Your job contains 1 sequence.
>psy1689
RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC
PNACRGLSDSWGEKFDDLYKKYEAEGLVYFRPGAFAIYLEPWHGDIFDFLELKKNTGKEE
FRARDLFYGLWIPDEFMRRVESDAQWSLMCPNTCRGLSDSWGEKFDDLYKKYEAEGKFIR
QVPARKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVA
VCNLASIALNMYINPADKTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPI
GIGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPV
SQGILQYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYT
SNIYSRRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYK
TVWEIPQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRT
KPAANAIQFTIDKTKMANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCIGVQGLAD
LFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDM
WGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE
ELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFKYDMWGVTPTD
LWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVV
NHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAAD
RGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKM
ANAMASKDTRSQEEIQADQEQAMAAMICRRDNKEDCLK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1689
(998 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0011703 - symbol:RnrL "Ribonucleoside diphosphate ... 1960 1.5e-202 1
RGD|1592569 - symbol:Rrm1 "ribonucleotide reductase M1" s... 1958 2.4e-202 1
ZFIN|ZDB-GENE-990415-247 - symbol:rrm1 "ribonucleotide re... 1956 3.9e-202 1
MGI|MGI:98180 - symbol:Rrm1 "ribonucleotide reductase M1"... 1954 6.4e-202 1
UNIPROTKB|F1SUZ5 - symbol:F1SUZ5 "Uncharacterized protein... 1953 8.2e-202 1
UNIPROTKB|F1MSF1 - symbol:RRM1 "Ribonucleoside-diphosphat... 1952 1.0e-201 1
UNIPROTKB|P23921 - symbol:RRM1 "Ribonucleoside-diphosphat... 1949 2.2e-201 1
UNIPROTKB|E9PD78 - symbol:RRM1 "Ribonucleoside-diphosphat... 1949 2.2e-201 1
UNIPROTKB|E9PL69 - symbol:RRM1 "Ribonucleoside-diphosphat... 1949 2.2e-201 1
UNIPROTKB|Q5R919 - symbol:RRM1 "Ribonucleoside-diphosphat... 1943 9.4e-201 1
UNIPROTKB|E2R8P1 - symbol:RRM1 "Ribonucleoside-diphosphat... 1943 9.4e-201 1
WB|WBGene00004391 - symbol:rnr-1 species:6239 "Caenorhabd... 1870 5.1e-193 1
UNIPROTKB|Q03604 - symbol:rnr-1 "Ribonucleoside-diphospha... 1870 5.1e-193 1
UNIPROTKB|F5H861 - symbol:RRM1 "Ribonucleoside-diphosphat... 1734 1.3e-191 2
POMBASE|SPAC1F7.05 - symbol:cdc22 "ribonucleoside reducta... 1767 4.2e-182 1
UNIPROTKB|Q9UW15 - symbol:rnr-1 "Ribonucleoside-diphospha... 1766 5.4e-182 1
TAIR|locus:2052469 - symbol:RNR1 "ribonucleotide reductas... 1121 2.1e-178 2
ASPGD|ASPL0000074083 - symbol:AN4380 species:162425 "Emer... 1711 2.7e-178 2
UNIPROTKB|P50648 - symbol:RNR1 "Ribonucleoside-diphosphat... 1725 1.2e-177 1
UNIPROTKB|E1C4Q0 - symbol:E1C4Q0 "Ribonucleoside-diphosph... 1722 2.5e-177 1
UNIPROTKB|O61065 - symbol:RNR1 "Ribonucleoside-diphosphat... 1715 1.4e-176 1
SGD|S000000872 - symbol:RNR1 "Major isoform of large subu... 1682 4.3e-173 1
CGD|CAL0001524 - symbol:RNR1 species:5476 "Candida albica... 1676 1.8e-172 1
UNIPROTKB|Q5A0N3 - symbol:RNR1 "Ribonucleoside-diphosphat... 1676 1.8e-172 1
SGD|S000001328 - symbol:RNR3 "Minor isoform of the large ... 1665 2.7e-171 1
UNIPROTKB|P50647 - symbol:RNR1 "Ribonucleoside-diphosphat... 1626 3.7e-167 1
DICTYBASE|DDB_G0284071 - symbol:rnrA "ribonucleoside-diph... 1623 7.6e-167 1
UNIPROTKB|O15909 - symbol:RNR1 "Ribonucleoside-diphosphat... 1622 9.7e-167 1
CGD|CAL0002354 - symbol:RNR3 species:5476 "Candida albica... 1599 2.7e-164 1
UNIPROTKB|Q59M54 - symbol:RNR3 "Ribonucleoside-diphosphat... 1599 2.7e-164 1
UNIPROTKB|Q8SR37 - symbol:ECU10_0920 "Ribonucleoside-diph... 1550 4.1e-159 1
UNIPROTKB|Q607W9 - symbol:nrdA "Ribonucleoside-diphosphat... 907 3.4e-94 2
UNIPROTKB|Q886B0 - symbol:nrdA "Ribonucleoside-diphosphat... 918 5.4e-94 2
UNIPROTKB|Q48FF6 - symbol:nrdA "Ribonucleoside-diphosphat... 911 3.0e-93 2
TIGR_CMR|CBU_1553 - symbol:CBU_1553 "ribonucleoside-dipho... 907 5.7e-91 1
UNIPROTKB|Q5HXD4 - symbol:nrdA "Ribonucleoside-diphosphat... 349 3.5e-59 4
TIGR_CMR|CJE_0024 - symbol:CJE_0024 "ribonucleoside-dipho... 349 3.5e-59 4
TIGR_CMR|NSE_0411 - symbol:NSE_0411 "ribonucleoside-dipho... 280 2.8e-45 3
UNIPROTKB|Q71XL1 - symbol:nrdA "Ribonucleoside-diphosphat... 314 3.1e-39 3
TIGR_CMR|ECH_0459 - symbol:ECH_0459 "ribonucleoside-dipho... 243 5.4e-37 2
TIGR_CMR|APH_0331 - symbol:APH_0331 "ribonucleoside-dipho... 241 5.2e-36 2
TIGR_CMR|CPS_2328 - symbol:CPS_2328 "ribonucleoside-dipho... 378 1.5e-33 2
UNIPROTKB|P00452 - symbol:nrdA species:83333 "Escherichia... 369 1.5e-32 2
TIGR_CMR|SO_2415 - symbol:SO_2415 "ribonucleoside-diphosp... 362 1.5e-31 2
UNIPROTKB|Q9KSK0 - symbol:VC1256 "Ribonucleoside-diphosph... 359 2.8e-29 1
TIGR_CMR|VC_1256 - symbol:VC_1256 "ribonucleoside-diphosp... 359 2.8e-29 1
TIGR_CMR|BA_1371 - symbol:BA_1371 "ribonucleoside-diphosp... 259 1.3e-26 3
UNIPROTKB|P0A5W8 - symbol:nrdE "Ribonucleoside-diphosphat... 262 3.1e-23 2
UNIPROTKB|O53767 - symbol:nrdZ "Ribonucleoside-diphosphat... 214 8.3e-20 3
TIGR_CMR|DET_0623 - symbol:DET_0623 "ribonucleotide reduc... 220 8.9e-20 3
TIGR_CMR|CHY_0676 - symbol:CHY_0676 "ribonucleoside-dipho... 175 3.0e-18 4
UNIPROTKB|Q0C1X7 - symbol:HNE_1555 "Ribonucleoside-diphos... 245 3.9e-18 2
UNIPROTKB|P39452 - symbol:nrdE species:83333 "Escherichia... 246 4.8e-17 1
TIGR_CMR|DET_0345 - symbol:DET_0345 "ribonucleotide reduc... 204 1.8e-16 3
TIGR_CMR|SPO_3194 - symbol:SPO_3194 "ribonucleoside-dipho... 219 9.8e-15 2
TIGR_CMR|GSU_1871 - symbol:GSU_1871 "ribonucleoside-dipho... 208 1.1e-13 2
TIGR_CMR|DET_0244 - symbol:DET_0244 "ribonucleotide reduc... 144 8.4e-10 3
UNIPROTKB|Q5LRJ1 - symbol:nrdJ "Ribonucleoside-diphosphat... 142 3.3e-06 2
TIGR_CMR|SPO_2136 - symbol:SPO_2136 "ribonucleoside-dipho... 142 3.3e-06 2
>FB|FBgn0011703 [details] [associations]
symbol:RnrL "Ribonucleoside diphosphate reductase large
subunit" species:7227 "Drosophila melanogaster" [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS;NAS] [GO:0006260
"DNA replication" evidence=IEA;NAS] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0042246 "tissue regeneration" evidence=IMP] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524 EMBL:AE014134
GO:GO:0006260 GO:GO:0006919 GO:GO:0042246 GO:GO:0009263 KO:K10807
InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506
GeneTree:ENSGT00390000001372 OMA:YKYGVKT EMBL:AF132143
EMBL:AY119149 EMBL:U09369 RefSeq:NP_477027.1 UniGene:Dm.3216
ProteinModelPortal:P48591 SMR:P48591 DIP:DIP-19582N
MINT:MINT-829510 STRING:P48591 PaxDb:P48591
EnsemblMetazoa:FBtr0080059 GeneID:34392 KEGG:dme:Dmel_CG5371
CTD:34392 FlyBase:FBgn0011703 InParanoid:P48591 OrthoDB:EOG4XKSNZ
PhylomeDB:P48591 GenomeRNAi:34392 NextBio:788275 Bgee:P48591
GermOnline:CG5371 Uniprot:P48591
Length = 812
Score = 1960 (695.0 bits), Expect = 1.5e-202, P = 1.5e-202
Identities = 354/506 (69%), Positives = 431/506 (85%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIYLEPWH D+F+FLELKKNTGKEE RARDLFY LWIPD FM+RVE++ WSLMC
Sbjct: 304 RPGAFAIYLEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMC 363
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
P+ C GL D WG++F+ LY+KYE EG+ R V A+ LWFAI+++Q+ETG PYML+KDACN
Sbjct: 364 PHKCPGLHDVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACN 423
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSNQQN+GTIKCSNLCTEIVEY++ DE+AVCNLASIALNM++ P +KTY+F KLK+V K
Sbjct: 424 RKSNQQNVGTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFVTP-EKTYDFKKLKEVTK 482
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
IVTKNLNKIID+N+YP+ EAR SN+RHRP+GIG+QG AD I MR P++ E+ LLN+QI
Sbjct: 483 IVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYESEEAGLLNQQI 542
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIYYGALEASCE+A +GPY+TYEGSPVS+GILQYDMW PT+LWDW LKE I H
Sbjct: 543 FETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWDWQKLKESIRMH 602
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
GVRNSLL+APMPTASTAQI+GNNESFEPYT+NIY+RRVLSGEFQVVNHHLLRDL EL LW
Sbjct: 603 GVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHLLRDLTELDLW 662
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
DD+MK+Q+I + GSIQ+IE IP K++DLYKTVWEI K+ + MAADRGAFIDQSQS NI+
Sbjct: 663 DDDMKNQIISSRGSIQNIETIPPKVRDLYKTVWEISVKSTIKMAADRGAFIDQSQSFNIH 722
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDARSQ-- 568
+AE NY K++S+HF+ WK GLKTGMYYLRTKPAANAIQFT++K + A +M ++ ++
Sbjct: 723 VAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSMNGQNGTAEGS 782
Query: 569 -EEIQADQEQAMAAMICRRDNKEDCI 593
++ + D+E+ MA M+C +NK+ C+
Sbjct: 783 PQKYEEDRERKMADMVCSLENKDACM 808
Score = 829 (296.9 bits), Expect = 1.3e-153, Sum P(3) = 1.3e-153
Identities = 153/231 (66%), Positives = 191/231 (82%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW PT+LWDW LKE I HGVRNSLL+APMPTASTAQI+GNNESFEPYT+NIY+
Sbjct: 578 QYDMWDKVPTNLWDWQKLKESIRMHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYT 637
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQVVNHHLLRDL EL LWDD+MK+Q+I + GSIQ+IE IP K++DLYKTVWEI
Sbjct: 638 RRVLSGEFQVVNHHLLRDLTELDLWDDDMKNQIISSRGSIQNIETIPPKVRDLYKTVWEI 697
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
K+ + MAADRGAFIDQSQS NI++AE NY K++S+HF+ WK GLKTGMYYLRTKPAAN
Sbjct: 698 SVKSTIKMAADRGAFIDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAAN 757
Query: 950 AIQFTIDKTKMANAMASKDTRSQ---EEIQADQEQAMAAMICRRDNKEDCL 997
AIQFT++K + A +M ++ ++ ++ + D+E+ MA M+C +NK+ C+
Sbjct: 758 AIQFTVNKKQGAVSMNGQNGTAEGSPQKYEEDRERKMADMVCSLENKDACM 808
Score = 374 (136.7 bits), Expect = 1.3e-153, Sum P(3) = 1.3e-153
Identities = 64/86 (74%), Positives = 74/86 (86%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH D+F+FLELKKNTGKEE RARDLFY LWIPD FM+RVE++ WSLMC
Sbjct: 304 RPGAFAIYLEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMC 363
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEG 86
P+ C GL D WG++F+ LY+KYE EG
Sbjct: 364 PHKCPGLHDVWGDEFEKLYEKYEQEG 389
Score = 332 (121.9 bits), Expect = 1.3e-153, Sum P(3) = 1.3e-153
Identities = 59/92 (64%), Positives = 73/92 (79%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
IG+QG AD I MR P++ E+ LLN+QIFETIYYGALEASCE+A +GPY+TYEGSPVS
Sbjct: 514 IGIQGFADALILMRFPYESEEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVS 573
Query: 653 QGILQYDMWGVTPTDLWDWAALKVLALVYGLK 684
+GILQYDMW PT+LWDW LK ++G++
Sbjct: 574 KGILQYDMWDKVPTNLWDWQKLKESIRMHGVR 605
Score = 201 (75.8 bits), Expect = 6.6e-102, Sum P(2) = 6.6e-102
Identities = 48/109 (44%), Positives = 69/109 (63%)
Query: 662 GVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIEE 721
GVT +L D A ++ A + +AIL ++I L+K+ +K+ +V E+
Sbjct: 61 GVTTQEL-DNLAAEIAAGLTCNHPDYAILAARIAVSN---LHKET--KKAFS---DVFED 111
Query: 722 LYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
LYN VNKET + P++S+ HY ++ KNA RLNS+IIYDRDF YN+FGFK
Sbjct: 112 LYNHVNKETNQKVPLVSEFHYNVVKKNATRLNSSIIYDRDFGYNYFGFK 160
Score = 158 (60.7 bits), Expect = 2.3e-97, Sum P(2) = 2.3e-97
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 658 YDMWGVTPTDLWDWAALKVLA--LVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQN 715
+D+WG L++ + A V LWFAI+++Q+ETG PYML+KDACNRKSNQQN
Sbjct: 371 HDVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSNQQN 430
Query: 716 LEVIE 720
+ I+
Sbjct: 431 VGTIK 435
Score = 38 (18.4 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 776 VTPTDLWDWAALKE--KIAKHGVRNSLLIA--PMPTASTAQI 813
VTP +D+ LKE KI + + I P+P A + +
Sbjct: 466 VTPEKTYDFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNL 507
>RGD|1592569 [details] [associations]
symbol:Rrm1 "ribonucleotide reductase M1" species:10116 "Rattus
norvegicus" [GO:0000278 "mitotic cell cycle" evidence=IEP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006206 "pyrimidine nucleobase metabolic process" evidence=IEP]
[GO:0008584 "male gonad development" evidence=IEP] [GO:0010212
"response to ionizing radiation" evidence=IEP] [GO:0021846 "cell
proliferation in forebrain" evidence=IEP] [GO:0042995 "cell
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEP] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477
RGD:1592569 GO:GO:0005524 GO:GO:0005737 GO:GO:0005635 GO:GO:0006260
GO:GO:0043025 GO:GO:0006206 EMBL:CH473956 GO:GO:0010212
GO:GO:0008584 GO:GO:0060041 GO:GO:0042995 GO:GO:0021846
GO:GO:0000278 KO:K10807 InterPro:IPR005144 PROSITE:PS51161
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506
CTD:6240 HOVERGEN:HBG003447 EMBL:BC085906 IPI:IPI00361151
RefSeq:NP_001013254.1 UniGene:Rn.162454 SMR:Q5U2Q5 GeneID:685579
KEGG:rno:685579 ChEMBL:CHEMBL5130 NextBio:729994
Genevestigator:Q5U2Q5 Uniprot:Q5U2Q5
Length = 792
Score = 1958 (694.3 bits), Expect = 2.4e-202, P = 2.4e-202
Identities = 361/503 (71%), Positives = 429/503 (85%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN C GL + WGE+F+ LY+ YE +G+ + V A++LW+AI++SQ ETGTPYMLYKD+CN
Sbjct: 353 PNECPGLDEVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCN 412
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLAS+ALNMY+ P + TY+F KL +V K
Sbjct: 413 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYVTP-EHTYDFEKLAEVTK 471
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
++ +NLNKIID+N+YP+ EA SN RHRPIGIGVQGLAD FI MR PF+ E++LLNKQI
Sbjct: 472 VIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFESPEAQLLNKQI 531
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTDLWDW LKEKIAK+
Sbjct: 532 FETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKLLKEKIAKY 591
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+RRVLSGEFQ+VN HLL+DL E GLW
Sbjct: 592 GIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLW 651
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
++ MK+Q+I NGSIQ I IP+ LK LYKTVWEI QKTVL MAA+RGAFIDQSQSLNI+
Sbjct: 652 NEEMKNQIIACNGSIQSIPEIPEDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIH 711
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDARSQEE 570
+AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN IQFT++K K+ + + A +EE
Sbjct: 712 IAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKD---KEKALKEEE 768
Query: 571 IQADQEQAMAAMICRRDNKEDCI 593
++E+ AAM+C +N+E+C+
Sbjct: 769 ---EKERNTAAMVCSLENREECL 788
Score = 843 (301.8 bits), Expect = 3.3e-157, Sum P(3) = 3.3e-157
Identities = 160/228 (70%), Positives = 190/228 (83%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW VTPTDLWDW LKEKIAK+G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+
Sbjct: 567 QYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYT 626
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQ+VN HLL+DL E GLW++ MK+Q+I NGSIQ I IP+ LK LYKTVWEI
Sbjct: 627 RRVLSGEFQIVNPHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPEDLKQLYKTVWEI 686
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QKTVL MAA+RGAFIDQSQSLNI++AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN
Sbjct: 687 SQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAAN 746
Query: 950 AIQFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICRRDNKEDCL 997
IQFT++K K+ + K + +EE +E+ AAM+C +N+E+CL
Sbjct: 747 PIQFTLNKEKLKDK--EKALKEEEE----KERNTAAMVCSLENREECL 788
Score = 364 (133.2 bits), Expect = 3.3e-157, Sum P(3) = 3.3e-157
Identities = 67/92 (72%), Positives = 76/92 (82%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
IGVQGLAD FI MR PF+ E++LLNKQIFETIYYGALEASC++A GPY+TYEGSPVS
Sbjct: 503 IGVQGLADAFILMRYPFESPEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVS 562
Query: 653 QGILQYDMWGVTPTDLWDWAALKVLALVYGLK 684
+GILQYDMW VTPTDLWDW LK YG++
Sbjct: 563 KGILQYDMWNVTPTDLWDWKLLKEKIAKYGIR 594
Score = 362 (132.5 bits), Expect = 3.3e-157, Sum P(3) = 3.3e-157
Identities = 63/88 (71%), Positives = 74/88 (84%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEGLV 88
PN C GL + WGE+F+ LY+ YE +G V
Sbjct: 353 PNECPGLDEVWGEEFEKLYESYEKQGRV 380
Score = 184 (69.8 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 46/120 (38%), Positives = 69/120 (57%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
++ ++Q GVT +L D A + A + +AIL ++I L+K+
Sbjct: 39 ITMKVIQGLYSGVTTVEL-DTLAAETAATLTTKHPDYAILAARIAVSN---LHKETKKVF 94
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
S +V+E+LYN +N G +PM++ EI+M + DRLNSAIIYDRDF+YN+FGFK
Sbjct: 95 S-----DVMEDLYNYINPHNGRHSPMVASSTLEIVMAHKDRLNSAIIYDRDFSYNYFGFK 149
Score = 164 (62.8 bits), Expect = 3.9e-136, Sum P(3) = 3.9e-136
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 675 KVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
+V +V +LW+AI++SQ ETGTPYMLYKD+CNRKSNQQNL I+
Sbjct: 379 RVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIK 424
>ZFIN|ZDB-GENE-990415-247 [details] [associations]
symbol:rrm1 "ribonucleotide reductase M1
polypeptide" species:7955 "Danio rerio" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009263 "deoxyribonucleotide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477
ZFIN:ZDB-GENE-990415-247 GO:GO:0005524 GO:GO:0006260 GO:GO:0009263
KO:K10807 InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 HOGENOM:HOG000057035
TIGRFAMs:TIGR02506 EMBL:U57964 IPI:IPI00482388 RefSeq:NP_571530.1
UniGene:Dr.33356 ProteinModelPortal:P79732 SMR:P79732 STRING:P79732
PRIDE:P79732 GeneID:30740 KEGG:dre:30740 CTD:6240
HOVERGEN:HBG003447 InParanoid:P79732 OrthoDB:EOG4ZW59G
NextBio:20807088 ArrayExpress:P79732 Uniprot:P79732
Length = 794
Score = 1956 (693.6 bits), Expect = 3.9e-202, P = 3.9e-202
Identities = 363/503 (72%), Positives = 421/503 (83%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFA+YLEPWH DIFDFLELKKNTGKEE RARDLFY LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAMYLEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWSLMC 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN C GL + WGE+F+ LY KYE EG+ R V A++LW+AI++SQ ETGTPYMLYKDACN
Sbjct: 353 PNDCPGLDECWGEEFEKLYAKYEQEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACN 412
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSN+QNLGTIKCSNLCTEIVEYTS DEVAVCNLASIALNMY+ +++T++F KL V K
Sbjct: 413 RKSNRQNLGTIKCSNLCTEIVEYTSADEVAVCNLASIALNMYVT-SERTFDFQKLASVTK 471
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
++ KNLNKIID+N+YPV+EA NSN RHRPIGIGVQGLAD FI MR PF+ E++LLN QI
Sbjct: 472 VIVKNLNKIIDINYYPVKEAENSNKRHRPIGIGVQGLADAFILMRFPFESTEAQLLNTQI 531
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIYY ALE+SCE+AA GPYQTY G PVS+GILQYDMW TPTDLWDWAALKEKIA
Sbjct: 532 FETIYYAALESSCELAAEYGPYQTYAGCPVSKGILQYDMWEKTPTDLWDWAALKEKIAND 591
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
GVRNSLL+APMPTASTAQILGNNES EPYTSNIY RRVLSGEFQ+VN HLL+DL E GLW
Sbjct: 592 GVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYHRRVLSGEFQIVNPHLLKDLTERGLW 651
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
++ MK+Q+I NGSIQ I IP LK+LYKTVWEI QKT+L MAADRGA+IDQSQSLNI+
Sbjct: 652 NEEMKNQIIAQNGSIQTIPAIPDDLKELYKTVWEISQKTILKMAADRGAYIDQSQSLNIH 711
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDARSQEE 570
+AE NY K++SMHF+GWK GLKTGMYYLRTKP AN IQFT++K K+ K S++E
Sbjct: 712 IAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPGANPIQFTLNKEKLKETQ--KTTSSEDE 769
Query: 571 IQADQEQAMAAMICRRDNKEDCI 593
+E+ AAM+C +N+ +C+
Sbjct: 770 --ETKERNKAAMVCSLENRHECL 790
Score = 839 (300.4 bits), Expect = 2.9e-156, Sum P(3) = 2.9e-156
Identities = 159/228 (69%), Positives = 186/228 (81%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW TPTDLWDWAALKEKIA GVRNSLL+APMPTASTAQILGNNES EPYTSNIY
Sbjct: 567 QYDMWEKTPTDLWDWAALKEKIANDGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYH 626
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQ+VN HLL+DL E GLW++ MK+Q+I NGSIQ I IP LK+LYKTVWEI
Sbjct: 627 RRVLSGEFQIVNPHLLKDLTERGLWNEEMKNQIIAQNGSIQTIPAIPDDLKELYKTVWEI 686
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QKT+L MAADRGA+IDQSQSLNI++AE NY K++SMHF+GWK GLKTGMYYLRTKP AN
Sbjct: 687 SQKTILKMAADRGAYIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPGAN 746
Query: 950 AIQFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICRRDNKEDCL 997
IQFT++K K+ K T S++E +E+ AAM+C +N+ +CL
Sbjct: 747 PIQFTLNKEKLKETQ--KTTSSEDE--ETKERNKAAMVCSLENRHECL 790
Score = 376 (137.4 bits), Expect = 2.9e-156, Sum P(3) = 2.9e-156
Identities = 66/86 (76%), Positives = 73/86 (84%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFA+YLEPWH DIFDFLELKKNTGKEE RARDLFY LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAMYLEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWSLMC 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEG 86
PN C GL + WGE+F+ LY KYE EG
Sbjct: 353 PNDCPGLDECWGEEFEKLYAKYEQEG 378
Score = 345 (126.5 bits), Expect = 2.9e-156, Sum P(3) = 2.9e-156
Identities = 64/83 (77%), Positives = 70/83 (84%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
IGVQGLAD FI MR PF+ E++LLN QIFETIYY ALE+SCE+AA GPYQTY G PVS
Sbjct: 503 IGVQGLADAFILMRFPFESTEAQLLNTQIFETIYYAALESSCELAAEYGPYQTYAGCPVS 562
Query: 653 QGILQYDMWGVTPTDLWDWAALK 675
+GILQYDMW TPTDLWDWAALK
Sbjct: 563 KGILQYDMWEKTPTDLWDWAALK 585
Score = 182 (69.1 bits), Expect = 5.9e-101, Sum P(2) = 5.9e-101
Identities = 49/120 (40%), Positives = 68/120 (56%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
++ ++Q GVT +L D A + A +AIL ++I L+K+
Sbjct: 39 ITMKVIQGLYSGVTTVEL-DTLAAETAATSTTKHPDYAILAARIAVSN---LHKETKKVF 94
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
S EV+E+LYN VN +PMIS + +I++ N DRLNSAIIYDRDF+YNFFGFK
Sbjct: 95 S-----EVMEDLYNYVNPLNSRHSPMISKETLDIVLANKDRLNSAIIYDRDFSYNFFGFK 149
Score = 160 (61.4 bits), Expect = 9.2e-137, Sum P(3) = 9.2e-137
Identities = 29/42 (69%), Positives = 36/42 (85%)
Query: 679 LVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
+V +LW+AI++SQ ETGTPYMLYKDACNRKSN+QNL I+
Sbjct: 383 VVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNRQNLGTIK 424
Score = 37 (18.1 bits), Expect = 9.3e-30, Sum P(2) = 9.3e-30
Identities = 14/64 (21%), Positives = 27/64 (42%)
Query: 613 ESRLLNKQIFETIYYGAL---EASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLW 669
E +++N + + + L E +I A++G QT P L +W ++ +
Sbjct: 633 EFQIVNPHLLKDLTERGLWNEEMKNQIIAQNGSIQTIPAIPDDLKELYKTVWEISQKTIL 692
Query: 670 DWAA 673
AA
Sbjct: 693 KMAA 696
>MGI|MGI:98180 [details] [associations]
symbol:Rrm1 "ribonucleotide reductase M1" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate
reductase complex" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IDA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0017076 "purine nucleotide binding" evidence=IDA] [GO:0051259
"protein oligomerization" evidence=IPI] [GO:0051290 "protein
heterotetramerization" evidence=IPI] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
UniPathway:UPA00326 MGI:MGI:98180 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 EMBL:CH466531 GO:GO:0051290 GO:GO:0017076
GO:GO:0009263 KO:K10807 InterPro:IPR005144 PROSITE:PS51161
eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
HOGENOM:HOG000057035 TIGRFAMs:TIGR02506
GeneTree:ENSGT00390000001372 OMA:YKYGVKT CTD:6240
HOVERGEN:HBG003447 OrthoDB:EOG4ZW59G EMBL:K02927 EMBL:AK088043
EMBL:AK137075 EMBL:AK168586 EMBL:BC016450 IPI:IPI00315127
PIR:A24050 RefSeq:NP_033129.2 UniGene:Mm.197486 UniGene:Mm.415177
ProteinModelPortal:P07742 SMR:P07742 STRING:P07742
PhosphoSite:P07742 PaxDb:P07742 PRIDE:P07742
Ensembl:ENSMUST00000033283 GeneID:20133 KEGG:mmu:20133
InParanoid:Q91YM8 BindingDB:P07742 ChEMBL:CHEMBL3739 NextBio:297643
Bgee:P07742 CleanEx:MM_RRM1 Genevestigator:P07742
GermOnline:ENSMUSG00000030978 Uniprot:P07742
Length = 792
Score = 1954 (692.9 bits), Expect = 6.4e-202, P = 6.4e-202
Identities = 361/503 (71%), Positives = 427/503 (84%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN C GL + WGE+F+ LY+ YE +G+ + V A++LW+AI++SQ ETGTPYMLYKD+CN
Sbjct: 353 PNECPGLDEVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCN 412
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLAS+ALNMY+ P + TY+F KL +V K
Sbjct: 413 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYVTP-EHTYDFEKLAEVTK 471
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
++ +NLNKIID+N+YP+ EA SN RHRPIGIGVQGLAD FI MR PF+ E++LLNKQI
Sbjct: 472 VIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFESPEAQLLNKQI 531
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIYYGALEASCE+A GPY+TYEGSPVS+GILQYDMW V PTDLWDW LKEKIAK+
Sbjct: 532 FETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDWKPLKEKIAKY 591
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+RRVLSGEFQ+VN HLL+DL E GLW
Sbjct: 592 GIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLW 651
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
++ MK+Q+I NGSIQ I IP LK LYKTVWEI QKTVL MAA+RGAFIDQSQSLNI+
Sbjct: 652 NEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIH 711
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDARSQEE 570
+AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN IQFT++K K+ + + A +EE
Sbjct: 712 IAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKD---KEKALKEEE 768
Query: 571 IQADQEQAMAAMICRRDNKEDCI 593
++E+ AAM+C +N+E+C+
Sbjct: 769 ---EKERNTAAMVCSLENREECL 788
Score = 836 (299.3 bits), Expect = 2.9e-156, Sum P(3) = 2.9e-156
Identities = 159/228 (69%), Positives = 188/228 (82%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW V PTDLWDW LKEKIAK+G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+
Sbjct: 567 QYDMWNVAPTDLWDWKPLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYT 626
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQ+VN HLL+DL E GLW++ MK+Q+I NGSIQ I IP LK LYKTVWEI
Sbjct: 627 RRVLSGEFQIVNPHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEI 686
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QKTVL MAA+RGAFIDQSQSLNI++AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN
Sbjct: 687 SQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAAN 746
Query: 950 AIQFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICRRDNKEDCL 997
IQFT++K K+ + K + +EE +E+ AAM+C +N+E+CL
Sbjct: 747 PIQFTLNKEKLKDK--EKALKEEEE----KERNTAAMVCSLENREECL 788
Score = 362 (132.5 bits), Expect = 2.9e-156, Sum P(3) = 2.9e-156
Identities = 63/88 (71%), Positives = 74/88 (84%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEGLV 88
PN C GL + WGE+F+ LY+ YE +G V
Sbjct: 353 PNECPGLDEVWGEEFEKLYESYEKQGRV 380
Score = 362 (132.5 bits), Expect = 2.9e-156, Sum P(3) = 2.9e-156
Identities = 67/92 (72%), Positives = 75/92 (81%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
IGVQGLAD FI MR PF+ E++LLNKQIFETIYYGALEASCE+A GPY+TYEGSPVS
Sbjct: 503 IGVQGLADAFILMRYPFESPEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVS 562
Query: 653 QGILQYDMWGVTPTDLWDWAALKVLALVYGLK 684
+GILQYDMW V PTDLWDW LK YG++
Sbjct: 563 KGILQYDMWNVAPTDLWDWKPLKEKIAKYGIR 594
Score = 186 (70.5 bits), Expect = 4.6e-101, Sum P(2) = 4.6e-101
Identities = 46/120 (38%), Positives = 69/120 (57%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
++ ++Q GVT +L D A + A + +AIL ++I L+K+
Sbjct: 39 ITMKVIQGLYSGVTTVEL-DTLAAETAATLTTKHPDYAILAARIAVSN---LHKETKKVF 94
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
S +V+E+LYN +N G +PM++ +I+M N DRLNSAIIYDRDF+YN+FGFK
Sbjct: 95 S-----DVMEDLYNYINPHNGRHSPMVASSTLDIVMANKDRLNSAIIYDRDFSYNYFGFK 149
Score = 164 (62.8 bits), Expect = 2.1e-135, Sum P(3) = 2.1e-135
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 675 KVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
+V +V +LW+AI++SQ ETGTPYMLYKD+CNRKSNQQNL I+
Sbjct: 379 RVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIK 424
>UNIPROTKB|F1SUZ5 [details] [associations]
symbol:F1SUZ5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006260 "DNA replication" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 Pfam:PF03477 GO:GO:0006260 InterPro:IPR005144
PROSITE:PS51161 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 GeneTree:ENSGT00390000001372 EMBL:CU467106
EMBL:CU466349 Ensembl:ENSSSCT00000016142 OMA:XRPGAFA Uniprot:F1SUZ5
Length = 789
Score = 1953 (692.5 bits), Expect = 8.2e-202, P = 8.2e-202
Identities = 364/517 (70%), Positives = 434/517 (83%)
Query: 79 YKKYEAEGLVYF--RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEF 136
+ KY + F RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD F
Sbjct: 277 WHKYSVSLIPRFLHRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLF 336
Query: 137 MRRVESDAQWSLMCPNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQI 196
M+RVE++ WSLMCPN C GL + WGE+F+ LY+ YE +G + V A++LW+AI++SQ
Sbjct: 337 MKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYERQGHVRKVVKAQQLWYAIIESQT 396
Query: 197 ETGTPYMLYKDACNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPA 256
ETGTPYMLYKD+CNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLAS+ALNMY+ +
Sbjct: 397 ETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYVT-S 455
Query: 257 DKTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRL 316
+ TY+FTKL +V K++ +NLNKIID+N+YP+ EA SN RHRPIGIGVQGLAD FI MR
Sbjct: 456 EHTYDFTKLAEVTKVIVRNLNKIIDINYYPIPEASLSNKRHRPIGIGVQGLADAFILMRY 515
Query: 317 PFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTD 376
PF+ E++LLNKQIFETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTD
Sbjct: 516 PFESPEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTD 575
Query: 377 LWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVV 436
LWDW LKEKIAK+G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+RRVLSGEFQ+V
Sbjct: 576 LWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIV 635
Query: 437 NHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAAD 496
N HLL+DL E GLW++ MK+Q+I NGSIQ I IP LK LYKTVWEI QKTVL MAA+
Sbjct: 636 NPHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAE 695
Query: 497 RGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKM 556
RGAFIDQSQSLNI++AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN IQFT++K K+
Sbjct: 696 RGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKL 755
Query: 557 ANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCI 593
+ K+ S+EE ++E+ AAM+C +N+++C+
Sbjct: 756 KD----KEKVSKEE---EKERNTAAMVCSLENRDECL 785
Score = 841 (301.1 bits), Expect = 2.0e-157, Sum P(3) = 2.0e-157
Identities = 160/228 (70%), Positives = 191/228 (83%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW VTPTDLWDW LKEKIAK+G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+
Sbjct: 565 QYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYT 624
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQ+VN HLL+DL E GLW++ MK+Q+I NGSIQ I IP LK LYKTVWEI
Sbjct: 625 RRVLSGEFQIVNPHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEI 684
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QKTVL MAA+RGAFIDQSQSLNI++AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN
Sbjct: 685 SQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAAN 744
Query: 950 AIQFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICRRDNKEDCL 997
IQFT++K K+ + K+ S+EE ++E+ AAM+C +N+++CL
Sbjct: 745 PIQFTLNKEKLKD----KEKVSKEE---EKERNTAAMVCSLENRDECL 785
Score = 369 (135.0 bits), Expect = 2.0e-157, Sum P(3) = 2.0e-157
Identities = 74/137 (54%), Positives = 91/137 (66%)
Query: 548 QFTIDKTKMANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCIGVQGLADLFIQMRL 607
+ T D TK+A + I + A + + ++ IGVQGLAD FI MR
Sbjct: 456 EHTYDFTKLAEVTKVIVRNLNKIIDINYYPIPEASLSNKRHRPIGIGVQGLADAFILMRY 515
Query: 608 PFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTD 667
PF+ E++LLNKQIFETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTD
Sbjct: 516 PFESPEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTD 575
Query: 668 LWDWAALKVLALVYGLK 684
LWDW LK YG++
Sbjct: 576 LWDWKLLKEKIAKYGIR 592
Score = 361 (132.1 bits), Expect = 2.0e-157, Sum P(3) = 2.0e-157
Identities = 63/88 (71%), Positives = 74/88 (84%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 291 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 350
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEGLV 88
PN C GL + WGE+F+ LY+ YE +G V
Sbjct: 351 PNECPGLDEVWGEEFEKLYESYERQGHV 378
Score = 163 (62.4 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 659 DMWGVTPTDLWDWAALK--VLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNL 716
++WG L++ + V +V +LW+AI++SQ ETGTPYMLYKD+CNRKSNQQNL
Sbjct: 359 EVWGEEFEKLYESYERQGHVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 418
Query: 717 EVIE 720
I+
Sbjct: 419 GTIK 422
Score = 85 (35.0 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 28/107 (26%), Positives = 53/107 (49%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
++ ++Q GVT +L D A + A + +AIL ++I L+K+
Sbjct: 39 ITMKVIQGLYSGVTTVEL-DTLAAETAATLTTKHPDYAILAARIAVSN---LHKETKKVF 94
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAII 757
S +V+E+L+N +N G +PM++ +I++ N D++ II
Sbjct: 95 S-----DVMEDLFNYINPHNGKHSPMVARSTLDIVLANKDKIQCFII 136
>UNIPROTKB|F1MSF1 [details] [associations]
symbol:RRM1 "Ribonucleoside-diphosphate reductase"
species:9913 "Bos taurus" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0051290 GO:GO:0009263 InterPro:IPR005144
PROSITE:PS51161 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
OMA:PQARNSN TIGRFAMs:TIGR02506 GeneTree:ENSGT00390000001372
EMBL:DAAA02040985 EMBL:DAAA02040986 IPI:IPI00884866
UniGene:Bt.12465 Ensembl:ENSBTAT00000017428 Uniprot:F1MSF1
Length = 791
Score = 1952 (692.2 bits), Expect = 1.0e-201, P = 1.0e-201
Identities = 362/503 (71%), Positives = 430/503 (85%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN C GL + WGE+F+ LY++YE EG+ + + A++LW+AI++SQ ETGTPYMLYKD+CN
Sbjct: 353 PNECPGLDEVWGEEFEKLYERYEKEGRVRKVIKAQQLWYAIIESQTETGTPYMLYKDSCN 412
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLAS+ALNMY+ ++ TY+FTKL +V K
Sbjct: 413 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYVT-SEHTYDFTKLAEVTK 471
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
++ +NLNKIID+N+YPV EA SN HRPIGIGVQGLAD FI MR PF+ E++LLNKQI
Sbjct: 472 VIVRNLNKIIDINYYPVPEASLSNKLHRPIGIGVQGLADAFILMRYPFESPEAQLLNKQI 531
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTDLWDW LKEKIAK+
Sbjct: 532 FETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDWNLLKEKIAKY 591
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
GVRNSLLIAPMPTASTAQILGNNES EPYTSNIY+RRVLSGEFQ+VN HLL+DL E GLW
Sbjct: 592 GVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLW 651
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
++ MK+Q+I NGSIQ I IP LK LYKTVWEI QKTVL MAA+RGAFIDQSQSLNI+
Sbjct: 652 NEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIH 711
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDARSQEE 570
+AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN IQFT++K K+ + K+ S+EE
Sbjct: 712 IAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKD----KEKVSKEE 767
Query: 571 IQADQEQAMAAMICRRDNKEDCI 593
++E+ AAM+C +N+++C+
