Your job contains 1 sequence.
>psy16881
MHEFPMGDGPSLFNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLS
LIMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSA
VTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSN
DKTVTIWDMLATLLASGSNDKTVTIWDMRGNLSVDVPLNYCC
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16881
(222 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 188 1.5e-23 3
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 180 5.9e-21 3
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 209 1.2e-19 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 209 2.6e-19 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 209 2.6e-19 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 209 2.6e-19 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 209 2.6e-19 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 209 2.6e-19 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 209 2.6e-19 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 204 2.9e-19 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 231 4.6e-19 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 231 4.6e-19 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 205 1.3e-18 2
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 225 2.0e-18 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 195 2.5e-18 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 187 2.7e-18 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 183 4.2e-18 2
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 186 2.1e-17 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 192 6.0e-17 2
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 215 6.7e-17 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 215 6.7e-17 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 181 7.3e-17 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 208 1.1e-16 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 214 1.3e-16 1
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 187 1.4e-16 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 193 1.9e-16 2
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 210 2.3e-16 1
UNIPROTKB|B8ZZF2 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 206 4.9e-16 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 170 5.3e-16 2
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 206 6.4e-16 1
CGD|CAL0004039 - symbol:orf19.3301 species:5476 "Candida ... 182 6.6e-16 2
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 181 6.6e-16 2
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 180 7.8e-16 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 192 1.0e-15 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 171 1.2e-15 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 185 1.7e-15 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 167 2.2e-15 2
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 160 3.0e-15 2
UNIPROTKB|Q8NAA4 - symbol:ATG16L2 "Autophagy-related prot... 172 3.6e-15 2
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 170 3.8e-15 2
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 159 6.8e-15 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 172 7.3e-15 2
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 201 7.6e-15 1
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 158 8.7e-15 2
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi... 171 1.1e-14 2
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 157 1.8e-14 2
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 157 1.8e-14 2
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 162 2.1e-14 2
UNIPROTKB|F1P5E8 - symbol:FBXW11 "Uncharacterized protein... 165 2.3e-14 2
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 193 3.1e-14 1
ZFIN|ZDB-GENE-040426-2903 - symbol:fbxw11b "F-box and WD-... 164 3.1e-14 2
ASPGD|ASPL0000005121 - symbol:nudF species:162425 "Emeric... 167 3.3e-14 2
UNIPROTKB|Q00664 - symbol:nudF "Nuclear distribution prot... 167 3.3e-14 2
UNIPROTKB|E1C8E9 - symbol:TAF5L "Uncharacterized protein"... 156 4.0e-14 2
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 155 4.4e-14 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 169 4.5e-14 2
TAIR|locus:2153443 - symbol:AT5G54200 "AT5G54200" species... 179 5.4e-14 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 148 5.6e-14 3
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 188 5.9e-14 1
TAIR|locus:2036823 - symbol:AT1G62020 species:3702 "Arabi... 164 6.0e-14 2
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 186 1.2e-13 1
RGD|1311400 - symbol:Atg16l2 "autophagy related 16-like 2... 162 1.3e-13 2
UNIPROTKB|E3W9A3 - symbol:KATNB1 "Katanin p80 WD40 repeat... 187 1.4e-13 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 182 1.9e-13 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 162 2.9e-13 2
SGD|S000000680 - symbol:TUP1 "General repressor of transc... 159 3.2e-13 2
MGI|MGI:1920933 - symbol:Atg16l2 "autophagy related 16-li... 161 3.7e-13 2
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 139 7.5e-13 3
UNIPROTKB|E1BHK9 - symbol:E1BHK9 "Uncharacterized protein... 151 9.0e-13 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 154 9.2e-13 3
RGD|1359721 - symbol:Btrc "beta-transducin repeat contain... 161 1.0e-12 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 156 1.2e-12 2
ASPGD|ASPL0000014385 - symbol:cpcB species:162425 "Emeric... 159 1.3e-12 2
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 167 1.5e-12 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 167 1.5e-12 1
UNIPROTKB|F1S8U2 - symbol:BTRC "Uncharacterized protein" ... 161 1.6e-12 2
MGI|MGI:1338871 - symbol:Btrc "beta-transducin repeat con... 161 1.8e-12 2
UNIPROTKB|F1LMH8 - symbol:Btrc "Protein Btrc" species:101... 161 1.8e-12 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 172 2.3e-12 1
UNIPROTKB|Q68DS0 - symbol:DKFZp781N011 "Putative uncharac... 161 2.3e-12 2
MGI|MGI:1924290 - symbol:Atg16l1 "autophagy related 16-li... 175 2.3e-12 1
UNIPROTKB|G8JKX8 - symbol:COPB2 "Coatomer subunit beta'" ... 176 2.3e-12 1
UNIPROTKB|F1MVN1 - symbol:BTRC "Uncharacterized protein" ... 161 2.4e-12 2
ZFIN|ZDB-GENE-050417-160 - symbol:wdr38 "WD repeat domain... 150 2.4e-12 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 156 2.5e-12 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 156 2.5e-12 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 156 2.5e-12 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 156 2.5e-12 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 156 2.5e-12 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 156 2.5e-12 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 156 2.5e-12 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 156 2.5e-12 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 156 2.5e-12 2
UNIPROTKB|E2RDC4 - symbol:BTRC "Uncharacterized protein" ... 161 2.9e-12 2
UNIPROTKB|Q9Y297 - symbol:BTRC "F-box/WD repeat-containin... 161 2.9e-12 2
UNIPROTKB|F1NYG1 - symbol:BTRC "Uncharacterized protein" ... 161 2.9e-12 2
UNIPROTKB|B4DZI8 - symbol:COPB2 "Coatomer protein complex... 176 3.2e-12 1
ZFIN|ZDB-GENE-041114-104 - symbol:tbl3 "transducin (beta)... 176 3.3e-12 1
MGI|MGI:1354962 - symbol:Copb2 "coatomer protein complex,... 176 3.3e-12 1
UNIPROTKB|P35605 - symbol:COPB2 "Coatomer subunit beta'" ... 176 3.3e-12 1
WARNING: Descriptions of 912 database sequences were not reported due to the
limiting value of parameter V = 100.
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 188 (71.2 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 53/163 (32%), Positives = 77/163 (47%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V FSPD +LLA+G ++T+ +W S L HT G W +P R+
Sbjct: 161 VAFSPDGQLLASGSAEKTIKLWDSATCGL-------KHTLGGHSNWV-LPLVFSPDGRLL 212
Query: 93 STFVKQI-IPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
++ I G T+ H++ + S+ F+ LL SGS D T+KLWD + +
Sbjct: 213 ASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGS 272
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLL 194
TL+ H+ V FS D LL SGS D T+ +WD +L
Sbjct: 273 FRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGIL 315
Score = 175 (66.7 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 40/83 (48%), Positives = 50/83 (60%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC-IK-TLESHTRYVTC 165
G T+ H+ V SV F+ LL SGS +KT+KLWD S TC +K TL H+ +V
Sbjct: 145 GSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD--SATCGLKHTLGGHSNWVLP 202
Query: 166 CTFSCDDSLLASGSNDKTVTIWD 188
FS D LLASGSND T+ +WD
Sbjct: 203 LVFSPDGRLLASGSNDATIKLWD 225
Score = 159 (61.0 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 36/102 (35%), Positives = 57/102 (55%)
Query: 107 YGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCC 166
+G + +T+ H+ + +V F+ LL SGS D T+KLWD S +TLE H+ V
Sbjct: 30 WGPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSV 89
Query: 167 TFSCDDSLLASGSNDKTVTIWDMLATLLA---SGSNDKTVTI 205
FS + LLASGS+D T+ +W+ + L G +D+ ++
Sbjct: 90 AFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESV 131
Score = 142 (55.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 40/107 (37%), Positives = 57/107 (53%)
Query: 112 ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD 171
+T+ H+S+V SV F+ LL SGS D T+KLW+ S + T+E H+ V FS +
Sbjct: 77 QTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPN 136
Query: 172 DSLL--ASGSNDKTV---TIWDMLAT------LLASGSNDKTVTIWD 207
L A GS T+ + W + LLASGS +KT+ +WD
Sbjct: 137 GQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD 183
Score = 83 (34.3 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 15 GTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRS--DDLSLIMETNDRGHTQ 72
G + L G H S+++ V FSP+ +LLA+G D T+ +W S D L ME GH+
Sbjct: 74 GLKQTLEG--H-SSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTME----GHSD 126
Query: 73 GRIE 76
R+E
Sbjct: 127 -RVE 129
Score = 58 (25.5 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 193 LLASGSNDKTVTIWD 207
LLASGS+D T+ +WD
Sbjct: 253 LLASGSSDATIKLWD 267
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 180 (68.4 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 50/165 (30%), Positives = 76/165 (46%)
Query: 23 SVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVP 82
S HI +RC RFSPD RL+A+ DD+TV +W I + G +E P
Sbjct: 143 SQHINW-VRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFH---P 198
Query: 83 ACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTV 142
+ C + ++ R+ Q + HT+AV S+ F+ + L++ S D T+
Sbjct: 199 S-GTCIAAAGTDKTVKVWDVRMNRLLQHYQV---HTAAVNSLSFHPSGNYLITASNDSTL 254
Query: 143 KLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
K+ D+ + TL H TC FS ASG +D+ V +W
Sbjct: 255 KILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 162 (62.1 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 110 DSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFS 169
+S HT+ V SV F+ LV+ S DKT+K+W V + +L H +V C FS
Sbjct: 96 ESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFS 155
Query: 170 CDDSLLASGSNDKTVTIWD 188
D L+AS S+DKTV +WD
Sbjct: 156 PDGRLIASASDDKTVKLWD 174
Score = 134 (52.2 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 29/71 (40%), Positives = 37/71 (52%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H A+TSV F+ L SGS+D +K+W + L H V C FS L+A
Sbjct: 19 HRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVA 78
Query: 177 SGSNDKTVTIW 187
SGS DKTV +W
Sbjct: 79 SGSRDKTVCLW 89
Score = 133 (51.9 bits), Expect = 9.8e-11, Sum P(3) = 9.8e-11
Identities = 33/75 (44%), Positives = 44/75 (58%)
Query: 114 VGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTL-ESHTRYVTCCTFSCDD 172
VG H AV V+F+ L+ SGS DKTV LW VPS+ T+ ++HT V FS D
Sbjct: 59 VG-HKDAVMCVQFSPSGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDG 116
Query: 173 SLLASGSNDKTVTIW 187
L + S+DKT+ +W
Sbjct: 117 QSLVTASDDKTIKVW 131
Score = 132 (51.5 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
++ +H + V RF+ L+ S S DKTVKLWD S CI + H + F
Sbjct: 141 SLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSG 200
Query: 173 SLLASGSNDKTVTIWDM 189
+ +A+ DKTV +WD+
Sbjct: 201 TCIAAAGTDKTVKVWDV 217
Score = 107 (42.7 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V F+ + + + DKTVK+WDV ++ + HT V +F + L
Sbjct: 187 HGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLI 246
Query: 177 SGSNDKTVTIWDML 190
+ SND T+ I D+L
Sbjct: 247 TASNDSTLKILDLL 260
Score = 70 (29.7 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
CV+FSP L+A+G D+TV +W
Sbjct: 67 CVQFSPSGHLVASGSRDKTVCLW 89
Score = 66 (28.3 bits), Expect = 3.7e-11, Sum P(3) = 3.7e-11
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVW 54
+ +R V FS D + L T DD+T+ VW
Sbjct: 105 ATVRSVHFSSDGQSLVTASDDKTIKVW 131
Score = 59 (25.8 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 192 TLLASGSNDKTVTIWDMRGN 211
T +A+ DKTV +WD+R N
Sbjct: 201 TCIAAAGTDKTVKVWDVRMN 220
Score = 57 (25.1 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 193 LLASGSNDKTVTIWD 207
L+AS S+DKTV +WD
Sbjct: 160 LIASASDDKTVKLWD 174
Score = 42 (19.8 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 194 LASGSNDKTVTIW 206
L + S+DKT+ +W
Sbjct: 119 LVTASDDKTIKVW 131
Score = 40 (19.1 bits), Expect = 7.0e-18, Sum P(3) = 7.0e-18
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 33 VRFSPDTRLLATGGDDETVTVW 54
V FS + + LA+G D + +W
Sbjct: 26 VDFSLNKKQLASGSMDSCLKIW 47
Score = 39 (18.8 bits), Expect = 6.6e-19, Sum P(3) = 6.6e-19
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 183 TVTIWDMLATLLASGSNDKTVTIW 206
T + ASG +D+ V +W
Sbjct: 276 TCVAFSRTGDFFASGGSDEQVMVW 299
Score = 36 (17.7 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 194 LASGSNDKTVTIWDM-RGNL 212
L + SND T+ I D+ G L
Sbjct: 245 LITASNDSTLKILDLLEGRL 264
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 209 (78.6 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 105 GVY-GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
G Y G+ +T+ H ++ V ++ S+LLVS S DKT+K+WDV S C+KTL+ H+ YV
Sbjct: 47 GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 106
Query: 164 TCCTFSCDDSLLASGSNDKTVTIWDM 189
CC F+ +L+ SGS D++V IWD+
Sbjct: 107 FCCNFNPQSNLIVSGSFDESVRIWDV 132
Score = 176 (67.0 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 50/157 (31%), Positives = 80/157 (50%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPACPLCRTRV 91
V+FSP+ LA+ D+ + +W + D E GH G + W V
Sbjct: 25 VKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDS-----NLLV 77
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
++ K + V G+ +T+ H++ V FN +S+L+VSGS D++V++WDV +
Sbjct: 78 SASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 136
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
C+KTL +H+ V+ F+ D SL+ S S D IWD
Sbjct: 137 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 173
Score = 148 (57.2 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ HT AV+SV+F+ L S S DK +K+W KT+ H ++ +S D
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 73
Query: 173 SLLASGSNDKTVTIWDM 189
+LL S S+DKT+ IWD+
Sbjct: 74 NLLVSASDDKTLKIWDV 90
Score = 145 (56.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V +S D+ LL + DD+T+ +W ++T +GH+ + P L + F
Sbjct: 67 VAWSSDSNLLVSASDDKTLKIWDVSS-GKCLKTL-KGHSN-YVFCCNFNPQSNLIVSGSF 123
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
V+ I + G + +T+ H+ V++V FN SL+VS S D ++WD S C
Sbjct: 124 DESVR-IWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 179
Query: 153 IKTL-ESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+KTL + V+ FS + + + + D T+ +WD
Sbjct: 180 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 216
Score = 107 (42.7 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 121 VTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHT--RYVTCCTFSCDDSL-LAS 177
V+ V+F+ +++ ++D T+KLWD C+KT H +Y FS + S
Sbjct: 191 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 250
Query: 178 GSNDKTVTIWDM 189
GS D V IW++
Sbjct: 251 GSEDNLVYIWNL 262
Score = 91 (37.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGS--NDKTVTIW 187
+VSGS D V +W++ + ++ L+ HT V ++++AS + NDKT+ +W
Sbjct: 248 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 62 (26.9 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
C F+P + L+ +G DE+V +W
Sbjct: 108 CCNFNPQSNLIVSGSFDESVRIW 130
Score = 53 (23.7 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
+ L+ SGS D++V IWD++
Sbjct: 115 SNLIVSGSFDESVRIWDVK 133
Score = 39 (18.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 193 LLASGS--NDKTVTIW 206
++AS + NDKT+ +W
Sbjct: 289 IIASAALENDKTIKLW 304
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 209 (78.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 105 GVY-GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
G Y G+ +T+ H ++ V ++ S+LLVS S DKT+K+WDV S C+KTL+ H+ YV
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 164 TCCTFSCDDSLLASGSNDKTVTIWDM 189
CC F+ +L+ SGS D++V IWD+
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 176 (67.0 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 50/157 (31%), Positives = 80/157 (50%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPACPLCRTRV 91
V+FSP+ LA+ D+ + +W + D E GH G + W V
Sbjct: 51 VKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDS-----NLLV 103
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
++ K + V G+ +T+ H++ V FN +S+L+VSGS D++V++WDV +
Sbjct: 104 SASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
C+KTL +H+ V+ F+ D SL+ S S D IWD
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 148 (57.2 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ HT AV+SV+F+ L S S DK +K+W KT+ H ++ +S D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 173 SLLASGSNDKTVTIWDM 189
+LL S S+DKT+ IWD+
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 145 (56.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V +S D+ LL + DD+T+ +W ++T +GH+ + P L + F
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSS-GKCLKTL-KGHSN-YVFCCNFNPQSNLIVSGSF 149
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
V+ I + G + +T+ H+ V++V FN SL+VS S D ++WD S C
Sbjct: 150 DESVR-IWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 205
Query: 153 IKTL-ESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+KTL + V+ FS + + + + D T+ +WD
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 107 (42.7 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 121 VTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHT--RYVTCCTFSCDDSL-LAS 177
V+ V+F+ +++ ++D T+KLWD C+KT H +Y FS + S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 178 GSNDKTVTIWDM 189
GS D V IW++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 91 (37.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGS--NDKTVTIW 187
+VSGS D V +W++ + ++ L+ HT V ++++AS + NDKT+ +W
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 62 (26.9 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
C F+P + L+ +G DE+V +W
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIW 156
Score = 53 (23.7 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
+ L+ SGS D++V IWD++
Sbjct: 141 SNLIVSGSFDESVRIWDVK 159
Score = 39 (18.8 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 193 LLASGS--NDKTVTIW 206
++AS + NDKT+ +W
Sbjct: 315 IIASAALENDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 209 (78.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 105 GVY-GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
G Y G+ +T+ H ++ V ++ S+LLVS S DKT+K+WDV S C+KTL+ H+ YV
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 164 TCCTFSCDDSLLASGSNDKTVTIWDM 189
CC F+ +L+ SGS D++V IWD+
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 176 (67.0 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 50/157 (31%), Positives = 80/157 (50%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPACPLCRTRV 91
V+FSP+ LA+ D+ + +W + D E GH G + W V
Sbjct: 51 VKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDS-----NLLV 103
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
++ K + V G+ +T+ H++ V FN +S+L+VSGS D++V++WDV +
Sbjct: 104 SASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
C+KTL +H+ V+ F+ D SL+ S S D IWD
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 148 (57.2 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ HT AV+SV+F+ L S S DK +K+W KT+ H ++ +S D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 173 SLLASGSNDKTVTIWDM 189
+LL S S+DKT+ IWD+
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 145 (56.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V +S D+ LL + DD+T+ +W ++T +GH+ + P L + F
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSS-GKCLKTL-KGHSN-YVFCCNFNPQSNLIVSGSF 149
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
V+ I + G + +T+ H+ V++V FN SL+VS S D ++WD S C
Sbjct: 150 DESVR-IWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 205
Query: 153 IKTL-ESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+KTL + V+ FS + + + + D T+ +WD
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 107 (42.7 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 121 VTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHT--RYVTCCTFSCDDSL-LAS 177
V+ V+F+ +++ ++D T+KLWD C+KT H +Y FS + S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 178 GSNDKTVTIWDM 189
GS D V IW++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 91 (37.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGS--NDKTVTIW 187
+VSGS D V +W++ + ++ L+ HT V ++++AS + NDKT+ +W
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 62 (26.9 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
C F+P + L+ +G DE+V +W
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIW 156
Score = 53 (23.7 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
+ L+ SGS D++V IWD++
Sbjct: 141 SNLIVSGSFDESVRIWDVK 159
Score = 39 (18.8 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 193 LLASGS--NDKTVTIW 206
++AS + NDKT+ +W
Sbjct: 315 IIASAALENDKTIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 209 (78.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 105 GVY-GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
G Y G+ +T+ H ++ V ++ S+LLVS S DKT+K+WDV S C+KTL+ H+ YV
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 164 TCCTFSCDDSLLASGSNDKTVTIWDM 189
CC F+ +L+ SGS D++V IWD+
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 176 (67.0 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 50/157 (31%), Positives = 80/157 (50%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPACPLCRTRV 91
V+FSP+ LA+ D+ + +W + D E GH G + W V
Sbjct: 51 VKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDS-----NLLV 103
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
++ K + V G+ +T+ H++ V FN +S+L+VSGS D++V++WDV +
Sbjct: 104 SASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
C+KTL +H+ V+ F+ D SL+ S S D IWD
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 148 (57.2 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ HT AV+SV+F+ L S S DK +K+W KT+ H ++ +S D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 173 SLLASGSNDKTVTIWDM 189
+LL S S+DKT+ IWD+
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 145 (56.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V +S D+ LL + DD+T+ +W ++T +GH+ + P L + F
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSS-GKCLKTL-KGHSN-YVFCCNFNPQSNLIVSGSF 149
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
V+ I + G + +T+ H+ V++V FN SL+VS S D ++WD S C
Sbjct: 150 DESVR-IWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 205
Query: 153 IKTL-ESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+KTL + V+ FS + + + + D T+ +WD
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 107 (42.7 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 121 VTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHT--RYVTCCTFSCDDSL-LAS 177
V+ V+F+ +++ ++D T+KLWD C+KT H +Y FS + S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 178 GSNDKTVTIWDM 189
GS D V IW++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 91 (37.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGS--NDKTVTIW 187
+VSGS D V +W++ + ++ L+ HT V ++++AS + NDKT+ +W
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 62 (26.9 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
C F+P + L+ +G DE+V +W
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIW 156
Score = 53 (23.7 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
+ L+ SGS D++V IWD++
Sbjct: 141 SNLIVSGSFDESVRIWDVK 159
Score = 39 (18.8 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 193 LLASGS--NDKTVTIW 206
++AS + NDKT+ +W
Sbjct: 315 IIASAALENDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 209 (78.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 105 GVY-GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
G Y G+ +T+ H ++ V ++ S+LLVS S DKT+K+WDV S C+KTL+ H+ YV
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 164 TCCTFSCDDSLLASGSNDKTVTIWDM 189
CC F+ +L+ SGS D++V IWD+
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 176 (67.0 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 50/157 (31%), Positives = 80/157 (50%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPACPLCRTRV 91
V+FSP+ LA+ D+ + +W + D E GH G + W V
Sbjct: 51 VKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDS-----NLLV 103
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
++ K + V G+ +T+ H++ V FN +S+L+VSGS D++V++WDV +
Sbjct: 104 SASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
C+KTL +H+ V+ F+ D SL+ S S D IWD
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 148 (57.2 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ HT AV+SV+F+ L S S DK +K+W KT+ H ++ +S D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 173 SLLASGSNDKTVTIWDM 189
+LL S S+DKT+ IWD+
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 145 (56.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V +S D+ LL + DD+T+ +W ++T +GH+ + P L + F
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSS-GKCLKTL-KGHSN-YVFCCNFNPQSNLIVSGSF 149
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
V+ I + G + +T+ H+ V++V FN SL+VS S D ++WD S C
Sbjct: 150 DESVR-IWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 205
Query: 153 IKTL-ESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+KTL + V+ FS + + + + D T+ +WD
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 107 (42.7 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 121 VTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHT--RYVTCCTFSCDDSL-LAS 177
V+ V+F+ +++ ++D T+KLWD C+KT H +Y FS + S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 178 GSNDKTVTIWDM 189
GS D V IW++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 91 (37.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGS--NDKTVTIW 187
+VSGS D V +W++ + ++ L+ HT V ++++AS + NDKT+ +W
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 62 (26.9 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
C F+P + L+ +G DE+V +W
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIW 156
Score = 53 (23.7 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
+ L+ SGS D++V IWD++
Sbjct: 141 SNLIVSGSFDESVRIWDVK 159
Score = 39 (18.8 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 193 LLASGS--NDKTVTIW 206
++AS + NDKT+ +W
Sbjct: 315 IIASAALENDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 209 (78.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 105 GVY-GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
G Y G+ +T+ H ++ V ++ S+LLVS S DKT+K+WDV S C+KTL+ H+ YV
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 164 TCCTFSCDDSLLASGSNDKTVTIWDM 189
CC F+ +L+ SGS D++V IWD+
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 176 (67.0 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 50/157 (31%), Positives = 80/157 (50%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPACPLCRTRV 91
V+FSP+ LA+ D+ + +W + D E GH G + W V
Sbjct: 51 VKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDS-----NLLV 103
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
++ K + V G+ +T+ H++ V FN +S+L+VSGS D++V++WDV +
Sbjct: 104 SASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
C+KTL +H+ V+ F+ D SL+ S S D IWD
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 148 (57.2 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ HT AV+SV+F+ L S S DK +K+W KT+ H ++ +S D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 173 SLLASGSNDKTVTIWDM 189
+LL S S+DKT+ IWD+
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 145 (56.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V +S D+ LL + DD+T+ +W ++T +GH+ + P L + F
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSS-GKCLKTL-KGHSN-YVFCCNFNPQSNLIVSGSF 149
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
V+ I + G + +T+ H+ V++V FN SL+VS S D ++WD S C
Sbjct: 150 DESVR-IWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 205
Query: 153 IKTL-ESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+KTL + V+ FS + + + + D T+ +WD
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 107 (42.7 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 121 VTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHT--RYVTCCTFSCDDSL-LAS 177
V+ V+F+ +++ ++D T+KLWD C+KT H +Y FS + S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 178 GSNDKTVTIWDM 189
GS D V IW++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 91 (37.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGS--NDKTVTIW 187
+VSGS D V +W++ + ++ L+ HT V ++++AS + NDKT+ +W
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 62 (26.9 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
C F+P + L+ +G DE+V +W
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIW 156
Score = 53 (23.7 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
+ L+ SGS D++V IWD++
Sbjct: 141 SNLIVSGSFDESVRIWDVK 159
Score = 39 (18.8 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 193 LLASGS--NDKTVTIW 206
++AS + NDKT+ +W
Sbjct: 315 IIASAALENDKTIKLW 330
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 209 (78.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 105 GVY-GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
G Y G+ +T+ H ++ V ++ S+LLVS S DKT+K+WDV S C+KTL+ H+ YV
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 164 TCCTFSCDDSLLASGSNDKTVTIWDM 189
CC F+ +L+ SGS D++V IWD+
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDV 158
Score = 176 (67.0 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 50/157 (31%), Positives = 80/157 (50%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPACPLCRTRV 91
V+FSP+ LA+ D+ + +W + D E GH G + W V
Sbjct: 51 VKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDS-----NLLV 103
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
++ K + V G+ +T+ H++ V FN +S+L+VSGS D++V++WDV +
Sbjct: 104 SASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
C+KTL +H+ V+ F+ D SL+ S S D IWD
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 148 (57.2 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ HT AV+SV+F+ L S S DK +K+W KT+ H ++ +S D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 173 SLLASGSNDKTVTIWDM 189
+LL S S+DKT+ IWD+
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 145 (56.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V +S D+ LL + DD+T+ +W ++T +GH+ + P L + F
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSS-GKCLKTL-KGHSN-YVFCCNFNPQSNLIVSGSF 149
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
V+ I + G + +T+ H+ V++V FN SL+VS S D ++WD S C
Sbjct: 150 DESVR-IWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 205
Query: 153 IKTL-ESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+KTL + V+ FS + + + + D T+ +WD
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 106 (42.4 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 121 VTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHT--RYVTCCTFSCDDSL-LAS 177
V+ V+F+ +++ ++D T+KLWD C+KT H +Y FS + S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVS 276
Query: 178 GSNDKTVTIWDM 189
GS D V IW++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 91 (37.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGS--NDKTVTIW 187
+VSGS D V +W++ + ++ L+ HT V ++++AS + NDKT+ +W
Sbjct: 274 IVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 62 (26.9 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
C F+P + L+ +G DE+V +W
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIW 156
Score = 53 (23.7 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
+ L+ SGS D++V IWD++
Sbjct: 141 SNLIVSGSFDESVRIWDVK 159
Score = 39 (18.8 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 193 LLASGS--NDKTVTIW 206
++AS + NDKT+ +W
Sbjct: 315 IIASAALENDKTIKLW 330
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 204 (76.9 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 57/158 (36%), Positives = 81/158 (51%)
Query: 40 RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ--GRIE---GWGRVPACPLCRT-RVFS 93
RLLATGG+D V +W + IM GHT G I+ RV A L + R++
Sbjct: 34 RLLATGGEDCRVNIWAVSKPNCIMSLT--GHTSAVGCIQFNSSEERVVAGSLSGSLRLWD 91
Query: 94 TFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCI 153
+I+ T +G H ++++S+ F+ L SGSVD +KLWDV C+
Sbjct: 92 LEAAKILRTLMG-----------HKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCV 140
Query: 154 KTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLA 191
+ HT+ V C FS D LAS S+D TV +WD++A
Sbjct: 141 FRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIA 178
Score = 145 (56.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 34/86 (39%), Positives = 45/86 (52%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
HT AV + F+ L S S D TVKLWD+ + I SHT V F ++ LLA
Sbjct: 146 HTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLA 205
Query: 177 SGSNDKTVTIWDMLATLLASGSNDKT 202
SGS D+TV +WD+ + S +T
Sbjct: 206 SGSADRTVKLWDLEKFNMIGSSEGET 231
Score = 137 (53.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/171 (29%), Positives = 74/171 (43%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW 78
ILR + +++ + F P LA+G D + +W + +GHTQ +
Sbjct: 97 ILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRY--KGHTQA-VRCL 153
Query: 79 GRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSV 138
P + + VK + + G+ HTSAV V+F+ LL SGS
Sbjct: 154 AFSPDGKWLASASDDSTVK--LWDLIA--GKMITEFTSHTSAVNVVQFHPNEYLLASGSA 209
Query: 139 DKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGS-NDKTVTIWD 188
D+TVKLWD+ I + E T V F+ D S L SGS N V W+
Sbjct: 210 DRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYGWE 260
Score = 113 (44.8 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 117 HTSAVTSVRFNHKSS-LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL 175
H+S V+S+ S LL +G D V +W V CI +L HT V C F+ + +
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERV 78
Query: 176 ASGSNDKTVTIWDMLA 191
+GS ++ +WD+ A
Sbjct: 79 VAGSLSGSLRLWDLEA 94
Score = 61 (26.5 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 193 LLASGSNDKTVTIWDM 208
LLASGS D+TV +WD+
Sbjct: 203 LLASGSADRTVKLWDL 218
Score = 52 (23.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 194 LASGSNDKTVTIWDM 208
LAS S+D TV +WD+
Sbjct: 162 LASASDDSTVKLWDL 176
Score = 52 (23.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 194 LASGSNDKTVTIWDMR 209
LASGS D + +WD+R
Sbjct: 120 LASGSVDSNIKLWDVR 135
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 231 (86.4 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 56/156 (35%), Positives = 87/156 (55%)
Query: 34 RFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPACPLCRTRVF 92
+FSP + L T D+TV +W D + I E GH G + W C + +
Sbjct: 94 KFSPCGKYLGTSSADKTVKIWNMDHM--ICERTLTGHKLGVNDIAWSSDSRCVVSASDDK 151
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
+ + +I+ +R+ ++T+ H + V FN +SSL+VSGS D++V++WDV + C
Sbjct: 152 TLKIFEIVTSRM------TKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMC 205
Query: 153 IKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
IKTL +H+ V+ +F+ D SL+ASGS D V IWD
Sbjct: 206 IKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 156 (60.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V + ++ S +VS S DKT+K++++ + KTL+ H YV CC F+
Sbjct: 124 TLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS 183
Query: 173 SLLASGSNDKTVTIWDM 189
SL+ SGS D++V IWD+
Sbjct: 184 SLVVSGSFDESVRIWDV 200
Score = 141 (54.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 42/157 (26%), Positives = 76/157 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
+ +S D+R + + DD+T+ ++ + ++ M +GH + P L + F
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIF--EIVTSRMTKTLKGHNN-YVFCCNFNPQSSLVVSGSF 191
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
V+ I + G+ +T+ H+ V++V FN SL+ SGS D V++WD + C
Sbjct: 192 DESVR-IWDVKTGMC---IKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC 247
Query: 153 IKTL-ESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
IKTL + V FS + + + + D T+ +WD
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 134 (52.2 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ HT +++S +F+ L + S DKTVK+W++ + C +TL H V +S D
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+ S S+DKT+ I++++ +
Sbjct: 142 RCVVSASDDKTLKIFEIVTS 161
Score = 89 (36.4 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 108 GQDSET-VGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESH--TRYVT 164
GQ +T V V V+F+ +++ ++D T+KLWD +K H ++Y
Sbjct: 245 GQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCI 304
Query: 165 CCTFSCDDSL-LASGSNDKTVTIWDM 189
FS + SGS D + IW++
Sbjct: 305 FANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 60 (26.2 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
C F+P + L+ +G DE+V +W
Sbjct: 176 CCNFNPQSSLVVSGSFDESVRIW 198
Score = 55 (24.4 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 191 ATLLASGSNDKTVTIWDMRGNLSV 214
++L+ SGS D++V IWD++ + +
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCI 206
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 231 (86.4 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 56/156 (35%), Positives = 87/156 (55%)
Query: 34 RFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPACPLCRTRVF 92
+FSP + L T D+TV +W D + I E GH G + W C + +
Sbjct: 94 KFSPCGKYLGTSSADKTVKIWNMDHM--ICERTLTGHKLGVNDIAWSSDSRCVVSASDDK 151
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
+ + +I+ +R+ ++T+ H + V FN +SSL+VSGS D++V++WDV + C
Sbjct: 152 TLKIFEIVTSRM------TKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMC 205
Query: 153 IKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
IKTL +H+ V+ +F+ D SL+ASGS D V IWD
Sbjct: 206 IKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 156 (60.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V + ++ S +VS S DKT+K++++ + KTL+ H YV CC F+
Sbjct: 124 TLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS 183
Query: 173 SLLASGSNDKTVTIWDM 189
SL+ SGS D++V IWD+
Sbjct: 184 SLVVSGSFDESVRIWDV 200
Score = 141 (54.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 42/157 (26%), Positives = 76/157 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
+ +S D+R + + DD+T+ ++ + ++ M +GH + P L + F
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIF--EIVTSRMTKTLKGHNN-YVFCCNFNPQSSLVVSGSF 191
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
V+ I + G+ +T+ H+ V++V FN SL+ SGS D V++WD + C
Sbjct: 192 DESVR-IWDVKTGMC---IKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC 247
Query: 153 IKTL-ESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
IKTL + V FS + + + + D T+ +WD
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 134 (52.2 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ HT +++S +F+ L + S DKTVK+W++ + C +TL H V +S D
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+ S S+DKT+ I++++ +
Sbjct: 142 RCVVSASDDKTLKIFEIVTS 161
Score = 89 (36.4 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 108 GQDSET-VGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESH--TRYVT 164
GQ +T V V V+F+ +++ ++D T+KLWD +K H ++Y
Sbjct: 245 GQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCI 304
Query: 165 CCTFSCDDSL-LASGSNDKTVTIWDM 189
FS + SGS D + IW++
Sbjct: 305 FANFSVTGGKWIISGSEDCKIYIWNL 330
Score = 60 (26.2 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
C F+P + L+ +G DE+V +W
Sbjct: 176 CCNFNPQSSLVVSGSFDESVRIW 198
Score = 55 (24.4 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 191 ATLLASGSNDKTVTIWDMRGNLSV 214
++L+ SGS D++V IWD++ + +
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCI 206
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 205 (77.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 55/176 (31%), Positives = 94/176 (53%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPACPLCRTR 90
CV+FS D LLA+ D+T+ +W + + SLI GH+ G + W + C
Sbjct: 48 CVKFSNDGNLLASASVDKTMILWSATNYSLIHRYE--GHSSGISDLAWSS-DSHYTCSAS 104
Query: 91 VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSL 150
T +I R Y + + + HT+ V V FN S+L+VSGS D+T+++W+V +
Sbjct: 105 DDCTL--RIWDAR-SPY-ECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTG 160
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML-ATLLASGSNDKTVTI 205
C++ +++H+ ++ F+ D SL+ S S+D + IWD T L + +DK+ +
Sbjct: 161 KCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAV 216
Score = 142 (55.0 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 28/77 (36%), Positives = 46/77 (59%)
Query: 112 ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD 171
+T+ HT+A++ V+F++ +LL S SVDKT+ LW + + I E H+ ++ +S D
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 172 DSLLASGSNDKTVTIWD 188
S S+D T+ IWD
Sbjct: 97 SHYTCSASDDCTLRIWD 113
Score = 122 (48.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 46/170 (27%), Positives = 75/170 (44%)
Query: 18 LILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEG 77
LI R H S + + +S D+ + DD T+ +W + ++ RGHT
Sbjct: 77 LIHRYEGH-SSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVL-RGHTNFVF-- 132
Query: 78 WGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGS 137
V P V +F + I V G+ + H+ ++SV FN SL+VS S
Sbjct: 133 --CVNFNPPSNLIVSGSFDETIRIWEVKT-GKCVRMIKAHSMPISSVHFNRDGSLIVSAS 189
Query: 138 VDKTVKLWDVPSLTCIKTL-ESHTRYVTCCTFSCDDSLLASGSNDKTVTI 186
D + K+WD TC+KTL + + V+ FS + + + D T+ +
Sbjct: 190 HDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKL 239
Score = 52 (23.4 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
+ L+ SGS D+T+ IW+++
Sbjct: 140 SNLIVSGSFDETIRIWEVK 158
Score = 41 (19.5 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 192 TLLASGSNDKTVTIWDMR 209
+L+ S S+D + IWD +
Sbjct: 183 SLIVSASHDGSCKIWDAK 200
Score = 37 (18.1 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 195 ASGSN-DKTVTIW 206
+SG++ DKT+ IW
Sbjct: 317 SSGNHLDKTIRIW 329
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 225 (84.3 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 63/175 (36%), Positives = 92/175 (52%)
Query: 15 GTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGR 74
G +LI H S + V+FSP + L T D+TV +W DLS E GH G
Sbjct: 68 GYKLISTIEGHTKS-ISAVKFSPCGKFLGTSSADKTVKIWNMSDLSC--ERTLTGHKLGV 124
Query: 75 IE-GWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL 133
+ W + + T +PT V + ++T+ HT+ V FN +SSL+
Sbjct: 125 NDFAWS-ADSKSIVTASDDKTLKIYEVPT-VKM----AKTLKGHTNYVFCCNFNPQSSLV 178
Query: 134 VSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
VSGS D++V++WDV + C+KTL +H+ V+ +F+ D SL+ SGS D V IWD
Sbjct: 179 VSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWD 233
Score = 168 (64.2 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V ++ S +V+ S DKT+K+++VP++ KTL+ HT YV CC F+
Sbjct: 116 TLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQS 175
Query: 173 SLLASGSNDKTVTIWDM 189
SL+ SGS D++V IWD+
Sbjct: 176 SLVVSGSFDESVRIWDV 192
Score = 152 (58.6 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 44/155 (28%), Positives = 74/155 (47%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFST 94
+S D++ + T DD+T+ ++ + M +GHT + P L + F
Sbjct: 129 WSADSKSIVTASDDKTLKIYEVPTVK--MAKTLKGHTN-YVFCCNFNPQSSLVVSGSFDE 185
Query: 95 FVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIK 154
V+ I R G+ +T+ H+ V++V FN SL+ SGS D V++WD + C+K
Sbjct: 186 SVR-IWDVRTGMC---VKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVK 241
Query: 155 TL-ESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
TL + V FS + + S + D T+ +WD
Sbjct: 242 TLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWD 276
Score = 141 (54.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ HT ++++V+F+ L + S DKTVK+W++ L+C +TL H V +S D
Sbjct: 74 TIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADS 133
Query: 173 SLLASGSNDKTVTIWDMLATLLA 195
+ + S+DKT+ I+++ +A
Sbjct: 134 KSIVTASDDKTLKIYEVPTVKMA 156
Score = 59 (25.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 191 ATLLASGSNDKTVTIWDMRGNLSV 214
++L+ SGS D++V IWD+R + V
Sbjct: 175 SSLVVSGSFDESVRIWDVRTGMCV 198
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 195 (73.7 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 51/157 (32%), Positives = 77/157 (49%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
C F+P+ + LATG D+++ +W + GHT I G P+ L +
Sbjct: 23 CADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFV--GHTDV-ITGVNFAPSGSLVASSS 79
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
V+ P+ G +S HT++V SV F+ LV+ S DK+VK+W V
Sbjct: 80 RDQTVRLWTPSIKG----ESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKK 135
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ +L HT +V C FS D L+AS +D+TV +WD
Sbjct: 136 FLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWD 172
Score = 161 (61.7 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 56/187 (29%), Positives = 83/187 (44%)
Query: 10 PSLFNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRG 69
PS+ G + + H S +R V FS D + L T DD++V VW + + N
Sbjct: 89 PSI-KGESTVFKA--HTAS-VRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNR-- 142
Query: 70 HTQ----GRIEGWGR-VPACPLCRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTS 123
HT R GR + +C RT R++ T Q I YG + T
Sbjct: 143 HTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTD-YG----------GSATF 191
Query: 124 VRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKT 183
V FN + + S D T+K+WD+ + I+ + H V C +F + L SGS+D T
Sbjct: 192 VDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDST 251
Query: 184 VTIWDML 190
+ I D+L
Sbjct: 252 IKILDLL 258
Score = 133 (51.9 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 46/162 (28%), Positives = 70/162 (43%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIME-TNDRGHTQGRIEGWGRVPACPLCRTRV 91
V F+P L+A+ D+TV +W S+ E T + HT V + R
Sbjct: 66 VNFAPSGSLVASSSRDQTVRLWTP---SIKGESTVFKAHTAS-------VRSVHFSRDG- 114
Query: 92 FSTFVKQIIPTRVGVYGQDSE----TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV 147
V V V+G + + ++ RHT+ V RF+ L+ S D+TV+LWD
Sbjct: 115 -QRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDT 173
Query: 148 PSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S CI + T F+ + +AS D T+ IWD+
Sbjct: 174 SSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDI 215
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 27/71 (38%), Positives = 35/71 (49%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + V F+ + L+SGS D T+K+ D+ I TL H V TFS D L A
Sbjct: 227 HNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFA 286
Query: 177 SGSNDKTVTIW 187
SG D V +W
Sbjct: 287 SGGADSQVLMW 297
Score = 112 (44.5 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV-PSLTCIKTLESHTRYVTCCTFSCDDSLL 175
H ++ FN + L +GS DK++ +W++ P + + HT +T F+ SL+
Sbjct: 17 HKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFV-GHTDVITGVNFAPSGSLV 75
Query: 176 ASGSNDKTVTIW 187
AS S D+TV +W
Sbjct: 76 ASSSRDQTVRLW 87
Score = 56 (24.8 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 192 TLLASGSNDKTVTIWDMRGN 211
T +AS D T+ IWD+R N
Sbjct: 199 TCIASSGADNTIKIWDIRTN 218
Score = 53 (23.7 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 193 LLASGSNDKTVTIWDMRGNLSVDVPLNY 220
L+AS +D+TV +WD + +++ +Y
Sbjct: 158 LIASCGDDRTVRLWDTSSHQCINIFTDY 185
Score = 42 (19.8 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 194 LASGSNDKTVTIWDM-RGNL 212
L SGS+D T+ I D+ G L
Sbjct: 243 LISGSSDSTIKILDLLEGRL 262
Score = 39 (18.8 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 194 LASGSNDKTVTIW 206
L + S+DK+V +W
Sbjct: 117 LVTASDDKSVKVW 129
Score = 36 (17.7 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 193 LLASGSNDKTVTIW 206
L ASG D V +W
Sbjct: 284 LFASGGADSQVLMW 297
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 187 (70.9 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 55/158 (34%), Positives = 75/158 (47%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
CV FS +T+ LA+G D T+ +W S GH + P+ L +
Sbjct: 24 CVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFT--GHKDA-VTCVNFSPSGHLLASGS 80
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGR-HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSL 150
V+ +P V G+ TV R HT+ V SV F LLV+ S DKTVK+W
Sbjct: 81 RDKTVRIWVPN---VKGES--TVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQ 135
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ +L H +V C FS D L+ S S+DKTV +WD
Sbjct: 136 RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 158 (60.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 49/161 (30%), Positives = 70/161 (43%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
CV FSP LLA+G D+TV +W + T R HT V + C
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIWVPNVKG--ESTVFRAHT-------ATVRSVHFCSDG- 115
Query: 92 FSTFVKQIIPTRVGVYGQDSE----TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV 147
V V V+ + ++ +H + V +F+ L+VS S DKTVKLWD
Sbjct: 116 -QLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 148 PSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
S C+ + H +VT F + +A+ D TV +WD
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 215
Score = 151 (58.2 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 43/158 (27%), Positives = 70/158 (44%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+RC +FSPD RL+ + DD+TV +W + + G G + P+
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG---GFVTYVDFHPSGTCIAA 204
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
VK + TR Q + H++AV ++ F+ + L++ S D T+K+ D+
Sbjct: 205 AGMDNTVK-VWDTRTHRLVQHYQL---HSAAVNALSFHPSGNYLITASSDSTLKILDLME 260
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+ TL H T FS ASG +D+ V +W
Sbjct: 261 GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 140 (54.3 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 31/71 (43%), Positives = 38/71 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H AVT V F+ + L SGS+D T+ +W + + H VTC FS LLA
Sbjct: 18 HRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLA 77
Query: 177 SGSNDKTVTIW 187
SGS DKTV IW
Sbjct: 78 SGSRDKTVRIW 88
Score = 98 (39.6 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H VT V F+ + + + +D TVK+WD + ++ + H+ V +F + L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLI 245
Query: 177 SGSNDKTVTIWDML 190
+ S+D T+ I D++
Sbjct: 246 TASSDSTLKILDLM 259
Score = 68 (29.0 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVW 54
+ +R V F D +LL T DD+TV VW
Sbjct: 104 ATVRSVHFCSDGQLLVTASDDKTVKVW 130
Score = 54 (24.1 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 193 LLASGSNDKTVTIWDMRGNLSVDVPLNYC 221
L+ S S+DKTV +WD V +YC
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVH---SYC 184
Score = 47 (21.6 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 192 TLLASGSNDKTVTIWDMR 209
T +A+ D TV +WD R
Sbjct: 200 TCIAAAGMDNTVKVWDTR 217
Score = 47 (21.6 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 193 LLASGSNDKTVTIW 206
LL + S+DKTV +W
Sbjct: 117 LLVTASDDKTVKVW 130
Score = 39 (18.8 bits), Expect = 9.9e-17, Sum P(2) = 9.9e-17
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 183 TVTIWDMLATLLASGSNDKTVTIW 206
T + ASG +D+ V +W
Sbjct: 275 TTVAFSRTGEYFASGGSDEQVMVW 298
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 183 (69.5 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 52/156 (33%), Positives = 81/156 (51%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V+FS D RLLA+ D+T+ + + ++ + + T G G V R V
Sbjct: 30 VKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFT-GHENGISDVAFSSDARFIVS 88
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
++ K + V G +T+ HT+ V FN +S+++VSGS D+TV++WDV + C
Sbjct: 89 ASDDKTLKLWDVET-GSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKC 147
Query: 153 IKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+K L +H+ VT F+ D SL+ S S D IWD
Sbjct: 148 LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
Score = 176 (67.0 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 39/110 (35%), Positives = 61/110 (55%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + ++ V F+ + +VS S DKT+KLWDV + + IKTL HT Y C F+ +++
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIV 129
Query: 177 SGSNDKTVTIWDMLA----TLLASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
SGS D+TV IWD+ +L + S+ T ++ G+L V + C
Sbjct: 130 SGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLC 179
Score = 148 (57.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 46/158 (29%), Positives = 74/158 (46%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V FS D R + + DD+T+ +W + SLI GHT V P V
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDVETGSLIKTLI--GHTNYAF----CVNFNPQSNMIVS 130
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
+F + + V G+ + + H+ VT+V FN SL+VS S D ++WD + C
Sbjct: 131 GSFDETVRIWDVTT-GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHC 189
Query: 153 IKTL-ESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+KTL + V+ FS + + G+ D T+ +W++
Sbjct: 190 VKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNI 227
Score = 127 (49.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 111 SETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV-----PSLTCIKTLESHTRYVTC 165
S+T+ H AV+SV+F+ LL S S DKT++ + + P ++ H ++
Sbjct: 17 SQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query: 166 CTFSCDDSLLASGSNDKTVTIWDM 189
FS D + S S+DKT+ +WD+
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDV 100
Score = 112 (44.5 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+VSGS D V +W++ S ++ LE HT V ++L+ASGS DKTV IW
Sbjct: 258 IVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 110 (43.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 121 VTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHT--RYVTCCTFSCDDSL-LAS 177
V+ VRF+ ++ G++D T++LW++ S +KT H +Y FS + + S
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVS 260
Query: 178 GSNDKTVTIWDMLATLLASGSNDKTVTIWDM 208
GS D V +W++ + L T T+ ++
Sbjct: 261 GSEDNCVHMWELNSKKLLQKLEGHTETVMNV 291
Score = 69 (29.3 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
CV F+P + ++ +G DETV +W
Sbjct: 118 CVNFNPQSNMIVSGSFDETVRIW 140
Score = 56 (24.8 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 193 LLASGSNDKTVTIWDMR 209
L+ASGS DKTV IW +
Sbjct: 299 LIASGSLDKTVRIWTQK 315
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 186 (70.5 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 60/178 (33%), Positives = 85/178 (47%)
Query: 23 SVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIME-TNDRGHT-----QGRIE 76
SV GS + C F P L TG +TVW L E +D G T +
Sbjct: 136 SVKDGSLVACAFFPPGN-LFVTGSSCGDLTVWDDKMRCLHSEKAHDLGITCCDFSSQPVP 194
Query: 77 GWGR------VPACPL-CRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHK 129
G R + +C C+ +++ I+ G + T+ H + V + F+H
Sbjct: 195 GGERGLQFFQLASCGQDCQIKIWVISFIHIL----GFELKYKSTLTGHCAPVLACAFSHD 250
Query: 130 SSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+LVSGSVDK+V ++D + + TL HTRYVT C F+ + LLA+GS DKTV IW
Sbjct: 251 GQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNILLLATGSMDKTVNIW 308
Score = 118 (46.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCI--KTLESHTRYVTCCTFSC 170
T+ H V F+ SSLL + ++DKT++L+ + T + L+ HT V CC FS
Sbjct: 7 TLADHNDDVNCCAFS--SSLLATCALDKTIRLYFLSDFTEVPYSPLKFHTYAVHCCCFSP 64
Query: 171 DDSLLASGSNDKTVTIWD 188
+LAS S D T +WD
Sbjct: 65 SGHILASCSTDGTTVLWD 82
Score = 109 (43.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRY-VTCCTFSCDDSLL 175
HT AV F+ +L S S D T LWD + + +E + V C FS D + L
Sbjct: 53 HTYAVHCCCFSPSGHILASCSTDGTTVLWDTQNGQILAVMEQPSGSPVRVCRFSPDSTCL 112
Query: 176 ASGSNDKTVTIWD 188
SG++D TV +W+
Sbjct: 113 VSGASDGTVVLWN 125
Score = 100 (40.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 119 SAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASG 178
S V RF+ S+ LVSG+ D TV LW+ S + + C F +L +G
Sbjct: 98 SPVRVCRFSPDSTCLVSGASDGTVVLWNAQSYKLHRCASVKDGSLVACAFFPPGNLFVTG 157
Query: 179 SNDKTVTIWD-MLATLLASGSNDKTVTIWD 207
S+ +T+WD + L + ++D +T D
Sbjct: 158 SSCGDLTVWDDKMRCLHSEKAHDLGITCCD 187
Score = 81 (33.6 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 133 LVSGSVDKTVKLWDVPSLTCI-------KTLESHTRYVTCCTFSCDDSLLASGSNDKTVT 185
L S D +K+W + + + TL H V C FS D +L SGS DK+V
Sbjct: 205 LASCGQDCQIKIWVISFIHILGFELKYKSTLTGHCAPVLACAFSHDGQMLVSGSVDKSVI 264
Query: 186 IWD 188
++D
Sbjct: 265 VYD 267
Score = 79 (32.9 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 27 GSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSL 61
GS +R RFSPD+ L +G D TV +W + L
Sbjct: 97 GSPVRVCRFSPDSTCLVSGASDGTVVLWNAQSYKL 131
Score = 56 (24.8 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 11/14 (78%), Positives = 12/14 (85%)
Query: 193 LLASGSNDKTVTIW 206
LLA+GS DKTV IW
Sbjct: 295 LLATGSMDKTVNIW 308
Score = 51 (23.0 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW--RSDDLSLIME 64
+ C FSP +LA+ D T +W ++ + +ME
Sbjct: 57 VHCCCFSPSGHILASCSTDGTTVLWDTQNGQILAVME 93
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 192 (72.6 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 36/86 (41%), Positives = 57/86 (66%)
Query: 105 GVY-GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
G Y G+ +T+ H ++ V ++ S LLVSGS DKT+K+W++ + +KTL+ H+ YV
Sbjct: 100 GAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYV 159
Query: 164 TCCTFSCDDSLLASGSNDKTVTIWDM 189
CC F+ +L+ SGS D++V IWD+
Sbjct: 160 FCCNFNPQSNLIVSGSFDESVRIWDV 185
Score = 184 (69.8 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 50/157 (31%), Positives = 80/157 (50%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPACPLCRTRV 91
V+FSP+ LA+ D+ + +W + D E GH G + W R V
Sbjct: 78 VKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDS-----RLLV 130
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
+ K + + G+ +T+ H++ V FN +S+L+VSGS D++V++WDV +
Sbjct: 131 SGSDDKTLKVWELST-GKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 189
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
C+KTL +H+ V+ F+ D SL+ S S D IWD
Sbjct: 190 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 226
Score = 162 (62.1 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 51/158 (32%), Positives = 80/158 (50%)
Query: 33 VRFSPDTRLLATGGDDETVTVWR-SDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
V +S D+RLL +G DD+T+ VW S SL +T +GH+ + P L +
Sbjct: 120 VAWSSDSRLLVSGSDDKTLKVWELSTGKSL--KTL-KGHSN-YVFCCNFNPQSNLIVSGS 175
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
F V+ I R G + +T+ H+ V++V FN SL+VS S D ++WD S
Sbjct: 176 FDESVR-IWDVRTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 231
Query: 152 CIKTL-ESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
C+KTL + V+ FS + + + + D T+ +WD
Sbjct: 232 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 269
Score = 146 (56.5 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 32/91 (35%), Positives = 51/91 (56%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ HT AV++V+F+ L S S DK +K+W KT+ H ++ +S D
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 126
Query: 173 SLLASGSNDKTVTIWDMLATLLASGSNDKTV 203
LL SGS+DKT+ +W+ L++G + KT+
Sbjct: 127 RLLVSGSDDKTLKVWE-----LSTGKSLKTL 152
Score = 107 (42.7 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 121 VTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHT--RYVTCCTFSCDDSL-LAS 177
V+ V+F+ +++ ++D T+KLWD C+KT H +Y FS + S
Sbjct: 244 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 303
Query: 178 GSNDKTVTIWDM 189
GS D V IW++
Sbjct: 304 GSEDNMVYIWNL 315
Score = 103 (41.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGS--NDKTVTIW 187
+VSGS D V +W++ S ++ L+ HT V C ++++AS + NDKT+ +W
Sbjct: 301 IVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 62 (26.9 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
C F+P + L+ +G DE+V +W
Sbjct: 161 CCNFNPQSNLIVSGSFDESVRIW 183
Score = 39 (18.8 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 193 LLASGS--NDKTVTIW 206
++AS + NDKT+ +W
Sbjct: 342 IIASAALENDKTIKLW 357
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 215 (80.7 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 66/195 (33%), Positives = 97/195 (49%)
Query: 22 GSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIME-TNDRGHT------QGR 74
GSV GS + C FSP+ TG +TVW L E +D G T Q
Sbjct: 135 GSVKDGSLVACA-FSPNGNFFVTGSSCGDITVWDDKMRCLHSEKAHDLGITCCDFSSQPV 193
Query: 75 IEG-----WGRVPACPL-CRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNH 128
+G + R+ +C C+ +++ I+ G + T+ H + V + F+H
Sbjct: 194 SDGEQGLQFFRLASCGQDCQIKIWVVSFTHIL----GFELKYKSTLSGHCAPVLACAFSH 249
Query: 129 KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW- 187
+LVSGSVDK+V ++D + T + TL HTRYVT C F+ + LLA+GS DKTV IW
Sbjct: 250 NGQMLVSGSVDKSVIVYDTNTETILHTLTQHTRYVTSCAFAPNILLLATGSMDKTVNIWQ 309
Query: 188 -DMLATLLASGSNDK 201
D+ A ++D+
Sbjct: 310 FDLETPCQARNTDDQ 324
Score = 111 (44.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 48/187 (25%), Positives = 83/187 (44%)
Query: 27 GSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPL 86
G ++ C FS + LLAT D+T+ ++ D + + + + HT V C
Sbjct: 12 GDDVNCCAFS--SSLLATCSLDKTIRLYSLSDFTELPHSPLKFHTYA-------VHCCCF 62
Query: 87 CRT-RVFSTFVKQIIPTRVGVYGQDSETVG---RHT-SAVTSVRFNHKSSLLVSGSVDKT 141
+ V ++ T V Q+ ET+ + T S V +F+ S+ LVSG+ D T
Sbjct: 63 SPSGHVLASCSTD--GTTVLWNTQNGETLAVMEQPTGSPVRVCQFSPDSTCLVSGAADGT 120
Query: 142 VKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD-MLATLLASGSND 200
V LW+ S + + C FS + + +GS+ +T+WD + L + ++D
Sbjct: 121 VVLWNAQSYKLYRCGSVKDGSLVACAFSPNGNFFVTGSSCGDITVWDDKMRCLHSEKAHD 180
Query: 201 KTVTIWD 207
+T D
Sbjct: 181 LGITCCD 187
Score = 56 (24.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 11/14 (78%), Positives = 12/14 (85%)
Query: 193 LLASGSNDKTVTIW 206
LLA+GS DKTV IW
Sbjct: 295 LLATGSMDKTVNIW 308
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 215 (80.7 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 66/191 (34%), Positives = 94/191 (49%)
Query: 22 GSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIME-TNDRGHT--------- 71
GSV S + C FSPD LL TG +TVW L E +D G T
Sbjct: 135 GSVKDSSLVACA-FSPDGGLLVTGSSGGDLTVWDDRMRCLHSEKAHDLGITCCSFSSQPL 193
Query: 72 QGRIEGWG--RVPACPL-CRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNH 128
G G R+ +C C +++ +++ G + T+ H + V + F+H
Sbjct: 194 SGGEHGLQLYRLASCGQDCEIKLWVVSFTRVL----GFELKYRSTLSGHCAPVLACAFSH 249
Query: 129 KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+L SGSVDK+V ++D+ + + + TL HTRYVT C F+ + LLA+GS DKTV IW
Sbjct: 250 DGQMLASGSVDKSVIIYDIGTQSVLHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVNIWQ 309
Query: 189 M-LATLLASGS 198
L T +GS
Sbjct: 310 FDLETPCQAGS 320
Score = 105 (42.0 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 44/182 (24%), Positives = 76/182 (41%)
Query: 27 GSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPL 86
G ++ C FS + LLAT D+T+ ++ D + + + + HT V C
Sbjct: 12 GDDVSCCAFS--STLLATCSLDKTIRLYSLSDFAELPHSPLKFHTYA-------VHCCSF 62
Query: 87 CRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHT--SAVTSVRFNHKSSLLVSGSVDKTVK 143
+ V ++ + + TV S V F+ S+ L SG+ D +V
Sbjct: 63 SPSGHVLASCSTDGTTVLWSAHSGHTLTVLEQPGGSPVRVCCFSPDSTYLASGAADGSVV 122
Query: 144 LWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD-MLATLLASGSNDKT 202
LW+ S + + C FS D LL +GS+ +T+WD + L + ++D
Sbjct: 123 LWNAHSYKLYRCGSVKDSSLVACAFSPDGGLLVTGSSGGDLTVWDDRMRCLHSEKAHDLG 182
Query: 203 VT 204
+T
Sbjct: 183 IT 184
Score = 56 (24.8 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 11/14 (78%), Positives = 12/14 (85%)
Query: 193 LLASGSNDKTVTIW 206
LLA+GS DKTV IW
Sbjct: 295 LLATGSMDKTVNIW 308
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 181 (68.8 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 54/158 (34%), Positives = 74/158 (46%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
CV FS +T+ LA+G D T+ +W S GH + P+ L +
Sbjct: 24 CVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFT--GHKDA-VTCVNFSPSGHLLASGS 80
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGR-HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSL 150
V+ +P V G+ TV R HT+ V SV F LV+ S DKTVK+W
Sbjct: 81 RDKTVRIWVPN---VKGES--TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQ 135
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ +L H +V C FS D L+ S S+DKTV +WD
Sbjct: 136 RFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 161 (61.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 52/163 (31%), Positives = 75/163 (46%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG-RI-----EGWGRVPACP 85
