Query psy16882
Match_columns 318
No_of_seqs 283 out of 1671
Neff 6.8
Searched_HMMs 46136
Date Sat Aug 17 00:31:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16882.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16882hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2462|consensus 99.8 2.2E-21 4.9E-26 177.4 5.8 107 1-117 146-256 (279)
2 KOG2462|consensus 99.8 3.1E-19 6.7E-24 163.4 2.9 89 1-94 177-265 (279)
3 KOG1074|consensus 99.4 5.5E-14 1.2E-18 144.0 1.8 69 43-115 608-679 (958)
4 KOG3576|consensus 99.4 1.2E-13 2.6E-18 121.7 0.4 100 9-112 114-220 (267)
5 KOG3623|consensus 99.3 2.1E-13 4.5E-18 137.9 0.6 81 9-93 891-971 (1007)
6 KOG3576|consensus 99.2 2.1E-12 4.5E-17 114.0 1.1 96 1-100 133-240 (267)
7 KOG3623|consensus 99.2 8E-12 1.7E-16 126.6 1.5 89 1-93 226-330 (1007)
8 KOG3608|consensus 99.1 6.6E-11 1.4E-15 111.8 4.8 109 1-115 253-363 (467)
9 KOG3608|consensus 99.1 3.9E-11 8.5E-16 113.4 1.9 97 1-103 195-295 (467)
10 KOG1074|consensus 98.8 1.2E-09 2.5E-14 112.7 -0.1 84 11-98 604-694 (958)
11 PHA00733 hypothetical protein 98.7 1.5E-08 3.2E-13 84.9 3.8 83 9-97 37-124 (128)
12 PLN03086 PRLI-interacting fact 98.5 1.4E-07 2.9E-12 96.0 5.2 97 10-120 451-559 (567)
13 PHA00733 hypothetical protein 98.4 1.4E-07 3E-12 79.0 3.5 63 1-67 62-124 (128)
14 PHA02768 hypothetical protein; 98.4 1E-07 2.2E-12 67.8 1.7 42 13-58 6-47 (55)
15 KOG3993|consensus 98.2 1.9E-07 4.2E-12 90.4 -0.2 83 12-98 267-382 (500)
16 PHA02768 hypothetical protein; 98.2 6E-07 1.3E-11 63.9 1.3 43 40-88 5-47 (55)
17 PLN03086 PRLI-interacting fact 98.2 1.8E-06 3.9E-11 87.9 5.3 85 1-94 468-562 (567)
18 PF13465 zf-H2C2_2: Zinc-finge 98.1 2E-06 4.4E-11 52.0 1.6 24 58-83 2-25 (26)
19 PF13465 zf-H2C2_2: Zinc-finge 97.8 8.2E-06 1.8E-10 49.3 1.7 25 27-53 1-25 (26)
20 PHA00616 hypothetical protein 97.7 1.1E-05 2.4E-10 54.8 0.7 33 12-44 1-33 (44)
21 PHA00732 hypothetical protein 97.6 5.1E-05 1.1E-09 58.3 2.6 47 12-66 1-48 (79)
22 PHA00616 hypothetical protein 97.4 6.3E-05 1.4E-09 51.1 1.4 32 70-103 1-32 (44)
23 KOG3993|consensus 97.3 9.5E-05 2.1E-09 72.1 2.0 53 12-66 295-380 (500)
24 COG5189 SFP1 Putative transcri 97.2 0.00011 2.4E-09 69.3 1.1 54 38-93 347-419 (423)
25 PF00096 zf-C2H2: Zinc finger, 97.1 0.00016 3.4E-09 42.0 0.8 23 13-35 1-23 (23)
26 PHA00732 hypothetical protein 97.1 0.00031 6.7E-09 54.0 2.4 47 40-96 1-48 (79)
27 PF12756 zf-C2H2_2: C2H2 type 96.9 0.00076 1.6E-08 52.5 2.7 74 14-96 1-74 (100)
28 PF05605 zf-Di19: Drought indu 96.8 0.0013 2.9E-08 46.5 3.6 49 41-96 3-53 (54)
29 PF00096 zf-C2H2: Zinc finger, 96.8 0.001 2.2E-08 38.5 2.2 23 71-95 1-23 (23)
30 PF05605 zf-Di19: Drought indu 96.7 0.0013 2.8E-08 46.6 2.7 50 12-66 2-53 (54)
31 PF13894 zf-C2H2_4: C2H2-type 96.5 0.0012 2.6E-08 37.9 1.2 23 13-35 1-23 (24)
32 PF13894 zf-C2H2_4: C2H2-type 96.5 0.0023 5E-08 36.7 2.4 24 71-96 1-24 (24)
33 PF13912 zf-C2H2_6: C2H2-type 96.4 0.0013 2.9E-08 39.5 0.8 25 12-36 1-25 (27)
34 COG5189 SFP1 Putative transcri 96.2 0.0021 4.5E-08 60.9 1.7 53 9-63 346-419 (423)
35 PF09237 GAGA: GAGA factor; I 95.8 0.0053 1.1E-07 43.0 1.5 29 39-69 23-51 (54)
36 PF13912 zf-C2H2_6: C2H2-type 95.7 0.0057 1.2E-07 36.7 1.4 25 70-96 1-25 (27)
37 smart00355 ZnF_C2H2 zinc finge 95.5 0.0091 2E-07 34.5 1.7 24 13-36 1-24 (26)
38 PF09237 GAGA: GAGA factor; I 94.8 0.027 5.9E-07 39.5 2.7 33 66-100 20-52 (54)
39 smart00355 ZnF_C2H2 zinc finge 94.1 0.043 9.2E-07 31.5 2.2 24 71-96 1-24 (26)
40 COG5048 FOG: Zn-finger [Genera 93.8 0.047 1E-06 52.2 3.0 70 12-81 289-362 (467)
41 PF12874 zf-met: Zinc-finger o 93.7 0.027 5.8E-07 33.0 0.7 22 13-34 1-22 (25)
42 PF12874 zf-met: Zinc-finger o 92.9 0.063 1.4E-06 31.4 1.5 23 71-95 1-23 (25)
43 PF12171 zf-C2H2_jaz: Zinc-fin 92.5 0.057 1.2E-06 32.5 0.9 22 13-34 2-23 (27)
44 PF13909 zf-H2C2_5: C2H2-type 92.3 0.13 2.7E-06 29.9 2.2 23 71-96 1-23 (24)
45 PF13909 zf-H2C2_5: C2H2-type 92.2 0.067 1.5E-06 31.1 0.9 22 13-35 1-22 (24)
46 COG5048 FOG: Zn-finger [Genera 92.0 0.082 1.8E-06 50.6 1.8 100 1-100 305-416 (467)
47 KOG4173|consensus 89.7 0.085 1.8E-06 47.4 -0.4 81 11-96 78-171 (253)
48 PRK04860 hypothetical protein; 89.3 0.27 5.8E-06 42.8 2.4 36 40-83 119-154 (160)
49 PF12171 zf-C2H2_jaz: Zinc-fin 86.4 0.36 7.9E-06 28.9 1.1 21 41-63 2-22 (27)
50 PF13913 zf-C2HC_2: zinc-finge 85.3 0.51 1.1E-05 28.1 1.3 20 13-33 3-22 (25)
51 PF13913 zf-C2HC_2: zinc-finge 82.7 1.1 2.4E-05 26.6 2.0 21 71-94 3-23 (25)
52 smart00451 ZnF_U1 U1-like zinc 82.3 0.68 1.5E-05 29.0 1.0 22 12-33 3-24 (35)
53 KOG2231|consensus 78.5 1.5 3.2E-05 46.1 2.6 76 15-96 118-206 (669)
54 smart00451 ZnF_U1 U1-like zinc 77.9 1.8 3.9E-05 27.0 1.9 23 70-94 3-25 (35)
55 KOG1146|consensus 77.8 1.3 2.8E-05 49.5 2.0 76 15-94 439-540 (1406)
56 PF12756 zf-C2H2_2: C2H2 type 77.0 1.3 2.8E-05 34.0 1.2 22 41-64 51-72 (100)
57 PRK04860 hypothetical protein; 70.9 2.8 6E-05 36.5 1.9 31 24-56 127-157 (160)
58 KOG4173|consensus 69.9 0.99 2.1E-05 40.7 -1.1 55 12-66 106-171 (253)
59 KOG2893|consensus 64.1 2.3 4.9E-05 39.3 0.0 49 39-96 10-59 (341)
60 PF09986 DUF2225: Uncharacteri 61.1 4.6 0.0001 36.6 1.5 24 10-33 3-26 (214)
61 cd00350 rubredoxin_like Rubred 57.2 6.9 0.00015 24.6 1.4 10 13-22 2-11 (33)
62 KOG2231|consensus 56.1 9.4 0.0002 40.3 2.9 73 17-96 155-236 (669)
63 KOG2893|consensus 56.0 4.3 9.2E-05 37.6 0.4 45 15-65 13-58 (341)
64 PF06286 Coleoptericin: Coleop 53.8 18 0.00038 30.2 3.6 88 216-312 24-114 (143)
65 KOG2186|consensus 50.5 7.5 0.00016 36.2 1.0 51 12-67 3-53 (276)
66 COG5236 Uncharacterized conser 49.7 12 0.00025 36.6 2.2 16 48-63 226-241 (493)
67 KOG1146|consensus 49.1 4.9 0.00011 45.2 -0.5 78 12-98 1260-1355(1406)
68 PRK09678 DNA-binding transcrip 49.1 9.6 0.00021 28.7 1.2 45 13-59 2-46 (72)
69 PF09538 FYDLN_acid: Protein o 49.0 11 0.00025 30.5 1.8 30 41-85 10-39 (108)
70 PF11789 zf-Nse: Zinc-finger o 46.6 22 0.00047 25.4 2.7 35 39-79 23-57 (57)
71 PF07800 DUF1644: Protein of u 46.4 46 0.001 29.0 5.1 39 61-100 98-137 (162)
72 PRK00464 nrdR transcriptional 45.6 9.6 0.00021 32.9 0.9 14 41-56 29-42 (154)
73 COG4049 Uncharacterized protei 45.2 8.3 0.00018 27.7 0.4 25 9-33 14-38 (65)
74 smart00614 ZnF_BED BED zinc fi 42.7 15 0.00033 25.1 1.4 24 12-35 18-47 (50)
75 COG4049 Uncharacterized protei 41.9 13 0.00028 26.7 0.9 29 64-94 11-39 (65)
76 TIGR00622 ssl1 transcription f 39.7 49 0.0011 27.1 4.1 80 11-96 14-105 (112)
77 COG5236 Uncharacterized conser 38.5 49 0.0011 32.4 4.5 21 72-94 222-242 (493)
78 KOG2785|consensus 37.9 21 0.00046 35.1 2.0 75 11-94 165-242 (390)
79 KOG4124|consensus 36.6 8.4 0.00018 37.5 -0.9 25 39-63 348-372 (442)
80 smart00734 ZnF_Rad18 Rad18-lik 35.5 31 0.00067 20.6 1.7 21 71-94 2-22 (26)
81 PF02892 zf-BED: BED zinc fing 35.2 34 0.00074 22.4 2.2 25 67-93 13-41 (45)
82 PHA00649 hypothetical protein 35.0 21 0.00045 26.8 1.1 16 241-256 25-40 (83)
83 cd00729 rubredoxin_SM Rubredox 34.7 26 0.00056 22.3 1.4 11 12-22 2-12 (34)
84 PF05290 Baculo_IE-1: Baculovi 34.3 21 0.00045 30.2 1.1 57 9-86 77-135 (140)
85 TIGR02098 MJ0042_CXXC MJ0042 f 33.7 34 0.00073 21.8 1.9 10 14-23 4-13 (38)
86 PF12013 DUF3505: Protein of u 33.6 33 0.00072 27.3 2.3 26 70-97 80-109 (109)
87 KOG3002|consensus 31.4 70 0.0015 30.7 4.3 61 39-105 79-141 (299)
88 TIGR02605 CxxC_CxxC_SSSS putat 30.9 23 0.0005 24.2 0.7 11 13-23 6-16 (52)
89 PF13719 zinc_ribbon_5: zinc-r 30.6 43 0.00094 21.5 2.0 10 14-23 4-13 (37)
90 PF09986 DUF2225: Uncharacteri 29.8 30 0.00064 31.4 1.5 44 38-85 3-61 (214)
91 KOG4167|consensus 29.7 12 0.00025 39.9 -1.3 25 12-36 792-816 (907)
92 TIGR02300 FYDLN_acid conserved 29.2 39 0.00085 28.3 1.9 30 41-85 10-39 (129)
93 KOG2785|consensus 29.1 51 0.0011 32.6 3.0 25 9-33 65-89 (390)
94 PRK00398 rpoP DNA-directed RNA 28.8 35 0.00076 22.9 1.4 12 12-23 3-14 (46)
95 PF14353 CpXC: CpXC protein 27.9 12 0.00025 30.8 -1.4 49 13-63 2-59 (128)
96 smart00834 CxxC_CXXC_SSSS Puta 27.6 30 0.00064 22.2 0.8 11 13-23 6-16 (41)
97 smart00531 TFIIE Transcription 27.2 36 0.00078 28.8 1.5 31 13-50 100-131 (147)
98 PF12013 DUF3505: Protein of u 26.8 35 0.00077 27.1 1.3 20 16-35 88-107 (109)
99 PF04606 Ogr_Delta: Ogr/Delta- 26.3 28 0.00061 23.6 0.5 41 14-56 1-41 (47)
100 COG1592 Rubrerythrin [Energy p 26.2 46 0.001 29.1 2.0 24 40-80 134-157 (166)
101 TIGR00373 conserved hypothetic 25.0 34 0.00075 29.4 1.0 26 13-49 110-135 (158)
102 PF05443 ROS_MUCR: ROS/MUCR tr 24.6 33 0.00071 28.9 0.7 26 12-40 72-97 (132)
103 PF13717 zinc_ribbon_4: zinc-r 24.5 68 0.0015 20.6 2.1 10 14-23 4-13 (36)
104 KOG4377|consensus 24.5 54 0.0012 32.8 2.3 25 72-96 403-427 (480)
105 smart00659 RPOLCX RNA polymera 24.2 61 0.0013 21.9 1.8 12 12-23 2-13 (44)
106 PRK06266 transcription initiat 23.6 37 0.00079 29.9 0.9 26 13-49 118-143 (178)
107 PF07759 DUF1615: Protein of u 23.0 37 0.0008 32.6 0.8 32 219-250 259-295 (319)
108 KOG2186|consensus 22.1 54 0.0012 30.7 1.7 51 41-98 4-54 (276)
109 COG0238 RpsR Ribosomal protein 21.9 67 0.0015 24.4 1.9 38 236-279 20-57 (75)
No 1
>KOG2462|consensus
Probab=99.83 E-value=2.2e-21 Score=177.35 Aligned_cols=107 Identities=37% Similarity=0.761 Sum_probs=97.9
Q ss_pred Chhchhhh----CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCC
Q psy16882 1 MRKHLHTH----GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFD 76 (318)
Q Consensus 1 Lr~HlrtH----g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~ 76 (318)
|.+|..+| ..+.+.|++|++.|.+...|+.|+++|+ .+++|.+ |||.|.+.+.|+.|+|+|+|||||.|++
T Consensus 146 LsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~i--CGKaFSRPWLLQGHiRTHTGEKPF~C~h- 220 (279)
T KOG2462|consen 146 LSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGI--CGKAFSRPWLLQGHIRTHTGEKPFSCPH- 220 (279)
T ss_pred cchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCccccc--ccccccchHHhhcccccccCCCCccCCc-
Confidence 67899999 5688999999999999999999999997 6789988 9999999999999999999999999987
Q ss_pred CCCcccCChhHHHHHHHHhcccccccccccCCCchhHHHhh
Q psy16882 77 GCNKKFAQSTNLKSHILTHAKAKLLKGLFSLKMCPHILDEM 117 (318)
Q Consensus 77 ~C~k~F~~~~~L~~H~r~H~~~k~~~c~~~C~~C~~~~~~~ 117 (318)
|+|.|..+++|+.|++||.+.|.| .|..|++.|.-|
T Consensus 221 -C~kAFADRSNLRAHmQTHS~~K~~----qC~~C~KsFsl~ 256 (279)
T KOG2462|consen 221 -CGKAFADRSNLRAHMQTHSDVKKH----QCPRCGKSFALK 256 (279)
T ss_pred -ccchhcchHHHHHHHHhhcCCccc----cCcchhhHHHHH
Confidence 999999999999999999999864 577888877643
No 2
>KOG2462|consensus
Probab=99.75 E-value=3.1e-19 Score=163.38 Aligned_cols=89 Identities=40% Similarity=0.739 Sum_probs=84.4
Q ss_pred ChhchhhhCCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCc
Q psy16882 1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK 80 (318)
Q Consensus 1 Lr~HlrtHg~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k 80 (318)
|++|+||| .-+++|.+|||.|.+..-|+-|+++|+||+||.|+. |+++|.++++|+.||++|.+.|+|+|.. |+|
T Consensus 177 LkMHirTH-~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~h--C~kAFADRSNLRAHmQTHS~~K~~qC~~--C~K 251 (279)
T KOG2462|consen 177 LKMHIRTH-TLPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPH--CGKAFADRSNLRAHMQTHSDVKKHQCPR--CGK 251 (279)
T ss_pred HhhHhhcc-CCCcccccccccccchHHhhcccccccCCCCccCCc--ccchhcchHHHHHHHHhhcCCccccCcc--hhh
Confidence 68999999 478999999999999999999999999999999998 9999999999999999999999999965 999
Q ss_pred ccCChhHHHHHHHH
Q psy16882 81 KFAQSTNLKSHILT 94 (318)
Q Consensus 81 ~F~~~~~L~~H~r~ 94 (318)
+|+..+.|.+|...
