1 YD-repeat region has been shown to bind heparin.
Probab=29.94 E-value=43 Score=12.53 Aligned_cols=26 Identities=8% Similarity=0.129 Sum_probs=14.8
Q ss_pred CcCEEEEEEccCCCEEEEeCCCCcEE
Q psy16880 13 NSAVRSISFCSKQHTLISGGDDGSIC 38 (84)
Q Consensus 13 ~~~v~~~~~~~~~~~l~~~~~~~~~~ 38 (84)
.+.+....|...+++...-..++...
T Consensus 14 ~G~~~~~~YD~~Grl~~~tdp~g~~~ 39 (42)
T TIGR01643 14 DGTTTRYTYDAAGRLVEITDADGGST 39 (42)
T ss_pred CCCEEEEEECCCCCEEEEECCCCCEE
Confidence 45566666666666665555554433
No 461
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified []. This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding
Probab=29.55 E-value=48 Score=12.97 Aligned_cols=10 Identities=0% Similarity=0.328 Sum_probs=5.1
Q ss_pred EEEEeCCCCe
Q psy16880 72 ICMWNLNSKL 81 (84)
Q Consensus 72 i~~~~~~~~~ 81 (84)
+.++|+++.+
T Consensus 32 v~~~d~~t~~ 41 (49)
T PF07646_consen 32 VWVFDTETNQ 41 (49)
T ss_pred eEEEECCCCE
Confidence 4555555443
No 462
>KOG4469|consensus
Probab=29.45 E-value=55 Score=18.37 Aligned_cols=22 Identities=14% Similarity=0.271 Sum_probs=14.0
Q ss_pred CCEEEEeCCCCcEEEEeCCCCC
Q psy16880 25 QHTLISGGDDGSICMWNLNSKL 46 (84)
Q Consensus 25 ~~~l~~~~~~~~~~~~d~~~~~ 46 (84)
|..+.++.....+.+|++..+.
T Consensus 199 gerlmaatscrslhlynisdgr 220 (391)
T KOG4469|consen 199 GERLMAATSCRSLHLYNISDGR 220 (391)
T ss_pred hhhhhhhcccceeeeEeecCCC
Confidence 3445556666778888876554
No 463
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=29.22 E-value=2e+02 Score=20.09 Aligned_cols=21 Identities=14% Similarity=0.203 Sum_probs=15.3
Q ss_pred cCEEEEEEccCCCEEEEeCCC
Q psy16880 14 SAVRSISFCSKQHTLISGGDD 34 (84)
Q Consensus 14 ~~v~~~~~~~~~~~l~~~~~~ 34 (84)
+.-..++|-|+|+.+++-..|
T Consensus 247 g~e~~LSWkpqgS~~ati~td 267 (1243)
T COG5290 247 GMEHQLSWKPQGSKYATIGTD 267 (1243)
T ss_pred cchhccccccCCceeeeeccC
Confidence 334568999999998876633
No 464
>KOG3950|consensus
Probab=27.87 E-value=1.3e+02 Score=17.37 Aligned_cols=15 Identities=27% Similarity=0.503 Sum_probs=9.3
Q ss_pred EEEEEEccCCCEEEE
Q psy16880 16 VRSISFCSKQHTLIS 30 (84)
Q Consensus 16 v~~~~~~~~~~~l~~ 30 (84)
++.++.+|+|+++++
T Consensus 262 v~eiCvC~nGkLfLs 276 (292)
T KOG3950|consen 262 VFEICVCPNGKLFLS 276 (292)
T ss_pred EEEEEEecCCcEEEe
Confidence 556666666666653
No 465
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=26.78 E-value=84 Score=14.85 Aligned_cols=23 Identities=17% Similarity=0.211 Sum_probs=15.5
Q ss_pred CCCEEEEEEccCCCEEEEecCCC
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDG 70 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~ 70 (84)
.....+--|.++|+.++++.+++
T Consensus 80 r~~~~~~l~~~~G~LvAs~~Q~~ 102 (104)
T cd03444 80 RGLVEGRIFTRDGELVASVAQEG 102 (104)
T ss_pred eeEEEEEEECCCCCEEEEEEEee
Confidence 33455566788888888876654
No 466
>PF14795 Leucyl-specific: Leucine-tRNA synthetase-specific domain; PDB: 1OBC_A 2BTE_A 2V0G_A 2BYT_A 1OBH_A 1H3N_A 2V0C_A.