Sbjct: 768 ---EKERNTAAMVCSLENRDECL 787
Score = 841 (301.1 bits), Expect = 9.8e-158, Sum P(3) = 9.8e-158
Identities = 161/228 (70%), Positives = 191/228 (83%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW VTPTDLWDW LKEKIAK+GVRNSLLIAPMPTASTAQILGNNES EPYTSNIY+
Sbjct: 567 QYDMWNVTPTDLWDWNLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYT 626
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQ+VN HLL+DL E GLW++ MK+Q+I NGSIQ I IP LK LYKTVWEI
Sbjct: 627 RRVLSGEFQIVNPHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEI 686
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QKTVL MAA+RGAFIDQSQSLNI++AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN
Sbjct: 687 SQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAAN 746
Query: 950 AIQFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICRRDNKEDCL 997
IQFT++K K+ + K+ S+EE ++E+ AAM+C +N+++CL
Sbjct: 747 PIQFTLNKEKLKD----KEKVSKEE---EKERNTAAMVCSLENRDECL 787
Score = 367 (134.2 bits), Expect = 9.8e-158, Sum P(3) = 9.8e-158
Identities = 64/88 (72%), Positives = 75/88 (85%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEGLV 88
PN C GL + WGE+F+ LY++YE EG V
Sbjct: 353 PNECPGLDEVWGEEFEKLYERYEKEGRV 380
Score = 366 (133.9 bits), Expect = 9.8e-158, Sum P(3) = 9.8e-158
Identities = 74/137 (54%), Positives = 91/137 (66%)
Query: 548 QFTIDKTKMANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCIGVQGLADLFIQMRL 607
+ T D TK+A + I + A + + ++ IGVQGLAD FI MR
Sbjct: 458 EHTYDFTKLAEVTKVIVRNLNKIIDINYYPVPEASLSNKLHRPIGIGVQGLADAFILMRY 517
Query: 608 PFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTD 667
PF+ E++LLNKQIFETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTD
Sbjct: 518 PFESPEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTD 577
Query: 668 LWDWAALKVLALVYGLK 684
LWDW LK YG++
Sbjct: 578 LWDWNLLKEKIAKYGVR 594
Score = 178 (67.7 bits), Expect = 9.6e-101, Sum P(2) = 9.6e-101
Identities = 44/120 (36%), Positives = 69/120 (57%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
++ ++Q GVT +L D A + A + +AIL ++I L+K+
Sbjct: 39 ITMKVIQGLYSGVTTVEL-DTLAAETAATLTTKHPDYAILAARIAVSN---LHKETKKVF 94
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
S +V+E+L+N +N G +PM++ +I++ N DRLNSAIIYDRDF+YN+FGFK
Sbjct: 95 S-----DVMEDLFNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFK 149
Score = 163 (62.4 bits), Expect = 2.4e-136, Sum P(3) = 2.4e-136
Identities = 29/46 (63%), Positives = 38/46 (82%)
Query: 675 KVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
+V ++ +LW+AI++SQ ETGTPYMLYKD+CNRKSNQQNL I+
Sbjct: 379 RVRKVIKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIK 424
>UNIPROTKB|P23921 [details] [associations]
symbol:RRM1 "Ribonucleoside-diphosphate reductase large
subunit" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=NAS] [GO:0006260 "DNA replication"
evidence=IEA;NAS] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=ISS;NAS]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055086 "nucleobase-containing
small molecule metabolic process" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] Reactome:REACT_111217
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005829
GO:GO:0005524 GO:GO:0005654 GO:GO:0006260 DrugBank:DB01073
GO:GO:0051290 GO:GO:0015949 DrugBank:DB00441 DrugBank:DB00631
GO:GO:0009263 KO:K10807 InterPro:IPR005144 PROSITE:PS51161
eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
HOGENOM:HOG000057035 OMA:PQARNSN TIGRFAMs:TIGR02506 CTD:6240
HOVERGEN:HBG003447 OrthoDB:EOG4ZW59G EMBL:X59543 EMBL:X59617
EMBL:AF107045 EMBL:BC006498 EMBL:L10342 IPI:IPI00013871 PIR:S16680
RefSeq:NP_001024.1 UniGene:Hs.445705 PDB:2WGH PDB:3HNC PDB:3HND
PDB:3HNE PDB:3HNF PDBsum:2WGH PDBsum:3HNC PDBsum:3HND PDBsum:3HNE
PDBsum:3HNF ProteinModelPortal:P23921 SMR:P23921 DIP:DIP-24233N
IntAct:P23921 MINT:MINT-1406473 STRING:P23921 PhosphoSite:P23921
DMDM:132608 PaxDb:P23921 PeptideAtlas:P23921 PRIDE:P23921
DNASU:6240 Ensembl:ENST00000300738 GeneID:6240 KEGG:hsa:6240
UCSC:uc001lyw.4 GeneCards:GC11P004115 HGNC:HGNC:10451 HPA:CAB022093
MIM:180410 neXtProt:NX_P23921 PharmGKB:PA298 InParanoid:P23921
PhylomeDB:P23921 BindingDB:P23921 ChEMBL:CHEMBL1830 ChiTaRS:RRM1
DrugBank:DB01005 EvolutionaryTrace:P23921 GenomeRNAi:6240
NextBio:24233 ArrayExpress:P23921 Bgee:P23921 CleanEx:HS_RRM1
Genevestigator:P23921 GermOnline:ENSG00000167325 Uniprot:P23921
Length = 792
Score = 1949 (691.1 bits), Expect = 2.2e-201, P = 2.2e-201
Identities = 362/503 (71%), Positives = 427/503 (84%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN C GL + WGE+F+ LY YE +G+ + V A++LW+AI++SQ ETGTPYMLYKD+CN
Sbjct: 353 PNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCN 412
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLAS+ALNMY+ ++ TY+F KL +V K
Sbjct: 413 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYVT-SEHTYDFKKLAEVTK 471
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
+V +NLNKIID+N+YPV EA SN RHRPIGIGVQGLAD FI MR PF+ E++LLNKQI
Sbjct: 472 VVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQI 531
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTDLWDW LKEKIAK+
Sbjct: 532 FETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKY 591
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+RRVLSGEFQ+VN HLL+DL E GLW
Sbjct: 592 GIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLW 651
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
+ MK+Q+I NGSIQ I IP LK LYKTVWEI QKTVL MAA+RGAFIDQSQSLNI+
Sbjct: 652 HEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIH 711
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDARSQEE 570
+AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN IQFT++K K+ + K+ S+EE
Sbjct: 712 IAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKD----KEKVSKEE 767
Query: 571 IQADQEQAMAAMICRRDNKEDCI 593
++E+ AAM+C +N+++C+
Sbjct: 768 --EEKERNTAAMVCSLENRDECL 788
Score = 841 (301.1 bits), Expect = 2.6e-157, Sum P(3) = 2.6e-157
Identities = 160/228 (70%), Positives = 190/228 (83%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW VTPTDLWDW LKEKIAK+G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+
Sbjct: 567 QYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYT 626
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQ+VN HLL+DL E GLW + MK+Q+I NGSIQ I IP LK LYKTVWEI
Sbjct: 627 RRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEI 686
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QKTVL MAA+RGAFIDQSQSLNI++AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN
Sbjct: 687 SQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAAN 746
Query: 950 AIQFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICRRDNKEDCL 997
IQFT++K K+ + K+ S+EE ++E+ AAM+C +N+++CL
Sbjct: 747 PIQFTLNKEKLKD----KEKVSKEE--EEKERNTAAMVCSLENRDECL 788
Score = 369 (135.0 bits), Expect = 2.6e-157, Sum P(3) = 2.6e-157
Identities = 73/137 (53%), Positives = 90/137 (65%)
Query: 548 QFTIDKTKMANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCIGVQGLADLFIQMRL 607
+ T D K+A + I + A + + ++ IGVQGLAD FI MR
Sbjct: 458 EHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRY 517
Query: 608 PFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTD 667
PF+ E++LLNKQIFETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTD
Sbjct: 518 PFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTD 577
Query: 668 LWDWAALKVLALVYGLK 684
LWDW LK YG++
Sbjct: 578 LWDWKVLKEKIAKYGIR 594
Score = 360 (131.8 bits), Expect = 2.6e-157, Sum P(3) = 2.6e-157
Identities = 63/88 (71%), Positives = 73/88 (82%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEGLV 88
PN C GL + WGE+F+ LY YE +G V
Sbjct: 353 PNECPGLDEVWGEEFEKLYASYEKQGRV 380
Score = 182 (69.1 bits), Expect = 3.6e-101, Sum P(2) = 3.6e-101
Identities = 45/120 (37%), Positives = 69/120 (57%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
++ ++Q GVT +L D A + A + +AIL ++I L+K+
Sbjct: 39 ITMKVIQGLYSGVTTVEL-DTLAAETAATLTTKHPDYAILAARIAVSN---LHKETKKVF 94
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
S +V+E+LYN +N G +PM++ +I++ N DRLNSAIIYDRDF+YN+FGFK
Sbjct: 95 S-----DVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFK 149
Score = 164 (62.8 bits), Expect = 1.0e-135, Sum P(3) = 1.0e-135
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 675 KVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
+V +V +LW+AI++SQ ETGTPYMLYKD+CNRKSNQQNL I+
Sbjct: 379 RVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIK 424
>UNIPROTKB|E9PD78 [details] [associations]
symbol:RRM1 "Ribonucleoside-diphosphate reductase"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 GO:GO:0005524 GO:GO:0006260
GO:GO:0051290 GO:GO:0009263 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 TIGRFAMs:TIGR02506 HGNC:HGNC:10451 ChiTaRS:RRM1
EMBL:AC015689 IPI:IPI00943207 ProteinModelPortal:E9PD78 SMR:E9PD78
Ensembl:ENST00000423050 ArrayExpress:E9PD78 Bgee:E9PD78
Uniprot:E9PD78
Length = 695
Score = 1949 (691.1 bits), Expect = 2.2e-201, P = 2.2e-201
Identities = 362/503 (71%), Positives = 427/503 (84%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 196 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 255
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN C GL + WGE+F+ LY YE +G+ + V A++LW+AI++SQ ETGTPYMLYKD+CN
Sbjct: 256 PNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCN 315
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLAS+ALNMY+ ++ TY+F KL +V K
Sbjct: 316 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYVT-SEHTYDFKKLAEVTK 374
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
+V +NLNKIID+N+YPV EA SN RHRPIGIGVQGLAD FI MR PF+ E++LLNKQI
Sbjct: 375 VVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQI 434
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTDLWDW LKEKIAK+
Sbjct: 435 FETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKY 494
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+RRVLSGEFQ+VN HLL+DL E GLW
Sbjct: 495 GIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLW 554
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
+ MK+Q+I NGSIQ I IP LK LYKTVWEI QKTVL MAA+RGAFIDQSQSLNI+
Sbjct: 555 HEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIH 614
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDARSQEE 570
+AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN IQFT++K K+ + K+ S+EE
Sbjct: 615 IAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKD----KEKVSKEE 670
Query: 571 IQADQEQAMAAMICRRDNKEDCI 593
++E+ AAM+C +N+++C+
Sbjct: 671 --EEKERNTAAMVCSLENRDECL 691
Score = 841 (301.1 bits), Expect = 2.6e-157, Sum P(3) = 2.6e-157
Identities = 160/228 (70%), Positives = 190/228 (83%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW VTPTDLWDW LKEKIAK+G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+
Sbjct: 470 QYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYT 529
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQ+VN HLL+DL E GLW + MK+Q+I NGSIQ I IP LK LYKTVWEI
Sbjct: 530 RRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEI 589
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QKTVL MAA+RGAFIDQSQSLNI++AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN
Sbjct: 590 SQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAAN 649
Query: 950 AIQFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICRRDNKEDCL 997
IQFT++K K+ + K+ S+EE ++E+ AAM+C +N+++CL
Sbjct: 650 PIQFTLNKEKLKD----KEKVSKEE--EEKERNTAAMVCSLENRDECL 691
Score = 369 (135.0 bits), Expect = 2.6e-157, Sum P(3) = 2.6e-157
Identities = 73/137 (53%), Positives = 90/137 (65%)
Query: 548 QFTIDKTKMANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCIGVQGLADLFIQMRL 607
+ T D K+A + I + A + + ++ IGVQGLAD FI MR
Sbjct: 361 EHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRY 420
Query: 608 PFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTD 667
PF+ E++LLNKQIFETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTD
Sbjct: 421 PFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTD 480
Query: 668 LWDWAALKVLALVYGLK 684
LWDW LK YG++
Sbjct: 481 LWDWKVLKEKIAKYGIR 497
Score = 360 (131.8 bits), Expect = 2.6e-157, Sum P(3) = 2.6e-157
Identities = 63/88 (71%), Positives = 73/88 (82%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 196 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 255
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEGLV 88
PN C GL + WGE+F+ LY YE +G V
Sbjct: 256 PNECPGLDEVWGEEFEKLYASYEKQGRV 283
Score = 172 (65.6 bits), Expect = 4.1e-100, Sum P(2) = 4.1e-100
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 719 IEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
+E+LYN +N G +PM++ +I++ N DRLNSAIIYDRDF+YN+FGFK
Sbjct: 1 MEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFK 52
Score = 164 (62.8 bits), Expect = 1.0e-135, Sum P(3) = 1.0e-135
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 675 KVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
+V +V +LW+AI++SQ ETGTPYMLYKD+CNRKSNQQNL I+
Sbjct: 282 RVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIK 327
>UNIPROTKB|E9PL69 [details] [associations]
symbol:RRM1 "Ribonucleoside-diphosphate reductase large
subunit" species:9606 "Homo sapiens" [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=IEA]
[GO:0017076 "purine nucleotide binding" evidence=IEA] [GO:0051290
"protein heterotetramerization" evidence=IEA] InterPro:IPR000788
InterPro:IPR013346 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
GO:GO:0006260 GO:GO:0051290 GO:GO:0017076 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 TIGRFAMs:TIGR02506 HGNC:HGNC:10451
ChiTaRS:RRM1 EMBL:AC015689 IPI:IPI01008934
ProteinModelPortal:E9PL69 SMR:E9PL69 Ensembl:ENST00000534285
ArrayExpress:E9PL69 Bgee:E9PL69 Uniprot:E9PL69
Length = 570
Score = 1949 (691.1 bits), Expect = 2.2e-201, P = 2.2e-201
Identities = 362/503 (71%), Positives = 427/503 (84%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 71 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 130
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN C GL + WGE+F+ LY YE +G+ + V A++LW+AI++SQ ETGTPYMLYKD+CN
Sbjct: 131 PNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCN 190
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLAS+ALNMY+ ++ TY+F KL +V K
Sbjct: 191 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYVT-SEHTYDFKKLAEVTK 249
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
+V +NLNKIID+N+YPV EA SN RHRPIGIGVQGLAD FI MR PF+ E++LLNKQI
Sbjct: 250 VVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQI 309
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTDLWDW LKEKIAK+
Sbjct: 310 FETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKY 369
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+RRVLSGEFQ+VN HLL+DL E GLW
Sbjct: 370 GIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLW 429
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
+ MK+Q+I NGSIQ I IP LK LYKTVWEI QKTVL MAA+RGAFIDQSQSLNI+
Sbjct: 430 HEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIH 489
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDARSQEE 570
+AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN IQFT++K K+ + K+ S+EE
Sbjct: 490 IAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKD----KEKVSKEE 545
Query: 571 IQADQEQAMAAMICRRDNKEDCI 593
++E+ AAM+C +N+++C+
Sbjct: 546 --EEKERNTAAMVCSLENRDECL 566
Score = 841 (301.1 bits), Expect = 2.6e-157, Sum P(3) = 2.6e-157
Identities = 160/228 (70%), Positives = 190/228 (83%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW VTPTDLWDW LKEKIAK+G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+
Sbjct: 345 QYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYT 404
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQ+VN HLL+DL E GLW + MK+Q+I NGSIQ I IP LK LYKTVWEI
Sbjct: 405 RRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEI 464
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QKTVL MAA+RGAFIDQSQSLNI++AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN
Sbjct: 465 SQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAAN 524
Query: 950 AIQFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICRRDNKEDCL 997
IQFT++K K+ + K+ S+EE ++E+ AAM+C +N+++CL
Sbjct: 525 PIQFTLNKEKLKD----KEKVSKEE--EEKERNTAAMVCSLENRDECL 566
Score = 369 (135.0 bits), Expect = 2.6e-157, Sum P(3) = 2.6e-157
Identities = 73/137 (53%), Positives = 90/137 (65%)
Query: 548 QFTIDKTKMANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCIGVQGLADLFIQMRL 607
+ T D K+A + I + A + + ++ IGVQGLAD FI MR
Sbjct: 236 EHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRY 295
Query: 608 PFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTD 667
PF+ E++LLNKQIFETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTD
Sbjct: 296 PFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTD 355
Query: 668 LWDWAALKVLALVYGLK 684
LWDW LK YG++
Sbjct: 356 LWDWKVLKEKIAKYGIR 372
Score = 360 (131.8 bits), Expect = 2.6e-157, Sum P(3) = 2.6e-157
Identities = 63/88 (71%), Positives = 73/88 (82%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 71 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 130
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEGLV 88
PN C GL + WGE+F+ LY YE +G V
Sbjct: 131 PNECPGLDEVWGEEFEKLYASYEKQGRV 158
Score = 164 (62.8 bits), Expect = 1.0e-135, Sum P(3) = 1.0e-135
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 675 KVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
+V +V +LW+AI++SQ ETGTPYMLYKD+CNRKSNQQNL I+
Sbjct: 157 RVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIK 202
>UNIPROTKB|Q5R919 [details] [associations]
symbol:RRM1 "Ribonucleoside-diphosphate reductase large
subunit" species:9601 "Pongo abelii" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0009263 KO:K10807 InterPro:IPR005144
PROSITE:PS51161 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 CTD:6240 HOVERGEN:HBG003447 HSSP:P21524
EMBL:CR859577 RefSeq:NP_001126012.1 UniGene:Pab.9179
ProteinModelPortal:Q5R919 SMR:Q5R919 PRIDE:Q5R919 GeneID:100172956
KEGG:pon:100172956 InParanoid:Q5R919 Uniprot:Q5R919
Length = 792
Score = 1943 (689.0 bits), Expect = 9.4e-201, P = 9.4e-201
Identities = 361/503 (71%), Positives = 427/503 (84%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN C GL + WGE+F+ LY YE +G+ + V A++LW+AI++SQ ETGTPYMLYKD+CN
Sbjct: 353 PNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCN 412
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSNQQNLGTIKCS+LCTEIVEYTSKDEVAVCNLAS+ALNMY+ ++ TY+F KL +V K
Sbjct: 413 RKSNQQNLGTIKCSSLCTEIVEYTSKDEVAVCNLASLALNMYVT-SEHTYDFKKLAEVTK 471
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
+V +NLNKIID+N+YPV EA SN RHRPIGIGVQGLAD FI MR PF+ E++LLNKQI
Sbjct: 472 VVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQI 531
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTDLWDW LKEKIAK+
Sbjct: 532 FETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKLLKEKIAKY 591
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+RRVLSGEFQ+VN HLL+DL E GLW
Sbjct: 592 GIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLW 651
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
+ MK+Q+I NGSIQ I IP LK LYKTVWEI QKTVL MAA+RGAFIDQSQSLNI+
Sbjct: 652 HEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIH 711
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDARSQEE 570
+AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN IQFT++K K+ + K+ S+EE
Sbjct: 712 IAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKD----KEKVSKEE 767
Query: 571 IQADQEQAMAAMICRRDNKEDCI 593
++E+ AAM+C +N+++C+
Sbjct: 768 --EEKERNTAAMVCSLENRDECL 788
Score = 840 (300.8 bits), Expect = 4.2e-157, Sum P(3) = 4.2e-157
Identities = 160/228 (70%), Positives = 190/228 (83%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW VTPTDLWDW LKEKIAK+G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+
Sbjct: 567 QYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYT 626
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQ+VN HLL+DL E GLW + MK+Q+I NGSIQ I IP LK LYKTVWEI
Sbjct: 627 RRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEI 686
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QKTVL MAA+RGAFIDQSQSLNI++AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN
Sbjct: 687 SQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAAN 746
Query: 950 AIQFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICRRDNKEDCL 997
IQFT++K K+ + K+ S+EE ++E+ AAM+C +N+++CL
Sbjct: 747 PIQFTLNKEKLKD----KEKVSKEE--EEKERNTAAMVCSLENRDECL 788
Score = 368 (134.6 bits), Expect = 4.2e-157, Sum P(3) = 4.2e-157
Identities = 73/137 (53%), Positives = 90/137 (65%)
Query: 548 QFTIDKTKMANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCIGVQGLADLFIQMRL 607
+ T D K+A + I + A + + ++ IGVQGLAD FI MR
Sbjct: 458 EHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRY 517
Query: 608 PFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTD 667
PF+ E++LLNKQIFETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTD
Sbjct: 518 PFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTD 577
Query: 668 LWDWAALKVLALVYGLK 684
LWDW LK YG++
Sbjct: 578 LWDWKLLKEKIAKYGIR 594
Score = 360 (131.8 bits), Expect = 4.2e-157, Sum P(3) = 4.2e-157
Identities = 63/88 (71%), Positives = 73/88 (82%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEGLV 88
PN C GL + WGE+F+ LY YE +G V
Sbjct: 353 PNECPGLDEVWGEEFEKLYASYEKQGRV 380
Score = 186 (70.5 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 46/120 (38%), Positives = 70/120 (58%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
++ ++Q GVT +L D A + A + +AIL ++I L+K+A
Sbjct: 39 ITMKVIQGLYSGVTTVEL-DTLAAETAATLTTKHPDYAILAARIAVSN---LHKEAKKVF 94
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
S +V+E+LYN +N G +PM++ +I++ N DRLNSAIIYDRDF+YN+FGFK
Sbjct: 95 S-----DVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFK 149
Score = 164 (62.8 bits), Expect = 1.3e-135, Sum P(3) = 1.3e-135
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 675 KVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
+V +V +LW+AI++SQ ETGTPYMLYKD+CNRKSNQQNL I+
Sbjct: 379 RVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIK 424
>UNIPROTKB|E2R8P1 [details] [associations]
symbol:RRM1 "Ribonucleoside-diphosphate reductase"
species:9615 "Canis lupus familiaris" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0051290 GO:GO:0009263 KO:K10807
InterPro:IPR005144 PROSITE:PS51161 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 OMA:PQARNSN TIGRFAMs:TIGR02506
GeneTree:ENSGT00390000001372 CTD:6240 EMBL:AAEX03012836
RefSeq:XP_534027.2 Ensembl:ENSCAFT00000009652 GeneID:476823
KEGG:cfa:476823 NextBio:20852423 Uniprot:E2R8P1
Length = 792
Score = 1943 (689.0 bits), Expect = 9.4e-201, P = 9.4e-201
Identities = 360/503 (71%), Positives = 428/503 (85%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN C GL + WGE+F+ LY+ YE +G+ + V A++LW+AI++SQ ETGTPYMLYKD+CN
Sbjct: 353 PNECPGLDEVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCN 412
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLAS+ALNMY+ ++ TY+F KL +V K
Sbjct: 413 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYVT-SEHTYDFKKLAEVTK 471
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
++ +NLNKIID+N+YPV EA SN RHRPIGIGVQGLAD FI MR PF+ E++LLNKQI
Sbjct: 472 VIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFESPEAQLLNKQI 531
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPT+LWDW LKEKIAK+
Sbjct: 532 FETIYYGALEASCDLAKEHGPYETYEGSPVSRGILQYDMWNVTPTELWDWKLLKEKIAKY 591
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
GVRNSLLIAPMPTASTAQILGNNES EPYTSNIY+RRVLSGEFQ+VN HLL+DL E GLW
Sbjct: 592 GVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLW 651
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
++ MK+Q+I NGSIQ I IP LK LYKTVWEI QK VL MAA+RGAFIDQSQSLNI+
Sbjct: 652 NEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKIVLKMAAERGAFIDQSQSLNIH 711
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDARSQEE 570
+AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN IQFT++K K+ + K+ ++EE
Sbjct: 712 IAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKD----KEKATKEE 767
Query: 571 IQADQEQAMAAMICRRDNKEDCI 593
++E+ AAM+C +N+E+C+
Sbjct: 768 --EEKERNTAAMVCSLENREECL 788
Score = 838 (300.0 bits), Expect = 2.3e-156, Sum P(3) = 2.3e-156
Identities = 160/228 (70%), Positives = 189/228 (82%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW VTPT+LWDW LKEKIAK+GVRNSLLIAPMPTASTAQILGNNES EPYTSNIY+
Sbjct: 567 QYDMWNVTPTELWDWKLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYT 626
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQ+VN HLL+DL E GLW++ MK+Q+I NGSIQ I IP LK LYKTVWEI
Sbjct: 627 RRVLSGEFQIVNPHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEI 686
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QK VL MAA+RGAFIDQSQSLNI++AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN
Sbjct: 687 SQKIVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAAN 746
Query: 950 AIQFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICRRDNKEDCL 997
IQFT++K K+ + K T+ +EE +E+ AAM+C +N+E+CL
Sbjct: 747 PIQFTLNKEKLKDK--EKATKEEEE----KERNTAAMVCSLENREECL 788
Score = 362 (132.5 bits), Expect = 2.3e-156, Sum P(3) = 2.3e-156
Identities = 63/88 (71%), Positives = 74/88 (84%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEGLV 88
PN C GL + WGE+F+ LY+ YE +G V
Sbjct: 353 PNECPGLDEVWGEEFEKLYESYEKQGRV 380
Score = 361 (132.1 bits), Expect = 2.3e-156, Sum P(3) = 2.3e-156
Identities = 66/92 (71%), Positives = 76/92 (82%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
IGVQGLAD FI MR PF+ E++LLNKQIFETIYYGALEASC++A GPY+TYEGSPVS
Sbjct: 503 IGVQGLADAFILMRYPFESPEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVS 562
Query: 653 QGILQYDMWGVTPTDLWDWAALKVLALVYGLK 684
+GILQYDMW VTPT+LWDW LK YG++
Sbjct: 563 RGILQYDMWNVTPTELWDWKLLKEKIAKYGVR 594
Score = 182 (69.1 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 45/120 (37%), Positives = 69/120 (57%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
++ ++Q GVT +L D A + A + +AIL ++I L+K+
Sbjct: 39 ITMKVIQGLYSGVTTVEL-DTLAAETAATLTTKHPDYAILAARIAVSN---LHKETKKVF 94
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
S +V+E+LYN +N G +PM++ +I++ N DRLNSAIIYDRDF+YN+FGFK
Sbjct: 95 S-----DVMEDLYNYINPHNGRHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFK 149
Score = 164 (62.8 bits), Expect = 1.3e-135, Sum P(3) = 1.3e-135
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 675 KVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
+V +V +LW+AI++SQ ETGTPYMLYKD+CNRKSNQQNL I+
Sbjct: 379 RVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIK 424
>WB|WBGene00004391 [details] [associations]
symbol:rnr-1 species:6239 "Caenorhabditis elegans"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040017 "positive regulation of
locomotion" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477
GO:GO:0005524 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0006260 GO:GO:0040011 GO:GO:0040017
GO:GO:0040035 GO:GO:0009263 KO:K10807 InterPro:IPR005144
PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 EMBL:Z19158 HOGENOM:HOG000057035 TIGRFAMs:TIGR02506
PIR:S28302 RefSeq:NP_499039.1 ProteinModelPortal:Q03604 SMR:Q03604
DIP:DIP-26889N IntAct:Q03604 MINT:MINT-1080458 STRING:Q03604
PaxDb:Q03604 PRIDE:Q03604 EnsemblMetazoa:T23G5.1.1
EnsemblMetazoa:T23G5.1.2 EnsemblMetazoa:T23G5.1.3 GeneID:176301
KEGG:cel:CELE_T23G5.1 UCSC:T23G5.1.2 CTD:176301 WormBase:T23G5.1
GeneTree:ENSGT00390000001372 InParanoid:Q03604 OMA:YKYGVKT
NextBio:891992 Uniprot:Q03604
Length = 788
Score = 1870 (663.3 bits), Expect = 5.1e-193, P = 5.1e-193
Identities = 346/484 (71%), Positives = 408/484 (84%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIYLEPWH DIF+F+ L+KNTG EE RARDLF LWIPD FM+RVE D +WSLMC
Sbjct: 299 RPGAFAIYLEPWHADIFEFVSLRKNTGPEEERARDLFLALWIPDLFMKRVEKDQEWSLMC 358
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
P C GL D WGE+F+ LY KYEAEG+ + V ARKLW I+ +QIETG PY+ YKDA N
Sbjct: 359 PCECPGLDDCWGEEFEALYAKYEAEGRVRKTVKARKLWEHIVSNQIETGLPYITYKDAAN 418
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSNQQNLGTIKCSNLCTEI+EY++ DE+AVCNLASIALN Y+ P +K ++F KL +V K
Sbjct: 419 RKSNQQNLGTIKCSNLCTEIIEYSAPDEIAVCNLASIALNRYVTP-EKKFDFVKLAEVTK 477
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
++T+NLNKIIDVN+YPVEEARNSNMRHRPIG+GVQGLAD F+ MR PF E+R LNK+I
Sbjct: 478 VITRNLNKIIDVNYYPVEEARNSNMRHRPIGLGVQGLADCFMLMRYPFTSAEARDLNKRI 537
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIYY ALEASCE+A +GPY TYEGSPVS+G LQ+DMWGVTPTD DWA L++KIAKH
Sbjct: 538 FETIYYAALEASCELAELNGPYSTYEGSPVSKGQLQFDMWGVTPTDQCDWATLRKKIAKH 597
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
G+RNSLL+APMPTASTAQILGNNES EPYTSNIYSRRVLSG+FQ+VN H+L+DLVE GLW
Sbjct: 598 GIRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHMLKDLVERGLW 657
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
D MK++LI NNGSIQ+I+GIP +K+LY+TVWEI QK +++MAADRGA+IDQSQSLNI+
Sbjct: 658 TDEMKNRLIANNGSIQNIDGIPSDIKELYRTVWEISQKDIIEMAADRGAYIDQSQSLNIH 717
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKM-ANAMASKDA---R 566
MA+ +YA ++SMHF+GWK GLKTGMYYLRTKPA NA+QFT+DK + N A A
Sbjct: 718 MAKPSYAGITSMHFYGWKKGLKTGMYYLRTKPAVNAVQFTVDKNALKTNQQAETPATVAE 777
Query: 567 SQEE 570
SQ+E
Sbjct: 778 SQDE 781
Score = 792 (283.9 bits), Expect = 7.0e-147, Sum P(3) = 7.0e-147
Identities = 147/209 (70%), Positives = 178/209 (85%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
++DMWGVTPTD DWA L++KIAKHG+RNSLL+APMPTASTAQILGNNES EPYTSNIYS
Sbjct: 573 QFDMWGVTPTDQCDWATLRKKIAKHGIRNSLLMAPMPTASTAQILGNNESIEPYTSNIYS 632
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSG+FQ+VN H+L+DLVE GLW D MK++LI NNGSIQ+I+GIP +K+LY+TVWEI
Sbjct: 633 RRVLSGDFQIVNPHMLKDLVERGLWTDEMKNRLIANNGSIQNIDGIPSDIKELYRTVWEI 692
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QK +++MAADRGA+IDQSQSLNI+MA+ +YA ++SMHF+GWK GLKTGMYYLRTKPA N
Sbjct: 693 SQKDIIEMAADRGAYIDQSQSLNIHMAKPSYAGITSMHFYGWKKGLKTGMYYLRTKPAVN 752
Query: 950 AIQFTIDKTKM-ANAMASKDT---RSQEE 974
A+QFT+DK + N A SQ+E
Sbjct: 753 AVQFTVDKNALKTNQQAETPATVAESQDE 781
Score = 360 (131.8 bits), Expect = 7.0e-147, Sum P(3) = 7.0e-147
Identities = 64/88 (72%), Positives = 71/88 (80%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH DIF+F+ L+KNTG EE RARDLF LWIPD FM+RVE D +WSLMC
Sbjct: 299 RPGAFAIYLEPWHADIFEFVSLRKNTGPEEERARDLFLALWIPDLFMKRVEKDQEWSLMC 358
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEGLV 88
P C GL D WGE+F+ LY KYEAEG V
Sbjct: 359 PCECPGLDDCWGEEFEALYAKYEAEGRV 386
Score = 319 (117.4 bits), Expect = 7.0e-147, Sum P(3) = 7.0e-147
Identities = 60/92 (65%), Positives = 72/92 (78%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+GVQGLAD F+ MR PF E+R LNK+IFETIYY ALEASCE+A +GPY TYEGSPVS
Sbjct: 509 LGVQGLADCFMLMRYPFTSAEARDLNKRIFETIYYAALEASCELAELNGPYSTYEGSPVS 568
Query: 653 QGILQYDMWGVTPTDLWDWAALKVLALVYGLK 684
+G LQ+DMWGVTPTD DWA L+ +G++
Sbjct: 569 KGQLQFDMWGVTPTDQCDWATLRKKIAKHGIR 600
Score = 173 (66.0 bits), Expect = 4.8e-95, Sum P(2) = 4.8e-95
Identities = 32/63 (50%), Positives = 47/63 (74%)
Query: 708 NRKSNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFF 767
++K+N+ EV++ L+ + TG PMISD+ + II KNAD+LNSAI+YDRD++Y +F
Sbjct: 93 HKKTNKVFSEVMKTLHEFHHPHTGKHAPMISDETWAIIEKNADKLNSAIVYDRDYSYTYF 152
Query: 768 GFK 770
GFK
Sbjct: 153 GFK 155
Score = 133 (51.9 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
Identities = 32/64 (50%), Positives = 38/64 (59%)
Query: 659 DMWGVTPTDLWDW--AALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNL 716
D WG L+ A +V V KLW I+ +QIETG PY+ YKDA NRKSNQQNL
Sbjct: 367 DCWGEEFEALYAKYEAEGRVRKTVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNL 426
Query: 717 EVIE 720
I+
Sbjct: 427 GTIK 430
Score = 44 (20.5 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 631 EASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAA 673
E + A +G Q +G P L +W ++ D+ + AA
Sbjct: 660 EMKNRLIANNGSIQNIDGIPSDIKELYRTVWEISQKDIIEMAA 702
Score = 37 (18.1 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 935 LKTGMYYLRTKPAAN 949
++TG+ Y+ K AAN
Sbjct: 404 IETGLPYITYKDAAN 418
>UNIPROTKB|Q03604 [details] [associations]
symbol:rnr-1 "Ribonucleoside-diphosphate reductase large
subunit" species:6239 "Caenorhabditis elegans" [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0006915 GO:GO:0002119 GO:GO:0006260
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0009263 KO:K10807
InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 EMBL:Z19158 HOGENOM:HOG000057035
TIGRFAMs:TIGR02506 PIR:S28302 RefSeq:NP_499039.1
ProteinModelPortal:Q03604 SMR:Q03604 DIP:DIP-26889N IntAct:Q03604
MINT:MINT-1080458 STRING:Q03604 PaxDb:Q03604 PRIDE:Q03604
EnsemblMetazoa:T23G5.1.1 EnsemblMetazoa:T23G5.1.2
EnsemblMetazoa:T23G5.1.3 GeneID:176301 KEGG:cel:CELE_T23G5.1
UCSC:T23G5.1.2 CTD:176301 WormBase:T23G5.1
GeneTree:ENSGT00390000001372 InParanoid:Q03604 OMA:YKYGVKT
NextBio:891992 Uniprot:Q03604
Length = 788
Score = 1870 (663.3 bits), Expect = 5.1e-193, P = 5.1e-193
Identities = 346/484 (71%), Positives = 408/484 (84%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIYLEPWH DIF+F+ L+KNTG EE RARDLF LWIPD FM+RVE D +WSLMC
Sbjct: 299 RPGAFAIYLEPWHADIFEFVSLRKNTGPEEERARDLFLALWIPDLFMKRVEKDQEWSLMC 358
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
P C GL D WGE+F+ LY KYEAEG+ + V ARKLW I+ +QIETG PY+ YKDA N
Sbjct: 359 PCECPGLDDCWGEEFEALYAKYEAEGRVRKTVKARKLWEHIVSNQIETGLPYITYKDAAN 418
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSNQQNLGTIKCSNLCTEI+EY++ DE+AVCNLASIALN Y+ P +K ++F KL +V K
Sbjct: 419 RKSNQQNLGTIKCSNLCTEIIEYSAPDEIAVCNLASIALNRYVTP-EKKFDFVKLAEVTK 477
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
++T+NLNKIIDVN+YPVEEARNSNMRHRPIG+GVQGLAD F+ MR PF E+R LNK+I
Sbjct: 478 VITRNLNKIIDVNYYPVEEARNSNMRHRPIGLGVQGLADCFMLMRYPFTSAEARDLNKRI 537
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIYY ALEASCE+A +GPY TYEGSPVS+G LQ+DMWGVTPTD DWA L++KIAKH
Sbjct: 538 FETIYYAALEASCELAELNGPYSTYEGSPVSKGQLQFDMWGVTPTDQCDWATLRKKIAKH 597
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
G+RNSLL+APMPTASTAQILGNNES EPYTSNIYSRRVLSG+FQ+VN H+L+DLVE GLW
Sbjct: 598 GIRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHMLKDLVERGLW 657
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
D MK++LI NNGSIQ+I+GIP +K+LY+TVWEI QK +++MAADRGA+IDQSQSLNI+
Sbjct: 658 TDEMKNRLIANNGSIQNIDGIPSDIKELYRTVWEISQKDIIEMAADRGAYIDQSQSLNIH 717
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKM-ANAMASKDA---R 566
MA+ +YA ++SMHF+GWK GLKTGMYYLRTKPA NA+QFT+DK + N A A
Sbjct: 718 MAKPSYAGITSMHFYGWKKGLKTGMYYLRTKPAVNAVQFTVDKNALKTNQQAETPATVAE 777
Query: 567 SQEE 570
SQ+E
Sbjct: 778 SQDE 781