T Consensus 252 sFsl~SyLnKH~ES 265 (279)
T KOG2462|consen 252 SFALKSYLNKHSES 265 (279)
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999999754
No 3
>KOG1074|consensus
Probab=99.41 E-value=5.5e-14 Score=144.04 Aligned_cols=69 Identities=32% Similarity=0.662 Sum_probs=63.1
Q ss_pred cccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhcccccccccccCC---CchhHHH
Q psy16882 43 CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKGLFSLK---MCPHILD 115 (318)
Q Consensus 43 C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c~~~C~---~C~~~~~ 115 (318)
|.+ |.++....+.|+.|.|+|+||+||+|.| |++.|.++.+|+.|+.+|...-+++-.+.|+ +|-+-|.
T Consensus 608 Cii--C~rVlSC~saLqmHyrtHtGERPFkCKi--CgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kft 679 (958)
T KOG1074|consen 608 CII--CLRVLSCPSALQMHYRTHTGERPFKCKI--CGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFT 679 (958)
T ss_pred eee--eeecccchhhhhhhhhcccCcCcccccc--ccchhccccchhhcccccccCccccccccCCchhhhccccc
Confidence 777 9999999999999999999999999988 9999999999999999999888888888888 8876554
No 4
>KOG3576|consensus
Probab=99.35 E-value=1.2e-13 Score=121.69 Aligned_cols=100 Identities=38% Similarity=0.720 Sum_probs=86.3
Q ss_pred CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHH
Q psy16882 9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL 88 (318)
Q Consensus 9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L 88 (318)
+...|.|.+|++.|.-..-|.+|++.|...+.|-|.. ||+.|...-.|++|+|+|+|-+||+|.+ |++.|..+-.|
T Consensus 114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~~--c~kaftqrcsl 189 (267)
T KOG3576|consen 114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCSL--CEKAFTQRCSL 189 (267)
T ss_pred CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccchhh--hhHHHHhhccH
Confidence 3456999999999999999999999999999999998 9999999999999999999999999977 99999999999
Q ss_pred HHHHH-Hhccccccc------ccccCCCchh
Q psy16882 89 KSHIL-THAKAKLLK------GLFSLKMCPH 112 (318)
Q Consensus 89 ~~H~r-~H~~~k~~~------c~~~C~~C~~ 112 (318)
..|++ +|.....|. -.|.|+.|+.
T Consensus 190 eshl~kvhgv~~~yaykerr~kl~vcedcg~ 220 (267)
T KOG3576|consen 190 ESHLKKVHGVQHQYAYKERRAKLYVCEDCGY 220 (267)
T ss_pred HHHHHHHcCchHHHHHHHhhhheeeecccCC
Confidence 99985 454322221 2467777764
No 5
>KOG3623|consensus
Probab=99.33 E-value=2.1e-13 Score=137.92 Aligned_cols=81 Identities=37% Similarity=0.858 Sum_probs=77.5
Q ss_pred CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHH
Q psy16882 9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL 88 (318)
Q Consensus 9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L 88 (318)
.+..|.|+.|.|.|...++|.+|.-.|+|.+||+|.+ |.|+|..+.+|..|+|.|.|+|||.| ++|+|+|+....+
T Consensus 891 e~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~i--CkKAFKHKHHLtEHkRLHSGEKPfQC--dKClKRFSHSGSY 966 (1007)
T KOG3623|consen 891 EDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCII--CKKAFKHKHHLTEHKRLHSGEKPFQC--DKCLKRFSHSGSY 966 (1007)
T ss_pred ccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccch--hhHhhhhhhhhhhhhhhccCCCcchh--hhhhhhcccccch
Confidence 4578999999999999999999999999999999999 99999999999999999999999999 7799999999999
Q ss_pred HHHHH
Q psy16882 89 KSHIL 93 (318)
Q Consensus 89 ~~H~r 93 (318)
.+||-
T Consensus 967 SQHMN 971 (1007)
T KOG3623|consen 967 SQHMN 971 (1007)
T ss_pred Hhhhc
Confidence 99973
No 6
>KOG3576|consensus
Probab=99.23 E-value=2.1e-12 Score=113.95 Aligned_cols=96 Identities=31% Similarity=0.689 Sum_probs=86.1
Q ss_pred Chhchhhh-CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCC-----------C
Q psy16882 1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG-----------D 68 (318)
Q Consensus 1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g-----------e 68 (318)
|++||+.| ..+.|-|..||+.|..-..|++|+++|+|.+||+|.. |+++|...-.|..|.+.-+| +
T Consensus 133 lnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~--c~kaftqrcsleshl~kvhgv~~~yaykerr~ 210 (267)
T KOG3576|consen 133 LNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSL--CEKAFTQRCSLESHLKKVHGVQHQYAYKERRA 210 (267)
T ss_pred HHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhh--hhHHHHhhccHHHHHHHHcCchHHHHHHHhhh
Confidence 67899999 8899999999999999999999999999999999998 99999999999999864333 4
Q ss_pred CceeccCCCCCcccCChhHHHHHHHHhccccc
Q psy16882 69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKL 100 (318)
Q Consensus 69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~ 100 (318)
+.|.| ++||.+-.+...+..|++.|+...+
T Consensus 211 kl~vc--edcg~t~~~~e~~~~h~~~~hp~Sp 240 (267)
T KOG3576|consen 211 KLYVC--EDCGYTSERPEVYYLHLKLHHPFSP 240 (267)
T ss_pred heeee--cccCCCCCChhHHHHHHHhcCCCCH
Confidence 67999 5699999999999999999886544
No 7
>KOG3623|consensus
Probab=99.16 E-value=8e-12 Score=126.61 Aligned_cols=89 Identities=35% Similarity=0.836 Sum_probs=72.0
Q ss_pred Chhchh-hh--CCCcccCCccCcccccchhhhhhhhhhcC-------------CCceecccCCCCCcccchhhhhhhhhh
Q psy16882 1 MRKHLH-TH--GPRVHVCAECGKAFVESSKLKRHQLVHTG-------------EKPFQCTFEGCGKRFSLDFNLRTHVRI 64 (318)
Q Consensus 1 Lr~Hlr-tH--g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~-------------~kpy~C~~~~Cgk~F~~~~~L~~H~r~ 64 (318)
|+.|++ .| -+..|.|..|..+|..+..|.+||.+|.. .+.|+|.. |+|+|..+.+|+.|+|+
T Consensus 226 lkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtE--CgKAFKfKHHLKEHlRI 303 (1007)
T KOG3623|consen 226 LKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTE--CGKAFKFKHHLKEHLRI 303 (1007)
T ss_pred HHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccc--cchhhhhHHHHHhhhee
Confidence 345654 34 45668899999999999999999988853 25588976 99999999999999999
Q ss_pred cCCCCceeccCCCCCcccCChhHHHHHHH
Q psy16882 65 HTGDRPYVCPFDGCNKKFAQSTNLKSHIL 93 (318)
Q Consensus 65 H~gekpf~C~~~~C~k~F~~~~~L~~H~r 93 (318)
|.|+|||.|+ .|+|+|+....+..|+.
T Consensus 304 HSGEKPfeCp--nCkKRFSHSGSySSHmS 330 (1007)
T KOG3623|consen 304 HSGEKPFECP--NCKKRFSHSGSYSSHMS 330 (1007)
T ss_pred ecCCCCcCCc--ccccccccCCccccccc
Confidence 9999999994 59999999888888874
No 8
>KOG3608|consensus
Probab=99.10 E-value=6.6e-11 Score=111.85 Aligned_cols=109 Identities=24% Similarity=0.515 Sum_probs=75.7
Q ss_pred ChhchhhhCCCcccCCccCcccccchhhhhhhh-hhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCC
Q psy16882 1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCN 79 (318)
Q Consensus 1 Lr~HlrtHg~k~f~C~~Cgk~F~~~~~L~~H~~-~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~ 79 (318)
|+.|++.| ..-|+|+.|..+....++|.+||+ .|...+||+|.. |.+.|.+.+.|++|..+|. +..|.|.+++|.
T Consensus 253 L~~Hv~rH-vn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~--Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~ 328 (467)
T KOG3608|consen 253 LKSHVVRH-VNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDE--CDTRCVRESDLAKHVQVHS-KTVYQCEHPDCH 328 (467)
T ss_pred HHHHHHHh-hhcccccccccCCCChHHHHHHHHhhhccCCCccccc--hhhhhccHHHHHHHHHhcc-ccceecCCCCCc
Confidence 45566555 556777777777777777777776 577777788876 7788888888888877776 566777777777
Q ss_pred cccCChhHHHHHHHHhc-ccccccccccCCCchhHHH
Q psy16882 80 KKFAQSTNLKSHILTHA-KAKLLKGLFSLKMCPHILD 115 (318)
Q Consensus 80 k~F~~~~~L~~H~r~H~-~~k~~~c~~~C~~C~~~~~ 115 (318)
..|.+..+|.+|++.++ +..+ ..|.|..|.+.|.
T Consensus 329 ~s~r~~~q~~~H~~evhEg~np--~~Y~CH~Cdr~ft 363 (467)
T KOG3608|consen 329 YSVRTYTQMRRHFLEVHEGNNP--ILYACHCCDRFFT 363 (467)
T ss_pred HHHHHHHHHHHHHHHhccCCCC--Cceeeecchhhhc
Confidence 77777777878875433 4443 2455666665543
No 9
>KOG3608|consensus
Probab=99.07 E-value=3.9e-11 Score=113.36 Aligned_cols=97 Identities=36% Similarity=0.683 Sum_probs=72.8
Q ss_pred Chhchhhh-CCCcccCCccCcccccchhhhhhhhhhc--CCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCC
Q psy16882 1 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHT--GEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG 77 (318)
Q Consensus 1 Lr~HlrtH-g~k~f~C~~Cgk~F~~~~~L~~H~~~H~--~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~ 77 (318)
|+.|+++| +++...|+.||.-|+++..|-.|.+..+ ...+|.|.. |.|.|.+...|..|++.|.. -|+|++
T Consensus 195 LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~--C~KrFaTeklL~~Hv~rHvn--~ykCpl-- 268 (467)
T KOG3608|consen 195 LREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQ--CFKRFATEKLLKSHVVRHVN--CYKCPL-- 268 (467)
T ss_pred HHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHH--HHHHHhHHHHHHHHHHHhhh--cccccc--
Confidence 68899999 8998899999999999999988887543 445788876 88888888888888777743 467766
Q ss_pred CCcccCChhHHHHHHHH-hcccccccc
Q psy16882 78 CNKKFAQSTNLKSHILT-HAKAKLLKG 103 (318)
Q Consensus 78 C~k~F~~~~~L~~H~r~-H~~~k~~~c 103 (318)
|+.+...++.|..|++. |...++|+|
T Consensus 269 Cdmtc~~~ssL~~H~r~rHs~dkpfKC 295 (467)
T KOG3608|consen 269 CDMTCSSASSLTTHIRYRHSKDKPFKC 295 (467)
T ss_pred cccCCCChHHHHHHHHhhhccCCCccc
Confidence 77777777777777654 555665554
No 10
>KOG1074|consensus
Probab=98.77 E-value=1.2e-09 Score=112.73 Aligned_cols=84 Identities=35% Similarity=0.748 Sum_probs=77.4
Q ss_pred CcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCC----Cceecc---CCCCCcccC
Q psy16882 11 RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD----RPYVCP---FDGCNKKFA 83 (318)
Q Consensus 11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ge----kpf~C~---~~~C~k~F~ 83 (318)
-+..|-+|-+...-++.|+.|.++|+|++||+|.+ ||+.|.++.+|+.||-+|... -+|.|+ + |-+.|.
T Consensus 604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKi--CgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~i--c~~kft 679 (958)
T KOG1074|consen 604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKI--CGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFI--CQKKFT 679 (958)
T ss_pred CccceeeeeecccchhhhhhhhhcccCcCcccccc--ccchhccccchhhcccccccCccccccccCCchhh--hccccc
Confidence 36789999999999999999999999999999999 999999999999999999654 458998 8 999999
Q ss_pred ChhHHHHHHHHhccc
Q psy16882 84 QSTNLKSHILTHAKA 98 (318)
Q Consensus 84 ~~~~L~~H~r~H~~~ 98 (318)
..-.|..|+++|.+.
T Consensus 680 n~V~lpQhIriH~~~ 694 (958)
T KOG1074|consen 680 NAVTLPQHIRIHLGG 694 (958)
T ss_pred ccccccceEEeecCC
Confidence 999999999999843
No 11
>PHA00733 hypothetical protein
Probab=98.68 E-value=1.5e-08 Score=84.87 Aligned_cols=83 Identities=20% Similarity=0.447 Sum_probs=69.6
Q ss_pred CCCcccCCccCcccccchhhhhh--hh---hhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccC
Q psy16882 9 GPRVHVCAECGKAFVESSKLKRH--QL---VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFA 83 (318)
Q Consensus 9 g~k~f~C~~Cgk~F~~~~~L~~H--~~---~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~ 83 (318)
..+++.|.+|.+.|.....|..| +. .+.+.+||.|.. |++.|.+...|..|++.| +.+|.|.+ |++.|.