CV FSP LLA+G D+TV +W + T R HT R +G V A
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIWVPNVKG--ESTVFRAHTATVRSVHFCSDGQSLVTASD 123
Query: 86 LCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLW 145
+V+ST ++ + ++ +H + V +F+ L+VS S DKTVKLW
Sbjct: 124 DKTVKVWSTHRQRFL-----------FSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 146 DVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
D S CI + H +VT F + +A+ D TV +WD
Sbjct: 173 DKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 215
Score = 146 (56.5 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 43/158 (27%), Positives = 69/158 (43%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+RC +FSPD RL+ + DD+TV +W I + G G + P+
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHG---GFVTYVDFHPSGTCIAA 204
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
VK + R Q + H++AV ++ F+ + L++ S D T+K+ D+
Sbjct: 205 AGMDNTVK-VWDARTHRLLQHYQL---HSAAVNALSFHPSGNYLITASSDSTLKILDLME 260
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+ TL H T FS ASG +D+ V +W
Sbjct: 261 GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 140 (54.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 31/71 (43%), Positives = 38/71 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H AVT V F+ + L SGS+D T+ +W + + H VTC FS LLA
Sbjct: 18 HRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLA 77
Query: 177 SGSNDKTVTIW 187
SGS DKTV IW
Sbjct: 78 SGSRDKTVRIW 88
Score = 97 (39.2 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H VT V F+ + + + +D TVK+WD + ++ + H+ V +F + L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLI 245
Query: 177 SGSNDKTVTIWDML 190
+ S+D T+ I D++
Sbjct: 246 TASSDSTLKILDLM 259
Score = 62 (26.9 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVW 54
+ +R V F D + L T DD+TV VW
Sbjct: 104 ATVRSVHFCSDGQSLVTASDDKTVKVW 130
Score = 53 (23.7 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 193 LLASGSNDKTVTIWD 207
L+ S S+DKTV +WD
Sbjct: 159 LIVSASDDKTVKLWD 173
Score = 47 (21.6 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 192 TLLASGSNDKTVTIWDMR 209
T +A+ D TV +WD R
Sbjct: 200 TCIAAAGMDNTVKVWDAR 217
Score = 43 (20.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 194 LASGSNDKTVTIW 206
L + S+DKTV +W
Sbjct: 118 LVTASDDKTVKVW 130
Score = 39 (18.8 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 183 TVTIWDMLATLLASGSNDKTVTIW 206
T + ASG +D+ V +W
Sbjct: 275 TTVAFSRTGEYFASGGSDEQVMVW 298
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 208 (78.3 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 57/170 (33%), Positives = 89/170 (52%)
Query: 20 LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GW 78
L+G H+ S + V+FSPD + LA+ D+T+ +W + D E GH +G + W
Sbjct: 42 LKG--HLKS-ISSVKFSPDGKWLASASADKTIKIWGAYDGKF--ERTLEGHKEGISDIAW 96
Query: 79 GRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSV 138
+ +C T + + G+ +T+ H V V FN +S+L+VSGS
Sbjct: 97 SQDSKL-ICSASDDKTIKIWDVES-----GKMVKTLKGHKEYVFGVSFNPQSNLIVSGSF 150
Query: 139 DKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
D+ V++WDV + C K + +H+ VT F+ D +L+ SGS D TV IWD
Sbjct: 151 DENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWD 200
Score = 167 (63.8 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 33/86 (38%), Positives = 51/86 (59%)
Query: 105 GVY-GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
G Y G+ T+ H ++ + ++ S L+ S S DKT+K+WDV S +KTL+ H YV
Sbjct: 74 GAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYV 133
Query: 164 TCCTFSCDDSLLASGSNDKTVTIWDM 189
+F+ +L+ SGS D+ V IWD+
Sbjct: 134 FGVSFNPQSNLIVSGSFDENVRIWDV 159
Score = 161 (61.7 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 40/156 (25%), Positives = 79/156 (50%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
+ +S D++L+ + DD+T+ +W + ++ +GH + + G V P V
Sbjct: 94 IAWSQDSKLICSASDDKTIKIWDVESGKMVKTL--KGHKE-YVFG---VSFNPQSNLIVS 147
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
+F + + V G+ ++ + H+ VT V FN +L+VSGS D TV++WD +
Sbjct: 148 GSFDENVRIWDVNT-GECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQL 206
Query: 153 IKTLESHT-RYVTCCTFSCDDSLLASGSNDKTVTIW 187
+ T+ + + V+ FS + + +G+ D T+ +W
Sbjct: 207 LNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLW 242
Score = 144 (55.7 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H +++SV+F+ L S S DKT+K+W +TLE H ++ +S D
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS 100
Query: 173 SLLASGSNDKTVTIWDM 189
L+ S S+DKT+ IWD+
Sbjct: 101 KLICSASDDKTIKIWDV 117
Score = 50 (22.7 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 191 ATLLASGSNDKTVTIWDM 208
+ L+ SGS D+ V IWD+
Sbjct: 142 SNLIVSGSFDENVRIWDV 159
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 214 (80.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 67/180 (37%), Positives = 87/180 (48%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R V FS D++LLA+ DD TV +W + SL T + GH W R
Sbjct: 382 VRSVIFSHDSQLLASASDDSTVKIWDTGTGSL-QHTLE-GHRD-----WVRSVIFSHDSQ 434
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
+ S + G T+ H V SV F+H S LL S S D+TV++WD
Sbjct: 435 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEK 494
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIWDMR 209
+ TLE H+ VT +FS D LLAS SND+TV IWD+ A L + D TI MR
Sbjct: 495 GSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQH-TFDLDATIEAMR 553
Score = 204 (76.9 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 61/163 (37%), Positives = 80/163 (49%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V +S D+RLLA+ DD TV +W + ET HT +EG L R+ +F
Sbjct: 302 VSYSHDSRLLASASDDRTVKIWDT-------ETGSLQHT---LEGHS-----DLVRSVIF 346
Query: 93 S---TFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLW 145
S + + V ++ G T+ H V SV F+H S LL S S D TVK+W
Sbjct: 347 SHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 406
Query: 146 DVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
D + + TLE H +V FS D LLAS S+D TV IWD
Sbjct: 407 DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 449
Score = 199 (75.1 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 73/202 (36%), Positives = 91/202 (45%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R V FS D+RLLA+ D TV +W + SL T + GH W R
Sbjct: 341 VRSVIFSHDSRLLASASDS-TVKIWDTGTGSL-QHTLE-GHRD-----WVRSVIFSHDSQ 392
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
+ S + G T+ H V SV F+H S LL S S D TVK+WD +
Sbjct: 393 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 452
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM--------------LAT--- 192
+ TLE H +V FS D LLAS S+D+TV IWD L T
Sbjct: 453 GSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVS 512
Query: 193 ------LLASGSNDKTVTIWDM 208
LLAS SND+TV IWD+
Sbjct: 513 FSHDSRLLASASNDQTVRIWDI 534
Score = 160 (61.4 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 36/72 (50%), Positives = 44/72 (61%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H +AV SV ++H S LL S S D+TVK+WD + + TLE H+ V FS D LLA
Sbjct: 295 HEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLA 354
Query: 177 SGSNDKTVTIWD 188
S S D TV IWD
Sbjct: 355 SAS-DSTVKIWD 365
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 187 (70.9 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 58/171 (33%), Positives = 81/171 (47%)
Query: 28 SNMRCVRFSPDT-RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG----RIEGWGR-- 80
SN+ + T RLLATGGDD V VW + + +M GHT +I
Sbjct: 21 SNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLT--GHTTPIESLQISAKEELI 78
Query: 81 VPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDK 140
V RV+ +I+ T +G H + + S+ F+ S + SGS+D
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLG-----------HKANICSLDFHPYGSFVASGSLDT 127
Query: 141 TVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLA 191
+KLWDV CI +SHT+ V C FS D LAS ++D TV +WD+ A
Sbjct: 128 DIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 109 (43.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 117 HTSAVTSVRFNHKSS-LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL 175
H+S V+S+ + LL +G D V +W V C+ +L HT + S + L+
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 176 ASGSNDKTVTIWDM-----LATLLASGSN 199
+GS ++ +WD+ L TLL +N
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGHKAN 107
Score = 52 (23.4 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
LLASGS+ T+ WD+
Sbjct: 204 LLASGSSSMTIRFWDL 219
Score = 48 (22.0 bits), Expect = 0.00028, Sum P(2) = 0.00027
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 194 LASGSNDKTVTIWDM 208
LAS ++D TV +WD+
Sbjct: 162 LASAADDHTVKLWDL 176
Score = 48 (22.0 bits), Expect = 0.00028, Sum P(2) = 0.00027
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 192 TLLASGSNDKTVTIWDMR 209
+ +ASGS D + +WD+R
Sbjct: 118 SFVASGSLDTDIKLWDVR 135
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 193 (73.0 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 56/155 (36%), Positives = 71/155 (45%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V FSPD+RLLA+ DD TV +W + SL + GH W R +
Sbjct: 437 VSFSPDSRLLASASDDRTVKIWHAATGSL--QRTLEGHND-----WVRSVVFSHDSRLIA 489
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
S + + H + V SV F+H S LL S S D TVK+WD + +
Sbjct: 490 SASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSL 549
Query: 153 IKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
TLE H V +FS D LLAS S+D TV IW
Sbjct: 550 ENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 193 (73.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 62/185 (33%), Positives = 86/185 (46%)
Query: 29 NMRCVRFSPDTRLLATGGDDETVTVW--RSDDLSLIMETNDRGHTQGRIEGWGRVPACPL 86
++ V F+ D+R LA+ D V +W R+ L ++E GH + V P
Sbjct: 391 SVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLE----GHD----DCVNSVSFSPD 442
Query: 87 CRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
R + S + + G T+ H V SV F+H S L+ S S D TVK+WD
Sbjct: 443 SRL-LASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWD 501
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIW 206
++ LESH +V FS D LLAS S+D TV IWD A+GS + T+
Sbjct: 502 TATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDT-----ATGSLENTLEGH 556
Query: 207 DMRGN 211
D R N
Sbjct: 557 DDRVN 561
Score = 175 (66.7 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 42/92 (45%), Positives = 50/92 (54%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H AV SV F+H S LL S S D TVK+WD + TLE H +V FS D LLA
Sbjct: 262 HDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLA 321
Query: 177 SGSNDKTVTIWDMLA-TL--LASGSNDKTVTI 205
S S+D TV IWD TL + G ND ++
Sbjct: 322 SASDDGTVKIWDTATGTLQRMLKGHNDSVRSV 353
Score = 174 (66.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 52/160 (32%), Positives = 71/160 (44%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R V FS D+RL+A+ DD TV +W D ++ ++ N H + W R
Sbjct: 476 VRSVVFSHDSRLIASASDDMTVKIW--DTATVPLQNNLESH-----DNWVRSVVFSHDSR 528
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
+ S + G T+ H V SV F+ S LL S S D TVK+W +
Sbjct: 529 LLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAAT 588
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
T T + R FS +LLAS +D TV IWDM
Sbjct: 589 GTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDM 628
Score = 170 (64.9 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 62/200 (31%), Positives = 92/200 (46%)
Query: 7 GDGP-SLFNGTELILRGSVHIGSN--MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIM 63
GDG +++ L+ ++ G N ++ V FS D+RLLA+ DD TV +W D + +
Sbjct: 283 GDGTVKIWDTATSFLQNTLE-GHNEWVKSVVFSHDSRLLASASDDGTVKIW--DTATGTL 339
Query: 64 ETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTS 123
+ +GH + L + V+ I T G+ E H +V +
Sbjct: 340 QRMLKGHNDS-VRSVVFSHDSRLIASGSNDRTVR-IWETTTGLLRHTFED---HEDSVMA 394
Query: 124 VRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKT 183
V F H S L S S VK+WD + + LE H V +FS D LLAS S+D+T
Sbjct: 395 VSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRT 454
Query: 184 VTIWDMLATLLASGSNDKTV 203
V IW A+GS +T+
Sbjct: 455 VKIWHA-----ATGSLQRTL 469
Score = 165 (63.1 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 50/156 (32%), Positives = 72/156 (46%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V FS D+RLLA+ D TV +W D + ++ GH + ++ L +
Sbjct: 269 VSFSHDSRLLASASGDGTVKIW--DTATSFLQNTLEGHNEW-VKSVVFSHDSRLLASASD 325
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
VK I T G + H +V SV F+H S L+ SGS D+TV++W+ +
Sbjct: 326 DGTVK-IWDTATGTL---QRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLL 381
Query: 153 IKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
T E H V +F+ D LAS S+ V IWD
Sbjct: 382 RHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWD 417
Score = 56 (24.8 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 178 GSNDKTVTI-WDMLATLLASGSNDKTVTIWDM 208
GS +++ + + LLAS +D TV IWDM
Sbjct: 597 GSGRVAISLAFSHTSNLLASAMDDGTVKIWDM 628
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 210 (79.0 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 70/209 (33%), Positives = 101/209 (48%)
Query: 8 DGP-SLFNG-TELILR-GSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIME 64
DG +L+N T + R GSV S + C FSPD L TG +TVW L E
Sbjct: 118 DGSIALWNAQTYKLYRCGSVKDSSLVACA-FSPDGGLFVTGSSGGDLTVWDDRMRCLHSE 176
Query: 65 -TNDRGHT------QGRIEGWG----RVPACPL-CRTRVFSTFVKQIIPTRVGVYGQDSE 112
+D G T Q G G ++ +C C ++++ + +++ G +
Sbjct: 177 KAHDLGITCCSFSSQPLSGGEGLQSYQLASCGQDCEIKLWAVTITRVL----GFELKYKS 232
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + V + F+H +L SGSVDK+V + + + + TL HTRYVT C F+ +
Sbjct: 233 TLSGHCAPVLACAFSHDGKMLASGSVDKSVIIHGIGPQSVLHTLTQHTRYVTTCAFAPNT 292
Query: 173 SLLASGSNDKTVTIWDM-LATLLASGSND 200
LLA+GS DKTV IW L T ND
Sbjct: 293 LLLATGSMDKTVNIWQFDLETPCQGSMND 321
Score = 99 (39.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 40/176 (22%), Positives = 70/176 (39%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+ C FSP +LA+ D T +W S GHT +E G P C +
Sbjct: 57 VHCCCFSPSGHVLASCSTDGTTVLWSSHS----------GHTLTVLEQPGGSPVRVCCFS 106
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGR----HTSAVTSVRFNHKSSLLVSGSVDKTVKLW 145
+ + ++ + + R S++ + F+ L V+GS + +W
Sbjct: 107 PDSAYLASGAADGSIALWNAQTYKLYRCGSVKDSSLVACAFSPDGGLFVTGSSGGDLTVW 166
Query: 146 DVPSLTCIKTLESHTRYVTCCTFSCD-----DSL----LASGSNDKTVTIWDMLAT 192
D + C+ + ++H +TCC+FS + L LAS D + +W + T
Sbjct: 167 D-DRMRCLHSEKAHDLGITCCSFSSQPLSGGEGLQSYQLASCGQDCEIKLWAVTIT 221
Score = 96 (38.9 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 26/73 (35%), Positives = 35/73 (47%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRY-VTCCTFSCDDSLL 175
HT AV F+ +L S S D T LW S + LE V C FS D + L
Sbjct: 53 HTYAVHCCCFSPSGHVLASCSTDGTTVLWSSHSGHTLTVLEQPGGSPVRVCCFSPDSAYL 112
Query: 176 ASGSNDKTVTIWD 188
ASG+ D ++ +W+
Sbjct: 113 ASGAADGSIALWN 125
Score = 56 (24.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 11/14 (78%), Positives = 12/14 (85%)
Query: 193 LLASGSNDKTVTIW 206
LLA+GS DKTV IW
Sbjct: 294 LLATGSMDKTVNIW 307
>UNIPROTKB|B8ZZF2 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511 EMBL:AC008277
HGNC:HGNC:26697 IPI:IPI00915918 ProteinModelPortal:B8ZZF2
SMR:B8ZZF2 Ensembl:ENST00000409124 ArrayExpress:B8ZZF2 Bgee:B8ZZF2
Uniprot:B8ZZF2
Length = 429
Score = 206 (77.6 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 62/187 (33%), Positives = 94/187 (50%)
Query: 22 GSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW----------RSDDLSLIM-ETNDRGH 70
GSV GS C FSP+ TG +TVW ++ DL + + + +
Sbjct: 135 GSVKDGSLAACA-FSPNGSFFVTGSSCGDLTVWDDKMRCPHSEKAHDLGITCCDFSSQPV 193
Query: 71 TQGRIEG--WGRVPACPL-CRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFN 127
+ G +G + R+ +C C+ +++ I+ G + T+ H + V + F+
Sbjct: 194 SDGE-QGLQFFRLASCGQDCQVKIWIVSFTHIL----GFELKYKSTLSGHCAPVLACAFS 248
Query: 128 HKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
H +LVSGSVDK+V ++D + + TL HTRYVT C F+ + LLA+GS DKTV IW
Sbjct: 249 HDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVNIW 308
Query: 188 DM-LATL 193
L TL
Sbjct: 309 QFDLETL 315
Score = 110 (43.8 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 28/78 (35%), Positives = 41/78 (52%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCI--KTLESHTRYVTCCTFSC 170
T+ H V F+ SLL + S+DKT++L+ + T + L+ HT V CC FS
Sbjct: 7 TLADHGDDVNCCAFSF--SLLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHCCCFSP 64
Query: 171 DDSLLASGSNDKTVTIWD 188
+LAS S D T +W+
Sbjct: 65 SGHILASCSTDGTTVLWN 82
Score = 105 (42.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRY-VTCCTFSCDDSLL 175
HT AV F+ +L S S D T LW+ + + +E + V C FS D + L
Sbjct: 53 HTYAVHCCCFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCL 112
Query: 176 ASGSNDKTVTIWD 188
ASG+ D TV +W+
Sbjct: 113 ASGAADGTVVLWN 125
Score = 95 (38.5 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 119 SAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASG 178
S V +F+ S+ L SG+ D TV LW+ S + + C FS + S +G
Sbjct: 98 SPVRVCQFSPDSTCLASGAADGTVVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTG 157
Query: 179 SNDKTVTIWD 188
S+ +T+WD
Sbjct: 158 SSCGDLTVWD 167
Score = 56 (24.8 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 11/14 (78%), Positives = 12/14 (85%)
Query: 193 LLASGSNDKTVTIW 206
LLA+GS DKTV IW
Sbjct: 295 LLATGSMDKTVNIW 308
Score = 54 (24.1 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDD--LSLIME 64
+ C FSP +LA+ D T +W +++ + +ME
Sbjct: 57 VHCCCFSPSGHILASCSTDGTTVLWNTENGQMLAVME 93
Score = 49 (22.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 191 ATLLASGSNDKTVTIWD 207
+T LASG+ D TV +W+
Sbjct: 109 STCLASGAADGTVVLWN 125
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 170 (64.9 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 48/154 (31%), Positives = 71/154 (46%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFST 94
FSP + +A+G D +V VW S GH + P+ L +
Sbjct: 26 FSPSGKQIASGSVDASVMVWNMKPQSRAYRFT--GHKDA-VTCVQFSPSAHLLASSSRDK 82
Query: 95 FVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIK 154
V+ +P+ G +S HT +V SV F+ L++ S D+++KLW V I
Sbjct: 83 TVRLWVPSVKG----ESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIIC 138
Query: 155 TLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
TL H +V C FS D L+ S S+D+TV +WD
Sbjct: 139 TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWD 172
Score = 151 (58.2 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+RC RFSPD +L+ + DD TV +W + LI + G ++ P+ C
Sbjct: 147 VRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFH---PSST-CIA 202
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
S ++ R Q + H++AV ++ F+ + L++ S D T+K+ D+
Sbjct: 203 TASSDNTVRVWDIRTHTLLQHYQV---HSAAVNALSFHPSGNHLLTASSDSTLKILDLLE 259
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+ TL H +C +FS AS +D+ V +W
Sbjct: 260 GRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 132 (51.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H A+TS+ F+ + SGSVD +V +W++ + H VTC FS LLA
Sbjct: 17 HRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLA 76
Query: 177 SGSNDKTVTIW 187
S S DKTV +W
Sbjct: 77 SSSRDKTVRLW 87
Score = 130 (50.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTL-ESHTRYVTCCTFSCDDSLL 175
H AVT V+F+ + LL S S DKTV+LW VPS+ L +HT V FS D L
Sbjct: 59 HKDAVTCVQFSPSAHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSL 117
Query: 176 ASGSNDKTVTIWDM 189
+ S+D+++ +W +
Sbjct: 118 LTASDDQSIKLWSV 131
Score = 126 (49.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + V RF+ L+VS S D+TVKLWD S I T Y + F
Sbjct: 139 TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSS 198
Query: 173 SLLASGSNDKTVTIWDMLA-TLL 194
+ +A+ S+D TV +WD+ TLL
Sbjct: 199 TCIATASSDNTVRVWDIRTHTLL 221
Score = 121 (47.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 47/185 (25%), Positives = 88/185 (47%)
Query: 10 PSLFNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRG 69
PS+ G ++ R H GS +R V FS D + L T DD+++ +W +I +
Sbjct: 89 PSV-KGESVLFRA--HTGS-VRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHN 144
Query: 70 HTQ--GRIEGWGRVPACPLC-RT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVR 125
+ R G++ RT +++ +Q+I T + + G ++S V
Sbjct: 145 NWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHT----FCEP----GGYSSYVD--- 193
Query: 126 FNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVT 185
F+ S+ + + S D TV++WD+ + T ++ + H+ V +F + L + S+D T+
Sbjct: 194 FHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLK 253
Query: 186 IWDML 190
I D+L
Sbjct: 254 ILDLL 258
Score = 69 (29.3 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
CV+FSP LLA+ D+TV +W
Sbjct: 65 CVQFSPSAHLLASSSRDKTVRLW 87
Score = 57 (25.1 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
+T +A+ S+D TV +WD+R
Sbjct: 198 STCIATASSDNTVRVWDIR 216
Score = 47 (21.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 193 LLASGSNDKTVTIWD 207
L+ S S+D+TV +WD
Sbjct: 158 LMVSVSDDRTVKLWD 172
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 206 (77.6 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 62/187 (33%), Positives = 94/187 (50%)
Query: 22 GSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW----------RSDDLSLIM-ETNDRGH 70
GSV GS C FSP+ TG +TVW ++ DL + + + +
Sbjct: 135 GSVKDGSLAACA-FSPNGSFFVTGSSCGDLTVWDDKMRCPHSEKAHDLGITCCDFSSQPV 193
Query: 71 TQGRIEG--WGRVPACPL-CRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFN 127
+ G +G + R+ +C C+ +++ I+ G + T+ H + V + F+
Sbjct: 194 SDGE-QGLQFFRLASCGQDCQVKIWIVSFTHIL----GFELKYKSTLSGHCAPVLACAFS 248
Query: 128 HKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
H +LVSGSVDK+V ++D + + TL HTRYVT C F+ + LLA+GS DKTV IW
Sbjct: 249 HDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVNIW 308
Query: 188 DM-LATL 193
L TL
Sbjct: 309 QFDLETL 315
Score = 110 (43.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 28/78 (35%), Positives = 41/78 (52%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCI--KTLESHTRYVTCCTFSC 170
T+ H V F+ SLL + S+DKT++L+ + T + L+ HT V CC FS
Sbjct: 7 TLADHGDDVNCCAFSF--SLLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHCCCFSP 64
Query: 171 DDSLLASGSNDKTVTIWD 188
+LAS S D T +W+
Sbjct: 65 SGHILASCSTDGTTVLWN 82
Score = 105 (42.0 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRY-VTCCTFSCDDSLL 175
HT AV F+ +L S S D T LW+ + + +E + V C FS D + L
Sbjct: 53 HTYAVHCCCFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCL 112
Query: 176 ASGSNDKTVTIWD 188
ASG+ D TV +W+
Sbjct: 113 ASGAADGTVVLWN 125
Score = 95 (38.5 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 119 SAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASG 178
S V +F+ S+ L SG+ D TV LW+ S + + C FS + S +G
Sbjct: 98 SPVRVCQFSPDSTCLASGAADGTVVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTG 157
Query: 179 SNDKTVTIWD 188
S+ +T+WD
Sbjct: 158 SSCGDLTVWD 167
Score = 56 (24.8 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 11/14 (78%), Positives = 12/14 (85%)
Query: 193 LLASGSNDKTVTIW 206
LLA+GS DKTV IW
Sbjct: 295 LLATGSMDKTVNIW 308
Score = 54 (24.1 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDD--LSLIME 64
+ C FSP +LA+ D T +W +++ + +ME
Sbjct: 57 VHCCCFSPSGHILASCSTDGTTVLWNTENGQMLAVME 93
Score = 49 (22.3 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 191 ATLLASGSNDKTVTIWD 207
+T LASG+ D TV +W+
Sbjct: 109 STCLASGAADGTVVLWN 125
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 182 (69.1 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 58/177 (32%), Positives = 83/177 (46%)
Query: 15 GTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGR 74
GT I + H + C++F+ + L TG D T+ +W+ D + GHT+G
Sbjct: 372 GTHTIKTFTGH-SDGVTCLQFN--RKYLMTGSYDTTIKIWKIDSGECVKTLT--GHTKG- 425
Query: 75 IEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVY--GQDSETVGRHTSAVTSVRFNHKSSL 132
V A ++ S + I +V Y GQ T H AV SV F +KS
Sbjct: 426 ------VRALVFDNQKLISGGLDSTI--KVWNYHTGQCIATYRGHEDAVVSVDFTNKS-- 475
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+VSGS D TV++W V S TC TL HT +V + + S S+D T+ +WDM
Sbjct: 476 IVSGSADHTVRVWHVDSRTCY-TLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDM 531
Score = 149 (57.5 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 112 ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD 171
+T H+ VT ++FN K L++GS D T+K+W + S C+KTL HT+ V F D
Sbjct: 377 KTFTGHSDGVTCLQFNRK--YLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVF--D 432
Query: 172 DSLLASGSNDKTVTIWDM-LATLLAS--GSNDKTVTI 205
+ L SG D T+ +W+ +A+ G D V++
Sbjct: 433 NQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSV 469
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 27/106 (25%), Positives = 54/106 (50%)
Query: 100 IPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESH 159
+P + + T + +A T+ N + ++ ++D T+KLWDV + CI+T H
Sbjct: 608 LPNDTATINRSTFTPSNNNTATTATTPNSYPTHFLTSALDNTIKLWDVATGKCIRTQFGH 667
Query: 160 TRYVTCCTFSCDDSLLASGSNDKTVTIWDML-ATLLASGSNDKTVT 204
V + + D + SG++D+ + +WD+ L + SN+ +V+
Sbjct: 668 IEGVW--SIAADTFRIISGAHDRLIKVWDLQNGKCLHTFSNNSSVS 711
Score = 52 (23.4 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 196 SGSNDKTVTIWDMRGNLSVDV 216
S S+D T+ +WDM N + V
Sbjct: 519 SASDDTTIRMWDMNSNECIKV 539
Score = 50 (22.7 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 7/26 (26%), Positives = 17/26 (65%)
Query: 186 IWDMLATL--LASGSNDKTVTIWDMR 209
+W + A + SG++D+ + +WD++
Sbjct: 671 VWSIAADTFRIISGAHDRLIKVWDLQ 696
Score = 36 (17.7 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 183 TVTIWDMLATLLASGSNDKTVTIWDM 208
T T + T + + D T+ +WD+
Sbjct: 630 TATTPNSYPTHFLTSALDNTIKLWDV 655
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 181 (68.8 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 50/163 (30%), Positives = 77/163 (47%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG----RIEGWGR--VPACPL 86
V FSPD + L + +D+TV +W D + ++ +GHTQ + G V A
Sbjct: 523 VSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSY--KGHTQPVWDVKFSPLGHYFVTASHD 580
Query: 87 CRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
R+++T I P R+ H + V V F+ S+ + +GS DKT ++WD
Sbjct: 581 QTARLWAT--DHIYPLRI---------FAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWD 629
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
V + C++ HT V C S D LASG D + +WD+
Sbjct: 630 VHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDI 672
Score = 107 (42.7 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRY-VTCCTFSCDDSLL 175
HT++V + + L SG D + +WD+ S +K++ H R + FS D ++L
Sbjct: 642 HTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVL 701
Query: 176 ASGSNDKTVTIWDM 189
SG D +V +WD+
Sbjct: 702 VSGCADNSVRVWDV 715
Score = 106 (42.4 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H+ V V F+ + L+S S DKTV+LW + + T + + + HT+ V FS
Sbjct: 516 HSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFV 575
Query: 177 SGSNDKTVTIW 187
+ S+D+T +W
Sbjct: 576 TASHDQTARLW 586
Score = 68 (29.0 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSD 57
+NM C+ F+ D+ L+A G D + +W D
Sbjct: 462 NNMTCIEFNDDSTLVAAGFQDSYIKLWSLD 491
Score = 54 (24.1 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 192 TLLASGSNDKTVTIWDMRGN 211
T+L SG D +V +WD++ N
Sbjct: 699 TVLVSGCADNSVRVWDVKKN 718
Score = 44 (20.5 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 194 LASGSNDKTVTIWDM 208
LASG D + +WD+
Sbjct: 658 LASGGEDGIICVWDI 672
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 180 (68.4 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 59/171 (34%), Positives = 80/171 (46%)
Query: 28 SNMRCVRFSPDT-RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG----RIEGWGR-- 80
SN+ + T RLLATGGDD V VW L + T GHT +I
Sbjct: 21 SNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRHDLLT---GHTTPIESLQISAKEELI 77
Query: 81 VPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDK 140
V RV+ +I+ T +G H + + S+ F+ S + SGS+D
Sbjct: 78 VAGSQSGSIRVWDLEAAKILRTLLG-----------HKANICSLDFHPYGSFVASGSLDT 126
Query: 141 TVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLA 191
+KLWDV CI +SHT+ V C FS D LAS ++D TV +WD+ A
Sbjct: 127 DIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 177
Score = 52 (23.4 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
LLASGS+ T+ WD+
Sbjct: 203 LLASGSSSMTIRFWDL 218
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 192 (72.6 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 53/159 (33%), Positives = 79/159 (49%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
++ V FSPD + LA+G + TV +W L+ +T + GH+Q + P +
Sbjct: 921 VKSVAFSPDGKKLASGSEKNTVKLWNPATGELL-QTLE-GHSQS-VRSVAFSPDGKQLAS 977
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
T +K T G+ +T H + +V F+ LVSGS D T+KLWD+ +
Sbjct: 978 SSSDTTIKLWNSTT----GELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLAT 1033
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
++LE H+R V FS DD LAS S D T+ +WD
Sbjct: 1034 SELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWD 1072
Score = 189 (71.6 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 54/171 (31%), Positives = 81/171 (47%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R V FSPD +LLA+ D T+ +W L E GR + V P +
Sbjct: 1089 VRSVTFSPDGKLLASNSYDGTIKLWNP----LTGELQQT--LTGRSDWVDSVAFSPDGK- 1141
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
++ S + I G+ +T+ H+ + SV F+ LL SGS D+T KLWD +
Sbjct: 1142 QLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPAT 1201
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSND 200
++ E H+++V FS D LLAS S +T+ +WD + L ND
Sbjct: 1202 GELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLND 1252
Score = 188 (71.2 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 51/177 (28%), Positives = 83/177 (46%)
Query: 29 NMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR 88
++R V FSPD +LLA+ D T+ VW L + +GR GW + A
Sbjct: 878 SVRSVAFSPDGKLLASSSLDSTIKVWNPATGEL------QQSLEGR-SGWVKSVAFSPDG 930
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
++ S K + G+ +T+ H+ +V SV F+ L S S D T+KLW+
Sbjct: 931 KKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNST 990
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTI 205
+ +T + H ++ FS D L SGS+D T+ +WD+ + L D + ++
Sbjct: 991 TGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSV 1047
Score = 186 (70.5 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 53/164 (32%), Positives = 82/164 (50%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC 84
H+G + V FSPD + L +G D+TV +W +++T D GH+ G +E P
Sbjct: 749 HLGP-VESVVFSPDGKQLVSGSYDDTVKIW-DPATGELLQTLD-GHS-GTVESLAFSPDG 804
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKL 144
L + + + + + G Q E G H ++ SV F L S S D T+K+
Sbjct: 805 KLLASGSYDNTI-DLWDSATGELLQTFE--G-HPHSIWSVAFAPDGKELASASDDSTIKI 860
Query: 145 WDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
WD+ + +TL+SH++ V FS D LLAS S D T+ +W+
Sbjct: 861 WDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWN 904
Score = 179 (68.1 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 51/162 (31%), Positives = 78/162 (48%)
Query: 29 NMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR 88
++R V FSPD + LA+ D T+ +W S L + +GH + W R A
Sbjct: 962 SVRSVAFSPDGKQLASSSSDTTIKLWNSTTGEL--QQTFKGH-----DLWIRAVAFSPDG 1014
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
+ S I + +++ H+ +V +V F+ L S S+D T+KLWD
Sbjct: 1015 KHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSA 1074
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML 190
+ +TLE H++ V TFS D LLAS S D T+ +W+ L
Sbjct: 1075 TGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPL 1116
Score = 175 (66.7 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 54/172 (31%), Positives = 84/172 (48%)
Query: 17 ELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE 76
EL+ H G+ + + FSPD +LLA+G D T+ +W S L+ +T + GH
Sbjct: 783 ELLQTLDGHSGT-VESLAFSPDGKLLASGSYDNTIDLWDSATGELL-QTFE-GHPHSI-- 837
Query: 77 GWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSG 136
W V P + + S I G+ +T+ H+ +V SV F+ LL S
Sbjct: 838 -WS-VAFAPDGK-ELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASS 894
Query: 137 SVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
S+D T+K+W+ + ++LE + +V FS D LASGS TV +W+
Sbjct: 895 SLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWN 946
Score = 169 (64.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 54/181 (29%), Positives = 84/181 (46%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R V FSPD + L +G DD T+ +W L D H++ + V P +
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLED--HSRS-VHA---VAFSPDDK- 1057
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
++ S+ + I G+ T+ H+ V SV F+ LL S S D T+KLW+ +
Sbjct: 1058 QLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLT 1117
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD-----MLATLLASGSNDKTVT 204
+TL + +V FS D LASG D T+ +WD +L TL G +D+ +
Sbjct: 1118 GELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTL--EGHSDRIQS 1175
Query: 205 I 205
+
Sbjct: 1176 V 1176
Score = 168 (64.2 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 38/109 (34%), Positives = 54/109 (49%)
Query: 100 IPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESH 159
+P + + +T+ H V SV F+ LVSGS D TVK+WD + ++TL+ H
Sbjct: 732 LPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGH 791
Query: 160 TRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIWDM 208
+ V FS D LLASGS D T+ +WD L +IW +
Sbjct: 792 SGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSV 840
Score = 152 (58.6 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 33/85 (38%), Positives = 47/85 (55%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G+ +T+ H+ V S+ F+ LL SGS D T+ LWD + ++T E H +
Sbjct: 782 GELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVA 841
Query: 168 FSCDDSLLASGSNDKTVTIWDMLAT 192
F+ D LAS S+D T+ IWD LAT
Sbjct: 842 FAPDGKELASASDDSTIKIWD-LAT 865
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 52/178 (29%), Positives = 75/178 (42%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V FSPD + LA+G D T+ +W S L+ +T + GH+ RI+ P L + +
Sbjct: 1134 VAFSPDGKQLASGYYDSTIKLWDSATGELL-QTLE-GHSD-RIQSVVFSPDGKLLASGSY 1190
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
K P G+ + H+ V SV F+ LL S S +T+KLWD +
Sbjct: 1191 DQTAKLWDPAT----GELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGEL 1246
Query: 153 IKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIWDMRG 210
++TL FS D + LAS T IWD L + +W G
Sbjct: 1247 LQTLNDPDESAGSVAFSPDGNRLASVDIFDT-KIWDPATGELLQALKGHSKWVWSRTG 1303
Score = 53 (23.7 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 194 LASGSNDKTVTIWDM 208
L SGS+D T+ +WD+
Sbjct: 1017 LVSGSDDNTIKLWDL 1031
Score = 45 (20.9 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 194 LASGSNDKTVTIWD 207
LAS S D T+ +WD
Sbjct: 1059 LASSSLDSTIKLWD 1072
Score = 45 (20.9 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 193 LLASGSNDKTVTIWD 207
LLAS S D T+ +W+
Sbjct: 890 LLASSSLDSTIKVWN 904
Score = 43 (20.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 194 LASGSNDKTVTIWD 207
LAS S+D T+ +W+
Sbjct: 975 LASSSSDTTIKLWN 988
Score = 43 (20.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 194 LASGSNDKTVTIWD 207
LASGS TV +W+
Sbjct: 933 LASGSEKNTVKLWN 946
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 171 (65.3 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 52/160 (32%), Positives = 78/160 (48%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
CV FSP LLA+G D+TV +W + T R HT + V C ++ V
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIWIPNVKG--ESTVFRAHT-ATVRS---VHFCSDGQSLV 119
Query: 92 FSTFVKQIIPTRV-GVYGQDSE-TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
++ K + +V + Q ++ +H + V RF+ L+VS S DKTVKLWD S
Sbjct: 120 TASDDKTV---KVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTS 176
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
C+ + H +VT F + +A+ S D TV +WD+
Sbjct: 177 RECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDV 216
Score = 169 (64.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 54/157 (34%), Positives = 72/157 (45%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V FS +T+ LA+G D + VW S GH + P+ L +
Sbjct: 25 VDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRF--AGHKDA-VTCVNFSPSGHLLASGSR 81
Query: 93 STFVKQIIPTRVGVYGQDSETVGR-HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
V+ IP V G+ TV R HT+ V SV F LV+ S DKTVK+W
Sbjct: 82 DKTVRIWIPN---VKGES--TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQK 136
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ +L H +V C FS D L+ S S+DKTV +WD
Sbjct: 137 FLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD 173
Score = 149 (57.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 46/165 (27%), Positives = 72/165 (43%)
Query: 23 SVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVP 82
S HI +RC RFSPD RL+ + DD+TV +W + + G G + P
Sbjct: 142 SQHINW-VRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG---GFVTYVDFHP 197
Query: 83 ACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTV 142
+ VK + R Q + H++AV ++ F+ + L++ S D T+
Sbjct: 198 SGTCIAAASMDNTVK-VWDVRTHRLLQHYQL---HSAAVNALSFHPSGNYLLTASSDSTL 253
Query: 143 KLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
K+ D+ + TL H T FS ASG +D+ V +W
Sbjct: 254 KILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 138 (53.6 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 30/71 (42%), Positives = 38/71 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H A+TSV F+ + L SGS+D + +W + + H VTC FS LLA
Sbjct: 18 HRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLA 77
Query: 177 SGSNDKTVTIW 187
SGS DKTV IW
Sbjct: 78 SGSRDKTVRIW 88
Score = 105 (42.0 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H VT V F+ + + + S+D TVK+WDV + ++ + H+ V +F + L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLL 245
Query: 177 SGSNDKTVTIWDML 190
+ S+D T+ I D++
Sbjct: 246 TASSDSTLKILDLM 259
Score = 62 (26.9 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVW 54
+ +R V F D + L T DD+TV VW
Sbjct: 104 ATVRSVHFCSDGQSLVTASDDKTVKVW 130
Score = 54 (24.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 193 LLASGSNDKTVTIWDMRGNLSVDVPLNYC 221
L+ S S+DKTV +WD V +YC
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVH---SYC 184
Score = 53 (23.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 192 TLLASGSNDKTVTIWDMR 209
T +A+ S D TV +WD+R
Sbjct: 200 TCIAAASMDNTVKVWDVR 217
Score = 43 (20.2 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 194 LASGSNDKTVTIW 206
L + S+DKTV +W
Sbjct: 118 LVTASDDKTVKVW 130
Score = 40 (19.1 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 183 TVTIWDMLATLLASGSNDKTVTIWDMRGNLSV 214
T + ASG +D+ V +W + N V
Sbjct: 275 TTVAFSRTGEYFASGGSDEQVMVW--KSNFDV 304
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 185 (70.2 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 45/124 (36%), Positives = 70/124 (56%)
Query: 105 GVY-GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
G Y G +T+ H+ ++ V ++ SS LVS S DKT+K+WD+ S C+KTL+ H+ +V
Sbjct: 67 GAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFV 126
Query: 164 TCCTFSCDDSLLASGSNDKTVTIWDM-----LATLLASGSNDKTVTIWDMRGNLSVDVPL 218
CC F+ +L+ SGS D++V IW++ L TL A V ++ G+L V
Sbjct: 127 FCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVN-FNCNGSLIVSGSY 185
Query: 219 NYCC 222
+ C
Sbjct: 186 DGLC 189
Score = 176 (67.0 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 47/157 (29%), Positives = 80/157 (50%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPACPLCRTRV 91
V+FSP+ LA+ D + +W + D + + GH+ + W + R+
Sbjct: 45 VKFSPNGEWLASSAADALIIIWGAYDGNC--KKTLYGHSLEISDVAWSSDSS------RL 96
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
S + + G+ +T+ H+ V FN S+L+VSGS D++VK+W+V +
Sbjct: 97 VSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGK 156
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
C+KTL +H+ ++ F+C+ SL+ SGS D IWD
Sbjct: 157 CLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWD 193
Score = 142 (55.0 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H++A++SV+F+ L S + D + +W C KTL H+ ++ +S D
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDS 93
Query: 173 SLLASGSNDKTVTIWDM 189
S L S S+DKT+ +WDM
Sbjct: 94 SRLVSASDDKTLKVWDM 110
Score = 140 (54.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V +S D+ L + DD+T+ VW ++T +GH+ + P L + F
Sbjct: 87 VAWSSDSSRLVSASDDKTLKVWDMRS-GKCLKTL-KGHSDF-VFCCDFNPPSNLIVSGSF 143
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
VK I + G + +T+ H+ +++V FN SL+VSGS D ++WD S C
Sbjct: 144 DESVK-IWEVKTG---KCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQC 199
Query: 153 IKTL-ESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
++TL + V+ FS + + + + D T+ +WD
Sbjct: 200 LRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWD 236
Score = 106 (42.4 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 121 VTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHT--RYVTCCTFSCDD-SLLAS 177
V+ V+F+ +++ ++D T+KLWD C+KT H +Y +FS + S
Sbjct: 211 VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVS 270
Query: 178 GSNDKTVTIWDM 189
GS D V IW++
Sbjct: 271 GSEDNMVYIWNL 282
Score = 89 (36.4 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGS--NDKTVTIW 187
+VSGS D V +W++ + ++ L+ HT V +++AS + NDKT+ +W
Sbjct: 268 VVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 59 (25.8 bits), Expect = 7.0e-07, Sum P(3) = 7.0e-07
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
C F+P + L+ +G DE+V +W
Sbjct: 128 CCDFNPPSNLIVSGSFDESVKIW 150
Score = 40 (19.1 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 193 LLASGS--NDKTVTIW 206
++AS + NDKT+ +W
Sbjct: 309 IIASAALENDKTIKVW 324
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 167 (63.8 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 49/162 (30%), Positives = 73/162 (45%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
CV FSP LLA+G D+TV +W + T R HT V + C
Sbjct: 97 CVNFSPSGHLLASGSRDKTVRIWVPNIKG--ESTVFRAHT-------ATVRSVHFCSDG- 146
Query: 92 FSTFVKQIIPTRVGVYGQDSE----TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV 147
+FV + V+ + ++ +H + V +F+ L+VS S DKTVKLWD
Sbjct: 147 -QSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 205
Query: 148 PSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S C+ + H +VT F + +A+ D TV +WD+
Sbjct: 206 TSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDV 247
Score = 165 (63.1 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 48/157 (30%), Positives = 68/157 (43%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
CV FS + + LA+G D + VW S GH + P+ L +
Sbjct: 55 CVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFT--GHKDA-VTCVNFSPSGHLLASGS 111
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
V+ +P G +S HT+ V SV F V+ S DKT+K+W
Sbjct: 112 RDKTVRIWVPNIKG----ESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQK 167
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ +L H +V C FS D L+ S S+DKTV +WD
Sbjct: 168 FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
Score = 148 (57.2 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 46/165 (27%), Positives = 72/165 (43%)
Query: 23 SVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVP 82
S HI +RC +FSPD RL+ + DD+TV +W + + G G + P
Sbjct: 173 SQHINW-VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG---GFVTYVDFHP 228
Query: 83 ACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTV 142
+ VK + R Q + H++AV ++ F+ + LV+ S D T+
Sbjct: 229 SGTCVAAAGMDNTVK-VWDVRTHRLLQHYQL---HSAAVNALSFHPSGNYLVTASSDSTL 284
Query: 143 KLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
K+ D+ + TL H T FS ASG +D+ V +W
Sbjct: 285 KILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 134 (52.2 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 30/71 (42%), Positives = 36/71 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H AVT V F+ L SGS+D + +W + + H VTC FS LLA
Sbjct: 49 HRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLA 108
Query: 177 SGSNDKTVTIW 187
SGS DKTV IW
Sbjct: 109 SGSRDKTVRIW 119
Score = 101 (40.6 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H VT V F+ + + + +D TVK+WDV + ++ + H+ V +F + L
Sbjct: 217 HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 276
Query: 177 SGSNDKTVTIWDML 190
+ S+D T+ I D++
Sbjct: 277 TASSDSTLKILDLM 290
Score = 57 (25.1 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVW 54
+ +R V F D + T DD+T+ VW
Sbjct: 135 ATVRSVHFCSDGQSFVTASDDKTIKVW 161
Score = 54 (24.1 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 193 LLASGSNDKTVTIWDMRGNLSVDVPLNYC 221
L+ S S+DKTV +WD V +YC
Sbjct: 190 LIVSASDDKTVKLWDKTSRECVH---SYC 215
Score = 48 (22.0 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 192 TLLASGSNDKTVTIWDMR 209
T +A+ D TV +WD+R
Sbjct: 231 TCVAAAGMDNTVKVWDVR 248
Score = 40 (19.1 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 183 TVTIWDMLATLLASGSNDKTVTIWDMRGNLSV 214
T + ASG +D+ V +W + N V
Sbjct: 306 TTVAFSRTGEYFASGGSDEQVMVW--KSNFDV 335
Score = 38 (18.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 196 SGSNDKTVTIW 206
+ S+DKT+ +W
Sbjct: 151 TASDDKTIKVW 161
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 160 (61.4 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 40/103 (38%), Positives = 54/103 (52%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V S+ F+ L S D+ +KLWD+ S T K L HT +T TFS D SL+A
Sbjct: 485 HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIA 544
Query: 177 SGSNDKTVTIWDMLATLL---ASGSNDKTVTIW--DMRGNLSV 214
S S D +V +WD+ T A GS+ + V ++ M LSV
Sbjct: 545 SASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQMSNVLSV 587
Score = 121 (47.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + V V+F+ S+ L +GS DKTV+LW ++ H V FS + LA
Sbjct: 443 HLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLA 502
Query: 177 SGSNDKTVTIWDMLATLL 194
S D+ + +WD+ + L
Sbjct: 503 SAGEDQRLKLWDLASGTL 520
Score = 104 (41.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/71 (32%), Positives = 33/71 (46%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V + + S SGS D+T +LW ++ H V C F + + LA
Sbjct: 401 HAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLA 460
Query: 177 SGSNDKTVTIW 187
+GS DKTV +W
Sbjct: 461 TGSTDKTVRLW 471
Score = 100 (40.3 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G + + + H V S RF SS L+S S D +++ WD+ S T + H V
Sbjct: 350 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLD 409
Query: 168 FSCDDSLLASGSNDKTVTIW 187
S ASGS+D+T +W
Sbjct: 410 ISPYSLYFASGSHDRTARLW 429
Score = 79 (32.9 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDD-LSLIMETNDRG 69
H+ +++ CV+F P++ LATG D+TV +W + S+ + T RG
Sbjct: 443 HL-ADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRG 487
Score = 56 (24.8 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+ SPD++LLA G D+ + +W
Sbjct: 289 LNTAEISPDSKLLAAGFDNSCIKLW 313
Score = 55 (24.4 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 194 LASGSNDKTVTIWD-MRGN 211
LA+GS DKTV +W +GN
Sbjct: 459 LATGSTDKTVRLWSAQQGN 477
Score = 41 (19.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 36 SPDTRLLATGGDDETVTVWRSD 57
SP + A+G D T +W D
Sbjct: 411 SPYSLYFASGSHDRTARLWSFD 432
>UNIPROTKB|Q8NAA4 [details] [associations]
symbol:ATG16L2 "Autophagy-related protein 16-2"
species:9606 "Homo sapiens" [GO:0006914 "autophagy" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000112569
HOVERGEN:HBG050534 InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914
EMBL:AK093017 EMBL:AK090597 EMBL:CH471076 EMBL:BC036713
EMBL:BC137489 EMBL:BC137490 EMBL:BC142718 EMBL:BC146660
EMBL:AL832974 IPI:IPI00300536 IPI:IPI00892538 IPI:IPI00892678
RefSeq:NP_203746.1 UniGene:Hs.653186 ProteinModelPortal:Q8NAA4
SMR:Q8NAA4 IntAct:Q8NAA4 PhosphoSite:Q8NAA4 DMDM:189027648
PRIDE:Q8NAA4 Ensembl:ENST00000321297 GeneID:89849 KEGG:hsa:89849
UCSC:uc001otd.3 CTD:89849 GeneCards:GC11P072525 H-InvDB:HIX0009913
HGNC:HGNC:25464 HPA:HPA045444 neXtProt:NX_Q8NAA4
PharmGKB:PA142672575 InParanoid:Q8NAA4 OrthoDB:EOG44F68R
PhylomeDB:Q8NAA4 GenomeRNAi:89849 NextBio:76342 ArrayExpress:Q8NAA4
Bgee:Q8NAA4 CleanEx:HS_ATG16L2 Genevestigator:Q8NAA4 Uniprot:Q8NAA4
Length = 619
Score = 172 (65.6 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 50/164 (30%), Positives = 77/164 (46%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC 84
H+ S + VRF P++ LLATGG D + +W + +E N +G V
Sbjct: 335 HL-SEVNAVRFGPNSSLLATGGADRLIHLWNV--VGSRLEANQT--LEGAGGSITSVDFD 389
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKL 144
P + +T+ + +VG Q ET+ H VT+ +F V+GS D+TVK
Sbjct: 390 PSGYQVLAATYNQAAQLWKVGE-AQSKETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKE 448
Query: 145 WDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
WD+ C +T+ + Y C C D ++ SG ND+ + WD
Sbjct: 449 WDLGRAYCSRTINVLS-Y--CNDVVCGDHIIISGHNDQKIRFWD 489
Score = 100 (40.3 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 34/126 (26%), Positives = 54/126 (42%)
Query: 81 VPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDK 140
+ P R ++ V +PTR QD + H S V +VRF SSLL +G D+
Sbjct: 305 IGGAPEQRYQIIPVCVAARLPTRA----QD--VLDAHLSEVNAVRFGPNSSLLATGGADR 358
Query: 141 TVKLWDVPS--LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW---DMLATLLA 195
+ LW+V L +TLE +T F + + + ++ +W + +
Sbjct: 359 LIHLWNVVGSRLEANQTLEGAGGSITSVDFDPSGYQVLAATYNQAAQLWKVGEAQSKETL 418
Query: 196 SGSNDK 201
SG DK
Sbjct: 419 SGHKDK 424
Score = 53 (23.7 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 193 LLASGSNDKTVTIWDMRG 210
++ SG ND+ + WD RG
Sbjct: 475 IIISGHNDQKIRFWDSRG 492
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 170 (64.9 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 56/180 (31%), Positives = 84/180 (46%)
Query: 22 GSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIME-TNDRGHT--------- 71
G+V GS + C FSP TG +TVW L E +D G T
Sbjct: 135 GNVKDGSLVACA-FSPGGNFFVTGSSCGDLTVWDDKMRCLCNEKAHDLGVTCCDISSHPV 193
Query: 72 -QGR-IEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHK 129
G G ++ +C ++ F+ + +G + T+ H++ V + F++
Sbjct: 194 SDGEHASGCFQMASCGQ-DNKIKVWFI--LFADFLGGELRYKCTLSGHSAPVLTCAFSYD 250
Query: 130 SSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+LVSGSVDK V +++ + + TL HTRYVT C F+ LA+GS DKTV IW +
Sbjct: 251 GQMLVSGSVDKCVIIYETNTGNILHTLSQHTRYVTTCAFAPCSLFLATGSMDKTVHIWKL 310
Score = 109 (43.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 28/78 (35%), Positives = 40/78 (51%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCI--KTLESHTRYVTCCTFSC 170
T+ H+ V F+ SS L + S+DKT++++ + T + L+ HT V CC FS
Sbjct: 7 TLTDHSDDVNCCAFS--SSCLATCSLDKTIRIYSLNDFTELPYSPLKGHTYAVHCCCFSP 64
Query: 171 DDSLLASGSNDKTVTIWD 188
LAS S D IWD
Sbjct: 65 SGHTLASCSTDGATIIWD 82
Score = 109 (43.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 119 SAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASG 178
S V RF+ +S+ LVSG+ D +V LW+V S+ ++ + C FS + +G
Sbjct: 98 SPVRVCRFSPESTYLVSGAADGSVVLWNVHSMKFYRSGNVKDGSLVACAFSPGGNFFVTG 157
Query: 179 SNDKTVTIWD-MLATLLASGSNDKTVTIWDM 208
S+ +T+WD + L ++D VT D+
Sbjct: 158 SSCGDLTVWDDKMRCLCNEKAHDLGVTCCDI 188
Score = 93 (37.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 24/74 (32%), Positives = 34/74 (45%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRY-VTCCTFSCDDSLL 175
HT AV F+ L S S D +WD + LE T V C FS + + L
Sbjct: 53 HTYAVHCCCFSPSGHTLASCSTDGATIIWDTSDGRMLAVLEQPTGSPVRVCRFSPESTYL 112
Query: 176 ASGSNDKTVTIWDM 189
SG+ D +V +W++
Sbjct: 113 VSGAADGSVVLWNV 126
Score = 51 (23.0 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 194 LASGSNDKTVTIWDM 208
LA+GS DKTV IW +
Sbjct: 296 LATGSMDKTVHIWKL 310
Score = 48 (22.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 29 NMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHT 71
++ C FS + LAT D+T+ ++ +D + + + +GHT
Sbjct: 14 DVNCCAFS--SSCLATCSLDKTIRIYSLNDFTELPYSPLKGHT 54
Score = 42 (19.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 193 LLASGSNDKTVTIWDMR-GNL 212
+L SGS DK V I++ GN+
Sbjct: 253 MLVSGSVDKCVIIYETNTGNI 273
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 159 (61.0 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 30/75 (40%), Positives = 49/75 (65%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
HT+ V+S+ FN +LLVSGS D+TV++W++ TC++ L +H+ + + S D +L A
Sbjct: 137 HTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCA 196
Query: 177 SGSNDKTVTIWDMLA 191
+ S D IWD+L+
Sbjct: 197 TASYDGMARIWDVLS 211
Score = 139 (54.0 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H ++ V++ S L S S DKT+++WD ++ L+ HT YV+ F+
Sbjct: 91 TLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLG 150
Query: 173 SLLASGSNDKTVTIWDM 189
+LL SGS D+TV IW++
Sbjct: 151 TLLVSGSWDETVRIWNL 167
Score = 81 (33.6 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 29/109 (26%), Positives = 49/109 (44%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTL-ESHTRYVTCCTFSCDDS-L 174
H+ + SV + +L + S D ++WDV S C+KTL E ++ F+ + L
Sbjct: 179 HSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYL 238
Query: 175 LASGSNDKTVTIWDM----LATLLASGSNDKTVTIWDMRGNLSVDVPLN 219
L S N + + +WD + + S N + WD S ++P N
Sbjct: 239 LVSNLNSQ-IRLWDYRRNRVVRIFDSHVNTRYSMSWDCYS--SKNIPKN 284
Score = 71 (30.1 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 29 NMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG 73
++ CV SP+ R +AT D T+ +W + L+ +E GH +G
Sbjct: 56 SVTCVSVSPNKRWIATSSSDGTIKIWSA--LTFRLECTLFGHYRG 98
Score = 51 (23.0 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 33 VRFSPDTRLLATGGDDETVTVW 54
V+++ ++ LA+ DD+T+ +W
Sbjct: 102 VKWATGSKYLASASDDKTIRIW 123
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 172 (65.6 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 32/81 (39%), Positives = 46/81 (56%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G+ T+ HT+AV + F+ +LL S S D T+KLWD + C+KTL H V+C
Sbjct: 138 GEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVR 197
Query: 168 FSCDDSLLASGSNDKTVTIWD 188
F+ L S S DKT+ +W+
Sbjct: 198 FTPSGDQLISSSRDKTIKVWE 218
Score = 153 (58.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 112 ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD 171
+T+ H V+ VRF L+S S DKT+K+W+ + CIKTL H +V T S D
Sbjct: 184 KTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSED 243
Query: 172 DSLLASGSNDKTVTIWDML 190
S +AS SND+T+ W+++
Sbjct: 244 GSCIASCSNDQTIKTWNIV 262
Score = 140 (54.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + + SV+F+ SL+VS S D T+K+WD S +TL+ HT V F +LLA
Sbjct: 105 HRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLA 164
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 165 SCSADLTIKLWD 176
Score = 140 (54.3 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTL-ESHTRYVTCCTFSCDDSLL 175
H + V +VRF+ L+S DKT+++WD+ CIKT+ E+HT +++C F + +
Sbjct: 345 HDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHI 404
Query: 176 ASGSNDKTVTIWDM 189
A+G D + +W +
Sbjct: 405 ATGGVDDVIKVWKL 418
Score = 113 (44.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFS-CDDSLLASGSNDKTVTIWDM 189
L +GS DKT+K+W++ + C+ T H +V F C LL+ G +DKT+ +WD+
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVG-DDKTIRVWDI 375
Score = 71 (30.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 33/122 (27%), Positives = 51/122 (41%)
Query: 20 LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWG 79
L G H N+ CVRF+P L + D+T+ VW + ++T GH E W
Sbjct: 186 LHGHDH---NVSCVRFTPSGDQLISSSRDKTIKVWEAAT-GYCIKTLV-GH-----EDWV 235
Query: 80 RVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVD 139
R + + S Q I T V G+ T H+ V + F+ + + + GS+
Sbjct: 236 RKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLL 295
Query: 140 KT 141
T
Sbjct: 296 ST 297
Score = 44 (20.5 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 194 LASGSNDKTVTIWDM 208
L S +DKT+ +WD+
Sbjct: 361 LLSVGDDKTIRVWDI 375
Score = 43 (20.2 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 194 LASGSNDKTVTIWDM 208
+AS SND+T+ W++
Sbjct: 247 IASCSNDQTIKTWNI 261
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 201 (75.8 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 57/149 (38%), Positives = 77/149 (51%)
Query: 41 LLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWG-RVPACPLCRTRVFSTFVKQI 99
+LA+G DDETV +W D + ++ GH+ GW V P R +F K +
Sbjct: 709 VLASGSDDETVRLW--DPATGSLQQTLEGHS-----GWVLSVAFSPDGRLLASGSFDKTV 761
Query: 100 IPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESH 159
G +T+ H++ V SV F+ LL SGS DKTV+LWD + + +TL H
Sbjct: 762 RLWDPAT-GSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGH 820
Query: 160 TRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ V FS D LLASGS DKTV +WD
Sbjct: 821 SDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
Score = 157 (60.3 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 53/146 (36%), Positives = 72/146 (49%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGR-VPACPLCRTRV 91
V FSPD RLLA+G D+TV +W D + ++ RGH+ W R V P R
Sbjct: 743 VAFSPDGRLLASGSFDKTVRLW--DPATGSLQQTLRGHSN-----WVRSVAFSPDGRLLA 795
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
+F K + G +T+ H+ V SV F+ LL SGS DKTV+LWD + T
Sbjct: 796 SGSFDKTVRLWDPAT-GSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGT 854
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLAS 177
+TL VT FS D S +++
Sbjct: 855 LQQTLIIKGT-VTELQFSQDGSYIST 879
Score = 148 (57.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 35/82 (42%), Positives = 51/82 (62%)
Query: 107 YGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCC 166
+G + +T+ H+++V +V L SGS D+TV+LWD + + +TLE H+ +V
Sbjct: 692 WGAELQTLEGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSV 743
Query: 167 TFSCDDSLLASGSNDKTVTIWD 188
FS D LLASGS DKTV +WD
Sbjct: 744 AFSPDGRLLASGSFDKTVRLWD 765
Score = 61 (26.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 12/15 (80%), Positives = 13/15 (86%)
Query: 193 LLASGSNDKTVTIWD 207
LLASGS DKTV +WD
Sbjct: 835 LLASGSFDKTVRLWD 849
Score = 61 (26.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 12/15 (80%), Positives = 13/15 (86%)
Query: 193 LLASGSNDKTVTIWD 207
LLASGS DKTV +WD
Sbjct: 793 LLASGSFDKTVRLWD 807
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 158 (60.7 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 39/103 (37%), Positives = 55/103 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V S+ F+ L S D+ +KLWD+ S T K L HT +T TFS D SL+A
Sbjct: 467 HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIA 526
Query: 177 SGSNDKTVTIWDMLATLLAS---GSNDKTVTIW--DMRGNLSV 214
S S D +V +WD+ T ++ GS+ + V ++ M LSV
Sbjct: 527 SASMDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQMSNVLSV 569
Score = 121 (47.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + V V+F+ S+ L +GS DKTV+LW ++ H V FS + LA
Sbjct: 425 HLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLA 484
Query: 177 SGSNDKTVTIWDMLATLL 194
S D+ + +WD+ + L
Sbjct: 485 SAGEDQRLKLWDLASGTL 502
Score = 107 (42.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 24/71 (33%), Positives = 33/71 (46%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V V + S SGS D+T +LW ++ H V C F + + LA
Sbjct: 383 HAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLA 442
Query: 177 SGSNDKTVTIW 187
+GS DKTV +W
Sbjct: 443 TGSTDKTVRLW 453
Score = 101 (40.6 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G + + + H V S RF SS L+S S D +++ WD+ S T + H V
Sbjct: 332 GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVD 391
Query: 168 FSCDDSLLASGSNDKTVTIW 187
S ASGS+D+T +W
Sbjct: 392 ISPYSLYFASGSHDRTARLW 411
Score = 79 (32.9 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDD-LSLIMETNDRG 69
H+ +++ CV+F P++ LATG D+TV +W + S+ + T RG
Sbjct: 425 HL-ADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRG 469
Score = 55 (24.4 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 194 LASGSNDKTVTIWD-MRGN 211
LA+GS DKTV +W +GN
Sbjct: 441 LATGSTDKTVRLWSAQQGN 459
Score = 52 (23.4 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+ SP+++LLA G D+ + +W
Sbjct: 271 LNTAEISPESKLLAAGFDNSCIKLW 295
Score = 43 (20.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSD 57
V SP + A+G D T +W D
Sbjct: 390 VDISPYSLYFASGSHDRTARLWSFD 414
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 171 (65.3 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 37/107 (34%), Positives = 58/107 (54%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + +V+F+H++ +VS S D+T+++W+ S TCI L H YV C +F + L+
Sbjct: 92 HLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVV 151
Query: 177 SGSNDKTVTIWDMLATLLASGSN-DKTVTIWDMRGNL--SVDVPLNY 220
S S D+TV +WD+ A S S D + M +L VD + Y
Sbjct: 152 SASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLFGGVDAIVKY 198
Score = 124 (48.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 31/115 (26%), Positives = 53/115 (46%)
Query: 74 RIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL 133
R++G P P + S + Q+ R+G + H V V F++ L
Sbjct: 11 RVKGLSFHPKRPWILASLHSGVI-QLWDYRMGTL---IDRFDEHEGPVRGVHFHNSQPLF 66
Query: 134 VSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
VSG D +K+W+ + C+ TL H Y+ F ++ + S S+D+T+ IW+
Sbjct: 67 VSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWN 121
Score = 108 (43.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V F+ L+VSG+ D+ VKLW + + TL H V+ F +
Sbjct: 203 HDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDI 262
Query: 175 LASGSNDKTVTIWD 188
+ S S DK++ +WD
Sbjct: 263 IVSNSEDKSIRVWD 276
Score = 57 (25.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 15 GTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
GT LI R H G +R V F L +GGDD + VW
Sbjct: 41 GT-LIDRFDEHEGP-VRGVHFHNSQPLFVSGGDDYKIKVW 78
Score = 53 (23.7 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 23 SVHIGSN--MRCVRFSPDTRLLATGGDDETVTVW 54
SV G N + C F P L+ + D+TV VW
Sbjct: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Score = 51 (23.0 bits), Expect = 0.00073, Sum P(2) = 0.00072
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGH 70
+R V+F + + + DD+T+ +W + I H
Sbjct: 96 IRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNH 136
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 157 (60.3 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 39/103 (37%), Positives = 55/103 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V S+ F+ L S D+ +KLWD+ S T K L HT +T TFS D SL+A
Sbjct: 463 HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVA 522
Query: 177 SGSNDKTVTIWDMLATLL---ASGSNDKTVTIW--DMRGNLSV 214
S S D +V +WD+ ++ A GS+ + V ++ M LSV
Sbjct: 523 SASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSV 565
Score = 121 (47.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + V V+F+ S+ L +GS DKTV+LW ++ H V FS + LA
Sbjct: 421 HLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLA 480
Query: 177 SGSNDKTVTIWDMLATLL 194
S D+ + +WD+ + L
Sbjct: 481 SAGEDQRLKLWDLASGTL 498
Score = 99 (39.9 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V + + S S S D+T +LW ++ H V C F + + LA
Sbjct: 379 HAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLA 438
Query: 177 SGSNDKTVTIW 187
+GS DKTV +W
Sbjct: 439 TGSTDKTVRLW 449
Score = 97 (39.2 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 25/80 (31%), Positives = 37/80 (46%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G + + + H V S RF SS L+S S D +++ WD+ S T + H V
Sbjct: 328 GTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLD 387
Query: 168 FSCDDSLLASGSNDKTVTIW 187
S AS S+D+T +W
Sbjct: 388 ISPHSLYFASASHDRTARLW 407
Score = 79 (32.9 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDD-LSLIMETNDRG 69
H+ +++ CV+F P++ LATG D+TV +W + S+ + T RG
Sbjct: 421 HL-ADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRG 465
Score = 55 (24.4 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 36 SPDTRLLATGGDDETVTVW 54
SPD++LLA G D+ + +W
Sbjct: 273 SPDSKLLAAGFDNSCIKLW 291
Score = 55 (24.4 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 194 LASGSNDKTVTIWD-MRGN 211
LA+GS DKTV +W +GN
Sbjct: 437 LATGSTDKTVRLWSTQQGN 455
Score = 37 (18.1 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 36 SPDTRLLATGGDDETVTVWRSD 57
SP + A+ D T +W D
Sbjct: 389 SPHSLYFASASHDRTARLWSFD 410
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 157 (60.3 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 39/103 (37%), Positives = 53/103 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V S+ F+ L S D+ +KLWD+ S T K L HT +T TFS D L+A
Sbjct: 467 HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIA 526
Query: 177 SGSNDKTVTIWDMLATLL---ASGSNDKTVTIW--DMRGNLSV 214
S S D +V +WD+ T A GS+ + V ++ M LSV
Sbjct: 527 SASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSV 569
Score = 121 (47.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + V V+F+ S+ L +GS DKTV+LW ++ H V FS + LA
Sbjct: 425 HLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLA 484
Query: 177 SGSNDKTVTIWDMLATLL 194
S D+ + +WD+ + L
Sbjct: 485 SAGEDQRLKLWDLASGTL 502
Score = 104 (41.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 23/71 (32%), Positives = 33/71 (46%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V + + S SGS D+T +LW ++ H V C F + + LA
Sbjct: 383 HAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLA 442
Query: 177 SGSNDKTVTIW 187
+GS DKTV +W
Sbjct: 443 TGSTDKTVRLW 453
Score = 100 (40.3 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G + + + H V S RF SS L+S S D +++ WD+ S T + H V
