BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16887
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q95168|ZO2_CANFA Tight junction protein ZO-2 OS=Canis familiaris GN=TJP2 PE=1 SV=1
Length = 1174
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 4 DDVVFGDSIS-KFPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSAP--HPR 60
+D+ S+S KFPAYERV LR GF RPVVLFGP+AD+A +KL + PD F P+
Sbjct: 688 EDLTAAVSVSTKFPAYERVLLREAGFKRPVVLFGPIADIALEKLANELPDLFQTAKTEPK 747
Query: 61 RRNQEKFRWSSFFNSLTKV 79
EK N++ ++
Sbjct: 748 DAGSEKSSGVVRLNTVRQI 766
>sp|O97758|ZO1_CANFA Tight junction protein ZO-1 OS=Canis familiaris GN=TJP1 PE=1 SV=1
Length = 1769
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 35/42 (83%)
Query: 13 SKFPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKF 54
+KFPAYERV LR GF+RPV +FGP+AD+AR+KL ++ PD +
Sbjct: 627 TKFPAYERVVLREAGFLRPVTIFGPIADVAREKLAREEPDIY 668
>sp|Q07157|ZO1_HUMAN Tight junction protein ZO-1 OS=Homo sapiens GN=TJP1 PE=1 SV=3
Length = 1748
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 35/42 (83%)
Query: 13 SKFPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKF 54
+KFPAYERV LR GF+RPV +FGP+AD+AR+KL ++ PD +
Sbjct: 628 TKFPAYERVVLREAGFLRPVTIFGPIADVAREKLAREEPDIY 669
>sp|P39447|ZO1_MOUSE Tight junction protein ZO-1 OS=Mus musculus GN=Tjp1 PE=1 SV=2
Length = 1745
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 35/42 (83%)
Query: 13 SKFPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKF 54
+KFPAYERV LR GF+RPV +FGP+AD+AR+KL ++ PD +
Sbjct: 628 TKFPAYERVVLREAGFLRPVTIFGPIADVAREKLAREEPDIY 669
>sp|Q9UDY2|ZO2_HUMAN Tight junction protein ZO-2 OS=Homo sapiens GN=TJP2 PE=1 SV=2
Length = 1190
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 13 SKFPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSAP--HPRRRNQEKFRWS 70
+KFPAYERV LR GF RPVVLFGP+AD+A +KL + PD F P+ EK
Sbjct: 714 TKFPAYERVLLREAGFKRPVVLFGPIADIAMEKLANELPDWFQTAKTEPKDAGSEKSTGV 773
Query: 71 SFFNSLTKV 79
N++ ++
Sbjct: 774 VRLNTVRQI 782
>sp|Q9Z0U1|ZO2_MOUSE Tight junction protein ZO-2 OS=Mus musculus GN=Tjp2 PE=1 SV=2
Length = 1167
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 13 SKFPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKF--SAPHPRRRNQEK 66
+KFPAYE+V LR GF RPVVLFGP+AD+A ++L + PD F + P+ EK
Sbjct: 696 TKFPAYEKVLLREAGFKRPVVLFGPIADIAMERLATELPDLFQTAKTEPKDAGSEK 751
>sp|O95049|ZO3_HUMAN Tight junction protein ZO-3 OS=Homo sapiens GN=TJP3 PE=1 SV=2
Length = 933
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 14 KFPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKF 54
++P YERV LR F RPVV+ GPVAD+A KL + PD+F
Sbjct: 617 RYPPYERVVLREASFKRPVVILGPVADIAMQKLTAEMPDQF 657
>sp|O62683|ZO3_CANFA Tight junction protein ZO-3 OS=Canis familiaris GN=TJP3 PE=1 SV=1
Length = 898
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 28/40 (70%)
Query: 15 FPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKF 54
+P YERV LR F RPVV+ GPVAD+A KL + PD+F
Sbjct: 593 YPPYERVVLREASFKRPVVILGPVADIAMQKLTAEMPDQF 632
>sp|Q9QXY1|ZO3_MOUSE Tight junction protein ZO-3 OS=Mus musculus GN=Tjp3 PE=1 SV=1
Length = 905
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 15 FPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSAPHPRRR 62