Score = 792 (283.9 bits), Expect = 7.0e-147, Sum P(3) = 7.0e-147
Identities = 147/209 (70%), Positives = 178/209 (85%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
++DMWGVTPTD DWA L++KIAKHG+RNSLL+APMPTASTAQILGNNES EPYTSNIYS
Sbjct: 573 QFDMWGVTPTDQCDWATLRKKIAKHGIRNSLLMAPMPTASTAQILGNNESIEPYTSNIYS 632
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSG+FQ+VN H+L+DLVE GLW D MK++LI NNGSIQ+I+GIP +K+LY+TVWEI
Sbjct: 633 RRVLSGDFQIVNPHMLKDLVERGLWTDEMKNRLIANNGSIQNIDGIPSDIKELYRTVWEI 692
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QK +++MAADRGA+IDQSQSLNI+MA+ +YA ++SMHF+GWK GLKTGMYYLRTKPA N
Sbjct: 693 SQKDIIEMAADRGAYIDQSQSLNIHMAKPSYAGITSMHFYGWKKGLKTGMYYLRTKPAVN 752
Query: 950 AIQFTIDKTKM-ANAMASKDT---RSQEE 974
A+QFT+DK + N A SQ+E
Sbjct: 753 AVQFTVDKNALKTNQQAETPATVAESQDE 781
Score = 360 (131.8 bits), Expect = 7.0e-147, Sum P(3) = 7.0e-147
Identities = 64/88 (72%), Positives = 71/88 (80%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH DIF+F+ L+KNTG EE RARDLF LWIPD FM+RVE D +WSLMC
Sbjct: 299 RPGAFAIYLEPWHADIFEFVSLRKNTGPEEERARDLFLALWIPDLFMKRVEKDQEWSLMC 358
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEGLV 88
P C GL D WGE+F+ LY KYEAEG V
Sbjct: 359 PCECPGLDDCWGEEFEALYAKYEAEGRV 386
Score = 319 (117.4 bits), Expect = 7.0e-147, Sum P(3) = 7.0e-147
Identities = 60/92 (65%), Positives = 72/92 (78%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+GVQGLAD F+ MR PF E+R LNK+IFETIYY ALEASCE+A +GPY TYEGSPVS
Sbjct: 509 LGVQGLADCFMLMRYPFTSAEARDLNKRIFETIYYAALEASCELAELNGPYSTYEGSPVS 568
Query: 653 QGILQYDMWGVTPTDLWDWAALKVLALVYGLK 684
+G LQ+DMWGVTPTD DWA L+ +G++
Sbjct: 569 KGQLQFDMWGVTPTDQCDWATLRKKIAKHGIR 600
Score = 173 (66.0 bits), Expect = 4.8e-95, Sum P(2) = 4.8e-95
Identities = 32/63 (50%), Positives = 47/63 (74%)
Query: 708 NRKSNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFF 767
++K+N+ EV++ L+ + TG PMISD+ + II KNAD+LNSAI+YDRD++Y +F
Sbjct: 93 HKKTNKVFSEVMKTLHEFHHPHTGKHAPMISDETWAIIEKNADKLNSAIVYDRDYSYTYF 152
Query: 768 GFK 770
GFK
Sbjct: 153 GFK 155
Score = 133 (51.9 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
Identities = 32/64 (50%), Positives = 38/64 (59%)
Query: 659 DMWGVTPTDLWDW--AALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNL 716
D WG L+ A +V V KLW I+ +QIETG PY+ YKDA NRKSNQQNL
Sbjct: 367 DCWGEEFEALYAKYEAEGRVRKTVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNL 426
Query: 717 EVIE 720
I+
Sbjct: 427 GTIK 430
Score = 44 (20.5 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 631 EASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAA 673
E + A +G Q +G P L +W ++ D+ + AA
Sbjct: 660 EMKNRLIANNGSIQNIDGIPSDIKELYRTVWEISQKDIIEMAA 702
Score = 37 (18.1 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 935 LKTGMYYLRTKPAAN 949
++TG+ Y+ K AAN
Sbjct: 404 IETGLPYITYKDAAN 418
>UNIPROTKB|F5H861 [details] [associations]
symbol:RRM1 "Ribonucleoside-diphosphate reductase large
subunit" species:9606 "Homo sapiens" [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=IEA]
[GO:0017076 "purine nucleotide binding" evidence=IEA] [GO:0051290
"protein heterotetramerization" evidence=IEA] InterPro:IPR000788
InterPro:IPR013346 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
GO:GO:0006260 GO:GO:0051290 GO:GO:0017076 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 TIGRFAMs:TIGR02506 HGNC:HGNC:10451
ChiTaRS:RRM1 EMBL:AC015689 IPI:IPI01016072
ProteinModelPortal:F5H861 SMR:F5H861 Ensembl:ENST00000537197
ArrayExpress:F5H861 Bgee:F5H861 Uniprot:F5H861
Length = 454
Score = 1734 (615.5 bits), Expect = 1.3e-191, Sum P(2) = 1.3e-191
Identities = 323/457 (70%), Positives = 385/457 (84%)
Query: 137 MRRVESDAQWSLMCPNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQI 196
M+RVE++ WSLMCPN C GL + WGE+F+ LY YE +G+ + V A++LW+AI++SQ
Sbjct: 1 MKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQT 60
Query: 197 ETGTPYMLYKDACNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPA 256
ETGTPYMLYKD+CNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLAS+ALNMY+ +
Sbjct: 61 ETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYVT-S 119
Query: 257 DKTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRL 316
+ TY+F KL +V K+V +NLNKIID+N+YPV EA SN RHRPIGIGVQGLAD FI MR
Sbjct: 120 EHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRY 179
Query: 317 PFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTD 376
PF+ E++LLNKQIFETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTD
Sbjct: 180 PFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTD 239
Query: 377 LWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVV 436
LWDW LKEKIAK+G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+RRVLSGEFQ+V
Sbjct: 240 LWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIV 299
Query: 437 NHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAAD 496
N HLL+DL E GLW + MK+Q+I NGSIQ I IP LK LYKTVWEI QKTVL MAA+
Sbjct: 300 NPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAE 359
Query: 497 RGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKM 556
RGAFIDQSQSLNI++AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN IQFT++K K+
Sbjct: 360 RGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKL 419
Query: 557 ANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCI 593
+ K+ S+EE ++E+ AAM+C +N+++C+
Sbjct: 420 KD----KEKVSKEE--EEKERNTAAMVCSLENRDECL 450
Score = 841 (301.1 bits), Expect = 1.2e-134, Sum P(3) = 1.2e-134
Identities = 160/228 (70%), Positives = 190/228 (83%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW VTPTDLWDW LKEKIAK+G+RNSLLIAPMPTASTAQILGNNES EPYTSNIY+
Sbjct: 229 QYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYT 288
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQ+VN HLL+DL E GLW + MK+Q+I NGSIQ I IP LK LYKTVWEI
Sbjct: 289 RRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEI 348
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QKTVL MAA+RGAFIDQSQSLNI++AE NY K++SMHF+GWK GLKTGMYYLRT+PAAN
Sbjct: 349 SQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAAN 408
Query: 950 AIQFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICRRDNKEDCL 997
IQFT++K K+ + K+ S+EE ++E+ AAM+C +N+++CL
Sbjct: 409 PIQFTLNKEKLKD----KEKVSKEE--EEKERNTAAMVCSLENRDECL 450
Score = 369 (135.0 bits), Expect = 1.2e-134, Sum P(3) = 1.2e-134
Identities = 73/137 (53%), Positives = 90/137 (65%)
Query: 548 QFTIDKTKMANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCIGVQGLADLFIQMRL 607
+ T D K+A + I + A + + ++ IGVQGLAD FI MR
Sbjct: 120 EHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRY 179
Query: 608 PFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTD 667
PF+ E++LLNKQIFETIYYGALEASC++A GPY+TYEGSPVS+GILQYDMW VTPTD
Sbjct: 180 PFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTD 239
Query: 668 LWDWAALKVLALVYGLK 684
LWDW LK YG++
Sbjct: 240 LWDWKVLKEKIAKYGIR 256
Score = 164 (62.8 bits), Expect = 4.5e-113, Sum P(3) = 4.5e-113
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 675 KVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
+V +V +LW+AI++SQ ETGTPYMLYKD+CNRKSNQQNL I+
Sbjct: 41 RVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIK 86
Score = 145 (56.1 bits), Expect = 1.3e-191, Sum P(2) = 1.3e-191
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 47 MRRVESDAQWSLMCPNACRGLSDSWGEKFDDLYKKYEAEGLV 88
M+RVE++ WSLMCPN C GL + WGE+F+ LY YE +G V
Sbjct: 1 MKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRV 42
>POMBASE|SPAC1F7.05 [details] [associations]
symbol:cdc22 "ribonucleoside reductase large subunit
Cdc22" species:4896 "Schizosaccharomyces pombe" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0006213 "pyrimidine nucleoside metabolic
process" evidence=IC] [GO:0007090 "regulation of S phase of mitotic
cell cycle" evidence=IMP] [GO:0009212 "pyrimidine
deoxyribonucleoside triphosphate biosynthetic process" evidence=IC]
[GO:0009216 "purine deoxyribonucleoside triphosphate biosynthetic
process" evidence=IC] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=ISS] [GO:0042278 "purine nucleoside metabolic
process" evidence=IC] [GO:0090329 "regulation of DNA-dependent DNA
replication" evidence=IMP] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326
PomBase:SPAC1F7.05 Pfam:PF03477 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006260 GO:GO:0007090
GO:GO:0090329 GO:GO:0006213 GO:GO:0009263 KO:K10807 GO:GO:0042278
InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 HOGENOM:HOG000057035 OMA:PQARNSN
TIGRFAMs:TIGR02506 OrthoDB:EOG480N4T EMBL:X65116 PIR:S34807
PIR:S62577 RefSeq:NP_594491.1 ProteinModelPortal:P36602 SMR:P36602
IntAct:P36602 STRING:P36602 PRIDE:P36602 EnsemblFungi:SPAC1F7.05.1
GeneID:2541695 KEGG:spo:SPAC1F7.05 NextBio:20802788 GO:GO:0009216
GO:GO:0009212 Uniprot:P36602
Length = 811
Score = 1767 (627.1 bits), Expect = 4.2e-182, P = 4.2e-182
Identities = 334/521 (64%), Positives = 408/521 (78%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFA YLEPWH D+ DFLEL+K G E+FRAR++FY LWIPD FM+RVE + QW+ C
Sbjct: 293 RPGAFAAYLEPWHADVMDFLELRKTHGNEDFRAREMFYALWIPDLFMQRVERNEQWTFFC 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN GL+D WG++F LY+KYE E + R +PA+K+W+AIL SQ+ETG P+MLYKD+CN
Sbjct: 353 PNEAPGLADVWGDEFVALYEKYEKENRGRRSLPAQKVWYAILQSQVETGNPFMLYKDSCN 412
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSNQ+N+GTI+CSNLCTEIVEY+S DEVAVCNLAS+AL +I D YNF KL DV K
Sbjct: 413 RKSNQKNVGTIRCSNLCTEIVEYSSPDEVAVCNLASVALPTFIK--DGKYNFQKLHDVVK 470
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
+VT+NLNKIIDVN+YPV EAR SNMRHRP+G+GVQGLAD F +RLPF+ ++ LN QI
Sbjct: 471 VVTRNLNKIIDVNYYPVPEARRSNMRHRPVGLGVQGLADAFFALRLPFESAGAKKLNIQI 530
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIY+ ALEASCEIA +G Y++YEGSP SQGILQYDMW V PTDLWDWA LKEKIAKH
Sbjct: 531 FETIYHAALEASCEIAQVEGTYESYEGSPASQGILQYDMWNVNPTDLWDWAELKEKIAKH 590
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
G+RNSLL+APMPTAST+QILG NE FEPYTSN+Y RRVLSGEFQ+VN LL+DLVE LW
Sbjct: 591 GIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWLLKDLVERDLW 650
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
+++MK++L++ +GSIQ I IPQ LKDLYKTVWEI QKTV+D AADRG FIDQSQSLNI+
Sbjct: 651 NEDMKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEISQKTVIDYAADRGPFIDQSQSLNIH 710
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDARSQEE 570
+ + +Y K++SMHF+GWK GLKTGMYYLRT A+ AI+FT+D A+ +++ S EE
Sbjct: 711 LKDPSYGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPV----ALRARNEESNEE 766
Query: 571 IQADQEQAMAAMICRRDNKEDCIGVQGLADLFIQMRLPFDC 611
+ + A I KE+ I + L ++ P C
Sbjct: 767 NKKPVIKNGKAEISAEPTKEE-IDIYNEKVLACSIKNPEAC 806
Score = 742 (266.3 bits), Expect = 1.7e-119, Sum P(3) = 1.7e-119
Identities = 144/226 (63%), Positives = 177/226 (78%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW V PTDLWDWA LKEKIAKHG+RNSLL+APMPTAST+QILG NE FEPYTSN+Y
Sbjct: 566 QYDMWNVNPTDLWDWAELKEKIAKHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQ 625
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQ+VN LL+DLVE LW+++MK++L++ +GSIQ I IPQ LKDLYKTVWEI
Sbjct: 626 RRVLSGEFQIVNPWLLKDLVERDLWNEDMKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEI 685
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QKTV+D AADRG FIDQSQSLNI++ + +Y K++SMHF+GWK GLKTGMYYLRT A+
Sbjct: 686 SQKTVIDYAADRGPFIDQSQSLNIHLKDPSYGKITSMHFYGWKKGLKTGMYYLRTMAASA 745
Query: 950 AIQFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICRRDNKED 995
AI+FT+D A+ +++ S EE + + A I KE+
Sbjct: 746 AIKFTVDPV----ALRARNEESNEENKKPVIKNGKAEISAEPTKEE 787
Score = 324 (119.1 bits), Expect = 8.9e-54, Sum P(2) = 8.9e-54
Identities = 69/138 (50%), Positives = 90/138 (65%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+GVQGLAD F +RLPF+ ++ LN QIFETIY+ ALEASCEIA +G Y++YEGSP S
Sbjct: 502 LGVQGLADAFFALRLPFESAGAKKLNIQIFETIYHAALEASCEIAQVEGTYESYEGSPAS 561
Query: 653 QGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETG-TPYMLYKDACNRK- 710
QGILQYDMW V PTDLWDWA LK +G++ ++L + + T T +L + C
Sbjct: 562 QGILQYDMWNVNPTDLWDWAELKEKIAKHGIRN--SLLVAPMPTASTSQILGFNECFEPY 619
Query: 711 -SNQQNLEVIEELYNMVN 727
SN V+ + +VN
Sbjct: 620 TSNMYQRRVLSGEFQIVN 637
Score = 321 (118.1 bits), Expect = 1.7e-119, Sum P(3) = 1.7e-119
Identities = 54/85 (63%), Positives = 66/85 (77%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFA YLEPWH D+ DFLEL+K G E+FRAR++FY LWIPD FM+RVE + QW+ C
Sbjct: 293 RPGAFAAYLEPWHADVMDFLELRKTHGNEDFRAREMFYALWIPDLFMQRVERNEQWTFFC 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAE 85
PN GL+D WG++F LY+KYE E
Sbjct: 353 PNEAPGLADVWGDEFVALYEKYEKE 377
Score = 181 (68.8 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 718 VIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
V+++L++ VN +T PMISDK Y+I+MK+ D L+SAIIYDRDF YNFFGFK
Sbjct: 97 VVQQLHDYVNPKTDKPAPMISDKIYDIVMKHKDELDSAIIYDRDFTYNFFGFK 149
Score = 148 (57.2 bits), Expect = 1.7e-119, Sum P(3) = 1.7e-119
Identities = 25/36 (69%), Positives = 32/36 (88%)
Query: 684 KLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVI 719
K+W+AIL SQ+ETG P+MLYKD+CNRKSNQ+N+ I
Sbjct: 388 KVWYAILQSQVETGNPFMLYKDSCNRKSNQKNVGTI 423
>UNIPROTKB|Q9UW15 [details] [associations]
symbol:rnr-1 "Ribonucleoside-diphosphate reductase large
chain" species:367110 "Neurospora crassa OR74A" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 EMBL:AABX02000008 GO:GO:0009263 KO:K10807
InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 HOGENOM:HOG000057035
TIGRFAMs:TIGR02506 EMBL:AF171697 EMBL:AL390092 PIR:T43711
RefSeq:XP_956818.1 UniGene:Ncr.20426 ProteinModelPortal:Q9UW15
SMR:Q9UW15 STRING:Q9UW15 EnsemblFungi:EFNCRT00000002608
GeneID:3872956 KEGG:ncr:NCU03539 OMA:ETIYHAS OrthoDB:EOG480N4T
Uniprot:Q9UW15
Length = 929
Score = 1766 (626.7 bits), Expect = 5.4e-182, P = 5.4e-182
Identities = 321/463 (69%), Positives = 390/463 (84%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIYLEPWH D+F+FL+L+KN GKEE RARDLF LWIPD FM+RVE + QW+LMC
Sbjct: 293 RPGAFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMC 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
P+ C GL+D +G++F+ LY+KYE EGK + V A+KLW+AIL++Q ETG P+MLYKDACN
Sbjct: 353 PHECPGLADVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACN 412
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSNQ+NLGTI+ SNLCTEI+EY++ DEVAVCNLAS+AL+ +I+ + +Y+F KL +V +
Sbjct: 413 RKSNQKNLGTIRSSNLCTEIIEYSAPDEVAVCNLASLALSAFIDYENASYDFKKLHEVTQ 472
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
+V +NLNKIID+N YPV+EA NSNMRHRPIG+GVQGLAD F+ +R+PFD + + LN QI
Sbjct: 473 VVVRNLNKIIDINHYPVKEAHNSNMRHRPIGVGVQGLADAFLALRMPFDSDAASKLNIQI 532
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIY+ AL ASC++A GPY TYEGSPVSQGILQYDMW VTPT+LWDW ALK I K+
Sbjct: 533 FETIYHAALTASCQLAKEQGPYATYEGSPVSQGILQYDMWNVTPTNLWDWTALKADIKKY 592
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
GVRNSLL+APMPTAST+QILGNNE FEPYTSNIY RRVL+GEFQVVN LLRDLVE+GLW
Sbjct: 593 GVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWLLRDLVEMGLW 652
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
D MK+++I GSIQ+I+ IP +K LYKTVWEI Q+T++ MAADRGAFIDQSQSLNI+
Sbjct: 653 SDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAFIDQSQSLNIH 712
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDK 553
M E K++SMHF GWK+GLKTGMYYLRT+ AA IQFT+D+
Sbjct: 713 MREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQ 755
Score = 733 (263.1 bits), Expect = 8.2e-122, Sum P(3) = 8.2e-122
Identities = 136/188 (72%), Positives = 159/188 (84%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW VTPT+LWDW ALK I K+GVRNSLL+APMPTAST+QILGNNE FEPYTSNIY
Sbjct: 568 QYDMWNVTPTNLWDWTALKADIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQ 627
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVL+GEFQVVN LLRDLVE+GLW D MK+++I GSIQ+I+ IP +K LYKTVWEI
Sbjct: 628 RRVLAGEFQVVNPWLLRDLVEMGLWSDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEI 687
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
Q+T++ MAADRGAFIDQSQSLNI+M E K++SMHF GWK+GLKTGMYYLRT+ AA
Sbjct: 688 SQRTIVKMAADRGAFIDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQ 747
Query: 950 AIQFTIDK 957
IQFT+D+
Sbjct: 748 PIQFTVDQ 755
Score = 348 (127.6 bits), Expect = 8.2e-122, Sum P(3) = 8.2e-122
Identities = 59/86 (68%), Positives = 73/86 (84%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH D+F+FL+L+KN GKEE RARDLF LWIPD FM+RVE + QW+LMC
Sbjct: 293 RPGAFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMC 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEG 86
P+ C GL+D +G++F+ LY+KYE EG
Sbjct: 353 PHECPGLADVYGDEFEALYEKYEKEG 378
Score = 335 (123.0 bits), Expect = 1.2e-57, Sum P(2) = 1.2e-57
Identities = 70/138 (50%), Positives = 91/138 (65%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+GVQGLAD F+ +R+PFD + + LN QIFETIY+ AL ASC++A GPY TYEGSPVS
Sbjct: 504 VGVQGLADAFLALRMPFDSDAASKLNIQIFETIYHAALTASCQLAKEQGPYATYEGSPVS 563
Query: 653 QGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETG-TPYMLYKDACNRK- 710
QGILQYDMW VTPT+LWDW ALK YG++ ++L + + T T +L + C
Sbjct: 564 QGILQYDMWNVTPTNLWDWTALKADIKKYGVRN--SLLLAPMPTASTSQILGNNECFEPY 621
Query: 711 -SNQQNLEVIEELYNMVN 727
SN V+ + +VN
Sbjct: 622 TSNIYQRRVLAGEFQVVN 639
Score = 183 (69.5 bits), Expect = 7.1e-90, Sum P(2) = 7.1e-90
Identities = 49/120 (40%), Positives = 69/120 (57%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
++Q ++ GVT L D AA + A + +AIL ++I L+K +K
Sbjct: 39 ITQKVISGVYGGVTTAQLDDLAA-ETAAYMTVTHPDYAILAARIAVSN---LHKQT--KK 92
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
Q +L VI ELYN VN TG +PMI+ YE +M++ D +SAI+YDRDFNY +FGFK
Sbjct: 93 --QWSL-VISELYNYVNPRTGKHSPMIAKDVYECVMRHKDEFDSAIVYDRDFNYQYFGFK 149
Score = 152 (58.6 bits), Expect = 8.2e-122, Sum P(3) = 8.2e-122
Identities = 27/36 (75%), Positives = 32/36 (88%)
Query: 684 KLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVI 719
KLW+AIL++Q ETG P+MLYKDACNRKSNQ+NL I
Sbjct: 388 KLWYAILEAQTETGNPFMLYKDACNRKSNQKNLGTI 423
>TAIR|locus:2052469 [details] [associations]
symbol:RNR1 "ribonucleotide reductase 1" species:3702
"Arabidopsis thaliana" [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA;ISS]
[GO:0006260 "DNA replication" evidence=IEA;ISS;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046686 "response
to cadmium ion" evidence=IEP] [GO:0009202 "deoxyribonucleoside
triphosphate biosynthetic process" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0007010 "cytoskeleton organization"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477
GO:GO:0005524 GO:GO:0046686 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006260 EMBL:AC007019 GO:GO:0009263 KO:K10807
InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 GO:GO:0009202 EMBL:AF092841
EMBL:AY035080 EMBL:BT008573 IPI:IPI00525243 PIR:B84605 PIR:T51813
RefSeq:NP_179770.1 UniGene:At.115 ProteinModelPortal:Q9SJ20
SMR:Q9SJ20 STRING:Q9SJ20 PaxDb:Q9SJ20 PRIDE:Q9SJ20
EnsemblPlants:AT2G21790.1 GeneID:816715 KEGG:ath:AT2G21790
GeneFarm:2079 TAIR:At2g21790 HOGENOM:HOG000057035 InParanoid:Q9SJ20
OMA:PQARNSN PhylomeDB:Q9SJ20 ProtClustDB:PLN02437
Genevestigator:Q9SJ20 GermOnline:AT2G21790 TIGRFAMs:TIGR02506
Uniprot:Q9SJ20
Length = 816
Score = 1121 (399.7 bits), Expect = 2.1e-178, Sum P(2) = 2.1e-178
Identities = 213/341 (62%), Positives = 267/341 (78%)
Query: 253 INPADKTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFI 312
++ ++ ++F KL +V VT NLNKIIDVN+YPVE A+ SNMRHRPIGIGVQGLAD FI
Sbjct: 473 LDSKNRYFDFEKLAEVTATVTVNLNKIIDVNYYPVETAKTSNMRHRPIGIGVQGLADAFI 532
Query: 313 QMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGV 372
+ +PFD E++ LNK IFETIYY AL+AS E+AAR GPY+TY GSPVS+GILQ DMW V
Sbjct: 533 LLGMPFDSPEAQQLNKDIFETIYYHALKASTELAARLGPYETYAGSPVSKGILQPDMWNV 592
Query: 373 TPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGE 432
P+D WDWA L++ I+K+GVRNSLL+APMPTAST+QILGNNE FEPYTSNIYSRRVLSGE
Sbjct: 593 IPSDRWDWAVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
Query: 433 FQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLD 492
F VVN HLL DL ++GLW +K++LI NGSI ++ IP LK +Y+TVWEI Q+TV+D
Sbjct: 653 FVVVNKHLLHDLTDMGLWTPTLKNKLINENGSIVNVAEIPDDLKAIYRTVWEIKQRTVVD 712
Query: 493 MAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTID 552
MAADRG +IDQSQSLNI+M + N+AK++S+HF+ WK GLKTGMYYLR++ AA+AI+FT+D
Sbjct: 713 MAADRGCYIDQSQSLNIHMDKPNFAKLTSLHFYTWKKGLKTGMYYLRSRAAADAIKFTVD 772
Query: 553 KTKMANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCI 593
T M S +E + D E +A M+C N E+C+
Sbjct: 773 -TAMLKEKPSVAEGDKEVEEEDNETKLAQMVCSLTNPEECL 812
Score = 740 (265.6 bits), Expect = 4.0e-138, Sum P(2) = 4.0e-138
Identities = 139/226 (61%), Positives = 175/226 (77%)
Query: 772 DMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRR 831
DMW V P+D WDWA L++ I+K+GVRNSLL+APMPTAST+QILGNNE FEPYTSNIYSRR
Sbjct: 588 DMWNVIPSDRWDWAVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
Query: 832 VLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQ 891
VLSGEF VVN HLL DL ++GLW +K++LI NGSI ++ IP LK +Y+TVWEI Q
Sbjct: 648 VLSGEFVVVNKHLLHDLTDMGLWTPTLKNKLINENGSIVNVAEIPDDLKAIYRTVWEIKQ 707
Query: 892 KTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAI 951
+TV+DMAADRG +IDQSQSLNI+M + N+AK++S+HF+ WK GLKTGMYYLR++ AA+AI
Sbjct: 708 RTVVDMAADRGCYIDQSQSLNIHMDKPNFAKLTSLHFYTWKKGLKTGMYYLRSRAAADAI 767
Query: 952 QFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICRRDNKEDCL 997
+FT+D T M S +E + D E +A M+C N E+CL
Sbjct: 768 KFTVD-TAMLKEKPSVAEGDKEVEEEDNETKLAQMVCSLTNPEECL 812
Score = 633 (227.9 bits), Expect = 2.1e-178, Sum P(2) = 2.1e-178
Identities = 112/163 (68%), Positives = 134/163 (82%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GAFA+YLEPWH D+++FLEL+KN GKEE RARDLFY LW+PD FM RV+++ QWSL C
Sbjct: 293 RKGAFAVYLEPWHADVYEFLELRKNHGKEEHRARDLFYALWLPDLFMERVQNNGQWSLFC 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN GL+D WG +F+ LY KYE EGK + V A++LW+ IL SQ+ETGTPYML+KD+CN
Sbjct: 353 PNEAPGLADCWGAEFETLYTKYEREGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCN 412
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYI 253
RKSNQQNLGTIK SNLCTEI+EYTS E AVCNLASIAL ++
Sbjct: 413 RKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFV 455
Score = 341 (125.1 bits), Expect = 1.6e-147, Sum P(2) = 1.6e-147
Identities = 57/86 (66%), Positives = 69/86 (80%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GAFA+YLEPWH D+++FLEL+KN GKEE RARDLFY LW+PD FM RV+++ QWSL C
Sbjct: 293 RKGAFAVYLEPWHADVYEFLELRKNHGKEEHRARDLFYALWLPDLFMERVQNNGQWSLFC 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEG 86
PN GL+D WG +F+ LY KYE EG
Sbjct: 353 PNEAPGLADCWGAEFETLYTKYEREG 378
Score = 322 (118.4 bits), Expect = 9.4e-93, Sum P(2) = 9.4e-93
Identities = 85/218 (38%), Positives = 120/218 (55%)
Query: 552 DKTKMANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCIGVQGLADLFIQMRLPFDC 611
D K+A A+ + I + A ++ IGVQGLAD FI + +PFD
Sbjct: 481 DFEKLAEVTATVTVNLNKIIDVNYYPVETAKTSNMRHRPIGIGVQGLADAFILLGMPFDS 540
Query: 612 NESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDW 671
E++ LNK IFETIYY AL+AS E+AAR GPY+TY GSPVS+GILQ DMW V P+D WDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASTELAARLGPYETYAGSPVSKGILQPDMWNVIPSDRWDW 600
Query: 672 AALKVLALVYGLKLWFAILDSQIETG-TPYMLYKDACNRK--SNQQNLEVIEELYNMVNK 728
A L+ + G++ ++L + + T T +L + C SN + V+ + +VNK
Sbjct: 601 AVLRDMISKNGVRN--SLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
Query: 729 -------ETGTRTPMISDKHYEIIMKNADRLNSAIIYD 759
+ G TP + +K +I +N +N A I D
Sbjct: 659 HLLHDLTDMGLWTPTLKNK---LINENGSIVNVAEIPD 693
Score = 162 (62.1 bits), Expect = 2.1e-88, Sum P(2) = 2.1e-88
Identities = 29/54 (53%), Positives = 43/54 (79%)
Query: 717 EVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
E I++++ VN +G ++P+I+D +EIIM+NA RL+S IIYDRDF Y++FGFK
Sbjct: 96 ETIKDMFYHVNDRSGLKSPLIADDVFEIIMQNAARLDSEIIYDRDFEYDYFGFK 149
Score = 159 (61.0 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 33/64 (51%), Positives = 41/64 (64%)
Query: 659 DMWGVTPTDLWDWAAL--KVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNL 716
D WG L+ K +V +LW+ IL SQ+ETGTPYML+KD+CNRKSNQQNL
Sbjct: 361 DCWGAEFETLYTKYEREGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCNRKSNQQNL 420
Query: 717 EVIE 720
I+
Sbjct: 421 GTIK 424
Score = 39 (18.8 bits), Expect = 6.4e-63, Sum P(2) = 6.4e-63
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 851 LGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAF 904
+G+ + D I+ G D Q KD+++T++ K ++AA G +
Sbjct: 520 IGIGVQGLADAFILL-GMPFDSPEAQQLNKDIFETIYYHALKASTELAARLGPY 572
>ASPGD|ASPL0000074083 [details] [associations]
symbol:AN4380 species:162425 "Emericella nidulans"
[GO:0043173 "nucleotide salvage" evidence=RCA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;RCA] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=IEA]
[GO:0090329 "regulation of DNA-dependent DNA replication"
evidence=IEA] [GO:0007090 "regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524 GO:GO:0006260
EMBL:BN001303 EMBL:AACD01000076 KO:K10807 InterPro:IPR005144
PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 HOGENOM:HOG000057035 TIGRFAMs:TIGR02506 OMA:YKYGVKT
OrthoDB:EOG480N4T RefSeq:XP_661984.1 ProteinModelPortal:Q5B500
SMR:Q5B500 STRING:Q5B500 EnsemblFungi:CADANIAT00006078
GeneID:2872173 KEGG:ani:AN4380.2 Uniprot:Q5B500
Length = 865
Score = 1711 (607.4 bits), Expect = 2.7e-178, Sum P(2) = 2.7e-178
Identities = 312/480 (65%), Positives = 392/480 (81%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIYLEPWH D+F+FL+L+KN GKEE RARDLFY LW PD FM+RVE++ W+L C
Sbjct: 307 RPGAFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFC 366
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN GL+D +G++FD LY++YE EG+ R + A+KLW+AIL++Q ETG P+MLYKDACN
Sbjct: 367 PNEAPGLADVYGDEFDALYEQYEKEGRGRRTIKAQKLWYAILEAQTETGNPFMLYKDACN 426
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
+KSNQ+NLGTI+ SNLCTEI+EYT+ DEVAVCNLAS+AL +++ + Y+F KL +V +
Sbjct: 427 KKSNQKNLGTIRSSNLCTEIIEYTAPDEVAVCNLASLALPTFVDASRGEYDFGKLHEVVQ 486
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
++ +NLNKIID+N+YPV EA+ SN RHRPI +GV GLAD F+ +RLPFD E++ LN QI
Sbjct: 487 VLVRNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDSAEAKQLNIQI 546
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIY+ AL AS +A DGPY++YEGSPVSQGILQYDMW TPTDLWDW ALK KIA+
Sbjct: 547 FETIYHAALTASSNLAKEDGPYESYEGSPVSQGILQYDMWERTPTDLWDWDALKAKIAQT 606
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
GVRNSLL+APMPTAST+QILG NE FEPYTSNIYSRRVL+GEFQVVN LL+DLV+LGLW
Sbjct: 607 GVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVDLGLW 666
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
DNMK+++I GS+Q+I IP +K LYKTVWEI Q+ +L+MAADRGA+IDQSQSLNI+
Sbjct: 667 SDNMKNRIIAEGGSVQNIPNIPDDIKALYKTVWEISQRRILEMAADRGAYIDQSQSLNIH 726
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKT--KMANAMASKDARSQ 568
+ E K++SMHF GWK+GLKTGMYYLRT A+ IQFT+D+ K+A+ ++ ++ +
Sbjct: 727 LKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLKVADTNVARTSKKR 786
Score = 716 (257.1 bits), Expect = 5.8e-122, Sum P(4) = 5.8e-122
Identities = 135/205 (65%), Positives = 167/205 (81%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW TPTDLWDW ALK KIA+ GVRNSLL+APMPTAST+QILG NE FEPYTSNIYS
Sbjct: 582 QYDMWERTPTDLWDWDALKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYS 641
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVL+GEFQVVN LL+DLV+LGLW DNMK+++I GS+Q+I IP +K LYKTVWEI
Sbjct: 642 RRVLAGEFQVVNPWLLKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPDDIKALYKTVWEI 701
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
Q+ +L+MAADRGA+IDQSQSLNI++ E K++SMHF GWK+GLKTGMYYLRT A+
Sbjct: 702 SQRRILEMAADRGAYIDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASA 761
Query: 950 AIQFTIDKT--KMANAMASKDTRSQ 972
IQFT+D+ K+A+ ++ ++ +
Sbjct: 762 PIQFTVDQEQLKVADTNVARTSKKR 786
Score = 338 (124.0 bits), Expect = 5.8e-122, Sum P(4) = 5.8e-122
Identities = 57/86 (66%), Positives = 71/86 (82%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH D+F+FL+L+KN GKEE RARDLFY LW PD FM+RVE++ W+L C
Sbjct: 307 RPGAFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFC 366
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEG 86
PN GL+D +G++FD LY++YE EG
Sbjct: 367 PNEAPGLADVYGDEFDALYEQYEKEG 392
Score = 317 (116.6 bits), Expect = 3.4e-54, Sum P(3) = 3.4e-54
Identities = 69/138 (50%), Positives = 90/138 (65%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+GV GLAD F+ +RLPFD E++ LN QIFETIY+ AL AS +A DGPY++YEGSPVS
Sbjct: 518 LGVNGLADAFLALRLPFDSAEAKQLNIQIFETIYHAALTASSNLAKEDGPYESYEGSPVS 577
Query: 653 QGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETG-TPYMLYKDACNRK- 710
QGILQYDMW TPTDLWDW ALK G++ ++L + + T T +L + C
Sbjct: 578 QGILQYDMWERTPTDLWDWDALKAKIAQTGVRN--SLLVAPMPTASTSQILGFNECFEPY 635
Query: 711 -SNQQNLEVIEELYNMVN 727
SN + V+ + +VN
Sbjct: 636 TSNIYSRRVLAGEFQVVN 653
Score = 192 (72.6 bits), Expect = 4.8e-92, Sum P(3) = 4.8e-92
Identities = 51/124 (41%), Positives = 74/124 (59%)
Query: 647 EGSPVSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDA 706
+ + ++Q ++ GVT +L D A + A + +AIL ++I L+K
Sbjct: 49 DAAAITQKVISGVYQGVTTVEL-DNLAAETAAYMTVTHPDYAILAARIAVSN---LHKQT 104
Query: 707 CNRKSNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNF 766
+K Q +L VI +LY+ VN + PMIS + YEI+MK+A+ LNSAI+YDRDFNYNF
Sbjct: 105 --KK--QFSL-VISDLYHYVNPKNKKPAPMISKETYEIVMKHAEELNSAIVYDRDFNYNF 159
Query: 767 FGFK 770
FGFK
Sbjct: 160 FGFK 163
Score = 149 (57.5 bits), Expect = 5.8e-122, Sum P(4) = 5.8e-122
Identities = 26/36 (72%), Positives = 32/36 (88%)
Query: 684 KLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVI 719
KLW+AIL++Q ETG P+MLYKDACN+KSNQ+NL I
Sbjct: 402 KLWYAILEAQTETGNPFMLYKDACNKKSNQKNLGTI 437
Score = 55 (24.4 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 33/139 (23%), Positives = 58/139 (41%)
Query: 474 KLKDLYKTVWEIPQKTVL----DMAADRGA-F-IDQSQSLNIYMAEINYAKMSSMHFHGW 527
K+ ++ W++ KT + MAA F +DQ Q + +A+ N A+ S G
Sbjct: 734 KITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQ---LKVADTNVARTSKKRA-G- 788
Query: 528 KLGLKTGMYYLRTKPAANAIQFTIDK-----TKMANAMASKDARSQEEIQADQEQA---- 578
G+ T Y + A + T ++ A++ D +E+ + + +A
Sbjct: 789 --GIATTAYSAVPRAPAGQVSGTSQNATNGISREADSSGEVDTSDEEKKEGEPSEADIYS 846
Query: 579 MAAMICRRDNKEDCIGVQG 597
+ C +NKE CI QG
Sbjct: 847 QKVLQCSIENKEACIMCQG 865
Score = 42 (19.8 bits), Expect = 2.7e-178, Sum P(2) = 2.7e-178
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 954 TIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICR 989
T D+ K + D SQ+ +Q E A ++C+
Sbjct: 829 TSDEEKKEGEPSEADIYSQKVLQCSIENKEACIMCQ 864
Score = 37 (18.1 bits), Expect = 9.2e-178, Sum P(2) = 9.2e-178
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 821 EPYTSNIYSRRVL 833
EP ++IYS++VL
Sbjct: 838 EPSEADIYSQKVL 850
Score = 37 (18.1 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 417 EPYTSNIYSRRVL 429
EP ++IYS++VL
Sbjct: 838 EPSEADIYSQKVL 850
>UNIPROTKB|P50648 [details] [associations]
symbol:RNR1 "Ribonucleoside-diphosphate reductase large
subunit" species:57267 "Plasmodium falciparum Dd2" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0009263 InterPro:IPR005144 PROSITE:PS51161
eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 EMBL:U01323 ProteinModelPortal:P50648 SMR:P50648
Uniprot:P50648
Length = 806
Score = 1725 (612.3 bits), Expect = 1.2e-177, P = 1.2e-177
Identities = 322/516 (62%), Positives = 401/516 (77%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R G+FA+Y+EPWH DIF+FL+L+KN GKEE RARDLFY +W+PD FM+RV+ + W+LMC
Sbjct: 291 RKGSFAVYIEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMC 350
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN C GLS++WGE+F+ LY KYE E + V A+ LWFAIL SQIETG PYMLYKD+CN
Sbjct: 351 PNECPGLSETWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCN 410
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
KSNQ+NLGTIKCSNLC EI+EYTS DEVAVCNLASIAL +++ K +NF KL ++ K
Sbjct: 411 AKSNQKNLGTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFVDLEKKEFNFKKLYEITK 470
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
I+T+NL+KII+ N+YPV+EA+ SN RHRPIGIGVQGLAD F+ +R P++ + ++ LNK+I
Sbjct: 471 IITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYPYESDAAKELNKRI 530
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGV-TPTDLWDWAALKEKIAK 389
FET+YY ALE S E+A+ GPY++Y+GSP SQGILQ+DMW WDW LK KI K
Sbjct: 531 FETMYYAALEMSVELASIHGPYESYQGSPASQGILQFDMWNAKVDNKYWDWDELKAKIRK 590
Query: 390 HGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGL 449
HG+RNSLL+APMPTAST+QILGNNESFEPYTSNIY RRVLSGEF VVN HLL+DL + GL
Sbjct: 591 HGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPHLLKDLFDRGL 650
Query: 450 WDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNI 509
WD++MK QLI +NGSIQ I IP LK+LYKTVWEI QK ++DMAADRG FIDQSQSLNI
Sbjct: 651 WDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQKNIIDMAADRGIFIDQSQSLNI 710
Query: 510 YMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDARSQE 569
Y+ + +AK+SSMHF+GW+ GLKTG YYLRT+ A +AI+FT+D NA+ K+A +
Sbjct: 711 YIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTHVAKNAVKLKNADGVQ 770
Query: 570 ---EIQADQ---EQAMAAMIC--RRDNKEDCIGVQG 597
E+ + E + +C RR+N E C+ G
Sbjct: 771 ITREVSRETISTESTVTQNVCPLRRNNDEQCLMCSG 806
Score = 727 (261.0 bits), Expect = 1.2e-132, Sum P(3) = 1.2e-132
Identities = 144/237 (60%), Positives = 172/237 (72%)
Query: 770 KYDMWGV-TPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIY 828
++DMW WDW LK KI KHG+RNSLL+APMPTAST+QILGNNESFEPYTSNIY
Sbjct: 566 QFDMWNAKVDNKYWDWDELKAKIRKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIY 625
Query: 829 SRRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWE 888
RRVLSGEF VVN HLL+DL + GLWD++MK QLI +NGSIQ I IP LK+LYKTVWE
Sbjct: 626 YRRVLSGEFFVVNPHLLKDLFDRGLWDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWE 685
Query: 889 IPQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAA 948
I QK ++DMAADRG FIDQSQSLNIY+ + +AK+SSMHF+GW+ GLKTG YYLRT+ A
Sbjct: 686 IKQKNIIDMAADRGIFIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAAT 745
Query: 949 NAIQFTIDK------TKMANAMASKDTRSQEEIQADQEQAMAAMIC--RRDNKEDCL 997
+AI+FT+D K+ NA + TR E + +C RR+N E CL
Sbjct: 746 DAIKFTVDTHVAKNAVKLKNADGVQITREVSRETISTESTVTQNVCPLRRNNDEQCL 802
Score = 344 (126.2 bits), Expect = 1.2e-132, Sum P(3) = 1.2e-132
Identities = 55/87 (63%), Positives = 72/87 (82%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R G+FA+Y+EPWH DIF+FL+L+KN GKEE RARDLFY +W+PD FM+RV+ + W+LMC
Sbjct: 291 RKGSFAVYIEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMC 350
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEGL 87
PN C GLS++WGE+F+ LY KYE E +
Sbjct: 351 PNECPGLSETWGEEFEKLYTKYEEENM 377
Score = 265 (98.3 bits), Expect = 1.2e-132, Sum P(3) = 1.2e-132