T Consensus 37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~--Cgk~Fss~s~L~~H~r~h--~~~~~C~~--CgK~F~ 110 (128)
T PHA00733 37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPL--CLMPFSSSVSLKQHIRYT--EHSKVCPV--CGKEFR 110 (128)
T ss_pred hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCC--CCCcCCCHHHHHHHHhcC--CcCccCCC--CCCccC
Confidence 35789999999999888777776 22 234578999987 999999999999999987 45799976 999999
Q ss_pred ChhHHHHHHHHhcc
Q psy16882 84 QSTNLKSHILTHAK 97 (318)
Q Consensus 84 ~~~~L~~H~r~H~~ 97 (318)
....|..|+...++
T Consensus 111 ~~~sL~~H~~~~h~ 124 (128)
T PHA00733 111 NTDSTLDHVCKKHN 124 (128)
T ss_pred CHHHHHHHHHHhcC
Confidence 99999999987664
No 12
>PLN03086 PRLI-interacting factor K; Provisional
Probab=98.48 E-value=1.4e-07 Score=96.05 Aligned_cols=97 Identities=23% Similarity=0.441 Sum_probs=74.5
Q ss_pred CCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCC-----
Q psy16882 10 PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQ----- 84 (318)
Q Consensus 10 ~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~----- 84 (318)
++.+.|+.|++.|. ...|..|+.+|+ .++.|+ |++.+ .+..|..|+++|.+.+++.|++ |++.|..
T Consensus 451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp---Cg~~~-~R~~L~~H~~thCp~Kpi~C~f--C~~~v~~g~~~~ 521 (567)
T PLN03086 451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP---CGVVL-EKEQMVQHQASTCPLRLITCRF--CGDMVQAGGSAM 521 (567)
T ss_pred ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC---CCCCc-chhHHHhhhhccCCCCceeCCC--CCCccccCcccc
Confidence 45678999999996 678999999875 789996 99755 6689999999999999999988 9999852
Q ss_pred -----hhHHHHHHHHhcccccccccccCCCchhHHH--hhhhc
Q psy16882 85 -----STNLKSHILTHAKAKLLKGLFSLKMCPHILD--EMKRH 120 (318)
Q Consensus 85 -----~~~L~~H~r~H~~~k~~~c~~~C~~C~~~~~--~~~~h 120 (318)
...|..|..++ +.++ +.|..|++.+. .|..|
T Consensus 522 d~~d~~s~Lt~HE~~C-G~rt----~~C~~Cgk~Vrlrdm~~H 559 (567)
T PLN03086 522 DVRDRLRGMSEHESIC-GSRT----APCDSCGRSVMLKEMDIH 559 (567)
T ss_pred chhhhhhhHHHHHHhc-CCcc----eEccccCCeeeehhHHHH
Confidence 35788998886 5554 45667765432 34444
No 13
>PHA00733 hypothetical protein
Probab=98.44 E-value=1.4e-07 Score=79.01 Aligned_cols=63 Identities=29% Similarity=0.389 Sum_probs=54.3
Q ss_pred ChhchhhhCCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882 1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 67 (318)
Q Consensus 1 Lr~HlrtHg~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g 67 (318)
|++|+.+|+.++|.|+.|++.|.+...|..|++.| ..+|.|.. |++.|.....|..|+...++
T Consensus 62 l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~--CgK~F~~~~sL~~H~~~~h~ 124 (128)
T PHA00733 62 LYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPV--CGKEFRNTDSTLDHVCKKHN 124 (128)
T ss_pred HHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCC--CCCccCCHHHHHHHHHHhcC
Confidence 34566666889999999999999999999999987 35799987 99999999999999876543
No 14
>PHA02768 hypothetical protein; Provisional
Probab=98.41 E-value=1e-07 Score=67.82 Aligned_cols=42 Identities=14% Similarity=0.313 Sum_probs=24.8
Q ss_pred ccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhh
Q psy16882 13 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL 58 (318)
Q Consensus 13 f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L 58 (318)
|.|+.||+.|.+.++|..||++|+ ++|+|.. |++.|...+.|
T Consensus 6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~--C~k~f~~~s~l 47 (55)
T PHA02768 6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSN--CKRISLRTGEY 47 (55)
T ss_pred cCcchhCCeeccHHHHHHHHHhcC--CcccCCc--ccceeccccee
Confidence 556666666666666666666665 4556654 66666555544
No 15
>KOG3993|consensus
Probab=98.24 E-value=1.9e-07 Score=90.42 Aligned_cols=83 Identities=30% Similarity=0.566 Sum_probs=70.5
Q ss_pred cccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCC------------------------
Q psy16882 12 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG------------------------ 67 (318)
Q Consensus 12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g------------------------ 67 (318)
-|.|.+|...|.....|.+|...-.-..-|+|+. |+|.|....+|..|.|||.-
T Consensus 267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPE--C~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~e 344 (500)
T KOG3993|consen 267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPE--CDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQE 344 (500)
T ss_pred HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCc--ccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhh
Confidence 4899999999999999999986443334699986 99999999999999999931
Q ss_pred ---------CCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882 68 ---------DRPYVCPFDGCNKKFAQSTNLKSHILTHAKA 98 (318)
Q Consensus 68 ---------ekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~ 98 (318)
+..|.|.+ |++.|.+..+|+.|+.+|+..
T Consensus 345 a~rsg~dss~gi~~C~~--C~KkFrRqAYLrKHqlthq~~ 382 (500)
T KOG3993|consen 345 AERSGDDSSSGIFSCHT--CGKKFRRQAYLRKHQLTHQRA 382 (500)
T ss_pred ccccCCcccCceeecHH--hhhhhHHHHHHHHhHHhhhcc
Confidence 12399977 999999999999999888753
No 16
>PHA02768 hypothetical protein; Provisional
Probab=98.18 E-value=6e-07 Score=63.86 Aligned_cols=43 Identities=19% Similarity=0.475 Sum_probs=36.3
Q ss_pred ceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHH
Q psy16882 40 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL 88 (318)
Q Consensus 40 py~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L 88 (318)
.|.|+. ||+.|...++|..|+++|+ ++|+|. +|++.|.+.+.|
T Consensus 5 ~y~C~~--CGK~Fs~~~~L~~H~r~H~--k~~kc~--~C~k~f~~~s~l 47 (55)
T PHA02768 5 GYECPI--CGEIYIKRKSMITHLRKHN--TNLKLS--NCKRISLRTGEY 47 (55)
T ss_pred ccCcch--hCCeeccHHHHHHHHHhcC--CcccCC--cccceeccccee
Confidence 478987 9999999999999999997 688995 499999877665
No 17
>PLN03086 PRLI-interacting factor K; Provisional
Probab=98.18 E-value=1.8e-06 Score=87.95 Aligned_cols=85 Identities=24% Similarity=0.496 Sum_probs=70.4
Q ss_pred ChhchhhhCCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCccc----------chhhhhhhhhhcCCCCc
Q psy16882 1 MRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFS----------LDFNLRTHVRIHTGDRP 70 (318)
Q Consensus 1 Lr~HlrtHg~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~----------~~~~L~~H~r~H~gekp 70 (318)
|..|+++| ..++.|+ |++.| .+..|..|+.+|.+.+++.|.. |++.|. ....|..|+..+ |.++
T Consensus 468 LekH~~~~-Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~f--C~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt 541 (567)
T PLN03086 468 MEKHMKVF-HEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRF--CGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRT 541 (567)
T ss_pred HHHHHHhc-CCCccCC-CCCCc-chhHHHhhhhccCCCCceeCCC--CCCccccCccccchhhhhhhHHHHHHhc-CCcc
Confidence 45677776 4889999 99765 6689999999999999999998 999984 245899999886 9999
Q ss_pred eeccCCCCCcccCChhHHHHHHHH
Q psy16882 71 YVCPFDGCNKKFAQSTNLKSHILT 94 (318)
Q Consensus 71 f~C~~~~C~k~F~~~~~L~~H~r~ 94 (318)
+.|.. |++.|..+ .|..|+..
T Consensus 542 ~~C~~--Cgk~Vrlr-dm~~H~~~ 562 (567)
T PLN03086 542 APCDS--CGRSVMLK-EMDIHQIA 562 (567)
T ss_pred eEccc--cCCeeeeh-hHHHHHHH
Confidence 99955 99988765 67888754
No 18
>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A ....
Probab=98.05 E-value=2e-06 Score=52.02 Aligned_cols=24 Identities=58% Similarity=1.413 Sum_probs=15.3
Q ss_pred hhhhhhhcCCCCceeccCCCCCcccC
Q psy16882 58 LRTHVRIHTGDRPYVCPFDGCNKKFA 83 (318)
Q Consensus 58 L~~H~r~H~gekpf~C~~~~C~k~F~ 83 (318)
|..|+++|++++||.|++ |++.|.
T Consensus 2 l~~H~~~H~~~k~~~C~~--C~k~F~ 25 (26)
T PF13465_consen 2 LRRHMRTHTGEKPYKCPY--CGKSFS 25 (26)
T ss_dssp HHHHHHHHSSSSSEEESS--SSEEES
T ss_pred HHHHhhhcCCCCCCCCCC--CcCeeC
Confidence 566666666666666654 666664
No 19
>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A ....
Probab=97.85 E-value=8.2e-06 Score=49.35 Aligned_cols=25 Identities=60% Similarity=1.306 Sum_probs=17.1
Q ss_pred hhhhhhhhhcCCCceecccCCCCCccc
Q psy16882 27 KLKRHQLVHTGEKPFQCTFEGCGKRFS 53 (318)
Q Consensus 27 ~L~~H~~~H~~~kpy~C~~~~Cgk~F~ 53 (318)
+|.+||++|++++||.|+. |++.|.
T Consensus 1 ~l~~H~~~H~~~k~~~C~~--C~k~F~ 25 (26)
T PF13465_consen 1 NLRRHMRTHTGEKPYKCPY--CGKSFS 25 (26)
T ss_dssp HHHHHHHHHSSSSSEEESS--SSEEES
T ss_pred CHHHHhhhcCCCCCCCCCC--CcCeeC
Confidence 3666777777777777766 777664
No 20
>PHA00616 hypothetical protein
Probab=97.71 E-value=1.1e-05 Score=54.80 Aligned_cols=33 Identities=18% Similarity=0.393 Sum_probs=22.0
Q ss_pred cccCCccCcccccchhhhhhhhhhcCCCceecc
Q psy16882 12 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 44 (318)
Q Consensus 12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~ 44 (318)
||+|..||+.|...+.|.+|++.|++++++.|.
T Consensus 1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~ 33 (44)
T PHA00616 1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE 33 (44)
T ss_pred CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence 466666666666666666666666666666654
No 21
>PHA00732 hypothetical protein
Probab=97.55 E-value=5.1e-05 Score=58.30 Aligned_cols=47 Identities=30% Similarity=0.524 Sum_probs=31.6
Q ss_pred cccCCccCcccccchhhhhhhhh-hcCCCceecccCCCCCcccchhhhhhhhhhcC
Q psy16882 12 VHVCAECGKAFVESSKLKRHQLV-HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHT 66 (318)
Q Consensus 12 ~f~C~~Cgk~F~~~~~L~~H~~~-H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ 66 (318)
||.|..|++.|.+...|..|++. |. ++.|.. |++.|. .|..|++++.
T Consensus 1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~--CgKsF~---~l~~H~~~~~ 48 (79)
T PHA00732 1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPV--CNKSYR---RLNQHFYSQY 48 (79)
T ss_pred CccCCCCCCccCCHHHHHHHhhcccC---CCccCC--CCCEeC---ChhhhhcccC
Confidence 46777777777777777777763 54 246765 777776 4666765543
No 22
>PHA00616 hypothetical protein
Probab=97.42 E-value=6.3e-05 Score=51.15 Aligned_cols=32 Identities=25% Similarity=0.422 Sum_probs=17.6
Q ss_pred ceeccCCCCCcccCChhHHHHHHHHhcccccccc
Q psy16882 70 PYVCPFDGCNKKFAQSTNLKSHILTHAKAKLLKG 103 (318)
Q Consensus 70 pf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~~~c 103 (318)
||.|+. ||+.|...+.|..|++.|++++++.+
T Consensus 1 pYqC~~--CG~~F~~~s~l~~H~r~~hg~~~~~~ 32 (44)
T PHA00616 1 MYQCLR--CGGIFRKKKEVIEHLLSVHKQNKLTL 32 (44)
T ss_pred CCccch--hhHHHhhHHHHHHHHHHhcCCCccce
Confidence 355543 55555555555555555555555443
No 23
>KOG3993|consensus
Probab=97.34 E-value=9.5e-05 Score=72.10 Aligned_cols=53 Identities=34% Similarity=0.600 Sum_probs=46.4
Q ss_pred cccCCccCcccccchhhhhhhhhhcCC---------------------------------CceecccCCCCCcccchhhh
Q psy16882 12 VHVCAECGKAFVESSKLKRHQLVHTGE---------------------------------KPFQCTFEGCGKRFSLDFNL 58 (318)
Q Consensus 12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~---------------------------------kpy~C~~~~Cgk~F~~~~~L 58 (318)
-|+|+.|+|.|.-..+|..|.++|... -.|.|.+ |++.|.+...|
T Consensus 295 EYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~--C~KkFrRqAYL 372 (500)
T KOG3993|consen 295 EYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHT--CGKKFRRQAYL 372 (500)
T ss_pred eecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHH--hhhhhHHHHHH
Confidence 499999999999999999999999521 1388998 99999999999
Q ss_pred hhhhhhcC
Q psy16882 59 RTHVRIHT 66 (318)
Q Consensus 59 ~~H~r~H~ 66 (318)
+.|+.+|.
T Consensus 373 rKHqlthq 380 (500)
T KOG3993|consen 373 RKHQLTHQ 380 (500)
T ss_pred HHhHHhhh
Confidence 99988774
No 24
>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
Probab=97.22 E-value=0.00011 Score=69.28 Aligned_cols=54 Identities=35% Similarity=0.819 Sum_probs=43.6
Q ss_pred CCceecccCCCCCcccchhhhhhhhhh-c------------------CCCCceeccCCCCCcccCChhHHHHHHH
Q psy16882 38 EKPFQCTFEGCGKRFSLDFNLRTHVRI-H------------------TGDRPYVCPFDGCNKKFAQSTNLKSHIL 93 (318)
Q Consensus 38 ~kpy~C~~~~Cgk~F~~~~~L~~H~r~-H------------------~gekpf~C~~~~C~k~F~~~~~L~~H~r 93 (318)
++||+|++++|.|.+.....|+.|+.. | ...|||.|++ |+|+|.+...|+-|+.
T Consensus 347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCev--C~KRYKNlNGLKYHr~ 419 (423)
T COG5189 347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEV--CDKRYKNLNGLKYHRK 419 (423)
T ss_pred CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccc--cchhhccCccceeccc
Confidence 589999999999999999999999753 2 1247899987 9999988888888753
No 25
>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....
Probab=97.14 E-value=0.00016 Score=41.96 Aligned_cols=23 Identities=48% Similarity=0.806 Sum_probs=15.0
Q ss_pred ccCCccCcccccchhhhhhhhhh
Q psy16882 13 HVCAECGKAFVESSKLKRHQLVH 35 (318)
Q Consensus 13 f~C~~Cgk~F~~~~~L~~H~~~H 35 (318)
|+|+.|++.|.+...|..|++.|
T Consensus 1 y~C~~C~~~f~~~~~l~~H~~~H 23 (23)
T PF00096_consen 1 YKCPICGKSFSSKSNLKRHMRRH 23 (23)
T ss_dssp EEETTTTEEESSHHHHHHHHHHH
T ss_pred CCCCCCCCccCCHHHHHHHHhHC
Confidence 45666666666666666666653
No 26
>PHA00732 hypothetical protein
Probab=97.12 E-value=0.00031 Score=53.98 Aligned_cols=47 Identities=36% Similarity=0.725 Sum_probs=37.9
Q ss_pred ceecccCCCCCcccchhhhhhhhhh-cCCCCceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882 40 PFQCTFEGCGKRFSLDFNLRTHVRI-HTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 96 (318)
Q Consensus 40 py~C~~~~Cgk~F~~~~~L~~H~r~-H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~ 96 (318)
||.|.. |++.|.+...|..|++. |.+ +.|+. |++.|. .|..|.+++.