Sbjct: 332 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLD 391
Query: 168 FSCDDSLLASGSNDKTVTIW 187
S ASGS+D+T +W
Sbjct: 392 ISPYSLYFASGSHDRTARLW 411
Score = 79 (32.9 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDD-LSLIMETNDRG 69
H+ +++ CV+F P++ LATG D+TV +W + S+ + T RG
Sbjct: 425 HL-ADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRG 469
Score = 56 (24.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+ SPD++LLA G D+ + +W
Sbjct: 271 LNTAEISPDSKLLAAGFDNSCIKLW 295
Score = 55 (24.4 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 194 LASGSNDKTVTIWD-MRGN 211
LA+GS DKTV +W +GN
Sbjct: 441 LATGSTDKTVRLWSAQQGN 459
Score = 41 (19.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 36 SPDTRLLATGGDDETVTVWRSD 57
SP + A+G D T +W D
Sbjct: 393 SPYSLYFASGSHDRTARLWSFD 414
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 162 (62.1 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 50/156 (32%), Positives = 73/156 (46%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V FSP+ + LATG D + +W + GH + I P L +
Sbjct: 24 VDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYV--GH-KDVITSVQFSPLGNLLASASR 80
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
++ IP + G+ SE HT+ V SV F+ L S S DK++K+W++
Sbjct: 81 DRTIRLWIPDK---RGKSSEFKA-HTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRF 136
Query: 153 IKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ +L HT +V C FS D L+ S S DKT+ IWD
Sbjct: 137 LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 145 (56.1 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 44/159 (27%), Positives = 69/159 (43%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V+FSP LLA+ D T+ +W D E + HT V + F
Sbjct: 66 VQFSPLGNLLASASRDRTIRLWIPDKRGKSSEF--KAHT-------APVRSVDFSADGQF 116
Query: 93 STFVKQIIPTRV-GVYGQDS-ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSL 150
+ +V +Y Q ++ RHT V +F+ L+VS S DKT+K+WD +
Sbjct: 117 LASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
C+ + F+ + + +AS +D TV IWD+
Sbjct: 177 QCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDI 215
Score = 145 (56.1 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 45/161 (27%), Positives = 71/161 (44%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC-P--L 86
+RC +FSPD RL+ + +D+T+ +W + + + +D G+ A P
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD-------FVGFANFVAFNPNGT 199
Query: 87 CRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
C S +I RV Q + H+ V V F+ + L++ S D T+K+ D
Sbjct: 200 CIASAGSDHTVKIWDIRVNKLLQHYQV---HSGGVNCVSFHPSGNYLITASSDGTLKILD 256
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+ I TL+ HT V +FS L SG D V +W
Sbjct: 257 LLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 135 (52.6 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 114 VGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDS 173
VG H +TSV+F+ +LL S S D+T++LW ++HT V FS D
Sbjct: 57 VG-HKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ 115
Query: 174 LLASGSNDKTVTIWDM 189
LAS S DK++ +W+M
Sbjct: 116 FLASASEDKSIKVWNM 131
Score = 123 (48.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 42/165 (25%), Positives = 73/165 (44%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ--GRIEGWGR-VPACPL 86
+R V FS D + LA+ +D+++ VW + H + GR + +C
Sbjct: 105 VRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 87 CRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLW 145
+T +++ T KQ + S+ VG V FN + + S D TVK+W
Sbjct: 165 DKTIKIWDTTNKQCV-------NNFSDFVG----FANFVAFNPNGTCIASAGSDHTVKIW 213
Query: 146 DVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML 190
D+ ++ + H+ V C +F + L + S+D T+ I D+L
Sbjct: 214 DIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLL 258
Score = 108 (43.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV-PSLTCIKTLESHTRYVTCCTFSCDDSLL 175
H +A+TSV F+ L +GS D + LW + P + + H +T FS +LL
Sbjct: 17 HKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYV-GHKDVITSVQFSPLGNLL 75
Query: 176 ASGSNDKTVTIW 187
AS S D+T+ +W
Sbjct: 76 ASASRDRTIRLW 87
Score = 58 (25.5 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 192 TLLASGSNDKTVTIWDMRGN 211
T +AS +D TV IWD+R N
Sbjct: 199 TCIASAGSDHTVKIWDIRVN 218
Score = 50 (22.7 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 193 LLASGSNDKTVTIWD 207
L+ S S DKT+ IWD
Sbjct: 158 LIVSCSEDKTIKIWD 172
Score = 50 (22.7 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 194 LASGSNDKTVTIWDM 208
LAS S DK++ +W+M
Sbjct: 117 LASASEDKSIKVWNM 131
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 165 (63.1 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 53/175 (30%), Positives = 87/175 (49%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW---RSDDLSLIMETNDRG-HTQGR 74
+L G H GS + C+++ D R++ TG D TV VW + L+ ++ N+ H R
Sbjct: 248 VLTG--HTGSVL-CLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL--R 300
Query: 75 IEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
G + C + R + + PT + + VG H +AV V F+ K +V
Sbjct: 301 FSN-GLMVTCS--KDRSIAVW-DMASPTDITLR---RVLVG-HRAAVNVVDFDDK--YIV 350
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S S D+T+K+W + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 351 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 403
Score = 144 (55.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ C++ LE H V C F D+
Sbjct: 371 TLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 426
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD+ A L
Sbjct: 427 KRIVSGAYDGKIKVWDLQAAL 447
Score = 135 (52.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
++SG D ++K+WD SL C+K L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 226 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDV 280
Score = 124 (48.7 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 51/185 (27%), Positives = 78/185 (42%)
Query: 16 TELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRI 75
T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 324 TDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN--GHKRGI- 379
Query: 76 EGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
AC R R V S I G + H V +RF++K +V
Sbjct: 380 -------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 430
Query: 135 SGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVT 185
SG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T+
Sbjct: 431 SGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTIL 488
Query: 186 IWDML 190
IWD L
Sbjct: 489 IWDFL 493
Score = 53 (23.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ SGS+D T+ +WD+
Sbjct: 388 LVVSGSSDNTIRLWDI 403
Score = 50 (22.7 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
+ SG+ D + +WD++ L P + C
Sbjct: 429 IVSGAYDGKIKVWDLQAALDPRAPASTLC 457
Score = 45 (20.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ + S D+++ +WDM
Sbjct: 305 LMVTCSKDRSIAVWDM 320
Score = 43 (20.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 194 LASGSNDKTVTIWD 207
+ S S+D T+ IWD
Sbjct: 478 IISSSHDDTILIWD 491
Score = 41 (19.5 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 184 VTIWDMLATLLASGSNDKTVTIW 206
V + D + S S D+T+ +W
Sbjct: 339 VNVVDFDDKYIVSASGDRTIKVW 361
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 193 (73.0 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 68/211 (32%), Positives = 95/211 (45%)
Query: 28 SNMRCVRFSPDT-RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG----RIEGWGR-- 80
SN+ + T RLLATGGDD V VW + + +M GHT +I
Sbjct: 21 SNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLT--GHTTPIESLQISAKEELI 78
Query: 81 VPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDK 140
V RV+ +I+ T +G H + + S+ F+ S + SGS+D
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLG-----------HKANICSLDFHPYGSFVASGSLDT 127
Query: 141 TVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT-------- 192
+KLWDV CI +SHT+ V C FS D LAS ++D TV +WD+ A
Sbjct: 128 DIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG 187
Query: 193 ---------------LLASGSNDKTVTIWDM 208
LLASGS+D+T+ WD+
Sbjct: 188 HSGPVNVVEFHPSEYLLASGSSDRTIRFWDL 218
Score = 109 (43.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 117 HTSAVTSVRFNHKSS-LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL 175
H+S V+S+ + LL +G D V +W V C+ +L HT + S + L+
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 176 ASGSNDKTVTIWDM-----LATLLASGSN 199
+GS ++ +WD+ L TLL +N
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGHKAN 107
Score = 48 (22.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 192 TLLASGSNDKTVTIWDMR 209
+ +ASGS D + +WD+R
Sbjct: 118 SFVASGSLDTDIKLWDVR 135
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 164 (62.8 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW---RSDDLSLIMETNDRG-HTQGR 74
IL G H GS + C+++ D R++ TG D TV VW + L+ ++ N+ H R
Sbjct: 260 ILTG--HTGSVL-CLQY--DERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHL--R 312
Query: 75 IEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
G + C + R + + PT + + VG H +AV V F+ K +V
Sbjct: 313 FCN-GLMVTCS--KDRSIAVW-DMASPTDISLR---RVLVG-HRAAVNVVDFDDK--YIV 362
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S S D+T+K+W + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 363 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 415
Score = 144 (55.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ C++ LE H V C F D+
Sbjct: 383 TLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 438
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD+ A L
Sbjct: 439 KRIVSGAYDGKIKVWDLQAAL 459
Score = 131 (51.2 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
++SG D ++K+WD +L C+K L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 238 IISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDV 292
Score = 123 (48.4 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 51/185 (27%), Positives = 78/185 (42%)
Query: 16 TELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRI 75
T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 336 TDISLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN--GHKRGI- 391
Query: 76 EGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
AC R R V S I G + H V +RF++K +V
Sbjct: 392 -------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 442
Query: 135 SGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVT 185
SG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T+
Sbjct: 443 SGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTIL 500
Query: 186 IWDML 190
IWD L
Sbjct: 501 IWDFL 505
Score = 53 (23.7 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ SGS+D T+ +WD+
Sbjct: 400 LVVSGSSDNTIRLWDI 415
Score = 50 (22.7 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
+ SG+ D + +WD++ L P + C
Sbjct: 441 IVSGAYDGKIKVWDLQAALDPRAPASTLC 469
Score = 45 (20.9 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ + S D+++ +WDM
Sbjct: 317 LMVTCSKDRSIAVWDM 332
Score = 44 (20.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 194 LASGSNDKTVTIWDMRGNLSVD 215
+ S S+D T+ IWD N+S +
Sbjct: 490 IISSSHDDTILIWDFL-NVSTN 510
Score = 41 (19.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 184 VTIWDMLATLLASGSNDKTVTIW 206
V + D + S S D+T+ +W
Sbjct: 351 VNVVDFDDKYIVSASGDRTIKVW 373
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 167 (63.8 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 49/162 (30%), Positives = 83/162 (51%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEG--WGRVPACPLCRT 89
CV F P LA+G +D T+ +W +L I T +GH +G + G +G L +
Sbjct: 119 CVAFHPVFTSLASGSEDCTIKIW-DWELGEIERTL-KGHIRG-VSGLDYGGQKGNTLLAS 175
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRF-NHKSSLLVSGSVDKTVKLWDVP 148
+K P++ Y + T+ H +V+SVRF + L+S S D T+++WDV
Sbjct: 176 CSSDLTIKLWDPSKD--YA-NIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVS 232
Query: 149 SLTCIKTLESHTR-YVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+ C+K ++S T ++ + S D L SG D+ +T+W++
Sbjct: 233 TGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEV 274
Score = 122 (48.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 111 SETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSC 170
+ T+ H AVT V F+ + L SGS D T+K+WD +TL+ H R V+ +
Sbjct: 107 THTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGG 166
Query: 171 D--DSLLASGSNDKTVTIWD 188
++LLAS S+D T+ +WD
Sbjct: 167 QKGNTLLASCSSDLTIKLWD 186
Score = 112 (44.5 bits), Expect = 0.00061, P = 0.00061
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSL--LASGSNDKTVTIWDML 190
LVSG D+ + +W+V S L H ++ CC F+ S LA+ + K
Sbjct: 260 LVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLATLAGLKKPPPATSS 319
Query: 191 ATLLASGSNDKTVTIWDMRGNL 212
+A+G+ DKT+ +W+ RG L
Sbjct: 320 CEFVATGARDKTIKLWEARGRL 341
Score = 103 (41.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+ +G+ DKT+KLW+ IKTL H +V F L S S+DKT+ WD+
Sbjct: 323 VATGARDKTIKLWEARG-RLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDL 378
Score = 52 (23.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+R V S D + L +GG D+ +TVW
Sbjct: 248 IRDVSPSFDGKWLVSGGRDQAITVW 272
Score = 45 (20.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDV 216
L S S D T+ IWD+ V V
Sbjct: 217 LISASRDGTLRIWDVSTGFCVKV 239
Score = 44 (20.5 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 194 LASGSNDKTVTIWDM 208
L S S+DKT+ WD+
Sbjct: 364 LFSVSDDKTIRCWDL 378
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 167 (63.8 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 49/162 (30%), Positives = 83/162 (51%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEG--WGRVPACPLCRT 89
CV F P LA+G +D T+ +W +L I T +GH +G + G +G L +
Sbjct: 119 CVAFHPVFTSLASGSEDCTIKIW-DWELGEIERTL-KGHIRG-VSGLDYGGQKGNTLLAS 175
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRF-NHKSSLLVSGSVDKTVKLWDVP 148
+K P++ Y + T+ H +V+SVRF + L+S S D T+++WDV
Sbjct: 176 CSSDLTIKLWDPSKD--YA-NIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVS 232
Query: 149 SLTCIKTLESHTR-YVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+ C+K ++S T ++ + S D L SG D+ +T+W++
Sbjct: 233 TGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEV 274
Score = 122 (48.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 111 SETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSC 170
+ T+ H AVT V F+ + L SGS D T+K+WD +TL+ H R V+ +
Sbjct: 107 THTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGG 166
Query: 171 D--DSLLASGSNDKTVTIWD 188
++LLAS S+D T+ +WD
Sbjct: 167 QKGNTLLASCSSDLTIKLWD 186
Score = 112 (44.5 bits), Expect = 0.00061, P = 0.00061
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSL--LASGSNDKTVTIWDML 190
LVSG D+ + +W+V S L H ++ CC F+ S LA+ + K
Sbjct: 260 LVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLATLAGLKKPPPATSS 319
Query: 191 ATLLASGSNDKTVTIWDMRGNL 212
+A+G+ DKT+ +W+ RG L
Sbjct: 320 CEFVATGARDKTIKLWEARGRL 341
Score = 103 (41.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+ +G+ DKT+KLW+ IKTL H +V F L S S+DKT+ WD+
Sbjct: 323 VATGARDKTIKLWEARG-RLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDL 378
Score = 52 (23.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+R V S D + L +GG D+ +TVW
Sbjct: 248 IRDVSPSFDGKWLVSGGRDQAITVW 272
Score = 45 (20.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDV 216
L S S D T+ IWD+ V V
Sbjct: 217 LISASRDGTLRIWDVSTGFCVKV 239
Score = 44 (20.5 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 194 LASGSNDKTVTIWDM 208
L S S+DKT+ WD+
Sbjct: 364 LFSVSDDKTIRCWDL 378
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 156 (60.0 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 35/93 (37%), Positives = 50/93 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V ++ F+ L S D+ +KLWD+ S T K L HT +T TFS D SL+A
Sbjct: 467 HRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIA 526
Query: 177 SGSNDKTVTIWDMLATLL---ASGSNDKTVTIW 206
S S D +V +WD+ T A GS+ + V ++
Sbjct: 527 SASMDNSVRVWDIRNTYCNAPADGSSSELVGVY 559
Score = 119 (46.9 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V V+F+ S+ L +GS DKTV+LW ++ H V FS + LA
Sbjct: 425 HLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLA 484
Query: 177 SGSNDKTVTIWDMLATLL 194
S D+ + +WD+ + L
Sbjct: 485 SAGEDQRLKLWDLASGTL 502
Score = 96 (38.9 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V + + S S S D+T +LW ++ H V C F + + LA
Sbjct: 383 HAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLA 442
Query: 177 SGSNDKTVTIW 187
+GS DKTV +W
Sbjct: 443 TGSTDKTVRLW 453
Score = 95 (38.5 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 25/80 (31%), Positives = 37/80 (46%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G + + + H V S RF SS L+S S D +++ WD+ S T + H V
Sbjct: 332 GTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLD 391
Query: 168 FSCDDSLLASGSNDKTVTIW 187
S AS S+D+T +W
Sbjct: 392 ISPCSLYFASASHDRTARLW 411
Score = 77 (32.2 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDD-LSLIMETNDRG 69
CV+F P++ LATG D+TV +W + S+ + T RG
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRG 469
Score = 55 (24.4 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 191 ATLLASGSNDKTVTIWDMRGNLSVDVP 217
++L+AS S D +V +WD+R N + P
Sbjct: 522 SSLIASASMDNSVRVWDIR-NTYCNAP 547
Score = 55 (24.4 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 194 LASGSNDKTVTIWD-MRGN 211
LA+GS DKTV +W +GN
Sbjct: 441 LATGSTDKTVRLWSTQQGN 459
Score = 52 (23.4 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+ SP+++LLA G D+ V +W
Sbjct: 271 LNTAEISPNSKLLAAGFDNSCVKLW 295
Score = 39 (18.8 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 194 LASGSNDKTVTIWDM 208
LAS D+ + +WD+
Sbjct: 483 LASAGEDQRLKLWDL 497
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 155 (59.6 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V S+ F+ L S D+ +KLWD+ S T K L HT +T FS D L+A
Sbjct: 467 HRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIA 526
Query: 177 SGSNDKTVTIWDMLATLL---ASGSNDKTVTIW--DMRGNLSV 214
S S D +V +WD+ +T A GS+ + V ++ M LSV
Sbjct: 527 SASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSV 569
Score = 122 (48.0 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + V V+F+ S+ L +GS DKTV+LW ++ H V +FS + LA
Sbjct: 425 HLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLA 484
Query: 177 SGSNDKTVTIWDMLATLL 194
S D+ + +WD+ + L
Sbjct: 485 SAGEDQRLKLWDLASGTL 502
Score = 106 (42.4 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 24/71 (33%), Positives = 33/71 (46%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V V + S SGS D+T +LW ++ H V C F + + LA
Sbjct: 383 HAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLA 442
Query: 177 SGSNDKTVTIW 187
+GS DKTV +W
Sbjct: 443 TGSTDKTVRLW 453
Score = 100 (40.3 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G + + + H V S RF SS L+S S D +++ WD+ S T + H V
Sbjct: 332 GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVD 391
Query: 168 FSCDDSLLASGSNDKTVTIW 187
S ASGS+D+T +W
Sbjct: 392 ISPFSLYFASGSHDRTARLW 411
Score = 79 (32.9 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDD-LSLIMETNDRG 69
H+ +++ CV+F P++ LATG D+TV +W + S+ + T RG
Sbjct: 425 HL-ADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRG 469
Score = 55 (24.4 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 194 LASGSNDKTVTIWD-MRGN 211
LA+GS DKTV +W +GN
Sbjct: 441 LATGSTDKTVRLWSAQQGN 459
Score = 48 (22.0 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+ S D++LLA G D+ + +W
Sbjct: 271 LNTAEISSDSKLLAAGFDNSCIKLW 295
Score = 43 (20.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSD 57
V SP + A+G D T +W D
Sbjct: 390 VDISPFSLYFASGSHDRTARLWSFD 414
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 169 (64.5 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 50/162 (30%), Positives = 73/162 (45%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
CV FSP LLA+G D+TV +W + T R HT V + C
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIWVPNVKG--ESTVFRAHT-------ATVRSVHFCSDG- 115
Query: 92 FSTFVKQIIPTRVGVYGQDSE----TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV 147
+FV V V+ + ++ +H + V +F+ L+VS S DKTVKLWD
Sbjct: 116 -QSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 148 PSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S C+ + H +VT F + +A+ D TV +WD+
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Score = 161 (61.7 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 51/157 (32%), Positives = 71/157 (45%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V FS +T+ LA+G D + VW + GH + P+ L +
Sbjct: 25 VDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRF--AGHKDA-VTCVNFSPSGHLLASGSR 81
Query: 93 STFVKQIIPTRVGVYGQDSETVGR-HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
V+ +P V G+ TV R HT+ V SV F V+ S DKTVK+W
Sbjct: 82 DKTVRIWVPN---VKGES--TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQK 136
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ +L H +V C FS D L+ S S+DKTV +WD
Sbjct: 137 FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 148 (57.2 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 46/165 (27%), Positives = 72/165 (43%)
Query: 23 SVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVP 82
S HI +RC +FSPD RL+ + DD+TV +W + + G G + P
Sbjct: 142 SQHINW-VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG---GFVTYVDFHP 197
Query: 83 ACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTV 142
+ VK + R Q + H++AV ++ F+ + LV+ S D T+
Sbjct: 198 SGTCIAAAGMDNTVK-VWDVRTHRLLQHYQL---HSAAVNALSFHPSGNYLVTASSDSTL 253
Query: 143 KLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
K+ D+ + TL H T FS ASG +D+ V +W
Sbjct: 254 KILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 143 (55.4 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 32/71 (45%), Positives = 38/71 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H AVTSV F+ + L SGS+D + +W + T H VTC FS LLA
Sbjct: 18 HRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLA 77
Query: 177 SGSNDKTVTIW 187
SGS DKTV IW
Sbjct: 78 SGSRDKTVRIW 88
Score = 102 (41.0 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H VT V F+ + + + +D TVK+WDV + ++ + H+ V +F + L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 245
Query: 177 SGSNDKTVTIWDML 190
+ S+D T+ I D++
Sbjct: 246 TASSDSTLKILDLM 259
Score = 58 (25.5 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVW 54
+ +R V F D + T DD+TV VW
Sbjct: 104 ATVRSVHFCSDGQSFVTASDDKTVKVW 130
Score = 54 (24.1 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 193 LLASGSNDKTVTIWDMRGNLSVDVPLNYC 221
L+ S S+DKTV +WD V +YC
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVH---SYC 184
Score = 49 (22.3 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 192 TLLASGSNDKTVTIWDMR 209
T +A+ D TV +WD+R
Sbjct: 200 TCIAAAGMDNTVKVWDVR 217
Score = 39 (18.8 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 183 TVTIWDMLATLLASGSNDKTVTIW 206
T + ASG +D+ V +W
Sbjct: 275 TTVAFSRTGEYFASGGSDEQVMVW 298
Score = 39 (18.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 196 SGSNDKTVTIW 206
+ S+DKTV +W
Sbjct: 120 TASDDKTVKVW 130
>TAIR|locus:2153443 [details] [associations]
symbol:AT5G54200 "AT5G54200" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AB013387 HOGENOM:HOG000239143 IPI:IPI00537060
RefSeq:NP_200231.1 UniGene:At.27971 ProteinModelPortal:Q9FK21
SMR:Q9FK21 PRIDE:Q9FK21 EnsemblPlants:AT5G54200.1 GeneID:835508
KEGG:ath:AT5G54200 TAIR:At5g54200 InParanoid:Q9FK21 OMA:KERRSTD
PhylomeDB:Q9FK21 ProtClustDB:CLSN2916439 Genevestigator:Q9FK21
Uniprot:Q9FK21
Length = 825
Score = 179 (68.1 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 65/197 (32%), Positives = 95/197 (48%)
Query: 11 SLFNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW------RSDDLSLIME 64
+LF E+ H GS + ++FS D R LA+ G+D + +W R +L L M+
Sbjct: 352 ALFKSQEI----QAHKGS-IWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGEL-LSMD 405
Query: 65 TNDRGHTQGRIEGWGR---VPACPLCRTRV-FS----TFVKQIIPTRVGVYGQDSETVGR 116
+ G + G V P R R FS + ++P V+G + V
Sbjct: 406 KQEDGSINLFLLANGSPEPVSMSPKRRGRTSFSRKSVSLDNVLVPE--AVFGLSEKPVCS 463
Query: 117 ---HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFS-CDD 172
H V + ++ KS L+S S+DKTV+LWD+ S TC+K SH+ YVTC F+ DD
Sbjct: 464 FVGHLDDVLDLSWS-KSQHLLSSSMDKTVRLWDLSSKTCLKVF-SHSDYVTCIQFNPVDD 521
Query: 173 SLLASGSNDKTVTIWDM 189
+ SGS D V IW +
Sbjct: 522 NYFISGSLDAKVRIWSI 538
Score = 38 (18.4 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 196 SGSNDKTVTIWDMRGNLSVD 215
SGS D V IW + + VD
Sbjct: 526 SGSLDAKVRIWSIPDHQVVD 545
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 148 (57.2 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 43/158 (27%), Positives = 72/158 (45%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+RC +FSPD RL+ + +D+T+ +W + + + +D + G P+ C
Sbjct: 105 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD---SVGFANFVDFNPS-GTCIA 160
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
S ++ RV Q + H+ V + F+ + L++ S D T+K+ D+
Sbjct: 161 SAGSDQTVKVWDVRVNKLLQHYQV---HSGGVNCISFHPSGNYLITASSDGTLKILDLLE 217
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
I TL+ HT V +FS L ASG D V +W
Sbjct: 218 GRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 255
Score = 146 (56.5 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
HT+ V SV F+ L + S DK++K+W + + +L HT +V C FS D L+
Sbjct: 59 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 118
Query: 177 SGSNDKTVTIWD 188
S S DKT+ IWD
Sbjct: 119 SCSEDKTIKIWD 130
Score = 136 (52.9 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 114 VGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDS 173
VG H VTSV+F+ +LL S S D+TV+LW ++HT V FS D
Sbjct: 15 VG-HKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ 73
Query: 174 LLASGSNDKTVTIWDM 189
LA+ S DK++ +W M
Sbjct: 74 FLATASEDKSIKVWSM 89
Score = 132 (51.5 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 116 RHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL 175
RHT V +F+ L+VS S DKT+K+WD + C+ + F+ + +
Sbjct: 100 RHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCI 159
Query: 176 ASGSNDKTVTIWDM 189
AS +D+TV +WD+
Sbjct: 160 ASAGSDQTVKVWDV 173
Score = 59 (25.8 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 192 TLLASGSNDKTVTIWDMRGN 211
T +AS +D+TV +WD+R N
Sbjct: 157 TCIASAGSDQTVKVWDVRVN 176
Score = 59 (25.8 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHT 71
V+FSP LLA+ D TV +W D E + HT
Sbjct: 24 VQFSPHGNLLASASRDRTVRLWIPDKRGKFSEF--KAHT 60
Score = 50 (22.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 193 LLASGSNDKTVTIWD 207
L+ S S DKT+ IWD
Sbjct: 116 LIVSCSEDKTIKIWD 130
Score = 36 (17.7 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 193 LLASGSNDKTVTIW 206
L ASG D V +W
Sbjct: 242 LFASGGADTQVLLW 255
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 188 (71.2 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 68/214 (31%), Positives = 97/214 (45%)
Query: 23 SVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIME-TNDRGHT-----QGRIE 76
SV GS + C F P L TG +TVW L E +D G T +
Sbjct: 136 SVKDGSLVACAFFPPGN-LFVTGSSCGDLTVWDDKMRCLHSEKAHDLGITCCDFSSQPVP 194
Query: 77 GWGR------VPACPL-CRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHK 129
G R + +C C+ +++ I+ G + T+ H + V + F+H
Sbjct: 195 GGERGLQFFQLASCGQDCQIKIWVISFIHIL----GFELKYKSTLTGHCAPVLACAFSHD 250
Query: 130 SSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+LVSGSVDK+V ++D + + TL HTRYVT C F+ + LLA+GS DKTV IW
Sbjct: 251 GQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNILLLATGSMDKTVNIWQF 310
Query: 190 -LATLLASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
TL + D+ + N S D N+ C
Sbjct: 311 DTETLCQAKIPDQPKQFTE---NWSEDDVSNWLC 341
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCI--KTLESHTRYVTCCTFSC 170
T+ H V F+ SSLL + ++DKT++L+ + T + L+ HT V CC FS
Sbjct: 7 TLADHNDDVNCCAFS--SSLLATCALDKTIRLYFLSDFTEVPYSPLKFHTYAVHCCCFSP 64
Query: 171 DDSLLASGSNDKTVTIWD 188
+LAS S D T +WD
Sbjct: 65 SGHILASCSTDGTTVLWD 82
Score = 100 (40.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 119 SAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASG 178
S V RF+ S+ LVSG+ D TV LW+ S + + C F +L +G
Sbjct: 98 SPVRVCRFSPDSTCLVSGASDGTVVLWNAQSYKLHRCASVKDGSLVACAFFPPGNLFVTG 157
Query: 179 SNDKTVTIWD-MLATLLASGSNDKTVTIWD 207
S+ +T+WD + L + ++D +T D
Sbjct: 158 SSCGDLTVWDDKMRCLHSEKAHDLGITCCD 187
Score = 51 (23.0 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW--RSDDLSLIME 64
+ C FSP +LA+ D T +W ++ + +ME
Sbjct: 57 VHCCCFSPSGHILASCSTDGTTVLWDTQNGQILAVME 93
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 164 (62.8 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 35/107 (32%), Positives = 58/107 (54%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + +V+F+H+ +VS S D+T+++W+ S TC+ L H YV C +F + L+
Sbjct: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVV 151
Query: 177 SGSNDKTVTIWDMLATLLASGSN-DKTVTIWDMRGNL--SVDVPLNY 220
S S D+TV +WD+ A + S D + + M +L VD + Y
Sbjct: 152 SASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFGGVDAIVKY 198
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 31/115 (26%), Positives = 52/115 (45%)
Query: 74 RIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL 133
R++G P P + S + Q+ R+G + H V V F++ L
Sbjct: 11 RVKGLSFHPKRPWILASLHSGVI-QLWDYRMGTL---IDRFDEHEGPVRGVHFHNSQPLF 66
Query: 134 VSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
VSG D +K+W+ + C+ TL H Y+ F + + S S+D+T+ IW+
Sbjct: 67 VSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
Score = 57 (25.1 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 15 GTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
GT LI R H G +R V F L +GGDD + VW
Sbjct: 41 GT-LIDRFDEHEGP-VRGVHFHNSQPLFVSGGDDYKIKVW 78
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 186 (70.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 58/174 (33%), Positives = 88/174 (50%)
Query: 17 ELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE 76
+ +LRG H+ + VRFSPD ++A+GG D V VW + LI +G +
Sbjct: 169 KFLLRG--HL-RGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTF------EGHLA 219
Query: 77 GWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSET--VGRHTSAVTSVRFNHKSSLLV 134
G + P T + K I V + G+ T +G H + V ++ F+ K ++LV
Sbjct: 220 GISTISWSPDGATIASGSDDKTIRLWNV-LTGKAHPTPFIGHH-NYVYAIAFSPKGNMLV 277
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
SGS D+ V LWDV S +K+L +H+ V+ D +L+AS + D V IWD
Sbjct: 278 SGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWD 331
Score = 144 (55.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V++VRF+ +S++ SG D VK+W + I T E H ++ ++S D + +A
Sbjct: 175 HLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIA 234
Query: 177 SGSNDKTVTIWDML 190
SGS+DKT+ +W++L
Sbjct: 235 SGSDDKTIRLWNVL 248
Score = 53 (23.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 186 IWDMLATLLASGSNDKTVTIWD 207
+WD TL+AS + D V IWD
Sbjct: 312 VWD--GTLIASCATDGLVRIWD 331
Score = 52 (23.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 193 LLASGSNDKTVTIWDMR 209
+L SGS D+ V +WD+R
Sbjct: 275 MLVSGSYDEAVFLWDVR 291
>RGD|1311400 [details] [associations]
symbol:Atg16l2 "autophagy related 16-like 2 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1311400 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 CTD:89849 OrthoDB:EOG44F68R
IPI:IPI00196362 RefSeq:NP_001178489.1 UniGene:Rn.104199
ProteinModelPortal:D4A9M7 Ensembl:ENSRNOT00000026286 GeneID:308865
KEGG:rno:308865 UCSC:RGD:1311400 NextBio:659687 Uniprot:D4A9M7
Length = 623
Score = 162 (62.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 49/164 (29%), Positives = 77/164 (46%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC 84
H+ S + V F+P++ LLATGG D + +W + +E N +G V
Sbjct: 339 HL-SEVNAVCFAPNSSLLATGGADRLIHLWNV--VGGRLEANQT--LEGAGGSITSVDFD 393
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKL 144
P + +T+ + +VG Q ET+ H VT+ +F V+GS D+TVK
Sbjct: 394 PSGSQVLAATYNQAAQLWKVGET-QSKETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKE 452
Query: 145 WDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
WD+ C +T+ + Y C C D ++ SG ND+ + WD
Sbjct: 453 WDLGRAYCSRTINVLS-Y--CNDVVCGDHIIISGHNDQKIRFWD 493
Score = 102 (41.0 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 104 VGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
VG + ++T+ ++TSV F+ S +++ + ++ +LW V +TL H V
Sbjct: 370 VGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQSKETLSGHKDKV 429
Query: 164 TCCTFSCDDSLLASGSNDKTVTIWDM 189
T F +GS D+TV WD+
Sbjct: 430 TAAKFKLTRHQAVTGSRDRTVKEWDL 455
Score = 54 (24.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 193 LLASGSNDKTVTIWDMRGNLSVDV 216
++ SG ND+ + WD RG + V
Sbjct: 479 IIISGHNDQKIRFWDSRGPHCIQV 502
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 187 (70.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 58/171 (33%), Positives = 81/171 (47%)
Query: 28 SNMRCVRFSPDT-RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG----RIEGWGR-- 80
SN+ + T RLLATGGDD V VW + + +M GHT +I
Sbjct: 21 SNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLT--GHTTPIESLQISAKEELI 78
Query: 81 VPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDK 140
V RV+ +I+ T +G H + + S+ F+ S + SGS+D
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLG-----------HKANICSLDFHPYGSFVASGSLDT 127
Query: 141 TVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLA 191
+KLWDV CI +SHT+ V C FS D LAS ++D TV +WD+ A
Sbjct: 128 DIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Score = 109 (43.4 bits), Expect = 0.00028, Sum P(2) = 0.00027
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 117 HTSAVTSVRFNHKSS-LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL 175
H+S V+S+ + LL +G D V +W V C+ +L HT + S + L+
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 176 ASGSNDKTVTIWDM-----LATLLASGSN 199
+GS ++ +WD+ L TLL +N
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGHKAN 107
Score = 48 (22.0 bits), Expect = 0.00028, Sum P(2) = 0.00027
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 194 LASGSNDKTVTIWDM 208
LAS ++D TV +WD+
Sbjct: 162 LASAADDHTVKLWDL 176
Score = 48 (22.0 bits), Expect = 0.00028, Sum P(2) = 0.00027
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 192 TLLASGSNDKTVTIWDMR 209
+ +ASGS D + +WD+R
Sbjct: 118 SFVASGSLDTDIKLWDVR 135
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 182 (69.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 59/177 (33%), Positives = 84/177 (47%)
Query: 42 LATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQIIP 101
+ATG D+T +W S + T RGHT I P L T T K +
Sbjct: 150 VATGSFDKTCKLW-SAETGKCFYTF-RGHT-AEIVCLAFNPQSTLVATGSMDTTAK-LWD 205
Query: 102 TRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTR 161
G ++ T+ H + + S+ FN LV+GS D T LWDVPS + L H
Sbjct: 206 VESG---EEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRG 262
Query: 162 YVTCCTFSCDDSLLASGSNDKTVTIWDM-----LATLLASGSNDKTVTI-WDMRGNL 212
++C F+ D SL+A+ S DK+ +WD LATLL G ND+ + + ++ G L
Sbjct: 263 EISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLL--GHNDEVLDVCFNYTGQL 317
Score = 159 (61.0 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 55/192 (28%), Positives = 91/192 (47%)
Query: 2 HEFPMGDGPSLFNGTEL-ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDD-- 58
H + D PS G ++ +L G H G + CV+F+ D L+AT D++ VW ++
Sbjct: 241 HTAILWDVPS---GRKVHVLSG--HRGE-ISCVQFNWDCSLIATASLDKSCKVWDAEGGQ 294
Query: 59 -LSLIMETNDRGHTQGRIEGWGRVPACPLC--RTRVFSTFVKQIIPTRVGVYGQDSETVG 115
L+ ++ ND G++ A +RVFST Q + G
Sbjct: 295 CLATLLGHNDEV-LDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEG---------- 343
Query: 116 RHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL 175
H ++ V FN + S +++ SVDKT ++W V + C++ LE H+ + C F+ + +
Sbjct: 344 -HKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTI 402
Query: 176 ASGSNDKTVTIW 187
+GS D T IW
Sbjct: 403 ITGSKDNTCRIW 414
Score = 150 (57.9 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 108 GQDSETVGRHTSAVTSVRFNHK-SSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCC 166
G++ T+ H + V ++ FN+ + +GS DKT KLW + C T HT + C
Sbjct: 124 GEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCL 183
Query: 167 TFSCDDSLLASGSNDKTVTIWDM 189
F+ +L+A+GS D T +WD+
Sbjct: 184 AFNPQSTLVATGSMDTTAKLWDV 206
Score = 137 (53.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 42/157 (26%), Positives = 68/157 (43%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETND-RGHTQGRIEGWGRVPACPLCRTR 90
C+ F+P + L+ATG D T +W D+ E + GH I L
Sbjct: 182 CLAFNPQSTLVATGSMDTTAKLW---DVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGS 238
Query: 91 VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSL 150
T + +P+ G+ + H ++ V+FN SL+ + S+DK+ K+WD
Sbjct: 239 FDHTAILWDVPS-----GRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGG 293
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
C+ TL H V F+ L+A+ S D T ++
Sbjct: 294 QCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVF 330
Score = 124 (48.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD-DSLL 175
H +T+V FN S ++GS D+T K+WD S + TLE H V F+ +
Sbjct: 91 HILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKV 150
Query: 176 ASGSNDKTVTIW 187
A+GS DKT +W
Sbjct: 151 ATGSFDKTCKLW 162
Score = 54 (24.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 191 ATLLASGSNDKTVTIWDMRGNLSV 214
+TL+A+GS D T +WD+ V
Sbjct: 189 STLVATGSMDTTAKLWDVESGEEV 212
Score = 44 (20.5 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDV 216
L +GS D T +WD+ V V
Sbjct: 234 LVTGSFDHTAILWDVPSGRKVHV 256
Score = 36 (17.7 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 194 LASGSNDKTVTIW 206
+ +GS D T IW
Sbjct: 402 IITGSKDNTCRIW 414
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 162 (62.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 58/197 (29%), Positives = 91/197 (46%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGH------TQ 72
IL G H G + V FSPD L + +D T+ +W + ++ +GH TQ
Sbjct: 494 ILHG--HSGP-VYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLV--GYKGHNYPVWDTQ 548
Query: 73 GRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSL 132
G+ V R+++T Q P R+ G H + VT RF+ S+
Sbjct: 549 FSPFGYYFVSGGHDRVARLWATDHYQ--PLRI--------FAG-HLADVTCTRFHPNSNY 597
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT 192
+ +GS D+TV+LWDV + C++ H + FS + LASGS D V +WD+
Sbjct: 598 VATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHG 657
Query: 193 LLASGSNDKTVTIWDMR 209
L+ + T TI+ ++
Sbjct: 658 LMIAELKGHTGTIYALK 674
Score = 137 (53.3 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + S+ F+ L SGS D V LWD+ I L+ HT + FS D ++A
Sbjct: 624 HKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIA 683
Query: 177 SGSNDKTVTIWDMLATL 193
SGS D TV +WD++ +
Sbjct: 684 SGSIDNTVRLWDVMRAI 700
Score = 103 (41.3 bits), Expect = 9.6e-06, Sum P(3) = 9.6e-06
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 110 DSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFS 169
+S+ + H+ V V F+ + L+S S D T++LW + + TC+ + H V FS
Sbjct: 491 ESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFS 550
Query: 170 CDDSLLASGSNDKTVTIW 187
SG +D+ +W
Sbjct: 551 PFGYYFVSGGHDRVARLW 568
Score = 53 (23.7 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
++ASGS D TV +WD+
Sbjct: 681 IIASGSIDNTVRLWDV 696
Score = 53 (23.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+ V F+ D+ L+A G D TV VW
Sbjct: 429 LTAVDFTDDSSLIAGGFADSTVRVW 453
Score = 50 (22.7 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 194 LASGSNDKTVTIWDMRGNLSV 214
LASGS D V +WD+ L +
Sbjct: 640 LASGSTDGRVLLWDIGHGLMI 660
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 159 (61.0 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 49/189 (25%), Positives = 82/189 (43%)
Query: 10 PSLFNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETND-- 67
P+L ++ L S+ S + CV+FS D LATG + +T V+R D SL+ +D
Sbjct: 327 PALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCN-KTTQVYRVSDGSLVARLSDDS 385
Query: 68 --RGHTQGRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSA----- 120
H E T +T + T +D E + +S
Sbjct: 386 AANNHRNSITENNTTTSTDNNTMTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDLY 445
Query: 121 VTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSN 180
+ SV F+ L +G+ D+ +++WD+ + + L+ H + + + L SGS
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 505
Query: 181 DKTVTIWDM 189
D+TV IWD+
Sbjct: 506 DRTVRIWDL 514
Score = 136 (52.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 56/207 (27%), Positives = 94/207 (45%)
Query: 18 LILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW--RSDDLSLIMETNDRGHTQGRI 75
+IL+G H ++ + + P L +G D TV +W R+ SL + D T
Sbjct: 479 MILQG--H-EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVS 535
Query: 76 EGWGR-VPACPLCRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL 133
G G+ + A L R RV+ + ++ R+ ++E+ H +V SV F +
Sbjct: 536 PGDGKYIAAGSLDRAVRVWDSETGFLVE-RLD---SENESGTGHKDSVYSVVFTRDGQSV 591
Query: 134 VSGSVDKTVKLWDV-----------P-SLTCIKTLESHTRYVTCCTFSCDDSLLASGSND 181
VSGS+D++VKLW++ P S TC T H +V + +D + SGS D
Sbjct: 592 VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD 651
Query: 182 KTVTIWDMLA---TLLASGSNDKTVTI 205
+ V WD + L+ G + +++
Sbjct: 652 RGVLFWDKKSGNPLLMLQGHRNSVISV 678
Score = 64 (27.6 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 194 LASGSNDKTVTIWDMR-GNLSVDVPL 218
L SGS D+TV IWD+R G S+ + +
Sbjct: 500 LVSGSGDRTVRIWDLRTGQCSLTLSI 525
Score = 46 (21.3 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 194 LASGSNDKTVTIWDMRGNLSVD 215
+A+GS D+ V +WD V+
Sbjct: 542 IAAGSLDRAVRVWDSETGFLVE 563
>MGI|MGI:1920933 [details] [associations]
symbol:Atg16l2 "autophagy related 16-like 2 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920933 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031
eggNOG:COG2319 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000112569 HOVERGEN:HBG050534
InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914 CTD:89849
OrthoDB:EOG44F68R EMBL:AK131109 EMBL:AC107638 EMBL:BC060054
IPI:IPI00755633 IPI:IPI00895049 RefSeq:NP_001104581.1
UniGene:Mm.275744 ProteinModelPortal:Q6KAU8 SMR:Q6KAU8
PhosphoSite:Q6KAU8 PRIDE:Q6KAU8 Ensembl:ENSMUST00000120267
Ensembl:ENSMUST00000139609 Ensembl:ENSMUST00000143630 GeneID:73683
KEGG:mmu:73683 UCSC:uc009iof.2 InParanoid:Q6KAU8 OMA:QGPHCTA
NextBio:338795 Bgee:Q6KAU8 Genevestigator:Q6KAU8 Uniprot:Q6KAU8
Length = 623
Score = 161 (61.7 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 49/164 (29%), Positives = 76/164 (46%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC 84
H+ S + V F P++ LLATGG D + +W + +E N +G V
Sbjct: 339 HL-SEVNAVCFGPNSSLLATGGADRLIHLWNV--VGGRLEANQT--LEGAGGSITSVDFD 393
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKL 144
P + +T+ + +VG Q ET+ H VT+ +F V+GS D+TVK
Sbjct: 394 PSGSQVLAATYNQAAQLWKVGET-QSKETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKE 452
Query: 145 WDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
WD+ C +T+ + Y C C D ++ SG ND+ + WD
Sbjct: 453 WDLGRAYCSRTINVLS-Y--CNDVVCGDHIIISGHNDQKIRFWD 493
Score = 102 (41.0 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 104 VGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
VG + ++T+ ++TSV F+ S +++ + ++ +LW V +TL H V
Sbjct: 370 VGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQSKETLSGHKDKV 429
Query: 164 TCCTFSCDDSLLASGSNDKTVTIWDM 189
T F +GS D+TV WD+
Sbjct: 430 TAAKFKLTRHQAVTGSRDRTVKEWDL 455
Score = 100 (40.3 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 32/111 (28%), Positives = 49/111 (44%)
Query: 98 QIIPTRVG--VYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS--LTCI 153
Q IP V + Q + + H S V +V F SSLL +G D+ + LW+V L
Sbjct: 318 QSIPVCVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLATGGADRLIHLWNVVGGRLEAN 377
Query: 154 KTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATL---LASGSNDK 201
+TLE +T F S + + + ++ +W + T SG DK
Sbjct: 378 QTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQSKETLSGHKDK 428
Score = 54 (24.1 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 193 LLASGSNDKTVTIWDMRGNLSVDV 216
++ SG ND+ + WD RG + V
Sbjct: 479 IIISGHNDQKIRFWDSRGPHCIQV 502
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 139 (54.0 bits), Expect = 7.5e-13, Sum P(3) = 7.5e-13
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + S+ F+H +VSGS D+T +LWDV + CI LE VT S +D +A
Sbjct: 401 HEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTAIAISPNDQFIA 459
Query: 177 SGSNDKTVTIWDMLATLL 194
GS D+ + +W + TL+
Sbjct: 460 VGSLDQIIRVWSVSGTLV 477
Score = 138 (53.6 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 119 SAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASG 178
+ VT++ + + GS+D+ +++W V S T ++ LE H V FS D S+L SG
Sbjct: 444 NGVTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSSILLSG 502
Query: 179 SNDKTVTIWDMLAT 192
S DKT+ +W++ AT
Sbjct: 503 SLDKTIKVWELQAT 516
Score = 135 (52.6 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 53/170 (31%), Positives = 80/170 (47%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFST 94
FS + R + +G D T +W D +ET G ++E V A + F
Sbjct: 410 FSHNGRFIVSGSGDRTARLW--D-----VET---GQCILKLEIENGVTAIAISPNDQFIA 459
Query: 95 F--VKQIIPTRV-GVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS-- 149
+ QII RV V G E + H +V S+ F+ SS+L+SGS+DKT+K+W++ +
Sbjct: 460 VGSLDQII--RVWSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATR 517
Query: 150 ---LTCIK-------TLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
L+ IK T HT +V S D SGS D+++ WD+
Sbjct: 518 SVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDL 567
Score = 121 (47.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 43/174 (24%), Positives = 75/174 (43%)
Query: 24 VHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPA 83
+ I + + + SP+ + +A G D+ + VW ++E + GH + + P
Sbjct: 440 LEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVS--GTLVERLE-GHKES-VYSIAFSPD 495
Query: 84 CPLCRTRVFSTFVK--QIIPTR-VGVYGQDSETVGR-----HTSAVTSVRFNHKSSLLVS 135
+ + +K ++ TR VG+ E + + HT V SV + S +S
Sbjct: 496 SSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLS 555
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
GS D++++ WD+ + T + H V FS D ASGS D IW +
Sbjct: 556 GSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609
Score = 108 (43.1 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 121 VTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSN 180
V ++ F+ LV+G+ D+ +KLWD+ + H + + FS + + SGS
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 181 DKTVTIWDM 189
D+T +WD+
Sbjct: 423 DRTARLWDV 431
Score = 64 (27.6 bits), Expect = 7.5e-13, Sum P(3) = 7.5e-13
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLS 60
+R + FSPD + L TG +D + +W DLS
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLW---DLS 390
Score = 61 (26.5 bits), Expect = 7.5e-13, Sum P(3) = 7.5e-13
Identities = 10/24 (41%), Positives = 18/24 (75%)
Query: 191 ATLLASGSNDKTVTIWDMRGNLSV 214
+++L SGS DKT+ +W+++ SV
Sbjct: 496 SSILLSGSLDKTIKVWELQATRSV 519
Score = 43 (20.2 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 194 LASGSNDKTVTIWDMRGNL 212
+A GS D+ + +W + G L
Sbjct: 458 IAVGSLDQIIRVWSVSGTL 476
Score = 42 (19.8 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 32 CVRFSPDTRLLATG 45
CV+FS + + LATG
Sbjct: 318 CVKFSNNGKYLATG 331
Score = 36 (17.7 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 195 ASGSNDKTVTIWDM 208
ASGS D IW +
Sbjct: 596 ASGSGDLRARIWSI 609
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 151 (58.2 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V + F+ LVS D+ +KLWD+ S T K L HT +T TFS D S++A
Sbjct: 464 HCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIA 523
Query: 177 SGSNDKTVTIWDMLA---TLLASGSNDKTVTIW 206
S S D +V IWD+ + + A GS+ + + ++
Sbjct: 524 SASMDNSVRIWDIKSKHNSTPADGSSSELLGVY 556
Score = 130 (50.8 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 29/100 (29%), Positives = 46/100 (46%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + V V+F+ S+ L +GS DKTV+LW ++ H V C FS + L
Sbjct: 422 HLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLV 481
Query: 177 SGSNDKTVTIWDMLATLLASGSNDKTVTIWDMRGNLSVDV 216
S D+ + +WD+ + L + T I + +L V
Sbjct: 482 SAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSV 521
Score = 99 (39.9 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 22/71 (30%), Positives = 31/71 (43%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V + + S S S D T +LW ++ H V C F + + LA
Sbjct: 380 HAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLA 439
Query: 177 SGSNDKTVTIW 187
+GS DKTV +W
Sbjct: 440 TGSTDKTVRLW 450
Score = 92 (37.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 24/71 (33%), Positives = 31/71 (43%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V S RF SS L+S S D +++ WD+ S T + H V S A
Sbjct: 338 HCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFA 397
Query: 177 SGSNDKTVTIW 187
S S D T +W
Sbjct: 398 SASYDHTARLW 408
Score = 74 (31.1 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
H+ + + CV+F P++ LATG D+TV +W
Sbjct: 422 HL-AGVDCVKFHPNSNYLATGSTDKTVRLW 450
Score = 59 (25.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYC 221
LA+GS DKTV +W + SV + +C
Sbjct: 438 LATGSTDKTVRLWSAQQGNSVRLFTGHC 465
Score = 55 (24.4 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 36 SPDTRLLATGGDDETVTVW 54
SPD +LLATG ++ ++ +W
Sbjct: 277 SPDNKLLATGLNNSSIKLW 295
Score = 55 (24.4 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 10/31 (32%), Positives = 21/31 (67%)
Query: 179 SNDKTVTIWDMLATLLASGSNDKTVTIWDMR 209
++D T + + ++++AS S D +V IWD++
Sbjct: 507 TDDITSVTFSLDSSVIASASMDNSVRIWDIK 537
Score = 43 (20.2 bits), Expect = 7.3e-05, Sum P(3) = 7.3e-05
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
H G + RF PD+ L + +D ++ W
Sbjct: 338 HCGP-VYSTRFLPDSSALLSCSEDTSIRYW 366
Score = 36 (17.7 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 36 SPDTRLLATGGDDETVTVWRSD 57
SP + A+ D T +W D
Sbjct: 390 SPHSLFFASASYDHTARLWSFD 411
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 154 (59.3 bits), Expect = 9.2e-13, Sum P(3) = 9.2e-13
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G+ SE HT+ V SV F+ LV+ S DK++K+W + + +L HT +V C
Sbjct: 93 GKSSEFKA-HTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAK 151
Query: 168 FSCDDSLLASGSNDKTVTIWDMLATLLASGSND 200
FS D L+ S S DKT+ IWD + + +D
Sbjct: 152 FSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSD 184
Score = 148 (57.2 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 43/158 (27%), Positives = 69/158 (43%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+RC +FSPD RL+ + +D+T+ +W + + +D ++ C
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVD----FSPNGTCIA 202
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
S +I R+ Q + H+ V + F+ + LV+ S D TVK+ D+
Sbjct: 203 SAGSDHAVRIWDIRMNRLLQHYQV---HSCGVNCLSFHPSGNSLVTASSDGTVKILDLVE 259
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
I TL+ HT V +FS D L SG D V +W
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 146 (56.5 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 45/159 (28%), Positives = 69/159 (43%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
++FSP LLA+ D+TV +W D E + HT V + F
Sbjct: 66 LQFSPQGNLLASASRDKTVRLWVLDRKGKSSEF--KAHT-------APVRSVDFSADGQF 116
Query: 93 STFVKQIIPTRV-GVYGQDS-ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSL 150
+ +V +Y Q ++ RHT V +F+ L+VS S DKT+K+WD S
Sbjct: 117 LVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSK 176
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
C+ + FS + + +AS +D V IWD+
Sbjct: 177 QCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDI 215
Score = 141 (54.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 62 IMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAV 121
I+E +GH + I P C T + TF ++ + + + VG H V
Sbjct: 9 ILERYFKGH-KAAITSADFSPNCKQIATASWDTF---LMLWSLKPHARAYRYVG-HKDVV 63
Query: 122 TSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSND 181
TS++F+ + +LL S S DKTV+LW + ++HT V FS D L + S D
Sbjct: 64 TSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASED 123
Query: 182 KTVTIWDM 189
K++ +W M
Sbjct: 124 KSIKVWSM 131
Score = 112 (44.5 bits), Expect = 0.00068, P = 0.00068
Identities = 39/165 (23%), Positives = 72/165 (43%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ--GRIEGWGR-VPACPL 86
+R V FS D + L T +D+++ VW + H + GR + +C
Sbjct: 105 VRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 87 CRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLW 145
+T +++ T KQ + S++VG V F+ + + S D V++W
Sbjct: 165 DKTIKIWDTTSKQCV-------NNFSDSVG----FANFVDFSPNGTCIASAGSDHAVRIW 213
Query: 146 DVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML 190
D+ ++ + H+ V C +F + L + S+D TV I D++
Sbjct: 214 DIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLV 258
Score = 53 (23.7 bits), Expect = 9.2e-13, Sum P(3) = 9.2e-13
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 192 TLLASGSNDKTVTIWDMRGN 211
T +AS +D V IWD+R N
Sbjct: 199 TCIASAGSDHAVRIWDIRMN 218
Score = 50 (22.7 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 193 LLASGSNDKTVTIWD 207
L+ S S DKT+ IWD
Sbjct: 158 LIVSCSEDKTIKIWD 172
Score = 39 (18.8 bits), Expect = 9.2e-13, Sum P(3) = 9.2e-13
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 35 FSPDTRLLATGGDDETVTVW 54
FSP+ + +AT D + +W
Sbjct: 26 FSPNCKQIATASWDTFLMLW 45
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 161 (61.7 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW--RSDDL--SLIMETNDRGHTQGR 74
IL G H GS + C+++ D R++ TG D TV VW + ++ +LI H R
Sbjct: 239 ILTG--HTGSVL-CLQY--DERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHL--R 291
Query: 75 IEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
G + C + R + + PT + + VG H +AV V F+ K +V
Sbjct: 292 FNN-GMMVTCS--KDRSIAVW-DMASPTDITLR---RVLVG-HRAAVNVVDFDDK--YIV 341
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S S D+T+K+W+ + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 342 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 394
Score = 148 (57.2 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ C++ LE H V C F D+
Sbjct: 362 TLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 417
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD++A L
Sbjct: 418 KRIVSGAYDGKIKVWDLMAAL 438
Score = 128 (50.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLA 191
+VSG D T+K+WD +L C + L HT V C + D+ ++ +GS+D TV +WD+ A
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNA 273
Score = 124 (48.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 51/185 (27%), Positives = 78/185 (42%)
Query: 16 TELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRI 75
T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 315 TDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN--GHKRGI- 370
Query: 76 EGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
AC R R V S I G + H V +RF++K +V
Sbjct: 371 -------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 421
Query: 135 SGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVT 185
SG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T+
Sbjct: 422 SGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 479
Query: 186 IWDML 190
IWD L
Sbjct: 480 IWDFL 484
Score = 53 (23.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ SGS+D T+ +WD+
Sbjct: 379 LVVSGSSDNTIRLWDI 394
Score = 47 (21.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
+ SG+ D + +WD+ L P C
Sbjct: 420 IVSGAYDGKIKVWDLMAALDPRAPAGTLC 448
Score = 43 (20.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
++ + S D+++ +WDM
Sbjct: 296 MMVTCSKDRSIAVWDM 311
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 156 (60.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 91 VFSTFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
VFS V + V+ G T+ HT +V + F+H LL S S D T+KLWD
Sbjct: 54 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 113
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
CI+T+ H V+ + + S S DKT+ +W++
Sbjct: 114 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 156
Score = 141 (54.7 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V+SV +VS S DKT+K+W+V + C+KT H +V + D
Sbjct: 122 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 181
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+L+AS SND+TV +W ++AT
Sbjct: 182 TLIASCSNDQTVRVW-VVAT 200
Score = 131 (51.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S VT V F+ S++VS S D T+K+WD + +TL+ HT V +F LLA
Sbjct: 42 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 101
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 102 SCSADMTIKLWD 113
Score = 130 (50.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 45/173 (26%), Positives = 73/173 (42%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R VR + D L+A+ +D+TV VW E + H I W +
Sbjct: 172 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS-WAPESSYSSISE 230
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETV-------GR-------HTSAVTSVRFNHKSSLLVS 135
S K P + G +T+ G H + V V F+ ++S
Sbjct: 231 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 290
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ DKT+++WD + C+KTL +H +VT F + +GS D+TV +W+
Sbjct: 291 CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 55 (24.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 192 TLLASGSNDKTVTIW 206
TL+AS SND+TV +W
Sbjct: 182 TLIASCSNDQTVRVW 196
Score = 46 (21.3 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 327 APYVVTGSVDQTVKVWECR 345
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 159 (61.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 49/187 (26%), Positives = 90/187 (48%)
Query: 17 ELILRGSV--HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGR 74
+L+LRG++ H G + +L +G D+T+ +W +L + G+ +
Sbjct: 4 QLVLRGTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIW-----NLTRDEQAYGYPKRS 58
Query: 75 IEGWGRVPA-CPLCRTRVFSTFVKQIIPTRVGVY--GQDSETVGRHTSAVTSVRFNHKSS 131
+EG + + C + ++ R+ GQ + T HT+ V SV F+ +
Sbjct: 59 LEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNR 118
Query: 132 LLVSGSVDKTVKLWDVPSLTCIKTL--ESHTRYVTCCTFSCD--DSLLASGSNDKTVTIW 187
+VSGS D+T+KLW+ C T+ + HT +V+C FS + + ++ S DK V +W
Sbjct: 119 QIVSGSRDRTIKLWNTLG-DCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVW 177
Query: 188 DMLATLL 194
++ + L
Sbjct: 178 ELASCRL 184
Score = 132 (51.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 107 YGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCC 166
YG ++ H+ V+ + + +S S DK+++LW++ S +T HT V
Sbjct: 52 YGYPKRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSV 111
Query: 167 TFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIW 206
+FS D+ + SGS D+T+ +W+ L + DK T W
Sbjct: 112 SFSADNRQIVSGSRDRTIKLWNTLGDCKYT-ITDKGHTEW 150
Score = 129 (50.5 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 29/75 (38%), Positives = 40/75 (53%)
Query: 117 HTSAVTSVRF--NHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSL 174
HT V+ VRF N ++ ++VS DK VK+W++ S HT Y+ T S D SL
Sbjct: 147 HTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSL 206
Query: 175 LASGSNDKTVTIWDM 189
ASG D +WD+
Sbjct: 207 CASGGKDGVTMLWDL 221
Score = 102 (41.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 31/96 (32%), Positives = 52/96 (54%)
Query: 113 TVGRHTSAVTSVRFNHKS-SLLVSGSVDKTVKLW----DVPSLTCIK-TLESHTRYVTCC 166
T+ H VTS+ + ++ ++L+SGS DKT+ +W D + K +LE H+ V+ C
Sbjct: 10 TLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDC 69
Query: 167 TFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKT 202
S D + S S DK++ +W+ L+SG +T
Sbjct: 70 VISSDGAYALSASWDKSLRLWE-----LSSGQTTRT 100
Score = 49 (22.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 194 LASGSNDKTVTIWDMRGN 211
+ SGS D+T+ +W+ G+
Sbjct: 120 IVSGSRDRTIKLWNTLGD 137
Score = 45 (20.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 183 TVTIWDMLATLLASGSNDKTVTIWDM 208
TVTI +L ASG D +WD+
Sbjct: 197 TVTI-SPDGSLCASGGKDGVTMLWDL 221
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 49/159 (30%), Positives = 75/159 (47%)
Query: 40 RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWG-RVPA-CPLCRTRVFSTFVK 97
RLLATGGDD V +W + + IM GHT +E P + ++ S V
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLT--GHTSP-VESVRLNTPEELIVAGSQSGSIRVW 90
Query: 98 QIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLE 157
+ ++ T+ H + + S+ F+ + SGS D +KLWD+ C+
Sbjct: 91 DLEAAKI------LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 158 SHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLAS 196
H++ V C FS D LAS ++D TV +WD+ A + S
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Score = 108 (43.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 117 HTSAVTSVRFNHKSS-LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL 175
H S V+S+ S LL +G D V LW + CI +L HT V + + L+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 176 ASGSNDKTVTIWDMLA 191
+GS ++ +WD+ A
Sbjct: 79 VAGSQSGSIRVWDLEA 94
Score = 108 (43.1 bits), Expect = 0.00038, P = 0.00038
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H+ AV +RF+ L S + D TVKLWD+ + + HT V F ++ LLA
Sbjct: 146 HSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLA 205
Query: 177 SGSND 181
SGS+D
Sbjct: 206 SGSSD 210
Score = 51 (23.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 194 LASGSNDKTVTIWDMR 209
+ASGS D + +WD+R
Sbjct: 120 VASGSQDTNIKLWDIR 135
Score = 51 (23.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 194 LASGSNDKTVTIWDMR-GNLSVDVP 217
LAS ++D TV +WD+ G + + P
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFP 186
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 49/159 (30%), Positives = 75/159 (47%)
Query: 40 RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWG-RVPA-CPLCRTRVFSTFVK 97
RLLATGGDD V +W + + IM GHT +E P + ++ S V
Sbjct: 38 RLLATGGDDCRVNLWSINKPNCIMSLT--GHTSP-VESVRLNTPEELIVAGSQSGSIRVW 94
Query: 98 QIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLE 157
+ ++ T+ H + + S+ F+ + SGS D +KLWD+ C+
Sbjct: 95 DLEAAKI------LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 148
Query: 158 SHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLAS 196
H++ V C FS D LAS ++D TV +WD+ A + S
Sbjct: 149 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 187
Score = 111 (44.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 112 ETVGRHTSAVTSVRFNHKSS-LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSC 170
E + H S V+S+ S LL +G D V LW + CI +L HT V +
Sbjct: 18 EEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNT 77
Query: 171 DDSLLASGSNDKTVTIWDMLA 191
+ L+ +GS ++ +WD+ A
Sbjct: 78 PEELIVAGSQSGSIRVWDLEA 98
Score = 51 (23.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 194 LASGSNDKTVTIWDMR 209
+ASGS D + +WD+R
Sbjct: 124 VASGSQDTNIKLWDIR 139
Score = 51 (23.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 194 LASGSNDKTVTIWDMR-GNLSVDVP 217
LAS ++D TV +WD+ G + + P
Sbjct: 166 LASAADDHTVKLWDLTAGKMMSEFP 190
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 161 (61.7 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW--RSDDL--SLIMETNDRGHTQGR 74
IL G H GS + C+++ D R++ TG D TV VW + ++ +LI H R
Sbjct: 239 ILTG--HTGSVL-CLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHL--R 291
Query: 75 IEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
G + C + R + + PT + + VG H +AV V F+ K +V
Sbjct: 292 FNN-GMMVTCS--KDRSIAVW-DMASPTDITLR---RVLVG-HRAAVNVVDFDDK--YIV 341
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S S D+T+K+W+ + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 342 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 394
Score = 148 (57.2 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ C++ LE H V C F D+
Sbjct: 362 TLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 417
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD++A L
Sbjct: 418 KRIVSGAYDGKIKVWDLIAAL 438
Score = 127 (49.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+VSG D T+K+WD +L C + L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDV 271
Score = 124 (48.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 51/185 (27%), Positives = 78/185 (42%)
Query: 16 TELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRI 75
T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 315 TDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN--GHKRGI- 370
Query: 76 EGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
AC R R V S I G + H V +RF++K +V
Sbjct: 371 -------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 421
Query: 135 SGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVT 185
SG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T+
Sbjct: 422 SGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 479
Query: 186 IWDML 190
IWD L
Sbjct: 480 IWDFL 484
Score = 53 (23.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ SGS+D T+ +WD+
Sbjct: 379 LVVSGSSDNTIRLWDI 394
Score = 45 (20.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
+ SG+ D + +WD+ L P C
Sbjct: 420 IVSGAYDGKIKVWDLIAALDPRAPAGTLC 448
Score = 43 (20.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
++ + S D+++ +WDM
Sbjct: 296 MMVTCSKDRSIAVWDM 311
Score = 42 (19.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 184 VTIWDMLATLLASGSNDKTVTIWD 207
V + D + S S D+T+ +W+
Sbjct: 330 VNVVDFDDKYIVSASGDRTIKVWN 353
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 161 (61.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW--RSDDL--SLIMETNDRGHTQGR 74