+P YERV LR F RPVV+ GPVAD+A KL + P++F R
Sbjct: 597 YPPYERVVLREASFKRPVVILGPVADIAMKKLTTEMPEEFEIAESMSR 644
>sp|P78352|DLG4_HUMAN Disks large homolog 4 OS=Homo sapiens GN=DLG4 PE=1 SV=3
Length = 724
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PH---PRRRNQEKFRWSS 71
+YE V+ + RP+++ GP D A D LL +FPDKF + PH P+R + R
Sbjct: 522 SYETVTQMEVHYARPIIILGPTKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYH 581
Query: 72 FFNSLTK----VSATCLTSYGFYVDLLFGSN 98
F +S K + A G Y L+G++
Sbjct: 582 FVSSREKMEKDIQAHKFIEAGQYNSHLYGTS 612
>sp|P31016|DLG4_RAT Disks large homolog 4 OS=Rattus norvegicus GN=Dlg4 PE=1 SV=1
Length = 724
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PH---PRRRNQEKFRWSS 71
+YE V+ + RP+++ GP D A D LL +FPDKF + PH P+R + R
Sbjct: 522 SYETVTQMEVHYARPIIILGPTKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYH 581
Query: 72 FFNSLTK----VSATCLTSYGFYVDLLFGSN 98
F +S K + A G Y L+G++
Sbjct: 582 FVSSREKMEKDIQAHKFIEAGQYNSHLYGTS 612
>sp|Q62108|DLG4_MOUSE Disks large homolog 4 OS=Mus musculus GN=Dlg4 PE=1 SV=1
Length = 724
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PH---PRRRNQEKFRWSS 71
+YE V+ + RP+++ GP D A D LL +FPDKF + PH P+R + R
Sbjct: 522 SYETVTQMEVHYARPIIILGPTKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYH 581
Query: 72 FFNSLTK----VSATCLTSYGFYVDLLFGSN 98
F +S K + A G Y L+G++
Sbjct: 582 FVSSREKMEKDIQAHKFIEAGQYNSHLYGTS 612
>sp|Q6R005|DLG4_DANRE Disks large homolog 4 OS=Danio rerio GN=dlg4 PE=2 SV=1
Length = 801
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PHPRRRNQE 65
+YE V+ + RPV++ GP D D LL +FPDKF + PH R +E
Sbjct: 598 SYETVTQSEVHYARPVIILGPSKDRVNDDLLSEFPDKFGSCVPHTTRPKRE 648
>sp|Q5PYH6|DLG1_DANRE Disks large homolog 1 OS=Danio rerio GN=dlg1 PE=2 SV=2
Length = 873
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PH---PRRRNQEKFRWSS 71
+YE V+ + + RPV++ GP+ D D L+ +FPDKF + PH P+R + R
Sbjct: 671 SYETVTQQEVSYSRPVIILGPMKDRINDDLISEFPDKFGSCVPHTTRPKRDYEVDGRDYH 730
Query: 72 FFNS 75
F NS
Sbjct: 731 FVNS 734
>sp|Q5PYH5|DLG1L_DANRE Discs large homolog 1-like protein OS=Danio rerio GN=dlg1l PE=2
SV=1
Length = 827
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PHPRRRNQE 65
+YE VS + + RPV++ GP+ D D L+ +FPDKF + PH R ++
Sbjct: 625 SYEPVSQQEVNYSRPVIILGPMKDRVNDDLISEFPDKFGSCVPHTTRPKRD 675
>sp|Q811D0|DLG1_MOUSE Disks large homolog 1 OS=Mus musculus GN=Dlg1 PE=1 SV=1
Length = 905
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PHPRRRNQE 65
+YE V+ + + RPV++ GP+ D D L+ +FPDKF + PH R ++
Sbjct: 703 SYEPVNQQEVNYTRPVIILGPMKDRVNDDLISEFPDKFGSCVPHTTRPKRD 753
>sp|Q62696|DLG1_RAT Disks large homolog 1 OS=Rattus norvegicus GN=Dlg1 PE=1 SV=1
Length = 911
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PHPRRRNQE 65
+YE V+ + + RPV++ GP+ D D L+ +FPDKF + PH R ++
Sbjct: 709 SYEPVNQQEVNYTRPVIILGPMKDRVNDDLISEFPDKFGSCVPHTTRPKRD 759
>sp|Q63622|DLG2_RAT Disks large homolog 2 OS=Rattus norvegicus GN=Dlg2 PE=1 SV=1
Length = 852
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PHPRRRNQE 65
+YE V+ + + RPV++ GP+ D D L+ +FPDKF + PH R ++
Sbjct: 650 SYEPVTRQEINYTRPVIILGPMKDRINDDLISEFPDKFGSCVPHTTRPKRD 700
>sp|Q91XM9|DLG2_MOUSE Disks large homolog 2 OS=Mus musculus GN=Dlg2 PE=1 SV=2