T Consensus 1 py~C~~--Cgk~F~s~s~Lk~H~r~~H~~---~~C~~--CgKsF~---~l~~H~~~~~ 48 (79)
T PHA00732 1 MFKCPI--CGFTTVTLFALKQHARRNHTL---TKCPV--CNKSYR---RLNQHFYSQY 48 (79)
T ss_pred CccCCC--CCCccCCHHHHHHHhhcccCC---CccCC--CCCEeC---ChhhhhcccC
Confidence 578987 99999999999999984 653 68966 999997 5788886554
No 27
>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A.
Probab=96.86 E-value=0.00076 Score=52.46 Aligned_cols=74 Identities=23% Similarity=0.403 Sum_probs=21.9
Q ss_pred cCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHH
Q psy16882 14 VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 93 (318)
Q Consensus 14 ~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r 93 (318)
.|..|+..|.....|..||...++... . ....+.....+..+.+.- -...+.|.+ |++.|.+...|..|++
T Consensus 1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~-~-----~~~~l~~~~~~~~~~~~~-~~~~~~C~~--C~~~f~s~~~l~~Hm~ 71 (100)
T PF12756_consen 1 QCLFCDESFSSVDDLLQHMKKKHGFDI-P-----DQKYLVDPNRLLNYLRKK-VKESFRCPY--CNKTFRSREALQEHMR 71 (100)
T ss_dssp -------------------------------------------------------SSEEBSS--SS-EESSHHHHHHHHH
T ss_pred Ccccccccccccccccccccccccccc-c-----cccccccccccccccccc-cCCCCCCCc--cCCCCcCHHHHHHHHc
Confidence 599999999999999999975443211 1 111222344444444332 123699988 9999999999999998
Q ss_pred Hhc
Q psy16882 94 THA 96 (318)
Q Consensus 94 ~H~ 96 (318)
.+.
T Consensus 72 ~~~ 74 (100)
T PF12756_consen 72 SKH 74 (100)
T ss_dssp HTT
T ss_pred Ccc
Confidence 753
No 28
>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins. Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.
Probab=96.85 E-value=0.0013 Score=46.55 Aligned_cols=49 Identities=31% Similarity=0.697 Sum_probs=24.2
Q ss_pred eecccCCCCCcccchhhhhhhhhh-cCCC-CceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882 41 FQCTFEGCGKRFSLDFNLRTHVRI-HTGD-RPYVCPFDGCNKKFAQSTNLKSHILTHA 96 (318)
Q Consensus 41 y~C~~~~Cgk~F~~~~~L~~H~r~-H~ge-kpf~C~~~~C~k~F~~~~~L~~H~r~H~ 96 (318)
|.|++ |++ ..+...|..|... |..+ +.+.||+ |...+. .+|..|+..++
T Consensus 3 f~CP~--C~~-~~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H 53 (54)
T PF05605_consen 3 FTCPY--CGK-GFSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH 53 (54)
T ss_pred cCCCC--CCC-ccCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence 45555 555 3334555555433 3332 3456655 655433 25666655443
No 29
>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....
Probab=96.80 E-value=0.001 Score=38.48 Aligned_cols=23 Identities=48% Similarity=1.074 Sum_probs=16.6
Q ss_pred eeccCCCCCcccCChhHHHHHHHHh
Q psy16882 71 YVCPFDGCNKKFAQSTNLKSHILTH 95 (318)
Q Consensus 71 f~C~~~~C~k~F~~~~~L~~H~r~H 95 (318)
|.|+. |++.|.+...|..|++.|
T Consensus 1 y~C~~--C~~~f~~~~~l~~H~~~H 23 (23)
T PF00096_consen 1 YKCPI--CGKSFSSKSNLKRHMRRH 23 (23)
T ss_dssp EEETT--TTEEESSHHHHHHHHHHH
T ss_pred CCCCC--CCCccCCHHHHHHHHhHC
Confidence 56755 777777777777777664
No 30
>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins. Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.
Probab=96.72 E-value=0.0013 Score=46.61 Aligned_cols=50 Identities=32% Similarity=0.559 Sum_probs=39.0
Q ss_pred cccCCccCcccccchhhhhhhh-hhcCC-CceecccCCCCCcccchhhhhhhhhhcC
Q psy16882 12 VHVCAECGKAFVESSKLKRHQL-VHTGE-KPFQCTFEGCGKRFSLDFNLRTHVRIHT 66 (318)
Q Consensus 12 ~f~C~~Cgk~F~~~~~L~~H~~-~H~~~-kpy~C~~~~Cgk~F~~~~~L~~H~r~H~ 66 (318)
.|.|++|++. .+...|..|.. .|..+ +.+.|++ |...+. .+|..|+..++
T Consensus 2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H 53 (54)
T PF05605_consen 2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH 53 (54)
T ss_pred CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence 5899999995 55688999987 45543 4699998 998655 48999988754
No 31
>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A ....
Probab=96.51 E-value=0.0012 Score=37.88 Aligned_cols=23 Identities=39% Similarity=0.806 Sum_probs=13.6
Q ss_pred ccCCccCcccccchhhhhhhhhh
Q psy16882 13 HVCAECGKAFVESSKLKRHQLVH 35 (318)
Q Consensus 13 f~C~~Cgk~F~~~~~L~~H~~~H 35 (318)
|.|++|++.|.+...|..|+..|
T Consensus 1 ~~C~~C~~~~~~~~~l~~H~~~~ 23 (24)
T PF13894_consen 1 FQCPICGKSFRSKSELRQHMRTH 23 (24)
T ss_dssp EE-SSTS-EESSHHHHHHHHHHH
T ss_pred CCCcCCCCcCCcHHHHHHHHHhh
Confidence 45666666666666666666654
No 32
>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A ....
Probab=96.50 E-value=0.0023 Score=36.66 Aligned_cols=24 Identities=38% Similarity=0.956 Sum_probs=16.6
Q ss_pred eeccCCCCCcccCChhHHHHHHHHhc
Q psy16882 71 YVCPFDGCNKKFAQSTNLKSHILTHA 96 (318)
Q Consensus 71 f~C~~~~C~k~F~~~~~L~~H~r~H~ 96 (318)
|.|++ |++.|.+...|..|+++|+
T Consensus 1 ~~C~~--C~~~~~~~~~l~~H~~~~H 24 (24)
T PF13894_consen 1 FQCPI--CGKSFRSKSELRQHMRTHH 24 (24)
T ss_dssp EE-SS--TS-EESSHHHHHHHHHHHS
T ss_pred CCCcC--CCCcCCcHHHHHHHHHhhC
Confidence 57766 8888888888888877664
No 33
>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B.
Probab=96.36 E-value=0.0013 Score=39.49 Aligned_cols=25 Identities=40% Similarity=0.743 Sum_probs=15.7
Q ss_pred cccCCccCcccccchhhhhhhhhhc
Q psy16882 12 VHVCAECGKAFVESSKLKRHQLVHT 36 (318)
Q Consensus 12 ~f~C~~Cgk~F~~~~~L~~H~~~H~ 36 (318)
+|.|..|++.|.+...|..|++.|.
T Consensus 1 ~~~C~~C~~~F~~~~~l~~H~~~h~ 25 (27)
T PF13912_consen 1 PFECDECGKTFSSLSALREHKRSHC 25 (27)
T ss_dssp SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred CCCCCccCCccCChhHHHHHhHHhc
Confidence 4566666666666666666666553
No 34
>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
Probab=96.24 E-value=0.0021 Score=60.92 Aligned_cols=53 Identities=30% Similarity=0.620 Sum_probs=45.7
Q ss_pred CCCcccCCc--cCcccccchhhhhhhh-hhc------------------CCCceecccCCCCCcccchhhhhhhhh
Q psy16882 9 GPRVHVCAE--CGKAFVESSKLKRHQL-VHT------------------GEKPFQCTFEGCGKRFSLDFNLRTHVR 63 (318)
Q Consensus 9 g~k~f~C~~--Cgk~F~~~~~L~~H~~-~H~------------------~~kpy~C~~~~Cgk~F~~~~~L~~H~r 63 (318)
+++||+|++ |.|.|....-|+-|+. -|. ..+||+|.+ |+|++.....|+.|+.
T Consensus 346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCev--C~KRYKNlNGLKYHr~ 419 (423)
T COG5189 346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEV--CDKRYKNLNGLKYHRK 419 (423)
T ss_pred cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccc--cchhhccCccceeccc
Confidence 569999987 9999999999999986 331 238999998 9999999999999964
No 35
>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.
Probab=95.76 E-value=0.0053 Score=42.97 Aligned_cols=29 Identities=31% Similarity=0.626 Sum_probs=11.9
Q ss_pred CceecccCCCCCcccchhhhhhhhhhcCCCC
Q psy16882 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 69 (318)
Q Consensus 39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gek 69 (318)
.|..|++ |+..+....+|.+|+.++++.+
T Consensus 23 ~PatCP~--C~a~~~~srnLrRHle~~H~~k 51 (54)
T PF09237_consen 23 QPATCPI--CGAVIRQSRNLRRHLEIRHFKK 51 (54)
T ss_dssp --EE-TT--T--EESSHHHHHHHHHHHTTTS
T ss_pred CCCCCCc--chhhccchhhHHHHHHHHhccc
Confidence 3455544 5555555555555554444433
No 36
>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B.
Probab=95.72 E-value=0.0057 Score=36.66 Aligned_cols=25 Identities=32% Similarity=0.758 Sum_probs=16.9
Q ss_pred ceeccCCCCCcccCChhHHHHHHHHhc
Q psy16882 70 PYVCPFDGCNKKFAQSTNLKSHILTHA 96 (318)
Q Consensus 70 pf~C~~~~C~k~F~~~~~L~~H~r~H~ 96 (318)
+|.|.. |++.|.+...|..|++.|.
T Consensus 1 ~~~C~~--C~~~F~~~~~l~~H~~~h~ 25 (27)
T PF13912_consen 1 PFECDE--CGKTFSSLSALREHKRSHC 25 (27)
T ss_dssp SEEETT--TTEEESSHHHHHHHHCTTT
T ss_pred CCCCCc--cCCccCChhHHHHHhHHhc
Confidence 466754 7777777777777776654
No 37
>smart00355 ZnF_C2H2 zinc finger.
Probab=95.46 E-value=0.0091 Score=34.46 Aligned_cols=24 Identities=46% Similarity=0.733 Sum_probs=16.1
Q ss_pred ccCCccCcccccchhhhhhhhhhc
Q psy16882 13 HVCAECGKAFVESSKLKRHQLVHT 36 (318)
Q Consensus 13 f~C~~Cgk~F~~~~~L~~H~~~H~ 36 (318)
|.|..|++.|.....|..|++.|.
T Consensus 1 ~~C~~C~~~f~~~~~l~~H~~~H~ 24 (26)
T smart00355 1 YRCPECGKVFKSKSALKEHMRTHX 24 (26)
T ss_pred CCCCCCcchhCCHHHHHHHHHHhc
Confidence 467777777777777777766553
No 38
>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.
Probab=94.85 E-value=0.027 Score=39.47 Aligned_cols=33 Identities=30% Similarity=0.583 Sum_probs=23.6
Q ss_pred CCCCceeccCCCCCcccCChhHHHHHHHHhccccc
Q psy16882 66 TGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKL 100 (318)
Q Consensus 66 ~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~ 100 (318)
..+.|-.|++ |+..+++..+|++|+..+|+.++
T Consensus 20 ~S~~PatCP~--C~a~~~~srnLrRHle~~H~~k~ 52 (54)
T PF09237_consen 20 QSEQPATCPI--CGAVIRQSRNLRRHLEIRHFKKP 52 (54)
T ss_dssp TTS--EE-TT--T--EESSHHHHHHHHHHHTTTS-
T ss_pred ccCCCCCCCc--chhhccchhhHHHHHHHHhcccC
Confidence 3568999988 99999999999999988887664
No 39
>smart00355 ZnF_C2H2 zinc finger.
Probab=94.14 E-value=0.043 Score=31.50 Aligned_cols=24 Identities=46% Similarity=0.890 Sum_probs=19.1
Q ss_pred eeccCCCCCcccCChhHHHHHHHHhc
Q psy16882 71 YVCPFDGCNKKFAQSTNLKSHILTHA 96 (318)
Q Consensus 71 f~C~~~~C~k~F~~~~~L~~H~r~H~ 96 (318)
|.|.. |++.|.....|..|++.|.
T Consensus 1 ~~C~~--C~~~f~~~~~l~~H~~~H~ 24 (26)
T smart00355 1 YRCPE--CGKVFKSKSALKEHMRTHX 24 (26)
T ss_pred CCCCC--CcchhCCHHHHHHHHHHhc
Confidence 56865 8888888888888888664
No 40
>COG5048 FOG: Zn-finger [General function prediction only]
Probab=93.80 E-value=0.047 Score=52.23 Aligned_cols=70 Identities=36% Similarity=0.578 Sum_probs=36.6
Q ss_pred cccCCccCcccccchhhhhhhh--hhcCC--CceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcc
Q psy16882 12 VHVCAECGKAFVESSKLKRHQL--VHTGE--KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKK 81 (318)
Q Consensus 12 ~f~C~~Cgk~F~~~~~L~~H~~--~H~~~--kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~ 81 (318)
++.|..|...|.....|.+|.+ .|.++ +++.|++..|++.|.....+..|...|.+..++.|....|...
T Consensus 289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (467)
T COG5048 289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSK 362 (467)
T ss_pred CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccc
Confidence 4555555555555555555555 45555 5555552225555555555555555555555554444333333
No 41
>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A.
Probab=93.65 E-value=0.027 Score=33.00 Aligned_cols=22 Identities=27% Similarity=0.611 Sum_probs=13.7
Q ss_pred ccCCccCcccccchhhhhhhhh
Q psy16882 13 HVCAECGKAFVESSKLKRHQLV 34 (318)
Q Consensus 13 f~C~~Cgk~F~~~~~L~~H~~~ 34 (318)
|.|.+|++.|.+...|..|++.
T Consensus 1 ~~C~~C~~~f~s~~~~~~H~~s 22 (25)
T PF12874_consen 1 FYCDICNKSFSSENSLRQHLRS 22 (25)
T ss_dssp EEETTTTEEESSHHHHHHHHTT
T ss_pred CCCCCCCCCcCCHHHHHHHHCc
Confidence 4566666666666666666653
No 42
>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A.
Probab=92.92 E-value=0.063 Score=31.37 Aligned_cols=23 Identities=30% Similarity=0.868 Sum_probs=17.3
Q ss_pred eeccCCCCCcccCChhHHHHHHHHh
Q psy16882 71 YVCPFDGCNKKFAQSTNLKSHILTH 95 (318)
Q Consensus 71 f~C~~~~C~k~F~~~~~L~~H~r~H 95 (318)
|.|.+ |++.|.+...|..|++.+
T Consensus 1 ~~C~~--C~~~f~s~~~~~~H~~s~ 23 (25)
T PF12874_consen 1 FYCDI--CNKSFSSENSLRQHLRSK 23 (25)
T ss_dssp EEETT--TTEEESSHHHHHHHHTTH
T ss_pred CCCCC--CCCCcCCHHHHHHHHCcC
Confidence 56766 888888888888887643
No 43
>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length. The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.
Probab=92.54 E-value=0.057 Score=32.46 Aligned_cols=22 Identities=32% Similarity=0.637 Sum_probs=14.2
Q ss_pred ccCCccCcccccchhhhhhhhh
Q psy16882 13 HVCAECGKAFVESSKLKRHQLV 34 (318)
Q Consensus 13 f~C~~Cgk~F~~~~~L~~H~~~ 34 (318)
|.|..|++.|.+...|..|++.
T Consensus 2 ~~C~~C~k~f~~~~~~~~H~~s 23 (27)
T PF12171_consen 2 FYCDACDKYFSSENQLKQHMKS 23 (27)
T ss_dssp CBBTTTTBBBSSHHHHHCCTTS
T ss_pred CCcccCCCCcCCHHHHHHHHcc
Confidence 5566666666666666666653
No 44
>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A.