Probab=26.74 E-value=61 Score=13.58 Aligned_cols=9 Identities=33% Similarity=1.243 Sum_probs=5.9
Q ss_pred CCCcEEEEe
Q psy16880 68 DDGSICMWN 76 (84)
Q Consensus 68 ~~~~i~~~~ 76 (84)
.||++++|.
T Consensus 47 edG~~h~WK 55 (56)
T PF14795_consen 47 EDGTLHFWK 55 (56)
T ss_dssp TTSSEEEEE
T ss_pred CCCeEeecC
Confidence 466777774
No 467
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=26.54 E-value=1.4e+02 Score=17.23 Aligned_cols=27 Identities=15% Similarity=0.100 Sum_probs=20.9
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEE
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDGSICM 74 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~i~~ 74 (84)
.+...+--|..+|..++++.+++.++.
T Consensus 258 r~~~~g~i~~~~G~LvAs~~Qegl~r~ 284 (286)
T PRK10526 258 RGFVRGEFYTQDGVLVASTVQEGVMRN 284 (286)
T ss_pred ceEEEEEEECCCCCEEEEEEeeEEEEe
Confidence 445566668899999999998887765
No 468
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=26.43 E-value=1.5e+02 Score=17.67 Aligned_cols=65 Identities=12% Similarity=0.033 Sum_probs=38.3
Q ss_pred EEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC---------CCCEEEEEEccCCCEEEEecCCCcEEEEeCCCC
Q psy16880 16 VRSISFCSKQHTLISGGDDGSICMWNLNSKLC---------DSAVRSISFCSKQRTLISGGDDGSICMWNLNSK 80 (84)
Q Consensus 16 v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 80 (84)
-..|+..|+|+...+.-....+...|-..... .+..+.+--.|.++.-++-...+.+..+|..+.
T Consensus 191 pyGi~atpdGsvwyaslagnaiaridp~~~~aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~ 264 (353)
T COG4257 191 PYGICATPDGSVWYASLAGNAIARIDPFAGHAEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVT 264 (353)
T ss_pred CcceEECCCCcEEEEeccccceEEcccccCCcceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccc
Confidence 45677788888887766666666555544322 223344444566666665545566666665543
No 469
>PF13983 YsaB: YsaB-like lipoprotein
Probab=25.60 E-value=79 Score=14.18 Aligned_cols=12 Identities=25% Similarity=0.121 Sum_probs=7.6
Q ss_pred EEEEEccCCCEE
Q psy16880 17 RSISFCSKQHTL 28 (84)
Q Consensus 17 ~~~~~~~~~~~l 28 (84)
+.++|.++|++|
T Consensus 61 FvCSFD~dGqFL 72 (77)
T PF13983_consen 61 FVCSFDADGQFL 72 (77)
T ss_pred eEEeECCCCcEE
Confidence 344677777765
No 470
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=22.98 E-value=2e+02 Score=17.77 Aligned_cols=75 Identities=16% Similarity=0.236 Sum_probs=45.9
Q ss_pred ceEEEeccCCCcCEEEEEEccCCCEEEEeCCCCcEEEEeCCCCCC--------------CCCEEEEEEc--cCC-CEEEE
Q psy16880 3 SIIHTFVHSNNSAVRSISFCSKQHTLISGGDDGSICMWNLNSKLC--------------DSAVRSISFC--SKQ-RTLIS 65 (84)
Q Consensus 3 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~--------------~~~v~~~~~~--~~~-~~~~~ 65 (84)
++++.+.. .+.+..+........|..+-.+.-|.-|+...... ...+-++++- +++ .+++.