IL G H GS + C+++ D R++ TG D TV VW + ++ +LI H R
Sbjct: 338 ILTG--HTGSVL-CLQY--DERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHL--R 390
Query: 75 IEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
G + C + R + + PT + + VG H +AV V F+ K +V
Sbjct: 391 FNN-GMMVTCS--KDRSIAVW-DMASPTDITLR---RVLVG-HRAAVNVVDFDDK--YIV 440
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S S D+T+K+W+ + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 441 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 493
Score = 148 (57.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ C++ LE H V C F D+
Sbjct: 461 TLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 516
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD++A L
Sbjct: 517 KRIVSGAYDGKIKVWDLMAAL 537
Score = 128 (50.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLA 191
+VSG D T+K+WD +L C + L HT V C + D+ ++ +GS+D TV +WD+ A
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNA 372
Score = 124 (48.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 51/185 (27%), Positives = 78/185 (42%)
Query: 16 TELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRI 75
T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 414 TDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN--GHKRGI- 469
Query: 76 EGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
AC R R V S I G + H V +RF++K +V
Sbjct: 470 -------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 520
Query: 135 SGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVT 185
SG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T+
Sbjct: 521 SGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 578
Query: 186 IWDML 190
IWD L
Sbjct: 579 IWDFL 583
Score = 53 (23.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ SGS+D T+ +WD+
Sbjct: 478 LVVSGSSDNTIRLWDI 493
Score = 47 (21.6 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
+ SG+ D + +WD+ L P C
Sbjct: 519 IVSGAYDGKIKVWDLMAALDPRAPAGTLC 547
Score = 43 (20.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
++ + S D+++ +WDM
Sbjct: 395 MMVTCSKDRSIAVWDM 410
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 161 (61.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW--RSDDL--SLIMETNDRGHTQGR 74
IL G H GS + C+++ D R++ TG D TV VW + ++ +LI H R
Sbjct: 338 ILTG--HTGSVL-CLQY--DERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHL--R 390
Query: 75 IEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
G + C + R + + PT + + VG H +AV V F+ K +V
Sbjct: 391 FNN-GMMVTCS--KDRSIAVW-DMASPTDITLR---RVLVG-HRAAVNVVDFDDK--YIV 440
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S S D+T+K+W+ + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 441 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 493
Score = 148 (57.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ C++ LE H V C F D+
Sbjct: 461 TLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 516
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD++A L
Sbjct: 517 KRIVSGAYDGKIKVWDLMAAL 537
Score = 128 (50.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLA 191
+VSG D T+K+WD +L C + L HT V C + D+ ++ +GS+D TV +WD+ A
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNA 372
Score = 124 (48.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 51/185 (27%), Positives = 78/185 (42%)
Query: 16 TELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRI 75
T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 414 TDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN--GHKRGI- 469
Query: 76 EGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
AC R R V S I G + H V +RF++K +V
Sbjct: 470 -------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 520
Query: 135 SGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVT 185
SG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T+
Sbjct: 521 SGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 578
Query: 186 IWDML 190
IWD L
Sbjct: 579 IWDFL 583
Score = 53 (23.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ SGS+D T+ +WD+
Sbjct: 478 LVVSGSSDNTIRLWDI 493
Score = 47 (21.6 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
+ SG+ D + +WD+ L P C
Sbjct: 519 IVSGAYDGKIKVWDLMAALDPRAPAGTLC 547
Score = 43 (20.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
++ + S D+++ +WDM
Sbjct: 395 MMVTCSKDRSIAVWDM 410
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 172 (65.6 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 53/158 (33%), Positives = 72/158 (45%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
CV FS +T+ LA+G D + VW S GH + P+ L +
Sbjct: 24 CVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFT--GHKDA-VTCVNFSPSGHLLASGS 80
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGR-HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSL 150
V+ +P V G+ TV R HT+ V SV F V+ S DKTVK+W
Sbjct: 81 RDKTVRIWVPN---VKGES--TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQ 135
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ +L H +V C FS D L+ S S+DKTV +WD
Sbjct: 136 KFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 169 (64.5 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 50/162 (30%), Positives = 73/162 (45%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
CV FSP LLA+G D+TV +W + T R HT V + C
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIWVPNVKG--ESTVFRAHT-------ATVRSVHFCSDG- 115
Query: 92 FSTFVKQIIPTRVGVYGQDSE----TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV 147
+FV V V+ + ++ +H + V +F+ L+VS S DKTVKLWD
Sbjct: 116 -QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 148 PSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S C+ + H +VT F + +A+ D TV +WD+
Sbjct: 175 SSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Score = 157 (60.3 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 54/201 (26%), Positives = 84/201 (41%)
Query: 23 SVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVP 82
S HI +RC +FSPD RL+ + DD+TV +W + + G G + P
Sbjct: 142 SQHINW-VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHG---GFVTYVDFHP 197
Query: 83 ACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTV 142
+ VK + R Q + H++AV + F+ + L++ S D T+
Sbjct: 198 SGTCIAAAGMDNTVK-VWDVRTHRLLQHYQL---HSAAVNGLSFHPSGNYLITASSDSTL 253
Query: 143 KLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKT 202
K+ D+ + TL H T FS ASG +D+ V +W ++ G K
Sbjct: 254 KILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGEVTKV 313
Query: 203 ----VTIWDMRGNL-SVDVPL 218
T+ GNL VD P+
Sbjct: 314 PRPPATLASSMGNLPEVDFPV 334
Score = 134 (52.2 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 30/71 (42%), Positives = 37/71 (52%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H AVT V F+ + L SGS+D + +W + + H VTC FS LLA
Sbjct: 18 HRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLA 77
Query: 177 SGSNDKTVTIW 187
SGS DKTV IW
Sbjct: 78 SGSRDKTVRIW 88
Score = 39 (18.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 196 SGSNDKTVTIW 206
+ S+DKTV +W
Sbjct: 120 TASDDKTVKVW 130
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 161 (61.7 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW--RSDDL--SLIMETNDRGHTQGR 74
IL G H GS + C+++ D R++ TG D TV VW + ++ +LI H R
Sbjct: 297 ILTG--HTGSVL-CLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHL--R 349
Query: 75 IEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
G + C + R + + PT + + VG H +AV V F+ K +V
Sbjct: 350 FNN-GMMVTCS--KDRSIAVW-DMASPTDITLR---RVLVG-HRAAVNVVDFDDK--YIV 399
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S S D+T+K+W+ + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 400 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 452
Score = 147 (56.8 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ C++ LE H V C F D+
Sbjct: 420 TLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 475
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD++A L
Sbjct: 476 KRIVSGAYDGKIKVWDLVAAL 496
Score = 126 (49.4 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+VSG D T+K+WD +L C + L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 275 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDV 329
Score = 124 (48.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 51/185 (27%), Positives = 78/185 (42%)
Query: 16 TELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRI 75
T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 373 TDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN--GHKRGI- 428
Query: 76 EGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
AC R R V S I G + H V +RF++K +V
Sbjct: 429 -------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 479
Query: 135 SGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVT 185
SG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T+
Sbjct: 480 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 537
Query: 186 IWDML 190
IWD L
Sbjct: 538 IWDFL 542
Score = 53 (23.7 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ SGS+D T+ +WD+
Sbjct: 437 LVVSGSSDNTIRLWDI 452
Score = 45 (20.9 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
+ SG+ D + +WD+ L P C
Sbjct: 478 IVSGAYDGKIKVWDLVAALDPRAPAGTLC 506
Score = 43 (20.2 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
++ + S D+++ +WDM
Sbjct: 354 MMVTCSKDRSIAVWDM 369
Score = 42 (19.8 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 184 VTIWDMLATLLASGSNDKTVTIWD 207
V + D + S S D+T+ +W+
Sbjct: 388 VNVVDFDDKYIVSASGDRTIKVWN 411
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 175 (66.7 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 52/167 (31%), Positives = 83/167 (49%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG--RIEGWGRVP 82
H G + V+FSP +RLLATGG D V +W + + + G G IE +
Sbjct: 321 HDGE-VNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIE-FDSAG 378
Query: 83 ACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTV 142
A L + F++ + + R+ T+ H+ V S +F ++ +VSGS D+T+
Sbjct: 379 AYLLAASNDFASRIWTVDDYRL------RHTLTGHSGKVLSAKFLLDNARIVSGSHDRTL 432
Query: 143 KLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
KLWD+ S CIKT+ + + +C C + + SG DK + WD+
Sbjct: 433 KLWDLRSKVCIKTVFAGS---SCNDIVCTEQCVMSGHFDKKIRFWDI 476
Score = 115 (45.5 bits), Expect = 0.00043, P = 0.00043
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 119 SAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASG 178
+ +TS+ F+ + L++ S D ++W V TL H+ V F D++ + SG
Sbjct: 367 AGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSG 426
Query: 179 SNDKTVTIWDM-----LATLLASGS-NDKTVT 204
S+D+T+ +WD+ + T+ A S ND T
Sbjct: 427 SHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCT 458
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 176 (67.0 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 57/215 (26%), Positives = 93/215 (43%)
Query: 13 FNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ 72
+N E + H +RC+ P + T DD + +W D + + GHT
Sbjct: 57 YNTLERVHMFEAH-SDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFE-GHTH 114
Query: 73 GRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSE--TVGRHTSAVTSVRF--NH 128
++ + P + S + + I +V G S T+ H V + +
Sbjct: 115 YVMQ----IVINPKDNNQFASASLDRTI--KVWQLGSSSPNFTLEGHEKGVNCIDYYSGG 168
Query: 129 KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
L+SG+ D+ VK+WD + TC++TLE H + V+C +F + ++ +GS D TV IW
Sbjct: 169 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 228
Query: 189 MLATLLASGSNDKTVTIW---DMRGNLSVDVPLNY 220
L S N +W +RG S +V L Y
Sbjct: 229 SSTYRLESTLNYGMERVWCVASLRG--SNNVALGY 261
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 161 (61.7 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW--RSDDL--SLIMETNDRGHTQGR 74
IL G H GS + C+++ D R++ TG D TV VW + ++ +LI H R
Sbjct: 302 ILTG--HTGSVL-CLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHL--R 354
Query: 75 IEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
G + C + R + + PT + + VG H +AV V F+ K +V
Sbjct: 355 FNN-GMMVTCS--KDRSIAVW-DMASPTDITLR---RVLVG-HRAAVNVVDFDDK--YIV 404
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S S D+T+K+W+ + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 405 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 457
Score = 147 (56.8 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ C++ LE H V C F D+
Sbjct: 425 TLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 480
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD++A L
Sbjct: 481 KRIVSGAYDGKIKVWDLVAAL 501
Score = 127 (49.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+VSG D T+K+WD +L C + L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 280 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDV 334
Score = 124 (48.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 51/185 (27%), Positives = 78/185 (42%)
Query: 16 TELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRI 75
T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 378 TDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN--GHKRGI- 433
Query: 76 EGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
AC R R V S I G + H V +RF++K +V
Sbjct: 434 -------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 484
Query: 135 SGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVT 185
SG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T+
Sbjct: 485 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 542
Query: 186 IWDML 190
IWD L
Sbjct: 543 IWDFL 547
Score = 53 (23.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ SGS+D T+ +WD+
Sbjct: 442 LVVSGSSDNTIRLWDI 457
Score = 45 (20.9 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
+ SG+ D + +WD+ L P C
Sbjct: 483 IVSGAYDGKIKVWDLVAALDPRAPAGTLC 511
Score = 43 (20.2 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
++ + S D+++ +WDM
Sbjct: 359 MMVTCSKDRSIAVWDM 374
Score = 42 (19.8 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 184 VTIWDMLATLLASGSNDKTVTIWD 207
V + D + S S D+T+ +W+
Sbjct: 393 VNVVDFDDKYIVSASGDRTIKVWN 416
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 150 (57.9 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 43/164 (26%), Positives = 73/164 (44%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLC 87
+ + C FSPD +LL T D + +W++ L+ + GHT G V C
Sbjct: 23 AEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVS--GHT-------GPVKCCVFS 73
Query: 88 RT-RVFSTFVKQI-IPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLW 145
R+F++ + T + + T+ H +V +V F+ L+SG D +W
Sbjct: 74 SDGRLFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIW 133
Query: 146 DVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+ S ++ L+ H V FS D +A+GS D+ V +W +
Sbjct: 134 SIQSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKL 177
Score = 103 (41.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/72 (31%), Positives = 34/72 (47%)
Query: 116 RHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL 175
RH + V F+ LL++ + LW + + ++ HT V CC FS D L
Sbjct: 20 RHKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFSSDGRLF 79
Query: 176 ASGSNDKTVTIW 187
AS S+D +V W
Sbjct: 80 ASASHDCSVRTW 91
Score = 43 (20.2 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 194 LASGSNDKTVTIWDMR 209
+A+GS D+ V +W +R
Sbjct: 163 VATGSWDRAVRVWKLR 178
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 156 (60.0 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 91 VFSTFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
VFS V + V+ G T+ HT +V + F+H LL S S D T+KLWD
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
CI+T+ H V+ + + S S DKT+ +W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 141 (54.7 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V+SV +VS S DKT+K+W+V + C+KT H +V + D
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+L+AS SND+TV +W ++AT
Sbjct: 247 TLIASCSNDQTVRVW-VVAT 265
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S VT V F+ S++VS S D T+K+WD + +TL+ HT V +F LLA
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 167 SCSADMTIKLWD 178
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 45/173 (26%), Positives = 73/173 (42%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R VR + D L+A+ +D+TV VW E + H I W +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS-WAPESSYSSISE 295
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETV-------GR-------HTSAVTSVRFNHKSSLLVS 135
S K P + G +T+ G H + V V F+ ++S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ DKT+++WD + C+KTL +H +VT F + +GS D+TV +W+
Sbjct: 356 CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 55 (24.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 192 TLLASGSNDKTVTIW 206
TL+AS SND+TV +W
Sbjct: 247 TLIASCSNDQTVRVW 261
Score = 46 (21.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 392 APYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 156 (60.0 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 91 VFSTFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
VFS V + V+ G T+ HT +V + F+H LL S S D T+KLWD
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWD 178
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
CI+T+ H V+ + + S S DKT+ +W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 141 (54.7 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V+SV +VS S DKT+K+W+V + C+KT H +V + D
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+L+AS SND+TV +W ++AT
Sbjct: 247 TLIASCSNDQTVRVW-VVAT 265
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S VT V F+ S++VS S D T+K+WD + +TL+ HT V +F LLA
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLA 166
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 167 SCSADMTIKLWD 178
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 45/173 (26%), Positives = 73/173 (42%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R VR + D L+A+ +D+TV VW E + H I W +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS-WAPESSYSSISE 295
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETV-------GR-------HTSAVTSVRFNHKSSLLVS 135
S K P + G +T+ G H + V V F+ ++S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ DKT+++WD + C+KTL +H +VT F + +GS D+TV +W+
Sbjct: 356 CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 55 (24.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 192 TLLASGSNDKTVTIW 206
TL+AS SND+TV +W
Sbjct: 247 TLIASCSNDQTVRVW 261
Score = 46 (21.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 392 APYVVTGSVDQTVKVWECR 410
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 156 (60.0 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 91 VFSTFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
VFS V + V+ G T+ HT +V + F+H LL S S D T+KLWD
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
CI+T+ H V+ + + S S DKT+ +W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 141 (54.7 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V+SV +VS S DKT+K+W+V + C+KT H +V + D
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+L+AS SND+TV +W ++AT
Sbjct: 247 TLIASCSNDQTVRVW-VVAT 265
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S VT V F+ S++VS S D T+K+WD + +TL+ HT V +F LLA
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 167 SCSADMTIKLWD 178
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 45/173 (26%), Positives = 73/173 (42%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R VR + D L+A+ +D+TV VW E + H I W +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS-WAPESSYSSISE 295
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETV-------GR-------HTSAVTSVRFNHKSSLLVS 135
S K P + G +T+ G H + V V F+ ++S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ DKT+++WD + C+KTL +H +VT F + +GS D+TV +W+
Sbjct: 356 CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 55 (24.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 192 TLLASGSNDKTVTIW 206
TL+AS SND+TV +W
Sbjct: 247 TLIASCSNDQTVRVW 261
Score = 46 (21.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 392 APYVVTGSVDQTVKVWECR 410
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 156 (60.0 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 91 VFSTFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
VFS V + V+ G T+ HT +V + F+H LL S S D T+KLWD
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
CI+T+ H V+ + + S S DKT+ +W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 141 (54.7 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V+SV +VS S DKT+K+W+V + C+KT H +V + D
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+L+AS SND+TV +W ++AT
Sbjct: 247 TLIASCSNDQTVRVW-VVAT 265
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S VT V F+ S++VS S D T+K+WD + +TL+ HT V +F LLA
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 167 SCSADMTIKLWD 178
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 45/173 (26%), Positives = 73/173 (42%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R VR + D L+A+ +D+TV VW E + H I W +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS-WAPESSYSSISE 295
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETV-------GR-------HTSAVTSVRFNHKSSLLVS 135
S K P + G +T+ G H + V V F+ ++S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ DKT+++WD + C+KTL +H +VT F + +GS D+TV +W+
Sbjct: 356 CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 55 (24.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 192 TLLASGSNDKTVTIW 206
TL+AS SND+TV +W
Sbjct: 247 TLIASCSNDQTVRVW 261
Score = 46 (21.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 392 APYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 156 (60.0 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 91 VFSTFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
VFS V + V+ G T+ HT +V + F+H LL S S D T+KLWD
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
CI+T+ H V+ + + S S DKT+ +W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 141 (54.7 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V+SV +VS S DKT+K+W+V + C+KT H +V + D
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+L+AS SND+TV +W ++AT
Sbjct: 247 TLIASCSNDQTVRVW-VVAT 265
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S VT V F+ S++VS S D T+K+WD + +TL+ HT V +F LLA
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 167 SCSADMTIKLWD 178
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 45/173 (26%), Positives = 73/173 (42%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R VR + D L+A+ +D+TV VW E + H I W +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS-WAPESSYSSISE 295
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETV-------GR-------HTSAVTSVRFNHKSSLLVS 135
S K P + G +T+ G H + V V F+ ++S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ DKT+++WD + C+KTL +H +VT F + +GS D+TV +W+
Sbjct: 356 CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 55 (24.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 192 TLLASGSNDKTVTIW 206
TL+AS SND+TV +W
Sbjct: 247 TLIASCSNDQTVRVW 261
Score = 46 (21.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 392 APYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 156 (60.0 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 91 VFSTFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
VFS V + V+ G T+ HT +V + F+H LL S S D T+KLWD
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
CI+T+ H V+ + + S S DKT+ +W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 141 (54.7 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V+SV +VS S DKT+K+W+V + C+KT H +V + D
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+L+AS SND+TV +W ++AT
Sbjct: 247 TLIASCSNDQTVRVW-VVAT 265
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S VT V F+ S++VS S D T+K+WD + +TL+ HT V +F LLA
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 167 SCSADMTIKLWD 178
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 45/173 (26%), Positives = 73/173 (42%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R VR + D L+A+ +D+TV VW E + H I W +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS-WAPESSYSSISE 295
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETV-------GR-------HTSAVTSVRFNHKSSLLVS 135
S K P + G +T+ G H + V V F+ ++S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ DKT+++WD + C+KTL +H +VT F + +GS D+TV +W+
Sbjct: 356 CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 55 (24.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 192 TLLASGSNDKTVTIW 206
TL+AS SND+TV +W
Sbjct: 247 TLIASCSNDQTVRVW 261
Score = 46 (21.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 392 APYVVTGSVDQTVKVWECR 410
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 156 (60.0 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 91 VFSTFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
VFS V + V+ G T+ HT +V + F+H LL S S D T+KLWD
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
CI+T+ H V+ + + S S DKT+ +W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 141 (54.7 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V+SV +VS S DKT+K+W+V + C+KT H +V + D
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+L+AS SND+TV +W ++AT
Sbjct: 247 TLIASCSNDQTVRVW-VVAT 265
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S VT V F+ S++VS S D T+K+WD + +TL+ HT V +F LLA
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 167 SCSADMTIKLWD 178
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 45/173 (26%), Positives = 73/173 (42%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R VR + D L+A+ +D+TV VW E + H I W +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS-WAPESSYSSISE 295
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETV-------GR-------HTSAVTSVRFNHKSSLLVS 135
S K P + G +T+ G H + V V F+ ++S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ DKT+++WD + C+KTL +H +VT F + +GS D+TV +W+
Sbjct: 356 CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 55 (24.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 192 TLLASGSNDKTVTIW 206
TL+AS SND+TV +W
Sbjct: 247 TLIASCSNDQTVRVW 261
Score = 46 (21.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 392 APYVVTGSVDQTVKVWECR 410
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 156 (60.0 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 91 VFSTFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
VFS V + V+ G T+ HT +V + F+H LL S S D T+KLWD
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
CI+T+ H V+ + + S S DKT+ +W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 141 (54.7 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V+SV +VS S DKT+K+W+V + C+KT H +V + D
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+L+AS SND+TV +W ++AT
Sbjct: 247 TLIASCSNDQTVRVW-VVAT 265
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S VT V F+ S++VS S D T+K+WD + +TL+ HT V +F LLA
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 167 SCSADMTIKLWD 178
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 45/173 (26%), Positives = 73/173 (42%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R VR + D L+A+ +D+TV VW E + H I W +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS-WAPESSYSSISE 295
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETV-------GR-------HTSAVTSVRFNHKSSLLVS 135
S K P + G +T+ G H + V V F+ ++S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ DKT+++WD + C+KTL +H +VT F + +GS D+TV +W+
Sbjct: 356 CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 55 (24.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 192 TLLASGSNDKTVTIW 206
TL+AS SND+TV +W
Sbjct: 247 TLIASCSNDQTVRVW 261
Score = 46 (21.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 392 APYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 156 (60.0 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 91 VFSTFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
VFS V + V+ G T+ HT +V + F+H LL S S D T+KLWD
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
CI+T+ H V+ + + S S DKT+ +W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 141 (54.7 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V+SV +VS S DKT+K+W+V + C+KT H +V + D
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+L+AS SND+TV +W ++AT
Sbjct: 247 TLIASCSNDQTVRVW-VVAT 265
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S VT V F+ S++VS S D T+K+WD + +TL+ HT V +F LLA
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 167 SCSADMTIKLWD 178
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 45/173 (26%), Positives = 73/173 (42%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R VR + D L+A+ +D+TV VW E + H I W +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS-WAPESSYSSISE 295
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETV-------GR-------HTSAVTSVRFNHKSSLLVS 135
S K P + G +T+ G H + V V F+ ++S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ DKT+++WD + C+KTL +H +VT F + +GS D+TV +W+
Sbjct: 356 CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 55 (24.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 192 TLLASGSNDKTVTIW 206
TL+AS SND+TV +W
Sbjct: 247 TLIASCSNDQTVRVW 261
Score = 46 (21.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 392 APYVVTGSVDQTVKVWECR 410
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 161 (61.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW--RSDDL--SLIMETNDRGHTQGR 74
IL G H GS + C+++ D R++ TG D TV VW + ++ +LI H R
Sbjct: 338 ILTG--HTGSVL-CLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHL--R 390
Query: 75 IEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
G + C + R + + PT + + VG H +AV V F+ K +V
Sbjct: 391 FNN-GMMVTCS--KDRSIAVW-DMASPTDITLR---RVLVG-HRAAVNVVDFDDK--YIV 440
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S S D+T+K+W+ + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 441 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 493
Score = 147 (56.8 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ C++ LE H V C F D+
Sbjct: 461 TLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 516
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD++A L
Sbjct: 517 KRIVSGAYDGKIKVWDLVAAL 537
Score = 127 (49.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+VSG D T+K+WD +L C + L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDV 370
Score = 124 (48.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 51/185 (27%), Positives = 78/185 (42%)
Query: 16 TELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRI 75
T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 414 TDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN--GHKRGI- 469
Query: 76 EGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
AC R R V S I G + H V +RF++K +V
Sbjct: 470 -------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 520
Query: 135 SGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVT 185
SG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T+
Sbjct: 521 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 578
Query: 186 IWDML 190
IWD L
Sbjct: 579 IWDFL 583
Score = 53 (23.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ SGS+D T+ +WD+
Sbjct: 478 LVVSGSSDNTIRLWDI 493
Score = 45 (20.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
+ SG+ D + +WD+ L P C
Sbjct: 519 IVSGAYDGKIKVWDLVAALDPRAPAGTLC 547
Score = 43 (20.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
++ + S D+++ +WDM
Sbjct: 395 MMVTCSKDRSIAVWDM 410
Score = 42 (19.8 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 184 VTIWDMLATLLASGSNDKTVTIWD 207
V + D + S S D+T+ +W+
Sbjct: 429 VNVVDFDDKYIVSASGDRTIKVWN 452
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 161 (61.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW--RSDDL--SLIMETNDRGHTQGR 74
IL G H GS + C+++ D R++ TG D TV VW + ++ +LI H R
Sbjct: 338 ILTG--HTGSVL-CLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHL--R 390
Query: 75 IEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
G + C + R + + PT + + VG H +AV V F+ K +V
Sbjct: 391 FNN-GMMVTCS--KDRSIAVW-DMASPTDITLR---RVLVG-HRAAVNVVDFDDK--YIV 440
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S S D+T+K+W+ + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 441 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 493
Score = 147 (56.8 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ C++ LE H V C F D+
Sbjct: 461 TLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 516
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD++A L
Sbjct: 517 KRIVSGAYDGKIKVWDLVAAL 537
Score = 126 (49.4 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+VSG D T+K+WD +L C + L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDV 370
Score = 124 (48.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 51/185 (27%), Positives = 78/185 (42%)
Query: 16 TELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRI 75
T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 414 TDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN--GHKRGI- 469
Query: 76 EGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
AC R R V S I G + H V +RF++K +V
Sbjct: 470 -------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 520
Query: 135 SGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVT 185
SG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T+
Sbjct: 521 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 578
Query: 186 IWDML 190
IWD L
Sbjct: 579 IWDFL 583
Score = 53 (23.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ SGS+D T+ +WD+
Sbjct: 478 LVVSGSSDNTIRLWDI 493
Score = 45 (20.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
+ SG+ D + +WD+ L P C
Sbjct: 519 IVSGAYDGKIKVWDLVAALDPRAPAGTLC 547
Score = 43 (20.2 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
++ + S D+++ +WDM
Sbjct: 395 MMVTCSKDRSIAVWDM 410
Score = 42 (19.8 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 184 VTIWDMLATLLASGSNDKTVTIWD 207
V + D + S S D+T+ +W+
Sbjct: 429 VNVVDFDDKYIVSASGDRTIKVWN 452
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 161 (61.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW--RSDDL--SLIMETNDRGHTQGR 74
IL G H GS + C+++ D R++ TG D TV VW + ++ +LI H R
Sbjct: 338 ILTG--HTGSVL-CLQY--DERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHL--R 390
Query: 75 IEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
G + C + R + + PT + + VG H +AV V F+ K +V
Sbjct: 391 FNN-GMMVTCS--KDRSIAVW-DMASPTDITLR---RVLVG-HRAAVNVVDFDDK--YIV 440
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S S D+T+K+W+ + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 441 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 493
Score = 147 (56.8 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ C++ LE H V C F D+
Sbjct: 461 TLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 516
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD++A L
Sbjct: 517 KRIVSGAYDGKIKVWDLVAAL 537
Score = 127 (49.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLA 191
+VSG D T+K+WD +L C + L HT V C + D+ ++ +GS+D TV +WD+ A
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNA 372
Score = 124 (48.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 51/185 (27%), Positives = 78/185 (42%)
Query: 16 TELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRI 75
T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 414 TDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN--GHKRGI- 469
Query: 76 EGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
AC R R V S I G + H V +RF++K +V
Sbjct: 470 -------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 520
Query: 135 SGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVT 185
SG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T+
Sbjct: 521 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 578
Query: 186 IWDML 190
IWD L
Sbjct: 579 IWDFL 583
Score = 53 (23.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ SGS+D T+ +WD+
Sbjct: 478 LVVSGSSDNTIRLWDI 493
Score = 45 (20.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
+ SG+ D + +WD+ L P C
Sbjct: 519 IVSGAYDGKIKVWDLVAALDPRAPAGTLC 547
Score = 43 (20.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
++ + S D+++ +WDM
Sbjct: 395 MMVTCSKDRSIAVWDM 410
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 176 (67.0 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 57/215 (26%), Positives = 93/215 (43%)
Query: 13 FNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ 72
+N E + H +RC+ P + T DD + +W D + + GHT
Sbjct: 57 YNTLERVHMFEAH-SDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFE-GHTH 114
Query: 73 GRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSE--TVGRHTSAVTSVRF--NH 128
++ + P + S + + I +V G S T+ H V + +
Sbjct: 115 YVMQ----IVINPKDNNQFASASLDRTI--KVWQLGSSSPNFTLEGHEKGVNCIDYYSGG 168
Query: 129 KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
L+SG+ D+ VK+WD + TC++TLE H + V+C +F + ++ +GS D TV IW
Sbjct: 169 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 228
Query: 189 MLATLLASGSNDKTVTIW---DMRGNLSVDVPLNY 220
L S N +W +RG S +V L Y
Sbjct: 229 SSTYRLESTLNYGMERVWCVASLRG--SNNVALGY 261
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 176 (67.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 52/174 (29%), Positives = 82/174 (47%)
Query: 29 NMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR 88
N CV SP+ +LLA+G D T +W DL L+ RGH +G W V P+ +
Sbjct: 488 NSVCV--SPNDKLLASGSQDRTAKLWALSDLRLLGVC--RGHRRGV---WS-VQFSPVDQ 539
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
++ + + + +T H ++V + F + + LVS D VKLW +
Sbjct: 540 ILGSASADGSVRIWSIQDFSC-LKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIK 598
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW-DMLATLLASGSNDK 201
+ C++TL++H V C D L+ +GS D T+T+W D L + S K
Sbjct: 599 TNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRKTVIIKSTKK 652
Score = 130 (50.8 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 49/159 (30%), Positives = 66/159 (41%)
Query: 41 LLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTR-VFS-----T 94
+ AT D++V VWR D S + +G G G + AC + + V S T
Sbjct: 400 MFATCAKDKSVRVWRMDVSSGRVHCVAQG--TGHSNAVGSI-ACSRMKQQFVVSGSQDCT 456
Query: 95 FVKQIIPTRVGVYG----QDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSL 150
+P G G + T H V SV + LL SGS D+T KLW + L
Sbjct: 457 VKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDL 516
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+ H R V FS D +L S S D +V IW +
Sbjct: 517 RLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSI 555
Score = 118 (46.6 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
L S S D +++WD+ S C+ LESH VT FS D L S DK ++WD+
Sbjct: 165 LFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDL 221
Score = 115 (45.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V SV+F+ +L S S D +V++W + +C+KT E H V F + L
Sbjct: 525 HRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLV 584
Query: 177 SGSNDKTVTIWDMLATLLASGSNDKTVTIWDMRG 210
S +D V +W + + +W + G
Sbjct: 585 SSGSDGLVKLWTIKTNECVRTLDAHQDKVWALHG 618
Score = 115 (45.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/75 (37%), Positives = 39/75 (52%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H+ V S+ F+ S+LL +G D T+KLWDV C L+ + V F D S L
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 164
Query: 177 --SGSNDKTVTIWDM 189
S S+D + IWD+
Sbjct: 165 LFSSSSDCAIRIWDL 179
Score = 101 (40.6 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLW--DVPS--LTCIKTLESHTRYVTCCTFS-CD 171
HT + S+ K S+ + + DK+V++W DV S + C+ H+ V S
Sbjct: 385 HTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMK 444
Query: 172 DSLLASGSNDKTVTIWDMLATLLASG 197
+ SGS D TV +WD+ T A G
Sbjct: 445 QQFVVSGSQDCTVKVWDLPETTGAEG 470
Score = 52 (23.4 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVW 54
S + + FSPD L + G D+ +VW
Sbjct: 193 SPVTALAFSPDGHTLVSSGRDKICSVW 219
Score = 48 (22.0 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 193 LLASGSNDKTVTIW 206
L+ +GS D T+T+W
Sbjct: 624 LMVTGSADSTITVW 637
Score = 45 (20.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 192 TLLASGSNDKTVTIWDMR 209
TL++SG DK ++WD++
Sbjct: 206 TLVSSG-RDKICSVWDLQ 222
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 176 (67.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 57/215 (26%), Positives = 93/215 (43%)
Query: 13 FNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ 72
+N E + H +RC+ P + T DD + +W D + + GHT
Sbjct: 86 YNTLERVHMFEAH-SDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFE-GHTH 143
Query: 73 GRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSE--TVGRHTSAVTSVRF--NH 128
++ + P + S + + I +V G S T+ H V + +
Sbjct: 144 YVMQ----IVINPKDNNQFASASLDRTI--KVWQLGSSSPNFTLEGHEKGVNCIDYYSGG 197
Query: 129 KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
L+SG+ D+ VK+WD + TC++TLE H + V+C +F + ++ +GS D TV IW
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Query: 189 MLATLLASGSNDKTVTIW---DMRGNLSVDVPLNY 220
L S N +W +RG S +V L Y
Sbjct: 258 SSTYRLESTLNYGMERVWCVASLRG--SNNVALGY 290
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 176 (67.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 57/215 (26%), Positives = 93/215 (43%)
Query: 13 FNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ 72
+N E + H +RC+ P + T DD + +W D + + GHT
Sbjct: 86 YNTLERVHMFEAH-SDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFE-GHTH 143
Query: 73 GRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSE--TVGRHTSAVTSVRF--NH 128
++ + P + S + + I +V G S T+ H V + +
Sbjct: 144 YVMQ----IVINPKDNNQFASASLDRTI--KVWQLGSSSPNFTLEGHEKGVNCIDYYSGG 197
Query: 129 KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
L+SG+ D+ VK+WD + TC++TLE H + V+C +F + ++ +GS D TV IW
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Query: 189 MLATLLASGSNDKTVTIW---DMRGNLSVDVPLNY 220
L S N +W +RG S +V L Y
Sbjct: 258 SSTYRLESTLNYGMERVWCVASLRG--SNNVALGY 290
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 176 (67.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 57/215 (26%), Positives = 93/215 (43%)
Query: 13 FNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ 72
+N E + H +RC+ P + T DD + +W D + + GHT
Sbjct: 86 YNTLERVHMFEAH-SDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFE-GHTH 143
Query: 73 GRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSE--TVGRHTSAVTSVRF--NH 128
++ + P + S + + I +V G S T+ H V + +
Sbjct: 144 YVMQ----IVINPKDNNQFASASLDRTI--KVWQLGSSSPNFTLEGHEKGVNCIDYYSGG 197
Query: 129 KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
L+SG+ D+ VK+WD + TC++TLE H + V+C +F + ++ +GS D TV IW
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Query: 189 MLATLLASGSNDKTVTIW---DMRGNLSVDVPLNY 220
L S N +W +RG S +V L Y
Sbjct: 258 SSTYRLESTLNYGMERVWCVASLRG--SNNVALGY 290
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 176 (67.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 57/215 (26%), Positives = 93/215 (43%)
Query: 13 FNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ 72
+N E + H +RC+ P + T DD + +W D + + GHT
Sbjct: 86 YNTLERVHMFEAH-SDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFE-GHTH 143
Query: 73 GRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSE--TVGRHTSAVTSVRF--NH 128
++ + P + S + + I +V G S T+ H V + +
Sbjct: 144 YVMQ----IVINPKDNNQFASASLDRTI--KVWQLGSSSPNFTLEGHEKGVNCIDYYSGG 197
Query: 129 KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
L+SG+ D+ VK+WD + TC++TLE H + V+C +F + ++ +GS D TV IW
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Query: 189 MLATLLASGSNDKTVTIW---DMRGNLSVDVPLNY 220
L S N +W +RG S +V L Y
Sbjct: 258 SSTYRLESTLNYGMERVWCVASLRG--SNNVALGY 290
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 176 (67.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 57/215 (26%), Positives = 93/215 (43%)
Query: 13 FNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ 72
+N E + H +RC+ P + T DD + +W D + + GHT
Sbjct: 86 YNTLERVHMFEAH-SDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFE-GHTH 143
Query: 73 GRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSE--TVGRHTSAVTSVRF--NH 128
++ + P + S + + I +V G S T+ H V + +
Sbjct: 144 YVMQ----IVINPKDNNQFASASLDRTI--KVWQLGSSSPNFTLEGHEKGVNCIDYYSGG 197
Query: 129 KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
L+SG+ D+ VK+WD + TC++TLE H + V+C +F + ++ +GS D TV IW
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Query: 189 MLATLLASGSNDKTVTIW---DMRGNLSVDVPLNY 220
L S N +W +RG S +V L Y
Sbjct: 258 SSTYRLESTLNYGMERVWCVASLRG--SNNVALGY 290
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 156 (60.0 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 108 GQDSETVGRHTSAVTSVRFNHK-SSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCC 166
G++ T+ H + V ++ FN+ + +GS DKT KLW V + C T HT + C
Sbjct: 124 GEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCL 183
Query: 167 TFSCDDSLLASGSNDKTVTIWDM 189
+F+ +L+A+GS D T +WD+
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDI 206
Score = 156 (60.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 52/177 (29%), Positives = 85/177 (48%)
Query: 42 LATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQIIP 101
+ATG D+T +W S + T RGHT I P L T T K +
Sbjct: 150 IATGSFDKTCKLW-SVETGKCYHTF-RGHT-AEIVCLSFNPQSTLVATGSMDTTAK-LWD 205
Query: 102 TRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTR 161
+ G++ T+ H++ + S+ FN +++GS D TV +WD + + L H
Sbjct: 206 IQ---NGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCA 262
Query: 162 YVTCCTFSCDDSLLASGSNDKTVTIWDM-----LATLLASGSNDKTV-TIWDMRGNL 212
++ +F+ D SL+ +GS DKT +WD +ATL +G +D+ + + +D G L
Sbjct: 263 EISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATL--TGHDDEILDSCFDYTGKL 317
Score = 154 (59.3 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 41/159 (25%), Positives = 73/159 (45%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW----GRVPACPLC--R 88
F+ D L+ TG D+T +W + + + GH ++ G++ A
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDATNGKCVATLT--GHDDEILDSCFDYTGKLIATASADGT 326
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
R+FS ++ I G H ++ + FN + + L++GS DKT ++WD
Sbjct: 327 ARIFSAATRKCIAKLEG-----------HEGEISKISFNPQGNHLLTGSSDKTARIWDAQ 375
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+ C++ LE HT + C F+ +++ +GS D T IW
Sbjct: 376 TGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 149 (57.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
C+ F+P + L+ATG D T +W + + RGH+ I + +
Sbjct: 182 CLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTL--RGHSAEIISLSFNTSGDRI----I 235
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
+F ++ + + +G H + ++S FN SL+++GS+DKT KLWD +
Sbjct: 236 TGSFDHTVVVWDADTGRKVNILIG-HCAEISSASFNWDCSLILTGSMDKTCKLWDATNGK 294
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
C+ TL H + F L+A+ S D T I+
Sbjct: 295 CVATLTGHDDEILDSCFDYTGKLIATASADGTARIF 330
Score = 123 (48.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD-DSLL 175
H +T+V N S ++GS D+T KLWD S + TLE H V F+ +
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKI 150
Query: 176 ASGSNDKTVTIWDM 189
A+GS DKT +W +
Sbjct: 151 ATGSFDKTCKLWSV 164
Score = 55 (24.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 191 ATLLASGSNDKTVTIWDMRGNLSV 214
+TL+A+GS D T +WD++ V
Sbjct: 189 STLVATGSMDTTAKLWDIQNGEEV 212
Score = 54 (24.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYC 221
+ +GS D TV +WD V++ + +C
Sbjct: 234 IITGSFDHTVVVWDADTGRKVNILIGHC 261
Score = 51 (23.0 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 194 LASGSNDKTVTIWD 207
L +GS+DKT IWD
Sbjct: 360 LLTGSSDKTARIWD 373
Score = 37 (18.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 193 LLASGSNDKTVTIW 206
++ +GS D T IW
Sbjct: 401 IVITGSKDNTCRIW 414
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 155 (59.6 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 48/156 (30%), Positives = 71/156 (45%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V FSP + LAT D + +W + GH + + P L +
Sbjct: 24 VDFSPSGKQLATASWDTFLMLWNCKPQARAFRYV--GH-KDVVTSVQFSPLGNLLASASR 80
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
V+ IP + G+ SE HT+ V SV F+ L + S DK++K+W++
Sbjct: 81 DRTVRLWIPDK---RGKSSEFKA-HTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRF 136
Query: 153 IKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ +L HT +V C FS D L+ S S DKT+ IWD
Sbjct: 137 LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 145 (56.1 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 45/159 (28%), Positives = 69/159 (43%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V+FSP LLA+ D TV +W D E + HT V + F
Sbjct: 66 VQFSPLGNLLASASRDRTVRLWIPDKRGKSSEF--KAHT-------APVRSVDFSADGQF 116
Query: 93 STFVKQIIPTRV-GVYGQDS-ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSL 150
+ +V +Y Q ++ RHT V +F+ L+VS S DKT+K+WD +
Sbjct: 117 LATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
C+ + F+ + + +AS +D TV IWD+
Sbjct: 177 QCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDI 215
Score = 143 (55.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 41/158 (25%), Positives = 70/158 (44%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+RC +FSPD RL+ + +D+T+ +W + + + +D ++ C
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD----FNPNGTCIA 202
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
S +I RV Q + H+ V V F+ + +++ S D T+K+ D+
Sbjct: 203 SAGSDHTVKIWDIRVNKLLQHYQV---HSGGVNCVSFHPSGNYIITASSDGTLKILDLLE 259
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
I TL+ HT V +FS L +SG D V +W
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 134 (52.2 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 114 VGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDS 173
VG H VTSV+F+ +LL S S D+TV+LW ++HT V FS D
Sbjct: 57 VG-HKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ 115
Query: 174 LLASGSNDKTVTIWDM 189
LA+ S DK++ +W+M
Sbjct: 116 FLATASEDKSIKVWNM 131
Score = 127 (49.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 42/165 (25%), Positives = 74/165 (44%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ--GRIEGWGR-VPACPL 86
+R V FS D + LAT +D+++ VW + H + GR + +C
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 87 CRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLW 145
+T +++ T KQ + S++VG V FN + + S D TVK+W
Sbjct: 165 DKTIKIWDTTNKQCV-------NNFSDSVG----FANFVDFNPNGTCIASAGSDHTVKIW 213
Query: 146 DVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML 190
D+ ++ + H+ V C +F + + + S+D T+ I D+L
Sbjct: 214 DIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLL 258
Score = 103 (41.3 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV-PSLTCIKTLESHTRYVTCCTFSCDDSLL 175
H +A+TSV F+ L + S D + LW+ P + + H VT FS +LL
Sbjct: 17 HKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYV-GHKDVVTSVQFSPLGNLL 75
Query: 176 ASGSNDKTVTIW 187
AS S D+TV +W
Sbjct: 76 ASASRDRTVRLW 87
Score = 58 (25.5 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 192 TLLASGSNDKTVTIWDMRGN 211
T +AS +D TV IWD+R N
Sbjct: 199 TCIASAGSDHTVKIWDIRVN 218
Score = 50 (22.7 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 193 LLASGSNDKTVTIWD 207
L+ S S DKT+ IWD
Sbjct: 158 LIVSCSEDKTIKIWD 172
Score = 47 (21.6 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 194 LASGSNDKTVTIWDM 208
LA+ S DK++ +W+M
Sbjct: 117 LATASEDKSIKVWNM 131
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 157 (60.3 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 50/167 (29%), Positives = 76/167 (45%)
Query: 27 GSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPL 86
G + +FSPD R LA+G D+T+ +W D+ L + HT + W A
Sbjct: 105 GEPVISAQFSPDGRGLASGSGDQTMRIW---DIELELPL----HTCKSHKSWVLCIAWSP 157
Query: 87 CRTRVFSTFVK-QIIPTRVGVYGQDSETVGRHTSAVTSVRFN--HKSS---LLVSGSVDK 140
T++ S +I Q +T+ RH +TS+ + HK LL S D
Sbjct: 158 DATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDG 217
Query: 141 TVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+ +WD T ++ L HT VTC + + L+ SGS D+TV +W
Sbjct: 218 NIFIWDTVQGTVVRCLSGHTASVTCLRWG-GEGLIYSGSQDRTVKMW 263
Score = 116 (45.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 111 SETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSC 170
S ++ H V S +F+ L SGS D+T+++WD+ + T +SH +V C +S
Sbjct: 98 SASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSP 157
Query: 171 DDSLLASGSNDKTVTIWD 188
D + +AS + + IW+
Sbjct: 158 DATKIASACKNGEICIWN 175
Score = 114 (45.2 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 36/147 (24%), Positives = 61/147 (41%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPACPLCRTR 90
C+ +SPD +A+ + + +W + I +T R H Q W + P CR
Sbjct: 152 CIAWSPDATKIASACKNGEICIWNAKTGEQIGKTLKR-HKQWITSLAWQPMHKDPTCRLL 210
Query: 91 VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSL 150
I V G + HT++VT +R+ + L+ SGS D+TVK+W
Sbjct: 211 ASCGKDGNIFIWDT-VQGTVVRCLSGHTASVTCLRWGGEG-LIYSGSQDRTVKMWRADDG 268
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLAS 177
+ + H ++ + D +L S
Sbjct: 269 VMCRNMTGHAHWINTLALNTDYALRTS 295
Score = 112 (44.5 bits), Expect = 0.00067, P = 0.00067
Identities = 37/146 (25%), Positives = 68/146 (46%)
Query: 42 LATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQIIP 101
L +G DD T+ +W + ++ +R G ++ +V P R ++F K +
Sbjct: 332 LVSGSDDFTLFMWNPKETK---QSINR--MTGHMQLVNQVVFSPDTRYIASASFDKSV-K 385
Query: 102 TRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTR 161
G G+ ++ H V V ++ S LLVSGS D T+K++++ + + L H
Sbjct: 386 LWCGRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFELKTKSLYYDLPGHGD 445
Query: 162 YVTCCTFSCDDSLLASGSNDKTVTIW 187
V +S + + + SG DK + +W
Sbjct: 446 EVFTVDWSPEGTKVVSGGKDKVLKLW 471
Score = 54 (24.1 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 178 GSNDKTVTI-WDMLATLLASGSNDKTVTIW 206
G D+ T+ W T + SG DK + +W
Sbjct: 442 GHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
Score = 46 (21.3 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 193 LLASGSNDKTVTIW 206
L+ SGS D+TV +W
Sbjct: 250 LIYSGSQDRTVKMW 263
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 194 LASGSNDKTVTIWD 207
L SGS+D T+ +W+
Sbjct: 332 LVSGSDDFTLFMWN 345
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 169 (64.5 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 50/162 (30%), Positives = 73/162 (45%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
CV FSP LLA+G D+TV +W + T R HT V + C
Sbjct: 28 CVNFSPSGHLLASGSRDKTVRIWVPNVKG--ESTVFRAHT-------ATVRSVHFCSDG- 77
Query: 92 FSTFVKQIIPTRVGVYGQDSE----TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV 147
+FV V V+ + ++ +H + V +F+ L+VS S DKTVKLWD
Sbjct: 78 -QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 136
Query: 148 PSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S C+ + H +VT F + +A+ D TV +WD+
Sbjct: 137 SSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 178
Score = 157 (60.3 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 54/201 (26%), Positives = 84/201 (41%)
Query: 23 SVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVP 82
S HI +RC +FSPD RL+ + DD+TV +W + + G G + P
Sbjct: 104 SQHINW-VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHG---GFVTYVDFHP 159
Query: 83 ACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTV 142
+ VK + R Q + H++AV + F+ + L++ S D T+
Sbjct: 160 SGTCIAAAGMDNTVK-VWDVRTHRLLQHYQL---HSAAVNGLSFHPSGNYLITASSDSTL 215
Query: 143 KLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKT 202
K+ D+ + TL H T FS ASG +D+ V +W ++ G K
Sbjct: 216 KILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGEVTKV 275
Query: 203 ----VTIWDMRGNL-SVDVPL 218
T+ GNL VD P+
Sbjct: 276 PRPPATLASSMGNLPEVDFPV 296
Score = 131 (51.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTL-ESHTRYVTCCTFSCDDSLL 175
H AVT V F+ LL SGS DKTV++W VP++ T+ +HT V F D
Sbjct: 22 HKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSF 80
Query: 176 ASGSNDKTVTIW 187
+ S+DKTV +W
Sbjct: 81 VTASDDKTVKVW 92
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 144 (55.7 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ C++ LE H V C F D+
Sbjct: 383 TLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 438
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD+ A L
Sbjct: 439 KRIVSGAYDGKIKVWDLQAAL 459
Score = 138 (53.6 bits), Expect = 7.0e-12, Sum P(3) = 7.0e-12
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 114 VGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDS 173
VG H +AV V F+ K +VS S D+T+K+W + ++TL H R + C + D
Sbjct: 345 VG-HRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DR 399
Query: 174 LLASGSNDKTVTIWDM 189
L+ SGS+D T+ +WD+
Sbjct: 400 LVVSGSSDNTIRLWDI 415
Score = 135 (52.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
++SG D ++K+WD SL C+K L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 238 IISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDV 292
Score = 119 (46.9 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
HT +V ++++ + ++V+GS D TV++WDV S + TL H V F C+ L+
Sbjct: 264 HTGSVLCLQYDER--VIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRF-CN-GLMV 319
Query: 177 SGSNDKTVTIWDM 189
+ S D+++ +WDM
Sbjct: 320 TCSKDRSIAVWDM 332
Score = 110 (43.8 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 43/160 (26%), Positives = 68/160 (42%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
C+++ D + +G D ++ +W L + GHT G V C RV
Sbjct: 230 CLQYDDDK--IISGLRDNSIKIWDKQSLECLKVLT--GHT-------GSV-LCLQYDERV 277
Query: 92 FSTFVKQIIPTRVGVY-GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSL 150
T V G+ T+ H AV +RF + L+V+ S D+++ +WD+ S
Sbjct: 278 IVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCN--GLMVTCSKDRSIAVWDMASA 335
Query: 151 TCI---KTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
T I + L H V F DD + S S D+T+ +W
Sbjct: 336 TDISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVW 373
Score = 64 (27.6 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
+L G H GS + C+++ D R++ TG D TV VW
Sbjct: 260 VLTG--HTGSVL-CLQY--DERVIVTGSSDSTVRVW 290
Score = 53 (23.7 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ SGS+D T+ +WD+
Sbjct: 400 LVVSGSSDNTIRLWDI 415
Score = 50 (22.7 bits), Expect = 7.0e-12, Sum P(3) = 7.0e-12
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
+ SG+ D + +WD++ L P + C
Sbjct: 441 IVSGAYDGKIKVWDLQAALDPRAPASTLC 469
Score = 46 (21.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 193 LLASGSNDKTVTIWDMRGNLSVDVPL 218
L+ + S D+++ +WDM + D+ L
Sbjct: 317 LMVTCSKDRSIAVWDMAS--ATDISL 340
Score = 43 (20.2 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 194 LASGSNDKTVTIWD 207
+ S S+D T+ IWD
Sbjct: 490 IISSSHDDTILIWD 503
Score = 41 (19.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 184 VTIWDMLATLLASGSNDKTVTIW 206
V + D + S S D+T+ +W
Sbjct: 351 VNVVDFDDKYIVSASGDRTIKVW 373
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 175 (66.7 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 57/215 (26%), Positives = 93/215 (43%)
Query: 13 FNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ 72
+N E + H +RC+ P + T DD + +W D + + GHT
Sbjct: 86 YNTLERVHMFEAH-SDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFE-GHTH 143
Query: 73 GRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSE--TVGRHTSAVTSVRF--NH 128
++ + P + S + + I +V G S T+ H V + +
Sbjct: 144 YVMQ----IVINPKDNNQFASASLDRTI--KVWQLGSSSPNFTLEGHEKGVNCIDYYSGG 197
Query: 129 KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
L+SG+ D+ VK+WD + TC++TLE H + V+C +F + ++ +GS D TV IW
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPELPIIITGSEDGTVRIWH 257
Query: 189 MLATLLASGSNDKTVTIW---DMRGNLSVDVPLNY 220
L S N +W +RG S +V L Y
Sbjct: 258 SSTYRLESTLNYGMERVWCVASLRG--SNNVALGY 290
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 155 (59.6 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 50/172 (29%), Positives = 75/172 (43%)
Query: 27 GSNMRCVRFSPDTRL-LATGGDDETVTVWRSDDLSLIMETNDRGHTQGRI-EGWGRVPAC 84
GS + C F+P T + TG D T +W D + M T +GH + W P
Sbjct: 143 GSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTP-MHTL-KGHYNWVLCVSWS--PDG 198
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFN--H-----KSSLLVSGS 137
+ T ++ P G + + H+ +TS+ + H L S S
Sbjct: 199 EVIATGSMDNTIRLWDPKSGQCLG---DALRGHSKWITSLSWEPIHLVKPGSKPRLASSS 255
Query: 138 VDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
D T+K+WD S C T+ HT V+C + LL SGS+D+TV +WD+
Sbjct: 256 KDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG-GQGLLYSGSHDRTVRVWDI 306
Score = 155 (59.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 48/155 (30%), Positives = 77/155 (49%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPAC-PLCRT 89
CV +SPD ++ATG D T+ +W + + RGH++ W + P +
Sbjct: 191 CVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDAL-RGHSKWITSLSWEPIHLVKPGSKP 249
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
R+ S+ I V T+ HT++V+ V++ + LL SGS D+TV++WD+ S
Sbjct: 250 RLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINS 308
Query: 150 L-TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKT 183
CI L+SH +V + S D +L G+ D T
Sbjct: 309 QGRCINILKSHAHWVNHLSLSTDYALRI-GAFDHT 342
Score = 149 (57.5 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 109 QDSETVGRHTSAVTSVRFN-HKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
+ S + H S + F H SS +V+G+ D T ++WD + T + TL+ H +V C +
Sbjct: 134 RSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVS 193
Query: 168 FSCDDSLLASGSNDKTVTIWD 188
+S D ++A+GS D T+ +WD
Sbjct: 194 WSPDGEVIATGSMDNTIRLWD 214
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/98 (32%), Positives = 44/98 (44%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V V F+ +VS S D ++KLWD I T H V +S D LL
Sbjct: 401 HQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLV 460
Query: 177 SGSNDKTVTIWDMLATLLA---SGSNDKTVTI-WDMRG 210
S S D T+ +WD+ L+ G D+ T+ W + G
Sbjct: 461 SCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDG 498
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 42/156 (26%), Positives = 62/156 (39%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
C + ++ T DD T+ +W + T G + V P R V
Sbjct: 364 CKKNGNSEEMMVTASDDYTMFLWNP-----LKSTKPIARMTGHQKLVNHVAFSPDGRYIV 418
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
++F I G G+ T H ++V V ++ LLVS S D T+K+WDV +
Sbjct: 419 SASFDNSI-KLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRK 477
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
L H V +S D + SG DK V +W
Sbjct: 478 LSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 58 (25.5 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 193 LLASGSNDKTVTIWDM 208
LL SGS+D+TV +WD+
Sbjct: 291 LLYSGSHDRTVRVWDI 306
Score = 52 (23.4 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 178 GSNDKTVTI-WDMLATLLASGSNDKTVTIW 206
G D+ T+ W + + SG DK V +W
Sbjct: 484 GHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 172 (65.6 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 58/194 (29%), Positives = 87/194 (44%)
Query: 40 RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWG-RVPA-CPLCRTRVFSTFVK 97
RLLATGGDD V +W + + IM GHT +E P + ++ S V
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLT--GHTSP-VESVRLNTPEELIVAGSQSGSIRVW 90
Query: 98 QIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLE 157
+ ++ T+ H + + S+ F+ + SGS D +KLWD+ C+
Sbjct: 91 DLEAAKI------LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 158 SHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT-----------------------LL 194
H++ V C FS D LAS ++D TV +WD+ A LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 195 ASGSNDKTVTIWDM 208
ASGS+D+T+ WD+
Sbjct: 205 ASGSSDRTIRFWDL 218
Score = 108 (43.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 117 HTSAVTSVRFNHKSS-LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL 175
H S V+S+ S LL +G D V LW + CI +L HT V + + L+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 176 ASGSNDKTVTIWDMLA 191
+GS ++ +WD+ A
Sbjct: 79 VAGSQSGSIRVWDLEA 94
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 194 LASGSNDKTVTIWDMR 209
+ASGS D + +WD+R
Sbjct: 120 VASGSQDTNIKLWDIR 135
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 170 (64.9 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 59/197 (29%), Positives = 97/197 (49%)
Query: 8 DGP-SLFNGTELILR--GSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIME 64
DG +L++ T LR G V+ S + C F+P ++ TG + +W + L E
Sbjct: 118 DGSIALWDFTSRTLRRTGVVNDTSIVAC-SFTPCGQMFITGSTYGDLRLWDLNMNHLHAE 176
Query: 65 TN--DRGHTQGR-----IEGWG-----RVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSE 112
N D G + + ++G R+ +C + + ++ ++P+ G+ Q +
Sbjct: 177 KNAHDLGVSCAQFAPKMMKGTDGCVQFRLASCG--QDSLLKIWIVSLLPS-AGIKMQLAH 233
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ ++ V S ++ +LVSGSVDKTV ++ + TL H RYVT C FS
Sbjct: 234 TLTGQSAPVLSCAYSPDGQMLVSGSVDKTVTVYQADEGVLLYTLHQHDRYVTACAFSPTA 293
Query: 173 SLLASGSNDKTVTIWDM 189
L+A+GS DK+V IW M
Sbjct: 294 PLIATGSMDKSVNIWRM 310
Score = 126 (49.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 48/166 (28%), Positives = 73/166 (43%)
Query: 29 NMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR 88
++ CV FS D LLAT D+++ V+ S D S + + GH G+G V C C
Sbjct: 14 DVNCVAFSGD--LLATCSADKSICVYSSRDFSELPFSPLSGH------GYG-VHCC--CF 62
Query: 89 TRVFSTFVKQIIPTRVGVYGQDS---ETVGRHT--SAVTSVRFNHKSSLLVSGSVDKTVK 143
+ V+ D+ E V H S V F+ SS LVSG D ++
Sbjct: 63 SACGQYLASCSTDATTMVWSMDTGEIEAVLEHPGRSPVRVCAFSPDSSHLVSGGSDGSIA 122
Query: 144 LWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
LWD S T +T + + C+F+ + +GS + +WD+