Probab=92.30 E-value=0.13 Score=29.90 Aligned_cols=23 Identities=39% Similarity=0.847 Sum_probs=15.0
Q ss_pred eeccCCCCCcccCChhHHHHHHHHhc
Q psy16882 71 YVCPFDGCNKKFAQSTNLKSHILTHA 96 (318)
Q Consensus 71 f~C~~~~C~k~F~~~~~L~~H~r~H~ 96 (318)
|+|++ |+.... ...|.+|++.|+
T Consensus 1 y~C~~--C~y~t~-~~~l~~H~~~~H 23 (24)
T PF13909_consen 1 YKCPH--CSYSTS-KSNLKRHLKRHH 23 (24)
T ss_dssp EE-SS--SS-EES-HHHHHHHHHHHH
T ss_pred CCCCC--CCCcCC-HHHHHHHHHhhC
Confidence 56765 877776 777888877754
No 45
>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A.
Probab=92.22 E-value=0.067 Score=31.09 Aligned_cols=22 Identities=36% Similarity=0.566 Sum_probs=11.5
Q ss_pred ccCCccCcccccchhhhhhhhhh
Q psy16882 13 HVCAECGKAFVESSKLKRHQLVH 35 (318)
Q Consensus 13 f~C~~Cgk~F~~~~~L~~H~~~H 35 (318)
|+|+.|..... ...|.+|++.|
T Consensus 1 y~C~~C~y~t~-~~~l~~H~~~~ 22 (24)
T PF13909_consen 1 YKCPHCSYSTS-KSNLKRHLKRH 22 (24)
T ss_dssp EE-SSSS-EES-HHHHHHHHHHH
T ss_pred CCCCCCCCcCC-HHHHHHHHHhh
Confidence 45666665555 55666666554
No 46
>COG5048 FOG: Zn-finger [General function prediction only]
Probab=92.00 E-value=0.082 Score=50.59 Aligned_cols=100 Identities=29% Similarity=0.482 Sum_probs=66.9
Q ss_pred Chhchh--hh-CC--CcccCC--ccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhh-----hcCCC
Q psy16882 1 MRKHLH--TH-GP--RVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-----IHTGD 68 (318)
Q Consensus 1 Lr~Hlr--tH-g~--k~f~C~--~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r-----~H~ge 68 (318)
|..|.+ .| ++ +++.|+ .|++.|.+...+..|...|.+..++.|....|...+.....-..+.. .-...
T Consensus 305 l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (467)
T COG5048 305 LTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKND 384 (467)
T ss_pred ccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccCCCCccchhhccCccCC
Confidence 456777 68 77 999999 79999999999999999999988877776556655554433211111 11223
Q ss_pred CceeccCCCCCcccCChhHHHHHHHHhccccc
Q psy16882 69 RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKL 100 (318)
Q Consensus 69 kpf~C~~~~C~k~F~~~~~L~~H~r~H~~~k~ 100 (318)
..+.|....|...+.+...+..|...|.....
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (467)
T COG5048 385 KKSETLSNSCIRNFKRDSNLSLHIITHLSFRP 416 (467)
T ss_pred ccccccccchhhhhccccccccccccccccCC
Confidence 44555544566666666666666666655543
No 47
>KOG4173|consensus
Probab=89.68 E-value=0.085 Score=47.38 Aligned_cols=81 Identities=28% Similarity=0.613 Sum_probs=63.6
Q ss_pred CcccCCc--cCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhh-hc---------CCCCceeccCCCC
Q psy16882 11 RVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IH---------TGDRPYVCPFDGC 78 (318)
Q Consensus 11 k~f~C~~--Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r-~H---------~gekpf~C~~~~C 78 (318)
+.|.|++ |...|.....+..|..+-++ -.|.. |.+.|.+...|..|+. +| .|..-|.|-+++|
T Consensus 78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~--C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgC 152 (253)
T KOG4173|consen 78 PAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSF--CKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGC 152 (253)
T ss_pred ccccccccchHHHHhhhhhHHHhhhhccc---chhHH--HHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhh
Confidence 4578986 88888888877888753322 36887 9999999999999974 34 3455699999999
Q ss_pred CcccCChhHHHHHH-HHhc
Q psy16882 79 NKKFAQSTNLKSHI-LTHA 96 (318)
Q Consensus 79 ~k~F~~~~~L~~H~-r~H~ 96 (318)
+..|.+...-..|+ ++|.
T Consensus 153 t~KFkT~r~RkdH~I~~Hk 171 (253)
T KOG4173|consen 153 TEKFKTSRDRKDHMIRMHK 171 (253)
T ss_pred hhhhhhhhhhhhHHHHhcc
Confidence 99999999999997 5564
No 48
>PRK04860 hypothetical protein; Provisional
Probab=89.29 E-value=0.27 Score=42.77 Aligned_cols=36 Identities=28% Similarity=0.834 Sum_probs=20.7
Q ss_pred ceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccC
Q psy16882 40 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFA 83 (318)
Q Consensus 40 py~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~ 83 (318)
+|.|. |+. ....+.+|.++|+++++|.|.. |+..|.
T Consensus 119 ~Y~C~---C~~---~~~~~rrH~ri~~g~~~YrC~~--C~~~l~ 154 (160)
T PRK04860 119 PYRCK---CQE---HQLTVRRHNRVVRGEAVYRCRR--CGETLV 154 (160)
T ss_pred EEEcC---CCC---eeCHHHHHHHHhcCCccEECCC--CCceeE
Confidence 35663 554 4455566666666666666633 666554
No 49
>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length. The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.
Probab=86.43 E-value=0.36 Score=28.87 Aligned_cols=21 Identities=38% Similarity=0.823 Sum_probs=12.0
Q ss_pred eecccCCCCCcccchhhhhhhhh
Q psy16882 41 FQCTFEGCGKRFSLDFNLRTHVR 63 (318)
Q Consensus 41 y~C~~~~Cgk~F~~~~~L~~H~r 63 (318)
|.|.. |++.|.+...|..|++
T Consensus 2 ~~C~~--C~k~f~~~~~~~~H~~ 22 (27)
T PF12171_consen 2 FYCDA--CDKYFSSENQLKQHMK 22 (27)
T ss_dssp CBBTT--TTBBBSSHHHHHCCTT
T ss_pred CCccc--CCCCcCCHHHHHHHHc
Confidence 44554 6666666666655554
No 50
>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type
Probab=85.34 E-value=0.51 Score=28.07 Aligned_cols=20 Identities=30% Similarity=0.845 Sum_probs=15.4
Q ss_pred ccCCccCcccccchhhhhhhh
Q psy16882 13 HVCAECGKAFVESSKLKRHQL 33 (318)
Q Consensus 13 f~C~~Cgk~F~~~~~L~~H~~ 33 (318)
..|+.||+.| ....|..|+.
T Consensus 3 ~~C~~CgR~F-~~~~l~~H~~ 22 (25)
T PF13913_consen 3 VPCPICGRKF-NPDRLEKHEK 22 (25)
T ss_pred CcCCCCCCEE-CHHHHHHHHH
Confidence 4688899888 5677888865
No 51
>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type
Probab=82.72 E-value=1.1 Score=26.60 Aligned_cols=21 Identities=33% Similarity=0.782 Sum_probs=15.3
Q ss_pred eeccCCCCCcccCChhHHHHHHHH
Q psy16882 71 YVCPFDGCNKKFAQSTNLKSHILT 94 (318)
Q Consensus 71 f~C~~~~C~k~F~~~~~L~~H~r~ 94 (318)
..|++ |++.| ..+.|..|+.+
T Consensus 3 ~~C~~--CgR~F-~~~~l~~H~~~ 23 (25)
T PF13913_consen 3 VPCPI--CGRKF-NPDRLEKHEKI 23 (25)
T ss_pred CcCCC--CCCEE-CHHHHHHHHHh
Confidence 46766 88888 66778888654
No 52
>smart00451 ZnF_U1 U1-like zinc finger. Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.
Probab=82.27 E-value=0.68 Score=29.01 Aligned_cols=22 Identities=18% Similarity=0.418 Sum_probs=16.0
Q ss_pred cccCCccCcccccchhhhhhhh
Q psy16882 12 VHVCAECGKAFVESSKLKRHQL 33 (318)
Q Consensus 12 ~f~C~~Cgk~F~~~~~L~~H~~ 33 (318)
+|.|.+|++.|.....+..|+.
T Consensus 3 ~~~C~~C~~~~~~~~~~~~H~~ 24 (35)
T smart00451 3 GFYCKLCNVTFTDEISVEAHLK 24 (35)
T ss_pred CeEccccCCccCCHHHHHHHHC
Confidence 4667777777777777777765
No 53
>KOG2231|consensus
Probab=78.47 E-value=1.5 Score=46.12 Aligned_cols=76 Identities=22% Similarity=0.456 Sum_probs=37.6
Q ss_pred CCccCcccccchhhhhhhh-hhcCCCceecccC-------CCCCcccchhhhhhhhhhcC-CCC----ceeccCCCCCcc
Q psy16882 15 CAECGKAFVESSKLKRHQL-VHTGEKPFQCTFE-------GCGKRFSLDFNLRTHVRIHT-GDR----PYVCPFDGCNKK 81 (318)
Q Consensus 15 C~~Cgk~F~~~~~L~~H~~-~H~~~kpy~C~~~-------~Cgk~F~~~~~L~~H~r~H~-gek----pf~C~~~~C~k~ 81 (318)
|.+| ..|.+...|+.|+. .|.. +.|..- .|.....+...|+.|+..-. +++ .-.|.+ |...
T Consensus 118 ~~~c-~~~~s~~~Lk~H~~~~H~~---~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~--C~~~ 191 (669)
T KOG2231|consen 118 CLHC-TEFKSVENLKNHMRDQHKL---HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKF--CHER 191 (669)
T ss_pred Cccc-cchhHHHHHHHHHHHhhhh---hccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchh--hhhh
Confidence 3344 34447788888885 4432 222220 01122233445555654321 111 134655 7777
Q ss_pred cCChhHHHHHHHHhc
Q psy16882 82 FAQSTNLKSHILTHA 96 (318)
Q Consensus 82 F~~~~~L~~H~r~H~ 96 (318)
|-....|.+|++.++
T Consensus 192 fld~~el~rH~~~~h 206 (669)
T KOG2231|consen 192 FLDDDELYRHLRFDH 206 (669)
T ss_pred hccHHHHHHhhccce
Confidence 777777777766544
No 54
>smart00451 ZnF_U1 U1-like zinc finger. Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.
Probab=77.87 E-value=1.8 Score=27.01 Aligned_cols=23 Identities=22% Similarity=0.691 Sum_probs=19.2
Q ss_pred ceeccCCCCCcccCChhHHHHHHHH
Q psy16882 70 PYVCPFDGCNKKFAQSTNLKSHILT 94 (318)
Q Consensus 70 pf~C~~~~C~k~F~~~~~L~~H~r~ 94 (318)
+|.|.+ |++.|.....+..|+..
T Consensus 3 ~~~C~~--C~~~~~~~~~~~~H~~g 25 (35)
T smart00451 3 GFYCKL--CNVTFTDEISVEAHLKG 25 (35)
T ss_pred CeEccc--cCCccCCHHHHHHHHCh
Confidence 578977 99999988889999753
No 55
>KOG1146|consensus
Probab=77.75 E-value=1.3 Score=49.52 Aligned_cols=76 Identities=24% Similarity=0.462 Sum_probs=53.0
Q ss_pred CCccCcccccchhhhhhhh-hhcCCCceecccCCCCCcccchhhhhhhhhh-c------------------------CCC
Q psy16882 15 CAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI-H------------------------TGD 68 (318)
Q Consensus 15 C~~Cgk~F~~~~~L~~H~~-~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~-H------------------------~ge 68 (318)
|.-|+..|.+...+..|+. .|...+.|.|+. |+..|.....|..|||. | .+.
T Consensus 439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpk--c~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~ 516 (1406)
T KOG1146|consen 439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPK--CNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPG 516 (1406)
T ss_pred ccchhhhhhhhcccccceeeeecccccccCCc--cchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCC
Confidence 3445555555555555554 455556677776 77777777777777776 1 123
Q ss_pred CceeccCCCCCcccCChhHHHHHHHH
Q psy16882 69 RPYVCPFDGCNKKFAQSTNLKSHILT 94 (318)
Q Consensus 69 kpf~C~~~~C~k~F~~~~~L~~H~r~ 94 (318)
++|.|.. |...+.....|..|++.
T Consensus 517 ~p~~C~~--C~~stttng~LsihlqS 540 (1406)
T KOG1146|consen 517 KPYPCRA--CNYSTTTNGNLSIHLQS 540 (1406)
T ss_pred Cccccee--eeeeeecchHHHHHHHH
Confidence 6789966 99999999999999864
No 56
>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A.
Probab=76.96 E-value=1.3 Score=33.96 Aligned_cols=22 Identities=36% Similarity=0.851 Sum_probs=12.1
Q ss_pred eecccCCCCCcccchhhhhhhhhh
Q psy16882 41 FQCTFEGCGKRFSLDFNLRTHVRI 64 (318)
Q Consensus 41 y~C~~~~Cgk~F~~~~~L~~H~r~ 64 (318)
+.|.+ |++.|.+...|..|++.
T Consensus 51 ~~C~~--C~~~f~s~~~l~~Hm~~ 72 (100)
T PF12756_consen 51 FRCPY--CNKTFRSREALQEHMRS 72 (100)
T ss_dssp EEBSS--SS-EESSHHHHHHHHHH
T ss_pred CCCCc--cCCCCcCHHHHHHHHcC
Confidence 35555 66666666666666554
No 57
>PRK04860 hypothetical protein; Provisional
Probab=70.85 E-value=2.8 Score=36.49 Aligned_cols=31 Identities=26% Similarity=0.577 Sum_probs=26.7
Q ss_pred cchhhhhhhhhhcCCCceecccCCCCCcccchh
Q psy16882 24 ESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF 56 (318)
Q Consensus 24 ~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~ 56 (318)
....+.+|.++|+++++|.|.. |+..|....
T Consensus 127 ~~~~~rrH~ri~~g~~~YrC~~--C~~~l~~~~ 157 (160)
T PRK04860 127 HQLTVRRHNRVVRGEAVYRCRR--CGETLVFKG 157 (160)
T ss_pred eeCHHHHHHHHhcCCccEECCC--CCceeEEec
Confidence 6678899999999999999987 999886543
No 58
>KOG4173|consensus
Probab=69.92 E-value=0.99 Score=40.71 Aligned_cols=55 Identities=31% Similarity=0.655 Sum_probs=45.5
Q ss_pred cccCCccCcccccchhhhhhhh-hh---------cCCCceecccCCCCCcccchhhhhhhhh-hcC
Q psy16882 12 VHVCAECGKAFVESSKLKRHQL-VH---------TGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHT 66 (318)
Q Consensus 12 ~f~C~~Cgk~F~~~~~L~~H~~-~H---------~~~kpy~C~~~~Cgk~F~~~~~L~~H~r-~H~ 66 (318)
...|..|.+.|.+...|..|+. .| .|..-|.|-+++|+-.|.+......|+- .|.
T Consensus 106 ~~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk 171 (253)
T KOG4173|consen 106 GNSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMHK 171 (253)
T ss_pred cchhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhcc
Confidence 3489999999999999999986 34 2344599999999999999999999974 453
No 59
>KOG2893|consensus
Probab=64.13 E-value=2.3 Score=39.30 Aligned_cols=49 Identities=29% Similarity=0.692 Sum_probs=35.1
Q ss_pred CceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHH-HHHhc
Q psy16882 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH-ILTHA 96 (318)
Q Consensus 39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H-~r~H~ 96 (318)
++| |=+ |++.|....-|.+|++. +-|+|-+ |.+...+--.|.-| +++|.