Identities = 49/93 (52%), Positives = 66/93 (70%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
IGVQGLAD F+ +R P++ + ++ LNK+IFET+YY ALE S E+A+ GPY++Y+GSP S
Sbjct: 502 IGVQGLADTFMLLRYPYESDAAKELNKRIFETMYYAALEMSVELASIHGPYESYQGSPAS 561
Query: 653 QGILQYDMWGV-TPTDLWDWAALKVLALVYGLK 684
QGILQ+DMW WDW LK +GL+
Sbjct: 562 QGILQFDMWNAKVDNKYWDWDELKAKIRKHGLR 594
Score = 152 (58.6 bits), Expect = 9.3e-121, Sum P(3) = 9.3e-121
Identities = 28/36 (77%), Positives = 31/36 (86%)
Query: 685 LWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
LWFAIL SQIETG PYMLYKD+CN KSNQ+NL I+
Sbjct: 387 LWFAILQSQIETGVPYMLYKDSCNAKSNQKNLGTIK 422
Score = 134 (52.2 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 40/130 (30%), Positives = 66/130 (50%)
Query: 641 GPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPY 700
G ++ + + V+QG++ G+ +L D A + A + F+IL ++I T
Sbjct: 28 GLHELVDPARVTQGVINGMYSGIKTCEL-DELAAQTCAYMATTHPDFSILAARITT---- 82
Query: 701 MLYKDACNRKSNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDR 760
D ++ ++ EV E LY + G +IS + Y+ I+ + DRLN I Y R
Sbjct: 83 ----DNLHKNTSDDVAEVAEALYTYKDVR-GRPASLISKEVYDFILLHKDRLNKEIDYTR 137
Query: 761 DFNYNFFGFK 770
DFNY++FGFK
Sbjct: 138 DFNYDYFGFK 147
Score = 44 (20.5 bits), Expect = 4.4e-101, Sum P(3) = 4.4e-101
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 10 EPWHGDIFDFLELK---KNTGKEEFRARDLFYGL 40
E W G+ F+ L K +N GK+ A+DL++ +
Sbjct: 359 ETW-GEEFEKLYTKYEEENMGKKTVLAQDLWFAI 391
>UNIPROTKB|E1C4Q0 [details] [associations]
symbol:E1C4Q0 "Ribonucleoside-diphosphate reductase"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0051290 GO:GO:0009263 InterPro:IPR005144
PROSITE:PS51161 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
OMA:PQARNSN TIGRFAMs:TIGR02506 GeneTree:ENSGT00390000001372
EMBL:AADN02055234 EMBL:AADN02055235 EMBL:AADN02055236
IPI:IPI00580561 Ensembl:ENSGALT00000028034 Uniprot:E1C4Q0
Length = 784
Score = 1722 (611.2 bits), Expect = 2.5e-177, P = 2.5e-177
Identities = 328/503 (65%), Positives = 398/503 (79%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN C GL + WGE+F+ LY+ YE +G+ R V A++LW+AI++SQ ETGTPYMLYKD+CN
Sbjct: 353 PNECPGLDEVWGEEFEKLYESYEKQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDSCN 412
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMY+ ++ TY+F KL +V K
Sbjct: 413 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYVT-SEHTYDFKKLAEVTK 471
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
++ +NLNKIID+N+YPV EA SN RHRPIGIGVQGLAD FI MR PF+ E++ LN+QI
Sbjct: 472 VIVRNLNKIIDINYYPVPEAERSNRRHRPIGIGVQGLADAFILMRFPFESPEAQRLNQQI 531
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKH 390
FETIYYGALEASCE+A + GPY+TYEGSPVS+GILQYDMW VTP+DLWDW ALKEKIA
Sbjct: 532 FETIYYGALEASCELAEQQGPYETYEGSPVSKGILQYDMWNVTPSDLWDWKALKEKIANG 591
Query: 391 GVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLW 450
+ L + +L + E S+++ EF VVN HLL+DL E GLW
Sbjct: 592 WLSLFLWLHTGCAHPLGSVLTDFCVCELRISDLFL------EFHVVNPHLLKDLTERGLW 645
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIY 510
++ MK+Q+I +NGSIQ+I IP LK LYKTVWEI QKTVL MAADRGAFIDQSQSLNI+
Sbjct: 646 NEEMKNQIIAHNGSIQNISEIPADLKQLYKTVWEISQKTVLKMAADRGAFIDQSQSLNIH 705
Query: 511 MAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDARSQEE 570
+AE NY K++SMHF+GWK GLKTGMYYLRTKPAAN IQFT++K K+ ++ S+EE
Sbjct: 706 IAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLRE----REKASEEE 761
Query: 571 IQADQEQAMAAMICRRDNKEDCI 593
+E+ AAM+C +N+++C+
Sbjct: 762 ----KERNKAAMVCSLENRDECM 780
Score = 606 (218.4 bits), Expect = 5.0e-129, Sum P(3) = 5.0e-129
Identities = 125/228 (54%), Positives = 160/228 (70%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
+YDMW VTP+DLWDW ALKEKIA + L + +L + E S+++
Sbjct: 567 QYDMWNVTPSDLWDWKALKEKIANGWLSLFLWLHTGCAHPLGSVLTDFCVCELRISDLFL 626
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
EF VVN HLL+DL E GLW++ MK+Q+I +NGSIQ+I IP LK LYKTVWEI
Sbjct: 627 ------EFHVVNPHLLKDLTERGLWNEEMKNQIIAHNGSIQNISEIPADLKQLYKTVWEI 680
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QKTVL MAADRGAFIDQSQSLNI++AE NY K++SMHF+GWK GLKTGMYYLRTKPAAN
Sbjct: 681 SQKTVLKMAADRGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAAN 740
Query: 950 AIQFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMICRRDNKEDCL 997
IQFT++K K+ ++ S+EE +E+ AAM+C +N+++C+
Sbjct: 741 PIQFTLNKEKLRE----REKASEEE----KERNKAAMVCSLENRDECM 780
Score = 362 (132.5 bits), Expect = 5.0e-129, Sum P(3) = 5.0e-129
Identities = 63/88 (71%), Positives = 74/88 (84%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIYLEPWH DIF+FL+LKKNTGKEE RARDLF+ LWIPD FM+RVE++ WSLMC
Sbjct: 293 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEGLV 88
PN C GL + WGE+F+ LY+ YE +G V
Sbjct: 353 PNECPGLDEVWGEEFEKLYESYEKQGRV 380
Score = 354 (129.7 bits), Expect = 5.0e-129, Sum P(3) = 5.0e-129
Identities = 64/83 (77%), Positives = 73/83 (87%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
IGVQGLAD FI MR PF+ E++ LN+QIFETIYYGALEASCE+A + GPY+TYEGSPVS
Sbjct: 503 IGVQGLADAFILMRFPFESPEAQRLNQQIFETIYYGALEASCELAEQQGPYETYEGSPVS 562
Query: 653 QGILQYDMWGVTPTDLWDWAALK 675
+GILQYDMW VTP+DLWDW ALK
Sbjct: 563 KGILQYDMWNVTPSDLWDWKALK 585
Score = 184 (69.8 bits), Expect = 3.8e-75, Sum P(2) = 3.8e-75
Identities = 46/120 (38%), Positives = 70/120 (58%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
++ ++Q GVT +L D A + A + +AIL ++I L+K+
Sbjct: 39 ITMKVIQGLYSGVTTVEL-DTLAAETAATLTTKHPDYAILAARIAVSN---LHKETKKVF 94
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
S +V+++LYN +N G +PMIS + +I++ N DRLNSAIIYDRDF+YN+FGFK
Sbjct: 95 S-----DVMDDLYNYINPHNGKHSPMISKETLDIVLANKDRLNSAIIYDRDFSYNYFGFK 149
Score = 164 (62.8 bits), Expect = 5.0e-109, Sum P(3) = 5.0e-109
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 675 KVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
+V +V +LW+AI++SQ ETGTPYMLYKD+CNRKSNQQNL I+
Sbjct: 379 RVRRVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIK 424
>UNIPROTKB|O61065 [details] [associations]
symbol:RNR1 "Ribonucleoside-diphosphate reductase large
chain" species:5807 "Cryptosporidium parvum" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0009263 InterPro:IPR005144 PROSITE:PS51161
eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 EMBL:AF043243 ProteinModelPortal:O61065
SMR:O61065 STRING:O61065 Uniprot:O61065
Length = 803
Score = 1715 (608.8 bits), Expect = 1.4e-176, P = 1.4e-176
Identities = 311/504 (61%), Positives = 398/504 (78%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA AIYLEPWH D+ +F+E++KN GKEE R RDLF LW+PD FM RVE D W+LMC
Sbjct: 291 RKGAIAIYLEPWHVDVVEFIEIRKNHGKEEMRCRDLFPALWVPDLFMERVEKDQDWTLMC 350
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
P+ CRGL D WG+ F LY++YE +G+ + + A+KLWF IL +QIETGTP++ YKDA N
Sbjct: 351 PDECRGLQDVWGDDFKKLYEEYEKQGRGRKTMKAQKLWFLILQAQIETGTPFICYKDAAN 410
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
KSNQ+NLGTI SNLCTEI+EYTS DEVAVCNLASI L +++ +KT++F KLK+V K
Sbjct: 411 SKSNQKNLGTIVSSNLCTEIIEYTSTDEVAVCNLASIGLPKFVDKNNKTFDFDKLKEVTK 470
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
++T+NLNK+IDV +Y ++E + SN+RHRP+GIG+QGLAD F+ +R+P++ ++ LNKQI
Sbjct: 471 VITRNLNKLIDVGYYSLKECKKSNLRHRPLGIGIQGLADCFMMLRMPYESEGAKKLNKQI 530
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTP-TDLWDWAALKEKIAK 389
FE IYY AL+ASCE+A + GPY+TY GSP S+GILQ+DMWGVTP + L DW LK++I+K
Sbjct: 531 FEVIYYAALDASCELAEKYGPYETYSGSPASKGILQFDMWGVTPDSGLCDWDLLKDRISK 590
Query: 390 HGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGL 449
HG+RNSLLI+PMPTAST+QILGNNESFEP+TSNIY RRVLSGEF VVN HLL DL+ELGL
Sbjct: 591 HGIRNSLLISPMPTASTSQILGNNESFEPFTSNIYHRRVLSGEFFVVNPHLLNDLLELGL 650
Query: 450 WDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNI 509
WDD +K +I NNGSIQ+I IP+ +++LYKTVWEI QKTV+DMAADRG ++ QSQSLNI
Sbjct: 651 WDDRLKQNIIANNGSIQNILTIPEDIRELYKTVWEIKQKTVIDMAADRGPYVCQSQSLNI 710
Query: 510 YMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDARSQE 569
+M N+AK+SSMHF+GWK GLKTG+YYLRT+ A IQFT+D+ + + KD+
Sbjct: 711 HMENANFAKLSSMHFYGWKKGLKTGIYYLRTQSATRPIQFTVDQQLLKSETKEKDSLETN 770
Query: 570 EIQADQEQAMAAMIC--RRDNKED 591
+ QA + +A + C R N +D
Sbjct: 771 KRQALEPEAQKLIACPLRPTNMKD 794
Score = 748 (268.4 bits), Expect = 5.7e-135, Sum P(3) = 5.7e-135
Identities = 142/229 (62%), Positives = 179/229 (78%)
Query: 770 KYDMWGVTP-TDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIY 828
++DMWGVTP + L DW LK++I+KHG+RNSLLI+PMPTAST+QILGNNESFEP+TSNIY
Sbjct: 566 QFDMWGVTPDSGLCDWDLLKDRISKHGIRNSLLISPMPTASTSQILGNNESFEPFTSNIY 625
Query: 829 SRRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWE 888
RRVLSGEF VVN HLL DL+ELGLWDD +K +I NNGSIQ+I IP+ +++LYKTVWE
Sbjct: 626 HRRVLSGEFFVVNPHLLNDLLELGLWDDRLKQNIIANNGSIQNILTIPEDIRELYKTVWE 685
Query: 889 IPQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAA 948
I QKTV+DMAADRG ++ QSQSLNI+M N+AK+SSMHF+GWK GLKTG+YYLRT+ A
Sbjct: 686 IKQKTVIDMAADRGPYVCQSQSLNIHMENANFAKLSSMHFYGWKKGLKTGIYYLRTQSAT 745
Query: 949 NAIQFTIDKTKMANAMASKDTRSQEEIQADQEQAMAAMIC--RRDNKED 995
IQFT+D+ + + KD+ + QA + +A + C R N +D
Sbjct: 746 RPIQFTVDQQLLKSETKEKDSLETNKRQALEPEAQKLIACPLRPTNMKD 794
Score = 318 (117.0 bits), Expect = 5.7e-135, Sum P(3) = 5.7e-135
Identities = 53/86 (61%), Positives = 65/86 (75%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA AIYLEPWH D+ +F+E++KN GKEE R RDLF LW+PD FM RVE D W+LMC
Sbjct: 291 RKGAIAIYLEPWHVDVVEFIEIRKNHGKEEMRCRDLFPALWVPDLFMERVEKDQDWTLMC 350
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEG 86
P+ CRGL D WG+ F LY++YE +G
Sbjct: 351 PDECRGLQDVWGDDFKKLYEEYEKQG 376
Score = 292 (107.8 bits), Expect = 5.7e-135, Sum P(3) = 5.7e-135
Identities = 53/93 (56%), Positives = 71/93 (76%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
IG+QGLAD F+ +R+P++ ++ LNKQIFE IYY AL+ASCE+A + GPY+TY GSP S
Sbjct: 502 IGIQGLADCFMMLRMPYESEGAKKLNKQIFEVIYYAALDASCELAEKYGPYETYSGSPAS 561
Query: 653 QGILQYDMWGVTP-TDLWDWAALKVLALVYGLK 684
+GILQ+DMWGVTP + L DW LK +G++
Sbjct: 562 KGILQFDMWGVTPDSGLCDWDLLKDRISKHGIR 594
Score = 137 (53.3 bits), Expect = 1.2e-118, Sum P(3) = 1.2e-118
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 684 KLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVI--EELYNMVNKETGTRTPMISDKH 741
KLWF IL +QIETGTP++ YKDA N KSNQ+NL I L + + T T + +
Sbjct: 386 KLWFLILQAQIETGTPFICYKDAANSKSNQKNLGTIVSSNLCTEIIEYTSTDEVAVCNLA 445
Query: 742 YEIIMKNADRLNSAIIYDR 760
+ K D+ N +D+
Sbjct: 446 SIGLPKFVDKNNKTFDFDK 464
Score = 122 (48.0 bits), Expect = 5.0e-85, Sum P(2) = 5.0e-85
Identities = 38/130 (29%), Positives = 67/130 (51%)
Query: 641 GPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPY 700
G + + + V+Q ++ G+ ++L D A + A + F+ L ++I T
Sbjct: 28 GLHPLVDPARVTQAVINGLYSGIKTSEL-DELASQTCAYMAATHNDFSKLAARISTSN-- 84
Query: 701 MLYKDACNRKSNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDR 760
L+K N S+ +V +LYN + + G P+IS Y+ IM+N +R+NS I + +
Sbjct: 85 -LHK---NTSSDIG--DVASQLYNFKDNQ-GCPAPLISKPVYDFIMENRERINSKIDFSK 137
Query: 761 DFNYNFFGFK 770
DF Y++F FK
Sbjct: 138 DFEYDYFAFK 147
>SGD|S000000872 [details] [associations]
symbol:RNR1 "Major isoform of large subunit of
ribonucleotide-diphosphate reductase" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA;IDA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;IMP;IDA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003824 "catalytic
activity" evidence=IEA] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326 SGD:S000000872
Pfam:PF03477 GO:GO:0005524 GO:GO:0000166 GO:GO:0006260
EMBL:BK006939 EMBL:U18813 GO:GO:0009263 KO:K10807
InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 HOGENOM:HOG000057035
TIGRFAMs:TIGR02506 GeneTree:ENSGT00390000001372 OMA:ETIYHAS
OrthoDB:EOG480N4T EMBL:X69216 EMBL:X69217 PIR:S50573
RefSeq:NP_010993.1 PDB:1ZYZ PDB:1ZZD PDB:2CVS PDB:2CVT PDB:2CVU
PDB:2CVV PDB:2CVW PDB:2CVX PDB:2CVY PDB:2EUD PDB:2ZLF PDB:2ZLG
PDB:3K8T PDB:3PAW PDB:3RSR PDB:3S87 PDB:3S8A PDB:3S8B PDB:3S8C
PDB:3TB9 PDB:3TBA PDBsum:1ZYZ PDBsum:1ZZD PDBsum:2CVS PDBsum:2CVT
PDBsum:2CVU PDBsum:2CVV PDBsum:2CVW PDBsum:2CVX PDBsum:2CVY
PDBsum:2EUD PDBsum:2ZLF PDBsum:2ZLG PDBsum:3K8T PDBsum:3PAW
PDBsum:3RSR PDBsum:3S87 PDBsum:3S8A PDBsum:3S8B PDBsum:3S8C
PDBsum:3TB9 PDBsum:3TBA ProteinModelPortal:P21524 SMR:P21524
DIP:DIP-6299N IntAct:P21524 MINT:MINT-680321 STRING:P21524
PaxDb:P21524 PeptideAtlas:P21524 PRIDE:P21524 EnsemblFungi:YER070W
GeneID:856801 KEGG:sce:YER070W CYGD:YER070w
EvolutionaryTrace:P21524 NextBio:983047 Genevestigator:P21524
GermOnline:YER070W Uniprot:P21524
Length = 888
Score = 1682 (597.2 bits), Expect = 4.3e-173, P = 4.3e-173
Identities = 306/472 (64%), Positives = 386/472 (81%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFA+YLEPWH DIFDF++++KN GKEE RARDLF LWIPD FM+RVE + W+L
Sbjct: 293 RPGAFALYLEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFS 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
P + GLSD +G++F+ LY +YE EG+ + + A+KLW++IL++Q ETGTP+++YKDACN
Sbjct: 353 PTSAPGLSDCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACN 411
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPAD----KTYNFTKLK 266
RKSNQ+NLG IK SNLC EIVEY++ DE AVCNLAS+AL +I ++ TYNF KL
Sbjct: 412 RKSNQKNLGVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIETSEDGKTSTYNFKKLH 471
Query: 267 DVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLL 326
++AK+VT+NLN++ID N+YPVEEAR SNMRHRPI +GVQGLAD F+ +RLPFD E+RLL
Sbjct: 472 EIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDSEEARLL 531
Query: 327 NKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEK 386
N QIFETIY+ ++EASCE+A +DGPY+T++GSP SQGILQ+DMW P +WDW L++
Sbjct: 532 NIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDWDTLRKD 591
Query: 387 IAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVE 446
I KHGVRNSL +APMPTAST+QILG NE FEP TSN+YSRRVLSGEFQVVN +LLRDLV+
Sbjct: 592 IMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYLLRDLVD 651
Query: 447 LGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQS 506
LG+WD+ MK LI NGSIQ + +PQ+LKDLYKTVWEI QKT+++MAADR +IDQS S
Sbjct: 652 LGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVYIDQSHS 711
Query: 507 LNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMAN 558
LN+++ K++SMHF+GWK GLKTGMYYLRT+ A+ AIQFTID+ K+A+
Sbjct: 712 LNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQ-KIAD 762
Score = 687 (246.9 bits), Expect = 1.0e-112, Sum P(3) = 1.0e-112
Identities = 127/193 (65%), Positives = 157/193 (81%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
++DMW P +WDW L++ I KHGVRNSL +APMPTAST+QILG NE FEP TSN+YS
Sbjct: 571 QFDMWDQKPYGMWDWDTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYS 630
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQVVN +LLRDLV+LG+WD+ MK LI NGSIQ + +PQ+LKDLYKTVWEI
Sbjct: 631 RRVLSGEFQVVNPYLLRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEI 690
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QKT+++MAADR +IDQS SLN+++ K++SMHF+GWK GLKTGMYYLRT+ A+
Sbjct: 691 SQKTIINMAADRSVYIDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASA 750
Query: 950 AIQFTIDKTKMAN 962
AIQFTID+ K+A+
Sbjct: 751 AIQFTIDQ-KIAD 762
Score = 316 (116.3 bits), Expect = 1.0e-112, Sum P(3) = 1.0e-112
Identities = 54/86 (62%), Positives = 68/86 (79%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFA+YLEPWH DIFDF++++KN GKEE RARDLF LWIPD FM+RVE + W+L
Sbjct: 293 RPGAFALYLEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFS 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEG 86
P + GLSD +G++F+ LY +YE EG
Sbjct: 353 PTSAPGLSDCYGDEFEALYTRYEKEG 378
Score = 316 (116.3 bits), Expect = 3.3e-52, Sum P(2) = 3.3e-52
Identities = 60/136 (44%), Positives = 88/136 (64%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+GVQGLAD F+ +RLPFD E+RLLN QIFETIY+ ++EASCE+A +DGPY+T++GSP S
Sbjct: 507 LGVQGLADTFMLLRLPFDSEEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPAS 566
Query: 653 QGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNR-KS 711
QGILQ+DMW P +WDW L+ + +G++ + + + + Y + S
Sbjct: 567 QGILQFDMWDQKPYGMWDWDTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTS 626
Query: 712 NQQNLEVIEELYNMVN 727
N + V+ + +VN
Sbjct: 627 NMYSRRVLSGEFQVVN 642
Score = 192 (72.6 bits), Expect = 2.2e-85, Sum P(2) = 2.2e-85
Identities = 49/120 (40%), Positives = 71/120 (59%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
V+Q I+ GVT +L D A + A + + +A L ++I L+K +
Sbjct: 39 VTQRIISGVYEGVTTIEL-DNLAAETCAYMTTVHPDYATLAARIAISN---LHK-----Q 89
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
+ +Q +V+E+LY VN TG PMISD Y I+M+N D+LNSAI+YDRDF Y++FGFK
Sbjct: 90 TTKQFSKVVEDLYRYVNAATGKPAPMISDDVYNIVMENKDKLNSAIVYDRDFQYSYFGFK 149
Score = 152 (58.6 bits), Expect = 1.0e-112, Sum P(3) = 1.0e-112
Identities = 26/37 (70%), Positives = 35/37 (94%)
Query: 684 KLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
KLW++IL++Q ETGTP+++YKDACNRKSNQ+NL VI+
Sbjct: 387 KLWYSILEAQTETGTPFVVYKDACNRKSNQKNLGVIK 423
>CGD|CAL0001524 [details] [associations]
symbol:RNR1 species:5476 "Candida albicans" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;NAS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA] [GO:0090329 "regulation of DNA-dependent DNA
replication" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0007090 "regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0009267 "cellular response to
starvation" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 CGD:CAL0001524 Pfam:PF03477
GO:GO:0005524 GO:GO:0071216 GO:GO:0036180 GO:GO:0006260
GO:GO:0009267 GO:GO:0036170 EMBL:AACQ01000088 EMBL:AACQ01000087
KO:K10807 InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506
RefSeq:XP_715255.1 RefSeq:XP_715320.1 ProteinModelPortal:Q5A0N3
SMR:Q5A0N3 STRING:Q5A0N3 GeneID:3642989 GeneID:3643046
KEGG:cal:CaO19.13201 KEGG:cal:CaO19.5779 Uniprot:Q5A0N3
Length = 854
Score = 1676 (595.0 bits), Expect = 1.8e-172, P = 1.8e-172
Identities = 307/469 (65%), Positives = 382/469 (81%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFA+YLEPWH DIFDF++++KN GKEE RARDLF LWIPD FM+RVE + W+L
Sbjct: 293 RPGAFALYLEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFS 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN GL+D +G++F++LY KYE E + + + A+KLW+AIL +Q ETGTP+MLYKD+CN
Sbjct: 353 PNEAPGLADVYGDEFEELYTKYEKENRGRQTIKAQKLWYAILGAQTETGTPFMLYKDSCN 412
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKT--YNFTKLKDV 268
KSNQ+NLG IK SNLC EIVEY++ DEVAVCNLASIAL ++ +K+ YNF KL V
Sbjct: 413 NKSNQKNLGIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVENDEKSTWYNFDKLHQV 472
Query: 269 AKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNK 328
K+VT+NLN++ID N YPV EA SNMRHRPI +GVQGLAD F+++RLPFD E+R LN
Sbjct: 473 TKVVTRNLNRVIDRNHYPVPEAERSNMRHRPIALGVQGLADAFMELRLPFDSQEARELNI 532
Query: 329 QIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIA 388
QIFETIY+ A+EAS E+A +G Y+TY GSP SQG+LQ+D+W PT+LWDW LK+ +A
Sbjct: 533 QIFETIYHAAVEASIELAKEEGAYETYPGSPASQGLLQFDLWNRKPTELWDWDTLKQDLA 592
Query: 389 KHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELG 448
KHG+RNSLL+APMPTAST+QILGNNE FEPYTSNIYSRRVL+GEFQ+VN +LL+DLV+LG
Sbjct: 593 KHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYLLKDLVDLG 652
Query: 449 LWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLN 508
+W+D MK +I NNGSIQ + IP ++K LYKTVWEI QK ++DMAADR AFIDQSQSLN
Sbjct: 653 VWNDAMKSSIIANNGSIQALPNIPDEIKALYKTVWEISQKHIIDMAADRAAFIDQSQSLN 712
Query: 509 IYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMA 557
I++ + K++SMHF+GWK GLKTGMYYLRT+ A+ AIQFTID+ K+A
Sbjct: 713 IHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQ-KIA 760
Score = 717 (257.5 bits), Expect = 9.3e-117, Sum P(3) = 9.3e-117
Identities = 131/192 (68%), Positives = 163/192 (84%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
++D+W PT+LWDW LK+ +AKHG+RNSLL+APMPTAST+QILGNNE FEPYTSNIYS
Sbjct: 570 QFDLWNRKPTELWDWDTLKQDLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYS 629
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVL+GEFQ+VN +LL+DLV+LG+W+D MK +I NNGSIQ + IP ++K LYKTVWEI
Sbjct: 630 RRVLAGEFQIVNPYLLKDLVDLGVWNDAMKSSIIANNGSIQALPNIPDEIKALYKTVWEI 689
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QK ++DMAADR AFIDQSQSLNI++ + K++SMHF+GWK GLKTGMYYLRT+ A+
Sbjct: 690 SQKHIIDMAADRAAFIDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASA 749
Query: 950 AIQFTIDKTKMA 961
AIQFTID+ K+A
Sbjct: 750 AIQFTIDQ-KIA 760
Score = 318 (117.0 bits), Expect = 9.3e-117, Sum P(3) = 9.3e-117
Identities = 54/85 (63%), Positives = 68/85 (80%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFA+YLEPWH DIFDF++++KN GKEE RARDLF LWIPD FM+RVE + W+L
Sbjct: 293 RPGAFALYLEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFS 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAE 85
PN GL+D +G++F++LY KYE E
Sbjct: 353 PNEAPGLADVYGDEFEELYTKYEKE 377
Score = 301 (111.0 bits), Expect = 6.5e-51, Sum P(2) = 6.5e-51
Identities = 63/138 (45%), Positives = 90/138 (65%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+GVQGLAD F+++RLPFD E+R LN QIFETIY+ A+EAS E+A +G Y+TY GSP S
Sbjct: 506 LGVQGLADAFMELRLPFDSQEARELNIQIFETIYHAAVEASIELAKEEGAYETYPGSPAS 565
Query: 653 QGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETG-TPYMLYKDACNRK- 710
QG+LQ+D+W PT+LWDW LK +G++ ++L + + T T +L + C
Sbjct: 566 QGLLQFDLWNRKPTELWDWDTLKQDLAKHGMRN--SLLVAPMPTASTSQILGNNECFEPY 623
Query: 711 -SNQQNLEVIEELYNMVN 727
SN + V+ + +VN
Sbjct: 624 TSNIYSRRVLAGEFQIVN 641
Score = 199 (75.1 bits), Expect = 7.1e-90, Sum P(2) = 7.1e-90
Identities = 46/120 (38%), Positives = 75/120 (62%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
++Q ++ GVT +L D A ++ A + + +A+L ++I L+K +
Sbjct: 39 ITQKVISGVYQGVTTIEL-DNLAAEIAATMTTIHPDYAVLAARIAVSN---LHK-----Q 89
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
+ +Q +V ++LY +N +TG +PMIS + Y+IIM++ D LNSAI+YDRDFNYN+FGFK
Sbjct: 90 TTKQYSKVSKDLYEYINPKTGLHSPMISKETYDIIMEHEDELNSAIVYDRDFNYNYFGFK 149
Score = 150 (57.9 bits), Expect = 9.3e-117, Sum P(3) = 9.3e-117
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 684 KLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
KLW+AIL +Q ETGTP+MLYKD+CN KSNQ+NL +I+
Sbjct: 388 KLWYAILGAQTETGTPFMLYKDSCNNKSNQKNLGIIK 424
Score = 45 (20.9 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 2 PGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGL 40
PG +Y + + +++ E K+N G++ +A+ L+Y +
Sbjct: 357 PGLADVYGDEFE-ELYTKYE-KENRGRQTIKAQKLWYAI 393
Score = 37 (18.1 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 625 IYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAA 673
++ A+++S I A +G Q P L +W ++ + D AA
Sbjct: 653 VWNDAMKSS--IIANNGSIQALPNIPDEIKALYKTVWEISQKHIIDMAA 699
>UNIPROTKB|Q5A0N3 [details] [associations]
symbol:RNR1 "Ribonucleoside-diphosphate reductase"
species:237561 "Candida albicans SC5314" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=NAS] [GO:0009267 "cellular response
to starvation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 CGD:CAL0001524 Pfam:PF03477
GO:GO:0005524 GO:GO:0071216 GO:GO:0036180 GO:GO:0006260
GO:GO:0009267 GO:GO:0036170 EMBL:AACQ01000088 EMBL:AACQ01000087
KO:K10807 InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506
RefSeq:XP_715255.1 RefSeq:XP_715320.1 ProteinModelPortal:Q5A0N3
SMR:Q5A0N3 STRING:Q5A0N3 GeneID:3642989 GeneID:3643046
KEGG:cal:CaO19.13201 KEGG:cal:CaO19.5779 Uniprot:Q5A0N3
Length = 854
Score = 1676 (595.0 bits), Expect = 1.8e-172, P = 1.8e-172
Identities = 307/469 (65%), Positives = 382/469 (81%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFA+YLEPWH DIFDF++++KN GKEE RARDLF LWIPD FM+RVE + W+L
Sbjct: 293 RPGAFALYLEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFS 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN GL+D +G++F++LY KYE E + + + A+KLW+AIL +Q ETGTP+MLYKD+CN
Sbjct: 353 PNEAPGLADVYGDEFEELYTKYEKENRGRQTIKAQKLWYAILGAQTETGTPFMLYKDSCN 412
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKT--YNFTKLKDV 268
KSNQ+NLG IK SNLC EIVEY++ DEVAVCNLASIAL ++ +K+ YNF KL V
Sbjct: 413 NKSNQKNLGIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVENDEKSTWYNFDKLHQV 472
Query: 269 AKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNK 328
K+VT+NLN++ID N YPV EA SNMRHRPI +GVQGLAD F+++RLPFD E+R LN
Sbjct: 473 TKVVTRNLNRVIDRNHYPVPEAERSNMRHRPIALGVQGLADAFMELRLPFDSQEARELNI 532
Query: 329 QIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIA 388
QIFETIY+ A+EAS E+A +G Y+TY GSP SQG+LQ+D+W PT+LWDW LK+ +A
Sbjct: 533 QIFETIYHAAVEASIELAKEEGAYETYPGSPASQGLLQFDLWNRKPTELWDWDTLKQDLA 592
Query: 389 KHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELG 448
KHG+RNSLL+APMPTAST+QILGNNE FEPYTSNIYSRRVL+GEFQ+VN +LL+DLV+LG
Sbjct: 593 KHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYLLKDLVDLG 652
Query: 449 LWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLN 508
+W+D MK +I NNGSIQ + IP ++K LYKTVWEI QK ++DMAADR AFIDQSQSLN
Sbjct: 653 VWNDAMKSSIIANNGSIQALPNIPDEIKALYKTVWEISQKHIIDMAADRAAFIDQSQSLN 712
Query: 509 IYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMA 557
I++ + K++SMHF+GWK GLKTGMYYLRT+ A+ AIQFTID+ K+A
Sbjct: 713 IHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQ-KIA 760
Score = 717 (257.5 bits), Expect = 9.3e-117, Sum P(3) = 9.3e-117
Identities = 131/192 (68%), Positives = 163/192 (84%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
++D+W PT+LWDW LK+ +AKHG+RNSLL+APMPTAST+QILGNNE FEPYTSNIYS
Sbjct: 570 QFDLWNRKPTELWDWDTLKQDLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYS 629
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVL+GEFQ+VN +LL+DLV+LG+W+D MK +I NNGSIQ + IP ++K LYKTVWEI
Sbjct: 630 RRVLAGEFQIVNPYLLKDLVDLGVWNDAMKSSIIANNGSIQALPNIPDEIKALYKTVWEI 689
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QK ++DMAADR AFIDQSQSLNI++ + K++SMHF+GWK GLKTGMYYLRT+ A+
Sbjct: 690 SQKHIIDMAADRAAFIDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASA 749
Query: 950 AIQFTIDKTKMA 961
AIQFTID+ K+A
Sbjct: 750 AIQFTIDQ-KIA 760
Score = 318 (117.0 bits), Expect = 9.3e-117, Sum P(3) = 9.3e-117
Identities = 54/85 (63%), Positives = 68/85 (80%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFA+YLEPWH DIFDF++++KN GKEE RARDLF LWIPD FM+RVE + W+L
Sbjct: 293 RPGAFALYLEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFS 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAE 85
PN GL+D +G++F++LY KYE E
Sbjct: 353 PNEAPGLADVYGDEFEELYTKYEKE 377
Score = 301 (111.0 bits), Expect = 6.5e-51, Sum P(2) = 6.5e-51
Identities = 63/138 (45%), Positives = 90/138 (65%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+GVQGLAD F+++RLPFD E+R LN QIFETIY+ A+EAS E+A +G Y+TY GSP S
Sbjct: 506 LGVQGLADAFMELRLPFDSQEARELNIQIFETIYHAAVEASIELAKEEGAYETYPGSPAS 565
Query: 653 QGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETG-TPYMLYKDACNRK- 710
QG+LQ+D+W PT+LWDW LK +G++ ++L + + T T +L + C
Sbjct: 566 QGLLQFDLWNRKPTELWDWDTLKQDLAKHGMRN--SLLVAPMPTASTSQILGNNECFEPY 623
Query: 711 -SNQQNLEVIEELYNMVN 727
SN + V+ + +VN
Sbjct: 624 TSNIYSRRVLAGEFQIVN 641
Score = 199 (75.1 bits), Expect = 7.1e-90, Sum P(2) = 7.1e-90
Identities = 46/120 (38%), Positives = 75/120 (62%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
++Q ++ GVT +L D A ++ A + + +A+L ++I L+K +
Sbjct: 39 ITQKVISGVYQGVTTIEL-DNLAAEIAATMTTIHPDYAVLAARIAVSN---LHK-----Q 89
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
+ +Q +V ++LY +N +TG +PMIS + Y+IIM++ D LNSAI+YDRDFNYN+FGFK
Sbjct: 90 TTKQYSKVSKDLYEYINPKTGLHSPMISKETYDIIMEHEDELNSAIVYDRDFNYNYFGFK 149
Score = 150 (57.9 bits), Expect = 9.3e-117, Sum P(3) = 9.3e-117
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 684 KLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
KLW+AIL +Q ETGTP+MLYKD+CN KSNQ+NL +I+
Sbjct: 388 KLWYAILGAQTETGTPFMLYKDSCNNKSNQKNLGIIK 424
Score = 45 (20.9 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 2 PGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGL 40
PG +Y + + +++ E K+N G++ +A+ L+Y +
Sbjct: 357 PGLADVYGDEFE-ELYTKYE-KENRGRQTIKAQKLWYAI 393
Score = 37 (18.1 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 625 IYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAA 673
++ A+++S I A +G Q P L +W ++ + D AA
Sbjct: 653 VWNDAMKSS--IIANNGSIQALPNIPDEIKALYKTVWEISQKHIIDMAA 699
>SGD|S000001328 [details] [associations]
symbol:RNR3 "Minor isoform of the large subunit of the RNR
complex" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0009263 "deoxyribonucleotide
biosynthetic process" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA;TAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;IDA] [GO:0003824 "catalytic
activity" evidence=IEA] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477
SGD:S000001328 GO:GO:0005739 GO:GO:0005524 GO:GO:0006260
EMBL:BK006942 EMBL:Z38060 GO:GO:0009263 RefSeq:NP_012198.3
GeneID:854744 KEGG:sce:YIL066C KO:K10807 InterPro:IPR005144
PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 HOGENOM:HOG000057035 TIGRFAMs:TIGR02506
GeneTree:ENSGT00390000001372 OrthoDB:EOG480N4T EMBL:M58012
PIR:S48413 RefSeq:NP_012204.3 ProteinModelPortal:P21672 SMR:P21672
DIP:DIP-2563N IntAct:P21672 MINT:MINT-425113 STRING:P21672
PaxDb:P21672 PeptideAtlas:P21672 PRIDE:P21672 EnsemblFungi:YIL066C
GeneID:854750 KEGG:sce:YIL060W CYGD:YIL066c OMA:RTPFICQ
NextBio:977464 Genevestigator:P21672 GermOnline:YIL066C
Uniprot:P21672
Length = 869
Score = 1665 (591.2 bits), Expect = 2.7e-171, P = 2.7e-171
Identities = 303/483 (62%), Positives = 388/483 (80%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFA++LEPWH DIFDF++++K GKEE RARDLF LWIPD FM+RV+ D W+L
Sbjct: 293 RPGAFALFLEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFS 352
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
P+ GL D WG++F++LY +YE EG+ + + A+KLW+AIL +Q ETGTP+M+YKDACN
Sbjct: 353 PSAAPGLDDVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACN 411
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPAD--KT--YNFTKLK 266
RK+NQQNLGTIK SNLC EIVEY+S DE AVCNLASIAL ++ ++ KT YNF +L
Sbjct: 412 RKTNQQNLGTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEVSEDGKTASYNFERLH 471
Query: 267 DVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLL 326
++AK++T NLN++ID N+YPV EARNSNM+HRPI +GVQGLAD ++ +RLPF+ E++ L
Sbjct: 472 EIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFESEEAQTL 531
Query: 327 NKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEK 386
NKQIFETIY+ LEASCE+A ++G Y T+EGSP S+GILQ+DMW P +WDW L++
Sbjct: 532 NKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDWETLRKD 591
Query: 387 IAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVE 446
I KHG+RNSL +APMPTAST+QILG NE FEP TSN+YSRRVLSGEFQVVN +LLRDLV+
Sbjct: 592 IVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYLLRDLVD 651
Query: 447 LGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQS 506
LG+WDD+MK LI NGSIQ + +PQ+LK+LYKTVWEI QKT+++MAADR +IDQS S
Sbjct: 652 LGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIYIDQSHS 711
Query: 507 LNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDAR 566
LN+++ + K++SMHF+GWK GLKTGMYYLRT+ A+ AIQFTID+ ++A+ A+ A
Sbjct: 712 LNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQ-EVADQAATHIAS 770
Query: 567 SQE 569
E
Sbjct: 771 VSE 773
Score = 688 (247.2 bits), Expect = 6.7e-99, Sum P(2) = 6.7e-99
Identities = 126/197 (63%), Positives = 161/197 (81%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
++DMW P +WDW L++ I KHG+RNSL +APMPTAST+QILG NE FEP TSN+YS
Sbjct: 571 QFDMWNAKPFGMWDWETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYS 630
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVLSGEFQVVN +LLRDLV+LG+WDD+MK LI NGSIQ + +PQ+LK+LYKTVWEI
Sbjct: 631 RRVLSGEFQVVNPYLLRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEI 690
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QKT+++MAADR +IDQS SLN+++ + K++SMHF+GWK GLKTGMYYLRT+ A+
Sbjct: 691 SQKTIINMAADRAIYIDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASA 750
Query: 950 AIQFTIDKTKMANAMAS 966
AIQFTID+ ++A+ A+
Sbjct: 751 AIQFTIDQ-EVADQAAT 766
Score = 319 (117.4 bits), Expect = 6.7e-99, Sum P(2) = 6.7e-99
Identities = 53/86 (61%), Positives = 68/86 (79%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFA++LEPWH DIFDF++++K GKEE RARDLF LWIPD FM+RV+ D W+L
Sbjct: 293 RPGAFALFLEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFS 352
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEG 86
P+A GL D WG++F++LY +YE EG
Sbjct: 353 PSAAPGLDDVWGDEFEELYTRYEREG 378
Score = 302 (111.4 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 57/136 (41%), Positives = 85/136 (62%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+GVQGLAD ++ +RLPF+ E++ LNKQIFETIY+ LEASCE+A ++G Y T+EGSP S
Sbjct: 507 LGVQGLADTYMMLRLPFESEEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPAS 566
Query: 653 QGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNR-KS 711
+GILQ+DMW P +WDW L+ + +GL+ + + + + Y + S
Sbjct: 567 KGILQFDMWNAKPFGMWDWETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTS 626
Query: 712 NQQNLEVIEELYNMVN 727
N + V+ + +VN
Sbjct: 627 NMYSRRVLSGEFQVVN 642
Score = 189 (71.6 bits), Expect = 3.5e-85, Sum P(2) = 3.5e-85
Identities = 48/120 (40%), Positives = 71/120 (59%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
V+Q I+ GVT +L D A + A + + +A L ++I L+K +
Sbjct: 39 VTQRIISGVYSGVTTVEL-DNLAAETCAYMTTVHPDYATLAARIAISN---LHK-----Q 89
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
+ +Q +VIE+L++ +N TG PMISD+ Y I+M+N D LNSAI+YDRDF Y +FGFK
Sbjct: 90 TTKQFSKVIEDLHDWINPATGKHAPMISDEIYNIVMENKDTLNSAIVYDRDFQYTYFGFK 149
Score = 162 (62.1 bits), Expect = 2.5e-82, Sum P(2) = 2.5e-82
Identities = 36/82 (43%), Positives = 51/82 (62%)
Query: 640 DGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKVLA-LVYGLKLWFAILDSQIETGT 698
DGP+ + S + G+ D+WG +L+ + + KLW+AIL +Q ETGT
Sbjct: 345 DGPWTLFSPS-AAPGL--DDVWGDEFEELYTRYEREGRGKTIKAQKLWYAILQAQTETGT 401
Query: 699 PYMLYKDACNRKSNQQNLEVIE 720
P+M+YKDACNRK+NQQNL I+
Sbjct: 402 PFMVYKDACNRKTNQQNLGTIK 423
>UNIPROTKB|P50647 [details] [associations]
symbol:RNR1 "Ribonucleoside-diphosphate reductase large
subunit" species:5838 "Plasmodium falciparum FCR-3/Gambia"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0009263 InterPro:IPR005144 PROSITE:PS51161
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506
EMBL:AF205580 PIR:B48687 ProteinModelPortal:P50647 SMR:P50647
Uniprot:P50647
Length = 804
Score = 1626 (577.4 bits), Expect = 3.7e-167, P = 3.7e-167
Identities = 311/516 (60%), Positives = 391/516 (75%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R G++A+Y+EPWH DIF+FL+L+KN GKEE RARDLFY +W+PD FM+RV+ + W+LMC
Sbjct: 292 RKGSYAVYIEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMC 351
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN C GLS++WGE+F+ LY KYE E + V A+ LWFAIL SQIETG P LYKD+CN