Sbjct: 123 LWDFTSRTLRRTGVVNDTSIVACSFTPCGQMFITGSTYGDLRLWDL 168
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 193 LLASGSNDKTVTIW 206
+L SGS DKTVT++
Sbjct: 253 MLVSGSVDKTVTVY 266
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 172 (65.6 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 58/194 (29%), Positives = 87/194 (44%)
Query: 40 RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWG-RVPA-CPLCRTRVFSTFVK 97
RLLATGGDD V +W + + IM GHT +E P + ++ S V
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLT--GHTSP-VESVRLNTPEELIVAGSQSGSIRVW 90
Query: 98 QIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLE 157
+ ++ T+ H + + S+ F+ + SGS D +KLWD+ C+
Sbjct: 91 DLEAAKI------LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 158 SHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT-----------------------LL 194
H++ V C FS D LAS ++D TV +WD+ A LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 195 ASGSNDKTVTIWDM 208
ASGS+D+T+ WD+
Sbjct: 205 ASGSSDRTIRFWDL 218
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 55/209 (26%), Positives = 84/209 (40%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW 78
ILR + +N+ + F P +A+G D + +W + RGH+Q +
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY--RGHSQA-VRCL 153
Query: 79 GRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSV 138
P + VK + G SE G HT V V F+ LL SGS
Sbjct: 154 RFSPDGKWLASAADDHTVK-LWDLTAGK--MMSEFPG-HTGPVNVVEFHPNEYLLASGSS 209
Query: 139 DKTVKLWDVPS---LTCIKTLESHTRYVT-----CCTFS-CDDSLLASGSN-----DKTV 184
D+T++ WD+ ++CI+ R V CC +S C DSL G D +
Sbjct: 210 DRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPERCFDVVL 269
Query: 185 TIWDMLATLLASGSNDKTVTIWDMRGNLS 213
W +A L ND+ + + + N+S
Sbjct: 270 VSWGKVADLAVC--NDQLIGVAFSQSNVS 296
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 172 (65.6 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 58/194 (29%), Positives = 87/194 (44%)
Query: 40 RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWG-RVPA-CPLCRTRVFSTFVK 97
RLLATGGDD V +W + + IM GHT +E P + ++ S V
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLT--GHTSP-VESVRLNTPEELIVAGSQSGSIRVW 90
Query: 98 QIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLE 157
+ ++ T+ H + + S+ F+ + SGS D +KLWD+ C+
Sbjct: 91 DLEAAKI------LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 158 SHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT-----------------------LL 194
H++ V C FS D LAS ++D TV +WD+ A LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 195 ASGSNDKTVTIWDM 208
ASGS+D+T+ WD+
Sbjct: 205 ASGSSDRTIRFWDL 218
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 55/209 (26%), Positives = 84/209 (40%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW 78
ILR + +N+ + F P +A+G D + +W + RGH+Q +
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY--RGHSQA-VRCL 153
Query: 79 GRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSV 138
P + VK + G SE G HT V V F+ LL SGS
Sbjct: 154 RFSPDGKWLASAADDHTVK-LWDLTAGK--MMSEFPG-HTGPVNVVEFHPNEYLLASGSS 209
Query: 139 DKTVKLWDVPS---LTCIKTLESHTRYVT-----CCTFS-CDDSLLASGSN-----DKTV 184
D+T++ WD+ ++CI+ R V CC +S C DSL G D +
Sbjct: 210 DRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPERCFDVVL 269
Query: 185 TIWDMLATLLASGSNDKTVTIWDMRGNLS 213
W +A L ND+ + + + N+S
Sbjct: 270 VNWGKVADLAIC--NDQLIGVAFSQSNVS 296
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 172 (65.6 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 58/194 (29%), Positives = 87/194 (44%)
Query: 40 RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWG-RVPA-CPLCRTRVFSTFVK 97
RLLATGGDD V +W + + IM GHT +E P + ++ S V
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLT--GHTSP-VESVRLNTPEELIVAGSQSGSIRVW 90
Query: 98 QIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLE 157
+ ++ T+ H + + S+ F+ + SGS D +KLWD+ C+
Sbjct: 91 DLEAAKI------LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 158 SHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT-----------------------LL 194
H++ V C FS D LAS ++D TV +WD+ A LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 195 ASGSNDKTVTIWDM 208
ASGS+D+T+ WD+
Sbjct: 205 ASGSSDRTIRFWDL 218
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 55/209 (26%), Positives = 84/209 (40%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW 78
ILR + +N+ + F P +A+G D + +W + RGH+Q +
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY--RGHSQA-VRCL 153
Query: 79 GRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSV 138
P + VK + G SE G HT V V F+ LL SGS
Sbjct: 154 RFSPDGKWLASAADDHTVK-LWDLTAGK--MMSEFPG-HTGPVNVVEFHPNEYLLASGSS 209
Query: 139 DKTVKLWDVPS---LTCIKTLESHTRYVT-----CCTFS-CDDSLLASGSN-----DKTV 184
D+T++ WD+ ++CI+ R V CC +S C DSL G D +
Sbjct: 210 DRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPERCFDVVL 269
Query: 185 TIWDMLATLLASGSNDKTVTIWDMRGNLS 213
W +A L ND+ + + + N+S
Sbjct: 270 VNWGKVADLAIC--NDQLIGVAFSQSNVS 296
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 172 (65.6 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 58/194 (29%), Positives = 87/194 (44%)
Query: 40 RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWG-RVPA-CPLCRTRVFSTFVK 97
RLLATGGDD V +W + + IM GHT +E P + ++ S V
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLT--GHTSP-VESVRLNTPEELIVAGSQSGSIRVW 90
Query: 98 QIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLE 157
+ ++ T+ H + + S+ F+ + SGS D +KLWD+ C+
Sbjct: 91 DLEAAKI------LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 158 SHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT-----------------------LL 194
H++ V C FS D LAS ++D TV +WD+ A LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 195 ASGSNDKTVTIWDM 208
ASGS+D+T+ WD+
Sbjct: 205 ASGSSDRTIRFWDL 218
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 55/209 (26%), Positives = 84/209 (40%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW 78
ILR + +N+ + F P +A+G D + +W + RGH+Q +
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY--RGHSQA-VRCL 153
Query: 79 GRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSV 138
P + VK + G SE G HT V V F+ LL SGS
Sbjct: 154 RFSPDGKWLASAADDHTVK-LWDLTAGK--MMSEFPG-HTGPVNVVEFHPNEYLLASGSS 209
Query: 139 DKTVKLWDVPS---LTCIKTLESHTRYVT-----CCTFS-CDDSLLASGSN-----DKTV 184
D+T++ WD+ ++CI+ R V CC +S C DSL G D +
Sbjct: 210 DRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPERCFDVVL 269
Query: 185 TIWDMLATLLASGSNDKTVTIWDMRGNLS 213
W +A L ND+ + + + N+S
Sbjct: 270 VNWGKVADLAIC--NDQLIGVAFSQSNVS 296
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 172 (65.6 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 58/194 (29%), Positives = 87/194 (44%)
Query: 40 RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWG-RVPA-CPLCRTRVFSTFVK 97
RLLATGGDD V +W + + IM GHT +E P + ++ S V
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLT--GHTSP-VESVRLNTPEELIVAGSQSGSIRVW 90
Query: 98 QIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLE 157
+ ++ T+ H + + S+ F+ + SGS D +KLWD+ C+
Sbjct: 91 DLEAAKI------LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 158 SHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT-----------------------LL 194
H++ V C FS D LAS ++D TV +WD+ A LL
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 195 ASGSNDKTVTIWDM 208
ASGS+D+T+ WD+
Sbjct: 205 ASGSSDRTIRFWDL 218
Score = 108 (43.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 117 HTSAVTSVRFNHKSS-LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL 175
H S V+S+ S LL +G D V LW + CI +L HT V + + L+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 176 ASGSNDKTVTIWDMLA 191
+GS ++ +WD+ A
Sbjct: 79 VAGSQSGSIRVWDLEA 94
Score = 51 (23.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 194 LASGSNDKTVTIWDMR 209
+ASGS D + +WD+R
Sbjct: 120 VASGSQDTNIKLWDIR 135
>POMBASE|SPAC664.15 [details] [associations]
symbol:caf4 "CCR4-Not complex subunit Caf4/Mdv1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000002
"mitochondrial genome maintenance" evidence=ISO] [GO:0000266
"mitochondrial fission" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=ISO] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0030014 "CCR4-NOT complex"
evidence=ISO] [GO:0030015 "CCR4-NOT core complex" evidence=NAS]
[GO:0051020 "GTPase binding" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC664.15 EMBL:CU329670
GO:GO:0006355 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000002
GO:GO:0030015 OrthoDB:EOG469V30 GO:GO:0000266 GO:GO:0006354
GO:GO:0051020 OMA:CVQTLDV PIR:T50245 PIR:T50289
RefSeq:XP_001713057.1 ProteinModelPortal:Q9P7I3 STRING:Q9P7I3
EnsemblFungi:SPAC664.15.1 GeneID:3361526 KEGG:spo:SPAC664.15
NextBio:20811568 Uniprot:Q9P7I3
Length = 651
Score = 157 (60.3 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H+ +TS+ F+H L + S DKTVK+WD+ + + +L+ H+ YV+C + DS +A
Sbjct: 331 HSEYITSLDFSHPFGTLATASTDKTVKVWDMAGVVYLGSLKGHSDYVSC--LAIQDSFIA 388
Query: 177 SGSNDKTVTIWDM 189
+GS D TV +W++
Sbjct: 389 TGSMDTTVRLWNL 401
Score = 122 (48.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 33/101 (32%), Positives = 55/101 (54%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDS-LL 175
HT+ VT++ + +L++G+ DKTV+ WD+ + CI+TL+ +V T S +L
Sbjct: 434 HTAPVTALALS-SDDVLITGADDKTVRQWDIVTGRCIQTLD----FVWAETHDTSTSQIL 488
Query: 176 ASGS--NDKTVTIWDMLATLLASGSNDKTVTIWDMRGNLSV 214
S + + + D L +ASG+ D + IWD+R L V
Sbjct: 489 VSDTYKQEPFIRALDCLDAAVASGTVDGLIRIWDLRIGLPV 529
Score = 56 (24.8 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDV 216
L SGS D +V IWD+R +++
Sbjct: 549 LYSGSYDNSVRIWDLRSGSPINI 571
Score = 44 (20.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 42 LATGGDDETVTVWRSDD 58
+ATG D TV +W D+
Sbjct: 387 IATGSMDTTVRLWNLDN 403
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 158 (60.7 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 53/176 (30%), Positives = 88/176 (50%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVT-VW---RSDDLSLIMETNDRG-HTQG 73
+L G H GS + C+++ D R++ TG D TV+ VW + L+ ++ N+ H
Sbjct: 255 VLTG--HTGSVL-CLQY--DERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHL-- 307
Query: 74 RIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL 133
R G + C + R + + PT + + VG H +AV V F+ K +
Sbjct: 308 RFSN-GLMVTCS--KDRSIAVW-DMASPTDITLR---RVLVG-HRAAVNVVDFDDK--YI 357
Query: 134 VSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
VS S D+T+K+W + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 358 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 411
Score = 144 (55.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ C++ LE H V C F D+
Sbjct: 379 TLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 434
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD+ A L
Sbjct: 435 KRIVSGAYDGKIKVWDLQAAL 455
Score = 128 (50.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVT-IWDM 189
++SG D ++K+WD SL C+K L HT V C + D+ ++ +GS+D TV+ +WD+
Sbjct: 233 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVSRVWDV 288
Score = 124 (48.7 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 51/185 (27%), Positives = 78/185 (42%)
Query: 16 TELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRI 75
T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 332 TDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN--GHKRGI- 387
Query: 76 EGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
AC R R V S I G + H V +RF++K +V
Sbjct: 388 -------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR--IV 438
Query: 135 SGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVT 185
SG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T+
Sbjct: 439 SGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTIL 496
Query: 186 IWDML 190
IWD L
Sbjct: 497 IWDFL 501
Score = 53 (23.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ SGS+D T+ +WD+
Sbjct: 396 LVVSGSSDNTIRLWDI 411
Score = 50 (22.7 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
+ SG+ D + +WD++ L P + C
Sbjct: 437 IVSGAYDGKIKVWDLQAALDPRAPASTLC 465
Score = 45 (20.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ + S D+++ +WDM
Sbjct: 313 LMVTCSKDRSIAVWDM 328
Score = 43 (20.2 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 194 LASGSNDKTVTIWD 207
+ S S+D T+ IWD
Sbjct: 486 IISSSHDDTILIWD 499
Score = 41 (19.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 184 VTIWDMLATLLASGSNDKTVTIW 206
V + D + S S D+T+ +W
Sbjct: 347 VNVVDFDDKYIVSASGDRTIKVW 369
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 173 (66.0 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 57/215 (26%), Positives = 92/215 (42%)
Query: 13 FNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ 72
+N E + H +RC+ P + T DD + +W D + + GHT
Sbjct: 86 YNTLERVHMFEAH-SDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFE-GHTH 143
Query: 73 GRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSE--TVGRHTSAVTSVRF--NH 128
++ + P + S + + I +V G S T+ H V + +
Sbjct: 144 YVMQ----IVINPKDNNQFASASLDRTI--KVWQLGSSSPNFTLEGHEKGVNCIDYYSGG 197
Query: 129 KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
L+SG+ D+ VK+WD + TC++T E H + V+C TF + ++ +GS D TV IW
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPELPIIITGSEDGTVRIWH 257
Query: 189 MLATLLASGSNDKTVTIW---DMRGNLSVDVPLNY 220
L S N +W +RG S +V L Y
Sbjct: 258 SSTYRLESTLNYGMERVWCVASLRG--SNNVALGY 290
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 156 (60.0 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 34/81 (41%), Positives = 47/81 (58%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G+ SE HT+ V SV F+ LLV+ S DK++K+W + + +L HT +V C
Sbjct: 93 GKSSEFKA-HTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAK 151
Query: 168 FSCDDSLLASGSNDKTVTIWD 188
FS D L+ S S DKT+ IWD
Sbjct: 152 FSPDGRLIVSCSEDKTIKIWD 172
Score = 151 (58.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 45/158 (28%), Positives = 71/158 (44%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+RC +FSPD RL+ + +D+T+ +W + + + +D ++ C
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD----FNPNGTCIA 202
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
S +I R+ Q + H+ V + F+ + LV+ S D TVK+ D+
Sbjct: 203 SAGSDHAVKIWDIRMNKLLQHYQV---HSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIE 259
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
I TL+ HT V +FS D LL SG D V IW
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 145 (56.1 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 39/128 (30%), Positives = 63/128 (49%)
Query: 62 IMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAV 121
I+E + +GH + I P C T + TF ++ + + + VG H V
Sbjct: 9 ILERSFKGH-KAAITSADFSPNCKQIATASWDTF---LMLWSLKPHARAYRYVG-HKDVV 63
Query: 122 TSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSND 181
TS++F+ + +LL S S D+TV+LW + ++HT V FS D LL + S D
Sbjct: 64 TSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASED 123
Query: 182 KTVTIWDM 189
K++ +W M
Sbjct: 124 KSIKVWSM 131
Score = 117 (46.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 41/165 (24%), Positives = 73/165 (44%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ--GRIEGWGR-VPACPL 86
+R V FS D +LL T +D+++ VW + H + GR + +C
Sbjct: 105 VRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 87 CRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLW 145
+T +++ T KQ + S++VG V FN + + S D VK+W
Sbjct: 165 DKTIKIWDTTNKQCV-------NNFSDSVG----FANFVDFNPNGTCIASAGSDHAVKIW 213
Query: 146 DVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML 190
D+ ++ + H+ V C +F + L + S+D TV + D++
Sbjct: 214 DIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLI 258
Score = 53 (23.7 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 192 TLLASGSNDKTVTIWDMRGN 211
T +AS +D V IWD+R N
Sbjct: 199 TCIASAGSDHAVKIWDIRMN 218
Score = 50 (22.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 193 LLASGSNDKTVTIWD 207
L+ S S DKT+ IWD
Sbjct: 158 LIVSCSEDKTIKIWD 172
Score = 38 (18.4 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 193 LLASGSNDKTVTIW 206
LL SG D V IW
Sbjct: 284 LLTSGGADAQVLIW 297
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 157 (60.3 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 35/95 (36%), Positives = 55/95 (57%)
Query: 95 FVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNH-KSSLLVSGSVDKTVKLWDVPSLTCI 153
F Q I RV + S ++ H A+ + F+ SS +VSGS D T ++WD + T +
Sbjct: 126 FTPQAI-FRVKAVSRCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPL 184
Query: 154 KTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
TL+ HT +V ++S + +++A+GS D TV IWD
Sbjct: 185 HTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWD 219
Score = 121 (47.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 31/98 (31%), Positives = 42/98 (42%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V V F+ + + S D VKLW+ I TL H V C FS D LL
Sbjct: 404 HQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLV 463
Query: 177 SGSNDKTVTIWDMLATLLAS---GSNDKTVTI-WDMRG 210
S S D T+ +W++ L+ G D+ + W G
Sbjct: 464 SSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDG 501
Score = 112 (44.5 bits), Expect = 0.00077, P = 0.00077
Identities = 28/80 (35%), Positives = 39/80 (48%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G+ T+ H AV F+ S LLVS S D T+K+W+V + + L H V
Sbjct: 437 GKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVD 496
Query: 168 FSCDDSLLASGSNDKTVTIW 187
+S D + SG DK + IW
Sbjct: 497 WSPDGQKVGSGGKDKAIRIW 516
Score = 112 (44.5 bits), Expect = 0.00077, P = 0.00077
Identities = 52/197 (26%), Positives = 86/197 (43%)
Query: 15 GTEL-ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG 73
GT L L+G H S + V +SP+ ++ATG D TV +W + + +GH +
Sbjct: 181 GTPLHTLKG--HT-SWVLAVSYSPNGAMIATGSMDNTVRIWDAKK-GQALGAPLKGHVKW 236
Query: 74 RIE-GWGRVPACPLCRTRVFSTFVKQIIPTRV-GVYGQDSETV-GRHTSAVTSVRFNHKS 130
W R+ S + R+ V + ++ V H +VT VR+
Sbjct: 237 ITSLAWEPYHLQQSGHPRLASASKDSTV--RIWDVISKRADIVLSGHKGSVTCVRWGGTG 294
Query: 131 SLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML 190
+ S S D+T+K+W+ + T I+TL +H V S D +L + +D T + +
Sbjct: 295 KIYTS-SHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTD-FILRTAYHDHTGKVPESD 352
Query: 191 ATLLASGSN--DKTVTI 205
A +A +K TI
Sbjct: 353 ADKVAMAKKRFEKAATI 369
Score = 52 (23.4 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 194 LASGSNDKTVTIWDM 208
LAS S D TV IWD+
Sbjct: 255 LASASKDSTVRIWDV 269
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 169 (64.5 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 60/201 (29%), Positives = 94/201 (46%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW--RSDDLSLIMETNDRGHTQGRIE 76
ILRG H ++ + F PD L +G D +V +W R+ SL + D G T +
Sbjct: 292 ILRG--H-EQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIED-GVTTVAVS 347
Query: 77 GWGR-VPACPLCRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
G+ + A L RT RV+ + ++ R+ +E H +V SV F++ +
Sbjct: 348 PDGKLIAAGSLDRTVRVWDSTTGFLVE-RLD---SGNENGNGHEDSVYSVAFSNNGEQIA 403
Query: 135 SGSVDKTVKLWDVPSL-----TCIKTLESHTRYV--TCCTFSCDDSLLASGSNDKTVTIW 187
SGS+D+TVKLW + TC T H +V CCT D+ + SGS D+ V W
Sbjct: 404 SGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCT--PDNEYILSGSKDRGVIFW 461
Query: 188 DMLA---TLLASGSNDKTVTI 205
D + L+ G + +++
Sbjct: 462 DQASGNPLLMLQGHRNSVISV 482
Score = 136 (52.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 46/186 (24%), Positives = 84/186 (45%)
Query: 10 PSLFNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRG 69
P+ ++ + S+ S + CVRFS D + +ATG + +T V+ L+ + D
Sbjct: 183 PAFSKDLDIDMVHSLDHSSVVCCVRFSRDGKFIATGCN-KTTQVFNVTTGELVAKLIDES 241
Query: 70 HTQGRIEGW---GRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGR----HTSAVT 122
+ + + G + +C + + ++ ++ + + H +
Sbjct: 242 SNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIY 301
Query: 123 SVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDK 182
S+ F LVSGS D++V++WD+ + C TL VT S D L+A+GS D+
Sbjct: 302 SLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDR 360
Query: 183 TVTIWD 188
TV +WD
Sbjct: 361 TVRVWD 366
Score = 133 (51.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 30/104 (28%), Positives = 51/104 (49%)
Query: 89 TRVFSTFVKQIIPTRVGVYG---QDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLW 145
T+VF+ +++ + +D T + SV F+ LL +G+ DK +++W
Sbjct: 223 TQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIW 282
Query: 146 DVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
D+ + IK L H + + F D L SGS D++V IWD+
Sbjct: 283 DLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDL 326
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 169 (64.5 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 60/201 (29%), Positives = 94/201 (46%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW--RSDDLSLIMETNDRGHTQGRIE 76
ILRG H ++ + F PD L +G D +V +W R+ SL + D G T +
Sbjct: 292 ILRG--H-EQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIED-GVTTVAVS 347
Query: 77 GWGR-VPACPLCRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
G+ + A L RT RV+ + ++ R+ +E H +V SV F++ +
Sbjct: 348 PDGKLIAAGSLDRTVRVWDSTTGFLVE-RLD---SGNENGNGHEDSVYSVAFSNNGEQIA 403
Query: 135 SGSVDKTVKLWDVPSL-----TCIKTLESHTRYV--TCCTFSCDDSLLASGSNDKTVTIW 187
SGS+D+TVKLW + TC T H +V CCT D+ + SGS D+ V W
Sbjct: 404 SGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCT--PDNEYILSGSKDRGVIFW 461
Query: 188 DMLA---TLLASGSNDKTVTI 205
D + L+ G + +++
Sbjct: 462 DQASGNPLLMLQGHRNSVISV 482
Score = 136 (52.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 46/186 (24%), Positives = 84/186 (45%)
Query: 10 PSLFNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRG 69
P+ ++ + S+ S + CVRFS D + +ATG + +T V+ L+ + D
Sbjct: 183 PAFSKDLDIDMVHSLDHSSVVCCVRFSRDGKFIATGCN-KTTQVFNVTTGELVAKLIDES 241
Query: 70 HTQGRIEGW---GRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGR----HTSAVT 122
+ + + G + +C + + ++ ++ + + H +
Sbjct: 242 SNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIY 301
Query: 123 SVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDK 182
S+ F LVSGS D++V++WD+ + C TL VT S D L+A+GS D+
Sbjct: 302 SLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDR 360
Query: 183 TVTIWD 188
TV +WD
Sbjct: 361 TVRVWD 366
Score = 133 (51.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 30/104 (28%), Positives = 51/104 (49%)
Query: 89 TRVFSTFVKQIIPTRVGVYG---QDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLW 145
T+VF+ +++ + +D T + SV F+ LL +G+ DK +++W
Sbjct: 223 TQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIW 282
Query: 146 DVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
D+ + IK L H + + F D L SGS D++V IWD+
Sbjct: 283 DLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDL 326
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 170 (64.9 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 51/169 (30%), Positives = 83/169 (49%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWR--SDDLSL--IMETNDRGHTQGRIEGWGR 80
H G + V+FSP +RLLATGG D V +W D + ++ G T + G
Sbjct: 321 HDGE-VNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAG- 378
Query: 81 VPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDK 140
+ L + F++ + + R+ T+ H+ V S +F ++ +VSGS D+
Sbjct: 379 --SYLLAASNDFASRIWTVDDYRL------RHTLTGHSGKVLSAKFLLDNARIVSGSHDR 430
Query: 141 TVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
T+KLWD+ S CIKT+ + + +C C + + SG DK + WD+
Sbjct: 431 TLKLWDLRSKVCIKTVFAGS---SCNDIVCTEQCVMSGHFDKKIRFWDI 476
Score = 121 (47.7 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 106 VYGQDSETVGR---HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRY 162
V+G E G + +TS+ F+ S L++ S D ++W V TL H+
Sbjct: 351 VFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGK 410
Query: 163 VTCCTFSCDDSLLASGSNDKTVTIWDM-----LATLLASGS-NDKTVT 204
V F D++ + SGS+D+T+ +WD+ + T+ A S ND T
Sbjct: 411 VLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCT 458
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 170 (64.9 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 51/167 (30%), Positives = 82/167 (49%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG--RIEGWGRVP 82
H G + V+FSP +RLLATGG D V +W + + G G IE +
Sbjct: 321 HDGE-VNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIE-FDSAG 378
Query: 83 ACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTV 142
+ L + F++ + + R+ T+ H+ V S +F ++ +VSGS D+T+
Sbjct: 379 SYLLAASNDFASRIWTVDDYRL------RHTLTGHSGKVLSAKFLLDNARIVSGSHDRTL 432
Query: 143 KLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
KLWD+ S CIKT+ + + +C C + + SG DK + WD+
Sbjct: 433 KLWDLRSKVCIKTVFAGS---SCNDIVCTEQCVMSGHFDKKIRFWDI 476
Score = 123 (48.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 106 VYGQDSETVGR---HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRY 162
V+G+ E G + +TS+ F+ S L++ S D ++W V TL H+
Sbjct: 351 VFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGK 410
Query: 163 VTCCTFSCDDSLLASGSNDKTVTIWDM-----LATLLASGS-NDKTVT 204
V F D++ + SGS+D+T+ +WD+ + T+ A S ND T
Sbjct: 411 VLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCT 458
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 170 (64.9 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 51/169 (30%), Positives = 83/169 (49%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWR--SDDLSL--IMETNDRGHTQGRIEGWGR 80
H G + V+FSP +RLLATGG D V +W D + ++ G T + G
Sbjct: 321 HDGE-VNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAG- 378
Query: 81 VPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDK 140
+ L + F++ + + R+ T+ H+ V S +F ++ +VSGS D+
Sbjct: 379 --SYLLAASNDFASRIWTVDDYRL------RHTLTGHSGKVLSAKFLLDNARIVSGSHDR 430
Query: 141 TVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
T+KLWD+ S CIKT+ + + +C C + + SG DK + WD+
Sbjct: 431 TLKLWDLRSKVCIKTVFAGS---SCNDIVCTEQCVMSGHFDKKIRFWDI 476
Score = 121 (47.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 106 VYGQDSETVGR---HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRY 162
V+G E G + +TS+ F+ S L++ S D ++W V TL H+
Sbjct: 351 VFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGK 410
Query: 163 VTCCTFSCDDSLLASGSNDKTVTIWDM-----LATLLASGS-NDKTVT 204
V F D++ + SGS+D+T+ +WD+ + T+ A S ND T
Sbjct: 411 VLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCT 458
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 170 (64.9 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 51/169 (30%), Positives = 83/169 (49%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWR--SDDLSL--IMETNDRGHTQGRIEGWGR 80
H G + V+FSP +RLLATGG D V +W D + ++ G T + G
Sbjct: 337 HDGE-VNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAG- 394
Query: 81 VPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDK 140
+ L + F++ + + R+ T+ H+ V S +F ++ +VSGS D+
Sbjct: 395 --SYLLAASNDFASRIWTVDDYRL------RHTLTGHSGKVLSAKFLLDNARIVSGSHDR 446
Query: 141 TVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
T+KLWD+ S CIKT+ + + +C C + + SG DK + WD+
Sbjct: 447 TLKLWDLRSKVCIKTVFAGS---SCNDIVCTEQCVMSGHFDKKIRFWDI 492
Score = 121 (47.7 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 106 VYGQDSETVGR---HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRY 162
V+G E G + +TS+ F+ S L++ S D ++W V TL H+
Sbjct: 367 VFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGK 426
Query: 163 VTCCTFSCDDSLLASGSNDKTVTIWDM-----LATLLASGS-NDKTVT 204
V F D++ + SGS+D+T+ +WD+ + T+ A S ND T
Sbjct: 427 VLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCT 474
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 160 (61.4 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 36/77 (46%), Positives = 45/77 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V +V N K L SGS DKT+K+WD+ +L C TLESH R V T
Sbjct: 537 TLEGHDKPVHTVLLNDK--YLFSGSSDKTIKVWDLKTLECKYTLESHARAVK--TLCISG 592
Query: 173 SLLASGSNDKTVTIWDM 189
L SGSNDKT+ +WD+
Sbjct: 593 QYLFSGSNDKTIKVWDL 609
Score = 150 (57.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 35/82 (42%), Positives = 49/82 (59%)
Query: 112 ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD 171
+T+ H V S+ +N + L SGS D ++K+WD+ L CI TLE H + V T +
Sbjct: 496 QTLKGHEGPVESICYNDQ--YLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVH--TVLLN 551
Query: 172 DSLLASGSNDKTVTIWDMLATL 193
D L SGS+DKT+ +WD L TL
Sbjct: 552 DKYLFSGSSDKTIKVWD-LKTL 572
Score = 138 (53.6 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 34/81 (41%), Positives = 47/81 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ HT VT++ + L SGS DKT+++W++ SL C TL H R+V CD
Sbjct: 617 TLKGHTKWVTTICI--LGTNLYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVI-CD- 672
Query: 173 SLLASGSNDKTVTIWDMLATL 193
LL + S+D T+ IWD L TL
Sbjct: 673 KLLFTASDDNTIKIWD-LETL 692
Score = 124 (48.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 43/148 (29%), Positives = 69/148 (46%)
Query: 42 LATGGDDETVTVWRSDDLSLIM-ETNDRGHTQGRIEGWGRVPACPLCRTRVFS-TFVKQI 99
L +G +D+T+ VW DL +GHT+ W V + T ++S ++ K I
Sbjct: 595 LFSGSNDKTIKVW---DLKTFRCNYTLKGHTK-----W--VTTICILGTNLYSGSYDKTI 644
Query: 100 IPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESH 159
+ + S T+ H V + K LL + S D T+K+WD+ +L C TLE H
Sbjct: 645 RVWNLKSL-ECSATLRGHDRWVEHMVICDK--LLFTASDDNTIKIWDLETLRCNTTLEGH 701
Query: 160 TRYVTCCTFSCDDSLLASGSNDKTVTIW 187
V C D + S S+D+++ +W
Sbjct: 702 NATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 48 (22.0 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
LL + S+D T+ IWD+
Sbjct: 674 LLFTASDDNTIKIWDL 689
Score = 39 (18.8 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 40 RLLATGGDDETVTVW 54
+ L +G D+T+ VW
Sbjct: 553 KYLFSGSSDKTIKVW 567
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 138 (53.6 bits), Expect = 9.0e-12, Sum P(3) = 9.0e-12
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S ++V F+ L SGS D +++WD CI+T + HTR ++ FS D +
Sbjct: 99 HRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVV 158
Query: 177 SGSNDKTVTIWDMLA 191
SG D V +WD+ A
Sbjct: 159 SGGLDNVVKVWDLTA 173
Score = 125 (49.1 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 40/161 (24%), Positives = 69/161 (42%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIME-TNDRGHTQG-RIEGWGRVPACPLCRT- 89
V F+ + L+ G + +W ++ ++ T R + +G A T
Sbjct: 64 VAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTN 123
Query: 90 -RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
RV+ T K I T G HT ++++ F+ +VSG +D VK+WD+
Sbjct: 124 LRVWDTRKKGCIQTYKG-----------HTRGISTIEFSPDGRWVVSGGLDNVVKVWDLT 172
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+ + + H + F + LLA+GS D+TV WD+
Sbjct: 173 AGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
Score = 123 (48.4 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
HTS V SV FN + L+++G+ +KLWD+ ++ H + F LA
Sbjct: 57 HTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLA 116
Query: 177 SGSNDKTVTIWD 188
SGS+D + +WD
Sbjct: 117 SGSSDTNLRVWD 128
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 45/162 (27%), Positives = 65/162 (40%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLC 87
SN V F P LA+G D + VW + I +T +GHT+G + P
Sbjct: 101 SNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCI-QTY-KGHTRGI----STIEFSPDG 154
Query: 88 RTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV 147
R V S + ++ G+ H + S+ F+ LL +GS D+TVK WD+
Sbjct: 155 RW-VVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
Query: 148 PSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKT-VTIWD 188
+ I T V F D L G +D V W+
Sbjct: 214 ETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWE 255
Score = 67 (28.6 bits), Expect = 9.0e-12, Sum P(3) = 9.0e-12
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 25 HIGSNMRCVRFSPDT-RLLATGGDDETVTVW 54
H G N+ C+ T RLL TGGDD V +W
Sbjct: 14 HSG-NVNCLSIGKKTSRLLLTGGDDYKVNLW 43
Score = 57 (25.1 bits), Expect = 9.0e-12, Sum P(3) = 9.0e-12
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 190 LATLLASGSNDKTVTIWDM 208
L LLA+GS D+TV WD+
Sbjct: 195 LEFLLATGSADRTVKFWDL 213
Score = 39 (18.8 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 194 LASGSNDKTVTIWDM 208
+ SG D V +WD+
Sbjct: 157 VVSGGLDNVVKVWDL 171
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 153 (58.9 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 91 VFSTFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
VFS V + V+ G T+ HT +V + F+H LL S S D T+KLWD
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
CI+T+ H V+ + + S + DKT+ +W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV 221
Score = 138 (53.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V+SV +VS + DKT+K+W+V + C+KT H +V + D
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+L+AS SND+TV +W ++AT
Sbjct: 247 TLIASCSNDQTVRVW-VVAT 265
Score = 131 (51.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S VT V F+ S++VS S D T+K+WD + +TL+ HT V +F LLA
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 167 SCSADMTIKLWD 178
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 45/173 (26%), Positives = 73/173 (42%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R VR + D L+A+ +D+TV VW E + H I W +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECIS-WAPESSYSSISE 295
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETV-------GR-------HTSAVTSVRFNHKSSLLVS 135
S K P + G +T+ G H + V V F+ ++S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ DKT+++WD + C+KTL +H +VT F + +GS D+TV +W+
Sbjct: 356 CADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 55 (24.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 192 TLLASGSNDKTVTIW 206
TL+AS SND+TV +W
Sbjct: 247 TLIASCSNDQTVRVW 261
Score = 46 (21.3 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 392 APYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 155 (59.6 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 51/181 (28%), Positives = 82/181 (45%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGH------TQGRIEGWGRVPACPLCR 88
FSPD L + +D TV +W + ++ +GH TQ G+ V
Sbjct: 311 FSPDRNYLLSSSEDGTVRLWSLQTFTCLV--GYKGHNYPVWDTQFSPYGYYFVSGGHDRV 368
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
R+++T Q P R+ G H + V RF+ S+ + +GS D+TV+LWDV
Sbjct: 369 ARLWATDHYQ--PLRI--------FAG-HLADVNCTRFHPNSNYVATGSADRTVRLWDVL 417
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIWDM 208
+ C++ H + TFS + LA+G+ D V +WD+ L+ T T+ +
Sbjct: 418 NGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSL 477
Query: 209 R 209
R
Sbjct: 478 R 478
Score = 128 (50.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + S+ F+ L +G+ D V LWD+ + L+ HT V FS D +LA
Sbjct: 428 HKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILA 487
Query: 177 SGSNDKTVTIWD 188
SGS D TV +WD
Sbjct: 488 SGSMDNTVRLWD 499
Score = 126 (49.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 39/122 (31%), Positives = 59/122 (48%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC 84
H+ +++ C RF P++ +ATG D TV +W D L+ GH +G I +
Sbjct: 386 HL-ADVNCTRFHPNSNYVATGSADRTVRLW--DVLNGNCVRIFTGH-KGPIHS---LTFS 438
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKL 144
P R +++ +G E G HT V S+RF+ +L SGS+D TV+L
Sbjct: 439 PNGRFLATGATDGRVLLWDIGHGLMVGELKG-HTDTVCSLRFSRDGEILASGSMDNTVRL 497
Query: 145 WD 146
WD
Sbjct: 498 WD 499
Score = 97 (39.2 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H+ V F+ + L+S S D TV+LW + + TC+ + H V FS
Sbjct: 302 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 361
Query: 177 SGSNDKTVTIW 187
SG +D+ +W
Sbjct: 362 SGGHDRVARLW 372
Score = 55 (24.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 193 LLASGSNDKTVTIWD 207
+LASGS D TV +WD
Sbjct: 485 ILASGSMDNTVRLWD 499
Score = 46 (21.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+ V + D+ L+A G D TV VW
Sbjct: 233 LTAVDVTDDSSLIAGGFADSTVRVW 257
Score = 45 (20.9 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 194 LASGSNDKTVTIWDMRGNLSV 214
LA+G+ D V +WD+ L V
Sbjct: 444 LATGATDGRVLLWDIGHGLMV 464
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 170 (64.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 58/203 (28%), Positives = 84/203 (41%)
Query: 30 MRCVRFS-PDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR 88
+ C++ +R+L TGG+D V +W + I+ GH+ G I+ + L
Sbjct: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY--GHSSG-IDSVTFDASEGLVA 75
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
S +K V T+ H S SV F+ SGS+D +K+WD+
Sbjct: 76 AGAASGTIKLWDLEEAKVV----RTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIR 131
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT---------------- 192
CI T + HTR V F+ D + SG D V +WD+ A
Sbjct: 132 KKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSL 191
Query: 193 -------LLASGSNDKTVTIWDM 208
LLA+GS DKTV WD+
Sbjct: 192 DFHPHEFLLATGSADKTVKFWDL 214
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 31/87 (35%), Positives = 44/87 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
HT V +RF +VSG D VK+WD+ + + +SH + F + LLA
Sbjct: 142 HTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLA 201
Query: 177 SGSNDKTVTIWDMLA-TLLASGSNDKT 202
+GS DKTV WD+ L+ SG + T
Sbjct: 202 TGSADKTVKFWDLETFELIGSGGTETT 228
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 117 HTSAVTSVRFNHKSS-LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL 175
H++AV ++ KSS +LV+G D V LW + I +L H+ + TF + L+
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 74
Query: 176 ASGSNDKTVTIWDM 189
A+G+ T+ +WD+
Sbjct: 75 AAGAASGTIKLWDL 88
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 168 (64.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 54/171 (31%), Positives = 84/171 (49%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVW-----RSDDLSLIMETNDRGHTQGRIEGWG 79
H G + VRFSP +RLLATGG D V +W R + + +N G T + G
Sbjct: 316 HDGE-VNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSN-AGITSIEFDSAG 373
Query: 80 RVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVD 139
+ L + F++ + + R+ T+ H+ V S RF ++ +VSGS D
Sbjct: 374 ---SYLLAASNDFASRIWTVDDYRL------RHTLTGHSGKVLSARFLLDNARIVSGSYD 424
Query: 140 KTVKLWDVPSLTC-IKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+T+KLWD+ S C +KT+ + + +C C + + SG DK V WD+
Sbjct: 425 RTLKLWDLRSKVCSMKTVFAGS---SCNDIVCTEQCVMSGHFDKKVRFWDI 472
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 156 (60.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 108 GQDSETVGRHTSAVTSVRFNHK-SSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCC 166
G++ T+ H + V ++ FN+ + +GS DKT KLW V + C T HT + C
Sbjct: 124 GEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCL 183
Query: 167 TFSCDDSLLASGSNDKTVTIWDM 189
+F+ +L+A+GS D T +WD+
Sbjct: 184 SFNPQSTLVATGSMDTTAKLWDI 206
Score = 156 (60.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 52/177 (29%), Positives = 86/177 (48%)
Query: 42 LATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQIIP 101
+ATG D+T +W S + T RGHT I P L T T K +
Sbjct: 150 IATGSFDKTCKLW-SVETGKCYHTF-RGHT-AEIVCLSFNPQSTLVATGSMDTTAK-LWD 205
Query: 102 TRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTR 161
+ G ++ T+ H++ + S+ FN + +++GS D TV +W+ + + TL H
Sbjct: 206 IQSG---EEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCA 262
Query: 162 YVTCCTFSCDDSLLASGSNDKTVTIWDML-----ATLLASGSNDKTV-TIWDMRGNL 212
++ F+ D SL+ +GS DKT +WD + ATL +G +D+ + + +D G L
Sbjct: 263 EISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATL--TGHDDEILDSCFDYTGKL 317
Score = 153 (58.9 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 40/159 (25%), Positives = 72/159 (45%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW----GRVPACPLC--R 88
F+ D L+ TG D+T +W + + + GH ++ G++ A
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDAVNGKCVATLT--GHDDEILDSCFDYTGKLIATASADGT 326
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
R+FS ++ + G H ++ + FN + + L++GS DKT ++WD
Sbjct: 327 ARIFSAATRECVTKLEG-----------HEGEISKISFNPQGNRLLTGSSDKTARIWDAQ 375
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+ C++ LE HT + C F+ ++ +GS D T IW
Sbjct: 376 TGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 128 (50.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 38/155 (24%), Positives = 62/155 (40%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDR-GHTQGRIEGWGRVPACPLCRTRVFS 93
F+ + TG D TVTVW +D + + W C L T
Sbjct: 227 FNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWD----CSLILTGSMD 282
Query: 94 TFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCI 153
K V G+ T+ H + F++ L+ + S D T +++ + C+
Sbjct: 283 KTCK----LWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECV 338
Query: 154 KTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
LE H ++ +F+ + L +GS+DKT IWD
Sbjct: 339 TKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
Score = 122 (48.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD-DSLL 175
H +T+V N S ++GS D+T KLWD S + TLE H V F+ +
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI 150
Query: 176 ASGSNDKTVTIWDM 189
A+GS DKT +W +
Sbjct: 151 ATGSFDKTCKLWSV 164
Score = 55 (24.4 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 191 ATLLASGSNDKTVTIWDMRGNLSV 214
+TL+A+GS D T +WD++ V
Sbjct: 189 STLVATGSMDTTAKLWDIQSGEEV 212
Score = 48 (22.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYC 221
+ +GS D TVT+W+ V + +C
Sbjct: 234 IITGSFDHTVTVWEADTGRKVYTLIGHC 261
Score = 38 (18.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 193 LLASGSNDKTVTIW 206
++ +GS D T IW
Sbjct: 401 IIITGSKDNTCRIW 414
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 162 (62.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 48/159 (30%), Positives = 77/159 (48%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR--TRVF 92
FS D + +A+ G D+T+ V++++ +++ + H V C + +
Sbjct: 623 FSQDGQRIASCGADKTLQVFKAETGEKLLDI--KAHED-------EVLCCAFSSDDSYIA 673
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSS--LLVSGSVDKTVKLWDVPSL 150
+ V + + G+ T H+ V F +KS+ LL +GS D +KLWD+
Sbjct: 674 TCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQK 733
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
C T+ HT VT C FS DD LLAS S D T+ +WD+
Sbjct: 734 ECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDV 772
Score = 123 (48.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
HT AV F+ + S DKT++++ + + +++H V CC FS DDS +A
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIA 673
Query: 177 SGSNDKTVTIWD 188
+ S DK V IWD
Sbjct: 674 TCSVDKKVKIWD 685
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 39/161 (24%), Positives = 67/161 (41%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR- 88
+R ++F+ D + L + +D + VW +T + Q E V L R
Sbjct: 1006 VRHIQFTADGKTLISSSEDSVIQVWN-------WQTEEYVFLQAHQE---TVKDFRLLRD 1055
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
+R+ S + + G+ H V S + ++ S S DKT K+W
Sbjct: 1056 SRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFE 1115
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+ + L+ H V C FS D LLA+G ++ + IW++
Sbjct: 1116 LPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNV 1156
Score = 42 (19.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 191 ATLLASGSNDKTVTIW 206
AT +S S DKT IW
Sbjct: 1097 ATKFSSTSADKTAKIW 1112
Score = 40 (19.1 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 5/14 (35%), Positives = 11/14 (78%)
Query: 196 SGSNDKTVTIWDMR 209
+ S+D+T+ +W+ R
Sbjct: 899 TASDDQTIRVWETR 912
Score = 37 (18.1 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
LLA+G ++ + IW++
Sbjct: 1141 LLATGDDNGEIRIWNV 1156
Score = 37 (18.1 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 179 SNDKTVTIWDMLA-TLLASGSNDKTVTIWDM-RGNLSVD 215
++ +TV + +L + L S S D TV +W++ G + D
Sbjct: 1042 AHQETVKDFRLLRDSRLLSWSFDGTVKVWNVITGRIERD 1080
>TAIR|locus:2040731 [details] [associations]
symbol:AT2G37670 "AT2G37670" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AC004684 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 IPI:IPI00535445 PIR:T02533 RefSeq:NP_181303.1
UniGene:At.50121 ProteinModelPortal:O80935 SMR:O80935
EnsemblPlants:AT2G37670.1 GeneID:818344 KEGG:ath:AT2G37670
TAIR:At2g37670 HOGENOM:HOG000239143 InParanoid:O80935 OMA:GWIKVRQ
PhylomeDB:O80935 ProtClustDB:CLSN2683085 ArrayExpress:O80935
Genevestigator:O80935 Uniprot:O80935
Length = 903
Score = 170 (64.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 53/172 (30%), Positives = 81/172 (47%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHT---------QGR----IEGWG 79
++FS D LA+GG D + VW + L M N+ T G +E
Sbjct: 410 IKFSQDAHYLASGGADRVIHVWEVQECEL-MSMNEGSLTPIHPSLCDSSGNEITVVEKKK 468
Query: 80 RVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSE-TVGRHTSAVTSVRFNHKSSLLVSGSV 138
+ R +V +P V + ++ H A+ + ++ KS LL+S S+
Sbjct: 469 KGKGSSGRRHNHIPDYVH--VPETVFSFSDKPVCSLKGHLDAILDLSWS-KSQLLLSSSM 525
Query: 139 DKTVKLWDVPSLTCIKTLESHTRYVTCCTFS-CDDSLLASGSNDKTVTIWDM 189
DKTV+LWD+ + TC+K L +H YVTC FS D++ SGS D + IW +
Sbjct: 526 DKTVRLWDIETKTCLK-LFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSI 576
>TAIR|locus:2019494 [details] [associations]
symbol:AT1G64610 "AT1G64610" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS;RCA] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0000303 "response to superoxide" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0007154 "cell
communication" evidence=RCA] [GO:0008219 "cell death" evidence=RCA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009627 "systemic
acquired resistance" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009723 "response to
ethylene stimulus" evidence=RCA] [GO:0009738 "abscisic acid
mediated signaling pathway" evidence=RCA] [GO:0009755
"hormone-mediated signaling pathway" evidence=RCA] [GO:0009862
"systemic acquired resistance, salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009873 "ethylene
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=RCA]
[GO:0031348 "negative regulation of defense response" evidence=RCA]
[GO:0043069 "negative regulation of programmed cell death"
evidence=RCA] [GO:0045087 "innate immune response" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000239143 UniGene:At.27085
EMBL:AY064059 EMBL:AY096369 IPI:IPI00529043 RefSeq:NP_176642.1
RefSeq:NP_974089.1 ProteinModelPortal:Q8VZK1 SMR:Q8VZK1
STRING:Q8VZK1 PRIDE:Q8VZK1 EnsemblPlants:AT1G64610.1
EnsemblPlants:AT1G64610.2 GeneID:842769 KEGG:ath:AT1G64610
TAIR:At1g64610 InParanoid:Q8VZK1 OMA:SEDSYIN PhylomeDB:Q8VZK1
ProtClustDB:CLSN2679320 ArrayExpress:Q8VZK1 Genevestigator:Q8VZK1
Uniprot:Q8VZK1
Length = 647
Score = 168 (64.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 56/182 (30%), Positives = 83/182 (45%)
Query: 23 SVHIGSNMRCVRFSPDTRLLATGGDDETVTVW------RSD-------DLSLIMETNDRG 69
S H GS + ++FSPD + +A+ G+D V VW R+D D + N R
Sbjct: 215 SAHDGSIL-AMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRS 273
Query: 70 HTQG-RIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNH 128
+ +I R ST V + PT + + H + + ++
Sbjct: 274 QIEPLKINNEKTEKKSSFLRKSSDSTCVV-LPPTIFSISEKPLHEFKGHIGEILDLSWSE 332
Query: 129 KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFS-CDDSLLASGSNDKTVTIW 187
K LL S SVD+TV+LW V C++T +H +VTC F+ DD+ SGS D V IW
Sbjct: 333 KGYLL-SSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIW 390
Query: 188 DM 189
D+
Sbjct: 391 DV 392
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 169 (64.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 57/212 (26%), Positives = 93/212 (43%)
Query: 13 FNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ 72
+N E + H +RC+ P L+ T DD + +W + + + GHT
Sbjct: 86 YNTLEKVHSFEAH-SDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFE-GHTH 143
Query: 73 GRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSE----TVGRHTSAVTSVRFNH 128
++ + P + +TF + V V+ S T+ H V V + H
Sbjct: 144 YVMQ----IVFNP----KDNNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYH 195
Query: 129 KSS--LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTI 186
L+SG+ D+ VK+WD + TC++TLE H + ++ F + ++ +GS D TV I
Sbjct: 196 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPELPIVLTGSEDGTVRI 255
Query: 187 WDM----LATLLASGSNDKTVTIWDMRGNLSV 214
W L T L G ++ TI MRG +V
Sbjct: 256 WHSGTYRLETCLNYGF-ERVWTISSMRGTNNV 286
Score = 125 (49.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 46/162 (28%), Positives = 70/162 (43%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R RF + TG DD + V+ + L + H+ + P PL T
Sbjct: 60 VRSARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFE--AHSD-YLRCIAVHPTQPLVLT 116
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHK-SSLLVSGSVDKTVKLWDVP 148
+K ++ + E G HT V + FN K ++ S S+D+TVK+W +
Sbjct: 117 SSDDMLIKLWNWEKMWACQRVFE--G-HTHYVMQIVFNPKDNNTFASASLDRTVKVWQLG 173
Query: 149 SLTCIKTLESHTRYVTCCTF--SCDDSLLASGSNDKTVTIWD 188
S TLE H + V C + D L SG++D+ V IWD
Sbjct: 174 SNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 169 (64.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 54/209 (25%), Positives = 90/209 (43%)
Query: 13 FNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ 72
+N E + H +RC+ P + T DD + +W + + + GHT
Sbjct: 86 YNTLERVHMFEAH-SDYIRCIAVHPTQPYILTSSDDMLIKLWDWEKKWSCSQVFE-GHTH 143
Query: 73 GRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSE--TVGRHTSAVTSVRF--NH 128
++ + P + S + + I +V G S T+ H V + +
Sbjct: 144 YVMQ----IVINPKDNNQFASASLDRTI--KVWQLGSSSPNFTLEGHDKGVNCIDYYSGG 197
Query: 129 KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
L+SG+ D+ VK+WD + TC++TLE H + V+C F + ++ +GS D TV IW
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPELPIIITGSEDGTVRIWH 257
Query: 189 MLATLLASGSNDKTVTIW---DMRGNLSV 214
L S N +W +RG+ SV
Sbjct: 258 SSTYRLESTLNYGMERVWCVSGLRGSNSV 286
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 150 (57.9 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 39/118 (33%), Positives = 56/118 (47%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
HT+ V SV F+ L + S DK++K+W + + +L HT +V C FS D L+
Sbjct: 101 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 177 SGSNDKTVTIWDML-----------------------ATLLASGSNDKTVTIWDMRGN 211
S S DKT+ IWD T +AS +D+TV +WD+R N
Sbjct: 161 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 218
Score = 149 (57.5 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 44/158 (27%), Positives = 72/158 (45%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+RC +FSPD RL+ + +D+T+ +W + + + +D + G P+ C
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD---SVGFANFVDFNPS-GTCIA 202
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
S ++ RV Q + H+ V + F+ + LV+ S D T+K+ D+
Sbjct: 203 SAGSDQTVKVWDVRVNKLLQHYQV---HSGGVNCISFHPSDNYLVTASSDGTLKILDLLE 259
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
I TL+ HT V +FS L ASG D V +W
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 138 (53.6 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ--GRIEGWGR-VPACPL 86
+R V FS D + LAT +D+++ VW + H + GR + +C
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 87 CRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLW 145
+T +++ T KQ + S++VG V FN + + S D+TVK+W
Sbjct: 165 DKTIKIWDTTNKQCV-------NNFSDSVG----FANFVDFNPSGTCIASAGSDQTVKVW 213
Query: 146 DVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML 190
DV ++ + H+ V C +F D+ L + S+D T+ I D+L
Sbjct: 214 DVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLL 258
Score = 136 (52.9 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 114 VGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDS 173
VG H VTSV+F+ +LL S S D+TV+LW ++HT V FS D
Sbjct: 57 VG-HKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ 115
Query: 174 LLASGSNDKTVTIWDM 189
LA+ S DK++ +W M
Sbjct: 116 FLATASEDKSIKVWSM 131
Score = 59 (25.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHT 71
V+FSP LLA+ D TV +W D E + HT
Sbjct: 66 VQFSPHGNLLASASRDRTVRLWIPDKRGKFSEF--KAHT 102
Score = 36 (17.7 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 193 LLASGSNDKTVTIW 206
L ASG D V +W
Sbjct: 284 LFASGGADTQVLLW 297
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 156 (60.0 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 52/181 (28%), Positives = 83/181 (45%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGH------TQGRIEGWGRVPACPLCR 88
FSPD L + +D TV +W + ++ +GH TQ G+ V
Sbjct: 531 FSPDRNYLLSCSEDGTVRLWSLQTFTCLV--GYKGHNYPVWDTQFSPYGYYFVSGGHDRV 588
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
R+++T Q P R+ G H + VT RF+ S+ + +GS D+TV+LWDV
Sbjct: 589 ARLWATDHYQ--PLRI--------FAG-HLADVTCTRFHPNSNYIATGSADRTVRLWDVL 637
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIWDM 208
+ C++ H + FS + LA+G+ D V +WD+ L+ T TI+ +
Sbjct: 638 NGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYAL 697
Query: 209 R 209
R
Sbjct: 698 R 698
Score = 127 (49.8 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + S+ F+ L +G+ D V LWD+ + L+ HT + FS D +LA
Sbjct: 648 HKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILA 707
Query: 177 SGSNDKTVTIWD 188
SGS D TV +WD
Sbjct: 708 SGSMDNTVRLWD 719
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC 84
H+ +++ C RF P++ +ATG D TV +W D L+ GH +G I P
Sbjct: 606 HL-ADVTCTRFHPNSNYIATGSADRTVRLW--DVLNGNCVRIFTGH-KGPIHSLAFSPNG 661
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKL 144
T +++ +G E G HT + ++RF+ +L SGS+D TV+L
Sbjct: 662 RFLATGATDG---RVLLWDIGHGLMVGELKG-HTDTIYALRFSRDGEILASGSMDNTVRL 717
Query: 145 WD 146
WD
Sbjct: 718 WD 719
Score = 55 (24.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 193 LLASGSNDKTVTIWD 207
+LASGS D TV +WD
Sbjct: 705 ILASGSMDNTVRLWD 719
Score = 45 (20.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 34 RFSPDTRLLATGGDDETVTVWRSD 57
+FSP +GG D +W +D
Sbjct: 572 QFSPYGYYFVSGGHDRVARLWATD 595
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 150 (57.9 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 39/118 (33%), Positives = 56/118 (47%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
HT+ V SV F+ L + S DK++K+W + + +L HT +V C FS D L+
Sbjct: 101 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 177 SGSNDKTVTIWDML-----------------------ATLLASGSNDKTVTIWDMRGN 211
S S DKT+ IWD T +AS +D+TV +WD+R N
Sbjct: 161 SCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 218
Score = 148 (57.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 43/158 (27%), Positives = 72/158 (45%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+RC +FSPD RL+ + +D+T+ +W + + + +D + G P+ C
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD---SVGFANFVDFNPS-GTCIA 202
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
S ++ RV Q + H+ V + F+ + L++ S D T+K+ D+
Sbjct: 203 SAGSDQTVKVWDVRVNKLLQHYQV---HSGGVNCISFHPSGNYLITASSDGTLKILDLLE 259
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
I TL+ HT V +FS L ASG D V +W
Sbjct: 260 GRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 136 (52.9 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 114 VGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDS 173
VG H VTSV+F+ +LL S S D+TV+LW ++HT V FS D
Sbjct: 57 VG-HKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ 115
Query: 174 LLASGSNDKTVTIWDM 189
LA+ S DK++ +W M
Sbjct: 116 FLATASEDKSIKVWSM 131
Score = 132 (51.5 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 116 RHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL 175
RHT V +F+ L+VS S DKT+K+WD + C+ + F+ + +
Sbjct: 142 RHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCI 201
Query: 176 ASGSNDKTVTIWDM 189
AS +D+TV +WD+
Sbjct: 202 ASAGSDQTVKVWDV 215
Score = 59 (25.8 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHT 71
V+FSP LLA+ D TV +W D E + HT
Sbjct: 66 VQFSPHGNLLASASRDRTVRLWIPDKRGKFSEF--KAHT 102
Score = 36 (17.7 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 193 LLASGSNDKTVTIW 206
L ASG D V +W
Sbjct: 284 LFASGGADTQVLLW 297
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 151 (58.2 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 55/177 (31%), Positives = 74/177 (41%)
Query: 20 LRGSVHIGSN--MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEG 77
L GS IG + VRFS + A+G V VW SD+LS + RGHT R+ G
Sbjct: 164 LMGS-QIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLF--RGHTD-RVSG 219
Query: 78 WGRVPACPLCRTRVFS-TFVKQIIPTRVGVYGQDSET----VGRHTSAVTSVRFNHKSSL 132
P C T V ++ T + H + V V F+
Sbjct: 220 LDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDY 279
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
LVS S D T +LWDV + + E H+ + D SL++SG ND IWD+
Sbjct: 280 LVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDL 336
Score = 138 (53.6 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 49/168 (29%), Positives = 75/168 (44%)
Query: 32 CVRFSPDTR--LLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
C + D+ LATG D TV +W++ + ++ GH R+ GRV P
Sbjct: 226 CQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLE--GHL-ARV---GRVAFHPSGDY 279
Query: 90 RVFSTF--VKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV 147
V ++F ++ GV E G H+ + S+ SL+ SG D ++WD+
Sbjct: 280 LVSASFDTTWRLWDVHTGVELLMQE--G-HSEGIFSIACQPDGSLVSSGGNDAIGRIWDL 336
Query: 148 PSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLA 195
S I L+ H R + +S + LA+ S D TV IWD+ LA
Sbjct: 337 RSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLA 384
Score = 57 (25.1 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 192 TLLASGSNDKTVTIWDMRGNLSVDV 216
+L++SG ND IWD+R S+ V
Sbjct: 320 SLVSSGGNDAIGRIWDLRSGKSIMV 344
Score = 55 (24.4 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 187 WDMLATLLASGSNDKTVTIWDMRG-NLSVDVP 217
W LA+ S D TV IWD+R +L+ +P
Sbjct: 357 WSPNGYQLATSSADDTVKIWDLRKVSLAHTIP 388
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 154 (59.3 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 48/150 (32%), Positives = 69/150 (46%)
Query: 40 RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQI 99
RLL TG D T+ +W LI + GH+ G V ++ + + +
Sbjct: 313 RLLFTGSYDSTIGIWDLFTGKLIRRLS--GHSDG-------VKTLYFDDRKLITGSLDKT 363
Query: 100 IPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESH 159
I + G+ T H+ +V SV K ++VSGS DKTVK+W V S TC TL H
Sbjct: 364 IRVWNYITGECISTYRGHSDSVLSVDSYQK--VIVSGSADKTVKVWHVESRTCY-TLRGH 420
Query: 160 TRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
T +V C S S+D T+ +WD+
Sbjct: 421 TEWVNCVKLHPKSFSCFSCSDDTTIRMWDI 450
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 29/92 (31%), Positives = 50/92 (54%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V +++FN++ LL +GS D T+ +WD+ + I+ L H+ V F DD L
Sbjct: 301 HMDGVLTLQFNYR--LLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF--DDRKLI 356
Query: 177 SGSNDKTVTIWDMLATLLAS---GSNDKTVTI 205
+GS DKT+ +W+ + S G +D +++
Sbjct: 357 TGSLDKTIRVWNYITGECISTYRGHSDSVLSV 388
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 44/166 (26%), Positives = 70/166 (42%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC----- 84
+ CV+ P + + DD T+ +W S + RGH G+++ +P
Sbjct: 424 VNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVF--RGHV-GQVQKI--IPLTIKDVE 478
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQD-SETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVK 143
L Q PT G D S+T V + + LL G +D T+K
Sbjct: 479 NLATDNTSDGSSPQDDPTMTD--GADESDTPSNEQETVLDENIPYPTHLLSCG-LDNTIK 535
Query: 144 LWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
LWDV + CI+T H V + D+ + SGS+D ++ +WD+
Sbjct: 536 LWDVKTGKCIRTQFGHVEGVW--DIAADNFRIISGSHDGSIKVWDL 579
Score = 104 (41.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 42/154 (27%), Positives = 68/154 (44%)
Query: 12 LFNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHT 71
LF G +LI R S H ++ + F D R L TG D+T+ VW I + RGH+
Sbjct: 329 LFTG-KLIRRLSGH-SDGVKTLYF--DDRKLITGSLDKTIRVWNYITGECI--STYRGHS 382
Query: 72 QG--RIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHK 129
++ + +V + S + + V + T+ HT V V+ + K
Sbjct: 383 DSVLSVDSYQKV---------IVSGSADKTVKVW-HVESRTCYTLRGHTEWVNCVKLHPK 432
Query: 130 SSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
S S S D T+++WD+ + +C+K H V
Sbjct: 433 SFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQV 466
Score = 56 (24.8 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 186 IWDMLAT--LLASGSNDKTVTIWDMR 209
+WD+ A + SGS+D ++ +WD++
Sbjct: 555 VWDIAADNFRIISGSHDGSIKVWDLQ 580
Score = 47 (21.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 196 SGSNDKTVTIWDMRGNLSVDV 216
S S+D T+ +WD+R N + V
Sbjct: 438 SCSDDTTIRMWDIRTNSCLKV 458
Score = 37 (18.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 174 LLASGSNDKTVTIWDMLATLLASGSNDKTVTIWDM 208
LL+ G D T+ +WD+ +WD+
Sbjct: 525 LLSCGL-DNTIKLWDVKTGKCIRTQFGHVEGVWDI 558
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 165 (63.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 56/170 (32%), Positives = 77/170 (45%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW 78
+LRG H + C++ D +L TG DD T+ VW D +M T GHT G W
Sbjct: 250 VLRG--HEDHVITCMQIHDD--VLVTGSDDNTLKVWCIDK-GEVMYTLV-GHTGGV---W 300
Query: 79 GRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSV 138
C + S + + V G T+ HTS V + S+LV+GS
Sbjct: 301 --TSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSR 356
Query: 139 DKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
D T+++WDV S + TL H V C F D + + SG D TV IW+
Sbjct: 357 DTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWN 404
Score = 156 (60.0 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 54/185 (29%), Positives = 82/185 (44%)
Query: 40 RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQI 99
R + +G D TV VW + D SL+ +GHT + C S V
Sbjct: 309 RYIVSGSTDRTVKVWSTVDGSLLHTL--QGHT-----------STVRCMAMAGSILVTGS 355
Query: 100 IPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKT 155
T + V+ G+ T+ H +AV V+F+ + +VSG D TVK+W+ + CI+T
Sbjct: 356 RDTTLRVWDVESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRT 413
Query: 156 LESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML------ATLLASGSNDKTVTIWDMR 209
L H V F + S++ SGS D ++ +WD L G T + +R
Sbjct: 414 LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGM-QLR 472
Query: 210 GNLSV 214
GN+ V
Sbjct: 473 GNILV 477
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G+ T+ HT V + + + +VSGS D+TVK+W + + TL+ HT V C
Sbjct: 286 GEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMA 345
Query: 168 FSCDDSLLASGSNDKTVTIWDM 189
+ S+L +GS D T+ +WD+
Sbjct: 346 MA--GSILVTGSRDTTLRVWDV 365
Score = 124 (48.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 42/161 (26%), Positives = 75/161 (46%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+RCV+F T + +GG D TV +W + I GH +C
Sbjct: 381 VRCVQFDGTT--VVSGGYDFTVKIWNAHTGRCIRTLT--GHNNRVYSLLFESERSIVCSG 436
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGR-HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
+ T ++ TR GQ+ + + HTS + ++ + ++LVS + D V++WD+
Sbjct: 437 SL-DTSIRVWDFTRPE--GQECVALLQGHTSLTSGMQL--RGNILVSCNADSHVRVWDIH 491
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
TC+ L H +T + +++A+ S+D TV +WD+
Sbjct: 492 EGTCVHMLSGHRSAITSLQWF-GRNMVATSSDDGTVKLWDI 531
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 165 (63.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 56/170 (32%), Positives = 77/170 (45%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW 78
+LRG H + C++ D +L TG DD T+ VW D +M T GHT G W
Sbjct: 250 VLRG--HEDHVITCMQIHDD--VLVTGSDDNTLKVWCIDK-GEVMYTLV-GHTGGV---W 300
Query: 79 GRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSV 138
C + S + + V G T+ HTS V + S+LV+GS
Sbjct: 301 --TSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM--AGSILVTGSR 356
Query: 139 DKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
D T+++WDV S + TL H V C F D + + SG D TV IW+
Sbjct: 357 DTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWN 404
Score = 156 (60.0 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 54/185 (29%), Positives = 82/185 (44%)
Query: 40 RLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQI 99
R + +G D TV VW + D SL+ +GHT + C S V
Sbjct: 309 RYIVSGSTDRTVKVWSTVDGSLLHTL--QGHT-----------STVRCMAMAGSILVTGS 355
Query: 100 IPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKT 155
T + V+ G+ T+ H +AV V+F+ + +VSG D TVK+W+ + CI+T
Sbjct: 356 RDTTLRVWDVESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRT 413
Query: 156 LESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML------ATLLASGSNDKTVTIWDMR 209
L H V F + S++ SGS D ++ +WD L G T + +R
Sbjct: 414 LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGM-QLR 472
Query: 210 GNLSV 214
GN+ V
Sbjct: 473 GNILV 477
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G+ T+ HT V + + + +VSGS D+TVK+W + + TL+ HT V C
Sbjct: 286 GEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMA 345
Query: 168 FSCDDSLLASGSNDKTVTIWDM 189
+ S+L +GS D T+ +WD+
Sbjct: 346 MA--GSILVTGSRDTTLRVWDV 365
Score = 124 (48.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 42/161 (26%), Positives = 75/161 (46%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+RCV+F T + +GG D TV +W + I GH +C
Sbjct: 381 VRCVQFDGTT--VVSGGYDFTVKIWNAHTGRCIRTLT--GHNNRVYSLLFESERSIVCSG 436
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGR-HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
+ T ++ TR GQ+ + + HTS + ++ + ++LVS + D V++WD+
Sbjct: 437 SL-DTSIRVWDFTRPE--GQECVALLQGHTSLTSGMQL--RGNILVSCNADSHVRVWDIH 491
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
TC+ L H +T + +++A+ S+D TV +WD+
Sbjct: 492 EGTCVHMLSGHRSAITSLQWF-GRNMVATSSDDGTVKLWDI 531
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V S+ F+ L S D+ +KLWD+ S T K L HT +T FS D L+A