T Consensus 10 kpw-cwy--cnrefddekiliqhqka----khfkchi--chkkl~sgpglsihcmqvhk 59 (341)
T KOG2893|consen 10 KPW-CWY--CNREFDDEKILIQHQKA----KHFKCHI--CHKKLFSGPGLSIHCMQVHK 59 (341)
T ss_pred Cce-eee--cccccchhhhhhhhhhh----ccceeee--ehhhhccCCCceeehhhhhh
Confidence 454 556 88899999888888763 4589977 98776666667666 45554
No 60
>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function.
Probab=61.14 E-value=4.6 Score=36.63 Aligned_cols=24 Identities=21% Similarity=0.368 Sum_probs=15.7
Q ss_pred CCcccCCccCcccccchhhhhhhh
Q psy16882 10 PRVHVCAECGKAFVESSKLKRHQL 33 (318)
Q Consensus 10 ~k~f~C~~Cgk~F~~~~~L~~H~~ 33 (318)
++.+.|++|++.|.++.-.....+
T Consensus 3 ~k~~~CPvC~~~F~~~~vrs~~~r 26 (214)
T PF09986_consen 3 DKKITCPVCGKEFKTKKVRSGKIR 26 (214)
T ss_pred CCceECCCCCCeeeeeEEEcCCce
Confidence 355678888888877655444443
No 61
>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center. The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.
Probab=57.21 E-value=6.9 Score=24.64 Aligned_cols=10 Identities=40% Similarity=1.045 Sum_probs=5.4
Q ss_pred ccCCccCccc
Q psy16882 13 HVCAECGKAF 22 (318)
Q Consensus 13 f~C~~Cgk~F 22 (318)
|.|..||..+
T Consensus 2 ~~C~~CGy~y 11 (33)
T cd00350 2 YVCPVCGYIY 11 (33)
T ss_pred EECCCCCCEE
Confidence 4555665444
No 62
>KOG2231|consensus
Probab=56.12 E-value=9.4 Score=40.33 Aligned_cols=73 Identities=25% Similarity=0.466 Sum_probs=47.9
Q ss_pred ccCcccccchhhhhhhhhh-cCCCc----eecccCCCCCcccchhhhhhhhhhcCCCCceeccC----CCCCcccCChhH
Q psy16882 17 ECGKAFVESSKLKRHQLVH-TGEKP----FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF----DGCNKKFAQSTN 87 (318)
Q Consensus 17 ~Cgk~F~~~~~L~~H~~~H-~~~kp----y~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~----~~C~k~F~~~~~ 87 (318)
.+.+.|. ...|..|+..- .+++. -.|.. |...|.....|.+|++.++ |.|.+ .+++..|...+.
T Consensus 155 ~e~k~Yt-~~el~~h~~~gd~d~~s~rGhp~C~~--C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~d 227 (669)
T KOG2231|consen 155 NERKLYT-RAELNLHLMFGDPDDESCRGHPLCKF--CHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDD 227 (669)
T ss_pred eeeeheh-HHHHHHHHhcCCCccccccCCccchh--hhhhhccHHHHHHhhccce----eheeecCcccccchhcccchH
Confidence 3455554 45566776632 11221 35776 9999999999999988654 44444 224566788889
Q ss_pred HHHHHHHhc
Q psy16882 88 LKSHILTHA 96 (318)
Q Consensus 88 L~~H~r~H~ 96 (318)
|..|.+.+|
T Consensus 228 Le~HfR~~H 236 (669)
T KOG2231|consen 228 LEEHFRKGH 236 (669)
T ss_pred HHHHhhhcC
Confidence 999988766
No 63
>KOG2893|consensus
Probab=56.04 E-value=4.3 Score=37.55 Aligned_cols=45 Identities=29% Similarity=0.640 Sum_probs=36.2
Q ss_pred CCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhh-hhhc
Q psy16882 15 CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH-VRIH 65 (318)
Q Consensus 15 C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H-~r~H 65 (318)
|=+|++.|....-|..|.+.. -|+|.+ |.+...+--.|..| |++|
T Consensus 13 cwycnrefddekiliqhqkak----hfkchi--chkkl~sgpglsihcmqvh 58 (341)
T KOG2893|consen 13 CWYCNREFDDEKILIQHQKAK----HFKCHI--CHKKLFSGPGLSIHCMQVH 58 (341)
T ss_pred eeecccccchhhhhhhhhhhc----cceeee--ehhhhccCCCceeehhhhh
Confidence 788999999999999998743 489998 99877777777777 4555
No 64
>PF06286 Coleoptericin: Coleoptericin; InterPro: IPR009382 This family consists of several insect coleoptericin, acaloleptin, holotricin and rhinocerosin proteins which are all known to be antibacterial proteins []. These all appear to be short, glycine-rich molecules, inducible by infection.; GO: 0042742 defense response to bacterium, 0005576 extracellular region
Probab=53.78 E-value=18 Score=30.16 Aligned_cols=88 Identities=22% Similarity=0.211 Sum_probs=56.3
Q ss_pred CCCCccCCchhhhhhccccccCCCCCCCCCCCCchhhhhhhhccCCCCCCccchhhhhccccccccccccccCCCCCCCC
Q psy16882 216 SNPEFEQEHEYEDCILTEQEIKHEPIPGIDLSDPKQLAEFASVNNYRPGNNKIKVKRQVGLSAANEVVPNVQNNGSSGAN 295 (318)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (318)
.+++|.++--|.++-.-...+|-+-+-++||.|-....+.--. |+.+|+--..|.|-+.|++|..++-..+
T Consensus 24 y~~~y~~~~~~~~~r~~~~~~PaE~~~~~~~~de~~~em~~~~---------ir~rRSLQpGAPn~p~p~~q~p~~vsp~ 94 (143)
T PF06286_consen 24 YEPDYPPDAQYRLRRSEPQDSPAELNEYVDITDEPEAEMPYEY---------IRERRSLQPGAPNFPMPGSQLPWSVSPN 94 (143)
T ss_pred cCCCCCcchhhhhhcccccCChHHhhhccccccCcchhhhHHH---------HHHHhccCCCCCCCCCCcccCCcccCcc
Confidence 4455666556766655556777778889999998766555422 5778888888888888888766543222
Q ss_pred CCC---CCCcccccCCCCcc
Q psy16882 296 SGN---NLDRTIACPHKGCS 312 (318)
Q Consensus 296 ~~~---~~~~~~~~~~~~~~ 312 (318)
-.. ++.-+|---|||=+
T Consensus 95 i~r~~~NT~a~I~~q~kg~n 114 (143)
T PF06286_consen 95 ISRDGGNTRAQINIQHKGDN 114 (143)
T ss_pred hhccCCCcceeeehhhcccc
Confidence 111 24445656666543
No 65
>KOG2186|consensus
Probab=50.53 E-value=7.5 Score=36.20 Aligned_cols=51 Identities=24% Similarity=0.551 Sum_probs=36.2
Q ss_pred cccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCC
Q psy16882 12 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 67 (318)
Q Consensus 12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~g 67 (318)
-|.|..||....- ..+.+|+.+-++ .-|.|.- |++.|.. ..+..|..--+.
T Consensus 3 ~FtCnvCgEsvKK-p~vekH~srCrn-~~fSCID--C~k~F~~-~sYknH~kCITE 53 (276)
T KOG2186|consen 3 FFTCNVCGESVKK-PQVEKHMSRCRN-AYFSCID--CGKTFER-VSYKNHTKCITE 53 (276)
T ss_pred EEehhhhhhhccc-cchHHHHHhccC-CeeEEee--ccccccc-chhhhhhhhcch
Confidence 3789999988764 446778876665 5688864 9988887 667777665443
No 66
>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=49.66 E-value=12 Score=36.55 Aligned_cols=16 Identities=44% Similarity=0.582 Sum_probs=8.6
Q ss_pred CCCcccchhhhhhhhh
Q psy16882 48 CGKRFSLDFNLRTHVR 63 (318)
Q Consensus 48 Cgk~F~~~~~L~~H~r 63 (318)
|...|.+...|..|+|
T Consensus 226 C~~~FYdDDEL~~HcR 241 (493)
T COG5236 226 CKIYFYDDDELRRHCR 241 (493)
T ss_pred ccceecChHHHHHHHH
Confidence 5555555555555554
No 67
>KOG1146|consensus
Probab=49.09 E-value=4.9 Score=45.21 Aligned_cols=78 Identities=17% Similarity=0.258 Sum_probs=55.4
Q ss_pred cccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhh-----------------cCCCCceecc
Q psy16882 12 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI-----------------HTGDRPYVCP 74 (318)
Q Consensus 12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~-----------------H~gekpf~C~ 74 (318)
-+.|..|.+.|.....+. |+-. ..+|.|.. |.-.|.....|..|.+. |..-..| |.
T Consensus 1260 e~~c~~~~~~~~~~~~~~-~l~~---~~~~~~~~--~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~-c~ 1332 (1406)
T KOG1146|consen 1260 EGECGAVDELLTPSFGIS-TLDV---THRYLCRQ--CKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH-CL 1332 (1406)
T ss_pred cchhhhccccccCcccee-eccc---chhHHHHH--HHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccccc-ch
Confidence 367888888887777666 5432 23577876 88888888888777642 2223456 98
Q ss_pred CCCCCcccCChhHHHHHHHH-hccc
Q psy16882 75 FDGCNKKFAQSTNLKSHILT-HAKA 98 (318)
Q Consensus 75 ~~~C~k~F~~~~~L~~H~r~-H~~~ 98 (318)
+ |...|+....|..|++. ++..
T Consensus 1333 ~--c~~~~~~~~alqihm~~~~~~~ 1355 (1406)
T KOG1146|consen 1333 A--CEVLLSGREALQIHMRSSAHRR 1355 (1406)
T ss_pred H--HHhhcchhHHHHHHHHHhhhcc
Confidence 8 99999999999999975 4443
No 68
>PRK09678 DNA-binding transcriptional regulator; Provisional
Probab=49.06 E-value=9.6 Score=28.73 Aligned_cols=45 Identities=20% Similarity=0.275 Sum_probs=27.5
Q ss_pred ccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhh
Q psy16882 13 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR 59 (318)
Q Consensus 13 f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~ 59 (318)
+.|+.||.......+-..+.. ..++-+.|.-.+||.+|.....+.
T Consensus 2 m~CP~Cg~~a~irtSr~~s~~--~~~~Y~qC~N~eCg~tF~t~es~s 46 (72)
T PRK09678 2 FHCPLCQHAAHARTSRYITDT--TKERYHQCQNVNCSATFITYESVQ 46 (72)
T ss_pred ccCCCCCCccEEEEChhcChh--hheeeeecCCCCCCCEEEEEEEEE
Confidence 578899876644333222211 445668887556998888765543
No 69
>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Probab=49.00 E-value=11 Score=30.53 Aligned_cols=30 Identities=37% Similarity=0.869 Sum_probs=20.7
Q ss_pred eecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCCh
Q psy16882 41 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQS 85 (318)
Q Consensus 41 y~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~ 85 (318)
..|+. ||+.|.. | +..|..||. ||..|.-.
T Consensus 10 R~Cp~--CG~kFYD---L--------nk~PivCP~--CG~~~~~~ 39 (108)
T PF09538_consen 10 RTCPS--CGAKFYD---L--------NKDPIVCPK--CGTEFPPE 39 (108)
T ss_pred ccCCC--Ccchhcc---C--------CCCCccCCC--CCCccCcc
Confidence 46766 8888864 2 235778876 88888765
No 70
>PF11789 zf-Nse: Zinc-finger of the MIZ type in Nse subunit; PDB: 2YU4_A 3HTK_C.
Probab=46.57 E-value=22 Score=25.37 Aligned_cols=35 Identities=29% Similarity=0.681 Sum_probs=17.8
Q ss_pred CceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCC
Q psy16882 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCN 79 (318)
Q Consensus 39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~ 79 (318)
.|++... |+..|....-+. ++ ...+...||+.+|+
T Consensus 23 ~PV~s~~--C~H~fek~aI~~-~i---~~~~~~~CPv~GC~ 57 (57)
T PF11789_consen 23 DPVKSKK--CGHTFEKEAILQ-YI---QRNGSKRCPVAGCN 57 (57)
T ss_dssp SEEEESS--S--EEEHHHHHH-HC---TTTS-EE-SCCC-S
T ss_pred CCcCcCC--CCCeecHHHHHH-HH---HhcCCCCCCCCCCC
Confidence 4666655 888887654443 33 23466888886664
No 71
>PF07800 DUF1644: Protein of unknown function (DUF1644); InterPro: IPR012866 This family consists of sequences found in a number of hypothetical plant proteins of unknown function. The region of interest contains nine highly conserved cysteine residues and is approximately 160 amino acids in length, which probably represent a zinc-binding domain.
Probab=46.36 E-value=46 Score=28.96 Aligned_cols=39 Identities=18% Similarity=0.364 Sum_probs=26.1
Q ss_pred hhhhcCCCCceeccCCCCCcccCChhHHHHHHHH-hccccc
Q psy16882 61 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT-HAKAKL 100 (318)
Q Consensus 61 H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~-H~~~k~ 100 (318)
-.|.+...|+-.|..+.|.++ .+...|++|.+. |...+|
T Consensus 98 ~AR~~LN~K~RsC~~e~C~F~-GtY~eLrKHar~~HP~~rP 137 (162)
T PF07800_consen 98 PARRFLNAKKRSCSQESCSFS-GTYSELRKHARSEHPSARP 137 (162)
T ss_pred HHHHHhccCCccCcccccccc-cCHHHHHHHHHhhCCCCCC
Confidence 355666777778877777764 456678888764 655554
No 72
>PRK00464 nrdR transcriptional regulator NrdR; Validated
Probab=45.58 E-value=9.6 Score=32.94 Aligned_cols=14 Identities=43% Similarity=0.743 Sum_probs=7.8
Q ss_pred eecccCCCCCcccchh
Q psy16882 41 FQCTFEGCGKRFSLDF 56 (318)
Q Consensus 41 y~C~~~~Cgk~F~~~~ 56 (318)
++|+. ||++|....
T Consensus 29 ~~c~~--c~~~f~~~e 42 (154)
T PRK00464 29 RECLA--CGKRFTTFE 42 (154)
T ss_pred eeccc--cCCcceEeE
Confidence 56654 666665543
No 73
>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]
Probab=45.24 E-value=8.3 Score=27.67 Aligned_cols=25 Identities=28% Similarity=0.555 Sum_probs=15.0
Q ss_pred CCCcccCCccCcccccchhhhhhhh
Q psy16882 9 GPRVHVCAECGKAFVESSKLKRHQL 33 (318)
Q Consensus 9 g~k~f~C~~Cgk~F~~~~~L~~H~~ 33 (318)
|+..+.|+-|+..|.....+.+|..
T Consensus 14 GE~~lrCPRC~~~FR~~K~Y~RHVN 38 (65)
T COG4049 14 GEEFLRCPRCGMVFRRRKDYIRHVN 38 (65)
T ss_pred CceeeeCCchhHHHHHhHHHHHHhh
Confidence 4555666666666666666666654
No 74
>smart00614 ZnF_BED BED zinc finger. DNA-binding domain in chromatin-boundary-element-binding proteins and transposases
Probab=42.70 E-value=15 Score=25.13 Aligned_cols=24 Identities=42% Similarity=0.685 Sum_probs=17.6
Q ss_pred cccCCccCcccccc-----hhhhhhhh-hh
Q psy16882 12 VHVCAECGKAFVES-----SKLKRHQL-VH 35 (318)
Q Consensus 12 ~f~C~~Cgk~F~~~-----~~L~~H~~-~H 35 (318)
.-.|..|++.+... +.|.+|+. .|
T Consensus 18 ~a~C~~C~~~l~~~~~~gTs~L~rHl~~~h 47 (50)
T smart00614 18 RAKCKYCGKKLSRSSKGGTSNLRRHLRRKH 47 (50)
T ss_pred EEEecCCCCEeeeCCCCCcHHHHHHHHhHC
Confidence 45799999888765 47777776 44
No 75
>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]
Probab=41.90 E-value=13 Score=26.74 Aligned_cols=29 Identities=21% Similarity=0.453 Sum_probs=23.0
Q ss_pred hcCCCCceeccCCCCCcccCChhHHHHHHHH
Q psy16882 64 IHTGDRPYVCPFDGCNKKFAQSTNLKSHILT 94 (318)
Q Consensus 64 ~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~ 94 (318)
.-.||-.+.||- |+..|.....+.+|...