Length = 852
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PHPRRRNQE 65
+YE V+ + + RPV++ GP+ D D L+ +FPDKF + PH R ++
Sbjct: 650 SYEPVTRQEINYTRPVIILGPMKDRINDDLISEFPDKFGSCVPHTTRPKRD 700
>sp|Q12959|DLG1_HUMAN Disks large homolog 1 OS=Homo sapiens GN=DLG1 PE=1 SV=2
Length = 904
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PHPRRRNQE 65
+YE V+ + + RPV++ GP+ D D L+ +FPDKF + PH R ++
Sbjct: 702 SYEPVNQQEVNYTRPVIILGPMKDRINDDLISEFPDKFGSCVPHTTRPKRD 752
>sp|Q15700|DLG2_HUMAN Disks large homolog 2 OS=Homo sapiens GN=DLG2 PE=1 SV=3
Length = 870
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PHPRRRNQE 65
+YE V+ + + RPV++ GP+ D D L+ +FPDKF + PH R ++
Sbjct: 668 SYEPVTRQEINYTRPVIILGPMKDRINDDLISEFPDKFGSCVPHTTRPKRD 718
>sp|Q92796|DLG3_HUMAN Disks large homolog 3 OS=Homo sapiens GN=DLG3 PE=1 SV=2
Length = 817
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PH---PRRRNQ 64
+YE V+ + + RPV++ GP+ D D L+ +FP KF + PH PRR N+
Sbjct: 615 SYEPVTRQEIHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNE 667
>sp|P70175|DLG3_MOUSE Disks large homolog 3 OS=Mus musculus GN=Dlg3 PE=1 SV=1
Length = 849
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PH---PRRRNQ 64
+YE V+ + + RPV++ GP+ D D L+ +FP KF + PH PRR N+
Sbjct: 647 SYEPVTRQEIHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNE 699
>sp|Q62936|DLG3_RAT Disks large homolog 3 OS=Rattus norvegicus GN=Dlg3 PE=1 SV=1
Length = 849
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PH---PRRRNQ 64
+YE V+ + + RPV++ GP+ D D L+ +FP KF + PH PRR N+
Sbjct: 647 SYEPVTRQEIHYARPVIILGPMKDRVNDDLISEFPHKFGSCVPHTTRPRRDNE 699
>sp|P31007|DLG1_DROME Disks large 1 tumor suppressor protein OS=Drosophila melanogaster
GN=dlg1 PE=1 SV=2
Length = 970
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 9 GDSISKFPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PHPRRRNQE 65
G S +YE V + RPV++ GP+ D D L+ ++PDKF + PH R +E
Sbjct: 760 GASEENVLSYEAVQRLSINYTRPVIILGPLKDRINDDLISEYPDKFGSCVPHTTRPKRE 818
>sp|Q28C55|DLG1_XENTR Disks large homolog 1 OS=Xenopus tropicalis GN=dlg1 PE=2 SV=1
Length = 927
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSA--PHPRRRNQE 65
+YE V+ + + RPV++ GP D D L+ +FP+KF + PH R ++
Sbjct: 725 SYEPVNQQEVNYSRPVIILGPTKDRVNDDLISEFPEKFGSCVPHTTRPKRD 775
>sp|Q5PYH7|DLG2_DANRE Disks large homolog 2 OS=Danio rerio GN=dlg2 PE=2 SV=1
Length = 881
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 17 AYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSAPHP 59
+YE V + + RPV++ GP+ D D L+ +FPDKF + P
Sbjct: 671 SYEPVIRQEINYARPVIILGPMKDRINDDLISEFPDKFGSCVP 713
>sp|Q8TDM6|DLG5_HUMAN Disks large homolog 5 OS=Homo sapiens GN=DLG5 PE=1 SV=4
Length = 1919
Score = 35.4 bits (80), Expect = 0.14, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 7 VFGDSISKFPAYERVSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKF 54
+F DS+S AY+RV +RPV++ GP+ D+ ++ L+ + P KF
Sbjct: 1719 LFEDSVSL--AYQRVQKVDCTALRPVLILGPLLDVVKEMLVNEAPGKF 1764
>sp|Q24210|CSKP_DROME Peripheral plasma membrane protein CASK OS=Drosophila melanogaster
GN=CASK PE=1 SV=4
Length = 898
Score = 35.4 bits (80), Expect = 0.15, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 60/150 (40%), Gaps = 29/150 (19%)