Sbjct: 21 HRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIA 80
Query: 177 SGSNDKTVTIWDMLATLL---ASGSNDKTVTIW--DMRGNLSV 214
S S D +V +WD+ +T A GS+ + V ++ M LSV
Sbjct: 81 SASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSV 123
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 164 (62.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 56/178 (31%), Positives = 81/178 (45%)
Query: 20 LRGSVHIGS-NMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW 78
L+GS G ++ R SP+ +ATG V ++ +L M N RGHT ++ G
Sbjct: 198 LQGSQTAGQRHISITRISPNGETVATGNWGGQVKLFSIPNLDETM--NLRGHTN-KVSGM 254
Query: 79 GRVPACPLCRTRVFSTFVKQII---PTRVGVYG--QDSE--TVGRHTSAVTSVRFNHKSS 131
P L + V + V +V ++ QD+ T+ HT V V F+
Sbjct: 255 CWFPGATLQESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGR 314
Query: 132 LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
L S S D + +LWDV T + E H+R V +F+ D SLLAS D IWD+
Sbjct: 315 FLASASEDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDL 372
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 53/200 (26%), Positives = 84/200 (42%)
Query: 27 GSNMRCVRFSPDTRLLATGGDDETVTVWR-SDDLSLIMETNDRGHTQGRIEGWGRVPACP 85
G+ ++ S ++ LATGG + V +W S D L + GHTQ R+ RV P
Sbjct: 259 GATLQESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLS---GHTQ-RV---CRVDFHP 311
Query: 86 LCRTRVFSTFVKQIIPTRVGVYGQDSETVGR--HTSAVTSVRFNHKSSLLVSGSVDKTVK 143
R F + R+ + +E + + H+ V +V FN SLL S D +
Sbjct: 312 SGR---FLASASEDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGR 368
Query: 144 LWDVPSLTCIKTLESHT----RYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSN 199
+WD+ + I L+ H + + + D + S S D + WD+ G
Sbjct: 369 IWDLRTGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKCWDVRKVQRTGGVG 428
Query: 200 DKTVTIWDMRGNLSVDVPLN 219
T + DMR +D PL+
Sbjct: 429 AHTSAVSDMRWFKGLDGPLD 448
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 157 (60.3 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 32/87 (36%), Positives = 52/87 (59%)
Query: 103 RVGVYGQDSETVGRHTSAVTSVRFNHK-SSLLVSGSVDKTVKLWDVPSLTCIKTLESHTR 161
RV + + ++ H + S +F+ SS LV+GS D T +LWD + T I T++ HT
Sbjct: 119 RVRAVTRCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTN 178
Query: 162 YVTCCTFSCDDSLLASGSNDKTVTIWD 188
+V+C ++ D S++A+GS D T+ WD
Sbjct: 179 WVSCVAWAPDASIIATGSMDNTIRFWD 205
Score = 151 (58.2 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 49/164 (29%), Positives = 73/164 (44%)
Query: 34 RFSPDTRL-LATGGDDETVTVWRSDDLSLIMETNDRGHTQG-RIEGWGRVPACPLCRTRV 91
+FSP T L TG D T +W D + I +GHT W P + T
Sbjct: 141 QFSPSTSSRLVTGSGDFTARLWDCDTQTPIATM--KGHTNWVSCVAWA--PDASIIATGS 196
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFN--HKSS-----LLVSGSVDKTVKL 144
++ P + G + + RHT + ++ + H + LL SGS D TV++
Sbjct: 197 MDNTIRFWDPKKGSPIG---DALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRI 253
Query: 145 WDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
W+V T + TL HT +TC + + + S S DKT+ IWD
Sbjct: 254 WNVKLRTLLFTLSGHTAPITCVRWG-GQNWIYSSSYDKTIRIWD 296
Score = 129 (50.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 42/157 (26%), Positives = 72/157 (45%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-GWGRVPACPLCRTR 90
CV ++PD ++ATG D T+ W S I + R HT+ + W + P
Sbjct: 182 CVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRR-HTKPIMALCWQPLHLAPDSGPY 240
Query: 91 VFSTFVKQIIPTRVGVYGQDSETV----GRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
+ ++ K V ++ T+ HT+ +T VR+ ++ + S S DKT+++WD
Sbjct: 241 LLASGSKD---NTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQN-WIYSSSYDKTIRIWD 296
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKT 183
C+ L+ H V + S + +L SG+ D T
Sbjct: 297 AKDGKCLHILKGHAARVNHLSLSTEH-VLRSGAYDHT 332
Score = 121 (47.7 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 32/83 (38%), Positives = 41/83 (49%)
Query: 105 GVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVT 164
G G+ T+ H +AV ++ S LLVS S D T+K+WDV S L H V
Sbjct: 418 GKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVF 477
Query: 165 CCTFSCDDSLLASGSNDKTVTIW 187
+S D +ASG DK V IW
Sbjct: 478 AVDWSPDGQRVASGGADKAVRIW 500
Score = 121 (47.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 28/98 (28%), Positives = 43/98 (43%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H V F+ + + S D +V+LWD + + TL H V C +S D LL
Sbjct: 388 HQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLV 447
Query: 177 SGSNDKTVTIWDMLATLLA---SGSNDKTVTI-WDMRG 210
S S D T+ +WD+ + + G D+ + W G
Sbjct: 448 SSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDG 485
Score = 55 (24.4 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 35 FSPDTRLLATGGDDETVTVW 54
FSPD R +AT D +V +W
Sbjct: 397 FSPDGRCIATASFDSSVRLW 416
Score = 49 (22.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 178 GSNDKTVTI-WDMLATLLASGSNDKTVTIW 206
G D+ + W +ASG DK V IW
Sbjct: 471 GHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 46 (21.3 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 196 SGSNDKTVTIWDMR 209
S S DKT+ IWD +
Sbjct: 285 SSSYDKTIRIWDAK 298
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 141 (54.7 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V+SV +VS S DKT+K+W+V + C+KT H +V + D
Sbjct: 16 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 75
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+L+AS SND+TV +W ++AT
Sbjct: 76 TLIASCSNDQTVRVW-VVAT 94
Score = 132 (51.5 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 28/85 (32%), Positives = 45/85 (52%)
Query: 107 YGQDSETVGR---HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
Y SE G H + V V F+ ++S + DKT+++WD + C+KTL +H +V
Sbjct: 119 YSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV 178
Query: 164 TCCTFSCDDSLLASGSNDKTVTIWD 188
T F + +GS D+TV +W+
Sbjct: 179 TSLDFHKTAPYVVTGSVDQTVKVWE 203
Score = 104 (41.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 112 ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD 171
+T H V VR N +L+ S S D+TV++W V + C L H V C +++ +
Sbjct: 57 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 116
Query: 172 DSLL----ASGS---NDKTV--TIWDMLATLLASGSNDKTVTIWDMR 209
S A+GS +D V ++ + S ++DKT+ +WD +
Sbjct: 117 SSYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 163
Score = 97 (39.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 141 TVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
T+KLWD CI+T+ H V+ + + S S DKT+ +W++
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 50
Score = 53 (23.7 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+R VR + D L+A+ +D+TV VW
Sbjct: 66 VRMVRPNQDGTLIASCSNDQTVRVW 90
Score = 46 (21.3 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 187 APYVVTGSVDQTVKVWECR 205
Score = 41 (19.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 13 FNGTELI--LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
F G E I + G H N+ V P+ + + D+T+ +W
Sbjct: 8 FQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTIKMW 48
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 155 (59.6 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 51/181 (28%), Positives = 82/181 (45%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGH------TQGRIEGWGRVPACPLCR 88
FSPD L + +D TV +W + ++ +GH TQ G+ V
Sbjct: 549 FSPDRNYLLSSSEDGTVRLWSLQTFTCLV--GYKGHNYPVWDTQFSPYGYYFVSGGHDRV 606
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
R+++T Q P R+ G H + V RF+ S+ + +GS D+TV+LWDV
Sbjct: 607 ARLWATDHYQ--PLRI--------FAG-HLADVNCTRFHPNSNYVATGSADRTVRLWDVL 655
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIWDM 208
+ C++ H + TFS + LA+G+ D V +WD+ L+ T T+ +
Sbjct: 656 NGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSL 715
Query: 209 R 209
R
Sbjct: 716 R 716
Score = 129 (50.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + S+ F+ L +G+ D V LWD+ + L+ HT V FS D +LA
Sbjct: 666 HKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILA 725
Query: 177 SGSNDKTVTIWDML 190
SGS D TV +WD +
Sbjct: 726 SGSMDNTVRLWDAI 739
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 41/134 (30%), Positives = 65/134 (48%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC 84
H+ +++ C RF P++ +ATG D TV +W D L+ GH +G I +
Sbjct: 624 HL-ADVNCTRFHPNSNYVATGSADRTVRLW--DVLNGNCVRIFTGH-KGPIHS---LTFS 676
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKL 144
P R +++ +G E G HT V S+RF+ +L SGS+D TV+L
Sbjct: 677 PNGRFLATGATDGRVLLWDIGHGLMVGELKG-HTDTVCSLRFSRDGEILASGSMDNTVRL 735
Query: 145 WDVPSLTCIKTLES 158
WD ++ + LE+
Sbjct: 736 WD--AIKAFEDLET 747
Score = 97 (39.2 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H+ V F+ + L+S S D TV+LW + + TC+ + H V FS
Sbjct: 540 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 599
Query: 177 SGSNDKTVTIW 187
SG +D+ +W
Sbjct: 600 SGGHDRVARLW 610
Score = 55 (24.4 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 193 LLASGSNDKTVTIWD 207
+LASGS D TV +WD
Sbjct: 723 ILASGSMDNTVRLWD 737
Score = 46 (21.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+ V + D+ L+A G D TV VW
Sbjct: 471 LTAVDVTDDSSLIAGGFADSTVRVW 495
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 155 (59.6 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 51/181 (28%), Positives = 82/181 (45%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGH------TQGRIEGWGRVPACPLCR 88
FSPD L + +D TV +W + ++ +GH TQ G+ V
Sbjct: 551 FSPDRNYLLSSSEDGTVRLWSLQTFTCLV--GYKGHNYPVWDTQFSPYGYYFVSGGHDRV 608
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
R+++T Q P R+ G H + V RF+ S+ + +GS D+TV+LWDV
Sbjct: 609 ARLWATDHYQ--PLRI--------FAG-HLADVNCTRFHPNSNYVATGSADRTVRLWDVL 657
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIWDM 208
+ C++ H + TFS + LA+G+ D V +WD+ L+ T T+ +
Sbjct: 658 NGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSL 717
Query: 209 R 209
R
Sbjct: 718 R 718
Score = 129 (50.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + S+ F+ L +G+ D V LWD+ + L+ HT V FS D +LA
Sbjct: 668 HKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILA 727
Query: 177 SGSNDKTVTIWDML 190
SGS D TV +WD +
Sbjct: 728 SGSMDNTVRLWDAI 741
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 41/134 (30%), Positives = 65/134 (48%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC 84
H+ +++ C RF P++ +ATG D TV +W D L+ GH +G I +
Sbjct: 626 HL-ADVNCTRFHPNSNYVATGSADRTVRLW--DVLNGNCVRIFTGH-KGPIHS---LTFS 678
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKL 144
P R +++ +G E G HT V S+RF+ +L SGS+D TV+L
Sbjct: 679 PNGRFLATGATDGRVLLWDIGHGLMVGELKG-HTDTVCSLRFSRDGEILASGSMDNTVRL 737
Query: 145 WDVPSLTCIKTLES 158
WD ++ + LE+
Sbjct: 738 WD--AIKAFEDLET 749
Score = 97 (39.2 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H+ V F+ + L+S S D TV+LW + + TC+ + H V FS
Sbjct: 542 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 601
Query: 177 SGSNDKTVTIW 187
SG +D+ +W
Sbjct: 602 SGGHDRVARLW 612
Score = 55 (24.4 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 193 LLASGSNDKTVTIWD 207
+LASGS D TV +WD
Sbjct: 725 ILASGSMDNTVRLWD 739
Score = 46 (21.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+ V + D+ L+A G D TV VW
Sbjct: 473 LTAVDVTDDSSLIAGGFADSTVRVW 497
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 155 (59.6 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 51/181 (28%), Positives = 82/181 (45%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGH------TQGRIEGWGRVPACPLCR 88
FSPD L + +D TV +W + ++ +GH TQ G+ V
Sbjct: 551 FSPDRNYLLSSSEDGTVRLWSLQTFTCLV--GYKGHNYPVWDTQFSPYGYYFVSGGHDRV 608
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
R+++T Q P R+ G H + V RF+ S+ + +GS D+TV+LWDV
Sbjct: 609 ARLWATDHYQ--PLRI--------FAG-HLADVNCTRFHPNSNYVATGSADRTVRLWDVL 657
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIWDM 208
+ C++ H + TFS + LA+G+ D V +WD+ L+ T T+ +
Sbjct: 658 NGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSL 717
Query: 209 R 209
R
Sbjct: 718 R 718
Score = 128 (50.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + S+ F+ L +G+ D V LWD+ + L+ HT V FS D +LA
Sbjct: 668 HKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILA 727
Query: 177 SGSNDKTVTIWD 188
SGS D TV +WD
Sbjct: 728 SGSMDNTVRLWD 739
Score = 126 (49.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/122 (31%), Positives = 59/122 (48%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC 84
H+ +++ C RF P++ +ATG D TV +W D L+ GH +G I +
Sbjct: 626 HL-ADVNCTRFHPNSNYVATGSADRTVRLW--DVLNGNCVRIFTGH-KGPIHS---LTFS 678
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKL 144
P R +++ +G E G HT V S+RF+ +L SGS+D TV+L
Sbjct: 679 PNGRFLATGATDGRVLLWDIGHGLMVGELKG-HTDTVCSLRFSRDGEILASGSMDNTVRL 737
Query: 145 WD 146
WD
Sbjct: 738 WD 739
Score = 97 (39.2 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H+ V F+ + L+S S D TV+LW + + TC+ + H V FS
Sbjct: 542 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 601
Query: 177 SGSNDKTVTIW 187
SG +D+ +W
Sbjct: 602 SGGHDRVARLW 612
Score = 55 (24.4 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 193 LLASGSNDKTVTIWD 207
+LASGS D TV +WD
Sbjct: 725 ILASGSMDNTVRLWD 739
Score = 46 (21.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+ V + D+ L+A G D TV VW
Sbjct: 473 LTAVDVTDDSSLIAGGFADSTVRVW 497
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 155 (59.6 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 51/181 (28%), Positives = 82/181 (45%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGH------TQGRIEGWGRVPACPLCR 88
FSPD L + +D TV +W + ++ +GH TQ G+ V
Sbjct: 552 FSPDRNYLLSSSEDGTVRLWSLQTFTCLV--GYKGHNYPVWDTQFSPYGYYFVSGGHDRV 609
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
R+++T Q P R+ G H + V RF+ S+ + +GS D+TV+LWDV
Sbjct: 610 ARLWATDHYQ--PLRI--------FAG-HLADVNCTRFHPNSNYVATGSADRTVRLWDVL 658
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIWDM 208
+ C++ H + TFS + LA+G+ D V +WD+ L+ T T+ +
Sbjct: 659 NGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSL 718
Query: 209 R 209
R
Sbjct: 719 R 719
Score = 128 (50.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + S+ F+ L +G+ D V LWD+ + L+ HT V FS D +LA
Sbjct: 669 HKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILA 728
Query: 177 SGSNDKTVTIWD 188
SGS D TV +WD
Sbjct: 729 SGSMDNTVRLWD 740
Score = 126 (49.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/122 (31%), Positives = 59/122 (48%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC 84
H+ +++ C RF P++ +ATG D TV +W D L+ GH +G I +
Sbjct: 627 HL-ADVNCTRFHPNSNYVATGSADRTVRLW--DVLNGNCVRIFTGH-KGPIHS---LTFS 679
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKL 144
P R +++ +G E G HT V S+RF+ +L SGS+D TV+L
Sbjct: 680 PNGRFLATGATDGRVLLWDIGHGLMVGELKG-HTDTVCSLRFSRDGEILASGSMDNTVRL 738
Query: 145 WD 146
WD
Sbjct: 739 WD 740
Score = 97 (39.2 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H+ V F+ + L+S S D TV+LW + + TC+ + H V FS
Sbjct: 543 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 602
Query: 177 SGSNDKTVTIW 187
SG +D+ +W
Sbjct: 603 SGGHDRVARLW 613
Score = 55 (24.4 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 193 LLASGSNDKTVTIWD 207
+LASGS D TV +WD
Sbjct: 726 ILASGSMDNTVRLWD 740
Score = 46 (21.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+ V + D+ L+A G D TV VW
Sbjct: 474 LTAVDVTDDSSLIAGGFADSTVRVW 498
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 155 (59.6 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 91 VFSTFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
VFS V + V+ G T+ HT +V + F+H LL S S D T+KLWD
Sbjct: 119 VFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWD 178
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
CI+T+ H V+ + + S S DKT+ +W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 54/196 (27%), Positives = 81/196 (41%)
Query: 17 ELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE 76
E L+G H S ++ + F +LLA+ D T+ +W I + H
Sbjct: 143 ERTLKG--HTDS-VQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS-- 197
Query: 77 GWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSG 136
V P V ++ K I V G +T H V VR N +L+ S
Sbjct: 198 ----VAIMPNGDHIVSASRDKTIKMWEVAT-GYCVKTFTGHREWVRMVRPNQDGTLIASS 252
Query: 137 SVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDS----LLASGSNDKTVTIWDMLAT 192
S D+TV++W V + C L H V C +++ + + L A+GS K
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKS---GKPGP 309
Query: 193 LLASGSNDKTVTIWDM 208
L SGS DKT+ +WD+
Sbjct: 310 FLLSGSRDKTIKMWDV 325
Score = 128 (50.1 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S VT V F+ S++VS S D T+K+WD + +TL+ HT V +F LLA
Sbjct: 107 HRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLA 166
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 167 SCSADMTIKLWD 178
Score = 121 (47.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 114 VGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDS 173
VG H + V V + +VS + DKT+++WD + C KTL +H +VT F
Sbjct: 335 VG-HDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAP 393
Query: 174 LLASGSNDKTVTIWD 188
+ +GS D+TV +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
Score = 113 (44.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
L+SGS DKT+K+WDV C+ TL H +V + S ++DKT+ IWD
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWD 366
Score = 46 (21.3 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 392 APYVVTGSVDQTVKVWECR 410
Score = 43 (20.2 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 194 LASGSNDKTVTIWDMR 209
+ S ++DKT+ IWD +
Sbjct: 353 IVSCADDKTLRIWDYK 368
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 155 (59.6 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 91 VFSTFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
VFS V + V+ G T+ HT +V + F+H LL S S D T+KLWD
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWD 178
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
CI+T+ H V+ + + S S DKT+ +W++
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S VT V F+ S++VS S D T+K+WD + +TL+ HT V +F LLA
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLA 166
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 167 SCSADMTIKLWD 178
Score = 128 (50.1 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 114 VGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDS 173
VG H + V V F+ ++S + DKT+++WD + C+KTL +H +VT F
Sbjct: 335 VG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAP 393
Query: 174 LLASGSNDKTVTIWD 188
+ +GS D+TV +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
Score = 126 (49.4 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ T + T + L+SGS DKT+K+WD+ + C+ TL H +V F
Sbjct: 292 TISEATGSETK-KSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGG 350
Query: 173 SLLASGSNDKTVTIWD 188
+ S ++DKT+ +WD
Sbjct: 351 KFILSCADDKTLRVWD 366
Score = 124 (48.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 54/196 (27%), Positives = 80/196 (40%)
Query: 17 ELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE 76
E L+G H S ++ + F +LLA+ D T+ +W I + H
Sbjct: 143 ERTLKG--HTDS-VQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS-- 197
Query: 77 GWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSG 136
V P V ++ K I V G +T H V VR N +L+ S
Sbjct: 198 ----VAIMPNGDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASC 252
Query: 137 SVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL----ASGSNDKTVTIWDMLAT 192
S D+TV++W V + C L H V C +++ + S A+GS K
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKS---GKPGP 309
Query: 193 LLASGSNDKTVTIWDM 208
L SGS DKT+ +WD+
Sbjct: 310 FLLSGSRDKTIKMWDI 325
Score = 46 (21.3 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 392 APYVVTGSVDQTVKVWECR 410
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 164 (62.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 49/169 (28%), Positives = 80/169 (47%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGR-VPA 83
H G + V+FSP +RLLATGG D V +W ++ DR +G + G + +
Sbjct: 321 HDGE-VNAVQFSPGSRLLATGGMDRRVKLWE------VL--GDRCEPKGSLSGSNAGITS 371
Query: 84 CPLCRTRVFSTFVKQIIPTRVGVYGQDS--ETVGRHTSAVTSVRFNHKSSLLVSGSVDKT 141
+ +R+ + T+ H+ V S +F ++ +VSGS D+T
Sbjct: 372 IEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRT 431
Query: 142 VKLWDVPSLTC-IKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+KLWD+ S C IKT+ + + +C C + + SG DK + WD+
Sbjct: 432 LKLWDLRSKVCNIKTVFAGS---SCNDIVCTEQCVMSGHFDKKIRFWDI 477
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 147 (56.8 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 31/96 (32%), Positives = 49/96 (51%)
Query: 96 VKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKT 155
V + P G G+ ++ H V+ V + +SGS DKT++LWD+ +
Sbjct: 47 VDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQ 106
Query: 156 LESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLA 191
SHT+ V FS D+ + SGS DK++ +W+ LA
Sbjct: 107 FISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLA 142
Score = 127 (49.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 117 HTSAVTSVRFN--HKSSLLVSGSVDKTVKLWDVPSLTCIKTLE-SHTRYVTCCTFSCDDS 173
HT V++VRF+ ++ ++VS DK VK+W++ + +KT HT YV T S D S
Sbjct: 153 HTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCR-LKTNHIGHTGYVNTVTVSPDGS 211
Query: 174 LLASGSNDKTVTIWDM 189
L ASG D +WD+
Sbjct: 212 LCASGGKDGQAMLWDL 227
Score = 110 (43.8 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 113 TVGRHTSAVTSVRF---NHKSSLLVSGSVDKTVKLWDVPSLTCI---------KTLESHT 160
T+ HT VT + N K+++L S S DKT+ +WDV S+ + ++L H
Sbjct: 11 TLEGHTGWVTQIATYTRNDKTTVL-SSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHN 69
Query: 161 RYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+V+ S D SGS DKT+ +WD+
Sbjct: 70 HFVSDVVISSDGQFALSGSWDKTLRLWDL 98
Score = 43 (20.2 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 183 TVTIWDMLATLLASGSNDKTVTIWDM 208
TVT+ +L ASG D +WD+
Sbjct: 203 TVTV-SPDGSLCASGGKDGQAMLWDL 227
Score = 38 (18.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 5 PMGDGPSLFNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
P+ +GP L G H S+ V S D + +G D+T+ +W
Sbjct: 52 PVDEGP--IGRPVRSLTGHNHFVSD---VVISSDGQFALSGSWDKTLRLW 96
Score = 37 (18.1 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 38 DTRLLATGGDDETVTVWRSDDLSLIME 64
D + + D+T+ VW D ++ + E
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDE 55
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 147 (56.8 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 31/96 (32%), Positives = 49/96 (51%)
Query: 96 VKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKT 155
V + P G G+ ++ H V+ V + +SGS DKT++LWD+ +
Sbjct: 47 VDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQ 106
Query: 156 LESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLA 191
SHT+ V FS D+ + SGS DK++ +W+ LA
Sbjct: 107 FISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLA 142
Score = 127 (49.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 117 HTSAVTSVRFN--HKSSLLVSGSVDKTVKLWDVPSLTCIKTLE-SHTRYVTCCTFSCDDS 173
HT V++VRF+ ++ ++VS DK VK+W++ + +KT HT YV T S D S
Sbjct: 153 HTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCR-LKTNHIGHTGYVNTVTVSPDGS 211
Query: 174 LLASGSNDKTVTIWDM 189
L ASG D +WD+
Sbjct: 212 LCASGGKDGQAMLWDL 227
Score = 110 (43.8 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 113 TVGRHTSAVTSVRF---NHKSSLLVSGSVDKTVKLWDVPSLTCI---------KTLESHT 160
T+ HT VT + N K+++L S S DKT+ +WDV S+ + ++L H
Sbjct: 11 TLEGHTGWVTQIATYTRNDKTTVL-SSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHN 69
Query: 161 RYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+V+ S D SGS DKT+ +WD+
Sbjct: 70 HFVSDVVISSDGQFALSGSWDKTLRLWDL 98
Score = 43 (20.2 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 183 TVTIWDMLATLLASGSNDKTVTIWDM 208
TVT+ +L ASG D +WD+
Sbjct: 203 TVTV-SPDGSLCASGGKDGQAMLWDL 227
Score = 38 (18.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 5 PMGDGPSLFNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
P+ +GP L G H S+ V S D + +G D+T+ +W
Sbjct: 52 PVDEGP--IGRPVRSLTGHNHFVSD---VVISSDGQFALSGSWDKTLRLW 96
Score = 37 (18.1 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 38 DTRLLATGGDDETVTVWRSDDLSLIME 64
D + + D+T+ VW D ++ + E
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDE 55
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 130 (50.8 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 31/91 (34%), Positives = 51/91 (56%)
Query: 102 TRVGVYGQDSETVGRHTSAVTSVRFNHKSS-LLVSGSVDKTVKLWDVPSLTC-IKTLESH 159
TR + S +V HT+ V + FN S +L +GS DKTV LWD+ +L + + ESH
Sbjct: 5 TRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH 64
Query: 160 TRYVTCCTFSC-DDSLLASGSNDKTVTIWDM 189
+ +S ++++LAS D+ + +WD+
Sbjct: 65 KDEIFQVQWSPHNETILASSGTDRRLNVWDL 95
Score = 38 (18.4 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 193 LLASGSNDKTVTIWDMRGNLSVD 215
++ S S D + +W M N+ D
Sbjct: 137 VICSVSEDNIMQVWQMAENIYND 159
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 166 (63.5 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 54/192 (28%), Positives = 88/192 (45%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT-RVFS 93
FS D + +A+ G D+T+ V++++ ++E + H V C R +
Sbjct: 359 FSEDGQRIASCGADKTLQVFKAETGEKLLEI--KAHED-------EVLCCAFSADDRFIA 409
Query: 94 TF-VKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSS--LLVSGSVDKTVKLWDVPSL 150
T V + + V G+ ++ H+ V F + S+ LL +GS D +KLWD+
Sbjct: 410 TCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQK 469
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIWDMRG 210
C T+ HT V+ C FS DD LLAS S D T+ +WD+ + N K +
Sbjct: 470 ECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEES 529
Query: 211 NLSVDVPLNYCC 222
++V + CC
Sbjct: 530 QEDMEVMVK-CC 540
Score = 124 (48.7 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 38/162 (23%), Positives = 73/162 (45%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLC 87
+ +R ++F+ D + + + DD + VW + + + H Q ++ + R+ L
Sbjct: 749 NTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETV---SLQAH-QETVKDF-RL----LK 799
Query: 88 RTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV 147
+R+ S + + G+ + H V S + ++ S S DKT K+W
Sbjct: 800 NSRLLSWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSF 859
Query: 148 PSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
L+ + L H V C FS D +LLA+G ++ + IW++
Sbjct: 860 DLLSPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNV 901
Score = 115 (45.5 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
HT AV F+ + S DKT++++ + + +++H V CC FS DD +A
Sbjct: 350 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRFIA 409
Query: 177 SGSNDKTVTIWD 188
+ S DK V IW+
Sbjct: 410 TCSVDKKVKIWN 421
Score = 42 (19.8 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 191 ATLLASGSNDKTVTIW 206
AT +S S DKT IW
Sbjct: 842 ATKFSSTSADKTAKIW 857
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 164 (62.8 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 57/191 (29%), Positives = 87/191 (45%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG----RIEGWGR 80
H G RC F+P+ LL + +D T+ +W S ++ RGH R G
Sbjct: 449 HTGPVYRCA-FAPEMNLLLSCSEDSTIRLWSLLTWSCVVTY--RGHVYPVWDVRFAPHGY 505
Query: 81 V-PACPLCRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSV 138
+C +T R+++T Q + VG H S V V+F+ S+ + +GS
Sbjct: 506 YFVSCSYDKTARLWATDSNQALRVFVG-----------HLSDVDCVQFHPNSNYVATGSS 554
Query: 139 DKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM-----LATL 193
D+TV+LWD + ++ + H V+ FS LASGS D + IWD+ + TL
Sbjct: 555 DRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTL 614
Query: 194 LASGSNDKTVT 204
L S T+T
Sbjct: 615 LRHTSTVTTIT 625
Score = 145 (56.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
GQ + H +V+S+ F+ L SGSVD + +WD+ + + + TL HT VT T
Sbjct: 566 GQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTIT 625
Query: 168 FSCDDSLLASGSNDKTVTIWD 188
FS D ++LA+ D +T+WD
Sbjct: 626 FSRDGTVLAAAGLDNNLTLWD 646
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 37/127 (29%), Positives = 62/127 (48%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC 84
H+ S++ CV+F P++ +ATG D TV +W D+++ GH +G + AC
Sbjct: 533 HL-SDVDCVQFHPNSNYVATGSSDRTVRLW--DNMTGQSVRLMTGH-KGSVSSLA-FSAC 587
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKL 144
R + II + G T+ RHTS VT++ F+ ++L + +D + L
Sbjct: 588 G--RYLASGSVDHNIIIWDLS-NGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTL 644
Query: 145 WDVPSLT 151
WD +T
Sbjct: 645 WDFHKVT 651
Score = 102 (41.0 bits), Expect = 9.8e-06, Sum P(3) = 9.8e-06
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G+ + ++ HT V F + +LL+S S D T++LW + + +C+ T H V
Sbjct: 440 GEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVR 499
Query: 168 FSCDDSLLASGSNDKTVTIW 187
F+ S S DKT +W
Sbjct: 500 FAPHGYYFVSCSYDKTARLW 519
Score = 53 (23.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
C S D+ +LA G D +V +W
Sbjct: 382 CAEISDDSTMLACGFGDSSVRIW 404
Score = 53 (23.7 bits), Expect = 9.8e-06, Sum P(3) = 9.8e-06
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 194 LASGSNDKTVTIWD-MRG 210
+A+GS+D+TV +WD M G
Sbjct: 549 VATGSSDRTVRLWDNMTG 566
Score = 51 (23.0 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 194 LASGSNDKTVTIWDM-RGNL 212
LASGS D + IWD+ G+L
Sbjct: 591 LASGSVDHNIIIWDLSNGSL 610
>TAIR|locus:2165700 [details] [associations]
symbol:AT5G42010 "AT5G42010" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB017067 HSSP:P16649 UniGene:At.30194 HOGENOM:HOG000239143
ProtClustDB:CLSN2679320 IPI:IPI00537904 RefSeq:NP_199016.1
ProteinModelPortal:Q9FHY2 SMR:Q9FHY2 STRING:Q9FHY2
EnsemblPlants:AT5G42010.1 GeneID:834206 KEGG:ath:AT5G42010
TAIR:At5g42010 InParanoid:Q9FHY2 OMA:SESTCAV PhylomeDB:Q9FHY2
Genevestigator:Q9FHY2 Uniprot:Q9FHY2
Length = 709
Score = 164 (62.8 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 59/186 (31%), Positives = 88/186 (47%)
Query: 23 SVHIGSNMRCVRFSPDTRLLATGGDDETVTVWR---------------SDDLSLIMETND 67
S H GS + ++FS D + LA+ G+D V VW SD + ND
Sbjct: 254 SAHDGSIV-VMKFSHDGKYLASAGEDCVVRVWNIIEDERRDNEFEVAESDSSCVYFGMND 312
Query: 68 RGHTQG-RIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGR-HTSAVTSVR 125
+ + + E + L R + ST ++P++V + + R HT + +
Sbjct: 313 KSQIEPLKTENEKIEKSRGLLRKKSESTCA--VLPSKVFSISETPQHEFRGHTGEILDLS 370
Query: 126 FNHKSSLLVSGSVDKTVKLWDVPSLT-CIKTLESHTRYVTCCTFS-CDDSLLASGSNDKT 183
++ K LL S SVD+TV+LW V S CI+ SH +VTC F+ DD+ SGS D
Sbjct: 371 WSEKGFLL-SSSVDETVRLWRVGSSDECIRVF-SHKSFVTCVAFNPVDDNYFISGSIDGK 428
Query: 184 VTIWDM 189
V IWD+
Sbjct: 429 VRIWDV 434
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 141 (54.7 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V+SV +VS S DKT+K+W+V + C+KT H +V + D
Sbjct: 19 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 78
Query: 173 SLLASGSNDKTVTIWDMLAT 192
+L+AS SND+TV +W ++AT
Sbjct: 79 TLIASCSNDQTVRVW-VVAT 97
Score = 132 (51.5 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 28/85 (32%), Positives = 45/85 (52%)
Query: 107 YGQDSETVGR---HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
Y SE G H + V V F+ ++S + DKT+++WD + C+KTL +H +V
Sbjct: 122 YSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV 181
Query: 164 TCCTFSCDDSLLASGSNDKTVTIWD 188
T F + +GS D+TV +W+
Sbjct: 182 TSLDFHKTAPYVVTGSVDQTVKVWE 206
Score = 106 (42.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 137 SVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S D T+KLWD CI+T+ H V+ + + S S DKT+ +W++
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 53
Score = 104 (41.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 112 ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD 171
+T H V VR N +L+ S S D+TV++W V + C L H V C +++ +
Sbjct: 60 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 119
Query: 172 DSLL----ASGS---NDKTV--TIWDMLATLLASGSNDKTVTIWDMR 209
S A+GS +D V ++ + S ++DKT+ +WD +
Sbjct: 120 SSYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 166
Score = 53 (23.7 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+R VR + D L+A+ +D+TV VW
Sbjct: 69 VRMVRPNQDGTLIASCSNDQTVRVW 93
Score = 46 (21.3 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
A + +GS D+TV +W+ R
Sbjct: 190 APYVVTGSVDQTVKVWECR 208
Score = 41 (19.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 13 FNGTELI--LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
F G E I + G H N+ V P+ + + D+T+ +W
Sbjct: 11 FQGFECIRTMHGHDH---NVSSVAIMPNGDHIVSASRDKTIKMW 51
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 155 (59.6 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 45/175 (25%), Positives = 78/175 (44%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVW--RSDDLSLIMETNDRGHTQGRIEGWGRVP 82
H +NM C FSPD+ ++A G + + +W ++D SL T+ + G +
Sbjct: 322 HTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVED-SDGSVRLLSH-- 378
Query: 83 ACPLCRTRVFSTFVKQIIP----TRVGVYGQDSETV----GRHTSAVTSVRFNHKSSLLV 134
+ P+ T FS K ++ ++ D++T HT V V F
Sbjct: 379 SGPVYGT-TFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFA 437
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+ S D+T +LW + ++ H V C TF + + + +GS+DKT +WD+
Sbjct: 438 TASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDV 492
Score = 124 (48.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S V V F+ S+ +++GS DKT +LWDV ++ HT+ VT + D +A
Sbjct: 462 HLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMA 521
Query: 177 SGSNDKTVTIWDMLATLLASGSNDKTVTIWDMRGNL 212
S ++ + +WD+ G+ + T+ RGN+
Sbjct: 522 SADSEGLIHLWDI-------GTGRRIKTMRGHRGNI 550
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 25/85 (29%), Positives = 39/85 (45%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G HT VT+V + S + + LWD+ + IKT+ H + +
Sbjct: 495 GHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLS 554
Query: 168 FSCDDSLLASGSNDKTVTIWDMLAT 192
FS + ++L SG +D TV WD+ T
Sbjct: 555 FSRESTVLVSGGSDCTVRAWDVFKT 579
Score = 50 (22.7 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 191 ATLLASGSNDKTVTIWDM 208
+T+L SG +D TV WD+
Sbjct: 559 STVLVSGGSDCTVRAWDV 576
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 166 (63.5 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 54/192 (28%), Positives = 88/192 (45%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT-RVFS 93
FS D + +A+ G D+T+ V++++ ++E + H V C R +
Sbjct: 623 FSEDGQRIASCGADKTLQVFKAETGEKLLEI--KAHED-------EVLCCAFSADDRFIA 673
Query: 94 TF-VKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSS--LLVSGSVDKTVKLWDVPSL 150
T V + + V G+ ++ H+ V F + S+ LL +GS D +KLWD+
Sbjct: 674 TCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQK 733
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIWDMRG 210
C T+ HT V+ C FS DD LLAS S D T+ +WD+ + N K +
Sbjct: 734 ECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEES 793
Query: 211 NLSVDVPLNYCC 222
++V + CC
Sbjct: 794 QEDMEVMVK-CC 804
Score = 124 (48.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 38/162 (23%), Positives = 73/162 (45%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLC 87
+ +R ++F+ D + + + DD + VW + + + H Q ++ + R+ L
Sbjct: 1004 NTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETV---SLQAH-QETVKDF-RL----LK 1054
Query: 88 RTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV 147
+R+ S + + G+ + H V S + ++ S S DKT K+W
Sbjct: 1055 NSRLLSWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSF 1114
Query: 148 PSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
L+ + L H V C FS D +LLA+G ++ + IW++
Sbjct: 1115 DLLSPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNV 1156
Score = 115 (45.5 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
HT AV F+ + S DKT++++ + + +++H V CC FS DD +A
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRFIA 673
Query: 177 SGSNDKTVTIWD 188
+ S DK V IW+
Sbjct: 674 TCSVDKKVKIWN 685
Score = 42 (19.8 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 191 ATLLASGSNDKTVTIW 206
AT +S S DKT IW
Sbjct: 1097 ATKFSSTSADKTAKIW 1112
>CGD|CAL0003838 [details] [associations]
symbol:orf19.7235 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0035690 "cellular response to drug" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003838 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690 EMBL:AACQ01000092
RefSeq:XP_715035.1 ProteinModelPortal:Q59ZV6 GeneID:3643307
KEGG:cal:CaO19.7235 Uniprot:Q59ZV6
Length = 892
Score = 164 (62.8 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 57/172 (33%), Positives = 81/172 (47%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLI-METNDRGHTQGRIEGWGRVPACPLCRTRV 91
+ FS D + LA G D + +W+ L ME N G+ P R V
Sbjct: 230 MEFSKDGKYLAAAGRDSVIRIWKVISSPLARMEFNQLEKENGQ-------PLRSNKRDSV 282
Query: 92 FST---FVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
F T F +Q P R E G H+S+V S+ ++ K++ L++GS+DKTVKLW V
Sbjct: 283 FDTAPVFHRQ--PVR--------EFRG-HSSSVLSLAWS-KNNFLITGSMDKTVKLWHVD 330
Query: 149 SLTCIKTLESHTRYVTCCTFS-CDDSLLASGSNDKTVTIWDMLATLLASGSN 199
C++T E H +VT F DD SGS D V +W +L ++ N
Sbjct: 331 RDRCLQTFE-HEDFVTSVKFHPSDDRFFLSGSLDNGVRLWSVLENSVSYSKN 381
>UNIPROTKB|Q59ZV6 [details] [associations]
symbol:CaO19.7235 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0035690 "cellular response to drug" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003838 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690 EMBL:AACQ01000092
RefSeq:XP_715035.1 ProteinModelPortal:Q59ZV6 GeneID:3643307
KEGG:cal:CaO19.7235 Uniprot:Q59ZV6
Length = 892
Score = 164 (62.8 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 57/172 (33%), Positives = 81/172 (47%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLI-METNDRGHTQGRIEGWGRVPACPLCRTRV 91
+ FS D + LA G D + +W+ L ME N G+ P R V
Sbjct: 230 MEFSKDGKYLAAAGRDSVIRIWKVISSPLARMEFNQLEKENGQ-------PLRSNKRDSV 282
Query: 92 FST---FVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
F T F +Q P R E G H+S+V S+ ++ K++ L++GS+DKTVKLW V
Sbjct: 283 FDTAPVFHRQ--PVR--------EFRG-HSSSVLSLAWS-KNNFLITGSMDKTVKLWHVD 330
Query: 149 SLTCIKTLESHTRYVTCCTFS-CDDSLLASGSNDKTVTIWDMLATLLASGSN 199
C++T E H +VT F DD SGS D V +W +L ++ N
Sbjct: 331 RDRCLQTFE-HEDFVTSVKFHPSDDRFFLSGSLDNGVRLWSVLENSVSYSKN 381
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 152 (58.6 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 50/173 (28%), Positives = 79/173 (45%)
Query: 23 SVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETND-RGHTQGRIE-GWGR 80
S H + + C FSPD + + G D TV +W D+ T+ +GHT ++ W
Sbjct: 137 SGHTEAVLNCA-FSPDGKGFVSVGGDTTVRIW---DIYTSTPTHTLKGHTNWVLQVAWS- 191
Query: 81 VPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRF-----NHKSSLLVS 135
P T ++ P + G Q T+ HT +T + + N K L S
Sbjct: 192 -PDSKKIATAGMEGDIRIWCP-QTGK--QLGSTLKGHTKFITGLSWEPFHLNPKCVRLAS 247
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
S D T+++WD S + +L HT VTC + + L+ SGS D+TV +++
Sbjct: 248 SSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWG-GEGLIYSGSQDRTVRVFN 299
Score = 137 (53.3 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 49/155 (31%), Positives = 72/155 (46%)
Query: 36 SPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTF 95
S +L +G DD TV +W + ++ + GH Q I V P R ++F
Sbjct: 360 SKGMEILISGSDDFTVIMW-NPSVTKTSISRLTGHQQ-LIN---LVSFSPDGRYFASASF 414
Query: 96 VKQIIPTRVGVYGQDSETVGR---HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
K I ++ GQ + +G H AV V ++ S LVSGS D T+K+WD+ +
Sbjct: 415 DKSI---KLWD-GQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKM 470
Query: 153 IKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
K L H V +S D +ASGS D+ + IW
Sbjct: 471 EKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 30/99 (30%), Positives = 42/99 (42%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + V F+ S S DK++KLWD S + H V +S D L
Sbjct: 393 HQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLV 452
Query: 177 SGSNDKTVTIWDMLATLLAS---GSNDKTVTI-WDMRGN 211
SGS D T+ IWD+ + G D+ T+ W G+
Sbjct: 453 SGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGD 491
Score = 111 (44.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 47/171 (27%), Positives = 78/171 (45%)
Query: 29 NMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR 88
++ C+++ + L+ +G D TV V+ + D L+ + H W
Sbjct: 274 SVTCLKWGGEG-LIYSGSQDRTVRVFNTTDGRLVRVLDGHAH-------W--------VN 317
Query: 89 TRVFSTFVKQIIPTRVGVY---GQDSETVGRHTSAVTSVRFNH---KSS---LLVSGSVD 139
T +T ++ R G Y G++ +T+ V R+N KS +L+SGS D
Sbjct: 318 TLALNT--DYVL--RTGSYDHTGKEYDTL-EEAQRVALERYNDVKAKSKGMEILISGSDD 372
Query: 140 KTVKLWDVPSLT--CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
TV +W+ PS+T I L H + + +FS D AS S DK++ +WD
Sbjct: 373 FTVIMWN-PSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWD 422
Score = 107 (42.7 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 111 SETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSC 170
+ ++ HT AV + F+ VS D TV++WD+ + T TL+ HT +V +S
Sbjct: 133 ASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSP 192
Query: 171 DDSLLASGSNDKTVTIW 187
D +A+ + + IW
Sbjct: 193 DSKKIATAGMEGDIRIW 209
Score = 51 (23.0 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 178 GSNDKTVTI-WDMLATLLASGSNDKTVTIW 206
G D+ T+ W +ASGS D+ + IW
Sbjct: 476 GHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 44 (20.5 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 193 LLASGSNDKTVTIWD 207
+L SGS+D TV +W+
Sbjct: 365 ILISGSDDFTVIMWN 379
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 137 (53.3 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 28/84 (33%), Positives = 44/84 (52%)
Query: 107 YGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCC 166
YG + H+ V+ V + +SGS D T++LWD+ + T + HT+ V
Sbjct: 11 YGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 70
Query: 167 TFSCDDSLLASGSNDKTVTIWDML 190
FS D+ + SGS DKT+ +W+ L
Sbjct: 71 AFSSDNRQIVSGSRDKTIKLWNTL 94
Score = 127 (49.8 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 57/177 (32%), Positives = 82/177 (46%)
Query: 20 LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDR-GHTQGRIEGW 78
LRG H S+ V S D + +G D T+ +W DL+ T GHT+ +
Sbjct: 18 LRGHSHFVSD---VVISSDGQFALSGSWDGTLRLW---DLTTGTTTRRFVGHTKDVLS-- 69
Query: 79 GRVPACPLCRTRVFSTFVKQI-IPTRVGV--YGQDSETVGRHTSAVTSVRFNHKSS--LL 133
V R V + K I + +GV Y E+ H+ V+ VRF+ SS ++
Sbjct: 70 --VAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDES---HSEWVSCVRFSPNSSNPII 124
Query: 134 VSGSVDKTVKLWDVPSLTCIKTLE-SHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
VS DK VK+W++ + +KT HT Y+ T S D SL ASG D +WD+
Sbjct: 125 VSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 180
Score = 43 (20.2 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 183 TVTIWDMLATLLASGSNDKTVTIWDM 208
TVT+ +L ASG D +WD+
Sbjct: 156 TVTV-SPDGSLCASGGKDGQAMLWDL 180
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 149 (57.5 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 44/162 (27%), Positives = 74/162 (45%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLC 87
+ + C++F + +LATG D T+ +W ++ + RGH G +
Sbjct: 350 NGVMCLQF--EDNILATGSYDTTIKIWDTETGEELRTL--RGHESG-------IRCLQFD 398
Query: 88 RTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV 147
T++ S + + I G+ T H V + F+ +S+L SGSVDKTVK+W+
Sbjct: 399 DTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFD--ASILASGSVDKTVKIWNF 456
Query: 148 PSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+ +L HT +V + S S+D TV +WD+
Sbjct: 457 EDKSTF-SLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDL 497
Score = 142 (55.0 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 107 YGQDS-ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTC 165
YG+ S +T HT+ V ++F + ++L +GS D T+K+WD + ++TL H + C
Sbjct: 337 YGRCSIKTFKGHTNGVMCLQF--EDNILATGSYDTTIKIWDTETGEELRTLRGHESGIRC 394
Query: 166 CTFSCDDSLLASGSNDKTVTIWD 188
F DD+ L SGS D+T+ +W+
Sbjct: 395 LQF--DDTKLISGSMDRTIKVWN 415
Score = 122 (48.0 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 50/152 (32%), Positives = 71/152 (46%)
Query: 15 GTEL-ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG 73
G EL LRG H S +RC++F DT+L++ G D T+ VW I + GH +G
Sbjct: 379 GEELRTLRG--H-ESGIRCLQFD-DTKLIS-GSMDRTIKVWNWRTGECI--STYTGH-RG 430
Query: 74 RIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGR--HTSAVTSVRFNHKSS 131
+ G A L V T ++ + +D T HT V +VR + S
Sbjct: 431 GVIGL-HFDASILASGSVDKT-------VKIWNF-EDKSTFSLRGHTDWVNAVRVDTSSR 481
Query: 132 LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
+ S S D TV+LWD+ + TCI+T H V
Sbjct: 482 TVFSASDDCTVRLWDLDTKTCIRTFHGHVGQV 513
Score = 61 (26.5 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 191 ATLLASGSNDKTVTIWD 207
A++LASGS DKTV IW+
Sbjct: 439 ASILASGSVDKTVKIWN 455
Score = 51 (23.0 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 186 IWDMLA-TL-LASGSNDKTVTIWDMR 209
+W + A TL + SG+ D+ + IWD R
Sbjct: 612 VWALGADTLRIVSGAEDRMIKIWDPR 637
Score = 42 (19.8 bits), Expect = 8.3e-09, Sum P(3) = 8.3e-09
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 188 DMLATLLASGSNDKTVTIWDM 208
D + + S S+D TV +WD+
Sbjct: 477 DTSSRTVFSASDDCTVRLWDL 497
Score = 40 (19.1 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 16/71 (22%), Positives = 27/71 (38%)
Query: 15 GTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGR 74
G + IL + ++ C R PD + D+ ++ D L +E+ +G Q
Sbjct: 81 GAQSILPADLSSANSKYCYRHRPDQKCRRQA-DEPSM-----DKLQRELESLPQGDQQSI 134
Query: 75 IEGWGRVPACP 85
W A P
Sbjct: 135 SHVWSLFSAAP 145
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 152 (58.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 50/181 (27%), Positives = 82/181 (45%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGH------TQGRIEGWGRVPACPLCR 88
FSPD L + +D TV +W + ++ +GH TQ G+ V
Sbjct: 552 FSPDRNYLLSSSEDGTVRLWSLQTFTCLV--GYKGHNYPVWDTQFSPYGYYFVSGGHDRV 609
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
R+++T Q P R+ G H + V R++ S+ + +GS D+TV+LWDV
Sbjct: 610 ARLWATDHYQ--PLRI--------FAG-HLADVNCTRYHPNSNYVATGSADRTVRLWDVL 658
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIWDM 208
+ C++ H + TFS + LA+G+ D V +WD+ L+ T T+ +
Sbjct: 659 NGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSL 718
Query: 209 R 209
R
Sbjct: 719 R 719
Score = 128 (50.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + S+ F+ L +G+ D V LWD+ + L+ HT V FS D +LA
Sbjct: 669 HKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILA 728
Query: 177 SGSNDKTVTIWD 188
SGS D TV +WD
Sbjct: 729 SGSMDNTVRLWD 740
Score = 123 (48.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC 84
H+ +++ C R+ P++ +ATG D TV +W D L+ GH +G I +
Sbjct: 627 HL-ADVNCTRYHPNSNYVATGSADRTVRLW--DVLNGNCVRIFTGH-KGPIHS---LTFS 679
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKL 144
P R +++ +G E G HT V S+RF+ +L SGS+D TV+L
Sbjct: 680 PNGRFLATGATDGRVLLWDIGHGLMVGELKG-HTDTVCSLRFSRDGEILASGSMDNTVRL 738
Query: 145 WD 146
WD
Sbjct: 739 WD 740
Score = 97 (39.2 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H+ V F+ + L+S S D TV+LW + + TC+ + H V FS
Sbjct: 543 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFV 602
Query: 177 SGSNDKTVTIW 187
SG +D+ +W
Sbjct: 603 SGGHDRVARLW 613
Score = 55 (24.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 193 LLASGSNDKTVTIWD 207
+LASGS D TV +WD
Sbjct: 726 ILASGSMDNTVRLWD 740
Score = 46 (21.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
+ V + D+ L+A G D TV VW
Sbjct: 474 LTAVDVTDDSSLIAGGFADSTVRVW 498
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 160 (61.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 51/172 (29%), Positives = 79/172 (45%)
Query: 20 LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETN-DRGHTQGRIE-G 77
L+G H ++ V S D + +G D T+ +W D++ + T +GHTQ +
Sbjct: 66 LKGHSHF---VQDVVISHDGQFALSGSWDNTLRLW---DITKGVSTRLFKGHTQDVMSVA 119
Query: 78 WGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGS 137
+ + +R +K + +G E H V+ +RF+ + +VSGS
Sbjct: 120 FSSDNRQIISGSR--DATIK--VWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGS 175
Query: 138 VDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
D VK+WD+ S C TL HT YV T S D SL ASG D +W++
Sbjct: 176 WDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWEL 227
Score = 146 (56.5 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 32/109 (29%), Positives = 53/109 (48%)
Query: 82 PACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKT 141
P + +R + V Q+ PT G+ ++ H+ V V +H +SGS D T
Sbjct: 34 PDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNT 93
Query: 142 VKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML 190
++LWD+ + + HT+ V FS D+ + SGS D T+ +W+ L
Sbjct: 94 LRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTL 142
Score = 111 (44.1 bits), Expect = 0.00048, P = 0.00048
Identities = 40/160 (25%), Positives = 71/160 (44%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRS-DDLSLIMETNDRGHTQGRIEGW-GRVPACPLCRTR 90
V FS D R + +G D T+ VW + + +E H + W + P T
Sbjct: 118 VAFSSDNRQIISGSRDATIKVWNTLGECKFTLE-GPEAH-----QDWVSCIRFSPNTPTI 171
Query: 91 VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSL 150
V ++ ++ + + + + T+ HT V +V + SL SG D LW++ S
Sbjct: 172 VSGSWDNKVKIWDIKSF-KCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSG 230
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML 190
+ LE+ + FS + L++ ++DK + IWD+L
Sbjct: 231 KPLYKLEARNT-INALAFSPNKYWLSAATDDKII-IWDLL 268
Score = 44 (20.5 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 194 LASGSNDKTVTIWDMR 209
+ SGS D V IWD++
Sbjct: 171 IVSGSWDNKVKIWDIK 186
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 153 (58.9 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 52/177 (29%), Positives = 84/177 (47%)
Query: 42 LATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQIIP 101
+ATG D+T +W S + T RGHT I P + T T K +
Sbjct: 150 IATGSFDKTCKLW-SAETGKCYHTF-RGHT-AEIVCLSFNPQSTVVATGSMDTTAK-LWD 205
Query: 102 TRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTR 161
+ G ++ T+ H + + S+ F+ +++GS D TV +WD + + TL H
Sbjct: 206 IQSG---EEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCA 262
Query: 162 YVTCCTFSCDDSLLASGSNDKTVTIWDM-----LATLLASGSNDKTV-TIWDMRGNL 212
++ FS D SL+ +GS DKT +WD +ATL +G +D+ + + +D G L
Sbjct: 263 EISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATL--TGHDDEILDSCFDYTGKL 317
Score = 152 (58.6 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 41/159 (25%), Positives = 73/159 (45%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW----GRVPACPLC--R 88
FS D L+ TG D+T +W + + GH ++ G++ A
Sbjct: 269 FSWDCSLILTGSMDKTCMLWDATSGKCVATLT--GHDDEILDSCFDYTGKLIATASADGT 326
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
RV++ ++ I G H ++ + FN + + L++GS DKT ++WDV
Sbjct: 327 ARVYNATTRKCITKLEG-----------HEGEISKISFNPQGNRLLTGSSDKTARIWDVQ 375
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+ C++ LE HT + C F+ +++ +GS D + IW
Sbjct: 376 TGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 149 (57.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 108 GQDSETVGRHTSAVTSVRFNHK-SSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCC 166
G++ T+ H + V ++ FN+ + +GS DKT KLW + C T HT + C
Sbjct: 124 GEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCL 183
Query: 167 TFSCDDSLLASGSNDKTVTIWDM 189
+F+ +++A+GS D T +WD+
Sbjct: 184 SFNPQSTVVATGSMDTTAKLWDI 206
Score = 124 (48.7 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G+ T+ H + ++S F+ SL+++GS+DKT LWD S C+ TL H +
Sbjct: 251 GRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSC 310
Query: 168 FSCDDSLLASGSNDKTVTIWD 188
F L+A+ S D T +++
Sbjct: 311 FDYTGKLIATASADGTARVYN 331
Score = 117 (46.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD-DSLL 175
H +T+V N S ++GS D+T K+WD S + TLE H V F+ +
Sbjct: 91 HILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI 150
Query: 176 ASGSNDKTVTIW 187
A+GS DKT +W
Sbjct: 151 ATGSFDKTCKLW 162
Score = 116 (45.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 27/111 (24%), Positives = 55/111 (49%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G+ T+ H + F++ L+ + S D T ++++ + CI LE H ++ +
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKIS 352
Query: 168 FSCDDSLLASGSNDKTVTIWDMLA---TLLASGSNDKTVTI-WDMRGNLSV 214
F+ + L +GS+DKT IWD+ + G D+ + ++ +GN+ +
Sbjct: 353 FNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVI 403
Score = 58 (25.5 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
C+ F+P + ++ATG D T +W
Sbjct: 182 CLSFNPQSTVVATGSMDTTAKLW 204
Score = 52 (23.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 191 ATLLASGSNDKTVTIWDMRGNLSV 214
+T++A+GS D T +WD++ V
Sbjct: 189 STVVATGSMDTTAKLWDIQSGEEV 212
Score = 51 (23.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 187 WDMLATLLASGSNDKTVTIWDMRGNLSVDVPLNYC 221
+D + +GS D TV +WD V + +C
Sbjct: 227 FDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHC 261
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 147 (56.8 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 52/175 (29%), Positives = 79/175 (45%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDD---LSLIMETNDRGHTQGRI 75
+L+G H S + V FSPD++ LA+GG D+ VW + L++ GH I
Sbjct: 105 VLKG--HQRS-VETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLV-----GHCDS-I 155
Query: 76 EGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVS 135
+ P T + + V I R + HT ++ + ++ S LL S
Sbjct: 156 QSSDFSPTSDSLATGSWDSTV-HIWDLRASTPVVSYHNLEGHTGNISCLCYS-ASGLLAS 213
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML 190
GS DKT+ +W + L+ HT +V FS D+ LAS +TV +WD L
Sbjct: 214 GSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCL 268
Score = 143 (55.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 50/168 (29%), Positives = 71/168 (42%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC 84
H G + C FSPD R L T DD V VW + L+ GH +G ++ P
Sbjct: 25 HHGE-VNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRL--AGH-RGPVKSCCFSPDG 80
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKL 144
L + ++ R + + H +V +V F+ S L SG DK +
Sbjct: 81 RLIASSSSDHSIRLWDVAR----SKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIV 136
Query: 145 WDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT 192
W+V S + L H + FS LA+GS D TV IWD+ A+
Sbjct: 137 WEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRAS 184
Score = 122 (48.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 45/150 (30%), Positives = 65/150 (43%)
Query: 35 FSPDTRLLATGGDDETVTVWR-SDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTR--- 90
FSP + LATG D TV +W ++ N GHT G I +C LC +
Sbjct: 160 FSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHT-GNI-------SC-LCYSASGL 210
Query: 91 -VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
++ K I + + G HT V S+ F+ L S +TVK+WD +
Sbjct: 211 LASGSWDKTICVWKPTTNNLPLQLKG-HTIWVNSLAFSPDELKLASAGYSRTVKVWDCLT 269
Query: 150 LTCIKTLESHTRYVTCCTFSCDDSLLASGS 179
C++TL+ C F+ D LL SG+
Sbjct: 270 GKCLETLKGMLDVAHACIFTPDGKLLVSGA 299
Score = 111 (44.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 101 PTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHT 160
PTR+ V G+ G+H V F+ L++ S D V +W S + L H
Sbjct: 11 PTRLAV-GR-VRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHR 68
Query: 161 RYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
V C FS D L+AS S+D ++ +WD+
Sbjct: 69 GPVKSCCFSPDGRLIASSSSDHSIRLWDV 97
Score = 59 (25.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 194 LASGSNDKTVTIWDMRGNLSV 214
LA+GS D TV IWD+R + V
Sbjct: 167 LATGSWDSTVHIWDLRASTPV 187
Score = 54 (24.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 10/14 (71%), Positives = 12/14 (85%)
Query: 193 LLASGSNDKTVTIW 206
LLASGS DKT+ +W
Sbjct: 210 LLASGSWDKTICVW 223
Score = 51 (23.0 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYC 221
LASG DK +W+++ V + + +C
Sbjct: 125 LASGGWDKRAIVWEVQSGRRVHLLVGHC 152
Score = 40 (19.1 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 194 LASGSNDKTVTIWD 207
LAS +TV +WD
Sbjct: 253 LASAGYSRTVKVWD 266
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 161 (61.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLC 87
S++ C RFSPD + L TG D + VW + + + Q C +C
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDL--KYQAQDNFMMMDDAVLC-MC 271
Query: 88 RTRVFSTFVKQIIPTRVGVYG-QDSETVGR----HTSAVTSVRFNHKSSLLVSGSVDKTV 142
+R ++ V+ Q + + R H+ VT + F+ SS ++S S D+T+
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 143 KLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT 192
++ + S +K H+ +V TF+ D + S S+D TV IW+M T
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTT 381
Score = 120 (47.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/129 (26%), Positives = 56/129 (43%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR--T 89
C+ FS DT +LATG D + VW+ + +R H++G V + +
Sbjct: 269 CMCFSRDTEMLATGAQDGKIKVWKIQS-GQCLRRFERAHSKG-------VTCLSFSKDSS 320
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
++ S Q I G+ + H+S V F ++S S D TVK+W++ +
Sbjct: 321 QILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKT 380
Query: 150 LTCIKTLES 158
C T +S
Sbjct: 381 TECSNTFKS 389
Score = 36 (17.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 154 KTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+TL H + V +L+A+ S D + +W
Sbjct: 478 RTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 161 (61.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLC 87
S++ C RFSPD + L TG D + VW + + + Q C +C
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDL--KYQAQDNFMMMDDAVLC-MC 271
Query: 88 RTRVFSTFVKQIIPTRVGVYG-QDSETVGR----HTSAVTSVRFNHKSSLLVSGSVDKTV 142
+R ++ V+ Q + + R H+ VT + F+ SS ++S S D+T+
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 143 KLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT 192
++ + S +K H+ +V TF+ D + S S+D TV IW+M T
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTT 381
Score = 120 (47.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/129 (26%), Positives = 56/129 (43%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR--T 89
C+ FS DT +LATG D + VW+ + +R H++G V + +
Sbjct: 269 CMCFSRDTEMLATGAQDGKIKVWKIQS-GQCLRRFERAHSKG-------VTCLSFSKDSS 320
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
++ S Q I G+ + H+S V F ++S S D TVK+W++ +
Sbjct: 321 QILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKT 380
Query: 150 LTCIKTLES 158
C T +S
Sbjct: 381 TECSNTFKS 389
Score = 36 (17.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 154 KTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+TL H + V +L+A+ S D + +W
Sbjct: 478 RTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 161 (61.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLC 87
S++ C RFSPD + L TG D + VW + + + Q C +C
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDL--KYQAQDNFMMMDDAVLC-MC 271
Query: 88 RTRVFSTFVKQIIPTRVGVYG-QDSETVGR----HTSAVTSVRFNHKSSLLVSGSVDKTV 142
+R ++ V+ Q + + R H+ VT + F+ SS ++S S D+T+
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 143 KLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT 192
++ + S +K H+ +V TF+ D + S S+D TV IW+M T
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTT 381
Score = 120 (47.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/129 (26%), Positives = 56/129 (43%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR--T 89
C+ FS DT +LATG D + VW+ + +R H++G V + +
Sbjct: 269 CMCFSRDTEMLATGAQDGKIKVWKIQS-GQCLRRFERAHSKG-------VTCLSFSKDSS 320
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
++ S Q I G+ + H+S V F ++S S D TVK+W++ +
Sbjct: 321 QILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKT 380
Query: 150 LTCIKTLES 158
C T +S
Sbjct: 381 TECSNTFKS 389
Score = 36 (17.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 154 KTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+TL H + V +L+A+ S D + +W
Sbjct: 478 RTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 161 (61.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLC 87
S++ C RFSPD + L TG D + VW + + + Q C +C
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDL--KYQAQDNFMMMDDAVLC-MC 271
Query: 88 RTRVFSTFVKQIIPTRVGVYG-QDSETVGR----HTSAVTSVRFNHKSSLLVSGSVDKTV 142
+R ++ V+ Q + + R H+ VT + F+ SS ++S S D+T+
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 143 KLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT 192
++ + S +K H+ +V TF+ D + S S+D TV IW+M T
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTT 381
Score = 120 (47.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/129 (26%), Positives = 56/129 (43%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR--T 89
C+ FS DT +LATG D + VW+ + +R H++G V + +
Sbjct: 269 CMCFSRDTEMLATGAQDGKIKVWKIQS-GQCLRRFERAHSKG-------VTCLSFSKDSS 320
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
++ S Q I G+ + H+S V F ++S S D TVK+W++ +
Sbjct: 321 QILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKT 380
Query: 150 LTCIKTLES 158
C T +S
Sbjct: 381 TECSNTFKS 389
Score = 36 (17.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 154 KTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+TL H + V +L+A+ S D + +W
Sbjct: 478 RTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 150 (57.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 49/172 (28%), Positives = 80/172 (46%)
Query: 20 LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWG 79
L+G H G+ M + ++ D LL + D+TV VW S+ + +GHT
Sbjct: 95 LKG--HSGAVME-LHYNTDGSLLFSASTDKTVCVWDSETGERVKRL--KGHTSF------ 143
Query: 80 RVPAC-PLCRTRVFSTFVKQIIPTRV-GVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGS 137
V +C P R + ++ + + S ++T V SV FN S ++SG
Sbjct: 144 -VNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSDQIISGG 202
Query: 138 VDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+D +K+WD+ I +++ H VT + S D S L S S D +V +WD+
Sbjct: 203 IDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDI 254
Score = 144 (55.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 34/88 (38%), Positives = 49/88 (55%)
Query: 106 VYG--QDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
VYG ++ T+ H+ AV + +N SLL S S DKTV +WD + +K L+ HT +V
Sbjct: 85 VYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFV 144
Query: 164 TCCTFSC--DDSLLASGSNDKTVTIWDM 189
C F L +GS+D TV +WD+
Sbjct: 145 NSC-FPARRGPQLACTGSDDGTVKLWDI 171
Score = 120 (47.3 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV----PSLTCIKTLESHT----RYVTCCTF 168
H +VT + + S L+S S+D +V++WD+ P C+K + + + + C++
Sbjct: 224 HGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSW 283
Query: 169 SCDDSLLASGSNDKTVTIWD 188
S D S +A+GS D+ V IWD
Sbjct: 284 SADGSKIAAGSADRFVYIWD 303
Score = 105 (42.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V +F+ + L S D+ + +W+V C TL+ H+ V ++ D SL
Sbjct: 55 HEGEVYCCKFHPNGATLASSGYDRLILMWNVYG-DCENYATLKGHSGAVMELHYNTDGSL 113
Query: 175 LASGSNDKTVTIWD 188
L S S DKTV +WD
Sbjct: 114 LFSASTDKTVCVWD 127
Score = 57 (25.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 193 LLASGSNDKTVTIWDMRGNLSV 214
L +GS+D TV +WD+R SV
Sbjct: 156 LACTGSDDGTVKLWDIRKKASV 177
Score = 46 (21.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 194 LASGSNDKTVTIWDMRGN 211
+ SG D + +WD+R N
Sbjct: 198 IISGGIDNDIKVWDLRQN 215
Score = 45 (20.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 194 LASGSNDKTVTIWDMR 209
L S S D +V +WD+R
Sbjct: 240 LLSNSMDNSVRVWDIR 255
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 160 (61.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 113 TVGRHTSAVTSVRFNH-KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD 171
T+ HT ++ + ++ S++L S S D T++LW++ CIK L HT ++T F+
Sbjct: 63 TLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQK 122
Query: 172 DSLLASGSNDKTVTIWDM 189
++L SGS+D+T+TIWD+
Sbjct: 123 GNILISGSSDETITIWDI 140
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 160 (61.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 36/96 (37%), Positives = 61/96 (63%)
Query: 98 QIIPTRVGVYGQDSETV-GRHTSAVTSVRFNHKS-SLLVSGSVDKTVKLWDVPSL-TCIK 154
QI+ TRV + + T G+H A+ ++ FN + ++L +GS DKT+ LWD+ +L T +
Sbjct: 240 QILDTRVAETTRAAATAEGQHRDAINAIAFNPAAETVLATGSADKTIGLWDLRNLKTKLH 299
Query: 155 TLESHTRYVTCCTFS-CDDSLLASGSNDKTVTIWDM 189
TLE+HT VT ++ ++++LAS S D+ + WD+
Sbjct: 300 TLENHTDSVTSISWHPFEEAVLASASYDRKIMFWDL 335
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 137 (53.3 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSC-DDSLL 175
H A+ V+FN SS LVS DKTV++WD+ + +CI+ +SHT V + ++
Sbjct: 78 HKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMI 137
Query: 176 ASGSNDKTVTIWDM 189
S S+D TV + DM
Sbjct: 138 CSASDDGTVMVHDM 151
Score = 107 (42.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 29/104 (27%), Positives = 47/104 (45%)
Query: 88 RTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV 147
R ++ S F++ +P R + + H + + +F+ S L S D+ + LW+V
Sbjct: 8 RNQMASQFLE--LPKRTSSLMAPTMVLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNV 65
Query: 148 PSLTC--IKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
C L+ H + F+ D S L S DKTV +WDM
Sbjct: 66 FG-ECENFAVLKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDM 108
Score = 51 (23.0 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 18 LILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
++L+G H G + +FS D LA+ G D+ + +W
Sbjct: 30 MVLQG--H-GGEIYTSQFSSDGSFLASAGYDQQIFLW 63
Score = 42 (19.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 193 LLASGSNDKTVTIWDMR 209
++ S S+D TV + DMR
Sbjct: 136 MICSASDDGTVMVHDMR 152
Score = 39 (18.8 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 184 VTIWDMLATLLASGSNDKTVTIWDMRGN 211
VT D ++ G D + +WDM N
Sbjct: 169 VTFNDAADNVICGGI-DNQIKVWDMLRN 195