T Consensus 11 ~RDGE~~lrCPR--C~~~FR~~K~Y~RHVNK 39 (65)
T COG4049 11 DRDGEEFLRCPR--CGMVFRRRKDYIRHVNK 39 (65)
T ss_pred ccCCceeeeCCc--hhHHHHHhHHHHHHhhH
Confidence 345777889965 99999999999999743
No 76
>TIGR00622 ssl1 transcription factor ssl1. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=39.72 E-value=49 Score=27.09 Aligned_cols=80 Identities=23% Similarity=0.314 Sum_probs=43.6
Q ss_pred CcccCCccCcccccchhhhhhhhhhcCCCce------------ecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCC
Q psy16882 11 RVHVCAECGKAFVESSKLKRHQLVHTGEKPF------------QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGC 78 (318)
Q Consensus 11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy------------~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C 78 (318)
-|-.|+.|+.+......|.+...---..++| .|-- |...|........- .-.....|.|+. |
T Consensus 14 LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~--C~~~f~~~~~~~~~--~~~~~~~y~C~~--C 87 (112)
T TIGR00622 14 LPVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFG--CQGPFPKPPVSPFD--ELKDSHRYVCAV--C 87 (112)
T ss_pred CCCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccC--cCCCCCCccccccc--ccccccceeCCC--C
Confidence 4677888888887777776542210111111 2543 77777654211100 011234578854 8
Q ss_pred CcccCChhHHHHHHHHhc
Q psy16882 79 NKKFAQSTNLKSHILTHA 96 (318)
Q Consensus 79 ~k~F~~~~~L~~H~r~H~ 96 (318)
...|--.-+.-.|...|.
T Consensus 88 ~~~FC~dCD~fiHe~Lh~ 105 (112)
T TIGR00622 88 KNVFCVDCDVFVHESLHC 105 (112)
T ss_pred CCccccccchhhhhhccC
Confidence 888877767667766654
No 77
>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=38.52 E-value=49 Score=32.38 Aligned_cols=21 Identities=29% Similarity=0.648 Sum_probs=11.5
Q ss_pred eccCCCCCcccCChhHHHHHHHH
Q psy16882 72 VCPFDGCNKKFAQSTNLKSHILT 94 (318)
Q Consensus 72 ~C~~~~C~k~F~~~~~L~~H~r~ 94 (318)
.|.+ |...|..-+.|..|.+.
T Consensus 222 ~C~F--C~~~FYdDDEL~~HcR~ 242 (493)
T COG5236 222 LCIF--CKIYFYDDDELRRHCRL 242 (493)
T ss_pred hhhh--ccceecChHHHHHHHHh
Confidence 3544 55555555555555544
No 78
>KOG2785|consensus
Probab=37.88 E-value=21 Score=35.14 Aligned_cols=75 Identities=17% Similarity=0.297 Sum_probs=48.9
Q ss_pred CcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCC---cccCChhH
Q psy16882 11 RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCN---KKFAQSTN 87 (318)
Q Consensus 11 k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~---k~F~~~~~ 87 (318)
.|-.|-.|++.|.+...-..||..+++- |.-. = .-......|..-+..-. ..-|.|-+ |+ +.|.+...
T Consensus 165 ~Pt~CLfC~~~~k~~e~~~~HM~~~Hgf--fIPd---r-eYL~D~~GLl~YLgeKV-~~~~~CL~--CN~~~~~f~slea 235 (390)
T KOG2785|consen 165 IPTDCLFCDKKSKSLEENLKHMFKEHGF--FIPD---R-EYLTDEKGLLKYLGEKV-GIGFICLF--CNELGRPFSSLEA 235 (390)
T ss_pred CCcceeecCCCcccHHHHHHHHhhccCC--cCCc---h-HhhhchhHHHHHHHHHh-ccCceEEE--eccccCcccccHH
Confidence 3567999999999999999999877653 1111 0 01122333333332211 23488977 98 99999999
Q ss_pred HHHHHHH
Q psy16882 88 LKSHILT 94 (318)
Q Consensus 88 L~~H~r~ 94 (318)
.+.||..
T Consensus 236 vr~HM~~ 242 (390)
T KOG2785|consen 236 VRAHMRD 242 (390)
T ss_pred HHHHHhh
Confidence 9999854
No 79
>KOG4124|consensus
Probab=36.60 E-value=8.4 Score=37.54 Aligned_cols=25 Identities=28% Similarity=0.674 Sum_probs=17.6
Q ss_pred CceecccCCCCCcccchhhhhhhhh
Q psy16882 39 KPFQCTFEGCGKRFSLDFNLRTHVR 63 (318)
Q Consensus 39 kpy~C~~~~Cgk~F~~~~~L~~H~r 63 (318)
++|+|.++.|.+.+.....|+.|..
T Consensus 348 ~~~~~~vp~~~~~~~n~ng~~~~~~ 372 (442)
T KOG4124|consen 348 KPYKCPVPNCDKAYKNQNGLKYHKL 372 (442)
T ss_pred CCCCCCCCcchhhcccCcceeeccc
Confidence 5677777777777777777766643
No 80
>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.
Probab=35.50 E-value=31 Score=20.57 Aligned_cols=21 Identities=24% Similarity=0.613 Sum_probs=15.4
Q ss_pred eeccCCCCCcccCChhHHHHHHHH
Q psy16882 71 YVCPFDGCNKKFAQSTNLKSHILT 94 (318)
Q Consensus 71 f~C~~~~C~k~F~~~~~L~~H~r~ 94 (318)
..||+ |++.+ ....++.|+..
T Consensus 2 v~CPi--C~~~v-~~~~in~HLD~ 22 (26)
T smart00734 2 VQCPV--CFREV-PENLINSHLDS 22 (26)
T ss_pred CcCCC--CcCcc-cHHHHHHHHHH
Confidence 46887 98887 55677888753
No 81
>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.
Probab=35.24 E-value=34 Score=22.45 Aligned_cols=25 Identities=32% Similarity=0.644 Sum_probs=14.2
Q ss_pred CCCceeccCCCCCcccCCh----hHHHHHHH
Q psy16882 67 GDRPYVCPFDGCNKKFAQS----TNLKSHIL 93 (318)
Q Consensus 67 gekpf~C~~~~C~k~F~~~----~~L~~H~r 93 (318)
+.....|.+ |++.+... +.|.+|++
T Consensus 13 ~~~~a~C~~--C~~~~~~~~~~ts~l~~HL~ 41 (45)
T PF02892_consen 13 DKKKAKCKY--CGKVIKYSSGGTSNLKRHLK 41 (45)
T ss_dssp CSS-EEETT--TTEE-----SSTHHHHHHHH
T ss_pred CcCeEEeCC--CCeEEeeCCCcHHHHHHhhh
Confidence 345677877 88777653 67888873
No 82
>PHA00649 hypothetical protein
Probab=35.04 E-value=21 Score=26.76 Aligned_cols=16 Identities=44% Similarity=0.808 Sum_probs=14.7
Q ss_pred CCCCCCCCchhhhhhh
Q psy16882 241 IPGIDLSDPKQLAEFA 256 (318)
Q Consensus 241 ~~~~~~~~~~~~~~~~ 256 (318)
|-|||+-||.|+.||-
T Consensus 25 ~LGVD~~~P~~VEEFr 40 (83)
T PHA00649 25 ILGVDVDVPEQVEEFR 40 (83)
T ss_pred HHcCCCCCHHHHHHHH
Confidence 5699999999999996
No 83
>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.
Probab=34.74 E-value=26 Score=22.28 Aligned_cols=11 Identities=45% Similarity=0.939 Sum_probs=6.3
Q ss_pred cccCCccCccc
Q psy16882 12 VHVCAECGKAF 22 (318)
Q Consensus 12 ~f~C~~Cgk~F 22 (318)
.|+|..||..+
T Consensus 2 ~~~C~~CG~i~ 12 (34)
T cd00729 2 VWVCPVCGYIH 12 (34)
T ss_pred eEECCCCCCEe
Confidence 35666666544
No 84
>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0.
Probab=34.27 E-value=21 Score=30.20 Aligned_cols=57 Identities=32% Similarity=0.642 Sum_probs=32.4
Q ss_pred CCCcccCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccc--hhhhhhhhhhcCCCCceeccCCCCCcccCChh
Q psy16882 9 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSL--DFNLRTHVRIHTGDRPYVCPFDGCNKKFAQST 86 (318)
Q Consensus 9 g~k~f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~--~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~ 86 (318)
..+.|+|++|..+...+.-|+ |=.| ||++--. -..|..|-.+| -.||+ |.-+|.+..
T Consensus 77 d~~lYeCnIC~etS~ee~FLK----------PneC----CgY~iCn~Cya~LWK~~~~y-----pvCPv--CkTSFKss~ 135 (140)
T PF05290_consen 77 DPKLYECNICKETSAEERFLK----------PNEC----CGYSICNACYANLWKFCNLY-----PVCPV--CKTSFKSSS 135 (140)
T ss_pred CCCceeccCcccccchhhcCC----------cccc----cchHHHHHHHHHHHHHcccC-----CCCCc--ccccccccc
Confidence 456788888887765444332 4444 5544322 24555555544 35776 877776553
No 85
>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain. This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.
Probab=33.73 E-value=34 Score=21.78 Aligned_cols=10 Identities=30% Similarity=0.926 Sum_probs=5.1
Q ss_pred cCCccCcccc
Q psy16882 14 VCAECGKAFV 23 (318)
Q Consensus 14 ~C~~Cgk~F~ 23 (318)
.|+.|+..|.
T Consensus 4 ~CP~C~~~~~ 13 (38)
T TIGR02098 4 QCPNCKTSFR 13 (38)
T ss_pred ECCCCCCEEE
Confidence 4555555544
No 86
>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.
Probab=33.62 E-value=33 Score=27.29 Aligned_cols=26 Identities=19% Similarity=0.452 Sum_probs=22.4
Q ss_pred ceec----cCCCCCcccCChhHHHHHHHHhcc
Q psy16882 70 PYVC----PFDGCNKKFAQSTNLKSHILTHAK 97 (318)
Q Consensus 70 pf~C----~~~~C~k~F~~~~~L~~H~r~H~~ 97 (318)
.|.| .. |+..+.+...+.+|.+.+|+
T Consensus 80 G~~C~~~~~~--C~y~~~~~~~m~~H~~~~Hg 109 (109)
T PF12013_consen 80 GYRCQCDPPH--CGYITRSKKTMRKHWRKEHG 109 (109)
T ss_pred CeeeecCCCC--CCcEeccHHHHHHHHHHhcC
Confidence 3899 65 99999999999999988764
No 87
>KOG3002|consensus
Probab=31.36 E-value=70 Score=30.66 Aligned_cols=61 Identities=13% Similarity=0.092 Sum_probs=28.5
Q ss_pred CceecccCCCCCcccchhhhhhhhhhcCCCCceeccC--CCCCcccCChhHHHHHHHHhcccccccccc
Q psy16882 39 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF--DGCNKKFAQSTNLKSHILTHAKAKLLKGLF 105 (318)
Q Consensus 39 kpy~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~--~~C~k~F~~~~~L~~H~r~H~~~k~~~c~~ 105 (318)
....|+. |...+.... .++|..-.....+.|++ .+|.++|..... ..|.+...- .++.|+.
T Consensus 79 ~~~~CP~--Cr~~~g~~R--~~amEkV~e~~~vpC~~~~~GC~~~~~Y~~~-~~HE~~C~f-~~~~CP~ 141 (299)
T KOG3002|consen 79 VSNKCPT--CRLPIGNIR--CRAMEKVAEAVLVPCKNAKLGCTKSFPYGEK-SKHEKVCEF-RPCSCPV 141 (299)
T ss_pred hcccCCc--cccccccHH--HHHHHHHHHhceecccccccCCceeeccccc-ccccccccc-CCcCCCC
Confidence 3455655 655555332 22332223334455553 356666655544 445444433 4444443
No 88
>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family. This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.
Probab=30.89 E-value=23 Score=24.22 Aligned_cols=11 Identities=36% Similarity=0.942 Sum_probs=6.4
Q ss_pred ccCCccCcccc
Q psy16882 13 HVCAECGKAFV 23 (318)
Q Consensus 13 f~C~~Cgk~F~ 23 (318)
|.|..|+..|.
T Consensus 6 y~C~~Cg~~fe 16 (52)
T TIGR02605 6 YRCTACGHRFE 16 (52)
T ss_pred EEeCCCCCEeE
Confidence 55666665554
No 89
>PF13719 zinc_ribbon_5: zinc-ribbon domain
Probab=30.61 E-value=43 Score=21.54 Aligned_cols=10 Identities=30% Similarity=0.923 Sum_probs=4.5
Q ss_pred cCCccCcccc
Q psy16882 14 VCAECGKAFV 23 (318)
Q Consensus 14 ~C~~Cgk~F~ 23 (318)
.|+.|+..|.
T Consensus 4 ~CP~C~~~f~ 13 (37)
T PF13719_consen 4 TCPNCQTRFR 13 (37)
T ss_pred ECCCCCceEE
Confidence 3444444443
No 90
>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function.
Probab=29.84 E-value=30 Score=31.35 Aligned_cols=44 Identities=30% Similarity=0.721 Sum_probs=29.4
Q ss_pred CCceecccCCCCCcccchhhhhhhhhh---cC-------CCCc-----eeccCCCCCcccCCh
Q psy16882 38 EKPFQCTFEGCGKRFSLDFNLRTHVRI---HT-------GDRP-----YVCPFDGCNKKFAQS 85 (318)
Q Consensus 38 ~kpy~C~~~~Cgk~F~~~~~L~~H~r~---H~-------gekp-----f~C~~~~C~k~F~~~ 85 (318)
.+.+.|++ |++.|..+.-+....+. .+ +..| ..||. ||.+|...
T Consensus 3 ~k~~~CPv--C~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~--CgyA~~~~ 61 (214)
T PF09986_consen 3 DKKITCPV--CGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPH--CGYAAFEE 61 (214)
T ss_pred CCceECCC--CCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCC--CCCccccc
Confidence 35678988 99999988777666653 11 1122 57965 99887644
No 91
>KOG4167|consensus
Probab=29.74 E-value=12 Score=39.89 Aligned_cols=25 Identities=32% Similarity=0.674 Sum_probs=16.1
Q ss_pred cccCCccCcccccchhhhhhhhhhc
Q psy16882 12 VHVCAECGKAFVESSKLKRHQLVHT 36 (318)
Q Consensus 12 ~f~C~~Cgk~F~~~~~L~~H~~~H~ 36 (318)
.|.|..|++.|....++..||++|.
T Consensus 792 iFpCreC~kvF~KiKSrNAHMK~Hr 816 (907)
T KOG4167|consen 792 IFPCRECGKVFFKIKSRNAHMKTHR 816 (907)
T ss_pred eeehHHHHHHHHHHhhhhHHHHHHH
Confidence 4666666666666666666666663
No 92
>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300. Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Probab=29.21 E-value=39 Score=28.30 Aligned_cols=30 Identities=30% Similarity=0.597 Sum_probs=21.1
Q ss_pred eecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCCh
Q psy16882 41 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQS 85 (318)
Q Consensus 41 y~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~ 85 (318)
..|+. ||+.|.. | +..|..|+. ||..|...