Sbjct: 352 PNECPGLSETWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPIYLYKDSCN 411
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
K + NLGTIKCSNLC EI+EYTS DEVAVCNLASIAL +++ K +NF KL ++ K
Sbjct: 412 AKPIK-NLGTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFVDLEKKEFNFKKLYEITK 470
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
I+T+NL+KII+ N+YPV+EA+ SN RHRPIGIGVQGLAD F+ +R ++ + ++ LNK+I
Sbjct: 471 IITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYLYESDAAKELNKRI 530
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGV-TPTDLWDWAALKEKIAK 389
+ET+YY ALE S + + GPY++Y+GSP SQGILQ+DMW WDW LK KIAK
Sbjct: 531 YETMYYAALEMSVDWL-QSGPYESYQGSPGSQGILQFDMWNAKVDNKYWDWDELKLKIAK 589
Query: 390 HGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGL 449
G+RN LL+APMPTAST+QILGNNESFEPYTSNIY RRVLSGEF VVN HLL+DL + GL
Sbjct: 590 TGLRNLLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPHLLKDLFDRGL 649
Query: 450 WDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNI 509
WD++MK QLI +NGSIQ I IP LK+LYKTVWEI QK ++DMAADRG FIDQSQSLNI
Sbjct: 650 WDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQKNIIDMAADRGYFIDQSQSLNI 709
Query: 510 YMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASKDAR--- 566
Y+ + +AK+SSMHF+GW+ GLKTG YYLRT+ A +AI+FT+D NA+ K+A
Sbjct: 710 YIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTHVAKNAVKLKNADGVQ 769
Query: 567 -----SQEEIQADQEQAMAAMICRRDNKEDCIGVQG 597
S+E IQ +Q + + +N E C+ G
Sbjct: 770 ITREVSRETIQLNQRYSKCVSF-KSNNDEQCLMCSG 804
Score = 709 (254.6 bits), Expect = 1.5e-126, Sum P(3) = 1.5e-126
Identities = 144/237 (60%), Positives = 174/237 (73%)
Query: 770 KYDMWGV-TPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIY 828
++DMW WDW LK KIAK G+RN LL+APMPTAST+QILGNNESFEPYTSNIY
Sbjct: 565 QFDMWNAKVDNKYWDWDELKLKIAKTGLRNLLLLAPMPTASTSQILGNNESFEPYTSNIY 624
Query: 829 SRRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWE 888
RRVLSGEF VVN HLL+DL + GLWD++MK QLI +NGSIQ I IP LK+LYKTVWE
Sbjct: 625 YRRVLSGEFFVVNPHLLKDLFDRGLWDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWE 684
Query: 889 IPQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAA 948
I QK ++DMAADRG FIDQSQSLNIY+ + +AK+SSMHF+GW+ GLKTG YYLRT+ A
Sbjct: 685 IKQKNIIDMAADRGYFIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAAT 744
Query: 949 NAIQFTIDK------TKMANAMASKDTR--SQEEIQADQEQAMAAMICRRDNKEDCL 997
+AI+FT+D K+ NA + TR S+E IQ +Q + + +N E CL
Sbjct: 745 DAIKFTVDTHVAKNAVKLKNADGVQITREVSRETIQLNQRYSKCVSF-KSNNDEQCL 800
Score = 341 (125.1 bits), Expect = 1.5e-126, Sum P(3) = 1.5e-126
Identities = 54/87 (62%), Positives = 72/87 (82%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R G++A+Y+EPWH DIF+FL+L+KN GKEE RARDLFY +W+PD FM+RV+ + W+LMC
Sbjct: 292 RKGSYAVYIEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMC 351
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEGL 87
PN C GLS++WGE+F+ LY KYE E +
Sbjct: 352 PNECPGLSETWGEEFEKLYTKYEEENM 378
Score = 229 (85.7 bits), Expect = 1.5e-126, Sum P(3) = 1.5e-126
Identities = 45/93 (48%), Positives = 63/93 (67%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
IGVQGLAD F+ +R ++ + ++ LNK+I+ET+YY ALE S + + GPY++Y+GSP S
Sbjct: 502 IGVQGLADTFMLLRYLYESDAAKELNKRIYETMYYAALEMSVDWL-QSGPYESYQGSPGS 560
Query: 653 QGILQYDMWGV-TPTDLWDWAALKVLALVYGLK 684
QGILQ+DMW WDW LK+ GL+
Sbjct: 561 QGILQFDMWNAKVDNKYWDWDELKLKIAKTGLR 593
Score = 110 (43.8 bits), Expect = 5.0e-114, Sum P(3) = 5.0e-114
Identities = 23/36 (63%), Positives = 26/36 (72%)
Query: 685 LWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
LWFAIL SQIETG P LYKD+CN K + NL I+
Sbjct: 388 LWFAILQSQIETGVPIYLYKDSCNAKPIK-NLGTIK 422
Score = 105 (42.0 bits), Expect = 4.7e-79, Sum P(2) = 4.7e-79
Identities = 36/120 (30%), Positives = 57/120 (47%)
Query: 651 VSQGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
V+QG++ M+ T D A + A + F+IL ++I T D ++
Sbjct: 39 VTQGVIN-GMYSSIKTCELDELAAQTCAYMATTHPDFSILAARITT--------DNLHKN 89
Query: 711 SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFFGFK 770
++ EV E LY + G +IS + Y+ I+ + RLN I Y FNY++FGFK
Sbjct: 90 TSDDVAEVAEALYTYKDGR-GRPASLISKEVYDFILLHKVRLNKEIDYTTHFNYDYFGFK 148
Score = 44 (20.5 bits), Expect = 2.6e-95, Sum P(3) = 2.6e-95
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 10 EPWHGDIFDFLELK---KNTGKEEFRARDLFYGL 40
E W G+ F+ L K +N GK+ A+DL++ +
Sbjct: 360 ETW-GEEFEKLYTKYEEENMGKKTVLAQDLWFAI 392
>DICTYBASE|DDB_G0284071 [details] [associations]
symbol:rnrA "ribonucleoside-diphosphate reductase"
species:44689 "Dictyostelium discoideum" [GO:0005515 "protein
binding" evidence=IPI] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA;ISS]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA;ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
UniPathway:UPA00326 dictyBase:DDB_G0284071 Pfam:PF03477
GO:GO:0005524 GenomeReviews:CM000153_GR GO:GO:0006260
EMBL:AAFI02000063 GO:GO:0009263 KO:K10807 InterPro:IPR005144
PROSITE:PS51161 eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 TIGRFAMs:TIGR02506 OMA:YKYGVKT RefSeq:XP_638726.1
HSSP:P21524 ProteinModelPortal:Q54Q71 SMR:Q54Q71 STRING:Q54Q71
EnsemblProtists:DDB0230075 GeneID:8624396 KEGG:ddi:DDB_G0284071
ProtClustDB:CLSZ2429164 GO:GO:0009186 Uniprot:Q54Q71
Length = 870
Score = 1623 (576.4 bits), Expect = 7.6e-167, P = 7.6e-167
Identities = 300/471 (63%), Positives = 377/471 (80%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GAFA+YLEPWH D+F+F++LKKNTGKEE RARDLFY LW+ D FM RVE + W+L C
Sbjct: 311 RKGAFAVYLEPWHADVFEFIDLKKNTGKEEMRARDLFYALWVSDIFMERVEQNGDWALFC 370
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQV-PARKLWFAILDSQIETGTPYMLYKDAC 209
PN GL+++ E+ LY KYEA R+V A++LWFAI++SQ+ETGTP++LYKDAC
Sbjct: 371 PNEAPGLAETHSEEHRALYLKYEATPDLPRRVIKAQELWFAIMESQVETGTPFILYKDAC 430
Query: 210 NRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYI-------NPADKTYNF 262
N KSNQ+NLGTI SNLCTEI++YTS DE+AVCNLASIAL ++ +P +K ++
Sbjct: 431 NAKSNQKNLGTISSSNLCTEIIQYTSPDEIAVCNLASIALPKFVRQKVGSTDPKEKEFDH 490
Query: 263 TKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNE 322
L ++ K++T NLN IID N+YPV EA+ SN+RHRPIGIG+QGLAD+FI+MR+PFD
Sbjct: 491 QFLFEITKLITVNLNVIIDRNYYPVAEAKTSNLRHRPIGIGIQGLADVFIKMRMPFDSVA 550
Query: 323 SRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAA 382
+ LN +I ETIY+ AL AS E+A RDG Y++++GSP S+GILQ+DMW VTP+ W+WA
Sbjct: 551 AAKLNVEIAETIYFAALTASHELAIRDGTYESFKGSPASKGILQFDMWNVTPSSRWNWAE 610
Query: 383 LKEKIA-KHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLL 441
LK+ I K G+RNSLLIAPMPTAST+QILGNNE FEPYTSNIYSRRVL+GEF +VN LL
Sbjct: 611 LKDNIVNKGGLRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFTIVNKQLL 670
Query: 442 RDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFI 501
DL+ELG+W MK+Q++ GSIQ I GIP LK+LYKTVWEI Q+T++DMAADRGAFI
Sbjct: 671 EDLMELGIWSPEMKNQIVAARGSIQSIGGIPDDLKELYKTVWEIRQRTLIDMAADRGAFI 730
Query: 502 DQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTID 552
DQSQS N+++AE +AK++SMHF+ WK GLKTGMYYLRT+PAA+AIQFT+D
Sbjct: 731 DQSQSFNVFIAEPTFAKLTSMHFYSWKKGLKTGMYYLRTRPAADAIQFTVD 781
Score = 717 (257.5 bits), Expect = 2.8e-115, Sum P(3) = 2.8e-115
Identities = 131/188 (69%), Positives = 159/188 (84%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIA-KHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIY 828
++DMW VTP+ W+WA LK+ I K G+RNSLLIAPMPTAST+QILGNNE FEPYTSNIY
Sbjct: 594 QFDMWNVTPSSRWNWAELKDNIVNKGGLRNSLLIAPMPTASTSQILGNNECFEPYTSNIY 653
Query: 829 SRRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWE 888
SRRVL+GEF +VN LL DL+ELG+W MK+Q++ GSIQ I GIP LK+LYKTVWE
Sbjct: 654 SRRVLAGEFTIVNKQLLEDLMELGIWSPEMKNQIVAARGSIQSIGGIPDDLKELYKTVWE 713
Query: 889 IPQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAA 948
I Q+T++DMAADRGAFIDQSQS N+++AE +AK++SMHF+ WK GLKTGMYYLRT+PAA
Sbjct: 714 IRQRTLIDMAADRGAFIDQSQSFNVFIAEPTFAKLTSMHFYSWKKGLKTGMYYLRTRPAA 773
Query: 949 NAIQFTID 956
+AIQFT+D
Sbjct: 774 DAIQFTVD 781
Score = 303 (111.7 bits), Expect = 2.8e-115, Sum P(3) = 2.8e-115
Identities = 52/84 (61%), Positives = 64/84 (76%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GAFA+YLEPWH D+F+F++LKKNTGKEE RARDLFY LW+ D FM RVE + W+L C
Sbjct: 311 RKGAFAVYLEPWHADVFEFIDLKKNTGKEEMRARDLFYALWVSDIFMERVEQNGDWALFC 370
Query: 61 PNACRGLSDSWGEKFDDLYKKYEA 84
PN GL+++ E+ LY KYEA
Sbjct: 371 PNEAPGLAETHSEEHRALYLKYEA 394
Score = 285 (105.4 bits), Expect = 1.5e-47, Sum P(2) = 1.5e-47
Identities = 63/140 (45%), Positives = 91/140 (65%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
IG+QGLAD+FI+MR+PFD + LN +I ETIY+ AL AS E+A RDG Y++++GSP S
Sbjct: 530 IGIQGLADVFIKMRMPFDSVAAAKLNVEIAETIYFAALTASHELAIRDGTYESFKGSPAS 589
Query: 653 QGILQYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETG-TPYMLYKDACNRK- 710
+GILQ+DMW VTP+ W+WA LK + G L ++L + + T T +L + C
Sbjct: 590 KGILQFDMWNVTPSSRWNWAELKDNIVNKG-GLRNSLLIAPMPTASTSQILGNNECFEPY 648
Query: 711 -SNQQNLEVIEELYNMVNKE 729
SN + V+ + +VNK+
Sbjct: 649 TSNIYSRRVLAGEFTIVNKQ 668
Score = 151 (58.2 bits), Expect = 2.8e-115, Sum P(3) = 2.8e-115
Identities = 26/36 (72%), Positives = 33/36 (91%)
Query: 684 KLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVI 719
+LWFAI++SQ+ETGTP++LYKDACN KSNQ+NL I
Sbjct: 407 ELWFAIMESQVETGTPFILYKDACNAKSNQKNLGTI 442
Score = 145 (56.1 bits), Expect = 3.5e-84, Sum P(2) = 3.5e-84
Identities = 24/63 (38%), Positives = 45/63 (71%)
Query: 708 NRKSNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYNFF 767
++++++ +E +++ Y +N ++ P++S + YEI+MK+ +RL S I Y RDF+Y+FF
Sbjct: 105 HKQTSKSFVETVKKQYEFINPKSNLLAPLVSKELYEIVMKHGERLESVIDYYRDFDYDFF 164
Query: 768 GFK 770
GFK
Sbjct: 165 GFK 167
Score = 51 (23.0 bits), Expect = 5.1e-23, Sum P(2) = 5.1e-23
Identities = 41/182 (22%), Positives = 75/182 (41%)
Query: 507 LNIYMAE-INYAKMSSMHFHGWKLGLKTGMYY-LRTKPAANAI-QFTI---------DKT 554
LN+ +AE I +A +++ H +L ++ G Y + PA+ I QF + +
Sbjct: 554 LNVEIAETIYFAALTASH----ELAIRDGTYESFKGSPASKGILQFDMWNVTPSSRWNWA 609
Query: 555 KMANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCIGVQGLADLFIQMRLPFDCNES 614
++ + + +K + A A + I N E C ++++ + L E
Sbjct: 610 ELKDNIVNKGGLRNSLLIAPMPTASTSQIL--GNNE-CFEPY-TSNIYSRRVL---AGEF 662
Query: 615 RLLNKQIFETIYYGAL---EASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDW 671
++NKQ+ E + + E +I A G Q+ G P L +W + L D
Sbjct: 663 TIVNKQLLEDLMELGIWSPEMKNQIVAARGSIQSIGGIPDDLKELYKTVWEIRQRTLIDM 722
Query: 672 AA 673
AA
Sbjct: 723 AA 724
>UNIPROTKB|O15909 [details] [associations]
symbol:RNR1 "Ribonucleoside-diphosphate reductase large
subunit" species:5702 "Trypanosoma brucei brucei" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GO:GO:0009263 InterPro:IPR005144 PROSITE:PS51161
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506
EMBL:U80910 ProteinModelPortal:O15909 SMR:O15909
EuPathDB:TriTrypDB:Tb11.02.5720 EuPathDB:TriTrypDB:Tb427tmp.02.5720
Uniprot:O15909
Length = 838
Score = 1622 (576.0 bits), Expect = 9.7e-167, P = 9.7e-167
Identities = 305/494 (61%), Positives = 390/494 (78%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GAFAIYLEPWH DIF FL LKKNTGKE+ RARDLFYGLWIPD FM RVES W+LM
Sbjct: 303 RKGAFAIYLEPWHADIFGFLLLKKNTGKEDQRARDLFYGLWIPDLFMERVESHGTWTLMD 362
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PNT LSD +G++F DLY++YE EG+ +R + A++LWF IL+SQ+ETG P+MLYKDACN
Sbjct: 363 PNTAPFLSDCYGQEFTDLYERYEREGRGVRTIQAQELWFLILESQVETGVPFMLYKDACN 422
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAK 270
KSNQ+NLGTIKCSNLCTEIVEYTS+DEVAVCNLASIAL ++ D +++ LK+V K
Sbjct: 423 FKSNQKNLGTIKCSNLCTEIVEYTSRDEVAVCNLASIALPRFVK--DGAFDYVALKEVTK 480
Query: 271 IVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQI 330
+VT+NLN++ID N YPV EAR SN+RHRP+GIGVQGLAD F + LPF E++ LN+QI
Sbjct: 481 VVTRNLNRVIDRNHYPVCEARYSNLRHRPVGIGVQGLADAFALLSLPFAHPEAKKLNRQI 540
Query: 331 FETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMW-------GVTPTD------L 377
FETIY A+EAS E+A +DGPY+T++GSP S+G LQ+D+W G+ L
Sbjct: 541 FETIYIAAVEASTELAEKDGPYETFKGSPASEGKLQFDLWDEERRIRGMNEDSVHSHCGL 600
Query: 378 WDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVN 437
WDW +LKE++ K G+RNSLLIAPMPTAST+QILGNNE EP+TSNIY RRVLSGEF VVN
Sbjct: 601 WDWDSLKERVVKVGMRNSLLIAPMPTASTSQILGNNECIEPFTSNIYVRRVLSGEFPVVN 660
Query: 438 HHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADR 497
HL+++L+ L LW+D+M+ ++I NGS+ I+ IP+++++LYK VWEI QK ++DMAADR
Sbjct: 661 KHLVKELIRLRLWNDDMRRKIIALNGSVSGIKEIPERIRELYKVVWEIRQKDLIDMAADR 720
Query: 498 GAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMA 557
G +IDQSQSLN+++A ++++SMHF+ WK GLKTGMYYLR++PAA+AI+FT+D M
Sbjct: 721 GRYIDQSQSLNLFLATPTSSQLTSMHFYSWKKGLKTGMYYLRSQPAADAIKFTLDPKAMK 780
Query: 558 NAMASKDARSQEEI 571
+ D +S+EE+
Sbjct: 781 E-LPKPDKQSKEEV 793
Score = 644 (231.8 bits), Expect = 1.2e-94, Sum P(2) = 1.2e-94
Identities = 117/195 (60%), Positives = 159/195 (81%)
Query: 781 LWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVV 840
LWDW +LKE++ K G+RNSLLIAPMPTAST+QILGNNE EP+TSNIY RRVLSGEF VV
Sbjct: 600 LWDWDSLKERVVKVGMRNSLLIAPMPTASTSQILGNNECIEPFTSNIYVRRVLSGEFPVV 659
Query: 841 NHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAAD 900
N HL+++L+ L LW+D+M+ ++I NGS+ I+ IP+++++LYK VWEI QK ++DMAAD
Sbjct: 660 NKHLVKELIRLRLWNDDMRRKIIALNGSVSGIKEIPERIRELYKVVWEIRQKDLIDMAAD 719
Query: 901 RGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKM 960
RG +IDQSQSLN+++A ++++SMHF+ WK GLKTGMYYLR++PAA+AI+FT+D M
Sbjct: 720 RGRYIDQSQSLNLFLATPTSSQLTSMHFYSWKKGLKTGMYYLRSQPAADAIKFTLDPKAM 779
Query: 961 ANAMASKDTRSQEEI 975
+ D +S+EE+
Sbjct: 780 KE-LPKPDKQSKEEV 793
Score = 328 (120.5 bits), Expect = 1.2e-94, Sum P(2) = 1.2e-94
Identities = 61/86 (70%), Positives = 68/86 (79%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GAFAIYLEPWH DIF FL LKKNTGKE+ RARDLFYGLWIPD FM RVES W+LM
Sbjct: 303 RKGAFAIYLEPWHADIFGFLLLKKNTGKEDQRARDLFYGLWIPDLFMERVESHGTWTLMD 362
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEG 86
PN LSD +G++F DLY++YE EG
Sbjct: 363 PNTAPFLSDCYGQEFTDLYERYEREG 388
Score = 245 (91.3 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
Identities = 76/234 (32%), Positives = 118/234 (50%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
IGVQGLAD F + LPF E++ LN+QIFETIY A+EAS E+A +DGPY+T++GSP S
Sbjct: 512 IGVQGLADAFALLSLPFAHPEAKKLNRQIFETIYIAAVEASTELAEKDGPYETFKGSPAS 571
Query: 653 QGILQYDMW-------GVTPTD------LWDWAALKVLALVYGLKLWFAILDSQIETG-T 698
+G LQ+D+W G+ LWDW +LK + G++ ++L + + T T
Sbjct: 572 EGKLQFDLWDEERRIRGMNEDSVHSHCGLWDWDSLKERVVKVGMRN--SLLIAPMPTAST 629
Query: 699 PYMLYKDACNRK--SNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNAD-RLNSA 755
+L + C SN V+ + +VNK +I + + M+ LN +
Sbjct: 630 SQILGNNECIEPFTSNIYVRRVLSGEFPVVNKHLVKE--LIRLRLWNDDMRRKIIALNGS 687
Query: 756 IIYDRDFNYNFFGFKYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTAS 809
+ ++ +W + DL D AA + + +L +A PT+S
Sbjct: 688 VSGIKEIPERIRELYKVVWEIRQKDLIDMAADRGRYIDQSQSLNLFLAT-PTSS 740
Score = 150 (57.9 bits), Expect = 7.2e-76, Sum P(2) = 7.2e-76
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 659 DMWGVTPTDLWDWAAL--KVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNL 716
D +G TDL++ + + + +LWF IL+SQ+ETG P+MLYKDACN KSNQ+NL
Sbjct: 371 DCYGQEFTDLYERYEREGRGVRTIQAQELWFLILESQVETGVPFMLYKDACNFKSNQKNL 430
Query: 717 EVIE 720
I+
Sbjct: 431 GTIK 434
Score = 101 (40.6 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 19/65 (29%), Positives = 39/65 (60%)
Query: 706 ACNRKSNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIMKNADRLNSAIIYDRDFNYN 765
A ++ + + L+ L+ V++ T P+IS++ ++I K++ L I Y+RDF++
Sbjct: 90 ALHKTTTESVLDSFRVLHEHVSQATKRHAPLISEELWDIANKHSAALQQIINYERDFDFE 149
Query: 766 FFGFK 770
+FG+K
Sbjct: 150 YFGYK 154
>CGD|CAL0002354 [details] [associations]
symbol:RNR3 species:5476 "Candida albicans" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=NAS] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
UniPathway:UPA00326 CGD:CAL0002354 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 KO:K10807 InterPro:IPR005144 PROSITE:PS51161
eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 EMBL:AACQ01000235 EMBL:AACQ01000236
RefSeq:XP_710800.1 RefSeq:XP_710811.1 ProteinModelPortal:Q59M54
SMR:Q59M54 STRING:Q59M54 GeneID:3647580 GeneID:3647591
KEGG:cal:CaO19.13267 KEGG:cal:CaO19.5845 Uniprot:Q59M54
Length = 816
Score = 1599 (567.9 bits), Expect = 2.7e-164, P = 2.7e-164
Identities = 293/475 (61%), Positives = 375/475 (78%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIY+EPWHGDIFD LE++KN G EE R RDLFYGLWIPD FM+RV+ ++ W+L
Sbjct: 291 RPGAFAIYIEPWHGDIFDILEMRKNHGNEEMRTRDLFYGLWIPDLFMKRVKENSDWTLFS 350
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN GLSD +GE+F+ LY KYE+EG F +V A KLW AIL SQ ETG PYMLYKDACN
Sbjct: 351 PNEAVGLSDVYGEEFEKLYCKYESEG-FGTKVSAHKLWLAILHSQTETGGPYMLYKDACN 409
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKT--YNFTKLKDV 268
KSNQ+N+GTIK SNLC EIVEY+S E AVCNLAS+AL Y+ + ++F KL V
Sbjct: 410 TKSNQKNIGTIKSSNLCCEIVEYSSPKETAVCNLASLALPTYLKTTEDAIGFDFEKLHSV 469
Query: 269 AKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNK 328
K++T+NLN++IDV YPVE A SN RHRPI +GVQGLADLF ++RLPFD ++ LN
Sbjct: 470 TKVLTRNLNRVIDVTKYPVETAEYSNKRHRPIALGVQGLADLFAELRLPFDSAMAKTLNI 529
Query: 329 QIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIA 388
QIFETIY+ ALEAS E+A ++GPY+T++GSP S+GILQ+DMW P+ ++DW ALK+ I
Sbjct: 530 QIFETIYHAALEASVELAMKEGPYETFQGSPASKGILQFDMWKHKPSPMYDWHALKDNIQ 589
Query: 389 KHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELG 448
G+RNSLL+APMPTAST+QILG NE FEPYTSN+Y+RRVL+GE+Q+VN +L++DL++LG
Sbjct: 590 NFGLRNSLLVAPMPTASTSQILGFNECFEPYTSNLYNRRVLAGEYQIVNKYLIKDLMDLG 649
Query: 449 LWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLN 508
+WD M++++I+ NGSIQ+I IP ++K LYKTVWE+ QK ++DMAADRG F+DQSQS+N
Sbjct: 650 IWDSAMRNKIIMENGSIQNIPNIPDEIKQLYKTVWELSQKVIIDMAADRGKFVDQSQSMN 709
Query: 509 IYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASK 563
I++ K++S HF+ W+ GLKTGMYYLRT+ A+ AIQFT+D K A + +K
Sbjct: 710 IHLRNPTIGKLTSCHFYAWEKGLKTGMYYLRTQAASRAIQFTVD-AKEAEKVGTK 763
Score = 652 (234.6 bits), Expect = 1.7e-109, Sum P(3) = 1.7e-109
Identities = 115/198 (58%), Positives = 159/198 (80%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
++DMW P+ ++DW ALK+ I G+RNSLL+APMPTAST+QILG NE FEPYTSN+Y+
Sbjct: 567 QFDMWKHKPSPMYDWHALKDNIQNFGLRNSLLVAPMPTASTSQILGFNECFEPYTSNLYN 626
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVL+GE+Q+VN +L++DL++LG+WD M++++I+ NGSIQ+I IP ++K LYKTVWE+
Sbjct: 627 RRVLAGEYQIVNKYLIKDLMDLGIWDSAMRNKIIMENGSIQNIPNIPDEIKQLYKTVWEL 686
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QK ++DMAADRG F+DQSQS+NI++ K++S HF+ W+ GLKTGMYYLRT+ A+
Sbjct: 687 SQKVIIDMAADRGKFVDQSQSMNIHLRNPTIGKLTSCHFYAWEKGLKTGMYYLRTQAASR 746
Query: 950 AIQFTIDKTKMANAMASK 967
AIQFT+D K A + +K
Sbjct: 747 AIQFTVD-AKEAEKVGTK 763
Score = 335 (123.0 bits), Expect = 1.7e-109, Sum P(3) = 1.7e-109
Identities = 58/86 (67%), Positives = 70/86 (81%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIY+EPWHGDIFD LE++KN G EE R RDLFYGLWIPD FM+RV+ ++ W+L
Sbjct: 291 RPGAFAIYIEPWHGDIFDILEMRKNHGNEEMRTRDLFYGLWIPDLFMKRVKENSDWTLFS 350
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEG 86
PN GLSD +GE+F+ LY KYE+EG
Sbjct: 351 PNEAVGLSDVYGEEFEKLYCKYESEG 376
Score = 313 (115.2 bits), Expect = 3.9e-54, Sum P(2) = 3.9e-54
Identities = 75/195 (38%), Positives = 113/195 (57%)
Query: 537 YLRTKPAANAIQFTIDKTKMANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCIGVQ 596
YL+T +AI F +K + +++ I + A + ++ +GVQ
Sbjct: 451 YLKT--TEDAIGFDFEKLHSVTKVLTRNLN--RVIDVTKYPVETAEYSNKRHRPIALGVQ 506
Query: 597 GLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGIL 656
GLADLF ++RLPFD ++ LN QIFETIY+ ALEAS E+A ++GPY+T++GSP S+GIL
Sbjct: 507 GLADLFAELRLPFDSAMAKTLNIQIFETIYHAALEASVELAMKEGPYETFQGSPASKGIL 566
Query: 657 QYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETG-TPYMLYKDACNRK--SNQ 713
Q+DMW P+ ++DW ALK +GL+ ++L + + T T +L + C SN
Sbjct: 567 QFDMWKHKPSPMYDWHALKDNIQNFGLRN--SLLVAPMPTASTSQILGFNECFEPYTSNL 624
Query: 714 QNLEVIEELYNMVNK 728
N V+ Y +VNK
Sbjct: 625 YNRRVLAGEYQIVNK 639
Score = 144 (55.7 bits), Expect = 1.7e-109, Sum P(3) = 1.7e-109
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 684 KLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
KLW AIL SQ ETG PYMLYKDACN KSNQ+N+ I+
Sbjct: 385 KLWLAILHSQTETGGPYMLYKDACNTKSNQKNIGTIK 421
Score = 77 (32.2 bits), Expect = 4.3e-69, Sum P(2) = 4.3e-69
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 687 FAILDSQIETGTPYMLYKDACNRKSNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIM 746
+AIL +IET Y+ K E +E L +++ + +P IS Y+++
Sbjct: 73 YAILAGRIETRKLYL--------KVPYSFSENVERLRKYRPRKSNSYSP-ISSAFYKVVK 123
Query: 747 KNADRLNSAIIYDRDFNYNFFGFK 770
K+ + L+ I RD+N +FG K
Sbjct: 124 KHGEFLDKVIDKTRDYNLTYFGIK 147
>UNIPROTKB|Q59M54 [details] [associations]
symbol:RNR3 "Ribonucleoside-diphosphate reductase"
species:237561 "Candida albicans SC5314" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=NAS] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
UniPathway:UPA00326 CGD:CAL0002354 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 KO:K10807 InterPro:IPR005144 PROSITE:PS51161
eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 EMBL:AACQ01000235 EMBL:AACQ01000236
RefSeq:XP_710800.1 RefSeq:XP_710811.1 ProteinModelPortal:Q59M54
SMR:Q59M54 STRING:Q59M54 GeneID:3647580 GeneID:3647591
KEGG:cal:CaO19.13267 KEGG:cal:CaO19.5845 Uniprot:Q59M54
Length = 816
Score = 1599 (567.9 bits), Expect = 2.7e-164, P = 2.7e-164
Identities = 293/475 (61%), Positives = 375/475 (78%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
RPGAFAIY+EPWHGDIFD LE++KN G EE R RDLFYGLWIPD FM+RV+ ++ W+L
Sbjct: 291 RPGAFAIYIEPWHGDIFDILEMRKNHGNEEMRTRDLFYGLWIPDLFMKRVKENSDWTLFS 350
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACN 210
PN GLSD +GE+F+ LY KYE+EG F +V A KLW AIL SQ ETG PYMLYKDACN
Sbjct: 351 PNEAVGLSDVYGEEFEKLYCKYESEG-FGTKVSAHKLWLAILHSQTETGGPYMLYKDACN 409
Query: 211 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKT--YNFTKLKDV 268
KSNQ+N+GTIK SNLC EIVEY+S E AVCNLAS+AL Y+ + ++F KL V
Sbjct: 410 TKSNQKNIGTIKSSNLCCEIVEYSSPKETAVCNLASLALPTYLKTTEDAIGFDFEKLHSV 469
Query: 269 AKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNK 328
K++T+NLN++IDV YPVE A SN RHRPI +GVQGLADLF ++RLPFD ++ LN
Sbjct: 470 TKVLTRNLNRVIDVTKYPVETAEYSNKRHRPIALGVQGLADLFAELRLPFDSAMAKTLNI 529
Query: 329 QIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIA 388
QIFETIY+ ALEAS E+A ++GPY+T++GSP S+GILQ+DMW P+ ++DW ALK+ I
Sbjct: 530 QIFETIYHAALEASVELAMKEGPYETFQGSPASKGILQFDMWKHKPSPMYDWHALKDNIQ 589
Query: 389 KHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELG 448
G+RNSLL+APMPTAST+QILG NE FEPYTSN+Y+RRVL+GE+Q+VN +L++DL++LG
Sbjct: 590 NFGLRNSLLVAPMPTASTSQILGFNECFEPYTSNLYNRRVLAGEYQIVNKYLIKDLMDLG 649
Query: 449 LWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLN 508
+WD M++++I+ NGSIQ+I IP ++K LYKTVWE+ QK ++DMAADRG F+DQSQS+N
Sbjct: 650 IWDSAMRNKIIMENGSIQNIPNIPDEIKQLYKTVWELSQKVIIDMAADRGKFVDQSQSMN 709
Query: 509 IYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANAMASK 563
I++ K++S HF+ W+ GLKTGMYYLRT+ A+ AIQFT+D K A + +K
Sbjct: 710 IHLRNPTIGKLTSCHFYAWEKGLKTGMYYLRTQAASRAIQFTVD-AKEAEKVGTK 763
Score = 652 (234.6 bits), Expect = 1.7e-109, Sum P(3) = 1.7e-109
Identities = 115/198 (58%), Positives = 159/198 (80%)
Query: 770 KYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYS 829
++DMW P+ ++DW ALK+ I G+RNSLL+APMPTAST+QILG NE FEPYTSN+Y+
Sbjct: 567 QFDMWKHKPSPMYDWHALKDNIQNFGLRNSLLVAPMPTASTSQILGFNECFEPYTSNLYN 626
Query: 830 RRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI 889
RRVL+GE+Q+VN +L++DL++LG+WD M++++I+ NGSIQ+I IP ++K LYKTVWE+
Sbjct: 627 RRVLAGEYQIVNKYLIKDLMDLGIWDSAMRNKIIMENGSIQNIPNIPDEIKQLYKTVWEL 686
Query: 890 PQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
QK ++DMAADRG F+DQSQS+NI++ K++S HF+ W+ GLKTGMYYLRT+ A+
Sbjct: 687 SQKVIIDMAADRGKFVDQSQSMNIHLRNPTIGKLTSCHFYAWEKGLKTGMYYLRTQAASR 746
Query: 950 AIQFTIDKTKMANAMASK 967
AIQFT+D K A + +K
Sbjct: 747 AIQFTVD-AKEAEKVGTK 763
Score = 335 (123.0 bits), Expect = 1.7e-109, Sum P(3) = 1.7e-109
Identities = 58/86 (67%), Positives = 70/86 (81%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPGAFAIY+EPWHGDIFD LE++KN G EE R RDLFYGLWIPD FM+RV+ ++ W+L
Sbjct: 291 RPGAFAIYIEPWHGDIFDILEMRKNHGNEEMRTRDLFYGLWIPDLFMKRVKENSDWTLFS 350
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEG 86
PN GLSD +GE+F+ LY KYE+EG
Sbjct: 351 PNEAVGLSDVYGEEFEKLYCKYESEG 376
Score = 313 (115.2 bits), Expect = 3.9e-54, Sum P(2) = 3.9e-54
Identities = 75/195 (38%), Positives = 113/195 (57%)
Query: 537 YLRTKPAANAIQFTIDKTKMANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDCIGVQ 596
YL+T +AI F +K + +++ I + A + ++ +GVQ
Sbjct: 451 YLKT--TEDAIGFDFEKLHSVTKVLTRNLN--RVIDVTKYPVETAEYSNKRHRPIALGVQ 506
Query: 597 GLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGIL 656
GLADLF ++RLPFD ++ LN QIFETIY+ ALEAS E+A ++GPY+T++GSP S+GIL
Sbjct: 507 GLADLFAELRLPFDSAMAKTLNIQIFETIYHAALEASVELAMKEGPYETFQGSPASKGIL 566
Query: 657 QYDMWGVTPTDLWDWAALKVLALVYGLKLWFAILDSQIETG-TPYMLYKDACNRK--SNQ 713
Q+DMW P+ ++DW ALK +GL+ ++L + + T T +L + C SN
Sbjct: 567 QFDMWKHKPSPMYDWHALKDNIQNFGLRN--SLLVAPMPTASTSQILGFNECFEPYTSNL 624
Query: 714 QNLEVIEELYNMVNK 728
N V+ Y +VNK
Sbjct: 625 YNRRVLAGEYQIVNK 639
Score = 144 (55.7 bits), Expect = 1.7e-109, Sum P(3) = 1.7e-109
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 684 KLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIE 720
KLW AIL SQ ETG PYMLYKDACN KSNQ+N+ I+
Sbjct: 385 KLWLAILHSQTETGGPYMLYKDACNTKSNQKNIGTIK 421
Score = 77 (32.2 bits), Expect = 4.3e-69, Sum P(2) = 4.3e-69
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 687 FAILDSQIETGTPYMLYKDACNRKSNQQNLEVIEELYNMVNKETGTRTPMISDKHYEIIM 746
+AIL +IET Y+ K E +E L +++ + +P IS Y+++
Sbjct: 73 YAILAGRIETRKLYL--------KVPYSFSENVERLRKYRPRKSNSYSP-ISSAFYKVVK 123
Query: 747 KNADRLNSAIIYDRDFNYNFFGFK 770
K+ + L+ I RD+N +FG K
Sbjct: 124 KHGEFLDKVIDKTRDYNLTYFGIK 147
>UNIPROTKB|Q8SR37 [details] [associations]
symbol:ECU10_0920 "Ribonucleoside-diphosphate reductase
large chain" species:284813 "Encephalitozoon cuniculi GB-M1"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 GO:GO:0005524 GO:GO:0006260
GO:GO:0009263 KO:K10807 eggNOG:COG0209 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 HOGENOM:HOG000057035 TIGRFAMs:TIGR02506 OMA:YKYGVKT
EMBL:AL590449 RefSeq:NP_586207.1 ProteinModelPortal:Q8SR37
SMR:Q8SR37 STRING:Q8SR37 PRIDE:Q8SR37 GeneID:859856
GenomeReviews:AL590449_GR KEGG:ecu:ECU10_0920 Uniprot:Q8SR37
Length = 768
Score = 1550 (550.7 bits), Expect = 4.1e-159, P = 4.1e-159
Identities = 291/485 (60%), Positives = 378/485 (77%)
Query: 80 KKYEAEGLVYFRPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRR 139
K+Y +G RPG+ AI+LEPWH +IFDFLEL+KNTG EEFRARD+F LWI D FM R
Sbjct: 277 KRYINQGAER-RPGSIAIFLEPWHMEIFDFLELRKNTGPEEFRARDIFTALWINDLFMER 335
Query: 140 VESDAQWSLMCPNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQ--VPARKLWFAILDSQIE 197
V+++ +WSL CP+ GLSD WGE+F+ LY KYE K I + VPA+KLW AI+++QIE
Sbjct: 336 VKNNEEWSLFCPSQAVGLSDVWGEEFNALYCKYE---KTISRTVVPAQKLWKAIIEAQIE 392
Query: 198 TGTPYMLYKDACNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPAD 257
TGTPYM YKDACNR SNQQ+LGTIK SNLC EIVEY+S +E +VCNLASI L M++ D
Sbjct: 393 TGTPYMCYKDACNRLSNQQHLGTIKSSNLCAEIVEYSSGEETSVCNLASICLPMFVK--D 450
Query: 258 KTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLP 317
++F + V KI+T NLN++ID N+YPVEEAR SNMR+RPIGIGVQGLADLF +RL
Sbjct: 451 GWFDFEAFRRVVKILTVNLNRVIDFNYYPVEEARRSNMRNRPIGIGVQGLADLFAILRLA 510
Query: 318 FDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDL 377
F+ + +R LN+ IFE +YY A+EASCE+A ++GP+ +YEGSP+S+GI +++ G +
Sbjct: 511 FESDGARSLNQDIFEAMYYSAMEASCELAEKEGPFPSYEGSPISKGIFHFELAGRKASGN 570
Query: 378 WDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVN 437
WDW L+E+I +HGVRNSLLIA MPTA T+QI GNNE+FEP+ SNIY+RR +GEFQ+VN
Sbjct: 571 WDWEGLRERIRRHGVRNSLLIALMPTAGTSQIFGNNEAFEPHASNIYTRRTHAGEFQIVN 630
Query: 438 HHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADR 497
HL+ DLV LGLW MK+ +I N GSIQ+I IP +++++YKT WEI K+V+D+AADR
Sbjct: 631 QHLVNDLVRLGLWSYEMKNLVIENEGSIQNITSIPHEIREIYKTAWEIKMKSVIDLAADR 690
Query: 498 GAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMA 557
F+DQSQSLNI++A+ Y++++SMHF+G+ GLKTGMYYLRT+P +AI+FT+DK K+A
Sbjct: 691 QVFVDQSQSLNIFIAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVDK-KLA 749
Query: 558 NAMAS 562
S
Sbjct: 750 EKTLS 754
Score = 628 (226.1 bits), Expect = 5.0e-91, Sum P(2) = 5.0e-91
Identities = 114/202 (56%), Positives = 155/202 (76%)
Query: 769 FKYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIY 828
F +++ G + WDW L+E+I +HGVRNSLLIA MPTA T+QI GNNE+FEP+ SNIY
Sbjct: 558 FHFELAGRKASGNWDWEGLRERIRRHGVRNSLLIALMPTAGTSQIFGNNEAFEPHASNIY 617
Query: 829 SRRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWE 888
+RR +GEFQ+VN HL+ DLV LGLW MK+ +I N GSIQ+I IP +++++YKT WE
Sbjct: 618 TRRTHAGEFQIVNQHLVNDLVRLGLWSYEMKNLVIENEGSIQNITSIPHEIREIYKTAWE 677
Query: 889 IPQKTVLDMAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAA 948
I K+V+D+AADR F+DQSQSLNI++A+ Y++++SMHF+G+ GLKTGMYYLRT+P
Sbjct: 678 IKMKSVIDLAADRQVFVDQSQSLNIFIAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPIT 737
Query: 949 NAIQFTIDKTKMANAMAS-KDT 969
+AI+FT+DK ++S DT
Sbjct: 738 SAIKFTVDKKLAEKTLSSMNDT 759
Score = 311 (114.5 bits), Expect = 5.0e-91, Sum P(2) = 5.0e-91
Identities = 55/83 (66%), Positives = 67/83 (80%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
RPG+ AI+LEPWH +IFDFLEL+KNTG EEFRARD+F LWI D FM RV+++ +WSL C
Sbjct: 287 RPGSIAIFLEPWHMEIFDFLELRKNTGPEEFRARDIFTALWINDLFMERVKNNEEWSLFC 346
Query: 61 PNACRGLSDSWGEKFDDLYKKYE 83
P+ GLSD WGE+F+ LY KYE
Sbjct: 347 PSQAVGLSDVWGEEFNALYCKYE 369
Score = 248 (92.4 bits), Expect = 9.2e-45, Sum P(2) = 9.2e-45
Identities = 45/97 (46%), Positives = 68/97 (70%)
Query: 588 NKEDCIGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYE 647
N+ IGVQGLADLF +RL F+ + +R LN+ IFE +YY A+EASCE+A ++GP+ +YE
Sbjct: 490 NRPIGIGVQGLADLFAILRLAFESDGARSLNQDIFEAMYYSAMEASCELAEKEGPFPSYE 549
Query: 648 GSPVSQGILQYDMWGVTPTDLWDWAALKVLALVYGLK 684
GSP+S+GI +++ G + WDW L+ +G++
Sbjct: 550 GSPISKGIFHFELAGRKASGNWDWEGLRERIRRHGVR 586
Score = 153 (58.9 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 34/70 (48%), Positives = 44/70 (62%)
Query: 652 SQGILQYDMWGVTPTDLW-DWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRK 710
SQ + D+WG L+ + +V KLW AI+++QIETGTPYM YKDACNR
Sbjct: 348 SQAVGLSDVWGEEFNALYCKYEKTISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRL 407
Query: 711 SNQQNLEVIE 720
SNQQ+L I+
Sbjct: 408 SNQQHLGTIK 417
Score = 70 (29.7 bits), Expect = 1.3e-65, Sum P(2) = 1.3e-65
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 736 MISDKHYEIIMKNADRLNSAIIYDRDFNYNFFG 768
M+S++ Y II+++ + + I Y+ DF +++FG
Sbjct: 109 MVSEEMYGIILEHGETIEGMINYENDFLFSYFG 141
>UNIPROTKB|Q607W9 [details] [associations]
symbol:nrdA "Ribonucleoside-diphosphate reductase"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR005144 PROSITE:PS51161 GO:GO:0009265 KO:K00525
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 OMA:PQARNSN
TIGRFAMs:TIGR02506 HOGENOM:HOG000057036 ProtClustDB:PRK07207
RefSeq:YP_114078.1 ProteinModelPortal:Q607W9 GeneID:3104511
KEGG:mca:MCA1634 PATRIC:22607102 Uniprot:Q607W9
Length = 969
Score = 907 (324.3 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
Identities = 200/511 (39%), Positives = 298/511 (58%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA YLE WH DI +FL+L+KNTG + R D+ W+PD FM+RV + +W+L
Sbjct: 446 RKGAVCAYLETWHIDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMKRVAEEREWTLFS 505
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEG-----KFIRQVPARKLWFAILDSQIETGTPYMLY 205
PN L D G+ F+ Y++YEA+ K +++PA +LW +L ETG P++ +
Sbjct: 506 PNDTPDLHDLTGQSFERRYQEYEAKADRGEIKLYKRLPAVQLWRKMLSMLFETGHPWLAF 565
Query: 206 KDACNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKL 265
KD CN + Q+ G + SNLCTEI +T+ +E+AVCNL S+ L +I P D + KL
Sbjct: 566 KDPCNLRYTNQHAGVVHSSNLCTEITLHTNDNEIAVCNLGSVNLAAHITP-DGALDTEKL 624
Query: 266 KDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRL 325
+ + L+ +ID+N+Y V +AR SN+RHRP+G+G+ G D ++RLP+ E+
Sbjct: 625 QRTIATGMRMLDNVIDINYYSVPQARRSNLRHRPVGLGIMGFQDALYKLRLPYASQEAVA 684
Query: 326 LNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDM--------WGVTPTD- 376
E + Y A++ASC++AA G Y +++GS S+GIL D G D
Sbjct: 685 FADLSMEAVSYYAIQASCDLAAERGRYSSFDGSLWSRGILPIDSIALLEEGRGGYLQMDR 744
Query: 377 --LWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQ 434
DW AL+E++ G+RNS +A PTA+ + I G ++S EP N++ + LSGEF
Sbjct: 745 SQTLDWNALRERVRTVGMRNSNTMAIAPTATISNICGVSQSIEPTYQNLFVKSNLSGEFT 804
Query: 435 VVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMA 494
VVN +L+RDL LGLWD M + L +GS+Q IE IP+ LK LY T +EI + +++
Sbjct: 805 VVNPYLVRDLKTLGLWDAVMINDLKYYDGSVQKIERIPETLKQLYATAFEIDARWLIEAG 864
Query: 495 ADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKT 554
+ R ++DQ+QSLN+Y+AE + K+ +++ W GLKT YYLR+ A + + T
Sbjct: 865 SRRQKWLDQAQSLNLYLAEPSGKKLDTLYKLAWVRGLKT-TYYLRSLGATHVEKSTAFDG 923
Query: 555 KMANAMASK---DA----RSQEEIQADQEQA 578
K+ NA+ + DA R E + AD A
Sbjct: 924 KL-NAVKTDPIDDAIPGLRPLETVYADTRPA 953
Score = 349 (127.9 bits), Expect = 4.3e-52, Sum P(3) = 4.3e-52
Identities = 77/182 (42%), Positives = 116/182 (63%)
Query: 783 DWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNH 842
DW AL+E++ G+RNS +A PTA+ + I G ++S EP N++ + LSGEF VVN
Sbjct: 749 DWNALRERVRTVGMRNSNTMAIAPTATISNICGVSQSIEPTYQNLFVKSNLSGEFTVVNP 808
Query: 843 HLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRG 902
+L+RDL LGLWD M + L +GS+Q IE IP+ LK LY T +EI + +++ + R
Sbjct: 809 YLVRDLKTLGLWDAVMINDLKYYDGSVQKIERIPETLKQLYATAFEIDARWLIEAGSRRQ 868
Query: 903 AFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMAN 962
++DQ+QSLN+Y+AE + K+ +++ W GLKT YYLR+ A + + T K+ N
Sbjct: 869 KWLDQAQSLNLYLAEPSGKKLDTLYKLAWVRGLKT-TYYLRSLGATHVEKSTAFDGKL-N 926
Query: 963 AM 964
A+
Sbjct: 927 AV 928
Score = 207 (77.9 bits), Expect = 4.3e-52, Sum P(3) = 4.3e-52
Identities = 38/85 (44%), Positives = 53/85 (62%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA YLE WH DI +FL+L+KNTG + R D+ W+PD FM+RV + +W+L
Sbjct: 446 RKGAVCAYLETWHIDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMKRVAEEREWTLFS 505
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAE 85
PN L D G+ F+ Y++YEA+
Sbjct: 506 PNDTPDLHDLTGQSFERRYQEYEAK 530
Score = 123 (48.4 bits), Expect = 4.3e-52, Sum P(3) = 4.3e-52
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+G+ G D ++RLP+ E+ E + Y A++ASC++AA G Y +++GS S
Sbjct: 661 LGIMGFQDALYKLRLPYASQEAVAFADLSMEAVSYYAIQASCDLAAERGRYSSFDGSLWS 720
Query: 653 QGILQYD 659
+GIL D
Sbjct: 721 RGILPID 727