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 159 (61.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 47/162 (29%), Positives = 77/162 (47%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIME-TNDRGHT-QGRIEGWGRVPACPL- 86
+R +FSP+ +L+AT DD++V ++ D + T +R Q WG + A L
Sbjct: 147 VRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALG 206
Query: 87 C-RTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLW 145
C R ++F Q++ V H++ V V F+ L+SGS D+T+++
Sbjct: 207 CNRIKIFDVSGSQLLQLYVV-----------HSAPVNDVAFHPSGHFLLSGSDDRTIRIL 255
Query: 146 DVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
D+ I TL HT V FS D A+G +D+ + +W
Sbjct: 256 DLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVW 297
Score = 151 (58.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 51/178 (28%), Positives = 79/178 (44%)
Query: 12 LFNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHT 71
LF L + H G + +RF PD +AT D TV +W + + + H+
Sbjct: 4 LFRDPALERHFTGHSGGITQ-LRFGPDGAQIATSSTDSTVILWNLNQAARCIRF--ASHS 60
Query: 72 QGRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSS 131
+ G P L + VK P GV G E V H+ AV SV F+
Sbjct: 61 -APVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSG---EFVA-HSKAVRSVDFDSTGH 115
Query: 132 LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
L+++ S DK+ K+W V + + +V FS + L+A+ S+DK+V I+D+
Sbjct: 116 LMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDV 173
Score = 43 (20.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 194 LASGSNDKTVTIWDM 208
L SGS+D+T+ I D+
Sbjct: 243 LLSGSDDRTIRILDL 257
Score = 43 (20.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 193 LLASGSNDKTVTIWDM 208
L+A+ S+DK+V I+D+
Sbjct: 158 LVATASDDKSVRIYDV 173
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 160 (61.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 63/230 (27%), Positives = 102/230 (44%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW---RSDDLSLIMETNDRG-HTQGR 74
+L G H GS + C+++ D R++ TG D TV VW + L+ ++ N+ H R
Sbjct: 226 VLTG--HTGSVL-CLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL--R 278
Query: 75 IEGWGRVPACPLCRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL 133
G + C R+ V+ I R + G H +AV V F+ K +
Sbjct: 279 FSN-GLMVTCSKDRSIAVWDMASATDITLRRVLVG--------HRAAVNVVDFDDK--YI 327
Query: 134 VSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM---- 189
VS S D+T+K+W + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 328 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA 385
Query: 190 -LATL----------------LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
L L + SG+ D + +WD++ L P + C
Sbjct: 386 CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 435
Score = 135 (52.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
++SG D ++K+WD SL C+K L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 204 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDV 258
Score = 125 (49.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 51/187 (27%), Positives = 79/187 (42%)
Query: 14 NGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG 73
+ T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 300 SATDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN--GHKRG 356
Query: 74 RIEGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSL 132
AC R R V S I G + H V +RF++K
Sbjct: 357 I--------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR-- 406
Query: 133 LVSGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKT 183
+VSG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T
Sbjct: 407 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDT 464
Query: 184 VTIWDML 190
+ IWD L
Sbjct: 465 ILIWDFL 471
Score = 43 (20.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 194 LASGSNDKTVTIWD 207
+ S S+D T+ IWD
Sbjct: 456 IISSSHDDTILIWD 469
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 161 (61.7 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 56/203 (27%), Positives = 84/203 (41%)
Query: 30 MRCVRFS-PDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR 88
+ C++ +R+L TGG+D V +W + I+ GH+ G I+ + L
Sbjct: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY--GHSSG-IDSVTFDASEVLVA 75
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP 148
S +K + T+ H S SV F+ SGS+D +K+WD+
Sbjct: 76 AGAASGTIKLWDLEEAKIV----RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
Query: 149 SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT---------------- 192
CI T + HTR V F+ D + SG D V +WD+ A
Sbjct: 132 KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSL 191
Query: 193 -------LLASGSNDKTVTIWDM 208
LLA+GS D+TV WD+
Sbjct: 192 DFHPHEFLLATGSADRTVKFWDL 214
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/175 (26%), Positives = 72/175 (41%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLC 87
S + V F L+A G T+ +W ++ ++ GH I V P
Sbjct: 60 SGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLT--GHRSNCIS----VDFHPFG 113
Query: 88 RTRVFSTFVKQIIPTRVGVYGQDSE----TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVK 143
F F + T + ++ + T HT V +RF +VSG D VK
Sbjct: 114 E---F--FASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVK 168
Query: 144 LWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLA-TLLASG 197
+WD+ + + +SH + F + LLA+GS D+TV WD+ L+ SG
Sbjct: 169 VWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSG 223
Score = 119 (46.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 117 HTSAVTSVRFNHKSS-LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL 175
H++AV ++ KSS +LV+G D V LW + I +L H+ + TF + L+
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 176 ASGSNDKTVTIWDM 189
A+G+ T+ +WD+
Sbjct: 75 AAGAASGTIKLWDL 88
Score = 47 (21.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 195 ASGSNDKTVTIWDMR 209
ASGS D + IWD+R
Sbjct: 117 ASGSLDTNLKIWDIR 131
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 160 (61.4 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 63/230 (27%), Positives = 102/230 (44%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW---RSDDLSLIMETNDRG-HTQGR 74
+L G H GS + C+++ D R++ TG D TV VW + L+ ++ N+ H R
Sbjct: 243 VLTG--HTGSVL-CLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL--R 295
Query: 75 IEGWGRVPACPLCRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL 133
G + C R+ V+ I R + G H +AV V F+ K +
Sbjct: 296 FSN-GLMVTCSKDRSIAVWDMASATDITLRRVLVG--------HRAAVNVVDFDDK--YI 344
Query: 134 VSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM---- 189
VS S D+T+K+W + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 345 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA 402
Query: 190 -LATL----------------LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
L L + SG+ D + +WD++ L P + C
Sbjct: 403 CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 452
Score = 135 (52.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
++SG D ++K+WD SL C+K L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 221 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDV 275
Score = 125 (49.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 51/187 (27%), Positives = 79/187 (42%)
Query: 14 NGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG 73
+ T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 317 SATDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN--GHKRG 373
Query: 74 RIEGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSL 132
AC R R V S I G + H V +RF++K
Sbjct: 374 I--------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR-- 423
Query: 133 LVSGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKT 183
+VSG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T
Sbjct: 424 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDT 481
Query: 184 VTIWDML 190
+ IWD L
Sbjct: 482 ILIWDFL 488
Score = 43 (20.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 194 LASGSNDKTVTIWD 207
+ S S+D T+ IWD
Sbjct: 473 IISSSHDDTILIWD 486
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 160 (61.4 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 63/230 (27%), Positives = 102/230 (44%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW---RSDDLSLIMETNDRG-HTQGR 74
+L G H GS + C+++ D R++ TG D TV VW + L+ ++ N+ H R
Sbjct: 243 VLTG--HTGSVL-CLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL--R 295
Query: 75 IEGWGRVPACPLCRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL 133
G + C R+ V+ I R + G H +AV V F+ K +
Sbjct: 296 FSN-GLMVTCSKDRSIAVWDMASATDITLRRVLVG--------HRAAVNVVDFDDK--YI 344
Query: 134 VSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM---- 189
VS S D+T+K+W + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 345 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA 402
Query: 190 -LATL----------------LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
L L + SG+ D + +WD++ L P + C
Sbjct: 403 CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 452
Score = 135 (52.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
++SG D ++K+WD SL C+K L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 221 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDV 275
Score = 125 (49.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 51/187 (27%), Positives = 79/187 (42%)
Query: 14 NGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG 73
+ T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 317 SATDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN--GHKRG 373
Query: 74 RIEGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSL 132
AC R R V S I G + H V +RF++K
Sbjct: 374 I--------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR-- 423
Query: 133 LVSGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKT 183
+VSG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T
Sbjct: 424 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDT 481
Query: 184 VTIWDML 190
+ IWD L
Sbjct: 482 ILIWDFL 488
Score = 43 (20.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 194 LASGSNDKTVTIWD 207
+ S S+D T+ IWD
Sbjct: 473 IISSSHDDTILIWD 486
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 130 (50.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 31/91 (34%), Positives = 51/91 (56%)
Query: 102 TRVGVYGQDSETVGRHTSAVTSVRFNHKSS-LLVSGSVDKTVKLWDVPSLTC-IKTLESH 159
TR + S +V HT+ V + FN S +L +GS DKTV LWD+ +L + + ESH
Sbjct: 12 TRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH 71
Query: 160 TRYVTCCTFSC-DDSLLASGSNDKTVTIWDM 189
+ +S ++++LAS D+ + +WD+
Sbjct: 72 KDEIFQVQWSPHNETILASSGTDRRLNVWDL 102
Score = 38 (18.4 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 193 LLASGSNDKTVTIWDMRGNLSVD 215
++ S S D + +W M N+ D
Sbjct: 144 VICSVSEDNIMQVWQMAENIYND 166
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 160 (61.4 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 63/230 (27%), Positives = 102/230 (44%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW---RSDDLSLIMETNDRG-HTQGR 74
+L G H GS + C+++ D R++ TG D TV VW + L+ ++ N+ H R
Sbjct: 260 VLTG--HTGSVL-CLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL--R 312
Query: 75 IEGWGRVPACPLCRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL 133
G + C R+ V+ I R + G H +AV V F+ K +
Sbjct: 313 FSN-GLMVTCSKDRSIAVWDMASATDITLRRVLVG--------HRAAVNVVDFDDK--YI 361
Query: 134 VSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM---- 189
VS S D+T+K+W + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 362 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA 419
Query: 190 -LATL----------------LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
L L + SG+ D + +WD++ L P + C
Sbjct: 420 CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 469
Score = 135 (52.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
++SG D ++K+WD SL C+K L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 238 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDV 292
Score = 125 (49.1 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 51/187 (27%), Positives = 79/187 (42%)
Query: 14 NGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG 73
+ T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 334 SATDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN--GHKRG 390
Query: 74 RIEGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSL 132
AC R R V S I G + H V +RF++K
Sbjct: 391 I--------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR-- 440
Query: 133 LVSGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKT 183
+VSG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T
Sbjct: 441 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDT 498
Query: 184 VTIWDML 190
+ IWD L
Sbjct: 499 ILIWDFL 505
Score = 43 (20.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 194 LASGSNDKTVTIWD 207
+ S S+D T+ IWD
Sbjct: 490 IISSSHDDTILIWD 503
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 160 (61.4 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 63/230 (27%), Positives = 102/230 (44%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW---RSDDLSLIMETNDRG-HTQGR 74
+L G H GS + C+++ D R++ TG D TV VW + L+ ++ N+ H R
Sbjct: 262 VLTG--HTGSVL-CLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL--R 314
Query: 75 IEGWGRVPACPLCRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL 133
G + C R+ V+ I R + G H +AV V F+ K +
Sbjct: 315 FSN-GLMVTCSKDRSIAVWDMASATDITLRRVLVG--------HRAAVNVVDFDDK--YI 363
Query: 134 VSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM---- 189
VS S D+T+K+W + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 364 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA 421
Query: 190 -LATL----------------LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
L L + SG+ D + +WD++ L P + C
Sbjct: 422 CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 471
Score = 135 (52.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
++SG D ++K+WD SL C+K L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 240 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDV 294
Score = 125 (49.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 51/187 (27%), Positives = 79/187 (42%)
Query: 14 NGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG 73
+ T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 336 SATDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN--GHKRG 392
Query: 74 RIEGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSL 132
AC R R V S I G + H V +RF++K
Sbjct: 393 I--------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR-- 442
Query: 133 LVSGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKT 183
+VSG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T
Sbjct: 443 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDT 500
Query: 184 VTIWDML 190
+ IWD L
Sbjct: 501 ILIWDFL 507
Score = 43 (20.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 194 LASGSNDKTVTIWD 207
+ S S+D T+ IWD
Sbjct: 492 IISSSHDDTILIWD 505
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 160 (61.4 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 63/230 (27%), Positives = 102/230 (44%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW---RSDDLSLIMETNDRG-HTQGR 74
+L G H GS + C+++ D R++ TG D TV VW + L+ ++ N+ H R
Sbjct: 263 VLTG--HTGSVL-CLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL--R 315
Query: 75 IEGWGRVPACPLCRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL 133
G + C R+ V+ I R + G H +AV V F+ K +
Sbjct: 316 FSN-GLMVTCSKDRSIAVWDMASATDITLRRVLVG--------HRAAVNVVDFDDK--YI 364
Query: 134 VSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM---- 189
VS S D+T+K+W + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 365 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA 422
Query: 190 -LATL----------------LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
L L + SG+ D + +WD++ L P + C
Sbjct: 423 CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 472
Score = 135 (52.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
++SG D ++K+WD SL C+K L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 241 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDV 295
Score = 125 (49.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 51/187 (27%), Positives = 79/187 (42%)
Query: 14 NGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG 73
+ T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 337 SATDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN--GHKRG 393
Query: 74 RIEGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSL 132
AC R R V S I G + H V +RF++K
Sbjct: 394 I--------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR-- 443
Query: 133 LVSGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKT 183
+VSG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T
Sbjct: 444 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDT 501
Query: 184 VTIWDML 190
+ IWD L
Sbjct: 502 ILIWDFL 508
Score = 43 (20.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 194 LASGSNDKTVTIWD 207
+ S S+D T+ IWD
Sbjct: 493 IISSSHDDTILIWD 506
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 149 (57.5 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 49/165 (29%), Positives = 78/165 (47%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLC 87
+ + C+ +SPD+ LATG DD+ + +W D + T + H G +G
Sbjct: 223 AGVSCLAWSPDSGTLATGSDDKAIRLW--DRI-----TAEPAHAVGTQDGDDDAERG--- 272
Query: 88 RTRVFSTFVKQIIPTRVGVYGQDSETVGR----HTSAVTSVRFNHKSSLLVSGSVDKTVK 143
RT T + VG G + R H + V + F+ K ++L SGS D+ V
Sbjct: 273 RTHG-GTRISGASGIGVGGGGGPARGTRRPLLGHHNYVYCLAFSPKGNILASGSYDEAVF 331
Query: 144 LWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
LWDV + +++L +H+ V+ F D +L+ S S D + IWD
Sbjct: 332 LWDVRAGRLMRSLPAHSDPVSGIDFCRDGTLVVSCSTDGLIRIWD 376
Score = 143 (55.4 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 32/91 (35%), Positives = 47/91 (51%)
Query: 101 PTRVGV-YGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESH 159
P RV V Y + E G H+ + VR + + S S D T ++WD + I TL H
Sbjct: 163 PERVQVRYKRRLELRG-HSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGH 221
Query: 160 TRYVTCCTFSCDDSLLASGSNDKTVTIWDML 190
V+C +S D LA+GS+DK + +WD +
Sbjct: 222 MAGVSCLAWSPDSGTLATGSDDKAIRLWDRI 252
Score = 61 (26.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 193 LLASGSNDKTVTIWDMR-GNLSVDVP 217
+LASGS D+ V +WD+R G L +P
Sbjct: 320 ILASGSYDEAVFLWDVRAGRLMRSLP 345
Score = 41 (19.5 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 192 TLLASGSNDKTVTIWD 207
TL+ S S D + IWD
Sbjct: 361 TLVVSCSTDGLIRIWD 376
Score = 40 (19.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 194 LASGSNDKTVTIWDMR 209
+AS S D + +WD++
Sbjct: 489 VASASEDGHIVLWDVK 504
Score = 39 (18.8 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 173 SLLASGSNDKTVTIWDM 189
+ +AS S D + +WD+
Sbjct: 487 AFVASASEDGHIVLWDV 503
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 160 (61.4 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 63/230 (27%), Positives = 102/230 (44%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW---RSDDLSLIMETNDRG-HTQGR 74
+L G H GS + C+++ D R++ TG D TV VW + L+ ++ N+ H R
Sbjct: 275 VLTG--HTGSVL-CLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL--R 327
Query: 75 IEGWGRVPACPLCRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL 133
G + C R+ V+ I R + G H +AV V F+ K +
Sbjct: 328 FSN-GLMVTCSKDRSIAVWDMASATDITLRRVLVG--------HRAAVNVVDFDDK--YI 376
Query: 134 VSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM---- 189
VS S D+T+K+W + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 377 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA 434
Query: 190 -LATL----------------LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
L L + SG+ D + +WD++ L P + C
Sbjct: 435 CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 484
Score = 135 (52.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
++SG D ++K+WD SL C+K L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDV 307
Score = 125 (49.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 51/187 (27%), Positives = 79/187 (42%)
Query: 14 NGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG 73
+ T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 349 SATDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN--GHKRG 405
Query: 74 RIEGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSL 132
AC R R V S I G + H V +RF++K
Sbjct: 406 I--------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR-- 455
Query: 133 LVSGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKT 183
+VSG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T
Sbjct: 456 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDT 513
Query: 184 VTIWDML 190
+ IWD L
Sbjct: 514 ILIWDFL 520
Score = 43 (20.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 194 LASGSNDKTVTIWD 207
+ S S+D T+ IWD
Sbjct: 505 IISSSHDDTILIWD 518
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 160 (61.4 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 63/230 (27%), Positives = 102/230 (44%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW---RSDDLSLIMETNDRG-HTQGR 74
+L G H GS + C+++ D R++ TG D TV VW + L+ ++ N+ H R
Sbjct: 275 VLTG--HTGSVL-CLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL--R 327
Query: 75 IEGWGRVPACPLCRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL 133
G + C R+ V+ I R + G H +AV V F+ K +
Sbjct: 328 FSN-GLMVTCSKDRSIAVWDMASATDITLRRVLVG--------HRAAVNVVDFDDK--YI 376
Query: 134 VSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM---- 189
VS S D+T+K+W + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 377 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA 434
Query: 190 -LATL----------------LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
L L + SG+ D + +WD++ L P + C
Sbjct: 435 CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 484
Score = 135 (52.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
++SG D ++K+WD SL C+K L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDV 307
Score = 125 (49.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 51/187 (27%), Positives = 79/187 (42%)
Query: 14 NGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG 73
+ T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 349 SATDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN--GHKRG 405
Query: 74 RIEGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSL 132
AC R R V S I G + H V +RF++K
Sbjct: 406 I--------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR-- 455
Query: 133 LVSGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKT 183
+VSG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T
Sbjct: 456 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDT 513
Query: 184 VTIWDML 190
+ IWD L
Sbjct: 514 ILIWDFL 520
Score = 43 (20.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 194 LASGSNDKTVTIWD 207
+ S S+D T+ IWD
Sbjct: 505 IISSSHDDTILIWD 518
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 160 (61.4 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 63/230 (27%), Positives = 102/230 (44%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW---RSDDLSLIMETNDRG-HTQGR 74
+L G H GS + C+++ D R++ TG D TV VW + L+ ++ N+ H R
Sbjct: 275 VLTG--HTGSVL-CLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHL--R 327
Query: 75 IEGWGRVPACPLCRT-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL 133
G + C R+ V+ I R + G H +AV V F+ K +
Sbjct: 328 FSN-GLMVTCSKDRSIAVWDMASATDITLRRVLVG--------HRAAVNVVDFDDK--YI 376
Query: 134 VSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM---- 189
VS S D+T+K+W + ++TL H R + C + D L+ SGS+D T+ +WD+
Sbjct: 377 VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA 434
Query: 190 -LATL----------------LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
L L + SG+ D + +WD++ L P + C
Sbjct: 435 CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 484
Score = 135 (52.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
++SG D ++K+WD SL C+K L HT V C + D+ ++ +GS+D TV +WD+
Sbjct: 253 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWDV 307
Score = 125 (49.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 51/187 (27%), Positives = 79/187 (42%)
Query: 14 NGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG 73
+ T++ LR V +G D + + + D T+ VW + + N GH +G
Sbjct: 349 SATDITLR-RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN--GHKRG 405
Query: 74 RIEGWGRVPACPLCRTR-VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSL 132
AC R R V S I G + H V +RF++K
Sbjct: 406 I--------ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR-- 455
Query: 133 LVSGSVDKTVKLWDV--------PSLT-CIKTLESHTRYVTCCTFSCDDSLLASGSNDKT 183
+VSG+ D +K+WD+ P+ T C++TL H+ V F D+ + S S+D T
Sbjct: 456 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDT 513
Query: 184 VTIWDML 190
+ IWD L
Sbjct: 514 ILIWDFL 520
Score = 43 (20.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 194 LASGSNDKTVTIWD 207
+ S S+D T+ IWD
Sbjct: 505 IISSSHDDTILIWD 518
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 149 (57.5 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ S C++ LE H V C F D+
Sbjct: 380 TLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DE 435
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD+ A L
Sbjct: 436 KRIVSGAYDGKIKVWDLQAAL 456
Score = 147 (56.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-G 77
IL G H GS + C+++ D R++ +G D TV VW + I +
Sbjct: 257 ILSG--HTGSVL-CLQY--DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA 311
Query: 78 WGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGS 137
G + C + R + + + P + + VG H +AV V F+ + +VS S
Sbjct: 312 NGIMVTCS--KDRSIAVW-DMVSPRDITIR---RVLVG-HRAAVNVVDFDDR--YIVSAS 362
Query: 138 VDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
D+T+K+W + +L ++TL H R + C + L+ SGS+D T+ +WD+
Sbjct: 363 GDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWDI 412
Score = 135 (52.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 26/81 (32%), Positives = 51/81 (62%)
Query: 111 SETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSC 170
S + HT +V ++++++ +++SGS D TV++WDV + CIKTL H V F+
Sbjct: 255 SRILSGHTGSVLCLQYDNR--VIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA- 311
Query: 171 DDSLLASGSNDKTVTIWDMLA 191
+ ++ + S D+++ +WDM++
Sbjct: 312 -NGIMVTCSKDRSIAVWDMVS 331
Score = 125 (49.1 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+VSG D T+K+WD +C + L HT V C + D+ ++ SGS+D TV +WD+
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDV 289
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 46/163 (28%), Positives = 68/163 (41%)
Query: 38 DTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVK 97
D R + + D T+ VW D L + GH +G AC R R+ +
Sbjct: 354 DDRYIVSASGDRTIKVWSMDTLEFVRTL--AGHRRGI--------ACLQYRGRLVVSGSS 403
Query: 98 QIIPTRVGVY-GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV-----P--- 148
++ G + H V +RF+ K +VSG+ D +K+WD+ P
Sbjct: 404 DNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKR--IVSGAYDGKIKVWDLQAALDPRAL 461
Query: 149 -SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML 190
S C+ +L HT V F DD + S S+D T+ IWD L
Sbjct: 462 SSEICLCSLVQHTGRVFRLQF--DDFQIVSSSHDDTILIWDFL 502
Score = 56 (24.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 193 LLASGSNDKTVTIWDMRGNLSVDV 216
L+ SGS+D T+ +WD+ + + V
Sbjct: 397 LVVSGSSDNTIRLWDIHSGVCLRV 420
Score = 46 (21.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 184 VTIWDMLATLLASGSNDKTVTIWDM 208
V + D + S S D+T+ +W M
Sbjct: 348 VNVVDFDDRYIVSASGDRTIKVWSM 372
Score = 43 (20.2 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
++ + S D+++ +WDM
Sbjct: 314 IMVTCSKDRSIAVWDM 329
Score = 41 (19.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 194 LASGSNDKTVTIWDMRGNL 212
+ SG+ D + +WD++ L
Sbjct: 438 IVSGAYDGKIKVWDLQAAL 456
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 149 (57.5 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D T++LWD+ S C++ LE H V C F D+
Sbjct: 380 TLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DE 435
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD+ A L
Sbjct: 436 KRIVSGAYDGKIKVWDLQAAL 456
Score = 147 (56.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE-G 77
IL G H GS + C+++ D R++ +G D TV VW + I +
Sbjct: 257 ILSG--HTGSVL-CLQY--DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA 311
Query: 78 WGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGS 137
G + C + R + + + P + + VG H +AV V F+ + +VS S
Sbjct: 312 NGIMVTCS--KDRSIAVW-DMVSPRDITIR---RVLVG-HRAAVNVVDFDDR--YIVSAS 362
Query: 138 VDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
D+T+K+W + +L ++TL H R + C + L+ SGS+D T+ +WD+
Sbjct: 363 GDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWDI 412
Score = 135 (52.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 26/81 (32%), Positives = 51/81 (62%)
Query: 111 SETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSC 170
S + HT +V ++++++ +++SGS D TV++WDV + CIKTL H V F+
Sbjct: 255 SRILSGHTGSVLCLQYDNR--VIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA- 311
Query: 171 DDSLLASGSNDKTVTIWDMLA 191
+ ++ + S D+++ +WDM++
Sbjct: 312 -NGIMVTCSKDRSIAVWDMVS 331
Score = 125 (49.1 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+VSG D T+K+WD +C + L HT V C + D+ ++ SGS+D TV +WD+
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDV 289
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 46/163 (28%), Positives = 68/163 (41%)
Query: 38 DTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVK 97
D R + + D T+ VW D L + GH +G AC R R+ +
Sbjct: 354 DDRYIVSASGDRTIKVWSMDTLEFVRTL--AGHRRGI--------ACLQYRGRLVVSGSS 403
Query: 98 QIIPTRVGVY-GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV-----P--- 148
++ G + H V +RF+ K +VSG+ D +K+WD+ P
Sbjct: 404 DNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKR--IVSGAYDGKIKVWDLQAALDPRAL 461
Query: 149 -SLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML 190
S C+ +L HT V F DD + S S+D T+ IWD L
Sbjct: 462 SSEICLCSLVQHTGRVFRLQF--DDFQIVSSSHDDTILIWDFL 502
Score = 56 (24.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 193 LLASGSNDKTVTIWDMRGNLSVDV 216
L+ SGS+D T+ +WD+ + + V
Sbjct: 397 LVVSGSSDNTIRLWDIHSGVCLRV 420
Score = 46 (21.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 184 VTIWDMLATLLASGSNDKTVTIWDM 208
V + D + S S D+T+ +W M
Sbjct: 348 VNVVDFDDRYIVSASGDRTIKVWSM 372
Score = 43 (20.2 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
++ + S D+++ +WDM
Sbjct: 314 IMVTCSKDRSIAVWDM 329
Score = 41 (19.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 194 LASGSNDKTVTIWDMRGNL 212
+ SG+ D + +WD++ L
Sbjct: 438 IVSGAYDGKIKVWDLQAAL 456
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 141 (54.7 bits), Expect = 5.4e-10, Sum P(3) = 5.4e-10
Identities = 32/72 (44%), Positives = 39/72 (54%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + V S F+ SS+L S K V LWD+ T I+ LE H V C FS D +LLA
Sbjct: 213 HQNWVYSCAFSPDSSMLCSVGASKAVFLWDMDKYTMIRKLEGHHHDVVACDFSPDGALLA 272
Query: 177 SGSNDKTVTIWD 188
+ S D V IWD
Sbjct: 273 TASYDTRVYIWD 284
Score = 134 (52.2 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 31/75 (41%), Positives = 40/75 (53%)
Query: 117 HTSAVTSVRFNHKSSL-LVSGSVDKTVKLWDVPSL-TCIKTLESHTRYVTCCTFSCDDSL 174
HT V + F SL LVS S DKT+++WD+ +K L H +V C FS D S+
Sbjct: 169 HTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSM 228
Query: 175 LASGSNDKTVTIWDM 189
L S K V +WDM
Sbjct: 229 LCSVGASKAVFLWDM 243
Score = 116 (45.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 45/175 (25%), Positives = 74/175 (42%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW 78
+LRG H C FSPD+ +L + G + V +W D ++I + H +
Sbjct: 209 VLRG--HQNWVYSCA-FSPDSSMLCSVGASKAVFLWDMDKYTMIRKLEGHHHDVVACDFS 265
Query: 79 --GRVPACPLCRTRVF--STFVKQIIPTRVGVYGQDSETV--GRHTSAVTSVRFNHKSSL 132
G + A TRV+ I+ ++ + G + V SV F+H
Sbjct: 266 PDGALLATASYDTRVYIWDPHTGDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLH 325
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+ S + DK V+ W + ++ CC FS D S+LA+G++D +V W
Sbjct: 326 VASLADDKMVRFWRIDEDYPVQVAPLSNGL--CCAFSTDGSVLAAGTHDGSVYFW 378
Score = 115 (45.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 125 RFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSL-LASGSNDKT 183
RF LL +G + +K+WDV + + L HT V TF+ D SL L S S DKT
Sbjct: 135 RFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKT 194
Query: 184 VTIWDM 189
+ +WD+
Sbjct: 195 LRVWDL 200
Score = 49 (22.3 bits), Expect = 5.4e-10, Sum P(3) = 5.4e-10
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 34 RFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ 72
RF D LLATG ++ + +W L++ D HT+
Sbjct: 135 RFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVD--HTE 171
Score = 42 (19.8 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 193 LLASGSNDKTVTIWD 207
LLA+ S D V IWD
Sbjct: 270 LLATASYDTRVYIWD 284
Score = 38 (18.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 191 ATLLASGSNDKTVTIWDM 208
+++L S K V +WDM
Sbjct: 226 SSMLCSVGASKAVFLWDM 243
Score = 37 (18.1 bits), Expect = 5.4e-10, Sum P(3) = 5.4e-10
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 192 TLLASGSNDKTVTIW 206
++LA+G++D +V W
Sbjct: 364 SVLAAGTHDGSVYFW 378
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 144 (55.7 bits), Expect = 5.5e-10, Sum P(3) = 5.5e-10
Identities = 34/79 (43%), Positives = 43/79 (54%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + V F+ SS+L S K V LWD+ T I+ LE H V CC FS D +LLA
Sbjct: 214 HQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKLEGHHNDVVCCEFSPDGALLA 273
Query: 177 SGSNDKTVTIWDM-LATLL 194
+ S D V +WD AT+L
Sbjct: 274 TASYDTRVIVWDPHTATVL 292
Score = 133 (51.9 bits), Expect = 7.7e-09, Sum P(3) = 7.7e-09
Identities = 31/75 (41%), Positives = 40/75 (53%)
Query: 117 HTSAVTSVRFNHKSSL-LVSGSVDKTVKLWDVPSL-TCIKTLESHTRYVTCCTFSCDDSL 174
HT V + F SL LVS S DKT+++WD+ +K L H +V C FS D S+
Sbjct: 170 HTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLKDDGNMVKVLRGHQNWVYCSAFSPDSSV 229
Query: 175 LASGSNDKTVTIWDM 189
L S K V +WDM
Sbjct: 230 LCSVGAGKAVFLWDM 244
Score = 114 (45.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 43/164 (26%), Positives = 71/164 (43%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRI----EGWGRVPACPLC 87
C FSPD+ +L + G + V +W D +LI + GH + G + A
Sbjct: 220 CSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKLE--GHHNDVVCCEFSPDGALLATASY 277
Query: 88 RTRV--FSTFVKQIIPTRVGVYGQDSETV--GRHTSAVTSVRFNHKSSLLVSGSVDKTVK 143
TRV + ++ ++ S G + V SV F H + S + D+ V+
Sbjct: 278 DTRVIVWDPHTATVLLELGHLFPPPSPIFAGGANDRWVRSVAFCHDGRHIASVTDDRLVR 337
Query: 144 LWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
W + + + + T + CC FS D S+L++GS D +V W
Sbjct: 338 FWSIDEKSP-QAIGPLTNGL-CCAFSTDGSVLSAGSRDGSVHFW 379
Score = 45 (20.9 bits), Expect = 5.5e-10, Sum P(3) = 5.5e-10
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 34 RFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHT 71
+F D LLATG ++ + +W L++ D HT
Sbjct: 136 KFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLMD--HT 171
Score = 42 (19.8 bits), Expect = 7.7e-09, Sum P(3) = 7.7e-09
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 193 LLASGSNDKTVTIWD 207
LLA+ S D V +WD
Sbjct: 271 LLATASYDTRVIVWD 285
Score = 36 (17.7 bits), Expect = 5.5e-10, Sum P(3) = 5.5e-10
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 192 TLLASGSNDKTVTIW 206
++L++GS D +V W
Sbjct: 365 SVLSAGSRDGSVHFW 379
>DICTYBASE|DDB_G0292592 [details] [associations]
symbol:lst8 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0043520 "regulation of
myosin II filament assembly" evidence=IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0032148 "activation of protein kinase B
activity" evidence=IMP] [GO:0031932 "TORC2 complex" evidence=IDA]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IMP] [GO:0007190 "activation of adenylate
cyclase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292592 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000194 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190 GO:GO:0032148
GO:GO:0030838 GO:GO:0031152 GO:GO:0031932 HSSP:P16649 KO:K08266
GO:GO:0043327 GO:GO:0043520 OMA:NNKGNCY RefSeq:XP_629512.1
ProteinModelPortal:Q54D08 STRING:Q54D08 PRIDE:Q54D08
EnsemblProtists:DDB0233210 GeneID:8628763 KEGG:ddi:DDB_G0292592
ProtClustDB:CLSZ2429378 Uniprot:Q54D08
Length = 304
Score = 141 (54.7 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 112 ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD 171
+ + H + + F+ + LL + S D TVK+W+ ++TL H R+V C FS D
Sbjct: 201 QKIEAHNAPILKTLFSPDTKLLATCSADHTVKIWNTKKFNVVQTLNGHQRWVWDCAFSND 260
Query: 172 DSLLASGSNDKTVTIWDM 189
+ L +GS+D +WD+
Sbjct: 261 SAYLVTGSSDHLSRLWDL 278
Score = 81 (33.6 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGH 70
FSPDT+LLAT D TV +W + +++ N GH
Sbjct: 215 FSPDTKLLATCSADHTVKIWNTKKFNVVQTLN--GH 248
Score = 79 (32.9 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 112 ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
+T+ H V F++ S+ LV+GS D +LWD+ +KT H + V
Sbjct: 243 QTLNGHQRWVWDCAFSNDSAYLVTGSSDHLSRLWDLHQGDAVKTYSGHIKAV 294
Score = 51 (23.0 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
H G N+ V F + + + TG +D TV +W
Sbjct: 75 HKG-NVTGVGFQKEGKWMYTGSEDGTVKIW 103
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 151 (58.2 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 51/190 (26%), Positives = 87/190 (45%)
Query: 7 GDGPSLFNGTELILRGSVHIGSN-MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMET 65
GD ++ + T+ ++ ++ S+ + + SPD +LL + G + VW + L I
Sbjct: 39 GDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSW 98
Query: 66 NDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVR 125
+GH +G + G + L T K ++ G G + H V+S+
Sbjct: 99 --KGH-EGPVMGMACHASGGLLATAGADR--KVLVWDVDG--GFCTHYFRGHKGVVSSIL 151
Query: 126 FNHKSS--LLVSGSVDKTVKLWDVPSLT----CIKTLESHTRYVTCCTFSCDDSLLASGS 179
F+ S+ +L+SGS D TV++WD+ + C+ +E H VT S D L S
Sbjct: 152 FHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAG 211
Query: 180 NDKTVTIWDM 189
DK V +WD+
Sbjct: 212 RDKVVNLWDL 221
Score = 147 (56.8 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 51/170 (30%), Positives = 73/170 (42%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
CV S + L+ TG D+TV +W + S I GH G + A + +
Sbjct: 410 CVSSSGNV-LIVTGSKDKTVRLWNATSKSCIGVGT--GHN-------GDILAVAFAK-KS 458
Query: 92 FSTFVKQIIPTRVGVYG-----QDSE---------TVGRHTSAVTSVRFNHKSSLLVSGS 137
FS FV + V+ +DSE V H + SV SL+ +GS
Sbjct: 459 FSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGS 518
Query: 138 VDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
D+T +W +P L + TL+ H R + FS D + + S DKTV IW
Sbjct: 519 EDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIW 568
Score = 128 (50.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 40/161 (24%), Positives = 69/161 (42%)
Query: 29 NMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEG--WGRVPACPL 86
++ V + + L+ TG +D T ++WR DL ++ +GH + RI + V C +
Sbjct: 501 DINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTL--KGHKR-RIFSVEFSTVDQCVM 557
Query: 87 CRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
+ + + I G +T HTS+V F + VS D +KLW+
Sbjct: 558 TASGDKTVKIWAISD------GSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWN 611
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
V + CI T + H V ++A+G D + +W
Sbjct: 612 VNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 118 (46.6 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + SV F+ +++ S DKTVK+W + +C+KT E HT V +F D
Sbjct: 536 TLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDG 595
Query: 173 SLLASGSNDKTVTIWDM 189
+ S D + +W++
Sbjct: 596 TQFVSCGADGLLKLWNV 612
Score = 111 (44.1 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 111 SETVGRHTSAVTSVRFNHKSS---LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
S + H V S+ SS L+V+GS DKTV+LW+ S +CI H +
Sbjct: 394 SYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVA 453
Query: 168 FSCDD-SLLASGSNDKTVTIWDM 189
F+ S SGS D+T+ +W +
Sbjct: 454 FAKKSFSFFVSGSGDRTLKVWSL 476
Score = 51 (23.0 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 192 TLLASGSNDKTVTIWDMRGNLSVDV--PLN 219
+ SGS D+T+ +W + G +S D P+N
Sbjct: 460 SFFVSGSGDRTLKVWSLDG-ISEDSEEPIN 488
Score = 46 (21.3 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 12 LFNGTE--LILRGSVHIGSNMRCVRFSPDT-RLLATGGDDETVTVWRSDDLS 60
L+N T I G+ H G ++ V F+ + +G D T+ VW D +S
Sbjct: 430 LWNATSKSCIGVGTGHNG-DILAVAFAKKSFSFFVSGSGDRTLKVWSLDGIS 480
Score = 41 (19.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLS 60
S + + S D L + G D+ V +W D S
Sbjct: 193 SAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYS 225
Score = 39 (18.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 196 SGSNDKTVTIW 206
+ S DKTV IW
Sbjct: 558 TASGDKTVKIW 568
Score = 36 (17.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 4/14 (28%), Positives = 9/14 (64%)
Query: 193 LLASGSNDKTVTIW 206
++A+G D + +W
Sbjct: 639 MIATGGGDAVINLW 652
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 137 (53.3 bits), Expect = 9.3e-10, Sum P(3) = 9.3e-10
Identities = 23/72 (31%), Positives = 47/72 (65%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H ++V SV+++ K+ L+V+ S D+T++ WD+ + CI+ + +H R + C ++ +
Sbjct: 346 HLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYN--GKFIV 403
Query: 177 SGSNDKTVTIWD 188
SGS+D T+ I++
Sbjct: 404 SGSSDLTIRIFE 415
Score = 129 (50.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 128 HKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+ ++VSGS D+TV +WDV S + L H+ V C F +LL SGS+D T+ IW
Sbjct: 229 YDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIW 288
Query: 188 D 188
D
Sbjct: 289 D 289
Score = 56 (24.8 bits), Expect = 9.3e-10, Sum P(3) = 9.3e-10
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
H GS + C+ F LL +G D T+ +W
Sbjct: 260 HSGSVL-CLDFCRRRNLLVSGSSDSTIIIW 288
Score = 42 (19.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ + S+D+T+ WD+
Sbjct: 361 LIVTASSDRTLRTWDI 376
Score = 38 (18.4 bits), Expect = 9.3e-10, Sum P(3) = 9.3e-10
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 194 LASGSNDKTVTIWD 207
+ SG D TV IW+
Sbjct: 442 IVSGGYDGTVRIWN 455
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 146 (56.5 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 51/174 (29%), Positives = 79/174 (45%)
Query: 21 RGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW-G 79
+G HI ++ V S D + D T+ +W DL ET G T R G G
Sbjct: 63 KGHSHI---VQDVTISADGAYALSASWDRTLRLW---DL----ET---GETTQRFVGHKG 109
Query: 80 RVPACPLCRT--RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFN--HKSSLLVS 135
V + + + ++ S + + G+ T+ H V++VR + +SS ++S
Sbjct: 110 DVLSVSIAKNLRQIVSASRDKTVKVW-NTIGECMATLTGHNDWVSAVRISPSDQSSTVIS 168
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S DKTVK WD+ + HT Y++C T S D SL AS D + +WD+
Sbjct: 169 ASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDL 222
Score = 118 (46.6 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 52/182 (28%), Positives = 77/182 (42%)
Query: 18 LILRGSV--HIG--SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG 73
L+LRG++ H G +++ PD LL +G D+T+ W+ E N G +
Sbjct: 7 LVLRGTLEGHNGWVTSLATTPAHPD--LLLSGSRDKTLIKWKLTG----GEDNQYGIPKK 60
Query: 74 RIEGWGR-VPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGR---HTSAVTSVRFNHK 129
+G V + ++ R+ + ET R H V SV
Sbjct: 61 SFKGHSHIVQDVTISADGAYALSASWDRTLRLWDL-ETGETTQRFVGHKGDVLSVSIAKN 119
Query: 130 SSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD--SLLASGSNDKTVTIW 187
+VS S DKTVK+W+ C+ TL H +V+ S D S + S S DKTV W
Sbjct: 120 LRQIVSASRDKTVKVWNTIG-ECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSW 178
Query: 188 DM 189
D+
Sbjct: 179 DL 180
Score = 109 (43.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 36/150 (24%), Positives = 64/150 (42%)
Query: 56 SDDLSLIMETNDRGHTQGRIEGWGRVPACP--LCRTRVFSTFVK-QIIPTRVGVYGQDSE 112
+D L++ GH G + PA P L T +K ++ YG +
Sbjct: 2 ADQEVLVLRGTLEGHN-GWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKK 60
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
+ H+ V V + + +S S D+T++LWD+ + + H V + + +
Sbjct: 61 SFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNL 120
Query: 173 SLLASGSNDKTVTIWDMLATLLAS--GSND 200
+ S S DKTV +W+ + +A+ G ND
Sbjct: 121 RQIVSASRDKTVKVWNTIGECMATLTGHND 150
Score = 43 (20.2 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 192 TLLASGSNDKTVTIWDMRGN 211
+L AS D + +WD+ N
Sbjct: 206 SLCASAGKDGVIILWDLNKN 225
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 146 (56.5 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 51/174 (29%), Positives = 79/174 (45%)
Query: 21 RGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW-G 79
+G HI ++ V S D + D T+ +W DL ET G T R G G
Sbjct: 63 KGHSHI---VQDVTISADGAYALSASWDRTLRLW---DL----ET---GETTQRFVGHKG 109
Query: 80 RVPACPLCRT--RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFN--HKSSLLVS 135
V + + + ++ S + + G+ T+ H V++VR + +SS ++S
Sbjct: 110 DVLSVSIAKNLRQIVSASRDKTVKVW-NTIGECMATLTGHNDWVSAVRISPSDQSSTVIS 168
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S DKTVK WD+ + HT Y++C T S D SL AS D + +WD+
Sbjct: 169 ASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDL 222
Score = 118 (46.6 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 52/182 (28%), Positives = 77/182 (42%)
Query: 18 LILRGSV--HIG--SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG 73
L+LRG++ H G +++ PD LL +G D+T+ W+ E N G +
Sbjct: 7 LVLRGTLEGHNGWVTSLATTPAHPD--LLLSGSRDKTLIKWKLTG----GEDNQYGIPKK 60
Query: 74 RIEGWGR-VPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGR---HTSAVTSVRFNHK 129
+G V + ++ R+ + ET R H V SV
Sbjct: 61 SFKGHSHIVQDVTISADGAYALSASWDRTLRLWDL-ETGETTQRFVGHKGDVLSVSIAKN 119
Query: 130 SSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD--SLLASGSNDKTVTIW 187
+VS S DKTVK+W+ C+ TL H +V+ S D S + S S DKTV W
Sbjct: 120 LRQIVSASRDKTVKVWNTIG-ECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSW 178
Query: 188 DM 189
D+
Sbjct: 179 DL 180
Score = 109 (43.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 36/150 (24%), Positives = 64/150 (42%)
Query: 56 SDDLSLIMETNDRGHTQGRIEGWGRVPACP--LCRTRVFSTFVK-QIIPTRVGVYGQDSE 112
+D L++ GH G + PA P L T +K ++ YG +
Sbjct: 2 ADQEVLVLRGTLEGHN-GWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKK 60
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
+ H+ V V + + +S S D+T++LWD+ + + H V + + +
Sbjct: 61 SFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNL 120
Query: 173 SLLASGSNDKTVTIWDMLATLLAS--GSND 200
+ S S DKTV +W+ + +A+ G ND
Sbjct: 121 RQIVSASRDKTVKVWNTIGECMATLTGHND 150
Score = 43 (20.2 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 192 TLLASGSNDKTVTIWDMRGN 211
+L AS D + +WD+ N
Sbjct: 206 SLCASAGKDGVIILWDLNKN 225
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 147 (56.8 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+VSG D T+K+WD L C+KTL HT V C + DD ++ SGS+D TV +WD+
Sbjct: 223 IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQY--DDKVIISGSSDSTVRVWDV 277
Score = 147 (56.8 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 51/171 (29%), Positives = 84/171 (49%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVW--RSDDL--SLIMETNDRGHTQGRIEGWGR 80
H GS + C+++ D +++ +G D TV VW + ++ +LI H R G
Sbjct: 249 HTGSVL-CLQY--DDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHL--RFNN-GM 302
Query: 81 VPACPLCRT-RVFS-TFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSV 138
+ C R+ V+ T +I RV VG H +AV V F+ K +VS S
Sbjct: 303 MVTCSKDRSIAVWDMTSPSEITLRRV--------LVG-HRAAVNVVDFDEK--YIVSASG 351
Query: 139 DKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
D+T+K+W + ++TL H R + C + D L+ SGS+D ++ +WD+
Sbjct: 352 DRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNSIRLWDI 400
Score = 141 (54.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H + +++ + L+VSGS D +++LWD+ C++ LE H V C F D
Sbjct: 368 TLNGHKRGIACLQYRDR--LVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRF--DT 423
Query: 173 SLLASGSNDKTVTIWDMLATL 193
+ SG+ D + +WD++A L
Sbjct: 424 KRIVSGAYDGKIKVWDLVAAL 444
Score = 118 (46.6 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 24/78 (30%), Positives = 47/78 (60%)
Query: 112 ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD 171
+T+ HT +V ++++ K +++SGS D TV++WDV + + TL H V F+
Sbjct: 244 KTLMGHTGSVLCLQYDDK--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN-- 299
Query: 172 DSLLASGSNDKTVTIWDM 189
+ ++ + S D+++ +WDM
Sbjct: 300 NGMMVTCSKDRSIAVWDM 317
Score = 118 (46.6 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 43/163 (26%), Positives = 73/163 (44%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
C+++ D + +G D T+ +W DL + GHT G V LC
Sbjct: 215 CLQY--DDGKIVSGLRDNTIKIWDRTDLQCVKTL--MGHT-------GSV----LCLQYD 259
Query: 92 FSTFVKQIIPTRVGVY----GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV 147
+ + V V+ G+ T+ H AV +RFN+ ++V+ S D+++ +WD+
Sbjct: 260 DKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDM 317
Query: 148 --PS-LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
PS +T + L H V F D+ + S S D+T+ +W
Sbjct: 318 TSPSEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVW 358
Score = 49 (22.3 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ SGS+D ++ +WD+
Sbjct: 385 LVVSGSSDNSIRLWDI 400
Score = 43 (20.2 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 193 LLASGSNDKTVTIWDM 208
++ + S D+++ +WDM
Sbjct: 302 MMVTCSKDRSIAVWDM 317
Score = 42 (19.8 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 184 VTIWDMLATLLASGSNDKTVTIW 206
V + D + S S D+T+ +W
Sbjct: 336 VNVVDFDEKYIVSASGDRTIKVW 358
Score = 42 (19.8 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNYCC 222
+ SG+ D + +WD+ L N C
Sbjct: 426 IVSGAYDGKIKVWDLVAALDPRAASNTLC 454
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 142 (55.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 36/83 (43%), Positives = 44/83 (53%)
Query: 132 LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLA 191
+L S S D TV+LWDV CI TL H V FS D LASGS DK V IW+ +
Sbjct: 423 MLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQS 482
Query: 192 -TLLAS--GSNDKTVTIWDMRGN 211
TL+ S G+ W+ RG+
Sbjct: 483 GTLVHSYRGTGGIFEVCWNARGD 505
Score = 116 (45.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 30/100 (30%), Positives = 54/100 (54%)
Query: 112 ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD 171
+T HT+ V +++++ LL S S D T+K+W + TC+ L++H++ + ++
Sbjct: 352 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEI----YTIK 407
Query: 172 DSLLASGSNDKTVTIWDMLATLLASGSNDKTVTIWDM-RG 210
S G+++ I +LAS S D TV +WD+ RG
Sbjct: 408 WSPTGPGTSNPNSNI------MLASASFDSTVRLWDVDRG 441
Score = 56 (24.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 2 HEFPMG-DGP-SLFNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDL 59
H PM DG + +LRG H C ++P + LLA+G D T +W ++
Sbjct: 154 HSKPMEIDGDVEIPPNKATVLRG--HESEVFICA-WNPVSDLLASGSGDSTARIWNLNEN 210
Query: 60 S 60
S
Sbjct: 211 S 211
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 144 (55.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 45/162 (27%), Positives = 76/162 (46%)
Query: 35 FSPDTRLLATGGDDETVTVWRSD-DLSLIMETNDRGHT----QGRIEGWGRVPA-CPLCR 88
FSP + + D T+ +W + + +L+ +GH + +G A C R
Sbjct: 426 FSPPGDFVLSSSADTTIRLWSTKLNANLVCY---KGHNYPVWDAQFSPFGHYFASCSHDR 482
Query: 89 T-RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV 147
T R++S + +I P R+ + H S V V+++ + + +GS DKTV+LWDV
Sbjct: 483 TARIWS--MDRIQPLRI---------MAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDV 531
Query: 148 PSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+ C++ H V S D +ASG D T+ +WD+
Sbjct: 532 QTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDL 573
Score = 141 (54.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 45/168 (26%), Positives = 74/168 (44%)
Query: 34 RFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFS 93
+FSP A+ D T +W D + + GH ++ P C T
Sbjct: 467 QFSPFGHYFASCSHDRTARIWSMDRIQPLRIM--AGHLSD-VDCVQWHPNCNYIATGSSD 523
Query: 94 TFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCI 153
V+ + + G + +G H S V S+ + + SG D T+ +WD+ + CI
Sbjct: 524 KTVR-LWDVQTGECVRIF--IG-HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCI 579
Query: 154 KTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDK 201
L H V ++S + SLLASGS D TV +WD+ ++ + + +K
Sbjct: 580 TPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEK 627
Score = 96 (38.9 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 30/91 (32%), Positives = 42/91 (46%)
Query: 104 VGVYGQDSETV--GRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP---SLTCIKTLES 158
+G G+ S T+ G H+ V S F+ ++S S D T++LW +L C K
Sbjct: 403 IGPNGRRSYTLLLG-HSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYK---G 458
Query: 159 HTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
H V FS AS S+D+T IW M
Sbjct: 459 HNYPVWDAQFSPFGHYFASCSHDRTARIWSM 489
Score = 56 (24.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 192 TLLASGSNDKTVTIWDM 208
+LLASGS D TV +WD+
Sbjct: 599 SLLASGSADCTVKLWDV 615
Score = 50 (22.7 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 24 VHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
V+ + + C S D L+A G D ++ VW
Sbjct: 349 VNTHNGLNCSSISHDGSLVAGGFSDSSIKVW 379
Score = 47 (21.6 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 194 LASGSNDKTVTIWDM 208
+ASG D T+ +WD+
Sbjct: 559 MASGDEDGTIMMWDL 573
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 129 (50.5 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H+ VTS+ F+ S L+S S D+T ++ + S +K HT YV F+ D S +
Sbjct: 304 HSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRII 363
Query: 177 SGSNDKTVTIWDMLAT 192
+ S+D TV +WD T
Sbjct: 364 TASSDCTVKVWDSKTT 379
Score = 128 (50.1 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 109 QDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTF 168
Q E+ H V + F+ S +L SGS D +K+W + + CI+ ++H++ VT +F
Sbjct: 254 QADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSF 313
Query: 169 SCDDSLLASGSNDKTVTI 186
S D S L S S D+T I
Sbjct: 314 SRDGSQLLSTSFDQTARI 331
Score = 111 (44.1 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 35/128 (27%), Positives = 58/128 (45%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR--T 89
C+ FS D+ +LA+G D + +WR + + D H+QG V + R +
Sbjct: 268 CIDFSRDSEMLASGSQDGKIKIWRIRT-GVCIRRFD-AHSQG-------VTSLSFSRDGS 318
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
++ ST Q G+ + HTS V F S +++ S D TVK+WD +
Sbjct: 319 QLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKT 378
Query: 150 LTCIKTLE 157
C++T +
Sbjct: 379 TDCLQTFK 386
Score = 67 (28.6 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 19 ILRGSVHIG--SNMRCVRFSPDTRLLATGGDDETVTVW 54
+L ++ G S+ C RFSPD + LA+ D + VW
Sbjct: 203 VLTHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVW 240
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 194 LASGSNDKTVTIWDMR 209
+ + S+D TV +WD +
Sbjct: 362 IITASSDCTVKVWDSK 377
Score = 38 (18.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 159 HTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
H + V T +LLA+ S D T+ +W
Sbjct: 481 HEKDVIGITHHPHRNLLATYSEDCTMKLW 509
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 144 (55.7 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V +V F+H+ ++S S D+T+++W+ S CI L H YV C F +
Sbjct: 88 TLLAHLDYVRTVAFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTE 147
Query: 173 SLLASGSNDKTVTIWDM 189
+ S S D+TV +WD+
Sbjct: 148 DQIVSASLDQTVRVWDI 164
Score = 122 (48.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 112 ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCD 171
E H V V F+ + L VSG D +K+W+ CI TL +H YV F +
Sbjct: 45 EKFDEHDGPVRGVAFHQQMPLFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHE 104
Query: 172 DSLLASGSNDKTVTIWD 188
+ S S+D+T+ IW+
Sbjct: 105 YPWILSASDDQTIRIWN 121
Score = 51 (23.0 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
H G +R V F L +GGDD + VW
Sbjct: 50 HDGP-VRGVAFHQQMPLFVSGGDDYKIKVW 78
Score = 48 (22.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 194 LASGSNDKTVTIWDMRG 210
+ S S D+TV +WD+ G
Sbjct: 150 IVSASLDQTVRVWDISG 166
Score = 45 (20.9 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 193 LLASGSNDKTVTIWDM 208
L+ S D+++ +WDM
Sbjct: 266 LILSNGEDRSIRVWDM 281
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 160 (61.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 52/156 (33%), Positives = 74/156 (47%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V FSPD+R +A G D + +W D + +T +R H G I P T
Sbjct: 861 VAFSPDSRQIAAGFKDGKIFIW--DAAGTLQKTLER-HP-GAIMSIAFSPDVKQLVTCST 916
Query: 93 STFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC 152
+ +K+ T GV E VG H+ VT++ + ++ SGS DKT+KLWD +
Sbjct: 917 DSTIKRWDITIGGV----QEAVG-HSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDL 971
Query: 153 IKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
KTL H V FS D+ + S S++ V IWD
Sbjct: 972 QKTLTGHLDTVEKVVFSLDNRQIVSCSSE-AVKIWD 1006
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 48/175 (27%), Positives = 71/175 (40%)
Query: 27 GSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPL 86
G + FS D + +A G W D +++ G Q ++G
Sbjct: 729 GYGLHAGAFSADCKQIAAFG-------WSRDSTCIMLFDTATGDLQKILKGHSHE----- 776
Query: 87 CRTRVFSTFVKQIIPTRVG--------VYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSV 138
C T FS+ +Q++ V G +T HT V SV + +VSGS+
Sbjct: 777 CSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSI 836
Query: 139 DKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATL 193
+ VKLWD + +KTL S + FS D +A+G D + IWD TL
Sbjct: 837 E-AVKLWDAATGDLLKTLASG--FAGSVAFSPDSRQIAAGFKDGKIFIWDAAGTL 888
Score = 118 (46.6 bits), Expect = 0.00049, P = 0.00049
Identities = 50/171 (29%), Positives = 72/171 (42%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW 78
IL+G H S M FS D+R L TG D TV +W + L E GHT G +
Sbjct: 769 ILKGHSHECSTMA---FSSDSRQLVTGSVDCTVRLWNTTTGDL--EKTFVGHT-GTVLS- 821
Query: 79 GRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSV 138
A ++ S + + + G +T+ + SV F+ S + +G
Sbjct: 822 ---VAISSDGRQIVSGSI-EAVKLWDAATGDLLKTLA--SGFAGSVAFSPDSRQIAAGFK 875
Query: 139 DKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
D + +WD T KTLE H + FS D L + S D T+ WD+
Sbjct: 876 DGKIFIWDAAG-TLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDI 925
Score = 112 (44.5 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 31/85 (36%), Positives = 43/85 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H+ +++ F+ S LV+GSVD TV+LW+ + KT HT V S D +
Sbjct: 773 HSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIV 832
Query: 177 SGSNDKTVTIWDM----LATLLASG 197
SGS + V +WD L LASG
Sbjct: 833 SGSIE-AVKLWDAATGDLLKTLASG 856
Score = 107 (42.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 36/143 (25%), Positives = 61/143 (42%)
Query: 69 GHTQGRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNH 128
GH GRI+ W L + + ++ T V Q E + + +T + F+
Sbjct: 1037 GHCNGRIKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDI-QLQEAI--FNTQITGLVFSP 1093
Query: 129 KSSLLVSGSVDKTVKLWDVPSLTCIKTLESHT---------------RYVTCCTFSCDDS 173
+ L++S S D+ +KLWD + K L H+ ++ FS D
Sbjct: 1094 DAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQ 1153
Query: 174 LLASGSNDKTVTIWDMLATLLAS 196
+A+ S DKT+ +W + +L AS
Sbjct: 1154 HIAAASADKTIRVWSIEKSLKAS 1176
Score = 66 (28.3 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 1 MHEFP--MGDGPSLFNG-TELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSD 57
+H+ P +G P + + T +I + H + R V FSPD + +A+G D + +W +
Sbjct: 592 LHKVPVWLGRAPPMEDSWTPMIQTLTGHSEAVWR-VAFSPDGKQIASGSDSGLIKLWDTT 650
Query: 58 DLSLIMETNDRGHTQGRIE 76
SL +T H + R +
Sbjct: 651 TGSL-QKTLSGSHPKRRYQ 668
Score = 49 (22.3 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVW 54
++ + F PD++L+ +G D +V +W
Sbjct: 674 VKAMAFLPDSKLIISGYYDGSVMLW 698
Score = 44 (20.5 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 194 LASGSNDKTVTIWDMRGNL 212
+A+G D + IWD G L
Sbjct: 870 IAAGFKDGKIFIWDAAGTL 888
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 145 (56.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 109 QDSETVGR---HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTC 165
+D + + R H + + V F+ S ++ S S DK++KLWD + + +L H V
Sbjct: 360 EDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQ 419
Query: 166 CTFSCDDSLLASGSNDKTVTIWDMLATLLAS---GSNDKTVTI-WDMRG 210
+S D LL SGS+D T+ +WD+ A LA+ G D+ + W G
Sbjct: 420 IAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDG 468
Score = 143 (55.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 51/161 (31%), Positives = 74/161 (45%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWR-SDDLSLIMETNDRGHTQGRIEGWGRVPACPL 86
S VR RL++ G DD T+ +W ++D + GH Q I +V P
Sbjct: 331 SRYNLVRGQGPERLVS-GSDDFTLFLWSPAEDKKPLARMT--GH-QALIN---QVLFSPD 383
Query: 87 CRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
R ++F K I G G+ ++ H +AV + ++ S LLVSGS D T+K+WD
Sbjct: 384 SRIVASASFDKSI-KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 442
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
V + L H V +S D +ASG DK + IW
Sbjct: 443 VKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 131 (51.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 49/164 (29%), Positives = 74/164 (45%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETND---RGHTQGRIE-GWGRVPACPLCR 88
V FSP + LA+G D TV W DLS ET +GH + W P
Sbjct: 120 VAFSPTGKYLASGSGDTTVRFW---DLST--ETPHFTCKGHRHWVLSISWS--PDGKKLA 172
Query: 89 TRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRF-----NHKSSLLVSGSVDKTVK 143
+ + V P+ G+ Q T+ H+ +T + + N + + S S D +V+
Sbjct: 173 SGCKNGQVLLWDPS-TGL--QVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 229
Query: 144 LWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+WD + C + L HT+ VTC + D LL S S D+T+ +W
Sbjct: 230 VWDTTAGRCERILTGHTQSVTCLRWG-GDGLLYSASQDRTIKVW 272
Score = 127 (49.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 30/86 (34%), Positives = 45/86 (52%)
Query: 103 RVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRY 162
RV + + ++ H+ AV SV F+ L SGS D TV+ WD+ + T T + H +
Sbjct: 99 RVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHW 158
Query: 163 VTCCTFSCDDSLLASGSNDKTVTIWD 188
V ++S D LASG + V +WD
Sbjct: 159 VLSISWSPDGKKLASGCKNGQVLLWD 184
Score = 117 (46.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 44/165 (26%), Positives = 71/165 (43%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEG--WGRVPACPLCRTR 90
+ +SPD + LA+G + V +W L + GH++ I G W + P CR
Sbjct: 162 ISWSPDGKKLASGCKNGQVLLW-DPSTGLQVGRTLTGHSKW-ITGLSWEPLHMNPECRY- 218
Query: 91 VFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSL 150
V S+ + G+ + HT +VT +R+ LL S S D+T+K+W
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG-DGLLYSASQDRTIKVWRAHDG 277
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSN--DKTVTIWDMLATL 193
+TL+ H +V S D +L + TV D+ +L
Sbjct: 278 VLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSL 322
Score = 50 (22.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 27 GSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG-RIEGWG 79
G + + +P+ R +A+ D +V VW D + E GHTQ WG
Sbjct: 204 GLSWEPLHMNPECRYVASSSKDGSVRVW--DTTAGRCERILTGHTQSVTCLRWG 255
Score = 45 (20.9 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 178 GSNDKTVTI-WDMLATLLASGSNDKTVTIW 206
G D+ + W +ASG DK + IW
Sbjct: 454 GHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 43 (20.2 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 193 LLASGSNDKTVTIW 206
LL S S D+T+ +W
Sbjct: 259 LLYSASQDRTIKVW 272
Score = 39 (18.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 194 LASGSNDKTVTIW 206
L SGS+D T+ +W
Sbjct: 344 LVSGSDDFTLFLW 356
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 146 (56.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 107 YGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCC 166
YG + + H+ ++ V + + +SGS D+T++LWD+ + + E HT+ V
Sbjct: 53 YGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSV 112
Query: 167 TFSCDDSLLASGSNDKTVTIWDMLA 191
FS D+ + SGS DKT+ +W+ LA
Sbjct: 113 AFSADNRQIVSGSRDKTIKLWNTLA 137
Score = 130 (50.8 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 37/107 (34%), Positives = 58/107 (54%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLES--HTRYVTC 165
G+ + HT V SV F+ + +VSGS DKT+KLW+ + C T++ HT +V+C
Sbjct: 96 GKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLA-ECKFTIQEDGHTDWVSC 154
Query: 166 CTFSCDDS--LLASGSNDKTVTIWDMLATLLAS---GSND--KTVTI 205
FS + S ++ S D+TV +W++ L + G N TVT+
Sbjct: 155 VRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTV 201
Score = 129 (50.5 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 117 HTSAVTSVRF--NHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSL 174
HT V+ VRF NH + ++VS D+TVK+W++ + H Y+ T S D SL
Sbjct: 148 HTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSL 207
Query: 175 LASGSNDKTVTIWDM 189
SG D +WD+
Sbjct: 208 CTSGGKDSKALLWDL 222
Score = 41 (19.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 183 TVTIWDMLATLLASGSNDKTVTIWDM 208
TVT+ +L SG D +WD+
Sbjct: 198 TVTV-SPDGSLCTSGGKDSKALLWDL 222
Score = 39 (18.8 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 20 LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETND-RGHTQ 72
L G H S+ V S D +G D+T+ +W DL+ T GHT+
Sbjct: 60 LYGHSHFISD---VVLSSDGNYALSGSWDQTLRLW---DLAAGKTTRRFEGHTK 107