T Consensus 10 r~Cp~--cg~kFYD---L--------nk~p~vcP~--cg~~~~~~ 39 (129)
T TIGR02300 10 RICPN--TGSKFYD---L--------NRRPAVSPY--TGEQFPPE 39 (129)
T ss_pred ccCCC--cCccccc---c--------CCCCccCCC--cCCccCcc
Confidence 46876 8888864 2 235788976 99887655
No 93
>KOG2785|consensus
Probab=29.15 E-value=51 Score=32.56 Aligned_cols=25 Identities=24% Similarity=0.496 Sum_probs=20.6
Q ss_pred CCCcccCCccCcccccchhhhhhhh
Q psy16882 9 GPRVHVCAECGKAFVESSKLKRHQL 33 (318)
Q Consensus 9 g~k~f~C~~Cgk~F~~~~~L~~H~~ 33 (318)
.+.++.|.+|.+.|.+......|+.
T Consensus 65 ~~~~~~c~~c~k~~~s~~a~~~hl~ 89 (390)
T KOG2785|consen 65 AESVVYCEACNKSFASPKAHENHLK 89 (390)
T ss_pred cccceehHHhhccccChhhHHHHHH
Confidence 4567889999999998888888865
No 94
>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional
Probab=28.75 E-value=35 Score=22.88 Aligned_cols=12 Identities=33% Similarity=0.764 Sum_probs=6.5
Q ss_pred cccCCccCcccc
Q psy16882 12 VHVCAECGKAFV 23 (318)
Q Consensus 12 ~f~C~~Cgk~F~ 23 (318)
.|.|+.||..|.
T Consensus 3 ~y~C~~CG~~~~ 14 (46)
T PRK00398 3 EYKCARCGREVE 14 (46)
T ss_pred EEECCCCCCEEE
Confidence 355666665553
No 95
>PF14353 CpXC: CpXC protein
Probab=27.88 E-value=12 Score=30.84 Aligned_cols=49 Identities=27% Similarity=0.552 Sum_probs=27.6
Q ss_pred ccCCccCcccccchhhhhhhh--------hhcCC-CceecccCCCCCcccchhhhhhhhh
Q psy16882 13 HVCAECGKAFVESSKLKRHQL--------VHTGE-KPFQCTFEGCGKRFSLDFNLRTHVR 63 (318)
Q Consensus 13 f~C~~Cgk~F~~~~~L~~H~~--------~H~~~-kpy~C~~~~Cgk~F~~~~~L~~H~r 63 (318)
..|+.|+..|...-...-... +-.|. -.|.|+. ||..|.-...+..|-.
T Consensus 2 itCP~C~~~~~~~v~~~I~~~~~p~l~e~il~g~l~~~~CP~--Cg~~~~~~~p~lY~D~ 59 (128)
T PF14353_consen 2 ITCPHCGHEFEFEVWTSINADEDPELKEKILDGSLFSFTCPS--CGHKFRLEYPLLYHDP 59 (128)
T ss_pred cCCCCCCCeeEEEEEeEEcCcCCHHHHHHHHcCCcCEEECCC--CCCceecCCCEEEEcC
Confidence 368889988865432211111 11111 2377876 8888877777666544
No 96
>smart00834 CxxC_CXXC_SSSS Putative regulatory protein. CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.
Probab=27.62 E-value=30 Score=22.18 Aligned_cols=11 Identities=36% Similarity=1.041 Sum_probs=5.8
Q ss_pred ccCCccCcccc
Q psy16882 13 HVCAECGKAFV 23 (318)
Q Consensus 13 f~C~~Cgk~F~ 23 (318)
|.|..||..|.
T Consensus 6 y~C~~Cg~~fe 16 (41)
T smart00834 6 YRCEDCGHTFE 16 (41)
T ss_pred EEcCCCCCEEE
Confidence 45555555554
No 97
>smart00531 TFIIE Transcription initiation factor IIE.
Probab=27.18 E-value=36 Score=28.81 Aligned_cols=31 Identities=23% Similarity=0.590 Sum_probs=0.0
Q ss_pred ccCCccCcccccchhhhh-hhhhhcCCCceecccCCCCC
Q psy16882 13 HVCAECGKAFVESSKLKR-HQLVHTGEKPFQCTFEGCGK 50 (318)
Q Consensus 13 f~C~~Cgk~F~~~~~L~~-H~~~H~~~kpy~C~~~~Cgk 50 (318)
|.|+.|+..|.....+.. ++ .+. |.|+. ||.
T Consensus 100 Y~Cp~C~~~y~~~ea~~~~d~---~~~--f~Cp~--Cg~ 131 (147)
T smart00531 100 YKCPNCQSKYTFLEANQLLDM---DGT--FTCPR--CGE 131 (147)
T ss_pred EECcCCCCEeeHHHHHHhcCC---CCc--EECCC--CCC
No 98
>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.
Probab=26.81 E-value=35 Score=27.14 Aligned_cols=20 Identities=15% Similarity=0.338 Sum_probs=11.7
Q ss_pred CccCcccccchhhhhhhhhh
Q psy16882 16 AECGKAFVESSKLKRHQLVH 35 (318)
Q Consensus 16 ~~Cgk~F~~~~~L~~H~~~H 35 (318)
..|+..+.+...|.+|.+.+
T Consensus 88 ~~C~y~~~~~~~m~~H~~~~ 107 (109)
T PF12013_consen 88 PHCGYITRSKKTMRKHWRKE 107 (109)
T ss_pred CCCCcEeccHHHHHHHHHHh
Confidence 55666666666666665544
No 99
>PF04606 Ogr_Delta: Ogr/Delta-like zinc finger; InterPro: IPR007684 This entry is represented by Bacteriophage P2, Ogr. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This is a viral family of phage zinc-binding transcriptional activators, which also contains cryptic members in some bacterial genomes []. The P4 phage delta protein contains two such domains attached covalently, while the P2 phage Ogr proteins possess one domain but function as dimers. All the members of this family have the following consensus sequence: C-X(2)-C-X(3)-A-(X)2-R-X(15)-C-X(4)-C-X(3)-F [].; GO: 0006355 regulation of transcription, DNA-dependent
Probab=26.32 E-value=28 Score=23.64 Aligned_cols=41 Identities=29% Similarity=0.505 Sum_probs=23.7
Q ss_pred cCCccCcccccchhhhhhhhhhcCCCceecccCCCCCcccchh
Q psy16882 14 VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF 56 (318)
Q Consensus 14 ~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cgk~F~~~~ 56 (318)
.|+.||.......+...+.. ..+.-|+|...+||..|....
T Consensus 1 ~CP~Cg~~a~ir~S~~~s~~--~~~~Y~qC~N~~Cg~tfv~~~ 41 (47)
T PF04606_consen 1 RCPHCGSKARIRTSRQLSPL--TRELYCQCTNPECGHTFVANL 41 (47)
T ss_pred CcCCCCCeeEEEEchhhCcc--eEEEEEEECCCcCCCEEEEEE
Confidence 48888876554443332211 123447887777888886543
No 100
>COG1592 Rubrerythrin [Energy production and conversion]
Probab=26.19 E-value=46 Score=29.14 Aligned_cols=24 Identities=42% Similarity=1.142 Sum_probs=17.4
Q ss_pred ceecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCc
Q psy16882 40 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK 80 (318)
Q Consensus 40 py~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k 80 (318)
-|.|++ ||.. |.|+.|..||+ ||-
T Consensus 134 ~~vC~v--CGy~-------------~~ge~P~~CPi--Cga 157 (166)
T COG1592 134 VWVCPV--CGYT-------------HEGEAPEVCPI--CGA 157 (166)
T ss_pred EEEcCC--CCCc-------------ccCCCCCcCCC--CCC
Confidence 588887 8765 34577888877 873
No 101
>TIGR00373 conserved hypothetical protein TIGR00373. This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.
Probab=24.96 E-value=34 Score=29.44 Aligned_cols=26 Identities=23% Similarity=0.625 Sum_probs=0.0
Q ss_pred ccCCccCcccccchhhhhhhhhhcCCCceecccCCCC
Q psy16882 13 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 49 (318)
Q Consensus 13 f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cg 49 (318)
|.|+.|+..|+....+.. -|.|+. ||
T Consensus 110 Y~Cp~c~~r~tf~eA~~~---------~F~Cp~--Cg 135 (158)
T TIGR00373 110 FICPNMCVRFTFNEAMEL---------NFTCPR--CG 135 (158)
T ss_pred EECCCCCcEeeHHHHHHc---------CCcCCC--CC
No 102
>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins. The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.
Probab=24.58 E-value=33 Score=28.93 Aligned_cols=26 Identities=50% Similarity=0.911 Sum_probs=14.3
Q ss_pred cccCCccCcccccchhhhhhhhhhcCCCc
Q psy16882 12 VHVCAECGKAFVESSKLKRHQLVHTGEKP 40 (318)
Q Consensus 12 ~f~C~~Cgk~F~~~~~L~~H~~~H~~~kp 40 (318)
-..|-+||+.|.. |++|.+.|+|-.|
T Consensus 72 ~i~clecGk~~k~---LkrHL~~~~gltp 97 (132)
T PF05443_consen 72 YIICLECGKKFKT---LKRHLRTHHGLTP 97 (132)
T ss_dssp -EE-TBT--EESB---HHHHHHHTT-S-H
T ss_pred eeEEccCCcccch---HHHHHHHccCCCH
Confidence 4568888888864 5788888866543
No 103
>PF13717 zinc_ribbon_4: zinc-ribbon domain
Probab=24.53 E-value=68 Score=20.56 Aligned_cols=10 Identities=20% Similarity=0.853 Sum_probs=4.8
Q ss_pred cCCccCcccc
Q psy16882 14 VCAECGKAFV 23 (318)
Q Consensus 14 ~C~~Cgk~F~ 23 (318)
.|+.|+..|.
T Consensus 4 ~Cp~C~~~y~ 13 (36)
T PF13717_consen 4 TCPNCQAKYE 13 (36)
T ss_pred ECCCCCCEEe
Confidence 3444554444
No 104
>KOG4377|consensus
Probab=24.49 E-value=54 Score=32.79 Aligned_cols=25 Identities=24% Similarity=0.453 Sum_probs=12.9
Q ss_pred eccCCCCCcccCChhHHHHHHHHhc
Q psy16882 72 VCPFDGCNKKFAQSTNLKSHILTHA 96 (318)
Q Consensus 72 ~C~~~~C~k~F~~~~~L~~H~r~H~ 96 (318)
-|...+|+.+|...+++..|.+.|.
T Consensus 403 hc~r~Gc~~tl~s~sqm~shkrkhe 427 (480)
T KOG4377|consen 403 HCDRLGCEATLYSVSQMASHKRKHE 427 (480)
T ss_pred eecccCCceEEEehhhhhhhhhhhh
Confidence 3444455555555555555555443
No 105
>smart00659 RPOLCX RNA polymerase subunit CX. present in RNA polymerase I, II and III
Probab=24.15 E-value=61 Score=21.90 Aligned_cols=12 Identities=33% Similarity=0.982 Sum_probs=8.0
Q ss_pred cccCCccCcccc
Q psy16882 12 VHVCAECGKAFV 23 (318)
Q Consensus 12 ~f~C~~Cgk~F~ 23 (318)
.|.|..||..|.
T Consensus 2 ~Y~C~~Cg~~~~ 13 (44)
T smart00659 2 IYICGECGRENE 13 (44)
T ss_pred EEECCCCCCEee
Confidence 366777777665
No 106
>PRK06266 transcription initiation factor E subunit alpha; Validated
Probab=23.56 E-value=37 Score=29.95 Aligned_cols=26 Identities=27% Similarity=0.765 Sum_probs=0.0
Q ss_pred ccCCccCcccccchhhhhhhhhhcCCCceecccCCCC
Q psy16882 13 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 49 (318)
Q Consensus 13 f~C~~Cgk~F~~~~~L~~H~~~H~~~kpy~C~~~~Cg 49 (318)
|.|+.|+..|+....+.. -|.|+. ||
T Consensus 118 Y~Cp~C~~rytf~eA~~~---------~F~Cp~--Cg 143 (178)
T PRK06266 118 FFCPNCHIRFTFDEAMEY---------GFRCPQ--CG 143 (178)
T ss_pred EECCCCCcEEeHHHHhhc---------CCcCCC--CC
No 107
>PF07759 DUF1615: Protein of unknown function (DUF1615); InterPro: IPR011673 This is a family of proteins of unknown function expressed by various bacterial species. Some members of this family (e.g. Q8Z8Z7 from SWISSPROT, Q8ZRF4 from SWISSPROT) are thought to be lipoproteins. Another member of this family (Q93SV8 from SWISSPROT) is thought to be involved in photosynthesis [].
Probab=23.00 E-value=37 Score=32.56 Aligned_cols=32 Identities=28% Similarity=0.530 Sum_probs=24.8
Q ss_pred CccCCchhhhh-----hccccccCCCCCCCCCCCCch
Q psy16882 219 EFEQEHEYEDC-----ILTEQEIKHEPIPGIDLSDPK 250 (318)
Q Consensus 219 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 250 (318)
+||.-+.|.-- -.+|+.+|-+-+|||.|+.||
T Consensus 259 ~Fe~T~lY~~v~~La~~~~Gk~~pra~LP~I~L~SPK 295 (319)
T PF07759_consen 259 DFEDTDLYKRVFALADKKAGKPLPRAILPGIVLESPK 295 (319)
T ss_pred cccccHHHHHHHHHHHHHcCCCCCHhhcCCCcccCCc
Confidence 56666665421 147999999999999999999
No 108
>KOG2186|consensus
Probab=22.11 E-value=54 Score=30.69 Aligned_cols=51 Identities=24% Similarity=0.548 Sum_probs=38.9
Q ss_pred eecccCCCCCcccchhhhhhhhhhcCCCCceeccCCCCCcccCChhHHHHHHHHhccc
Q psy16882 41 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA 98 (318)
Q Consensus 41 y~C~~~~Cgk~F~~~~~L~~H~r~H~gekpf~C~~~~C~k~F~~~~~L~~H~r~H~~~ 98 (318)
|.|.. ||.+.. +..+.+|+..-++ .-|.| .+|++.|.+ ..+..|..--+..
T Consensus 4 FtCnv--CgEsvK-Kp~vekH~srCrn-~~fSC--IDC~k~F~~-~sYknH~kCITEa 54 (276)
T KOG2186|consen 4 FTCNV--CGESVK-KPQVEKHMSRCRN-AYFSC--IDCGKTFER-VSYKNHTKCITEA 54 (276)
T ss_pred Eehhh--hhhhcc-ccchHHHHHhccC-CeeEE--eeccccccc-chhhhhhhhcchH
Confidence 78887 998765 4467779887666 67999 679999998 7788887644433
No 109
>COG0238 RpsR Ribosomal protein S18 [Translation, ribosomal structure and biogenesis]
Probab=21.88 E-value=67 Score=24.41 Aligned_cols=38 Identities=37% Similarity=0.403 Sum_probs=26.8
Q ss_pred cCCCCCCCCCCCCchhhhhhhhccCCCCCCccchhhhhcccccc
Q psy16882 236 IKHEPIPGIDLSDPKQLAEFASVNNYRPGNNKIKVKRQVGLSAA 279 (318)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (318)
+...+|+-||--|+.-|..|-+- .-||.+.+-.|+||-
T Consensus 20 ~~~~~~~~iDYKd~~~L~rfise------~GKI~prRiTG~sak 57 (75)
T COG0238 20 FTAEGIEEIDYKDVELLKRFISE------RGKILPRRITGTSAK 57 (75)
T ss_pred cccccCCccCccCHHHHHHHhcc------cCcccccccccccHH
Confidence 44566899999999999999732 245666666565553
Done!