Score = 79 (32.9 bits), Expect = 1.7e-47, Sum P(3) = 1.7e-47
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 670 DWAALKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVI 719
D +K+ + ++LW +L ETG P++ +KD CN + Q+ V+
Sbjct: 532 DRGEIKLYKRLPAVQLWRKMLSMLFETGHPWLAFKDPCNLRYTNQHAGVV 581
Score = 50 (22.7 bits), Expect = 3.4e-94, Sum P(2) = 3.4e-94
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 23 KKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMCPNACRGLSD 69
K+N GK + A D+ + + D + +++ A+ + ACRGLSD
Sbjct: 133 KQNEGKAQGGAEDVVQ-VTLEDGTRKPLDT-ARLRHVVEEACRGLSD 177
Score = 49 (22.3 bits), Expect = 4.6e-28, Sum P(3) = 4.6e-28
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 743 EIIMKNADRLNSAIIYDRDFNYNFFGFK--YDMWGVTPTDL 781
E+ + RL A+ +RD +N+ G + YD + + D+
Sbjct: 274 ELARFDLQRLGEALKPERDLQFNYLGLQTLYDRYFIHSGDI 314
Score = 46 (21.3 bits), Expect = 2.5e-35, Sum P(3) = 2.5e-35
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 113 KKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMCPNTCRGLSD 159
K+N GK + A D+ + + D + +++ A+ + CRGLSD
Sbjct: 133 KQNEGKAQGGAEDVVQ-VTLEDGTRKPLDT-ARLRHVVEEACRGLSD 177
>UNIPROTKB|Q886B0 [details] [associations]
symbol:nrdA "Ribonucleoside-diphosphate reductase"
species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 EMBL:AE016853 GenomeReviews:AE016853_GR
InterPro:IPR005144 PROSITE:PS51161 GO:GO:0009265 eggNOG:COG0209
KO:K00525 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 OMA:PQARNSN
TIGRFAMs:TIGR02506 HOGENOM:HOG000057036 ProtClustDB:PRK07207
RefSeq:NP_791496.1 ProteinModelPortal:Q886B0 GeneID:1183308
KEGG:pst:PSPTO_1671 PATRIC:19994588
BioCyc:PSYR223283:GJIX-1701-MONOMER Uniprot:Q886B0
Length = 970
Score = 918 (328.2 bits), Expect = 5.4e-94, Sum P(2) = 5.4e-94
Identities = 199/490 (40%), Positives = 289/490 (58%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA YLE WH DI +F+EL+KNTG + R D+ WIPD FM+RV D W+L
Sbjct: 445 RKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGPWTLFS 504
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEA----EGK--FIRQVPARKLWFAILDSQIETGTPYML 204
P+ L D G+ F + Y+ YEA GK + + A+ LW +L ETG P++
Sbjct: 505 PSEVPDLHDLTGKAFQERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLT 564
Query: 205 YKDACNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTK 264
+KD CN +S QQ++G + SNLCTEI T+KDE+AVCNL SI L +I + + K
Sbjct: 565 FKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI--VNGKLDTDK 622
Query: 265 LKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESR 324
LK + + L+ +ID+N+Y V +ARNSN+RHRP+G+G+ G D +P+ + +
Sbjct: 623 LKRTIDVAVRMLDNVIDINYYSVPQARNSNLRHRPVGLGIMGFQDALYLQHIPYGSDAAV 682
Query: 325 LLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVT---------PT 375
E + Y A++ASC++A G Y+T++GS SQGIL D +
Sbjct: 683 QFADSSMEAVSYYAIQASCDLADERGAYETFQGSLWSQGILPLDSQQILIEQRGQKYIDV 742
Query: 376 DL---WDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGE 432
DL DWA ++ ++ K G+RNS ++A PTA+ A I G ++S EP N+Y + LSGE
Sbjct: 743 DLKESLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSGE 801
Query: 433 FQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLD 492
F V+N +L+RDL LWD M + L +GS+Q IE IPQ+LK+LY T +E+ K ++D
Sbjct: 802 FTVINPYLVRDLKARDLWDSVMINDLKYYDGSVQQIERIPQELKELYATAFEVDTKWIVD 861
Query: 493 MAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTID 552
A+ R +IDQ+QSLN+Y+A + K+ + W GLKT YYLR A + + T++
Sbjct: 862 AASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKT-TYYLRALAATSTEKSTVN 920
Query: 553 KTKMANAMAS 562
K+ NA++S
Sbjct: 921 TGKL-NAVSS 929
Score = 364 (133.2 bits), Expect = 3.4e-52, Sum P(3) = 3.4e-52
Identities = 79/184 (42%), Positives = 118/184 (64%)
Query: 783 DWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNH 842
DWA ++ ++ K G+RNS ++A PTA+ A I G ++S EP N+Y + LSGEF V+N
Sbjct: 749 DWAPVRARVQK-GIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSGEFTVINP 807
Query: 843 HLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRG 902
+L+RDL LWD M + L +GS+Q IE IPQ+LK+LY T +E+ K ++D A+ R
Sbjct: 808 YLVRDLKARDLWDSVMINDLKYYDGSVQQIERIPQELKELYATAFEVDTKWIVDAASRRQ 867
Query: 903 AFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMAN 962
+IDQ+QSLN+Y+A + K+ + W GLKT YYLR A + + T++ K+ N
Sbjct: 868 KWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKT-TYYLRALAATSTEKSTVNTGKL-N 925
Query: 963 AMAS 966
A++S
Sbjct: 926 AVSS 929
Score = 202 (76.2 bits), Expect = 3.4e-52, Sum P(3) = 3.4e-52
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA YLE WH DI +F+EL+KNTG + R D+ WIPD FM+RV D W+L
Sbjct: 445 RKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGPWTLFS 504
Query: 61 PNACRGLSDSWGEKFDDLYKKYEA 84
P+ L D G+ F + Y+ YEA
Sbjct: 505 PSEVPDLHDLTGKAFQERYEYYEA 528
Score = 113 (44.8 bits), Expect = 3.4e-52, Sum P(3) = 3.4e-52
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+G+ G D +P+ + + E + Y A++ASC++A G Y+T++GS S
Sbjct: 660 LGIMGFQDALYLQHIPYGSDAAVQFADSSMEAVSYYAIQASCDLADERGAYETFQGSLWS 719
Query: 653 QGILQYD 659
QGIL D
Sbjct: 720 QGILPLD 726
Score = 88 (36.0 bits), Expect = 8.8e-15, Sum P(3) = 8.8e-15
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 674 LKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVI 719
+K+ + LW +L ETG P++ +KD CN +S QQ++ V+
Sbjct: 536 VKLFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVV 581
Score = 37 (18.1 bits), Expect = 5.4e-94, Sum P(2) = 5.4e-94
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 794 HGVRNSLLIAPMPT 807
HG +S + AP PT
Sbjct: 932 HGPDDSAITAPRPT 945
Score = 37 (18.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 390 HGVRNSLLIAPMPT 403
HG +S + AP PT
Sbjct: 932 HGPDDSAITAPRPT 945
>UNIPROTKB|Q48FF6 [details] [associations]
symbol:nrdA "Ribonucleoside-diphosphate reductase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 EMBL:CP000058 GenomeReviews:CP000058_GR
InterPro:IPR005144 PROSITE:PS51161 GO:GO:0009265 eggNOG:COG0209
KO:K00525 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 OMA:PQARNSN
TIGRFAMs:TIGR02506 RefSeq:YP_275880.1 STRING:Q48FF6 GeneID:3557025
KEGG:psp:PSPPH_3738 PATRIC:19976913 HOGENOM:HOG000057036
ProtClustDB:PRK07207 Uniprot:Q48FF6
Length = 970
Score = 911 (325.7 bits), Expect = 3.0e-93, Sum P(2) = 3.0e-93
Identities = 197/490 (40%), Positives = 289/490 (58%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA YLE WH DI +F+EL+KNTG + R D+ WIPD FM+RV D W+L
Sbjct: 445 RKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGPWTLFS 504
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEA----EGK--FIRQVPARKLWFAILDSQIETGTPYML 204
P+ L D G+ F + Y+ YEA GK + + A+ LW +L ETG P++
Sbjct: 505 PSEVPDLHDLTGKAFQERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLT 564
Query: 205 YKDACNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTK 264
+KD CN +S QQ++G + SNLCTEI T+KDE+AVCNL SI L +I + + K
Sbjct: 565 FKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHI--VNGKLDTDK 622
Query: 265 LKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESR 324
LK + + L+ +ID+N+Y V +A+NSN+RHRP+G+G+ G D +P+ + +
Sbjct: 623 LKRTVDVAVRMLDNVIDINYYSVPQAKNSNLRHRPVGLGIMGFQDALYLQHIPYGSDAAV 682
Query: 325 LLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVT---------PT 375
E + Y A++ASC++A G Y+T++GS S+GIL D +
Sbjct: 683 QFADTSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGILPLDSQQILIEQRGEKYIDV 742
Query: 376 DL---WDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGE 432
DL DWA ++ ++ K G+RNS ++A PTA+ A I G ++S EP N+Y + LSGE
Sbjct: 743 DLKETLDWAPVRARVQK-GIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSGE 801
Query: 433 FQVVNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLD 492
F V+N +L+RDL LWD M + L +GS+Q IE IPQ+LK+LY T +E+ K ++D
Sbjct: 802 FTVINPYLVRDLKARDLWDSVMINDLKYYDGSVQQIERIPQELKELYATAFEVDTKWIVD 861
Query: 493 MAADRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTID 552
A+ R +IDQ+QSLN+Y+A + K+ + W GLKT YYLR A + + T++
Sbjct: 862 AASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKT-TYYLRALAATSTEKSTVN 920
Query: 553 KTKMANAMAS 562
K+ NA++S
Sbjct: 921 TGKL-NAVSS 929
Score = 364 (133.2 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 79/184 (42%), Positives = 118/184 (64%)
Query: 783 DWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNH 842
DWA ++ ++ K G+RNS ++A PTA+ A I G ++S EP N+Y + LSGEF V+N
Sbjct: 749 DWAPVRARVQK-GIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSGEFTVINP 807
Query: 843 HLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRG 902
+L+RDL LWD M + L +GS+Q IE IPQ+LK+LY T +E+ K ++D A+ R
Sbjct: 808 YLVRDLKARDLWDSVMINDLKYYDGSVQQIERIPQELKELYATAFEVDTKWIVDAASRRQ 867
Query: 903 AFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMAN 962
+IDQ+QSLN+Y+A + K+ + W GLKT YYLR A + + T++ K+ N
Sbjct: 868 KWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKT-TYYLRALAATSTEKSTVNTGKL-N 925
Query: 963 AMAS 966
A++S
Sbjct: 926 AVSS 929
Score = 202 (76.2 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA YLE WH DI +F+EL+KNTG + R D+ WIPD FM+RV D W+L
Sbjct: 445 RKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGPWTLFS 504
Query: 61 PNACRGLSDSWGEKFDDLYKKYEA 84
P+ L D G+ F + Y+ YEA
Sbjct: 505 PSEVPDLHDLTGKAFQERYEYYEA 528
Score = 108 (43.1 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+G+ G D +P+ + + E + Y A++ASC++A G Y+T++GS S
Sbjct: 660 LGIMGFQDALYLQHIPYGSDAAVQFADTSMEAVSYYAIQASCDLADERGAYETFQGSLWS 719
Query: 653 QGILQYD 659
+GIL D
Sbjct: 720 KGILPLD 726
Score = 88 (36.0 bits), Expect = 8.8e-15, Sum P(3) = 8.8e-15
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 674 LKVLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVI 719
+K+ + LW +L ETG P++ +KD CN +S QQ++ V+
Sbjct: 536 VKLFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVV 581
Score = 37 (18.1 bits), Expect = 3.0e-93, Sum P(2) = 3.0e-93
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 794 HGVRNSLLIAPMPT 807
HG +S + AP PT
Sbjct: 932 HGPDDSAITAPRPT 945
Score = 37 (18.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 390 HGVRNSLLIAPMPT 403
HG +S + AP PT
Sbjct: 932 HGPDDSAITAPRPT 945
>TIGR_CMR|CBU_1553 [details] [associations]
symbol:CBU_1553 "ribonucleoside-diphosphate reductase,
alpha subunit" species:227377 "Coxiella burnetii RSA 493"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013344
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477
GO:GO:0005524 GO:GO:0006260 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0031419 InterPro:IPR005144 PROSITE:PS51161 KO:K00525
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02504
OMA:PQARNSN TIGRFAMs:TIGR02506 HOGENOM:HOG000057036
ProtClustDB:PRK07207 RefSeq:NP_820536.1 ProteinModelPortal:Q83BF6
PRIDE:Q83BF6 GeneID:1209463 KEGG:cbu:CBU_1553 PATRIC:17931867
BioCyc:CBUR227377:GJ7S-1534-MONOMER Uniprot:Q83BF6
Length = 941
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 200/489 (40%), Positives = 287/489 (58%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA YLE WH DI +FL+L+KNTG + R D+ WIPD FM+RV D QW+L
Sbjct: 441 RKGAVCAYLETWHMDIEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVFEDGQWTLFS 500
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAE---GKF-IRQVPARKLWFAILDSQIETGTPYMLYK 206
P+ L D +GE F+ Y YE + G+ + + A LW IL ETG P++ +K
Sbjct: 501 PDEVPDLHDKFGEAFEIAYVAYEEKAHRGEIRSKTISALSLWRKILSMLFETGHPWVTFK 560
Query: 207 DACNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYINPADKTYNFTKLK 266
DACN +S QQ++G I SNLCTEI TS++E+AVCNL SI N+ + D + KL
Sbjct: 561 DACNIRSPQQHVGVIHSSNLCTEITLNTSREEIAVCNLGSI--NLVNHMKDGKLDTEKLA 618
Query: 267 DVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLL 326
K + L+ +ID+N+Y V +AR SN++HRPIG+G+ G D +P+ +
Sbjct: 619 RTTKTAIRMLDNVIDINYYSVPQARTSNLKHRPIGLGLMGFQDALYLQNIPYASEAAVQF 678
Query: 327 NKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTP----------TD 376
Q ETI Y A++AS E+A GPY+T+ S SQGIL D + TD
Sbjct: 679 ADQSMETISYYAIQASMELAKERGPYETFNNSLWSQGILPIDSIQLLKKSRGKYFEQNTD 738
Query: 377 -LWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQV 435
DW AL++++ HG+RNS ++A PTA+ + I G ++S EP N++ + LSGEF V
Sbjct: 739 QTLDWNALRKQVVAHGMRNSNVMAIAPTATISNICGISQSIEPTYQNLFVKSNLSGEFTV 798
Query: 436 VNHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAA 495
+N +L+R+L LWD+ M L NGS+Q I+ IP +LK LY T +E+ + +++ A+
Sbjct: 799 INPYLVRELKSRQLWDNVMVHDLKYYNGSVQKIDRIPAELKKLYATAFEVEPRWLVEAAS 858
Query: 496 DRGAFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTK 555
R +IDQ+QSLN+YMAE + K+ ++ W GLKT YYLR+ A + TI T
Sbjct: 859 RRQKWIDQAQSLNLYMAEPSGKKLDVLYRMAWLRGLKT-TYYLRSMGATGTEKATIHDTT 917
Query: 556 MANAMASKD 564
+ NA+ ++
Sbjct: 918 L-NAVTGQN 925
Score = 357 (130.7 bits), Expect = 3.2e-52, Sum P(3) = 3.2e-52
Identities = 76/186 (40%), Positives = 118/186 (63%)
Query: 783 DWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNH 842
DW AL++++ HG+RNS ++A PTA+ + I G ++S EP N++ + LSGEF V+N
Sbjct: 742 DWNALRKQVVAHGMRNSNVMAIAPTATISNICGISQSIEPTYQNLFVKSNLSGEFTVINP 801
Query: 843 HLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRG 902
+L+R+L LWD+ M L NGS+Q I+ IP +LK LY T +E+ + +++ A+ R
Sbjct: 802 YLVRELKSRQLWDNVMVHDLKYYNGSVQKIDRIPAELKKLYATAFEVEPRWLVEAASRRQ 861
Query: 903 AFIDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMAN 962
+IDQ+QSLN+YMAE + K+ ++ W GLKT YYLR+ A + TI T + N
Sbjct: 862 KWIDQAQSLNLYMAEPSGKKLDVLYRMAWLRGLKT-TYYLRSMGATGTEKATIHDTTL-N 919
Query: 963 AMASKD 968
A+ ++
Sbjct: 920 AVTGQN 925
Score = 208 (78.3 bits), Expect = 3.2e-52, Sum P(3) = 3.2e-52
Identities = 40/83 (48%), Positives = 50/83 (60%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA YLE WH DI +FL+L+KNTG + R D+ WIPD FM+RV D QW+L
Sbjct: 441 RKGAVCAYLETWHMDIEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVFEDGQWTLFS 500
Query: 61 PNACRGLSDSWGEKFDDLYKKYE 83
P+ L D +GE F+ Y YE
Sbjct: 501 PDEVPDLHDKFGEAFEIAYVAYE 523
Score = 114 (45.2 bits), Expect = 3.2e-52, Sum P(3) = 3.2e-52
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+G+ G D +P+ + Q ETI Y A++AS E+A GPY+T+ S S
Sbjct: 654 LGLMGFQDALYLQNIPYASEAAVQFADQSMETISYYAIQASMELAKERGPYETFNNSLWS 713
Query: 653 QGILQYD 659
QGIL D
Sbjct: 714 QGILPID 720
Score = 96 (38.9 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 680 VYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVI 719
+ L LW IL ETG P++ +KDACN +S QQ++ VI
Sbjct: 536 ISALSLWRKILSMLFETGHPWVTFKDACNIRSPQQHVGVI 575
>UNIPROTKB|Q5HXD4 [details] [associations]
symbol:nrdA "Ribonucleoside-diphosphate reductase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 EMBL:CP000025 GenomeReviews:CP000025_GR
InterPro:IPR005144 PROSITE:PS51161 GO:GO:0009265 eggNOG:COG0209
KO:K00525 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 RefSeq:YP_178051.1 ProteinModelPortal:Q5HXD4
STRING:Q5HXD4 GeneID:3230679 KEGG:cjr:CJE0024 PATRIC:20041737
HOGENOM:HOG000057034 OMA:RAHDLFP ProtClustDB:PRK08447
BioCyc:CJEJ195099:GJC0-23-MONOMER Uniprot:Q5HXD4
Length = 789
Score = 349 (127.9 bits), Expect = 3.5e-59, Sum P(4) = 3.5e-59
Identities = 65/145 (44%), Positives = 97/145 (66%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA A+Y+EPWH DI DF++L+KN+G+E RA +LF LWI D FM+RV ++ +W+L
Sbjct: 288 RKGAIAVYIEPWHMDISDFIDLRKNSGEERRRAHELFPALWINDLFMKRVRANDKWTLFD 347
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQ-VPARKLWFAILDSQIETGTPYMLYKDAC 209
P L D +GE F+ Y++YE + ++ V A++LW IL + ETG P++ +KD+
Sbjct: 348 PADTADLCDLYGEAFEKRYEEYEKDESITKEIVEAKELWKKILLNYFETGLPFLCFKDSA 407
Query: 210 NRKSNQQNLGTIKCSNLCTEIVEYT 234
NR + ++G I+ SNLCTEI + T
Sbjct: 408 NRANPNAHVGIIRSSNLCTEIFQNT 432
Score = 282 (104.3 bits), Expect = 3.5e-59, Sum P(4) = 3.5e-59
Identities = 76/228 (33%), Positives = 120/228 (52%)
Query: 230 IVE-YTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAKIVTKNLNKIIDVNFYPVE 288
IVE Y + + AVCNLASI L+ K Y ++ V + L+ +ID+NFYP
Sbjct: 483 IVEKYKNDGKTAVCNLASINLS-------KVYTKEDIERVVPTAIRMLDNVIDLNFYPHR 535
Query: 289 EARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNK--QIFETIYYGALEASCEIA 346
+ +++N++ R IG+GV G A + + ++ + +E LNK +I E I + A+ AS +A
Sbjct: 536 KVKDTNLKSRAIGLGVMGEAQMLAEAKIYWGSDEH--LNKIDEIMEQISFEAINASSNLA 593
Query: 347 ARDGPYQTYEGSPVSQGILQYDMW-----------GVTPTDLWDWAALKEKIAKHGVRNS 395
G Y+ +EGS S+GI D+ G+ DW L+EK+ K G+RN
Sbjct: 594 LEKGSYEDFEGSNWSKGIFPIDVASPKAKALTLREGLFDQSECDWVKLREKVKKDGMRNG 653
Query: 396 LLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRD 443
L+A PT+S + ++G ++ EP + + LSG VV +L D
Sbjct: 654 YLMAIAPTSSISILVGTTQTIEPVYKRKWFEQNLSGMIPVVVPNLSLD 701
Score = 229 (85.7 bits), Expect = 3.4e-46, Sum P(3) = 3.4e-46
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA A+Y+EPWH DI DF++L+KN+G+E RA +LF LWI D FM+RV ++ +W+L
Sbjct: 288 RKGAIAVYIEPWHMDISDFIDLRKNSGEERRRAHELFPALWINDLFMKRVRANDKWTLFD 347
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAE 85
P L D +GE F+ Y++YE +
Sbjct: 348 PADTADLCDLYGEAFEKRYEEYEKD 372
Score = 111 (44.1 bits), Expect = 3.5e-59, Sum P(4) = 3.5e-59
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 479 YKTVWEIPQKTVLDMAADRGAFIDQSQSLNIYMA--EINYAKMSSMHFHGWKLGLKTGMY 536
Y +E+ QK ++ AA RG +IDQ QSLNI+++ + + ++ ++ W+LG+K+ Y
Sbjct: 706 YTPAYELDQKILVKAAAVRGKWIDQGQSLNIFLSLDKASGGYLNEIYQLAWELGVKS-TY 764
Query: 537 YLRTK 541
YLR++
Sbjct: 765 YLRSE 769
Score = 111 (44.1 bits), Expect = 3.5e-59, Sum P(4) = 3.5e-59
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 883 YKTVWEIPQKTVLDMAADRGAFIDQSQSLNIYMA--EINYAKMSSMHFHGWKLGLKTGMY 940
Y +E+ QK ++ AA RG +IDQ QSLNI+++ + + ++ ++ W+LG+K+ Y
Sbjct: 706 YTPAYELDQKILVKAAAVRGKWIDQGQSLNIFLSLDKASGGYLNEIYQLAWELGVKS-TY 764
Query: 941 YLRTK 945
YLR++
Sbjct: 765 YLRSE 769
Score = 111 (44.1 bits), Expect = 3.3e-47, Sum P(5) = 3.3e-47
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 783 DWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNH 842
DW L+EK+ K G+RN L+A PT+S + ++G ++ EP + + LSG VV
Sbjct: 637 DWVKLREKVKKDGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKWFEQNLSGMIPVVVP 696
Query: 843 HLLRD 847
+L D
Sbjct: 697 NLSLD 701
Score = 99 (39.9 bits), Expect = 5.4e-33, Sum P(3) = 5.4e-33
Identities = 32/127 (25%), Positives = 59/127 (46%)
Query: 379 DWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNH 438
DW L+EK+ K G+RN L+A PT+S + ++G ++ EP + + LSG VV
Sbjct: 637 DWVKLREKVKKDGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKWFEQNLSGMIPVVVP 696
Query: 439 HLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQK----------------LKDLYKTV 482
+L D + + +++V +++ + I Q L ++Y+
Sbjct: 697 NLSLDTWQYYTPAYELDQKILVKAAAVRG-KWIDQGQSLNIFLSLDKASGGYLNEIYQLA 755
Query: 483 WEIPQKT 489
WE+ K+
Sbjct: 756 WELGVKS 762
Score = 95 (38.5 bits), Expect = 3.3e-47, Sum P(5) = 3.3e-47
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNK--QIFETIYYGALEASCEIAARDGPYQTYEGSP 650
+GV G A + + ++ + +E LNK +I E I + A+ AS +A G Y+ +EGS
Sbjct: 549 LGVMGEAQMLAEAKIYWGSDEH--LNKIDEIMEQISFEAINASSNLALEKGSYEDFEGSN 606
Query: 651 VSQGILQYDM 660
S+GI D+
Sbjct: 607 WSKGIFPIDV 616
Score = 79 (32.9 bits), Expect = 9.7e-32, Sum P(4) = 9.7e-32
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 679 LVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIEELYNMVNKETGTRTPMIS 738
+V +LW IL + ETG P++ +KD+ NR + ++ +I N+ + P
Sbjct: 379 IVEAKELWKKILLNYFETGLPFLCFKDSANRANPNAHVGIIRSS-NLCTEIFQNTEP--- 434
Query: 739 DKHYEI--IMKNADRLN 753
+Y+I + +N D L+
Sbjct: 435 -NYYQIKVVFENGDELH 450
Score = 44 (20.5 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 750 DRLNSAIIYDRDFNYNFFGFK--YDMW 774
D LN+ I +RD + + G K YD +
Sbjct: 122 DDLNAYIKPERDMQFTYLGIKTLYDRY 148
Score = 42 (19.8 bits), Expect = 3.5e-59, Sum P(4) = 3.5e-59
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 71 WGEKFDDLYKKYE 83
W +KF DL K+E
Sbjct: 182 WAKKFYDLISKFE 194
Score = 42 (19.8 bits), Expect = 9.1e-27, Sum P(3) = 9.1e-27
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 161 WGEKFDDLYKKYE 173
W +KF DL K+E
Sbjct: 182 WAKKFYDLISKFE 194
Score = 38 (18.4 bits), Expect = 2.3e-41, Sum P(5) = 2.3e-41
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 453 NMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQ 505
N L + GS +D EG K ++ P+ L + G F DQS+
Sbjct: 587 NASSNLALEKGSYEDFEGSNWS-KGIFPIDVASPKAKALTLR--EGLF-DQSE 635
Score = 38 (18.4 bits), Expect = 9.4e-40, Sum P(5) = 9.4e-40
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 863 IVNNGSIQDIEGIPQKLKDLYKTVW 887
I SI + G Q ++ +YK W
Sbjct: 658 IAPTSSISILVGTTQTIEPVYKRKW 682
Score = 38 (18.4 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 857 NMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQ 909
N L + GS +D EG K ++ P+ L + G F DQS+
Sbjct: 587 NASSNLALEKGSYEDFEGSNWS-KGIFPIDVASPKAKALTLR--EGLF-DQSE 635
>TIGR_CMR|CJE_0024 [details] [associations]
symbol:CJE_0024 "ribonucleoside-diphosphate reductase,
alpha subunit" species:195099 "Campylobacter jejuni RM1221"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 EMBL:CP000025 GenomeReviews:CP000025_GR
InterPro:IPR005144 PROSITE:PS51161 GO:GO:0009265 eggNOG:COG0209
KO:K00525 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 RefSeq:YP_178051.1 ProteinModelPortal:Q5HXD4
STRING:Q5HXD4 GeneID:3230679 KEGG:cjr:CJE0024 PATRIC:20041737
HOGENOM:HOG000057034 OMA:RAHDLFP ProtClustDB:PRK08447
BioCyc:CJEJ195099:GJC0-23-MONOMER Uniprot:Q5HXD4
Length = 789
Score = 349 (127.9 bits), Expect = 3.5e-59, Sum P(4) = 3.5e-59
Identities = 65/145 (44%), Positives = 97/145 (66%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA A+Y+EPWH DI DF++L+KN+G+E RA +LF LWI D FM+RV ++ +W+L
Sbjct: 288 RKGAIAVYIEPWHMDISDFIDLRKNSGEERRRAHELFPALWINDLFMKRVRANDKWTLFD 347
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQ-VPARKLWFAILDSQIETGTPYMLYKDAC 209
P L D +GE F+ Y++YE + ++ V A++LW IL + ETG P++ +KD+
Sbjct: 348 PADTADLCDLYGEAFEKRYEEYEKDESITKEIVEAKELWKKILLNYFETGLPFLCFKDSA 407
Query: 210 NRKSNQQNLGTIKCSNLCTEIVEYT 234
NR + ++G I+ SNLCTEI + T
Sbjct: 408 NRANPNAHVGIIRSSNLCTEIFQNT 432
Score = 282 (104.3 bits), Expect = 3.5e-59, Sum P(4) = 3.5e-59
Identities = 76/228 (33%), Positives = 120/228 (52%)
Query: 230 IVE-YTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAKIVTKNLNKIIDVNFYPVE 288
IVE Y + + AVCNLASI L+ K Y ++ V + L+ +ID+NFYP
Sbjct: 483 IVEKYKNDGKTAVCNLASINLS-------KVYTKEDIERVVPTAIRMLDNVIDLNFYPHR 535
Query: 289 EARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNK--QIFETIYYGALEASCEIA 346
+ +++N++ R IG+GV G A + + ++ + +E LNK +I E I + A+ AS +A
Sbjct: 536 KVKDTNLKSRAIGLGVMGEAQMLAEAKIYWGSDEH--LNKIDEIMEQISFEAINASSNLA 593
Query: 347 ARDGPYQTYEGSPVSQGILQYDMW-----------GVTPTDLWDWAALKEKIAKHGVRNS 395
G Y+ +EGS S+GI D+ G+ DW L+EK+ K G+RN
Sbjct: 594 LEKGSYEDFEGSNWSKGIFPIDVASPKAKALTLREGLFDQSECDWVKLREKVKKDGMRNG 653
Query: 396 LLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRD 443
L+A PT+S + ++G ++ EP + + LSG VV +L D
Sbjct: 654 YLMAIAPTSSISILVGTTQTIEPVYKRKWFEQNLSGMIPVVVPNLSLD 701
Score = 229 (85.7 bits), Expect = 3.4e-46, Sum P(3) = 3.4e-46
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA A+Y+EPWH DI DF++L+KN+G+E RA +LF LWI D FM+RV ++ +W+L
Sbjct: 288 RKGAIAVYIEPWHMDISDFIDLRKNSGEERRRAHELFPALWINDLFMKRVRANDKWTLFD 347
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAE 85
P L D +GE F+ Y++YE +
Sbjct: 348 PADTADLCDLYGEAFEKRYEEYEKD 372
Score = 111 (44.1 bits), Expect = 3.5e-59, Sum P(4) = 3.5e-59
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 479 YKTVWEIPQKTVLDMAADRGAFIDQSQSLNIYMA--EINYAKMSSMHFHGWKLGLKTGMY 536
Y +E+ QK ++ AA RG +IDQ QSLNI+++ + + ++ ++ W+LG+K+ Y
Sbjct: 706 YTPAYELDQKILVKAAAVRGKWIDQGQSLNIFLSLDKASGGYLNEIYQLAWELGVKS-TY 764
Query: 537 YLRTK 541
YLR++
Sbjct: 765 YLRSE 769
Score = 111 (44.1 bits), Expect = 3.5e-59, Sum P(4) = 3.5e-59
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 883 YKTVWEIPQKTVLDMAADRGAFIDQSQSLNIYMA--EINYAKMSSMHFHGWKLGLKTGMY 940
Y +E+ QK ++ AA RG +IDQ QSLNI+++ + + ++ ++ W+LG+K+ Y
Sbjct: 706 YTPAYELDQKILVKAAAVRGKWIDQGQSLNIFLSLDKASGGYLNEIYQLAWELGVKS-TY 764
Query: 941 YLRTK 945
YLR++
Sbjct: 765 YLRSE 769
Score = 111 (44.1 bits), Expect = 3.3e-47, Sum P(5) = 3.3e-47
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 783 DWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNH 842
DW L+EK+ K G+RN L+A PT+S + ++G ++ EP + + LSG VV
Sbjct: 637 DWVKLREKVKKDGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKWFEQNLSGMIPVVVP 696
Query: 843 HLLRD 847
+L D
Sbjct: 697 NLSLD 701
Score = 99 (39.9 bits), Expect = 5.4e-33, Sum P(3) = 5.4e-33
Identities = 32/127 (25%), Positives = 59/127 (46%)
Query: 379 DWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNH 438
DW L+EK+ K G+RN L+A PT+S + ++G ++ EP + + LSG VV
Sbjct: 637 DWVKLREKVKKDGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKWFEQNLSGMIPVVVP 696
Query: 439 HLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQK----------------LKDLYKTV 482
+L D + + +++V +++ + I Q L ++Y+
Sbjct: 697 NLSLDTWQYYTPAYELDQKILVKAAAVRG-KWIDQGQSLNIFLSLDKASGGYLNEIYQLA 755
Query: 483 WEIPQKT 489
WE+ K+
Sbjct: 756 WELGVKS 762
Score = 95 (38.5 bits), Expect = 3.3e-47, Sum P(5) = 3.3e-47
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNK--QIFETIYYGALEASCEIAARDGPYQTYEGSP 650
+GV G A + + ++ + +E LNK +I E I + A+ AS +A G Y+ +EGS
Sbjct: 549 LGVMGEAQMLAEAKIYWGSDEH--LNKIDEIMEQISFEAINASSNLALEKGSYEDFEGSN 606
Query: 651 VSQGILQYDM 660
S+GI D+
Sbjct: 607 WSKGIFPIDV 616
Score = 79 (32.9 bits), Expect = 9.7e-32, Sum P(4) = 9.7e-32
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 679 LVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIEELYNMVNKETGTRTPMIS 738
+V +LW IL + ETG P++ +KD+ NR + ++ +I N+ + P
Sbjct: 379 IVEAKELWKKILLNYFETGLPFLCFKDSANRANPNAHVGIIRSS-NLCTEIFQNTEP--- 434
Query: 739 DKHYEI--IMKNADRLN 753
+Y+I + +N D L+
Sbjct: 435 -NYYQIKVVFENGDELH 450
Score = 44 (20.5 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 750 DRLNSAIIYDRDFNYNFFGFK--YDMW 774
D LN+ I +RD + + G K YD +
Sbjct: 122 DDLNAYIKPERDMQFTYLGIKTLYDRY 148
Score = 42 (19.8 bits), Expect = 3.5e-59, Sum P(4) = 3.5e-59
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 71 WGEKFDDLYKKYE 83
W +KF DL K+E
Sbjct: 182 WAKKFYDLISKFE 194
Score = 42 (19.8 bits), Expect = 9.1e-27, Sum P(3) = 9.1e-27
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 161 WGEKFDDLYKKYE 173
W +KF DL K+E
Sbjct: 182 WAKKFYDLISKFE 194
Score = 38 (18.4 bits), Expect = 2.3e-41, Sum P(5) = 2.3e-41
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 453 NMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQ 505
N L + GS +D EG K ++ P+ L + G F DQS+
Sbjct: 587 NASSNLALEKGSYEDFEGSNWS-KGIFPIDVASPKAKALTLR--EGLF-DQSE 635
Score = 38 (18.4 bits), Expect = 9.4e-40, Sum P(5) = 9.4e-40
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 863 IVNNGSIQDIEGIPQKLKDLYKTVW 887
I SI + G Q ++ +YK W
Sbjct: 658 IAPTSSISILVGTTQTIEPVYKRKW 682
Score = 38 (18.4 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 857 NMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQ 909
N L + GS +D EG K ++ P+ L + G F DQS+
Sbjct: 587 NASSNLALEKGSYEDFEGSNWS-KGIFPIDVASPKAKALTLR--EGLF-DQSE 635
>TIGR_CMR|NSE_0411 [details] [associations]
symbol:NSE_0411 "ribonucleoside-diphosphate reductase,
alpha subunit" species:222891 "Neorickettsia sennetsu str.
Miyayama" [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=ISS]
[GO:0009265 "2'-deoxyribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
UniPathway:UPA00326 GO:GO:0005524 GO:GO:0006260 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0209 KO:K00525 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 RefSeq:YP_506298.1 STRING:Q2GDZ8
GeneID:3932191 KEGG:nse:NSE_0411 PATRIC:22680881
HOGENOM:HOG000064500 OMA:EWDLISP ProtClustDB:PRK09102
BioCyc:NSEN222891:GHFU-434-MONOMER Uniprot:Q2GDZ8
Length = 605
Score = 280 (103.6 bits), Expect = 2.8e-45, Sum P(3) = 2.8e-45
Identities = 59/155 (38%), Positives = 98/155 (63%)
Query: 398 IAPMPTASTAQILGNNE-SFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLWDDNMKD 456
IA PTAS + I GN EPY +N+++++ LSG F V N HL L G D +
Sbjct: 429 IAVAPTASISIIAGNTSPGIEPYAANVFTQKTLSGSFVVKNKHLAALLERKGKNTDCVWS 488
Query: 457 QLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIYM-AEIN 515
+I N GS+Q ++ + + K +++T +E+ Q+ V+++AADR +I QSQS+N+++ + I+
Sbjct: 489 SIISNEGSVQHLDFLDENEKMVFRTAYEMDQRWVIELAADRTPYICQSQSVNLFLHSNIH 548
Query: 516 YAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFT 550
++S++HF GWK GLK+ +YY R+K A + +
Sbjct: 549 KKELSNLHFLGWKKGLKS-LYYCRSKSIQRAYKIS 582
Score = 280 (103.6 bits), Expect = 2.8e-45, Sum P(3) = 2.8e-45
Identities = 59/155 (38%), Positives = 98/155 (63%)
Query: 802 IAPMPTASTAQILGNNE-SFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLWDDNMKD 860
IA PTAS + I GN EPY +N+++++ LSG F V N HL L G D +
Sbjct: 429 IAVAPTASISIIAGNTSPGIEPYAANVFTQKTLSGSFVVKNKHLAALLERKGKNTDCVWS 488
Query: 861 QLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIYM-AEIN 919
+I N GS+Q ++ + + K +++T +E+ Q+ V+++AADR +I QSQS+N+++ + I+
Sbjct: 489 SIISNEGSVQHLDFLDENEKMVFRTAYEMDQRWVIELAADRTPYICQSQSVNLFLHSNIH 548
Query: 920 YAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFT 954
++S++HF GWK GLK+ +YY R+K A + +
Sbjct: 549 KKELSNLHFLGWKKGLKS-LYYCRSKSIQRAYKIS 582
Score = 213 (80.0 bits), Expect = 2.8e-45, Sum P(3) = 2.8e-45
Identities = 63/186 (33%), Positives = 97/186 (52%)
Query: 175 EGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACNRKSNQ--QNLGT-IKCSNLCTEIV 231
+G I V AR +W IL +++ETG PY+L+ D R +NL +K SNLC+EI
Sbjct: 231 DGSVIATVGARGIWIRILTARLETGEPYILFIDTVQRLRPDVYKNLNLDVKMSNLCSEIT 290
Query: 232 EYTSKDEV-----AVCNLASIALNMYINPADKTYNFTKLKDVAKIVTKNLNKIIDVNFYP 286
T KD + A+C L+S+ L + + +N ++DV + L I
Sbjct: 291 LTTGKDHLDNHRTAICCLSSLNLEKF---DEWEHNEQFVRDVMHFLDNVLEDFIRKAPDC 347
Query: 287 VEEARNSNMRHRPIGIGVQGLADLFIQMR-LPFDCNESRLLNKQIFETIYYGALEASCEI 345
+ AR S MR R IG+GV G F+Q + +PF+ ++ +N +IF+ I + A + S E+
Sbjct: 348 MHRARYSAMRERSIGLGVMGFHS-FLQSKGIPFESAIAKSVNLKIFKKIKHEADKISKEM 406
Query: 346 AARDGP 351
A GP
Sbjct: 407 ALERGP 412
Score = 113 (44.8 bits), Expect = 2.8e-45, Sum P(3) = 2.8e-45
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFR-ARDLFYGLWIPDEFMRRVESDAQWSLM 59
R G+ A+YL H +I +F++L+K TG + R A +L + + I D+FM+ V D +W L+
Sbjct: 168 RRGSSAVYLPVNHPEIIEFIDLRKPTGGDPNRKALNLHHAVVINDDFMKAVLEDKEWDLI 227
Query: 60 CP 61
P
Sbjct: 228 SP 229
Score = 113 (44.8 bits), Expect = 2.8e-45, Sum P(3) = 2.8e-45
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFR-ARDLFYGLWIPDEFMRRVESDAQWSLM 149
R G+ A+YL H +I +F++L+K TG + R A +L + + I D+FM+ V D +W L+
Sbjct: 168 RRGSSAVYLPVNHPEIIEFIDLRKPTGGDPNRKALNLHHAVVINDDFMKAVLEDKEWDLI 227
Query: 150 CP 151
P
Sbjct: 228 SP 229
Score = 83 (34.3 bits), Expect = 9.3e-32, Sum P(3) = 9.3e-32
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 669 WDWAALK---VLALVYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQ--QNLEVIEELY 723
WD + K V+A V +W IL +++ETG PY+L+ D R +NL + ++
Sbjct: 224 WDLISPKDGSVIATVGARGIWIRILTARLETGEPYILFIDTVQRLRPDVYKNLNLDVKMS 283
Query: 724 NMVNKETGTRTPMISDKH 741
N+ ++ T T D H
Sbjct: 284 NLCSEITLTTGKDHLDNH 301
Score = 63 (27.2 bits), Expect = 1.1e-29, Sum P(3) = 1.1e-29
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 593 IGVQGLADLFIQMR-LPFDCNESRLLNKQIFETIYYGALEASCEIAARDGP 642
+GV G F+Q + +PF+ ++ +N +IF+ I + A + S E+A GP
Sbjct: 363 LGVMGFHS-FLQSKGIPFESAIAKSVNLKIFKKIKHEADKISKEMALERGP 412
Score = 41 (19.5 bits), Expect = 2.6e-24, Sum P(3) = 2.6e-24
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 226 LCTEIVEYTSKDEVAVCNLASIALNMYINPA 256
L + +Y S D C L N++ PA
Sbjct: 49 LFARVAKYYSDDPKHACRLYDYMSNLWFMPA 79
>UNIPROTKB|Q71XL1 [details] [associations]
symbol:nrdA "Ribonucleoside-diphosphate reductase"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0009265 "2'-deoxyribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 PROSITE:PS00089 UniPathway:UPA00326 GO:GO:0005524
GO:GO:0006260 EMBL:AE017262 GenomeReviews:AE017262_GR
InterPro:IPR005144 PROSITE:PS51161 GO:GO:0009265 eggNOG:COG0209
KO:K00525 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 HOGENOM:HOG000057034 RefSeq:YP_014777.1
ProteinModelPortal:Q71XL1 STRING:Q71XL1 GeneID:2798407
KEGG:lmf:LMOf2365_2187 PATRIC:20325695 OMA:RTHDLFT
ProtClustDB:PRK09209 Uniprot:Q71XL1
Length = 763
Score = 314 (115.6 bits), Expect = 3.1e-39, Sum P(3) = 3.1e-39
Identities = 84/281 (29%), Positives = 144/281 (51%)
Query: 163 EKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLGTIK 222
EK+++L K ++ + K I+ SQ+ETG P+M Y+D NR + ++ G +
Sbjct: 396 EKYEELVADETISKKIVKAIDIMK---RIMMSQLETGNPFMFYRDEVNRMNPNKHEGMVY 452
Query: 223 CSNLCTEIV----------EYTSKDEVA---------VCNLASIALNMYINPADKTYNFT 263
SNLCTEI+ E S D++ VCNL+S+ L + + T
Sbjct: 453 SSNLCTEIMQNMSPTKMIQEIISGDQIVITKQAGDFVVCNLSSVNLGRAVVAEEGT---- 508
Query: 264 KLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLPFDCNES 323
L+ + ++ + L+ +ID+N PV +A +N ++R IG+G G L + +D E+
Sbjct: 509 -LERLIEVEVRMLDNVIDLNELPVPQATITNQKYRSIGLGTFGWHHLLALKNIAWDSEEA 567
Query: 324 RLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLWDWAAL 383
+++E I Y A+ AS ++A G Y+ ++GS + G +Y + + +W L
Sbjct: 568 EKYADELYEQINYLAIRASNKLAQEKGAYKVFKGSDWNTG--EY--FARRNYNSPEWQEL 623
Query: 384 KEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIY 424
+++A+ G+RN+ L+A P STAQI G+ S +P S Y
Sbjct: 624 AKEVAEKGLRNAYLVAVAPNMSTAQIAGSTASIDPIYSAFY 664
Score = 241 (89.9 bits), Expect = 1.8e-28, Sum P(5) = 1.8e-28
Identities = 57/156 (36%), Positives = 86/156 (55%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA A+YL+ +H DI FL+L+ N G + RA D+F + IPD FM VE +W L
Sbjct: 310 RKGAIAVYLDVFHKDIESFLDLRLNNGDQRLRAHDVFTAVCIPDIFMEAVERRGEWYLFD 369
Query: 151 PNTCRG-----LSDSWGEK-----FDDLYKKYEAEGKFIRQ-VPARKLWFAILDSQIETG 199
P+ + L D + E F + Y++ A+ ++ V A + I+ SQ+ETG
Sbjct: 370 PHEVKAKKGWYLQDFYDESKGEGTFREKYEELVADETISKKIVKAIDIMKRIMMSQLETG 429
Query: 200 TPYMLYKDACNRKSNQQNLGTIKCSNLCTEIVEYTS 235
P+M Y+D NR + ++ G + SNLCTEI++ S
Sbjct: 430 NPFMFYRDEVNRMNPNKHEGMVYSSNLCTEIMQNMS 465
Score = 155 (59.6 bits), Expect = 3.1e-39, Sum P(3) = 3.1e-39
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA A+YL+ +H DI FL+L+ N G + RA D+F + IPD FM VE +W L
Sbjct: 310 RKGAIAVYLDVFHKDIESFLDLRLNNGDQRLRAHDVFTAVCIPDIFMEAVERRGEWYLFD 369
Query: 61 PNACRGLSDSWGEKFDDLYKKYEAEG 86
P+ + W D Y + + EG
Sbjct: 370 PHEVKA-KKGW--YLQDFYDESKGEG 392
Score = 101 (40.6 bits), Expect = 1.8e-28, Sum P(5) = 1.8e-28
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 783 DWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIY 828
+W L +++A+ G+RN+ L+A P STAQI G+ S +P S Y
Sbjct: 619 EWQELAKEVAEKGLRNAYLVAVAPNMSTAQIAGSTASIDPIYSAFY 664
Score = 83 (34.3 bits), Expect = 3.1e-39, Sum P(3) = 3.1e-39
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 480 KTVWEIPQKTVLDMAADRGAFIDQSQSLNIYMAE-INYAKMSSMHFHGWKLGLKTGMYYL 538
K +++ Q + R +DQS S N Y+ I +K+ +H W GLKT YY+