T Consensus 199 ~lVR~f~~--~sQ~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLiv 276 (381)
T PF02333_consen 199 TLVREFKV--GSQPEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIV 276 (381)
T ss_dssp EEEEEEE---SS-EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEE
T ss_pred EEEEEecC--CCcceEEEEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEE
Confidence 56777766 46788888888777888887777666666653322 3456666653 233 24444
Q ss_pred ec-CCCcEEEEeCCC
Q psy16880 66 GG-DDGSICMWNLNS 79 (84)
Q Consensus 66 ~~-~~~~i~~~~~~~ 79 (84)
++ .++...+|+...
T Consensus 277 SsQG~~sf~Vy~r~~ 291 (381)
T PF02333_consen 277 SSQGDNSFAVYDREG 291 (381)
T ss_dssp EEGGGTEEEEEESST
T ss_pred EcCCCCeEEEEecCC
Confidence 44 467899998764
No 471
>COG3251 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.48 E-value=95 Score=13.94 Aligned_cols=21 Identities=14% Similarity=0.420 Sum_probs=14.7
Q ss_pred cCCCEEEEeCCCCcEEEEeCC
Q psy16880 23 SKQHTLISGGDDGSICMWNLN 43 (84)
Q Consensus 23 ~~~~~l~~~~~~~~~~~~d~~ 43 (84)
|++.+++..+..+..++|-..
T Consensus 9 ~~~~f~vlvN~e~QySLWP~~ 29 (71)
T COG3251 9 PQGQFYVLVNDEGQYSLWPVF 29 (71)
T ss_pred CCceEEEEEcCccccccchhc
Confidence 456677777778888888553
No 472
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=22.33 E-value=2.1e+02 Score=17.85 Aligned_cols=53 Identities=6% Similarity=0.187 Sum_probs=33.3
Q ss_pred CCEEEEeCCCCcEEEEeCCCCCC-----------CCCEEEEEEcc----CCCEEEEecCCCcEEEEeC
Q psy16880 25 QHTLISGGDDGSICMWNLNSKLC-----------DSAVRSISFCS----KQRTLISGGDDGSICMWNL 77 (84)
Q Consensus 25 ~~~l~~~~~~~~~~~~d~~~~~~-----------~~~v~~~~~~~----~~~~~~~~~~~~~i~~~~~ 77 (84)
...++.|+..|.+++|+...... +.+|-.+..-. .....+.+-+-..+.+|.+
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v 104 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSV 104 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEE
Confidence 35889999999999998854332 55666666432 1223344445566666654
No 473
>KOG1520|consensus
Probab=22.20 E-value=2e+02 Score=17.70 Aligned_cols=37 Identities=8% Similarity=0.192 Sum_probs=24.0
Q ss_pred eCCCCcEEEEeCCCCCC------CCCEEEEEEccCCCEEEEec
Q psy16880 31 GGDDGSICMWNLNSKLC------DSAVRSISFCSKQRTLISGG 67 (84)
Q Consensus 31 ~~~~~~~~~~d~~~~~~------~~~v~~~~~~~~~~~~~~~~ 67 (84)
+..+|.+.-||..+... -.-..+++.+|++..++.+-
T Consensus 195 g~~~GRl~~YD~~tK~~~VLld~L~F~NGlaLS~d~sfvl~~E 237 (376)
T KOG1520|consen 195 GDPTGRLFRYDPSTKVTKVLLDGLYFPNGLALSPDGSFVLVAE 237 (376)
T ss_pred CCCccceEEecCcccchhhhhhcccccccccCCCCCCEEEEEe
Confidence 34566666677665543 22356788899988777663
No 474
>PF09309 FCP1_C: FCP1, C-terminal; InterPro: IPR015388 The C-terminal domain of FCP-1 is required for interaction with the carboxy terminal domain of RAP74. Interaction relies extensively on van der Waals contacts between hydrophobic residues situated within alpha-helices in both domains []. ; PDB: 1ONV_B 1J2X_B.