>UNIPROTKB|Q9W5Z5 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing protein 1"
species:31033 "Takifugu rubripes" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00253 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
CTD:26118 OrthoDB:EOG40ZQXJ EMBL:AF157597 EMBL:AF064564
RefSeq:NP_001027919.1 UniGene:Tru.1848 ProteinModelPortal:Q9W5Z5
STRING:Q9W5Z5 GeneID:445931 KEGG:tru:445931 InParanoid:Q9W5Z5
Uniprot:Q9W5Z5
Length = 427
Score = 144 (55.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 47/155 (30%), Positives = 72/155 (46%)
Query: 34 RFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFS 93
+F D LLATG ++ + +W +L++ D HT + P L V +
Sbjct: 140 QFGRDQLLLATGLNNGRIKIWDVYTGTLLLNLMD--HTD-IVRDLTFAPDGSLML--VSA 194
Query: 94 TFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCI 153
+ K++ + G + + H + V S F+ SS+L S K V LW++ T I
Sbjct: 195 STDKKLRVWDLKDDGNMVKVLWGHPNRVYSSAFSPDSSVLCSVGASKAVLLWNMDKYTLI 254
Query: 154 KTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
+ LE H V C FS D +LLA+ S D V +WD
Sbjct: 255 RKLEGHHNDVVSCEFSPDGALLATASYDTRVIVWD 289
Score = 110 (43.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 117 HTSAVTSVRFNHKSSL-LVSGSVDKTVKLWDVPSL-TCIKTLESHTRYVTCCTFSCDDSL 174
HT V + F SL LVS S DK +++WD+ +K L H V FS D S+
Sbjct: 174 HTDIVRDLTFAPDGSLMLVSASTDKKLRVWDLKDDGNMVKVLWGHPNRVYSSAFSPDSSV 233
Query: 175 LASGSNDKTVTIWDM 189
L S K V +W+M
Sbjct: 234 LCSVGASKAVLLWNM 248
Score = 109 (43.4 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 125 RFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSL-LASGSNDKT 183
+F LL +G + +K+WDV + T + L HT V TF+ D SL L S S DK
Sbjct: 140 QFGRDQLLLATGLNNGRIKIWDVYTGTLLLNLMDHTDIVRDLTFAPDGSLMLVSASTDKK 199
Query: 184 VTIWDM 189
+ +WD+
Sbjct: 200 LRVWDL 205
Score = 49 (22.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 193 LLASGSNDKTVTIWD-MRGNLSVDV 216
LLA+ S D V +WD RG++ +++
Sbjct: 275 LLATASYDTRVIVWDHQRGSILLEL 299
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 144 (55.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 33/87 (37%), Positives = 49/87 (56%)
Query: 106 VYGQ-DS-ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
VYG D+ T+ H+ AV + +N S+L S S DKTV +WD + +K L+ HT +V
Sbjct: 95 VYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV 154
Query: 164 TCC-TFSCDDSLLASGSNDKTVTIWDM 189
C L+ +GS+D TV +WD+
Sbjct: 155 NSCYPARRGPQLVCTGSDDGTVKLWDI 181
Score = 142 (55.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 47/172 (27%), Positives = 77/172 (44%)
Query: 20 LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ--GRIEG 77
L+G H G+ M + ++ D +L + D+TV VW S+ + +GHT
Sbjct: 105 LKG--HSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRL--KGHTSFVNSCYP 159
Query: 78 WGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGS 137
R P +C T I + + +T ++T V +V FN S ++SG
Sbjct: 160 ARRGPQL-VCTGSDDGTVKLWDIRKKAAI-----QTF-QNTYQVLAVTFNDTSDQIISGG 212
Query: 138 VDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+D +K+WD+ T+ H VT + S + S L S + D TV +WD+
Sbjct: 213 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV----PSLTCIKTLESHT----RYVT 164
T+ H +VT + + + S L+S ++D TV++WDV P C+K + + + +
Sbjct: 230 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 289
Query: 165 CCTFSCDDSLLASGSNDKTVTIWD 188
C++S D S +A+GS D+ V +WD
Sbjct: 290 RCSWSPDGSKIAAGSADRFVYVWD 313
Score = 109 (43.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V +F+ S L S D+ + LW+V C TL+ H+ V ++ D S+
Sbjct: 65 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 175 LASGSNDKTVTIWD 188
L S S DKTV +WD
Sbjct: 124 LFSASTDKTVAVWD 137
Score = 55 (24.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 193 LLASGSNDKTVTIWDMRGNLSV 214
L+ +GS+D TV +WD+R ++
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAI 187
Score = 46 (21.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 194 LASGSNDKTVTIWDMR 209
L S + D TV +WD+R
Sbjct: 250 LLSNAMDNTVRVWDVR 265
Score = 46 (21.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 194 LASGSNDKTVTIWDMRGN 211
+ SG D + +WD+R N
Sbjct: 208 IISGGIDNDIKVWDLRQN 225
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 143 (55.4 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + + F+HK ++S S D+TV++W+ S I L H YV C F + L+A
Sbjct: 94 HLDYIRTTFFHHKYPWIISASDDQTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTEDLVA 153
Query: 177 SGSNDKTVTIWDM 189
S S D+TV +WD+
Sbjct: 154 SASLDQTVRVWDI 166
Score = 122 (48.0 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 36/130 (27%), Positives = 58/130 (44%)
Query: 59 LSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHT 118
+SL+++ + R++G P P T + S + Q+ R+ V E H
Sbjct: 1 MSLLIKFESKS---ARVKGISFHPTRPWVLTSLHSGVI-QLWDYRMCVL---LEKFDEHD 53
Query: 119 SAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASG 178
V + F+H + VSG D +K+W+ CI TL H Y+ F + S
Sbjct: 54 GPVRGICFHHDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIISA 113
Query: 179 SNDKTVTIWD 188
S+D+TV IW+
Sbjct: 114 SDDQTVRIWN 123
Score = 116 (45.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V V F+H + +LVSGS D+ VK+W + + H V+ F + L
Sbjct: 206 HDRGVNWVAFHHTNPILVSGSDDRQVKIWRYNETKAWELDSCRGHYNNVSSVIFHPNADL 265
Query: 175 LASGSNDKTVTIWDM 189
+ S S DK++ +WDM
Sbjct: 266 ILSNSEDKSIRVWDM 280
Score = 64 (27.6 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 180 NDKTVTIWDMLATLLASGSNDKTVTIWDMRGNLSVDV 216
N+ + I+ A L+ S S DK++ +WDM+ S+ V
Sbjct: 252 NNVSSVIFHPNADLILSNSEDKSIRVWDMQKRTSLHV 288
Score = 58 (25.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 21 RGSVHI--GSN--MRCVRFSPDTRLLATGGDDETVTVW 54
R S+ I G N + C +F P L+A+ D+TV VW
Sbjct: 127 RNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVW 164
Score = 56 (24.8 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 193 LLASGSNDKTVTIWDMRGNLSVDVP 217
L+AS S D+TV +WD+ G +P
Sbjct: 151 LVASASLDQTVRVWDISGLRKKQMP 175
Score = 51 (23.0 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
H G +R + F D + +GGDD + VW
Sbjct: 52 HDGP-VRGICFHHDQPIFVSGGDDYKIKVW 80
Score = 46 (21.3 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 193 LLASGSNDKTVTIW 206
+L SGS+D+ V IW
Sbjct: 221 ILVSGSDDRQVKIW 234
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 144 (55.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 33/87 (37%), Positives = 49/87 (56%)
Query: 106 VYGQ-DS-ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
VYG D+ T+ H+ AV + +N S+L S S DKTV +WD + +K L+ HT +V
Sbjct: 96 VYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV 155
Query: 164 TCC-TFSCDDSLLASGSNDKTVTIWDM 189
C L+ +GS+D TV +WD+
Sbjct: 156 NSCYPARRGPQLVCTGSDDGTVKLWDI 182
Score = 143 (55.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 48/172 (27%), Positives = 77/172 (44%)
Query: 20 LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ--GRIEG 77
L+G H G+ M + ++ D +L + D+TV VW S+ + +GHT
Sbjct: 106 LKG--HSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRL--KGHTSFVNSCYP 160
Query: 78 WGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGS 137
R P +C T I + V +T ++T V +V FN S ++SG
Sbjct: 161 ARRGPQL-VCTGSDDGTVKLWDIRKKAAV-----QTF-QNTYQVLAVTFNDTSDQIISGG 213
Query: 138 VDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+D +K+WD+ T+ H VT + S + S L S + D TV +WD+
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV----PSLTCIKTLESHT----RYVT 164
T+ H +VT + + + S L+S ++D TV++WDV P C+K + + + +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 165 CCTFSCDDSLLASGSNDKTVTIWD 188
C++S D S +A+GS D+ V +WD
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWD 314
Score = 109 (43.4 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V +F+ S L S D+ + LW+V C TL+ H+ V ++ D S+
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 175 LASGSNDKTVTIWD 188
L S S DKTV +WD
Sbjct: 125 LFSASTDKTVAVWD 138
Score = 56 (24.8 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 193 LLASGSNDKTVTIWDMRGNLSV 214
L+ +GS+D TV +WD+R +V
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAV 188
Score = 46 (21.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 194 LASGSNDKTVTIWDMR 209
L S + D TV +WD+R
Sbjct: 251 LLSNAMDNTVRVWDVR 266
Score = 46 (21.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 194 LASGSNDKTVTIWDMRGN 211
+ SG D + +WD+R N
Sbjct: 209 IISGGIDNDIKVWDLRQN 226
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 144 (55.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 33/87 (37%), Positives = 49/87 (56%)
Query: 106 VYGQ-DS-ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
VYG D+ T+ H+ AV + +N S+L S S DKTV +WD + +K L+ HT +V
Sbjct: 96 VYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV 155
Query: 164 TCC-TFSCDDSLLASGSNDKTVTIWDM 189
C L+ +GS+D TV +WD+
Sbjct: 156 NSCYPARRGPQLVCTGSDDGTVKLWDI 182
Score = 142 (55.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 47/172 (27%), Positives = 77/172 (44%)
Query: 20 LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ--GRIEG 77
L+G H G+ M + ++ D +L + D+TV VW S+ + +GHT
Sbjct: 106 LKG--HSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRL--KGHTSFVNSCYP 160
Query: 78 WGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGS 137
R P +C T I + + +T ++T V +V FN S ++SG
Sbjct: 161 ARRGPQL-VCTGSDDGTVKLWDIRKKAAI-----QTF-QNTYQVLAVTFNDTSDQIISGG 213
Query: 138 VDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+D +K+WD+ T+ H VT + S + S L S + D TV +WD+
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV----PSLTCIKTLESHT----RYVT 164
T+ H +VT + + + S L+S ++D TV++WDV P C+K + + + +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 165 CCTFSCDDSLLASGSNDKTVTIWD 188
C++S D S +A+GS D+ V +WD
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWD 314
Score = 109 (43.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V +F+ S L S D+ + LW+V C TL+ H+ V ++ D S+
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 175 LASGSNDKTVTIWD 188
L S S DKTV +WD
Sbjct: 125 LFSASTDKTVAVWD 138
Score = 55 (24.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 193 LLASGSNDKTVTIWDMRGNLSV 214
L+ +GS+D TV +WD+R ++
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAI 188
Score = 46 (21.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 194 LASGSNDKTVTIWDMR 209
L S + D TV +WD+R
Sbjct: 251 LLSNAMDNTVRVWDVR 266
Score = 46 (21.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 194 LASGSNDKTVTIWDMRGN 211
+ SG D + +WD+R N
Sbjct: 209 IISGGIDNDIKVWDLRQN 226
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 144 (55.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 33/87 (37%), Positives = 49/87 (56%)
Query: 106 VYGQ-DS-ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
VYG D+ T+ H+ AV + +N S+L S S DKTV +WD + +K L+ HT +V
Sbjct: 96 VYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV 155
Query: 164 TCC-TFSCDDSLLASGSNDKTVTIWDM 189
C L+ +GS+D TV +WD+
Sbjct: 156 NSCYPARRGPQLVCTGSDDGTVKLWDI 182
Score = 142 (55.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 47/172 (27%), Positives = 77/172 (44%)
Query: 20 LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ--GRIEG 77
L+G H G+ M + ++ D +L + D+TV VW S+ + +GHT
Sbjct: 106 LKG--HSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRL--KGHTSFVNSCYP 160
Query: 78 WGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGS 137
R P +C T I + + +T ++T V +V FN S ++SG
Sbjct: 161 ARRGPQL-VCTGSDDGTVKLWDIRKKAAI-----QTF-QNTYQVLAVTFNDTSDQIISGG 213
Query: 138 VDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+D +K+WD+ T+ H VT + S + S L S + D TV +WD+
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV----PSLTCIKTLESHT----RYVT 164
T+ H +VT + + + S L+S ++D TV++WDV P C+K + + + +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 165 CCTFSCDDSLLASGSNDKTVTIWD 188
C++S D S +A+GS D+ V +WD
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWD 314
Score = 109 (43.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V +F+ S L S D+ + LW+V C TL+ H+ V ++ D S+
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 175 LASGSNDKTVTIWD 188
L S S DKTV +WD
Sbjct: 125 LFSASTDKTVAVWD 138
Score = 55 (24.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 193 LLASGSNDKTVTIWDMRGNLSV 214
L+ +GS+D TV +WD+R ++
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAI 188
Score = 46 (21.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 194 LASGSNDKTVTIWDMR 209
L S + D TV +WD+R
Sbjct: 251 LLSNAMDNTVRVWDVR 266
Score = 46 (21.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 194 LASGSNDKTVTIWDMRGN 211
+ SG D + +WD+R N
Sbjct: 209 IISGGIDNDIKVWDLRQN 226
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 144 (55.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 33/87 (37%), Positives = 49/87 (56%)
Query: 106 VYGQ-DS-ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
VYG D+ T+ H+ AV + +N S+L S S DKTV +WD + +K L+ HT +V
Sbjct: 96 VYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV 155
Query: 164 TCC-TFSCDDSLLASGSNDKTVTIWDM 189
C L+ +GS+D TV +WD+
Sbjct: 156 NSCYPARRGPQLVCTGSDDGTVKLWDI 182
Score = 142 (55.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 47/172 (27%), Positives = 77/172 (44%)
Query: 20 LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ--GRIEG 77
L+G H G+ M + ++ D +L + D+TV VW S+ + +GHT
Sbjct: 106 LKG--HSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRL--KGHTSFVNSCYP 160
Query: 78 WGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGS 137
R P +C T I + + +T ++T V +V FN S ++SG
Sbjct: 161 ARRGPQL-VCTGSDDGTVKLWDIRKKAAI-----QTF-QNTYQVLAVTFNDTSDQIISGG 213
Query: 138 VDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+D +K+WD+ T+ H VT + S + S L S + D TV +WD+
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 122 (48.0 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 26/84 (30%), Positives = 48/84 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV----PSLTCIKTLESHT----RYVT 164
T+ H +VT + + + S L+S ++D TV++WDV P C++ + + + +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLL 290
Query: 165 CCTFSCDDSLLASGSNDKTVTIWD 188
C++S D S +A+GS D+ V +WD
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWD 314
Score = 109 (43.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V +F+ S L S D+ + LW+V C TL+ H+ V ++ D S+
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 175 LASGSNDKTVTIWD 188
L S S DKTV +WD
Sbjct: 125 LFSASTDKTVAVWD 138
Score = 55 (24.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 193 LLASGSNDKTVTIWDMRGNLSV 214
L+ +GS+D TV +WD+R ++
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAI 188
Score = 46 (21.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 194 LASGSNDKTVTIWDMR 209
L S + D TV +WD+R
Sbjct: 251 LLSNAMDNTVRVWDVR 266
Score = 46 (21.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 194 LASGSNDKTVTIWDMRGN 211
+ SG D + +WD+R N
Sbjct: 209 IISGGIDNDIKVWDLRQN 226
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 144 (55.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 33/87 (37%), Positives = 49/87 (56%)
Query: 106 VYGQ-DS-ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
VYG D+ T+ H+ AV + +N S+L S S DKTV +WD + +K L+ HT +V
Sbjct: 96 VYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV 155
Query: 164 TCC-TFSCDDSLLASGSNDKTVTIWDM 189
C L+ +GS+D TV +WD+
Sbjct: 156 NSCYPARRGPQLVCTGSDDGTVKLWDI 182
Score = 142 (55.0 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 47/172 (27%), Positives = 77/172 (44%)
Query: 20 LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ--GRIEG 77
L+G H G+ M + ++ D +L + D+TV VW S+ + +GHT
Sbjct: 106 LKG--HSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRL--KGHTSFVNSCYP 160
Query: 78 WGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGS 137
R P +C T I + + +T ++T V +V FN S ++SG
Sbjct: 161 ARRGPQL-VCTGSDDGTVKLWDIRKKAAI-----QTF-QNTYQVLAVTFNDTSDQIISGG 213
Query: 138 VDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+D +K+WD+ T+ H VT + S + S L S + D TV +WD+
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 111 (44.1 bits), Expect = 0.00056, P = 0.00056
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV----PSLTCIKTLESHT----RYVT 164
T+ H +VT + + + S L+S ++D TV++WDV P C+K + + + +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 165 CCTFSCDDSLLASGSNDKTVTIWDMLA 191
C++S D S +A+GS D + W L+
Sbjct: 291 RCSWSPDGSKIAAGSADSFLYPWHSLS 317
Score = 108 (43.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/74 (35%), Positives = 36/74 (48%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V +F+ S L S D+ + LW V C TL+ H+ V ++ D S+
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWSVYG-DCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 175 LASGSNDKTVTIWD 188
L S S DKTV +WD
Sbjct: 125 LFSASTDKTVAVWD 138
Score = 55 (24.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 193 LLASGSNDKTVTIWDMRGNLSV 214
L+ +GS+D TV +WD+R ++
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAI 188
Score = 46 (21.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 194 LASGSNDKTVTIWDMR 209
L S + D TV +WD+R
Sbjct: 251 LLSNAMDNTVRVWDVR 266
Score = 46 (21.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 194 LASGSNDKTVTIWDMRGN 211
+ SG D + +WD+R N
Sbjct: 209 IISGGIDNDIKVWDLRQN 226
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 144 (55.7 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 33/87 (37%), Positives = 49/87 (56%)
Query: 106 VYGQ-DS-ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
VYG D+ T+ H+ AV + +N S+L S S DKTV +WD + +K L+ HT +V
Sbjct: 122 VYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV 181
Query: 164 TCC-TFSCDDSLLASGSNDKTVTIWDM 189
C L+ +GS+D TV +WD+
Sbjct: 182 NSCYPARRGPQLVCTGSDDGTVKLWDI 208
Score = 144 (55.7 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 49/172 (28%), Positives = 77/172 (44%)
Query: 20 LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ--GRIEG 77
L+G H G+ M + ++ D +L + D+TV VW S+ + +GHT
Sbjct: 132 LKG--HSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRL--KGHTSFVNSCYP 186
Query: 78 WGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGS 137
R P +C T I + V +T ++T V +V FN S ++SG
Sbjct: 187 ARRGPQL-VCTGSDDGTVKLWDIRKKAAV-----QTF-QNTYQVLAVTFNDTSDQIISGG 239
Query: 138 VDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+D +K+WD+ T+ H VT + S + S L S + D TV IWD+
Sbjct: 240 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDV 291
Score = 125 (49.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV----PSLTCIKTLESHT----RYVT 164
T+ H +VT + + + S L+S ++D TV++WDV P C+K + + + +
Sbjct: 257 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLL 316
Query: 165 CCTFSCDDSLLASGSNDKTVTIWD 188
C++S D S +A GS D+ V +WD
Sbjct: 317 RCSWSPDGSKIAGGSADRFVYVWD 340
Score = 103 (41.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V +F+ + L S D+ + LW+V C TL+ H+ V ++ D S+
Sbjct: 92 HEGEVYCCKFHPWGNTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHYNTDGSM 150
Query: 175 LASGSNDKTVTIWD 188
L S S DKTV +WD
Sbjct: 151 LFSASTDKTVAVWD 164
Score = 56 (24.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 193 LLASGSNDKTVTIWDMRGNLSV 214
L+ +GS+D TV +WD+R +V
Sbjct: 193 LVCTGSDDGTVKLWDIRKKAAV 214
Score = 47 (21.6 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 194 LASGSNDKTVTIWDMR 209
L S + D TV IWD+R
Sbjct: 277 LLSNAMDNTVRIWDVR 292
Score = 46 (21.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 194 LASGSNDKTVTIWDMRGN 211
+ SG D + +WD+R N
Sbjct: 235 IISGGIDNDIKVWDLRQN 252
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 159 (61.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 56/194 (28%), Positives = 87/194 (44%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT-RVFS 93
FS D + +A+ G D+T+ V++++ ++E + H V C R +
Sbjct: 623 FSEDGQRIASCGADKTLQVFKAETGEKLLEI--KAHED-------EVLCCAFSTDDRFIA 673
Query: 94 TF-VKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSS--LLVSGSVDKTVKLWDVPSL 150
T V + + + G+ T H+ V F + S LL +GS D +KLWD+
Sbjct: 674 TCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQK 733
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKT--VTIWDM 208
C T+ HT V C FS DD LLAS S D T+ +WD + N K + + D
Sbjct: 734 ECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDP 793
Query: 209 RGNLSVDVPLNYCC 222
+ ++ V V CC
Sbjct: 794 QEDMEVIVK---CC 804
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 157 (60.3 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 47/176 (26%), Positives = 82/176 (46%)
Query: 29 NMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC---P 85
++ ++ S D R++A+ D+T+ +W S ++ RGH +G W AC P
Sbjct: 467 DVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVL--RGHRRGV---W----ACSFNP 517
Query: 86 LCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLW 145
R + + I V Q +T+ HT A+ + + + + +VS + D VK+W
Sbjct: 518 FSRQLASGSGDRTIRIWNVDTQ-QCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVW 576
Query: 146 DVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW-DMLATLLASGSND 200
+ S C+ TL++H V D SLL SG D V++W D+ +A + +
Sbjct: 577 SLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEEYIAKQAEE 632
Score = 140 (54.3 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
T+ H V +++ + ++ S S DKT+KLWD + + L H R V C+F+
Sbjct: 460 TIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFS 519
Query: 173 SLLASGSNDKTVTIWDM 189
LASGS D+T+ IW++
Sbjct: 520 RQLASGSGDRTIRIWNV 536
Score = 124 (48.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 117 HTSAVTSVRFN-HKSS-LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSL 174
H ++++ F H+++ +L SG+ D V+LWD+ S + E H+ + TF S
Sbjct: 144 HGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSF 203
Query: 175 LASGSNDKTVTIWDM 189
L SGS DKTV +W++
Sbjct: 204 LLSGSRDKTVQVWNI 218
Score = 99 (39.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 20/84 (23%), Positives = 43/84 (51%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCT 167
G+ +++ H + V ++ + ++LL +G + VK+WD+ + H ++
Sbjct: 93 GRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALC 152
Query: 168 FSCDDS--LLASGSNDKTVTIWDM 189
F + +LASG++D V +WD+
Sbjct: 153 FGKHQNTWVLASGADDSRVRLWDL 176
Score = 57 (25.1 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 192 TLLASGSNDKTVTIWDMRGNLSV-DVPL 218
+ L SGS DKTV +W+++ +V +P+
Sbjct: 202 SFLLSGSRDKTVQVWNIKKRSAVRTIPV 229
Score = 54 (24.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 194 LASGSNDKTVTIWDM 208
LASGS D+T+ IW++
Sbjct: 522 LASGSGDRTIRIWNV 536
Score = 53 (23.7 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW 78
S +R + F P L +G D+TV VW S + T H+ I GW
Sbjct: 190 SVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAV-RTIPVFHSVEAI-GW 238
Score = 47 (21.6 bits), Expect = 7.5e-09, Sum P(3) = 7.5e-09
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 14 NGTEL--ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
+GT++ +L G I + + S D LATG D TV +W
Sbjct: 352 DGTQVFGVLEGHTDI---VLTLDSSEDGVWLATGAKDNTVRLW 391
Score = 46 (21.3 bits), Expect = 9.4e-09, Sum P(3) = 9.4e-09
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 32 CVRFSPDTRLLATGGDDETVTVW 54
C +T +LA+G DD V +W
Sbjct: 152 CFGKHQNTWVLASGADDSRVRLW 174
Score = 41 (19.5 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 192 TLLASGSNDKTVTIW 206
+LL SG D V++W
Sbjct: 604 SLLVSGGADAVVSVW 618
Score = 39 (18.8 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 33 VRFSPDTRLLATGGDDETVTVW 54
V P+ ++L T G+ + W
Sbjct: 239 VNGQPEEKILYTAGEGNLILAW 260
>TAIR|locus:2181733 [details] [associations]
symbol:AT5G02430 "AT5G02430" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AL162971 HOGENOM:HOG000239143
ProtClustDB:CLSN2683085 IPI:IPI00534660 PIR:T48264
RefSeq:NP_195863.1 UniGene:At.54687 ProteinModelPortal:Q9LZ59
SMR:Q9LZ59 PaxDb:Q9LZ59 PRIDE:Q9LZ59 EnsemblPlants:AT5G02430.1
GeneID:831780 KEGG:ath:AT5G02430 TAIR:At5g02430 InParanoid:Q9LZ59
OMA:RRENANS PhylomeDB:Q9LZ59 Genevestigator:Q9LZ59 Uniprot:Q9LZ59
Length = 905
Score = 158 (60.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 50/175 (28%), Positives = 84/175 (48%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLI---------METNDRGHTQGRIEG-WGRVP 82
++FSPD+ LLA+ G+D + VW + ++ + + G T EG V
Sbjct: 417 MKFSPDSHLLASAGEDCAIHVWEVQECEIMSMNEGSLTPIHPSMSGSTDKSSEGDAAEVS 476
Query: 83 ACPLCRTRVFSTFVKQIIPTRVG----VYGQDSETVGR---HTSAVTSVRFNHKSSLLVS 135
+ + + IP V V+ + + H V + ++ +S LL+S
Sbjct: 477 QDKKKKGKTSMSKKGNQIPDYVHAPETVFSLSDKPICSFTGHLDDVLDLSWS-RSQLLLS 535
Query: 136 GSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFS-CDDSLLASGSNDKTVTIWDM 189
S+DKTV+LWD+ + +C+K L +H YVTC F+ D+ SGS D + IW++
Sbjct: 536 SSMDKTVRLWDIETQSCLK-LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNI 589
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 159 (61.0 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 56/194 (28%), Positives = 87/194 (44%)
Query: 35 FSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT-RVFS 93
FS D + +A+ G D+T+ V++++ ++E + H V C R +
Sbjct: 623 FSEDGQRIASCGADKTLQVFKAETGEKLLEI--KAHED-------EVLCCAFSTDDRFIA 673
Query: 94 TF-VKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSS--LLVSGSVDKTVKLWDVPSL 150
T V + + + G+ T H+ V F + S LL +GS D +KLWD+
Sbjct: 674 TCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQK 733
Query: 151 TCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLATLLASGSNDKT--VTIWDM 208
C T+ HT V C FS DD LLAS S D T+ +WD + N K + + D
Sbjct: 734 ECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDP 793
Query: 209 RGNLSVDVPLNYCC 222
+ ++ V V CC
Sbjct: 794 QEDMEVIVK---CC 804
Score = 144 (55.7 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 42/158 (26%), Positives = 71/158 (44%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSD-DLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRV 91
++F+ D + L + DD + VW D + + RGH Q ++ + R+ L +R+
Sbjct: 1009 IQFTADEKTLISSSDDAEIQVWNWQLDKCIFL----RGH-QETVKDF-RL----LKNSRL 1058
Query: 92 FSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLT 151
S + + G + H V S +H ++ S S DKT K+W L
Sbjct: 1059 LSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWSFDLLL 1118
Query: 152 CIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+ L H V C FS D +LLA+G ++ + IW++
Sbjct: 1119 PLHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNV 1156
Score = 115 (45.5 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
HT AV F+ + S DKT++++ + + +++H V CC FS DD +A
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIA 673
Query: 177 SGSNDKTVTIWDML 190
+ S DK V IW+ +
Sbjct: 674 TCSVDKKVKIWNSM 687
Score = 44 (20.5 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 191 ATLLASGSNDKTVTIWDM-RGNL 212
+TLLA+G ++ + IW++ G L
Sbjct: 1139 STLLATGDDNGEIRIWNVSNGEL 1161
Score = 42 (19.8 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 191 ATLLASGSNDKTVTIW 206
AT +S S DKT IW
Sbjct: 1097 ATKFSSTSADKTAKIW 1112
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 156 (60.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLC 87
S++ C RFSPD + L TG D + VW + + + Q C +C
Sbjct: 215 SHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDL--KYQAQDNFMMMDDAVLC-MC 271
Query: 88 RTRVFSTFVKQIIPTRVGVYG-QDSETVGR----HTSAVTSVRFNHKSSLLVSGSVDKTV 142
+R ++ V+ Q + + R H+ VT + F+ SS ++S S D+T+
Sbjct: 272 FSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTI 331
Query: 143 KLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT 192
++ + S +K H+ +V TF+ D + S S+D TV +W++ T
Sbjct: 332 RIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKTT 381
Score = 122 (48.0 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 35/129 (27%), Positives = 56/129 (43%)
Query: 32 CVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCR--T 89
C+ FS DT +LATG D + VW+ + +R H++G V + +
Sbjct: 269 CMCFSRDTEMLATGAQDGKIKVWKIQS-GQCLRRFERAHSKG-------VTCLSFSKDSS 320
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
++ S Q I G+ + H+S V F ++S S D TVK+W+V +
Sbjct: 321 QILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKT 380
Query: 150 LTCIKTLES 158
C T +S
Sbjct: 381 TECSNTFKS 389
Score = 36 (17.7 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 154 KTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+TL H + V +L+A+ S D + +W
Sbjct: 478 RTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 152 (58.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + + +V F+ LL + D +V LWD+ + +K ++ HT+ V FSCD S+LA
Sbjct: 804 HRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILA 863
Query: 177 SGSNDKTVTIWDMLATLLASGSNDKTVTIWD 207
SGS+D TV +WD+ +S S + I D
Sbjct: 864 SGSSDCTVRLWDVKKAFNSSLSTQPSSLIND 894
Score = 146 (56.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 54/212 (25%), Positives = 91/212 (42%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE----GWGR 80
H G C FSPD++ L + +D T +W + +S ++ + G+
Sbjct: 678 HSGPVYGC-SFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYF 736
Query: 81 VPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDK 140
A R+++T I P R+ G H S +VRF+ + L +GS DK
Sbjct: 737 ATASHDRTARLWTT--NHISPLRI--------FTG-HLSDCNTVRFHPNINYLATGSNDK 785
Query: 141 TVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLA--------- 191
+ +LW++ + C++ H + FS D LLA+ D +V +WD+
Sbjct: 786 SARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDG 845
Query: 192 --------------TLLASGSNDKTVTIWDMR 209
++LASGS+D TV +WD++
Sbjct: 846 HTKCVYSLDFSCDGSILASGSSDCTVRLWDVK 877
Score = 45 (20.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 36 SPDTRLLATGGDDETVTVWRSDDL 59
S D +L+A G D +V +W ++
Sbjct: 567 SKDAQLVAGGFSDSSVKIWNLKEM 590
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 145 (56.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 49/174 (28%), Positives = 76/174 (43%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R VR + + AT +D+T+ VW ++ +E D HT I W A
Sbjct: 238 VRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECI-AWAPEAAASAINE 296
Query: 90 RVFST---------FV------KQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
+ F+ K I V V G T+ H + V + F+ LV
Sbjct: 297 AAGADNKKGHHQGPFLASGSRDKTIRIWDVSV-GLCLLTLSGHDNWVRGLAFHPGGKYLV 355
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
S S DKT+++WD+ + C+KTL +H + T F + SGS D+TV +W+
Sbjct: 356 SASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 138 (53.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 127 NHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTI 186
+H+ L SGS DKT+++WDV C+ TL H +V F L S S+DKT+ +
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Query: 187 WDM 189
WD+
Sbjct: 366 WDL 368
Score = 136 (52.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 43/167 (25%), Positives = 75/167 (44%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG----RIEGWGR 80
H S R + F P L+ + +D T+ +W D + E + +GHT + G+
Sbjct: 107 HRASITRVI-FHPIFALMVSASEDATIRIW--DFETGEYERSLKGHTDSVQDVAFDAQGK 163
Query: 81 VPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDK 140
+ A + +Q ++G D H V+SV F ++S S D+
Sbjct: 164 LLASCSADLSIKLWDFQQSYECIKTMHGHD------HN--VSSVAFVPAGDYVLSASRDR 215
Query: 141 TVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
T+K+W+V + C+KT H +V + S+ A+ SND+T+ +W
Sbjct: 216 TIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW 262
Score = 135 (52.6 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 28/83 (33%), Positives = 44/83 (53%)
Query: 108 GQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVP-SLTCIKTLESHTRYVTCC 166
G+ ++ HT +V V F+ + LL S S D ++KLWD S CIKT+ H V+
Sbjct: 140 GEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSV 199
Query: 167 TFSCDDSLLASGSNDKTVTIWDM 189
F + S S D+T+ +W++
Sbjct: 200 AFVPAGDYVLSASRDRTIKMWEV 222
Score = 119 (46.9 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H +++T V F+ +L+VS S D T+++WD + ++L+ HT V F LLA
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLA 166
Query: 177 SGSNDKTVTIWD 188
S S D ++ +WD
Sbjct: 167 SCSADLSIKLWD 178
Score = 58 (25.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 194 LASGSNDKTVTIWDMR 209
L S S+DKT+ +WD+R
Sbjct: 354 LVSASDDKTIRVWDLR 369
Score = 46 (21.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 196 SGSNDKTVTIWDMR 209
SGS D+TV +W+ R
Sbjct: 398 SGSVDQTVKVWECR 411
Score = 43 (20.2 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 192 TLLASGSNDKTVTIW 206
++ A+ SND+T+ +W
Sbjct: 248 SIFATCSNDQTIRVW 262
Score = 38 (18.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 196 SGSNDKTVTIWDM 208
S S D+T+ +W++
Sbjct: 210 SASRDRTIKMWEV 222
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 131 (51.2 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 48/164 (29%), Positives = 76/164 (46%)
Query: 41 LLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVFSTFVKQI- 99
LL TG DETV +WR D+L L+ TN GH+ G + P+ + + +FV+
Sbjct: 32 LLLTGSLDETVKLWRPDELDLV-RTNT-GHSLG-VAALAAHPSGIIAASSSIDSFVRVFD 88
Query: 100 IPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLL-VSGSVDKTVKLWDVPSLTCIKTLE- 157
+ T + ++ S V ++F K ++L V+G +VKLWD S I TL
Sbjct: 89 VDTNATIAVLEAPP-----SEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSI 143
Query: 158 ------------SHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
S ++V +S + LA GS D T+ ++D+
Sbjct: 144 PRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDV 187
Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
Identities = 48/171 (28%), Positives = 80/171 (46%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRTRVF 92
V +SP+ + LA G D T+ V+ D L+ + GH P+ R+ VF
Sbjct: 164 VAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLE--GHNM------------PV-RSLVF 208
Query: 93 STFVKQIIPT-----RVGVYGQDSETV-GR---HTSAVTSVRFNHKSSLLVSGSVDKTVK 143
S +++ + V ++ + +T+ G HTS V SV + + +GS D+TV+
Sbjct: 209 SPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVR 268
Query: 144 LWDVPSLTCIKTLESHTRYVTCCTFSCDDSL------LASGSNDKTVTIWD 188
LWD+ I+T+ +H V F LAS S+DK+V+++D
Sbjct: 269 LWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGRLASVSDDKSVSLYD 319
Score = 110 (43.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 30/96 (31%), Positives = 47/96 (48%)
Query: 117 HTSAVTSVRFNHKSS-LLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLL 175
H V S+ F+ +L SGS D V + D T + ++ HT +V S D +
Sbjct: 199 HNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAI 258
Query: 176 ASGSNDKTVTIWDM---LATLLASGSNDKTVTIWDM 208
A+GS+D+TV +WD+ A S ND+ +W +
Sbjct: 259 ATGSSDRTVRLWDLKMRAAIQTMSNHNDQ---VWSV 291
Score = 61 (26.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNY 220
+A+GS+D+TV +WD++ ++ N+
Sbjct: 258 IATGSSDRTVRLWDLKMRAAIQTMSNH 284
Score = 41 (19.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 33 VRFSPDTRLLAT-GGDDETVTVWRSDDLSLI 62
++F P +LA GG +V +W + LI
Sbjct: 108 MQFEPKGTILAVAGGSSASVKLWDTASWRLI 138
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 150 (57.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + + F+H+ ++S S D+T+++W+ S TC+ L H YV C F + L+
Sbjct: 92 HLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVV 151
Query: 177 SGSNDKTVTIWDMLATLLASGSNDKTVTIWDMRGNLSVDV 216
S S D+TV +WD ++ L + V D+RG VD+
Sbjct: 152 SASLDQTVRVWD-ISGLRKKNLSPGAVES-DVRGITGVDL 189
Score = 114 (45.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 24/75 (32%), Positives = 36/75 (48%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V F+ L+VSG+ D+ VK+W + + T H V+C F L
Sbjct: 204 HDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQEL 263
Query: 175 LASGSNDKTVTIWDM 189
+ S S DK++ +WDM
Sbjct: 264 ILSNSEDKSIRVWDM 278
Score = 58 (25.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETN-DRGHTQGRIEG 77
+L G H + C +F P L+ + D+TV VW D+S + + N G + + G
Sbjct: 130 VLTGHNHY---VMCAQFHPSEDLVVSASLDQTVRVW---DISGLRKKNLSPGAVESDVRG 183
Score = 50 (22.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 18 LILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
LI + H G +R + F L +GGDD + VW
Sbjct: 43 LIDKFDEHDGP-VRGIDFHKQQPLFVSGGDDYKIKVW 78
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 147 (56.8 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 45/166 (27%), Positives = 74/166 (44%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLC 87
S + V F P + T + + +W + +++ D GH G + G P PL
Sbjct: 12 SRAKGVAFHPTQPWILTSLHNGRIQLW-DYRMGTLLDRFD-GH-DGPVRGIAFHPTQPL- 67
Query: 88 RTRVFSTFVKQIIPTRVGVYGQDSE----TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVK 143
FV +V V+ S ++ H V F+H+ ++S S D+T++
Sbjct: 68 -------FVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIR 120
Query: 144 LWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+W+ S CI L H+ YV C F + L+ S S D+TV +WD+
Sbjct: 121 IWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDI 166
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 24/75 (32%), Positives = 36/75 (48%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V F+ L++S D+ VKLW + + + T H V+CC F L
Sbjct: 211 HDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQEL 270
Query: 175 LASGSNDKTVTIWDM 189
+ S S DKT+ +WD+
Sbjct: 271 ILSASEDKTIRVWDL 285
Score = 55 (24.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 193 LLASGSNDKTVTIWDMRGNLSV 214
L+ S S DKT+ +WD+ +V
Sbjct: 270 LILSASEDKTIRVWDLNRRTAV 291
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 150 (57.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + + F+H+ ++S S D+T+++W+ S TC+ L H YV C F + L+
Sbjct: 92 HLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVV 151
Query: 177 SGSNDKTVTIWDMLATLLASGSNDKTVTIWDMRGNLSVDV 216
S S D+TV +WD ++ L + V D+RG VD+
Sbjct: 152 SASLDQTVRVWD-ISGLRKKNLSPGAVES-DVRGITGVDL 189
Score = 114 (45.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 24/75 (32%), Positives = 36/75 (48%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V F+ L+VSG+ D+ VK+W + + T H V+C F L
Sbjct: 204 HDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQEL 263
Query: 175 LASGSNDKTVTIWDM 189
+ S S DK++ +WDM
Sbjct: 264 ILSNSEDKSIRVWDM 278
Score = 58 (25.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETN-DRGHTQGRIEG 77
+L G H + C +F P L+ + D+TV VW D+S + + N G + + G
Sbjct: 130 VLTGHNHY---VMCAQFHPSEDLVVSASLDQTVRVW---DISGLRKKNLSPGAVESDVRG 183
Score = 50 (22.7 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 18 LILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
LI + H G +R + F L +GGDD + VW
Sbjct: 43 LIDKFDEHDGP-VRGIDFHKQQPLFVSGGDDYKIKVW 78
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 198 SNDKTVTIWDMRGNLSVD 215
+N+K V + DMRG S D
Sbjct: 775 TNEKEVKLADMRGFSSPD 792
Score = 40 (19.1 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 8/41 (19%), Positives = 16/41 (39%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGH 70
+R F + + + DD+T+ VW + + H
Sbjct: 96 IRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNH 136
>TAIR|locus:2090146 [details] [associations]
symbol:AT3G15470 "AT3G15470" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AB022218 EMBL:AC024081 HOGENOM:HOG000239143
EMBL:AF372960 EMBL:AY081717 IPI:IPI00541904 RefSeq:NP_566515.1
UniGene:At.11977 UniGene:At.48664 ProteinModelPortal:Q9LDG7
SMR:Q9LDG7 STRING:Q9LDG7 PaxDb:Q9LDG7 PRIDE:Q9LDG7
EnsemblPlants:AT3G15470.1 GeneID:820786 KEGG:ath:AT3G15470
TAIR:At3g15470 InParanoid:Q9LDG7 OMA:GMASTEN PhylomeDB:Q9LDG7
ProtClustDB:CLSN2917135 Genevestigator:Q9LDG7 Uniprot:Q9LDG7
Length = 883
Score = 156 (60.0 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 56/176 (31%), Positives = 87/176 (49%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETN-DRGH-----TQGRIEGW 78
H GS + ++FS D + LA+ G+D + +W+ + E DR T G E
Sbjct: 412 HNGS-IWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKGELLLDRPELLLLATNGSPEPT 470
Query: 79 GRVPACPLCRTRVF--STFVKQI-IPTRV-GVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
P RT + S ++ I +P + G+ + + H V + ++ KS L+
Sbjct: 471 TMSPR-RRGRTSISRKSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWS-KSQHLL 528
Query: 135 SGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFS-CDDSLLASGSNDKTVTIWDM 189
S S+DKTV+LW++ S TC+K SH+ YVTC F+ DD SGS D V +W +
Sbjct: 529 SSSMDKTVRLWNLSSQTCLKVF-SHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSI 583
Score = 36 (17.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 196 SGSNDKTVTIWDMRGNLSVD 215
SGS D V +W + VD
Sbjct: 571 SGSLDAKVRVWSIPDRQVVD 590
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 150 (57.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + + F+H+ ++S S D+T+++W+ S TC+ L H YV C F + L+
Sbjct: 82 HLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVV 141
Query: 177 SGSNDKTVTIWDMLATLLASGSNDKTVTIWDMRGNLSVDV 216
S S D+TV +WD ++ L + V D+RG VD+
Sbjct: 142 SASLDQTVRVWD-ISGLRKKNLSPGAVES-DVRGITGVDL 179
Score = 114 (45.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 24/75 (32%), Positives = 36/75 (48%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V F+ L+VSG+ D+ VK+W + + T H V+C F L
Sbjct: 194 HDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQEL 253
Query: 175 LASGSNDKTVTIWDM 189
+ S S DK++ +WDM
Sbjct: 254 ILSNSEDKSIRVWDM 268
Score = 58 (25.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETN-DRGHTQGRIEG 77
+L G H + C +F P L+ + D+TV VW D+S + + N G + + G
Sbjct: 120 VLTGHNHY---VMCAQFHPSEDLVVSASLDQTVRVW---DISGLRKKNLSPGAVESDVRG 173
Score = 50 (22.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 18 LILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
LI + H G +R + F L +GGDD + VW
Sbjct: 33 LIDKFDEHDGP-VRGIDFHKQQPLFVSGGDDYKIKVW 68
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 150 (57.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + + F+H+ ++S S D+T+++W+ S TC+ L H YV C F + L+
Sbjct: 92 HLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVV 151
Query: 177 SGSNDKTVTIWDMLATLLASGSNDKTVTIWDMRGNLSVDV 216
S S D+TV +WD ++ L + V D+RG VD+
Sbjct: 152 SASLDQTVRVWD-ISGLRKKNLSPGAVES-DVRGITGVDL 189
Score = 114 (45.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 24/75 (32%), Positives = 36/75 (48%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V F+ L+VSG+ D+ VK+W + + T H V+C F L
Sbjct: 204 HDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQEL 263
Query: 175 LASGSNDKTVTIWDM 189
+ S S DK++ +WDM
Sbjct: 264 ILSNSEDKSIRVWDM 278
Score = 58 (25.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETN-DRGHTQGRIEG 77
+L G H + C +F P L+ + D+TV VW D+S + + N G + + G
Sbjct: 130 VLTGHNHY---VMCAQFHPSEDLVVSASLDQTVRVW---DISGLRKKNLSPGAVESDVRG 183
Score = 50 (22.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 18 LILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
LI + H G +R + F L +GGDD + VW
Sbjct: 43 LIDKFDEHDGP-VRGIDFHKQQPLFVSGGDDYKIKVW 78
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 150 (57.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + + F+H+ ++S S D+T+++W+ S TC+ L H YV C F + L+
Sbjct: 92 HLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVV 151
Query: 177 SGSNDKTVTIWDMLATLLASGSNDKTVTIWDMRGNLSVDV 216
S S D+TV +WD ++ L + V D+RG VD+
Sbjct: 152 SASLDQTVRVWD-ISGLRKKNLSPGAVES-DVRGITGVDL 189
Score = 114 (45.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 24/75 (32%), Positives = 36/75 (48%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V F+ L+VSG+ D+ VK+W + + T H V+C F L
Sbjct: 204 HDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQEL 263
Query: 175 LASGSNDKTVTIWDM 189
+ S S DK++ +WDM
Sbjct: 264 ILSNSEDKSIRVWDM 278
Score = 58 (25.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETN-DRGHTQGRIEG 77
+L G H + C +F P L+ + D+TV VW D+S + + N G + + G
Sbjct: 130 VLTGHNHY---VMCAQFHPSEDLVVSASLDQTVRVW---DISGLRKKNLSPGAVESDVRG 183
Score = 50 (22.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 18 LILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
LI + H G +R + F L +GGDD + VW
Sbjct: 43 LIDKFDEHDGP-VRGIDFHKQQPLFVSGGDDYKIKVW 78
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 150 (57.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + + F+H+ ++S S D+T+++W+ S TC+ L H YV C F + L+
Sbjct: 92 HLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVV 151
Query: 177 SGSNDKTVTIWDMLATLLASGSNDKTVTIWDMRGNLSVDV 216
S S D+TV +WD ++ L + V D+RG VD+
Sbjct: 152 SASLDQTVRVWD-ISGLRKKNLSPGAVES-DVRGITGVDL 189
Score = 114 (45.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 24/75 (32%), Positives = 36/75 (48%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V F+ L+VSG+ D+ VK+W + + T H V+C F L
Sbjct: 204 HDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQEL 263
Query: 175 LASGSNDKTVTIWDM 189
+ S S DK++ +WDM
Sbjct: 264 ILSNSEDKSIRVWDM 278
Score = 58 (25.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETN-DRGHTQGRIEG 77
+L G H + C +F P L+ + D+TV VW D+S + + N G + + G
Sbjct: 130 VLTGHNHY---VMCAQFHPSEDLVVSASLDQTVRVW---DISGLRKKNLSPGAVESDVRG 183
Score = 50 (22.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 18 LILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
LI + H G +R + F L +GGDD + VW
Sbjct: 43 LIDKFDEHDGP-VRGIDFHKQQPLFVSGGDDYKIKVW 78
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 150 (57.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + + F+H+ ++S S D+T+++W+ S TC+ L H YV C F + L+
Sbjct: 92 HLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVV 151
Query: 177 SGSNDKTVTIWDMLATLLASGSNDKTVTIWDMRGNLSVDV 216
S S D+TV +WD ++ L + V D+RG VD+
Sbjct: 152 SASLDQTVRVWD-ISGLRKKNLSPGAVES-DVRGITGVDL 189
Score = 114 (45.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 24/75 (32%), Positives = 36/75 (48%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V F+ L+VSG+ D+ VK+W + + T H V+C F L
Sbjct: 204 HDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQEL 263
Query: 175 LASGSNDKTVTIWDM 189
+ S S DK++ +WDM
Sbjct: 264 ILSNSEDKSIRVWDM 278
Score = 58 (25.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETN-DRGHTQGRIEG 77
+L G H + C +F P L+ + D+TV VW D+S + + N G + + G
Sbjct: 130 VLTGHNHY---VMCAQFHPSEDLVVSASLDQTVRVW---DISGLRKKNLSPGAVESDVRG 183
Score = 50 (22.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 18 LILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVW 54
LI + H G +R + F L +GGDD + VW
Sbjct: 43 LIDKFDEHDGP-VRGIDFHKQQPLFVSGGDDYKIKVW 78
>TAIR|locus:2085929 [details] [associations]
symbol:AT3G18950 "AT3G18950" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AP000735
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005434
EMBL:AK117650 IPI:IPI00535619 RefSeq:NP_188525.1 UniGene:At.38474
ProteinModelPortal:Q9LJ71 SMR:Q9LJ71 STRING:Q9LJ71
EnsemblPlants:AT3G18950.1 GeneID:821427 KEGG:ath:AT3G18950
TAIR:At3g18950 InParanoid:Q9LJ71 OMA:LAINQES PhylomeDB:Q9LJ71
Genevestigator:Q9LJ71 Uniprot:Q9LJ71
Length = 473
Score = 137 (53.3 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 38/121 (31%), Positives = 63/121 (52%)
Query: 68 RGHTQGRIEGWGRVPACPLCRTRVFSTFVKQIIPTR-VGVYGQDSETVGRHTSAVTSVRF 126
RG ++ R G+ R+ + P + F T K + P V V + + RH AV+ +
Sbjct: 203 RG-SKRRTGGYSRIGSLPTLKE--FLT--KSVNPKNYVEVRRRKNVLKIRHYDAVSCLSL 257
Query: 127 NHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTI 186
N + LL SGS DKT+K+W + C++++++H + DD LL +GS D T+ +
Sbjct: 258 NEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDD-LLFTGSADGTLKV 316
Query: 187 W 187
W
Sbjct: 317 W 317
Score = 44 (20.5 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 192 TLLASGSNDKTVTIWDMRGN 211
+L+ SG DK + +W G+
Sbjct: 392 SLVLSGGADKNICVWRRNGD 411
Score = 44 (20.5 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 41 LLATGGDDETVTVWR-----------SDDLSLIMETNDR----GHTQGRIEGW 78
LL TG D + + VW+ S + I+ T D GH G+I W
Sbjct: 150 LLFTGSDSKNIRVWKDLKDHTGFKSTSGLVKAIVITGDNRIFTGHQDGKIRVW 202
Score = 40 (19.1 bits), Expect = 6.9e-09, Sum P(3) = 6.9e-09
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWR 55
++ + + D R+ TG D + VWR
Sbjct: 179 VKAIVITGDNRIF-TGHQDGKIRVWR 203
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 144 (55.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 33/87 (37%), Positives = 49/87 (56%)
Query: 106 VYGQ-DS-ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYV 163
VYG D+ T+ H+ AV + +N S+L S S DKTV +WD + +K L+ HT +V
Sbjct: 95 VYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV 154
Query: 164 TCC-TFSCDDSLLASGSNDKTVTIWDM 189
C L+ +GS+D TV +WD+
Sbjct: 155 NSCYPARRGPQLVCTGSDDGTVKLWDI 181
Score = 142 (55.0 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 47/172 (27%), Positives = 77/172 (44%)
Query: 20 LRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ--GRIEG 77
L+G H G+ M + ++ D +L + D+TV VW S+ + +GHT
Sbjct: 105 LKG--HSGAVME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRL--KGHTSFVNSCYP 159
Query: 78 WGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGS 137
R P +C T I + + +T ++T V +V FN S ++SG
Sbjct: 160 ARRGPQL-VCTGSDDGTVKLWDIRKKAAI-----QTF-QNTYQVLAVTFNDTSDQIISGG 212
Query: 138 VDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+D +K+WD+ T+ H VT + S + S L S + D TV +WD+
Sbjct: 213 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 125 (49.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDV----PSLTCIKTLESHT----RYVT 164
T+ H +VT + + + S L+S ++D TV++WDV P C+K + + + +
Sbjct: 230 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 289
Query: 165 CCTFSCDDSLLASGSNDKTVTIWD 188
C++S D S +A+GS D+ V +WD
Sbjct: 290 RCSWSPDGSKIAAGSADRFVYVWD 313
Score = 109 (43.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTC--IKTLESHTRYVTCCTFSCDDSL 174
H V +F+ S L S D+ + LW+V C TL+ H+ V ++ D S+
Sbjct: 65 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 175 LASGSNDKTVTIWD 188
L S S DKTV +WD
Sbjct: 124 LFSASTDKTVAVWD 137
Score = 55 (24.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 193 LLASGSNDKTVTIWDMRGNLSV 214
L+ +GS+D TV +WD+R ++
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAI 187
Score = 46 (21.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 194 LASGSNDKTVTIWDMR 209
L S + D TV +WD+R
Sbjct: 250 LLSNAMDNTVRVWDVR 265
Score = 46 (21.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 194 LASGSNDKTVTIWDMRGN 211
+ SG D + +WD+R N
Sbjct: 208 IISGGIDNDIKVWDLRQN 225
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 140 (54.3 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 43/169 (25%), Positives = 71/169 (42%)
Query: 23 SVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVP 82
S H+G +RC+ P ATG D + +W D S ++ + GH + G
Sbjct: 169 SGHLGW-VRCIAVEPGNEWFATGAGDRVIKIW--DLASGKLKLSLTGHVS-TVRGVAVST 224
Query: 83 ACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTV 142
P +FS + + Y + H SAV S+ + +L + D T
Sbjct: 225 KHPY----LFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTA 280
Query: 143 KLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLA 191
++WD+ + + TL HT V + + +GS+D TV +WD+ A
Sbjct: 281 RIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAA 329
Score = 54 (24.1 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 194 LASGSNDKTVTIWDMRGNLSVDVPLNY 220
+ +GS+D TV +WD+ SV N+
Sbjct: 313 IITGSHDSTVRLWDLAAGKSVCTLTNH 339
Score = 40 (19.1 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 193 LLASGSNDKTVTIWDMR 209
+L SG ++ T+ WD R
Sbjct: 394 VLVSGGDNGTMFFWDWR 410
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 135 (52.6 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 32/77 (41%), Positives = 43/77 (55%)
Query: 113 TVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDD 172
TV AV +VRFN + L++ DK++KLW V T +KT H V S D+
Sbjct: 20 TVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYDN 79
Query: 173 SLLASGSNDKTVTIWDM 189
S L S S+DKTV +WD+
Sbjct: 80 SQLCSCSSDKTVILWDV 96
Score = 134 (52.2 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 44/162 (27%), Positives = 78/162 (48%)
Query: 30 MRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLCRT 89
+R VRF+ D L T G D+++ +W S +++T GH ++ G LC
Sbjct: 28 VRAVRFNADGNYLLTCGSDKSLKLW-SVSRGTLLKTYS-GHGYEVLDADGSYDNSQLCSC 85
Query: 90 RVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPS 149
T + + + GQ + + H V V+FN ++++++SGS+D TV+ WD S
Sbjct: 86 SSDKTVILWDVAS-----GQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRS 140
Query: 150 --LTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
+ I+ L+ ++ S + LL +GS D V +D+
Sbjct: 141 RRMEPIQILDESQDGISSLKVS-EHELL-TGSVDGRVRRYDL 180
Score = 54 (24.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 191 ATLLASGSNDKTVTIWDMR 209
AT++ SGS D TV WD R
Sbjct: 121 ATVMLSGSIDGTVRCWDTR 139
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 158 (60.7 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 52/195 (26%), Positives = 88/195 (45%)
Query: 25 HIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPAC 84
H+ + +RCV++ D +L+ +G D V +W + + +GHT RV +
Sbjct: 1114 HLAA-VRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTL--QGHTN-------RVYSL 1161
Query: 85 PLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKL 144
V S + I G T+ H S + + + ++LVSG+ D TVK+
Sbjct: 1162 QFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMEL--RQNILVSGNADSTVKV 1219
Query: 145 WDVPSLTCIKTLES---HTRYVTCCTFSCDDSLLASGSNDKTVTIWDM-----LATLLAS 196
WD+ + C++TL H VTC F+ + + S+D TV +WD+ + L+A
Sbjct: 1220 WDITTGQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKLWDVKTGDFIRNLVAL 1277
Query: 197 GSNDKTVTIWDMRGN 211
S +W +R N
Sbjct: 1278 DSGGSGGVVWRIRAN 1292
Score = 149 (57.5 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 106 VYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTC 165
V G+ T+ HT V S + + ++++SGS D+T+K+WD+ S C+ TL+ HT V C
Sbjct: 1023 VNGKCLRTLVGHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRC 1080
Query: 166 CTFSCDDSLLASGSNDKTVTIWDM 189
S + SGS D T+ +WD+
Sbjct: 1081 --MHLHGSKVVSGSRDATLRVWDI 1102
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 46/169 (27%), Positives = 76/169 (44%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW 78
+L+G H + C++FS + + +G DD T+ VW + + + GHT G W
Sbjct: 989 VLKG--HDDHVITCLQFSGNR--IVSGSDDNTLKVWSAVNGKCLRTLV--GHTGGV---W 1039
Query: 79 GRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSV 138
+ + + S + + G T+ HTS V + + S +VSGS
Sbjct: 1040 ----SSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSR 1093
Query: 139 DKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
D T+++WD+ +C+ L H V C + D L+ SG+ D V IW
Sbjct: 1094 DATLRVWDIEQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIW 1140
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 147 (56.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 46/167 (27%), Positives = 75/167 (44%)
Query: 28 SNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGWGRVPACPLC 87
+ ++CV F P TRLLA G ++ D +LI + + G V +
Sbjct: 261 AKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLS---------MGQNPVNTVSVN 311
Query: 88 RTRVFSTFVKQIIPTRVGVYGQDSETV----GRHTSAVTSVRFNHKSSLLVSGSVDKTVK 143
+T + F + + VY SE+ H + S+ ++ S +V+ S D +K
Sbjct: 312 QTGEWLAFGSSKLGQLL-VYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKIK 370
Query: 144 LWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDML 190
+WD+ S C+ T E HT VT F+ ++ S S D TV WD++
Sbjct: 371 VWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLI 417
Score = 103 (41.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 132 LLVSGSVDK-TVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDM 189
++ +GS+D + +W V + + L H V+C +FS ++S+LAS S DKT+ IW +
Sbjct: 444 VVCAGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSI 502
Score = 57 (25.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 27/132 (20%), Positives = 48/132 (36%)
Query: 25 HIGSNMRC--VRFSPDTRLLATGGDDETVTVWRSDDLS-------LIMETNDRGHTQGRI 75
H +C V+FSPD RL A + +W++ D++ + GH Q
Sbjct: 92 HFNFKEKCSAVKFSPDGRLFALASG-RFLQIWKTPDVNKDRQFAPFVRHRVHAGHFQDIT 150
Query: 76 E-GWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLV 134
W + L ++ S + + + + T H V F+H +
Sbjct: 151 SLTWSQDSRFILTTSKDLSAKIWSVDSEEKNLA---ATTFNGHRDYVMGAFFSHDQEKIY 207
Query: 135 SGSVDKTVKLWD 146
+ S D V +W+
Sbjct: 208 TVSKDGAVFVWE 219
Score = 51 (23.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 192 TLLASGSNDKTVTIWDMRG 210
++LAS S DKT+ IW + G
Sbjct: 486 SVLASASWDKTIRIWSIFG 504
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 145 (56.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 53/166 (31%), Positives = 79/166 (47%)
Query: 33 VRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQG----RIEGWGRVPA-CPLC 87
V F P L+ + +D T+ VW D + E +GHT + G++ A C
Sbjct: 114 VIFHPVFSLMVSASEDATIKVW--DYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSAD 171
Query: 88 RTRVFSTFVK-QIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWD 146
T F + I T ++G D H V+SV +VS S DKT+K+W+
Sbjct: 172 MTIKLWDFQGFECIRT---MHGHD------HN--VSSVAIMPNGDHIVSASRDKTMKMWE 220
Query: 147 VPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWDMLAT 192
V + C+KT H +V + D +LLAS SND+TV +W ++AT
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW-VVAT 265
Score = 133 (51.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 31/72 (43%), Positives = 41/72 (56%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H S VT V F+ SL+VS S D T+K+WD + +TL+ HT V +F LLA
Sbjct: 107 HRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLA 166
Query: 177 SGSNDKTVTIWD 188
S S D T+ +WD
Sbjct: 167 SCSADMTIKLWD 178
Score = 130 (50.8 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 114 VGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDS 173
VG H + V V F+ +VS + DKT+++WD + C+KTL +H +VT F
Sbjct: 335 VG-HDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASP 393
Query: 174 LLASGSNDKTVTIWD 188
+ +GS D+TV +W+
Sbjct: 394 YVVTGSVDQTVKVWE 408
Score = 123 (48.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 53/196 (27%), Positives = 81/196 (41%)
Query: 17 ELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIE 76
E L+G H S ++ + F +LLA+ D T+ +W I + H
Sbjct: 143 ERTLKG--HTDS-VQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS-- 197
Query: 77 GWGRVPACPLCRTRVFSTFVKQIIPTRVGVYGQDSETVGRHTSAVTSVRFNHKSSLLVSG 136
V P V ++ K + V G +T H V VR N +LL S
Sbjct: 198 ----VAIMPNGDHIVSASRDKTMKMWEVAT-GYCVKTFTGHREWVRMVRPNQDGTLLASC 252
Query: 137 SVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDS----LLASGSNDKTVTIWDMLAT 192
S D+TV++W V + C L H V C +++ + + A+GS +K
Sbjct: 253 SNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKS---GKPGP 309
Query: 193 LLASGSNDKTVTIWDM 208
L SGS DKT+ +WD+
Sbjct: 310 FLLSGSRDKTIKMWDI 325
Score = 121 (47.7 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIWD 188
L+SGS DKT+K+WD+ + C+ TL H +V F + S ++DKT+ IWD
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWD 366
Score = 44 (20.5 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 194 LASGSNDKTVTIWDMR 209
+ +GS D+TV +W+ R
Sbjct: 395 VVTGSVDQTVKVWECR 410
Score = 42 (19.8 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 194 LASGSNDKTVTIWDMR 209
+ S ++DKT+ IWD +
Sbjct: 353 VVSCADDKTLRIWDYK 368
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 139 (54.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 35/87 (40%), Positives = 46/87 (52%)
Query: 128 HKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+ S +L S S D TV+LWDV C+ TL H V FS D LASGS DK V IW
Sbjct: 424 NSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 483
Query: 188 DMLA-TLLAS--GSNDKTVTIWDMRGN 211
+ + +L+ S G+ W+ RG+
Sbjct: 484 NTQSGSLVHSYRGTGGIFEVCWNARGD 510
Score = 112 (44.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 27/87 (31%), Positives = 48/87 (55%)
Query: 112 ETVGRHTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTC------ 165
+T HT+ V +++++ LL S S D T+K+W + TC+ L++H++ +
Sbjct: 357 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPT 416
Query: 166 --CTFSCDDSL-LASGSNDKTVTIWDM 189
T + + S+ LAS S D TV +WD+
Sbjct: 417 GPATSNPNSSIMLASASFDSTVRLWDV 443
Score = 56 (24.8 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 2 HEFPMG-DGP-SLFNGTELILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDL 59
H PM DG + +LRG H C ++P + LLA+G D T +W ++
Sbjct: 159 HSKPMEIDGDVEIPPSKATVLRG--HESEVFICA-WNPVSDLLASGSGDSTARIWNLNEN 215
Query: 60 S 60
S
Sbjct: 216 S 216
>UNIPROTKB|E1BBZ9 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:DAAA02048546 IPI:IPI00718427 RefSeq:XP_002695684.2
RefSeq:XP_885171.4 UniGene:Bt.20080 ProteinModelPortal:E1BBZ9
Ensembl:ENSBTAT00000006593 GeneID:614851 KEGG:bta:614851
Uniprot:E1BBZ9
Length = 421
Score = 136 (52.9 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 31/72 (43%), Positives = 39/72 (54%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + V S F+ SS+L S K V LW++ T I+ LE H V C FS D +LLA
Sbjct: 213 HQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLA 272
Query: 177 SGSNDKTVTIWD 188
+ S D V IWD
Sbjct: 273 TASYDTRVYIWD 284
Score = 129 (50.5 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 30/75 (40%), Positives = 40/75 (53%)
Query: 117 HTSAVTSVRFNHKSSL-LVSGSVDKTVKLWDVPSL-TCIKTLESHTRYVTCCTFSCDDSL 174
HT V + F SL LVS S DKT+++WD+ +K L H +V C FS D S+
Sbjct: 169 HTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSM 228
Query: 175 LASGSNDKTVTIWDM 189
L S K V +W+M
Sbjct: 229 LCSVGASKAVFLWNM 243
Score = 117 (46.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 45/175 (25%), Positives = 74/175 (42%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW 78
+LRG H C FSPD+ +L + G + V +W D ++I + H +
Sbjct: 209 VLRG--HQNWVYSCA-FSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFS 265
Query: 79 --GRVPACPLCRTRVF--STFVKQIIPTRVGVYGQDSETV--GRHTSAVTSVRFNHKSSL 132
G + A TRV+ I+ ++ + G + V SV F+H
Sbjct: 266 PDGALLATASYDTRVYIWDPHTGAILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLH 325
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+ S + DK V+ W + ++ CC FS D S+LA+G++D +V W
Sbjct: 326 VASLADDKMVRFWRIDEDYPVQVAPLSNGL--CCAFSTDGSVLAAGTHDGSVYFW 378
Score = 115 (45.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 125 RFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSL-LASGSNDKT 183
RF LL +G + +K+WDV + + L HT V TF+ D SL L S S DKT
Sbjct: 135 RFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKT 194
Query: 184 VTIWDM 189
+ +WD+
Sbjct: 195 LRVWDL 200
Score = 49 (22.3 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 34 RFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ 72
RF D LLATG ++ + +W L++ D HT+
Sbjct: 135 RFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVD--HTE 171
Score = 42 (19.8 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 193 LLASGSNDKTVTIWD 207
LLA+ S D V IWD
Sbjct: 270 LLATASYDTRVYIWD 284
Score = 37 (18.1 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 192 TLLASGSNDKTVTIW 206
++LA+G++D +V W
Sbjct: 364 SVLAAGTHDGSVYFW 378
>UNIPROTKB|E2RFV0 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:AAEX03006660 RefSeq:XP_853945.1 ProteinModelPortal:E2RFV0
Ensembl:ENSCAFT00000029577 GeneID:480619 KEGG:cfa:480619
NextBio:20855611 Uniprot:E2RFV0
Length = 421
Score = 136 (52.9 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 31/72 (43%), Positives = 39/72 (54%)
Query: 117 HTSAVTSVRFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLA 176
H + V S F+ SS+L S K V LW++ T I+ LE H V C FS D +LLA
Sbjct: 213 HQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLA 272
Query: 177 SGSNDKTVTIWD 188
+ S D V IWD
Sbjct: 273 TASYDTRVYIWD 284
Score = 129 (50.5 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 30/75 (40%), Positives = 40/75 (53%)
Query: 117 HTSAVTSVRFNHKSSL-LVSGSVDKTVKLWDVPSL-TCIKTLESHTRYVTCCTFSCDDSL 174
HT V + F SL LVS S DKT+++WD+ +K L H +V C FS D S+
Sbjct: 169 HTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSM 228
Query: 175 LASGSNDKTVTIWDM 189
L S K V +W+M
Sbjct: 229 LCSVGASKAVFLWNM 243
Score = 115 (45.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 125 RFNHKSSLLVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSL-LASGSNDKT 183
RF LL +G + +K+WDV + + L HT V TF+ D SL L S S DKT
Sbjct: 135 RFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKT 194
Query: 184 VTIWDM 189
+ +WD+
Sbjct: 195 LRVWDL 200
Score = 115 (45.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 45/175 (25%), Positives = 74/175 (42%)
Query: 19 ILRGSVHIGSNMRCVRFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQGRIEGW 78
+LRG H C FSPD+ +L + G + V +W D ++I + H +
Sbjct: 209 VLRG--HQNWVYSCA-FSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFS 265
Query: 79 --GRVPACPLCRTRVF--STFVKQIIPTRVGVYGQDSETV--GRHTSAVTSVRFNHKSSL 132
G + A TRV+ I+ ++ + G + V SV F+H
Sbjct: 266 PDGALLATASYDTRVYIWDPHNGDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLH 325
Query: 133 LVSGSVDKTVKLWDVPSLTCIKTLESHTRYVTCCTFSCDDSLLASGSNDKTVTIW 187
+ S + DK V+ W + ++ CC FS D S+LA+G++D +V W
Sbjct: 326 VASLADDKMVRFWRIDEDYPVQVAPLSNGL--CCAFSTDGSVLAAGTHDGSVYFW 378
Score = 49 (22.3 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 34 RFSPDTRLLATGGDDETVTVWRSDDLSLIMETNDRGHTQ 72
RF D LLATG ++ + +W L++ D HT+
Sbjct: 135 RFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVD--HTE 171
Score = 42 (19.8 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 193 LLASGSNDKTVTIWD 207
LLA+ S D V IWD
Sbjct: 270 LLATASYDTRVYIWD 284
Score = 37 (18.1 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 192 TLLASGSNDKTVTIW 206
++LA+G++D +V W
Sbjct: 364 SVLAAGTHDGSVYFW 378
WARNING: HSPs involving 762 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 222 222 0.00096 112 3 11 22 0.37 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1012
No. of states in DFA: 602 (64 KB)
Total size of DFA: 192 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.09u 0.13s 20.22t Elapsed: 00:00:01
Total cpu time: 20.15u 0.13s 20.28t Elapsed: 00:00:01
Start: Thu Aug 15 16:00:56 2013 End: Thu Aug 15 16:00:57 2013
WARNINGS ISSUED: 2