Sbjct: 690 KGAYKVDQFASVRQNGRRQRHVDQSLSFNFYVPSGIKASKLLELHMTAWNEGLKT-TYYV 748
Query: 539 RT 540
R+
Sbjct: 749 RS 750
Score = 83 (34.3 bits), Expect = 3.1e-39, Sum P(3) = 3.1e-39
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 884 KTVWEIPQKTVLDMAADRGAFIDQSQSLNIYMAE-INYAKMSSMHFHGWKLGLKTGMYYL 942
K +++ Q + R +DQS S N Y+ I +K+ +H W GLKT YY+
Sbjct: 690 KGAYKVDQFASVRQNGRRQRHVDQSLSFNFYVPSGIKASKLLELHMTAWNEGLKT-TYYV 748
Query: 943 RT 944
R+
Sbjct: 749 RS 750
Score = 74 (31.1 bits), Expect = 1.8e-28, Sum P(5) = 1.8e-28
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+G G L + +D E+ +++E I Y A+ AS ++A G Y+ ++GS +
Sbjct: 546 LGTFGWHHLLALKNIAWDSEEAEKYADELYEQINYLAIRASNKLAQEKGAYKVFKGSDWN 605
Query: 653 QG 654
G
Sbjct: 606 TG 607
Score = 71 (30.1 bits), Expect = 4.9e-19, Sum P(4) = 4.9e-19
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 679 LVYGLKLWFAILDSQIETGTPYMLYKDACNR 709
+V + + I+ SQ+ETG P+M Y+D NR
Sbjct: 411 IVKAIDIMKRIMMSQLETGNPFMFYRDEVNR 441
Score = 59 (25.8 bits), Expect = 3.7e-09, Sum P(5) = 3.7e-09
Identities = 22/94 (23%), Positives = 42/94 (44%)
Query: 404 ASTAQILGNNESFEPYTS---NIYSRRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIV 460
AS + +++ + Y ++ R + SG ++ ++ DL+ G D KD+L
Sbjct: 100 ASKNRFYNDDDKYGSYVGLQESLGERGIYSGN--ILKNYSKEDLIAAGKLIDPEKDKLFT 157
Query: 461 NNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMA 494
NG + D + V+E+PQ+ L +A
Sbjct: 158 YNGLY--LLATRYLATDSERNVYELPQERWLTIA 189
Score = 37 (18.1 bits), Expect = 1.8e-28, Sum P(5) = 1.8e-28
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 9 LEPWHGDIFDFLELKKNTGKEE 30
LE + +F+F+E K++ +E
Sbjct: 43 LEDYKRKVFNFVEKKEDYAADE 64
Score = 37 (18.1 bits), Expect = 5.4e-27, Sum P(3) = 5.4e-27
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 99 LEPWHGDIFDFLELKKNTGKEE 120
LE + +F+F+E K++ +E
Sbjct: 43 LEDYKRKVFNFVEKKEDYAADE 64
>TIGR_CMR|ECH_0459 [details] [associations]
symbol:ECH_0459 "ribonucleoside-diphosphate reductase,
alpha subunit" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
UniPathway:UPA00326 GO:GO:0005524 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006260 eggNOG:COG0209 KO:K00525
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506
HOGENOM:HOG000064500 ProtClustDB:PRK09102 RefSeq:YP_507276.1
STRING:Q2GH07 GeneID:3927177 KEGG:ech:ECH_0459 PATRIC:20576390
OMA:GALEKSI BioCyc:ECHA205920:GJNR-460-MONOMER Uniprot:Q2GH07
Length = 595
Score = 243 (90.6 bits), Expect = 5.4e-37, Sum P(2) = 5.4e-37
Identities = 86/270 (31%), Positives = 125/270 (46%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R G+ A+YL WH +I +FL+L+K TG + P+ + S
Sbjct: 155 RRGSSAVYLPVWHPEIEEFLDLRKPTGGD-------------PNRKALNIHHGVVLSNKF 201
Query: 151 PNTCRGLSDSWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDAC- 209
C + W DL + F + AR +W IL +++ETG PY+L+ D
Sbjct: 202 MK-CVENDEPW-----DLISPKDQSVLFT--IKARDIWIKILTTRVETGEPYILFIDQVD 253
Query: 210 NRKSN---QQNLGTIKCSNLCTEIV-----EYTSKDEVAVCNLASIALNMYINPADKTYN 261
N K + NL IK SNLCTEI ++ +K A+C LAS+ L Y D N
Sbjct: 254 NNKPEIYKRLNLD-IKMSNLCTEITLTTGYDHLNKSRTAICCLASLNLEYYEQWKD---N 309
Query: 262 FTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRL-PFDC 320
++DV + + L I+ +E A+ S MR R IG+GV G F+Q ++ PF+
Sbjct: 310 SLFIEDVMRFLDNVLTDFIEKAPSEMERAKYSAMRERSIGVGVMGFHS-FLQSKMIPFES 368
Query: 321 NESRLLNKQIFETIYYGALEASCEIAARDG 350
+ + NK+IF I A AS IA G
Sbjct: 369 VAATIWNKKIFSHIRKHADAASYNIAMEKG 398
Score = 241 (89.9 bits), Expect = 5.4e-37, Sum P(2) = 5.4e-37
Identities = 52/156 (33%), Positives = 96/156 (61%)
Query: 394 NSLLIAPMPTASTAQILGNNE-SFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVEL-GLWD 451
N L IAP TAS + I GN EPY +N+++ + L+G F +V + L+ L++L G +
Sbjct: 414 NKLSIAP--TASISIIAGNTSPGIEPYAANVFTHKTLTGSF-IVRNKFLQKLLKLKGKDN 470
Query: 452 DNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIYM 511
+ + + N GS+Q ++ + ++ K ++KT +E+ Q+ +++ +DR +I Q+QS+NI++
Sbjct: 471 EQVWSSISTNEGSVQHLDFLTEEEKLIFKTAYELDQRWIIEHTSDRSKYICQAQSVNIFL 530
Query: 512 -AEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANA 546
A ++ + +HF W+ GLK+ +YY R+K A
Sbjct: 531 PANVHKRYLHKIHFLAWRKGLKS-LYYCRSKSIQRA 565
Score = 241 (89.9 bits), Expect = 5.4e-37, Sum P(2) = 5.4e-37
Identities = 52/156 (33%), Positives = 96/156 (61%)
Query: 798 NSLLIAPMPTASTAQILGNNE-SFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVEL-GLWD 855
N L IAP TAS + I GN EPY +N+++ + L+G F +V + L+ L++L G +
Sbjct: 414 NKLSIAP--TASISIIAGNTSPGIEPYAANVFTHKTLTGSF-IVRNKFLQKLLKLKGKDN 470
Query: 856 DNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIYM 915
+ + + N GS+Q ++ + ++ K ++KT +E+ Q+ +++ +DR +I Q+QS+NI++
Sbjct: 471 EQVWSSISTNEGSVQHLDFLTEEEKLIFKTAYELDQRWIIEHTSDRSKYICQAQSVNIFL 530
Query: 916 -AEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANA 950
A ++ + +HF W+ GLK+ +YY R+K A
Sbjct: 531 PANVHKRYLHKIHFLAWRKGLKS-LYYCRSKSIQRA 565
Score = 128 (50.1 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFR-ARDLFYGLWIPDEFMRRVESDAQWSLM 59
R G+ A+YL WH +I +FL+L+K TG + R A ++ +G+ + ++FM+ VE+D W L+
Sbjct: 155 RRGSSAVYLPVWHPEIEEFLDLRKPTGGDPNRKALNIHHGVVLSNKFMKCVENDEPWDLI 214
Query: 60 CP 61
P
Sbjct: 215 SP 216
Score = 77 (32.2 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 669 WDWAALKVLALVYGLK---LWFAILDSQIETGTPYMLYKDAC-NRKSN---QQNLEV-IE 720
WD + K ++++ +K +W IL +++ETG PY+L+ D N K + NL++ +
Sbjct: 211 WDLISPKDQSVLFTIKARDIWIKILTTRVETGEPYILFIDQVDNNKPEIYKRLNLDIKMS 270
Query: 721 ELYNMVNKETG 731
L + TG
Sbjct: 271 NLCTEITLTTG 281
Score = 60 (26.2 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 593 IGVQGLADLFIQMRL-PFDCNESRLLNKQIFETIYYGALEASCEIAARDG 641
+GV G F+Q ++ PF+ + + NK+IF I A AS IA G
Sbjct: 350 VGVMGFHS-FLQSKMIPFESVAATIWNKKIFSHIRKHADAASYNIAMEKG 398
>TIGR_CMR|APH_0331 [details] [associations]
symbol:APH_0331 "ribonucleoside-diphosphate reductase,
alpha subunit" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0009265 "2'-deoxyribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
UniPathway:UPA00326 GO:GO:0005524 GO:GO:0006260 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0209 KO:K00525 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 HOGENOM:HOG000064500
ProtClustDB:PRK09102 RefSeq:YP_504939.1 ProteinModelPortal:Q2GL12
STRING:Q2GL12 GeneID:3931250 KEGG:aph:APH_0331 PATRIC:20949246
OMA:CEIIEYS BioCyc:APHA212042:GHPM-360-MONOMER Uniprot:Q2GL12
Length = 603
Score = 241 (89.9 bits), Expect = 5.2e-36, Sum P(2) = 5.2e-36
Identities = 52/147 (35%), Positives = 86/147 (58%)
Query: 402 PTASTAQILGNNE-SFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIV 460
PTAS + I GN EPY +N+++ + L+G F V N L L G DD + +
Sbjct: 427 PTASISIIAGNTSPGIEPYAANVFTHKTLTGSFIVRNKFLQELLKSKGKDDDQVWSSIST 486
Query: 461 NNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIYM-AEINYAKM 519
N GS+Q ++ + K ++KT +E+ Q+ V++ + DR +I Q+QS+NI++ A ++ +
Sbjct: 487 NEGSVQHLDFLTDHEKLVFKTAYELDQRWVIEHSGDRTPYICQAQSVNIFLPAGVHKRYL 546
Query: 520 SSMHFHGWKLGLKTGMYYLRTKPAANA 546
+HF WK GLK+ +YY+R+K A
Sbjct: 547 HKVHFLAWKKGLKS-LYYMRSKSVQRA 572
Score = 241 (89.9 bits), Expect = 5.2e-36, Sum P(2) = 5.2e-36
Identities = 52/147 (35%), Positives = 86/147 (58%)
Query: 806 PTASTAQILGNNE-SFEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLWDDNMKDQLIV 864
PTAS + I GN EPY +N+++ + L+G F V N L L G DD + +
Sbjct: 427 PTASISIIAGNTSPGIEPYAANVFTHKTLTGSFIVRNKFLQELLKSKGKDDDQVWSSIST 486
Query: 865 NNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIYM-AEINYAKM 923
N GS+Q ++ + K ++KT +E+ Q+ V++ + DR +I Q+QS+NI++ A ++ +
Sbjct: 487 NEGSVQHLDFLTDHEKLVFKTAYELDQRWVIEHSGDRTPYICQAQSVNIFLPAGVHKRYL 546
Query: 924 SSMHFHGWKLGLKTGMYYLRTKPAANA 950
+HF WK GLK+ +YY+R+K A
Sbjct: 547 HKVHFLAWKKGLKS-LYYMRSKSVQRA 572
Score = 234 (87.4 bits), Expect = 5.2e-36, Sum P(2) = 5.2e-36
Identities = 85/272 (31%), Positives = 131/272 (48%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R G+ A+YL WH +I +FL++++ TG + P+ R + ++
Sbjct: 162 RRGSSAVYLPVWHPEIEEFLDIRRPTGGD-------------PN----RKALNIHHGVL- 203
Query: 151 PNTCRGLSDSWGE--KFDDLYKKYEAEGK-FIRQVPARKLWFAILDSQIETGTPYMLYKD 207
LSD + E + D + + K I V AR LW IL +++ETG PY+++ D
Sbjct: 204 ------LSDEFMEAVEHDKTWDLLSPKDKCVISTVKARDLWIKILTTRVETGEPYIIFVD 257
Query: 208 ACNRKSNQ--QNLGT-IKCSNLCTEIVEYTSKDEV-----AVCNLASIALNMYINPADKT 259
A NR + + LG +K SNLCTEI T +D + AVC L+S+ L Y
Sbjct: 258 AVNRCKPEIYKKLGLDVKMSNLCTEITLTTGEDHLKKSRTAVCCLSSLNLEYYDMWCGNP 317
Query: 260 YNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRL-PF 318
F ++DV + + L + +E AR S MR R IGIGV G F+Q ++ PF
Sbjct: 318 -QF--IEDVMRFLDNVLTDFVQKAPTELERARYSAMRERSIGIGVMGFHS-FLQSKMVPF 373
Query: 319 DCNESRLLNKQIFETIYYGALEASCEIAARDG 350
+ + + NK+IF + A S ++A G
Sbjct: 374 ESFAATMWNKKIFSYLKSQADAVSRKLALEKG 405
Score = 132 (51.5 bits), Expect = 3.2e-26, Sum P(3) = 3.2e-26
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFR-ARDLFYGLWIPDEFMRRVESDAQWSLM 59
R G+ A+YL WH +I +FL++++ TG + R A ++ +G+ + DEFM VE D W L+
Sbjct: 162 RRGSSAVYLPVWHPEIEEFLDIRRPTGGDPNRKALNIHHGVLLSDEFMEAVEHDKTWDLL 221
Query: 60 CP 61
P
Sbjct: 222 SP 223
Score = 99 (39.9 bits), Expect = 7.1e-22, Sum P(2) = 7.1e-22
Identities = 26/94 (27%), Positives = 45/94 (47%)
Query: 621 IFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYD--MWGVTPTDLWDWAALK--- 675
++ +++ +E +I G + + G+L D M V WD + K
Sbjct: 168 VYLPVWHPEIEEFLDIRRPTGGDPNRKALNIHHGVLLSDEFMEAVEHDKTWDLLSPKDKC 227
Query: 676 VLALVYGLKLWFAILDSQIETGTPYMLYKDACNR 709
V++ V LW IL +++ETG PY+++ DA NR
Sbjct: 228 VISTVKARDLWIKILTTRVETGEPYIIFVDAVNR 261
Score = 53 (23.7 bits), Expect = 3.2e-26, Sum P(3) = 3.2e-26
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 593 IGVQGLADLFIQMRL-PFDCNESRLLNKQIFETIYYGALEASCEIAARDG 641
IGV G F+Q ++ PF+ + + NK+IF + A S ++A G
Sbjct: 357 IGVMGFHS-FLQSKMVPFESFAATMWNKKIFSYLKSQADAVSRKLALEKG 405
>TIGR_CMR|CPS_2328 [details] [associations]
symbol:CPS_2328 "ribonucleoside-diphosphate reductase,
alpha subunit" species:167879 "Colwellia psychrerythraea 34H"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209 KO:K00525
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506
OMA:YKYGVKT HOGENOM:HOG000278076 ProtClustDB:PRK09103
RefSeq:YP_269048.1 ProteinModelPortal:Q482G9 SMR:Q482G9
STRING:Q482G9 GeneID:3522540 KEGG:cps:CPS_2328 PATRIC:21467749
BioCyc:CPSY167879:GI48-2393-MONOMER Uniprot:Q482G9
Length = 756
Score = 378 (138.1 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 124/408 (30%), Positives = 195/408 (47%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA ++ WH ++ L LK N G EE R R L YG+ +R+ +L
Sbjct: 298 RGGAATLFYPLWHLEVESLLVLKNNRGVEENRVRHLDYGVQFNKLMYQRLIKGGSITLFS 357
Query: 151 PNTCRGLSDSW---GEKFDDLYKKYEAEGKFIRQ-VPARKLWFAILDSQIETGTPYMLYK 206
P+ GL D++ EKF+ LY +YE + ++ + A +L+ + TG Y+
Sbjct: 358 PSDVPGLYDAFFEDQEKFERLYVQYENDDSIRKKRIKAIELFTLFAQERASTGRIYLQNV 417
Query: 207 DACNRKSN-QQNLGTIKCSNLCTEIVEYTS--KD------EVAVCNLASIALNMYINPAD 257
D CN S + I+ SNLC EI T D E+A+C L++ L I+ D
Sbjct: 418 DHCNTHSPFDSSKAAIRQSNLCLEIALPTKPMNDINDENGEIALCTLSAFNLGA-IDSLD 476
Query: 258 KTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLP 317
+ L+ +A + + L+ ++D YP+ A++++M R +GIGV A + L
Sbjct: 477 E------LEGLADLAVRALDSLLDYQDYPIAAAQSASMARRTLGIGVINYAYYLAKNGLY 530
Query: 318 FDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDL 377
+ + L + FE I + L+A+ E+A G ++ + +S+GIL D + T D+
Sbjct: 531 YSNGSANNLTHRTFEAIQFYLLKATNELAKEQGACPKFDETLLSKGILPIDTYKKTIDDI 590
Query: 378 W------DWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSG 431
DW +L+E I KHGVRNS + A MP+ +++QI EP I + G
Sbjct: 591 TGEPLHLDWESLRESIKKHGVRNSTVSALMPSETSSQISNATNGIEPPRGLISIKASKDG 650
Query: 432 EF-QVV-NHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKD 477
QVV + L+ EL LW N+ D N G ++ + GI QK D
Sbjct: 651 VLKQVVPEYEKLKGNYEL-LW--NIPD----NQGYLE-LVGIMQKFVD 690
Score = 119 (46.9 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 42/112 (37%), Positives = 57/112 (50%)
Query: 772 DMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRR 831
D+ G P L DW +L+E I KHGVRNS + A MP+ +++QI EP I +
Sbjct: 589 DITG-EPLHL-DWESLRESIKKHGVRNSTVSALMPSETSSQISNATNGIEPPRGLISIKA 646
Query: 832 VLSGEF-QVV-NHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKD 881
G QVV + L+ EL LW N+ D N G ++ + GI QK D
Sbjct: 647 SKDGVLKQVVPEYEKLKGNYEL-LW--NIPD----NQGYLE-LVGIMQKFVD 690
Score = 116 (45.9 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA ++ WH ++ L LK N G EE R R L YG+ +R+ +L
Sbjct: 298 RGGAATLFYPLWHLEVESLLVLKNNRGVEENRVRHLDYGVQFNKLMYQRLIKGGSITLFS 357
Query: 61 PNACRGLSDSW---GEKFDDLYKKYE 83
P+ GL D++ EKF+ LY +YE
Sbjct: 358 PSDVPGLYDAFFEDQEKFERLYVQYE 383
Score = 75 (31.5 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 32/141 (22%), Positives = 59/141 (41%)
Query: 551 IDKTKMANAMASKDARSQEEIQADQEQAMAAMICRRDNKEDC-IGVQGLADLFIQMRLPF 609
ID +A R+ + + Q+ +AA + IGV A + L +
Sbjct: 472 IDSLDELEGLADLAVRALDSLLDYQDYPIAAAQSASMARRTLGIGVINYAYYLAKNGLYY 531
Query: 610 DCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWGVTPTDLW 669
+ L + FE I + L+A+ E+A G ++ + +S+GIL D + T D+
Sbjct: 532 SNGSANNLTHRTFEAIQFYLLKATNELAKEQGACPKFDETLLSKGILPIDTYKKTIDDIT 591
Query: 670 ------DWAALKVLALVYGLK 684
DW +L+ +G++
Sbjct: 592 GEPLHLDWESLRESIKKHGVR 612
Score = 70 (29.7 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 462 NGSIQDIEGIPQKLKDLYKTVWEIPQKT-VLDMAADRGAFIDQSQSLNIYM-------AE 513
+G ++ + +KLK Y+ +W IP L++ F+DQ+ S N +
Sbjct: 649 DGVLKQVVPEYEKLKGNYELLWNIPDNQGYLELVGIMQKFVDQAISANTNYDPNKFEGGK 708
Query: 514 INYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 545
+ ++ +KLG+KT +YY T+ A+
Sbjct: 709 VPVKQILKDILTAYKLGVKT-LYYHNTRDGAS 739
Score = 70 (29.7 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 866 NGSIQDIEGIPQKLKDLYKTVWEIPQKT-VLDMAADRGAFIDQSQSLNIYM-------AE 917
+G ++ + +KLK Y+ +W IP L++ F+DQ+ S N +
Sbjct: 649 DGVLKQVVPEYEKLKGNYELLWNIPDNQGYLELVGIMQKFVDQAISANTNYDPNKFEGGK 708
Query: 918 INYAKMSSMHFHGWKLGLKTGMYYLRTKPAAN 949
+ ++ +KLG+KT +YY T+ A+
Sbjct: 709 VPVKQILKDILTAYKLGVKT-LYYHNTRDGAS 739
Score = 42 (19.8 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 18/84 (21%), Positives = 32/84 (38%)
Query: 680 VYGLKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIEELYNMVNKETGTRTPM--I 737
+ ++L+ + TG Y+ D CN S + + N+ + PM I
Sbjct: 393 IKAIELFTLFAQERASTGRIYLQNVDHCNTHSPFDSSKAAIRQSNLCLEIALPTKPMNDI 452
Query: 738 SDKHYEIIMKNADRLNSAIIYDRD 761
+D++ EI + N I D
Sbjct: 453 NDENGEIALCTLSAFNLGAIDSLD 476
>UNIPROTKB|P00452 [details] [associations]
symbol:nrdA species:83333 "Escherichia coli K-12"
[GO:0015949 "nucleobase-containing small molecule interconversion"
evidence=IDA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA;IDA] [GO:0009263 "deoxyribonucleotide
biosynthetic process" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA;IDA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013346 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006260 GO:GO:0015949 PDB:1QFN PDBsum:1QFN GO:GO:0009263
EMBL:K02672 InterPro:IPR005144 PROSITE:PS51161 eggNOG:COG0209
KO:K00525 GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 OMA:YKYGVKT EMBL:X06999 PIR:H64993
RefSeq:NP_416737.1 RefSeq:YP_490473.1 PDB:1R1R PDB:1RLR PDB:2R1R
PDB:2X0X PDB:2XAK PDB:2XAP PDB:2XAV PDB:2XAW PDB:2XAX PDB:2XAY
PDB:2XAZ PDB:2XO4 PDB:2XO5 PDB:3R1R PDB:3UUS PDB:4ERM PDB:4ERP
PDB:4R1R PDB:5R1R PDB:6R1R PDB:7R1R PDBsum:1R1R PDBsum:1RLR
PDBsum:2R1R PDBsum:2X0X PDBsum:2XAK PDBsum:2XAP PDBsum:2XAV
PDBsum:2XAW PDBsum:2XAX PDBsum:2XAY PDBsum:2XAZ PDBsum:2XO4
PDBsum:2XO5 PDBsum:3R1R PDBsum:3UUS PDBsum:4ERM PDBsum:4ERP
PDBsum:4R1R PDBsum:5R1R PDBsum:6R1R PDBsum:7R1R
ProteinModelPortal:P00452 SMR:P00452 DIP:DIP-584N IntAct:P00452
MINT:MINT-1233906 PaxDb:P00452 PRIDE:P00452
EnsemblBacteria:EBESCT00000000432 EnsemblBacteria:EBESCT00000016572
GeneID:12933136 GeneID:946612 KEGG:ecj:Y75_p2196 KEGG:eco:b2234
PATRIC:32119827 EchoBASE:EB0654 EcoGene:EG10660
HOGENOM:HOG000278076 ProtClustDB:PRK09103
BioCyc:EcoCyc:NRDA-MONOMER BioCyc:ECOL316407:JW2228-MONOMER
BioCyc:MetaCyc:NRDA-MONOMER SABIO-RK:P00452
EvolutionaryTrace:P00452 Genevestigator:P00452 Uniprot:P00452
Length = 761
Score = 369 (135.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 123/408 (30%), Positives = 191/408 (46%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA ++ WH ++ L LK N G E R R + YG+ I R+ +L
Sbjct: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357
Query: 151 PNTCRGLSDSW---GEKFDDLYKKYEAEGKFIRQ-VPARKLWFAILDSQIETGTPYMLYK 206
P+ GL D++ E+F+ LY KYE + +Q V A +L+ ++ + TG Y+
Sbjct: 358 PSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNV 417
Query: 207 DACNRKSN-QQNLGTIKCSNLCTEIVEYTS--KD------EVAVCNLASIALNMYINPAD 257
D CN S + ++ SNLC EI T D E+A+C L++ L IN
Sbjct: 418 DHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGA-IN--- 473
Query: 258 KTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLP 317
N +L+++A + + L+ ++D YP+ A+ M R +GIGV A +
Sbjct: 474 ---NLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKR 530
Query: 318 FDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWG-----V 372
+ + L + FE I Y L+AS E+A G + + ++GIL D + +
Sbjct: 531 YSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTI 590
Query: 373 TPTDL-WDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSG 431
L +DW AL+E I HG+RNS L A MP+ +++QI EP + + G
Sbjct: 591 ANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDG 650
Query: 432 EF-QVV-NHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKD 477
QVV ++ L D EL LW+ + N+G +Q + GI QK D
Sbjct: 651 ILRQVVPDYEHLHDAYEL-LWE------MPGNDGYLQ-LVGIMQKFID 690
Score = 121 (47.7 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 41/116 (35%), Positives = 59/116 (50%)
Query: 769 FKYDMWGVTPTDL-WDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNI 827
+K D+ + L +DW AL+E I HG+RNS L A MP+ +++QI EP +
Sbjct: 583 YKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYV 642
Query: 828 YSRRVLSGEF-QVV-NHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKD 881
+ G QVV ++ L D EL LW+ M N+G +Q + GI QK D
Sbjct: 643 SIKASKDGILRQVVPDYEHLHDAYEL-LWE--MPG----NDGYLQ-LVGIMQKFID 690
Score = 111 (44.1 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 29/88 (32%), Positives = 43/88 (48%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA ++ WH ++ L LK N G E R R + YG+ I R+ +L
Sbjct: 298 RGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFS 357
Query: 61 PNACRGLSDSW---GEKFDDLYKKYEAE 85
P+ GL D++ E+F+ LY KYE +
Sbjct: 358 PSDVPGLYDAFFADQEEFERLYTKYEKD 385
Score = 72 (30.4 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 26/98 (26%), Positives = 42/98 (42%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
IGV A + + + L + FE I Y L+AS E+A G + + +
Sbjct: 515 IGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYA 574
Query: 653 QGILQYDMWG-----VTPTDL-WDWAALKVLALVYGLK 684
+GIL D + + L +DW AL+ +GL+
Sbjct: 575 KGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLR 612
Score = 70 (29.7 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 25/95 (26%), Positives = 42/95 (44%)
Query: 462 NGSIQDIEGIPQKLKDLYKTVWEIPQKT-VLDMAADRGAFIDQSQSLNI-Y------MAE 513
+G ++ + + L D Y+ +WE+P L + FIDQS S N Y +
Sbjct: 649 DGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGK 708
Query: 514 INYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQ 548
+ ++ +K G+KT +YY T+ A Q
Sbjct: 709 VPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQ 742
Score = 70 (29.7 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 25/95 (26%), Positives = 42/95 (44%)
Query: 866 NGSIQDIEGIPQKLKDLYKTVWEIPQKT-VLDMAADRGAFIDQSQSLNI-Y------MAE 917
+G ++ + + L D Y+ +WE+P L + FIDQS S N Y +
Sbjct: 649 DGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGK 708
Query: 918 INYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQ 952
+ ++ +K G+KT +YY T+ A Q
Sbjct: 709 VPMQQLLKDLLTAYKFGVKT-LYYQNTRDGAEDAQ 742
Score = 39 (18.8 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 680 VYGLKLWFAILDSQIETGTPYMLYKDACNRKS 711
V ++L+ ++ + TG Y+ D CN S
Sbjct: 393 VKAVELFSLMMQERASTGRIYIQNVDHCNTHS 424
>TIGR_CMR|SO_2415 [details] [associations]
symbol:SO_2415 "ribonucleoside-diphosphate reductase, alpha
subunit" species:211586 "Shewanella oneidensis MR-1" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR005144 PROSITE:PS51161 KO:K00525 GO:GO:0005971
GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02506 OMA:YKYGVKT
HOGENOM:HOG000278076 ProtClustDB:PRK09103 RefSeq:NP_718005.1
HSSP:P00452 ProteinModelPortal:Q8EEG7 SMR:Q8EEG7 GeneID:1170130
KEGG:son:SO_2415 PATRIC:23524447 Uniprot:Q8EEG7
Length = 762
Score = 362 (132.5 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 119/409 (29%), Positives = 193/409 (47%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA ++ WH ++ L LK N G E+ R R L YG+ + +R+ SL
Sbjct: 298 RGGAATLFYPIWHLEVESLLVLKNNRGVEDNRIRHLDYGVQLNKLMYQRLIKGESISLFS 357
Query: 151 PNTCRGLSDSWGE---KFDDLYKKYEAEGKFIRQ-VPARKLWFAILDSQIETGTPYMLYK 206
P+ GL D++ E +F+ LY +YE + ++ + A L+ ++ + TG Y+
Sbjct: 358 PSDVPGLYDAFFEDQAEFERLYLQYEQDSSIRKKTLKAVDLFSLMMQERASTGRIYIQNV 417
Query: 207 DACNRKSN-QQNLGTIKCSNLCTEIVEYTS--------KDEVAVCNLASIALNMYINPAD 257
D CN S + I+ SNLC EI T E+A+C L+++ L + A+
Sbjct: 418 DHCNTHSPFDSKVAPIRQSNLCLEIALPTKPLNNIDDPNGEIALCTLSALNLGTITDLAE 477
Query: 258 KTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLP 317
L+ +A + + L+ ++D YP++ A+ S+M R +GIGV A+ + +
Sbjct: 478 -------LEPLADLAVRALDNLLDYQDYPIKAAQISSMNRRTLGIGVINFANYLAKNGMK 530
Query: 318 FDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWG------ 371
+ + L + FE I + L+AS +A G + + +QGIL D +
Sbjct: 531 YSDGSANNLTHKTFEAIQFYLLKASMNLAKEKGACPLFNETTYAQGILPIDTYKRDLDKI 590
Query: 372 -VTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLS 430
P L DW AL+ I ++G+RNS L A MP+ +++QI EP I +
Sbjct: 591 CSEPLHL-DWEALRSDIKEYGLRNSTLSALMPSETSSQISNATNGIEPPRGLISVKASKD 649
Query: 431 GEF-QVV-NHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKD 477
G+ QVV + L++ EL LW Q+ N G +Q + GI QK D
Sbjct: 650 GQLKQVVPDFDTLKNNYEL-LW------QMPSNEGYLQ-LVGIMQKFVD 690
Score = 113 (44.8 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 29/91 (31%), Positives = 46/91 (50%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA ++ WH ++ L LK N G E+ R R L YG+ + +R+ SL
Sbjct: 298 RGGAATLFYPIWHLEVESLLVLKNNRGVEDNRIRHLDYGVQLNKLMYQRLIKGESISLFS 357
Query: 61 PNACRGLSDSWGE---KFDDLYKKYEAEGLV 88
P+ GL D++ E +F+ LY +YE + +
Sbjct: 358 PSDVPGLYDAFFEDQAEFERLYLQYEQDSSI 388
Score = 109 (43.4 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 36/101 (35%), Positives = 52/101 (51%)
Query: 783 DWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEF-QVV- 840
DW AL+ I ++G+RNS L A MP+ +++QI EP I + G+ QVV
Sbjct: 598 DWEALRSDIKEYGLRNSTLSALMPSETSSQISNATNGIEPPRGLISVKASKDGQLKQVVP 657
Query: 841 NHHLLRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKD 881
+ L++ EL LW Q+ N G +Q + GI QK D
Sbjct: 658 DFDTLKNNYEL-LW------QMPSNEGYLQ-LVGIMQKFVD 690
Score = 81 (33.6 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 35/143 (24%), Positives = 58/143 (40%)
Query: 550 TIDKTKMANAMASKDARSQEEIQADQEQAM-AAMICRRDNKEDCIGVQGLADLFIQMRLP 608
TI +A R+ + + Q+ + AA I + + IGV A+ + +
Sbjct: 471 TITDLAELEPLADLAVRALDNLLDYQDYPIKAAQISSMNRRTLGIGVINFANYLAKNGMK 530
Query: 609 FDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWG------ 662
+ + L + FE I + L+AS +A G + + +QGIL D +
Sbjct: 531 YSDGSANNLTHKTFEAIQFYLLKASMNLAKEKGACPLFNETTYAQGILPIDTYKRDLDKI 590
Query: 663 -VTPTDLWDWAALKVLALVYGLK 684
P L DW AL+ YGL+
Sbjct: 591 CSEPLHL-DWEALRSDIKEYGLR 612
Score = 68 (29.0 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 25/92 (27%), Positives = 45/92 (48%)
Query: 462 NGSIQDIEGIPQKLKDLYKTVWEIPQKT-VLDMAADRGAFIDQSQSLNI-Y-MAEINYAK 518
+G ++ + LK+ Y+ +W++P L + F+DQ+ S N Y A K
Sbjct: 649 DGQLKQVVPDFDTLKNNYELLWQMPSNEGYLQLVGIMQKFVDQAISANTNYDPARFEGRK 708
Query: 519 --MSSMH---FHGWKLGLKTGMYYLRTKPAAN 545
M ++ + +KLG+KT +YY T+ A+
Sbjct: 709 VPMQTLLKDLLNAYKLGVKT-LYYHNTRDGAS 739
Score = 68 (29.0 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 25/92 (27%), Positives = 45/92 (48%)
Query: 866 NGSIQDIEGIPQKLKDLYKTVWEIPQKT-VLDMAADRGAFIDQSQSLNI-Y-MAEINYAK 922
+G ++ + LK+ Y+ +W++P L + F+DQ+ S N Y A K
Sbjct: 649 DGQLKQVVPDFDTLKNNYELLWQMPSNEGYLQLVGIMQKFVDQAISANTNYDPARFEGRK 708
Query: 923 --MSSMH---FHGWKLGLKTGMYYLRTKPAAN 949
M ++ + +KLG+KT +YY T+ A+
Sbjct: 709 VPMQTLLKDLLNAYKLGVKT-LYYHNTRDGAS 739
Score = 37 (18.1 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 18/77 (23%), Positives = 29/77 (37%)
Query: 685 LWFAILDSQIETGTPYMLYKDACNRKSNQQNLEVIEELYNMVNKETGTRTPM--ISDKHY 742
L+ ++ + TG Y+ D CN S + N+ + P+ I D +
Sbjct: 398 LFSLMMQERASTGRIYIQNVDHCNTHSPFDSKVAPIRQSNLCLEIALPTKPLNNIDDPNG 457
Query: 743 EIIMKNADRLNSAIIYD 759
EI + LN I D
Sbjct: 458 EIALCTLSALNLGTITD 474
>UNIPROTKB|Q9KSK0 [details] [associations]
symbol:VC1256 "Ribonucleoside-diphosphate reductase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GenomeReviews:AE003852_GR InterPro:IPR005144
PROSITE:PS51161 GO:GO:0009265 KO:K00525 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 TIGRFAMs:TIGR02506 OMA:YKYGVKT ProtClustDB:PRK09103
HSSP:P00452 EMBL:AE004204 PIR:E82223 RefSeq:NP_230901.1
ProteinModelPortal:Q9KSK0 SMR:Q9KSK0 DNASU:2614693 GeneID:2614693
KEGG:vch:VC1256 PATRIC:20081592 Uniprot:Q9KSK0
Length = 761
Score = 359 (131.4 bits), Expect = 2.8e-29, P = 2.8e-29
Identities = 117/408 (28%), Positives = 192/408 (47%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA ++ WHG+ L LK N G EE R R + YG+ + +R+ +L
Sbjct: 298 RGGAATVFYPLWHGEAESLLVLKNNRGVEENRVRHMDYGVQLNKLMYKRLVEGGNITLFS 357
Query: 151 PNTCRGLSDSW---GEKFDDLYKKYEAEGKFIRQ-VPARKLWFAILDSQIETGTPYMLYK 206
P+ GL D++ ++F+ LY KYE + ++ V A +++ ++ + TG Y+
Sbjct: 358 PSDVPGLYDAFFQDQDEFERLYVKYENDPSIKKKTVKALEIFTLLMQERASTGRIYIQNV 417
Query: 207 DACNRKSN-QQNLGTIKCSNLCTEIVEYTS-----KDE---VAVCNLASIALNMYINPAD 257
D CN S + ++ SNLC EI TS +DE +A+C L++ L I D
Sbjct: 418 DHCNTHSPFDAAVAPVRQSNLCLEIALPTSPLANVEDESGEIALCTLSAFNLGA-IESLD 476
Query: 258 KTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLP 317
+F +L D +V + L+ ++D YP+ AR S+M R +G+GV A + +
Sbjct: 477 ---DFEELSD---LVVRALDALLDYQDYPLPAARRSSMNRRTLGVGVINYAYYLAKNGVK 530
Query: 318 FDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWG-----V 372
+ + L + FE + Y L AS ++A G + + ++G++ D + V
Sbjct: 531 YSDGSANGLTHRTFEAMQYHLLRASMKLAKEQGRCPLFHETNYAKGLMPIDTYKKDIDLV 590
Query: 373 TPTDL-WDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSG 431
L +DW L+ +I +HG+RNS L A MP+ +++QI EP + + G
Sbjct: 591 CAEPLHYDWDKLRHEIMEHGLRNSTLTALMPSETSSQISNATNGIEPPRGYVSVKASKDG 650
Query: 432 EF-QVVNHHL-LRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKD 477
QVV L++ EL LW+ I +N + GI QK D
Sbjct: 651 ILKQVVPEFTRLKENYEL-LWN-------IGSNDGYLHLVGIMQKFVD 690
Score = 122 (48.0 bits), Expect = 4.9e-10, Sum P(3) = 4.9e-10
Identities = 29/86 (33%), Positives = 44/86 (51%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA ++ WHG+ L LK N G EE R R + YG+ + +R+ +L
Sbjct: 298 RGGAATVFYPLWHGEAESLLVLKNNRGVEENRVRHMDYGVQLNKLMYKRLVEGGNITLFS 357
Query: 61 PNACRGLSDSW---GEKFDDLYKKYE 83
P+ GL D++ ++F+ LY KYE
Sbjct: 358 PSDVPGLYDAFFQDQDEFERLYVKYE 383
Score = 100 (40.3 bits), Expect = 4.9e-10, Sum P(3) = 4.9e-10
Identities = 33/102 (32%), Positives = 49/102 (48%)
Query: 782 WDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEF-QVV 840
+DW L+ +I +HG+RNS L A MP+ +++QI EP + + G QVV
Sbjct: 597 YDWDKLRHEIMEHGLRNSTLTALMPSETSSQISNATNGIEPPRGYVSVKASKDGILKQVV 656
Query: 841 NHHL-LRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKD 881
L++ EL LW+ I +N + GI QK D
Sbjct: 657 PEFTRLKENYEL-LWN-------IGSNDGYLHLVGIMQKFVD 690
Score = 58 (25.5 bits), Expect = 4.9e-10, Sum P(3) = 4.9e-10
Identities = 21/98 (21%), Positives = 42/98 (42%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+GV A + + + + L + FE + Y L AS ++A G + + +
Sbjct: 515 VGVINYAYYLAKNGVKYSDGSANGLTHRTFEAMQYHLLRASMKLAKEQGRCPLFHETNYA 574
Query: 653 QGILQYDMWG-----VTPTDL-WDWAALKVLALVYGLK 684
+G++ D + V L +DW L+ + +GL+
Sbjct: 575 KGLMPIDTYKKDIDLVCAEPLHYDWDKLRHEIMEHGLR 612
Score = 41 (19.5 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 680 VYGLKLWFAILDSQIETGTPYMLYKDACNRKS 711
V L+++ ++ + TG Y+ D CN S
Sbjct: 393 VKALEIFTLLMQERASTGRIYIQNVDHCNTHS 424
>TIGR_CMR|VC_1256 [details] [associations]
symbol:VC_1256 "ribonucleoside-diphosphate reductase, alpha
subunit" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013346
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005524
GO:GO:0006260 GenomeReviews:AE003852_GR InterPro:IPR005144
PROSITE:PS51161 GO:GO:0009265 KO:K00525 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 TIGRFAMs:TIGR02506 OMA:YKYGVKT ProtClustDB:PRK09103
HSSP:P00452 EMBL:AE004204 PIR:E82223 RefSeq:NP_230901.1
ProteinModelPortal:Q9KSK0 SMR:Q9KSK0 DNASU:2614693 GeneID:2614693
KEGG:vch:VC1256 PATRIC:20081592 Uniprot:Q9KSK0
Length = 761
Score = 359 (131.4 bits), Expect = 2.8e-29, P = 2.8e-29
Identities = 117/408 (28%), Positives = 192/408 (47%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA ++ WHG+ L LK N G EE R R + YG+ + +R+ +L
Sbjct: 298 RGGAATVFYPLWHGEAESLLVLKNNRGVEENRVRHMDYGVQLNKLMYKRLVEGGNITLFS 357
Query: 151 PNTCRGLSDSW---GEKFDDLYKKYEAEGKFIRQ-VPARKLWFAILDSQIETGTPYMLYK 206
P+ GL D++ ++F+ LY KYE + ++ V A +++ ++ + TG Y+
Sbjct: 358 PSDVPGLYDAFFQDQDEFERLYVKYENDPSIKKKTVKALEIFTLLMQERASTGRIYIQNV 417
Query: 207 DACNRKSN-QQNLGTIKCSNLCTEIVEYTS-----KDE---VAVCNLASIALNMYINPAD 257
D CN S + ++ SNLC EI TS +DE +A+C L++ L I D
Sbjct: 418 DHCNTHSPFDAAVAPVRQSNLCLEIALPTSPLANVEDESGEIALCTLSAFNLGA-IESLD 476
Query: 258 KTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLP 317
+F +L D +V + L+ ++D YP+ AR S+M R +G+GV A + +
Sbjct: 477 ---DFEELSD---LVVRALDALLDYQDYPLPAARRSSMNRRTLGVGVINYAYYLAKNGVK 530
Query: 318 FDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVSQGILQYDMWG-----V 372
+ + L + FE + Y L AS ++A G + + ++G++ D + V
Sbjct: 531 YSDGSANGLTHRTFEAMQYHLLRASMKLAKEQGRCPLFHETNYAKGLMPIDTYKKDIDLV 590
Query: 373 TPTDL-WDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSG 431
L +DW L+ +I +HG+RNS L A MP+ +++QI EP + + G
Sbjct: 591 CAEPLHYDWDKLRHEIMEHGLRNSTLTALMPSETSSQISNATNGIEPPRGYVSVKASKDG 650
Query: 432 EF-QVVNHHL-LRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKD 477
QVV L++ EL LW+ I +N + GI QK D
Sbjct: 651 ILKQVVPEFTRLKENYEL-LWN-------IGSNDGYLHLVGIMQKFVD 690
Score = 122 (48.0 bits), Expect = 4.9e-10, Sum P(3) = 4.9e-10
Identities = 29/86 (33%), Positives = 44/86 (51%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA ++ WHG+ L LK N G EE R R + YG+ + +R+ +L
Sbjct: 298 RGGAATVFYPLWHGEAESLLVLKNNRGVEENRVRHMDYGVQLNKLMYKRLVEGGNITLFS 357
Query: 61 PNACRGLSDSW---GEKFDDLYKKYE 83
P+ GL D++ ++F+ LY KYE
Sbjct: 358 PSDVPGLYDAFFQDQDEFERLYVKYE 383
Score = 100 (40.3 bits), Expect = 4.9e-10, Sum P(3) = 4.9e-10
Identities = 33/102 (32%), Positives = 49/102 (48%)
Query: 782 WDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEF-QVV 840
+DW L+ +I +HG+RNS L A MP+ +++QI EP + + G QVV
Sbjct: 597 YDWDKLRHEIMEHGLRNSTLTALMPSETSSQISNATNGIEPPRGYVSVKASKDGILKQVV 656
Query: 841 NHHL-LRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKD 881
L++ EL LW+ I +N + GI QK D
Sbjct: 657 PEFTRLKENYEL-LWN-------IGSNDGYLHLVGIMQKFVD 690
Score = 58 (25.5 bits), Expect = 4.9e-10, Sum P(3) = 4.9e-10
Identities = 21/98 (21%), Positives = 42/98 (42%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGSPVS 652
+GV A + + + + L + FE + Y L AS ++A G + + +
Sbjct: 515 VGVINYAYYLAKNGVKYSDGSANGLTHRTFEAMQYHLLRASMKLAKEQGRCPLFHETNYA 574
Query: 653 QGILQYDMWG-----VTPTDL-WDWAALKVLALVYGLK 684
+G++ D + V L +DW L+ + +GL+
Sbjct: 575 KGLMPIDTYKKDIDLVCAEPLHYDWDKLRHEIMEHGLR 612
Score = 41 (19.5 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 680 VYGLKLWFAILDSQIETGTPYMLYKDACNRKS 711
V L+++ ++ + TG Y+ D CN S
Sbjct: 393 VKALEIFTLLMQERASTGRIYIQNVDHCNTHS 424
>TIGR_CMR|BA_1371 [details] [associations]
symbol:BA_1371 "ribonucleoside-diphosphate reductase, alpha
subunit, group I intron-containing" species:198094 "Bacillus
anthracis str. Ames" [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide biosynthetic
process" evidence=ISS] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 InterPro:IPR013554
Pfam:PF00317 Pfam:PF02867 Pfam:PF08343 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 GO:GO:0005524 EMBL:AE016879
GenomeReviews:AE016879_GR GO:GO:0006260 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 TIGRFAMs:TIGR02506 HOGENOM:HOG000246165
InterPro:IPR026459 TIGRFAMs:TIGR04170
EnsemblBacteria:EBBACT00000012288 PATRIC:18780342
ProtClustDB:PRK07632 Uniprot:Q81TB6
Length = 694
Score = 259 (96.2 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 76/311 (24%), Positives = 145/311 (46%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA A+YL +H DI +FL+ KK E+ R + L G+ +P +F E + + +
Sbjct: 235 RKGAGAVYLNIFHWDIIEFLDSKKINADEKSRIQSLSIGIIVPSKFFELAEKNEPFHVFA 294
Query: 151 PNTC-----RGLSD-SWGEKFDDLYKKYEAEGKFIRQVPARKLWFAILDSQIETGTPYML 204
P T + L D E +D+L + + K + + AR + I Q+E+G PY++
Sbjct: 295 PYTVYKEYGKHLDDIDIDEMYDELMSNPKVKKKPL-DISARDMLIKIAMIQLESGYPYLM 353
Query: 205 YKDACNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIA---LNMYINPADKTYN 261
+K N + +++GT+K SNLCTEI + E+ I +N + + N
Sbjct: 354 FKSNANNQHPLKDIGTVKMSNLCTEIFQLQETSEINDYGTDDIIRRDINCNLGSLN-IVN 412
Query: 262 FTKLKDVAKIV---TKNLNKIIDVNFYP-VEEARNSNMRHRPIGIGVQGLADLFIQMRLP 317
+ K++ + V + L + D+ P + +N +G+G L + ++
Sbjct: 413 VMENKEIREAVHAGMEALTAVSDMTIIPNAPTVKKANDELHSVGLGAMNLHGYLAKNKIA 472
Query: 318 FDCNESRLLNKQIFETIYYGALEASCEIAARDGP-YQTYEGSPVSQGILQYDMWGVTPTD 376
++ E++ + F + Y ++E S EIA G ++ ++ S + G ++ + T
Sbjct: 473 YESEEAKEFARTFFMMLNYYSIEKSMEIAKEKGETFKDFDKSDYANGTY-FEKYETT--- 528
Query: 377 LWDWAALKEKI 387
D++ + EK+
Sbjct: 529 --DYSPVTEKV 537
Score = 108 (43.1 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 352 YQTYEGSPVSQGILQYDMWGV-TPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQIL 410
Y+T + SPV++ + Q G+ PT DW +LKE++ K+G+ NS +A PT S + +
Sbjct: 525 YETTDYSPVTEKVQQL-FEGIHIPTKE-DWTSLKEQVQKNGLYNSYRLAIAPTQSISYVQ 582
Query: 411 GNNESFEPYTSNIYSR 426
S P S I SR
Sbjct: 583 NATSSVMPIVSQIESR 598
Score = 108 (43.1 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA A+YL +H DI +FL+ KK E+ R + L G+ +P +F E + + +
Sbjct: 235 RKGAGAVYLNIFHWDIIEFLDSKKINADEKSRIQSLSIGIIVPSKFFELAEKNEPFHVFA 294
Query: 61 PNACRGLSDSWGEKFDDL 78
P + +G+ DD+
Sbjct: 295 PYT---VYKEYGKHLDDI 309
Score = 90 (36.7 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 783 DWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSR 830
DW +LKE++ K+G+ NS +A PT S + + S P S I SR
Sbjct: 551 DWTSLKEQVQKNGLYNSYRLAIAPTQSISYVQNATSSVMPIVSQIESR 598