Query: 5 DVVFGDSISKFPAYERVSLRHPGFIRPVVLFGPVADLAR----DKLLKDFPDKFSAP--- 57
DVV + + K P + P F R ++ + R + L+ +PDK++ P
Sbjct: 692 DVVTYEEVVKVPVGD------PNFQRKTLVLLGAHGVGRRHIKNTLISKYPDKYAYPIPH 745
Query: 58 -----HPRRRNQEKFRWSSFFNSLTKVSATCLTSYGFYVDLLFGSNRSDDLDSNPRVYTR 112
P N + + S + + A YG + D ++G+ LD+ R++T
Sbjct: 746 TTRPAKPEEENGRSYYFVSHDEMMADIGANEYLEYGTHEDAMYGTK----LDTIRRIHTE 801
Query: 113 PWKNGKPGKSMDLKIRPKVMENVKTLREKP 142
GK L + P+ ++ ++T P
Sbjct: 802 -------GKMAILDVEPQALKILRTAEFTP 824
>sp|P49697|EM55_TAKRU 55 kDa erythrocyte membrane protein OS=Takifugu rubripes GN=mpp1
PE=3 SV=1
Length = 467
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 20/104 (19%)
Query: 5 DVVFGDSISKFPAYER---VSLRHPGFIRPVVLFGPVADLARDKLLKDFPDKFSAP---- 57
DV+ + + + PA++R V + PG R + ++ LL +P+KFS P
Sbjct: 268 DVISYEEVVRLPAFKRKTLVLIGAPGVGRRHI---------KNVLLTKYPEKFSYPVPHT 318
Query: 58 -HPRRR---NQEKFRWSSFFNSLTKVSATCLTSYGFYVDLLFGS 97
P+R+ N E++ + S +SA L YG + +FG+
Sbjct: 319 TRPQRKGDANGEEYFFISNEAMTKCISANELLEYGSFQGYMFGT 362
>sp|Q17QN6|EM55_BOVIN 55 kDa erythrocyte membrane protein OS=Bos taurus GN=MPP1 PE=1 SV=1
Length = 466
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 31/149 (20%)
Query: 5 DVVFGDSISKFPAYERVSLRHPGFIRPVVLFGPVA---DLARDKLLKDFPDKFSAP---- 57
DVV + + + PA++R +L VL G + LL PDKF+ P
Sbjct: 267 DVVSYEEVVRLPAFKRKTL---------VLIGASGVGRSHIKSALLSQNPDKFAYPAPYT 317
Query: 58 -HPRRRNQEKFRWSSFFNS--LTK-VSATCLTSYGFYVDLLFGSNRSDDLDSNPRVYTRP 113
P R+++E + F ++ +T+ +SA +G Y +FG+ ++ +++
Sbjct: 318 TRPARKSEEDGKEYHFISTEEMTRSISANEFLEFGSYQGNMFGTK----FETVHQIH--- 370
Query: 114 WKNGKPGKSMDLKIRPKVMENVKTLREKP 142
K K L I P+ ++ V+T P
Sbjct: 371 ----KQDKVAILDIEPQTLKIVRTAELSP 395
>sp|Q9Z1N3|MYO9A_RAT Unconventional myosin-IXa OS=Rattus norvegicus GN=Myo9a PE=1 SV=1
Length = 2626
Score = 30.8 bits (68), Expect = 3.6, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 94 LFGSNRSDDLDSNP-RVYTRPWKNGKPGKSMDLKIRPKVMENVKTL 138
L G +S DLD P R R W GK G+ +++P V +L
Sbjct: 1809 LAGRQKSSDLDIRPQRAKMRFWAKGKQGEKKTTRVKPAPQSEVSSL 1854
>sp|O14108|ETA2_SCHPO DNA-binding protein eta2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=eta2 PE=1 SV=1
Length = 569
Score = 30.0 bits (66), Expect = 5.6, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 64 QEKFRWSSFFNSLTKVSATCLTSYGFYVDLLFGSNRSDDLDSNPRVYTRPWKNGKPGKSM 123
QE RW+S N L A C++ + F V G++ + +D + W N + K +
Sbjct: 344 QEGTRWNSIANKLGTSPAACMSQWRFVV----GTSTQETIDRR-----KLWTNEEEAKLL 394
Query: 124 DL 125
DL
Sbjct: 395 DL 396
>sp|P36737|VL1_HPV32 Major capsid protein L1 OS=Human papillomavirus type 32 GN=L1 PE=3
SV=1
Length = 503
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Query: 98 NRSDDLDSNPRVYTRPWKNGKPGKSMDLK--------IRPKVMENVKTLREKPGNSHGIC 149
NR DD ++ PR P + + SMD K +P + E+ S+G C
Sbjct: 123 NRLDDTENGPRYAAGPGTDNRENVSMDCKQTQLCLVGCKPAIGEHWGKGAACSAQSNGDC 182
Query: 150 HPVKLNN 156
P++L N
Sbjct: 183 PPLELQN 189
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,765,886
Number of Sequences: 539616
Number of extensions: 2698688
Number of successful extensions: 4955
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4926
Number of HSP's gapped (non-prelim): 34
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)