Probab=21.87 E-value=30 Score=19.51 Aligned_cols=15 Identities=7% Similarity=0.036 Sum_probs=0.0
Q ss_pred CcEEEEeCCCCeecC
Q psy16880 70 GSICMWNLNSKLCDR 84 (84)
Q Consensus 70 ~~i~~~~~~~~~~~~ 84 (84)
-.|++||..+++.|+
T Consensus 54 pEvr~YD~~TGKLIR 68 (263)
T PF09309_consen 54 PEVRIYDPVTGKLIR 68 (263)
T ss_dssp ---------------
T ss_pred CceeeecCcccceee
Confidence 368899999888764
No 475
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=21.53 E-value=2.2e+02 Score=17.83 Aligned_cols=32 Identities=13% Similarity=0.241 Sum_probs=22.7
Q ss_pred CCCEEEEEEccCCCEEEEecCCCcEEEEeCCC
Q psy16880 48 DSAVRSISFCSKQRTLISGGDDGSICMWNLNS 79 (84)
Q Consensus 48 ~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (84)
...-..++..|.++.++....++.+.++.++.
T Consensus 43 ~~~G~~l~vDP~~R~i~v~a~e~~~~v~~l~~ 74 (504)
T PF10433_consen 43 SQPGQYLAVDPSGRCIAVSAYEGNFLVYPLNR 74 (504)
T ss_dssp -TT--EEEE-TTSSEEEEEEBTTEEEEEE-SS
T ss_pred hcCCcEEEECCcCCEEEEEecCCeEEEEEecc
Confidence 34456788899999999998999999987765
No 476
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified []. This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A ....
Probab=21.46 E-value=70 Score=12.07 Aligned_cols=10 Identities=0% Similarity=0.255 Sum_probs=5.4
Q ss_pred EEEEeCCCCe
Q psy16880 72 ICMWNLNSKL 81 (84)
Q Consensus 72 i~~~~~~~~~ 81 (84)
+..||+.+.+
T Consensus 30 v~~yd~~~~~ 39 (47)
T PF01344_consen 30 VEVYDPETNT 39 (47)
T ss_dssp EEEEETTTTE
T ss_pred EEEEeCCCCE
Confidence 5555655544
No 477
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=21.36 E-value=1.8e+02 Score=16.80 Aligned_cols=35 Identities=11% Similarity=0.250 Sum_probs=24.3
Q ss_pred CcCEEEEEEcc------C-CCEEEEeCCCCcEEEEeCCCCCC
Q psy16880 13 NSAVRSISFCS------K-QHTLISGGDDGSICMWNLNSKLC 47 (84)
Q Consensus 13 ~~~v~~~~~~~------~-~~~l~~~~~~~~~~~~d~~~~~~ 47 (84)
...|.||+--. + -+.|+.|..++.+.+.|......
T Consensus 176 ~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~i 217 (257)
T PF14779_consen 176 QTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTI 217 (257)
T ss_pred CceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhhee
Confidence 45667765432 1 25889999999999988765544
No 478
>smart00415 HSF heat shock factor.
Probab=21.22 E-value=1.2e+02 Score=14.50 Aligned_cols=15 Identities=13% Similarity=0.204 Sum_probs=10.7
Q ss_pred EEEEccCCCEEEEeC
Q psy16880 18 SISFCSKQHTLISGG 32 (84)
Q Consensus 18 ~~~~~~~~~~l~~~~ 32 (84)
.+.|+++|..+....
T Consensus 21 iI~W~~~G~~f~I~d 35 (105)
T smart00415 21 IISWSPSGKSFVIWD 35 (105)
T ss_pred EEEECCCCCEEEEcC
Confidence 568998887766543
Done!