Score = 83 (34.3 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 19/64 (29%), Positives = 40/64 (62%)
Query: 883 YKTVWEIPQKTVLDMAADRGAFIDQSQSLNIYM-AEINYAKMSSMHFHGWKLGLKTGMYY 941
YK+ +++ Q ++D+ A+ IDQ S +Y+ ++I+ +++ + + K GLK+ +YY
Sbjct: 620 YKSSYDMNQFKLIDLIAEIQEHIDQGISTILYVNSDISTRELARYYIYAHKKGLKS-LYY 678
Query: 942 LRTK 945
RT+
Sbjct: 679 TRTR 682
Score = 83 (34.3 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 19/64 (29%), Positives = 40/64 (62%)
Query: 479 YKTVWEIPQKTVLDMAADRGAFIDQSQSLNIYM-AEINYAKMSSMHFHGWKLGLKTGMYY 537
YK+ +++ Q ++D+ A+ IDQ S +Y+ ++I+ +++ + + K GLK+ +YY
Sbjct: 620 YKSSYDMNQFKLIDLIAEIQEHIDQGISTILYVNSDISTRELARYYIYAHKKGLKS-LYY 678
Query: 538 LRTK 541
RT+
Sbjct: 679 TRTR 682
Score = 56 (24.8 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGP-YQTYEGSPV 651
+G L + ++ ++ E++ + F + Y ++E S EIA G ++ ++ S
Sbjct: 457 LGAMNLHGYLAKNKIAYESEEAKEFARTFFMMLNYYSIEKSMEIAKEKGETFKDFDKSDY 516
Query: 652 SQG 654
+ G
Sbjct: 517 ANG 519
Score = 52 (23.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 700 YMLYKDACNRKSNQQNLEVIEELYNMVNKETGT-RTPMISDKHY-EIIMKNADR 751
YM D ++ NLE +EE+YN+ E ++ M + K Y + +K D+
Sbjct: 50 YMKEHDYYYNVLDEYNLEEVEEVYNIAYGENFEFQSYMAASKFYKDYALKTNDQ 103
Score = 49 (22.3 bits), Expect = 6.6e-11, Sum P(4) = 6.6e-11
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 693 QIETGTPYMLYKDACNRKSNQQNLEVI 719
Q+E+G PY+++K N NQ L+ I
Sbjct: 344 QLESGYPYLMFKSNAN---NQHPLKDI 367
>UNIPROTKB|P0A5W8 [details] [associations]
symbol:nrdE "Ribonucleoside-diphosphate reductase subunit
alpha" species:1773 "Mycobacterium tuberculosis" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IDA] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] [GO:0051063 "CDP reductase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 InterPro:IPR013554
Pfam:PF00317 Pfam:PF02867 Pfam:PF08343 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 GO:GO:0005886 GO:GO:0005524
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006260 EMBL:BX842581 GO:GO:0009263
eggNOG:COG0209 KO:K00525 GO:GO:0005971 SUPFAM:SSF48168
TIGRFAMs:TIGR02506 EMBL:L34407 PIR:F70861 RefSeq:NP_217567.1
RefSeq:NP_337654.1 ProteinModelPortal:P0A5W8 SMR:P0A5W8
EnsemblBacteria:EBMYCT00000003419 EnsemblBacteria:EBMYCT00000070027
GeneID:888869 GeneID:923996 KEGG:mtc:MT3137 KEGG:mtu:Rv3051c
PATRIC:18128658 TubercuList:Rv3051c HOGENOM:HOG000246165
OMA:VSRIEIR ProtClustDB:PRK08188 GO:GO:0051063 InterPro:IPR026459
TIGRFAMs:TIGR04170 Uniprot:P0A5W8
Length = 725
Score = 262 (97.3 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 116/479 (24%), Positives = 210/479 (43%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA A+YL H DI+ FL+ K+ E+ R + L G+ IPD + + L
Sbjct: 262 RQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFS 321
Query: 151 PNTCRGLSDSWGEKFDDLY---KKYE-AEGKFIRQ--VPARKLWFAILDSQIETGTPYML 204
P + +G F D+ K YE + IR+ + AR+ + + + Q E+G PY++
Sbjct: 322 PYDVERV---YGVPFADISVTEKYYEMVDDARIRKTKIKAREFFQTLAELQFESGYPYIM 378
Query: 205 YKDACNRKSNQQNLGTIKCSNLCTEIVEYTS----KDEVAVCNLAS-IALNM-YINPADK 258
++D NR +N + G I SNLC+EI++ ++ ++++ + I+ N+ +N A K
Sbjct: 379 FEDTVNR-ANPID-GKITHSNLCSEILQVSTPSLFNEDLSYAKVGKDISCNLGSLNIA-K 435
Query: 259 TYNFTKLKDVAKIVTKNLNKIID-VNFYPVEEARNSNMRHRPIGIGVQGLADLFIQMRLP 317
T + ++ + L + D + V N IG+G L + R+
Sbjct: 436 TMDSPDFAQTIEVAIRALTAVSDQTHIKSVPSIEQGNNDSHAIGLGQMNLHGYLARERIF 495
Query: 318 FDCNESRLLNKQIFETIYYGALEASCEIAARDGP-YQTYEGSPVSQGILQYDMWGVTPTD 376
+ +E F T+ Y AL AS IA G ++ +E S + G +D + TD
Sbjct: 496 YGSDEGIDFTNIYFYTVLYHALRASNRIAIERGTHFKGFERSKYASGEF-FDKY----TD 550
Query: 377 -LWD--WAALKEKIAKHGVRNSLLIAPMPTASTAQILGNN-ESFEPYTSNIYSRRVLSGE 432
+W+ +++ A G+R +PT + L + ++ Y N+ + +G
Sbjct: 551 QIWEPKTQKVRQLFADAGIR-------IPTQDDWRRLKESVQAHGIYNQNLQAVPP-TGS 602
Query: 433 FQVVNHHL--LRDLVELGLWDDNMKDQLIVNNGSIQDIE-GIPQKLKD---LYKTVWEIP 486
+NH + +V K + I G I + P D Y+ +EI
Sbjct: 603 ISYINHSTSSIHPIVS--------KVE-IRKEGKIGRVYYPAPYMTNDNLEYYEDAYEIG 653
Query: 487 QKTVLDMAADRGAFIDQSQSLNIYMAEINYAK-MSSMHFHGWKLGLKTGMYYLRTKPAA 544
+ ++D A +DQ SL ++ + + ++ + W+ G+KT +YY+R + A
Sbjct: 654 YEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQIYAWRKGIKT-LYYIRLRQMA 711
Score = 93 (37.8 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPD 44
R GA A+YL H DI+ FL+ K+ E+ R + L G+ IPD
Sbjct: 262 RQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPD 305
Score = 84 (34.6 bits), Expect = 3.0e-09, Sum P(4) = 3.0e-09
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 783 DWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRR 831
DW LKE + HG+ N L A PT S + I + S P S + R+
Sbjct: 576 DWRRLKESVQAHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSKVEIRK 624
Score = 84 (34.6 bits), Expect = 3.0e-09, Sum P(4) = 3.0e-09
Identities = 17/69 (24%), Positives = 36/69 (52%)
Query: 881 DLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIYMAEINYAK-MSSMHFHGWKLGLKTGM 939
+ Y+ +EI + ++D A +DQ SL ++ + + ++ + W+ G+KT +
Sbjct: 644 EYYEDAYEIGYEKIIDTYAAATQHVDQGLSLTLFFKDTATTRDVNKAQIYAWRKGIKT-L 702
Query: 940 YYLRTKPAA 948
YY+R + A
Sbjct: 703 YYIRLRQMA 711
Score = 54 (24.1 bits), Expect = 3.0e-09, Sum P(4) = 3.0e-09
Identities = 22/81 (27%), Positives = 38/81 (46%)
Query: 689 ILDSQIETGTPYMLYKDACNRKSNQQNLEVIEELYNMVNKETGTRTPMI--SDKHYEIIM 746
+ + Q E+G PY++++D NR +N + ++ N+ ++ TP + D Y +
Sbjct: 365 LAELQFESGYPYIMFEDTVNR-ANPIDGKITHS--NLCSEILQVSTPSLFNEDLSYAKVG 421
Query: 747 K----NADRLNSAIIYDR-DF 762
K N LN A D DF
Sbjct: 422 KDISCNLGSLNIAKTMDSPDF 442
>UNIPROTKB|O53767 [details] [associations]
symbol:nrdZ "Ribonucleoside-diphosphate reductase NrdZ"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000788
InterPro:IPR008926 InterPro:IPR013344 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 PROSITE:PS00089
UniPathway:UPA00326 Pfam:PF03477 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006260 EMBL:BX842573 GO:GO:0031419
InterPro:IPR005144 PROSITE:PS51161 PIR:A70933 RefSeq:NP_215084.1
RefSeq:NP_335005.1 RefSeq:YP_006513903.1 ProteinModelPortal:O53767
SMR:O53767 PRIDE:O53767 EnsemblBacteria:EBMYCT00000000981
EnsemblBacteria:EBMYCT00000071101 GeneID:13318445 GeneID:887666
GeneID:924988 KEGG:mtc:MT0596 KEGG:mtu:Rv0570 KEGG:mtv:RVBD_0570
PATRIC:18123012 TubercuList:Rv0570 eggNOG:COG0209
HOGENOM:HOG000229277 KO:K00525 OMA:QMATFDI ProtClustDB:CLSK790600
GO:GO:0005971 GO:GO:0004748 SUPFAM:SSF48168 TIGRFAMs:TIGR02504
Uniprot:O53767
Length = 692
Score = 214 (80.4 bits), Expect = 8.3e-20, Sum P(3) = 8.3e-20
Identities = 57/185 (30%), Positives = 94/185 (50%)
Query: 176 GKFIRQVPARKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLGTIKCSNLCTEI--VEY 233
GK + ++PA +L+ AI + G P +++ D NR + G I+ +N C E+ + Y
Sbjct: 326 GKIVARMPAAELFDAICKAAHAGGDPGLVFLDTINRANPVPGRGRIEATNPCGEVPLLPY 385
Query: 234 TSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNS 293
S CNL SI L + AD ++ +L++VA + + L+ +IDV+ YP E +
Sbjct: 386 ES------CNLGSINLARML--ADGRVDWDRLEEVAGVAVRFLDDVIDVSRYPFPELGEA 437
Query: 294 NMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQ 353
R IG+GV GLA+L + +P+D E+ L ++ I A AS +A G +
Sbjct: 438 ARATRKIGLGVMGLAELLAALGIPYDSEEAVRLATRLMRRIQQAAHTASRRLAEERGAFP 497
Query: 354 TYEGS 358
+ S
Sbjct: 498 AFTDS 502
Score = 89 (36.4 bits), Expect = 8.3e-20, Sum P(3) = 8.3e-20
Identities = 34/176 (19%), Positives = 71/176 (40%)
Query: 386 KIAKHGVR-NSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDL 444
+ A+ G R N+ + + PT + + I G EP + ++R ++ VN R
Sbjct: 503 RFARSGPRRNAQVTSVAPTGTISLIAGTTAGIEPMFAIAFTRAIVGRHLLEVNPCFDRLA 562
Query: 445 VELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQS 504
+ G + D + + I G ++ +P +++ + T EI + L M A ++ +
Sbjct: 563 RDRGFYRDELIAE-IAQRGGVRGYPRLPAEVRAAFPTAAEIAPQWHLRMQAAVQRHVEAA 621
Query: 505 QSLNIYM-AEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANA 559
S + + A + +++ WK +K Y + + K +A A
Sbjct: 622 VSKTVNLPATATVDDVRAIYVAAWKAKVKGITVYRYGSREGQVLSYAAPKPLLAQA 677
Score = 89 (36.4 bits), Expect = 8.3e-20, Sum P(3) = 8.3e-20
Identities = 34/176 (19%), Positives = 71/176 (40%)
Query: 790 KIAKHGVR-NSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLLRDL 848
+ A+ G R N+ + + PT + + I G EP + ++R ++ VN R
Sbjct: 503 RFARSGPRRNAQVTSVAPTGTISLIAGTTAGIEPMFAIAFTRAIVGRHLLEVNPCFDRLA 562
Query: 849 VELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQS 908
+ G + D + + I G ++ +P +++ + T EI + L M A ++ +
Sbjct: 563 RDRGFYRDELIAE-IAQRGGVRGYPRLPAEVRAAFPTAAEIAPQWHLRMQAAVQRHVEAA 621
Query: 909 QSLNIYM-AEINYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTKMANA 963
S + + A + +++ WK +K Y + + K +A A
Sbjct: 622 VSKTVNLPATATVDDVRAIYVAAWKAKVKGITVYRYGSREGQVLSYAAPKPLLAQA 677
Score = 73 (30.8 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 593 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGS 649
+GV GLA+L + +P+D E+ L ++ I A AS +A G + + S
Sbjct: 446 LGVMGLAELLAALGIPYDSEEAVRLATRLMRRIQQAAHTASRRLAEERGAFPAFTDS 502
Score = 66 (28.3 bits), Expect = 8.3e-20, Sum P(3) = 8.3e-20
Identities = 27/87 (31%), Positives = 39/87 (44%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA L+ H DI DF+ K + E +L G + D F+R VE + L+
Sbjct: 266 RRGACMAVLDVSHPDICDFVTAKAES-PSELPHFNLSVG--VTDAFLRAVERNGLHRLVN 322
Query: 151 PNTCRGLSDS-WGEKFDDLYKKYEAEG 176
P T + ++ E FD + K A G
Sbjct: 323 PRTGKIVARMPAAELFDAICKAAHAGG 349
Score = 61 (26.5 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 26/87 (29%), Positives = 38/87 (43%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA L+ H DI DF+ K + E +L G + D F+R VE + L+
Sbjct: 266 RRGACMAVLDVSHPDICDFVTAKAES-PSELPHFNLSVG--VTDAFLRAVERNGLHRLVN 322
Query: 61 PNACRGLSDS-WGEKFDDLYKKYEAEG 86
P + ++ E FD + K A G
Sbjct: 323 PRTGKIVARMPAAELFDAICKAAHAGG 349
>TIGR_CMR|DET_0623 [details] [associations]
symbol:DET_0623 "ribonucleotide reductase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013344
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
UniPathway:UPA00326 GO:GO:0005524 GO:GO:0006260 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0031419 eggNOG:COG0209
HOGENOM:HOG000229277 KO:K00525 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 TIGRFAMs:TIGR02504 RefSeq:YP_181365.1
ProteinModelPortal:Q3Z8T4 STRING:Q3Z8T4 GeneID:3230018
KEGG:det:DET0623 PATRIC:21608313 OMA:FIDRIND ProtClustDB:CLSK837372
BioCyc:DETH243164:GJNF-624-MONOMER Uniprot:Q3Z8T4
Length = 599
Score = 220 (82.5 bits), Expect = 8.9e-20, Sum P(3) = 8.9e-20
Identities = 57/187 (30%), Positives = 98/187 (52%)
Query: 176 GKFIRQVPARKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLGTIKCSNLCTE--IVEY 233
G+ ++++ A ++ I+D +TG P +++ D N + LG I+ + C E ++ Y
Sbjct: 233 GEVVQRLNAACVFDCIVDQAWKTGDPGLVFIDRINDDNPTPELGRIRHVSGCGEQTLLPY 292
Query: 234 TSKDEVAVCNLASIAL-NMYINPADKTY-NFTKLKDVAKIVTKNLNKIIDVNFYPVEEAR 291
S CNL SI+L M ++ ++ KL K+ + L+ +IDVN +P E
Sbjct: 293 ES------CNLGSISLPRMLKRDGERVVVDYEKLGRTVKMAIRFLDNVIDVNRFPTPEIE 346
Query: 292 NSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGP 351
+ +R+R IG+GV G AD+ + M +P++ E+ QI E I + AS ++A G
Sbjct: 347 KATLRNRKIGLGVMGFADMLVLMGIPYNSEEAIFQADQIMEFIKETSHRASSKLAEARGS 406
Query: 352 YQTYEGS 358
+ YEGS
Sbjct: 407 FPAYEGS 413
Score = 88 (36.0 bits), Expect = 8.9e-20, Sum P(3) = 8.9e-20
Identities = 32/143 (22%), Positives = 64/143 (44%)
Query: 392 VRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQV-VNHHLLRDLVELGLW 450
+RN+ + PT + + I G + EP + ++ R +L GE + +N + G
Sbjct: 423 MRNATCTSIAPTGTLSIIAGVSSGIEPSFAMVFVRNILDGENLLEINPYFEEMARREGFH 482
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNI- 509
+ ++L+ +N + D+E +P LK L T I + + + A + D + S +
Sbjct: 483 SKELFEKLVSSN-HLHDMECVPDWLKRLLVTAHRIRPEWHIRIQAAFQKYTDNAVSKTVN 541
Query: 510 YMAEINYAKMSSMHFHGWKLGLK 532
+ E M+++ + GLK
Sbjct: 542 FSHEATREDMANVFNLAYDKGLK 564
Score = 88 (36.0 bits), Expect = 8.9e-20, Sum P(3) = 8.9e-20
Identities = 32/143 (22%), Positives = 64/143 (44%)
Query: 796 VRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQV-VNHHLLRDLVELGLW 854
+RN+ + PT + + I G + EP + ++ R +L GE + +N + G
Sbjct: 423 MRNATCTSIAPTGTLSIIAGVSSGIEPSFAMVFVRNILDGENLLEINPYFEEMARREGFH 482
Query: 855 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQSQSLNI- 913
+ ++L+ +N + D+E +P LK L T I + + + A + D + S +
Sbjct: 483 SKELFEKLVSSN-HLHDMECVPDWLKRLLVTAHRIRPEWHIRIQAAFQKYTDNAVSKTVN 541
Query: 914 YMAEINYAKMSSMHFHGWKLGLK 936
+ E M+++ + GLK
Sbjct: 542 FSHEATREDMANVFNLAYDKGLK 564
Score = 57 (25.1 bits), Expect = 8.9e-20, Sum P(3) = 8.9e-20
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 82 YEAEGLVYFRPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVE 141
Y +G V R G A L+ H DI F+ K + + + + + EFM +V
Sbjct: 167 YVRQGGV--RRGCNAAILDVTHPDILKFISCKGDPNA----LTNFYISVVVTREFMTKVR 220
Query: 142 SDAQWSLMCPNT 153
S + ++ P+T
Sbjct: 221 SGEDYDIINPHT 232
Score = 51 (23.0 bits), Expect = 3.7e-19, Sum P(3) = 3.7e-19
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R G A L+ H DI F+ K + + + + + EFM +V S + ++
Sbjct: 174 RRGCNAAILDVTHPDILKFISCKGDPNA----LTNFYISVVVTREFMTKVRSGEDYDIIN 229
Query: 61 PN 62
P+
Sbjct: 230 PH 231
>TIGR_CMR|CHY_0676 [details] [associations]
symbol:CHY_0676 "ribonucleoside-diphosphate reductase,
adenosylcobalamin-dependent, intein-containing" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0015949 "nucleobase-containing small molecule interconversion"
evidence=ISS] InterPro:IPR000788 InterPro:IPR004042
InterPro:IPR006141 InterPro:IPR006142 InterPro:IPR008926
InterPro:IPR013344 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR00379 PROSITE:PS50817 PROSITE:PS50819 UniPathway:UPA00326
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006260
GO:GO:0004519 GO:GO:0031419 InterPro:IPR003587 SMART:SM00306
GO:GO:0016539 TIGRFAMs:TIGR01445 eggNOG:COG0209
HOGENOM:HOG000229277 KO:K00525 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 TIGRFAMs:TIGR02504 InterPro:IPR024434 Pfam:PF12637
RefSeq:YP_359531.1 STRING:Q3AEA3 GeneID:3727979 KEGG:chy:CHY_0676
PATRIC:21274485 OMA:IFDAVKH BioCyc:CHYD246194:GJCN-676-MONOMER
Uniprot:Q3AEA3
Length = 1101
Score = 175 (66.7 bits), Expect = 3.0e-18, Sum P(4) = 3.0e-18
Identities = 39/117 (33%), Positives = 63/117 (53%)
Query: 242 CNLASIALNMYINPADKTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNMRHRPIG 301
CNL SI L + D ++ L+ K+ + L+ +IDVN YP+ E + R IG
Sbjct: 627 CNLGSINLANMVK--DGEIDWEHLEKTVKLAVRFLDNVIDVNHYPLPEIEKMTKKTRKIG 684
Query: 302 IGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTYEGS 358
+GV G AD+ I++ +P+D E+ L ++ E I + EAS E+A G + ++ S
Sbjct: 685 LGVMGFADMLIKLNIPYDSEEALNLADKVMEFINKKSKEASAELARVRGTFPAWKKS 741
Score = 110 (43.8 bits), Expect = 3.0e-18, Sum P(4) = 3.0e-18
Identities = 43/179 (24%), Positives = 74/179 (41%)
Query: 382 ALKEKI-AKHGV--RNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNH 438
A K+ + AK G+ RN+ PT S + I G + EP + + R +L + V H
Sbjct: 737 AWKKSVWAKKGLKLRNATTTTIAPTGSISIIAGVSSGIEPVFALAFKRHILDRKDIVEVH 796
Query: 439 HLLRDLV-ELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADR 497
L E G + + + ++ + G I I G+P++ K L+ T +I + + M A
Sbjct: 797 RLFEQHARENGYYSEKLMNE-VAKTGRITGIAGVPEEAKRLFVTALDIAPEWHVKMQAVF 855
Query: 498 GAFIDQSQSLNIYMAE-INYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTK 555
D + S I M + + +KLG K Y + +++TK
Sbjct: 856 QKHTDNAVSKTINMPNSATVEDVKESYLLAYKLGCKGLTVYRDGSREEQVLNAGLNETK 914
Score = 110 (43.8 bits), Expect = 3.0e-18, Sum P(4) = 3.0e-18
Identities = 43/179 (24%), Positives = 74/179 (41%)
Query: 786 ALKEKI-AKHGV--RNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNH 842
A K+ + AK G+ RN+ PT S + I G + EP + + R +L + V H
Sbjct: 737 AWKKSVWAKKGLKLRNATTTTIAPTGSISIIAGVSSGIEPVFALAFKRHILDRKDIVEVH 796
Query: 843 HLLRDLV-ELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADR 901
L E G + + + ++ + G I I G+P++ K L+ T +I + + M A
Sbjct: 797 RLFEQHARENGYYSEKLMNE-VAKTGRITGIAGVPEEAKRLFVTALDIAPEWHVKMQAVF 855
Query: 902 GAFIDQSQSLNIYMAE-INYAKMSSMHFHGWKLGLKTGMYYLRTKPAANAIQFTIDKTK 959
D + S I M + + +KLG K Y + +++TK
Sbjct: 856 QKHTDNAVSKTINMPNSATVEDVKESYLLAYKLGCKGLTVYRDGSREEQVLNAGLNETK 914
Score = 64 (27.6 bits), Expect = 3.0e-18, Sum P(4) = 3.0e-18
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLF-YGLWIPDEFMRRVESDAQWSLM 149
R GA L H DI +F+ T KE+ R F + + D+FM+ +E D ++ L+
Sbjct: 161 RRGANMGVLRCDHPDILEFI-----TAKEDNRDITNFNISVALTDKFMKALEEDGEYELI 215
Query: 150 CPNT 153
P+T
Sbjct: 216 EPST 219
Score = 60 (26.2 bits), Expect = 3.0e-18, Sum P(4) = 3.0e-18
Identities = 18/74 (24%), Positives = 38/74 (51%)
Query: 166 DDLYKKYE-AEGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLGTIKCS 224
D Y+ E + G+ + ++ AR+++ I + + G P +++ D N + LG I+ +
Sbjct: 209 DGEYELIEPSTGEVVGRLRAREVFERIARNAWKNGEPGVIFIDRINAANVVPELGEIEST 268
Query: 225 NLCT--EIVEYTSK 236
N C + + +T K
Sbjct: 269 NPCVTGDTLVFTDK 282
Score = 59 (25.8 bits), Expect = 9.5e-18, Sum P(4) = 9.5e-18
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLF-YGLWIPDEFMRRVESDAQWSLM 59
R GA L H DI +F+ T KE+ R F + + D+FM+ +E D ++ L+
Sbjct: 161 RRGANMGVLRCDHPDILEFI-----TAKEDNRDITNFNISVALTDKFMKALEEDGEYELI 215
Query: 60 CPN 62
P+
Sbjct: 216 EPS 218
>UNIPROTKB|Q0C1X7 [details] [associations]
symbol:HNE_1555 "Ribonucleoside-diphosphate reductase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR013344 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 UniPathway:UPA00326
GO:GO:0005524 GO:GO:0006260 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0031419 GO:GO:0009265 eggNOG:COG0209 KO:K00525 OMA:QMATFDI
GO:GO:0005971 GO:GO:0004748 TIGRFAMs:TIGR02504 InterPro:IPR024434
Pfam:PF12637 RefSeq:YP_760266.1 STRING:Q0C1X7 GeneID:4287134
KEGG:hne:HNE_1555 PATRIC:32215933 HOGENOM:HOG000229278
ProtClustDB:CLSK2780972 BioCyc:HNEP228405:GI69-1588-MONOMER
Uniprot:Q0C1X7
Length = 731
Score = 245 (91.3 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 73/257 (28%), Positives = 126/257 (49%)
Query: 176 GKFIRQVPARKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLGTIKCSNLCTEIVEYTS 235
G+ R +PA LW ++ + + P +++ D N +N ++ TI SN C E +
Sbjct: 216 GQPYRSLPASGLWDRLMQATYDAAEPGVIFVDRVNALNNLADIETISASNPCGEQM---- 271
Query: 236 KDEVAVCNLASIALNMYIN-P--ADKTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARN 292
C L SI L ++ P AD T+L+ + + + L+ +ID++ YP+E+
Sbjct: 272 LPPYGACLLGSINLARLVSSPFEADAKIELTELETLTETAIRFLDNVIDISRYPLEQQGE 331
Query: 293 SNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPY 352
R +G+GV GLAD I + +++ L+++ I A AS +AA GPY
Sbjct: 332 EARAKRRLGLGVTGLADALIFCGAAYGSDKAVALSERWMGAIKRAAYRASAHLAAEKGPY 391
Query: 353 QTYEGSPVSQGILQYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGN 412
++ + + + ++ G+ P D AL I++HG+RN L + PT +T+ + N
Sbjct: 392 PLFDKAILDRP----NLLGLDP----DTRAL---ISEHGLRNGCLTSIAPTGTTSLLADN 440
Query: 413 NES-FEPYTSNIYSRRV 428
S EP + YSR+V
Sbjct: 441 VSSGVEPVFAFSYSRKV 457
Score = 62 (26.9 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSL 58
R GA L H DI F++ K++ + FR +L + + DEFM +E+ W+L
Sbjct: 159 RRGAMMGCLRIDHPDIEAFIDAKRDGAR--FRNFNL--SVLVTDEFMAALEAGRDWTL 212
>UNIPROTKB|P39452 [details] [associations]
symbol:nrdE species:83333 "Escherichia coli K-12"
[GO:0005737 "cytoplasm" evidence=ISA] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=IGI] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA;IGI]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA;IGI] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IGI] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013346 InterPro:IPR013509 InterPro:IPR013554
Pfam:PF00317 Pfam:PF02867 Pfam:PF08343 PRINTS:PR01183
PROSITE:PS00089 UniPathway:UPA00326 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006260 GO:GO:0015949 GO:GO:0009263 EMBL:X79787
eggNOG:COG0209 KO:K00525 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 TIGRFAMs:TIGR02506 HOGENOM:HOG000246165 OMA:VSRIEIR
ProtClustDB:PRK08188 InterPro:IPR026459 TIGRFAMs:TIGR04170
EMBL:M31530 PIR:D65047 RefSeq:NP_417161.1 RefSeq:YP_490890.1
ProteinModelPortal:P39452 SMR:P39452 DIP:DIP-359N IntAct:P39452
PRIDE:P39452 EnsemblBacteria:EBESCT00000003305
EnsemblBacteria:EBESCT00000016977 GeneID:12930227 GeneID:947155
KEGG:ecj:Y75_p2618 KEGG:eco:b2675 PATRIC:32120740 EchoBASE:EB4158
EcoGene:EG20257 BioCyc:EcoCyc:NRDE-MONOMER
BioCyc:ECOL316407:JW2650-MONOMER BioCyc:MetaCyc:NRDE-MONOMER
Genevestigator:P39452 Uniprot:P39452
Length = 714
Score = 246 (91.7 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 110/475 (23%), Positives = 197/475 (41%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA A+YL H DI FL+ K+ E+ R + L G+ IPD + +AQ +L
Sbjct: 251 RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFS 310
Query: 151 PNTCRGLSDSWGEKFDDL-----YKKYEAEGKFIRQ-VPARKLWFAILDSQIETGTPYML 204
P + +G+ F D+ Y + A+ + ++ + AR + + + Q E+G PY++
Sbjct: 311 PYDVERV---YGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIM 367
Query: 205 YKDACNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLA------SIALNM-YINPAD 257
Y+D NR + G I SNLC+EI++ S E NL I+ N+ +N A
Sbjct: 368 YEDTVNRAN--PIAGRINMSNLCSEILQVNSASEYDE-NLDYTRTGHDISCNLGSLNIAH 424
Query: 258 KTYNFTKLKDVAKIVTKNLNKIIDVNFY-PVEEARNSNMRHRPIGIGVQGLADLFIQMRL 316
T + + + L + D++ V N IG+G L + +
Sbjct: 425 -TMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGI 483
Query: 317 PFDCNESRLLNKQIFETIYYGALEASCEIAARDGP-YQTYEGSPVSQG--ILQYDMWGVT 373
+ E+ F I + AL S +A G + ++ S + G QY + G
Sbjct: 484 AYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQY-LQG-- 540
Query: 374 PTDLWDWAALKEKIAKHGVRNSLLIAPMPTAST-AQILGNNESFEPYTSNIYSRRVLSGE 432
+W K+ + R+ + + PT AQ+ + + Y N+ + +G
Sbjct: 541 -----NWQPKTAKVGELFTRSGITL---PTREMWAQLRDDVMRYGIYNQNLQAVPP-TGS 591
Query: 433 FQVVNHHL--LRDLVELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTV 490
+NH + +V K + E + LY+ +EI + +
Sbjct: 592 ISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLA-----LYQDAYEIGAEKI 646
Query: 491 LDMAADRGAFIDQSQSLNIYMAEINYAK-MSSMHFHGWKLGLKTGMYYLRTKPAA 544
+D A+ +DQ SL ++ + + ++ + W+ G+KT +YY+R + A
Sbjct: 647 IDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LYYIRLRQMA 700
Score = 104 (41.7 bits), Expect = 6.2e-10, Sum P(4) = 6.2e-10
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA A+YL H DI FL+ K+ E+ R + L G+ IPD + +AQ +L
Sbjct: 251 RQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFS 310
Query: 61 P 61
P
Sbjct: 311 P 311
Score = 91 (37.1 bits), Expect = 6.2e-10, Sum P(4) = 6.2e-10
Identities = 18/68 (26%), Positives = 37/68 (54%)
Query: 882 LYKTVWEIPQKTVLDMAADRGAFIDQSQSLNIYMAEINYAK-MSSMHFHGWKLGLKTGMY 940
LY+ +EI + ++D A+ +DQ SL ++ + + ++ + W+ G+KT +Y
Sbjct: 634 LYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKT-LY 692
Query: 941 YLRTKPAA 948
Y+R + A
Sbjct: 693 YIRLRQMA 700
Score = 69 (29.3 bits), Expect = 6.2e-10, Sum P(4) = 6.2e-10
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 775 GVT-PTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRR 831
G+T PT WA L++ + ++G+ N L A PT S + I S P + + R+
Sbjct: 557 GITLPTREM-WAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK 613
Score = 57 (25.1 bits), Expect = 6.2e-10, Sum P(4) = 6.2e-10
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 689 ILDSQIETGTPYMLYKDACNR 709
+ + Q E+G PY++Y+D NR
Sbjct: 354 LAEIQFESGYPYIMYEDTVNR 374
>TIGR_CMR|DET_0345 [details] [associations]
symbol:DET_0345 "ribonucleotide reductase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013344
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
UniPathway:UPA00326 GO:GO:0005524 GO:GO:0006260 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0031419 eggNOG:COG0209
HOGENOM:HOG000229277 KO:K00525 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 TIGRFAMs:TIGR02504 InterPro:IPR024434 Pfam:PF12637
OMA:IFDAVKH RefSeq:YP_181092.1 ProteinModelPortal:Q3Z9K7
STRING:Q3Z9K7 GeneID:3230364 KEGG:det:DET0345 PATRIC:21607759
ProtClustDB:PRK08665 BioCyc:DETH243164:GJNF-345-MONOMER
Uniprot:Q3Z9K7
Length = 761
Score = 204 (76.9 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 52/187 (27%), Positives = 96/187 (51%)
Query: 176 GKFIRQVPARKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLGTIKCSNLCTE--IVEY 233
G+ + ++ A +++ I+ +TG P +++ D N + LG I+ +N C E ++ Y
Sbjct: 239 GEVVSRLNATEVFNKIVHMAWKTGDPGIVFIDRINAYNPTPQLGRIESTNPCGEQPLLPY 298
Query: 234 TSKDEVAVCNLASIALN--MYINPADKTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEAR 291
S CNL SI L+ + ++ ++ KL V K + L+ +IDVN +P+ +
Sbjct: 299 ES------CNLGSINLSRMVTVSGGQAVVDYKKLSRVVKSAVRFLDNVIDVNKFPLPQIE 352
Query: 292 NSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGP 351
+ R IG+GV G AD+ +++ +P++ S L ++I + A + S E+A G
Sbjct: 353 EMTKKSRKIGLGVMGFADMLLELGIPYNSENSIKLAEEIMCFVNEEAHKFSSELAVERGV 412
Query: 352 YQTYEGS 358
+ Y GS
Sbjct: 413 FPAYRGS 419
Score = 85 (35.0 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 392 VRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQV-VNHHLLRDLVELGLW 450
+RN+ PT + + I G + EP+ + ++R +L G + VN + R E G +
Sbjct: 428 MRNASCTTIAPTGTLSIIAGCSSGIEPHFALCFTRNILDGTKMIEVNPYFERAAKEGGYY 487
Query: 451 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI-PQKTVLDMAA 495
+ + L G+ D +P + K+L+ T +I P+ V AA
Sbjct: 488 SEELIKSLA--EGAHLDEADVPAEAKELFVTAHQIVPEWHVRIQAA 531
Score = 85 (35.0 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 796 VRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQV-VNHHLLRDLVELGLW 854
+RN+ PT + + I G + EP+ + ++R +L G + VN + R E G +
Sbjct: 428 MRNASCTTIAPTGTLSIIAGCSSGIEPHFALCFTRNILDGTKMIEVNPYFERAAKEGGYY 487
Query: 855 DDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEI-PQKTVLDMAA 899
+ + L G+ D +P + K+L+ T +I P+ V AA
Sbjct: 488 SEELIKSLA--EGAHLDEADVPAEAKELFVTAHQIVPEWHVRIQAA 531
Score = 50 (22.7 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA L H DI F+ K G + + I D+FM+ V+ + L+
Sbjct: 180 RRGANMAILSIDHPDIMKFIHAKDKAGV----LTNFNLSVAITDKFMQAVKDGVDYDLLN 235
Query: 61 PN 62
P+
Sbjct: 236 PH 237
Score = 50 (22.7 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA L H DI F+ K G + + I D+FM+ V+ + L+
Sbjct: 180 RRGANMAILSIDHPDIMKFIHAKDKAGV----LTNFNLSVAITDKFMQAVKDGVDYDLLN 235
Query: 151 PN 152
P+
Sbjct: 236 PH 237
>TIGR_CMR|SPO_3194 [details] [associations]
symbol:SPO_3194 "ribonucleoside-diphosphate reductase,
putative" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR013344 InterPro:IPR013509
Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183 UniPathway:UPA00326
GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006260
GO:GO:0031419 KO:K00525 OMA:QMATFDI GO:GO:0005971 GO:GO:0004748
TIGRFAMs:TIGR02504 InterPro:IPR024434 Pfam:PF12637
HOGENOM:HOG000229278 RefSeq:YP_168397.1 ProteinModelPortal:Q5LNK9
GeneID:3192944 KEGG:sil:SPO3194 PATRIC:23379835
ProtClustDB:CLSK934086 Uniprot:Q5LNK9
Length = 760
Score = 219 (82.2 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 70/287 (24%), Positives = 123/287 (42%)
Query: 175 EGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLGTIKCSNLCTEIVEYT 234
+GK V AR LW I+ + + P +++ D N +N + TI +N C E
Sbjct: 216 DGKVYHTVEARTLWNKIMQATYDYAEPGVIFIDRINAANNLNYVETIAATNPCGE----Q 271
Query: 235 SKDEVAVCNLASIALNMYI-NPADKTYNFTK--LKDVAKIVTKNLNKIIDVNFYPVEEAR 291
C L S+ L + NP + L+ + + ++ ++D + +P+ E
Sbjct: 272 PLPPYGACLLGSVNLARLVSNPFEDAAELDPEALQKLVATAVRMMDNVVDASRFPLPEQA 331
Query: 292 NSNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGP 351
R IG+GV GLAD + + L + +E+ + I A AS E+A G
Sbjct: 332 AEAQNKRRIGLGVTGLADALLMLGLRYGSDEAAKQTEDWLHAIARAAYLASVELAKEKGA 391
Query: 352 YQTYEGSP-VSQGILQYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQIL 410
+ ++ ++ G ++ D+ +E I HG+RN+LL + PT + +
Sbjct: 392 FPLFDAEKYLASGTMR-----AMDEDV------REAIRTHGIRNALLTSIAPTGTISLYA 440
Query: 411 GNNES-FEPYTSNIYSRRVLSGEFQVVNHHLLRDLVELGLWDDNMKD 456
GN S EP + Y+R+VL + ++ V++ W D D
Sbjct: 441 GNVSSGIEPVFAYAYTRKVLQKDGSRTEEEVVDYAVQM--WRDKFAD 485
Score = 57 (25.1 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSL 58
R GA + H DI F+ K + R R + + D FM V++D W L
Sbjct: 160 RRGAMMATMRCDHPDIEQFIGAKSDPA----RLRMFNMSVLVTDAFMEAVKADGSWEL 213
Score = 57 (25.1 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSL 148
R GA + H DI F+ K + R R + + D FM V++D W L
Sbjct: 160 RRGAMMATMRCDHPDIEQFIGAKSDPA----RLRMFNMSVLVTDAFMEAVKADGSWEL 213
>TIGR_CMR|GSU_1871 [details] [associations]
symbol:GSU_1871 "ribonucleoside-diphosphate reductase,
putative" species:243231 "Geobacter sulfurreducens PCA" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0009265 "2'-deoxyribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000788 InterPro:IPR008926
InterPro:IPR013344 InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867
PRINTS:PR01183 UniPathway:UPA00326 GO:GO:0005524 GO:GO:0006260
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0031419
HOGENOM:HOG000229277 KO:K00525 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 TIGRFAMs:TIGR02504 InterPro:IPR024434 Pfam:PF12637
OMA:IFDAVKH ProtClustDB:PRK08665 RefSeq:NP_952920.1
ProteinModelPortal:Q74C05 GeneID:2686773 KEGG:gsu:GSU1871
PATRIC:22026607 BioCyc:GSUL243231:GH27-1839-MONOMER Uniprot:Q74C05
Length = 743
Score = 208 (78.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 73/282 (25%), Positives = 128/282 (45%)
Query: 175 EGKFIRQVPARKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLGTIKCSNLCTE--IVE 232
+GK + ARK++ I+ + G P +++ D N+ + ++G I+ +N C E ++
Sbjct: 230 DGKPCGTLNARKVFSRIVKQAWKNGEPGIIFLDRLNKDNPTPHVGVIESTNPCGEQPLLP 289
Query: 233 YTSKDEVAVCNLASIALNMYINPADKTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARN 292
Y S CNL SI L + D N+ +L+DV ++ L+ +I+VN YP+ +
Sbjct: 290 YES------CNLGSINLGKMVKNGD--VNWDRLRDVVRLAVHFLDNVIEVNNYPLPQISE 341
Query: 293 SNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPY 352
+R IG+GV G AD+ I + +P++ ++ L +++ I S E+AA G +
Sbjct: 342 MTRANRKIGLGVMGWADMLILLGIPYNSPQAISLGEKVMRFINDEGHVYSRELAAVRGSF 401
Query: 353 QTYEGS---PVSQG-ILQYDMWGVTPTDLWDWAALKEKIAKHGVRNSLLIAPMPTASTAQ 408
+ GS S+G I + + PT A A GV ++ +
Sbjct: 402 PNFAGSIYDRASEGPIRNATVTTIAPTGTISIIAN----ASSGVEPLFAVSFIRQVLDKN 457
Query: 409 ILGN-NESFEPYTSN--IYSRRVLSGEFQVVNHHLLRDLVEL 447
IL N FE YS ++ ++ H + DL E+
Sbjct: 458 ILVEVNPIFEEVARQRGFYSEELMQ---KIARHGTIHDLPEI 496
Score = 98 (39.6 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 30/154 (19%), Positives = 73/154 (47%)
Query: 786 ALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQVVNHHLL 845
++ ++ ++ +RN+ + PT + + I + EP + + R+VL V + +
Sbjct: 407 SIYDRASEGPIRNATVTTIAPTGTISIIANASSGVEPLFAVSFIRQVLDKNILVEVNPIF 466
Query: 846 RDLV-ELGLWDDNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAF 904
++ + G + + + Q I +G+I D+ IP+ ++ ++ T +I + ++M A +
Sbjct: 467 EEVARQRGFYSEELM-QKIARHGTIHDLPEIPEDIRKIFVTAHDITPEDHIEMQAAFQKY 525
Query: 905 IDQSQSLNIYMAEINYAKMSSMHFHGWKLGLKTG 938
D + S + N A + + ++L K+G
Sbjct: 526 TDNAVSKTVNFP--NSAAIEDVE-KVYRLAYKSG 556
Score = 71 (30.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 586 RDNKEDCIGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQT 645
R N++ +GV G AD+ I + +P++ ++ L +++ I S E+AA G +
Sbjct: 344 RANRKIGLGVMGWADMLILLGIPYNSPQAISLGEKVMRFINDEGHVYSRELAAVRGSFPN 403
Query: 646 YEGS 649
+ GS
Sbjct: 404 FAGS 407
Score = 58 (25.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 1 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 60
R GA L H DI DF+ K + ++ ++ GL + FM VE DA + L+
Sbjct: 172 RRGANMGILRVDHPDIMDFIMCKDD--QKHLNNFNISVGL--TEAFMEAVERDADYDLIN 227
Query: 61 P 61
P
Sbjct: 228 P 228
Score = 58 (25.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 91 RPGAFAIYLEPWHGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMC 150
R GA L H DI DF+ K + ++ ++ GL + FM VE DA + L+
Sbjct: 172 RRGANMGILRVDHPDIMDFIMCKDD--QKHLNNFNISVGL--TEAFMEAVERDADYDLIN 227
Query: 151 P 151
P
Sbjct: 228 P 228
>TIGR_CMR|DET_0244 [details] [associations]
symbol:DET_0244 "ribonucleotide reductase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000788 InterPro:IPR008926 InterPro:IPR013344
InterPro:IPR013509 Pfam:PF00317 Pfam:PF02867 PRINTS:PR01183
UniPathway:UPA00326 GO:GO:0005524 GO:GO:0006260 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0031419 eggNOG:COG0209
HOGENOM:HOG000229277 KO:K00525 GO:GO:0005971 GO:GO:0004748
SUPFAM:SSF48168 TIGRFAMs:TIGR02504 RefSeq:YP_180992.1
ProteinModelPortal:Q3Z9V7 STRING:Q3Z9V7 GeneID:3230414
KEGG:det:DET0244 PATRIC:21607559 OMA:SANFGIN ProtClustDB:CLSK741634
BioCyc:DETH243164:GJNF-244-MONOMER Uniprot:Q3Z9V7
Length = 585
Score = 144 (55.7 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 47/190 (24%), Positives = 90/190 (47%)
Query: 176 GKFIRQVPARKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLGTIKCSNLC--TEIVEY 233
G+ + A ++++ I S ETG P +++ D N+ + LG ++ C ++ Y
Sbjct: 220 GRVSGSLSAAEVFYRIARSSWETGDPGIMFIDRINKDNPTPRLGEFITTDPCGGQPLLPY 279
Query: 234 TSKDEVAVCNLASIALNMYINPADKTYNFTKLKD-VAKIVTKNLNKIIDVNFYPVEEARN 292
S + NL+ + L N Y +L +AK V + L+ +++VN YP E
Sbjct: 280 ESAT-LGTINLSGMLLKEG-NCCRVDY--PRLGGLIAKAV-RFLDDVLEVNRYPSAEVEK 334
Query: 293 SNMRHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPY 352
+ R IG+G G A++ I++ + +D E+ ++ + A +A+ E+A G +
Sbjct: 335 AARATRKIGLGFMGFAEMLIKLGIRYDSAEAVSAADELMAFVKEAACQATEELALERGAF 394
Query: 353 QTYEGSPVSQ 362
+ GS +Q
Sbjct: 395 PAFAGSIYAQ 404
Score = 78 (32.5 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 31/143 (21%), Positives = 62/143 (43%)
Query: 393 RNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQV-VNHHLLRDLVELGLWD 451
RN+ + T +T+ I + P S + R +L G+ + +NH E G +
Sbjct: 411 RNATCLTFTNTGTTSIIADTSVGIHPIYSLVMVRNILDGQRLLDINHAFEETARERGFFS 470
Query: 452 DNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQ--SQSLNI 509
+ ++L+ E IP+ + L T +I + + + A + D SQ++N
Sbjct: 471 PALIEKLLTGESPCNCPE-IPEDYRRLLVTARDIQPEWCIRVQAAFQKYTDNAISQTVN- 528
Query: 510 YMAEINYAKMSSMHFHGWKLGLK 532
+ A+ + ++ + +LGLK
Sbjct: 529 FPADASVEDIADLFLKAHELGLK 551
Score = 78 (32.5 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 31/143 (21%), Positives = 62/143 (43%)
Query: 797 RNSLLIAPMPTASTAQILGNNESFEPYTSNIYSRRVLSGEFQV-VNHHLLRDLVELGLWD 855
RN+ + T +T+ I + P S + R +L G+ + +NH E G +
Sbjct: 411 RNATCLTFTNTGTTSIIADTSVGIHPIYSLVMVRNILDGQRLLDINHAFEETARERGFFS 470
Query: 856 DNMKDQLIVNNGSIQDIEGIPQKLKDLYKTVWEIPQKTVLDMAADRGAFIDQ--SQSLNI 913
+ ++L+ E IP+ + L T +I + + + A + D SQ++N
Sbjct: 471 PALIEKLLTGESPCNCPE-IPEDYRRLLVTARDIQPEWCIRVQAAFQKYTDNAISQTVN- 528
Query: 914 YMAEINYAKMSSMHFHGWKLGLK 936
+ A+ + ++ + +LGLK
Sbjct: 529 FPADASVEDIADLFLKAHELGLK 551
Score = 50 (22.7 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 103 HGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMCPNTCR 155
H DI F+ K E + + + + D+F+R+V + L+ P T R
Sbjct: 173 HPDILKFIRAKD----EGSHSANFGINIALTDDFIRKVRRGEDYELVNPRTGR 221
Score = 45 (20.9 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 13 HGDIFDFLELKKNTGKEEFRARDLFYGLWIPDEFMRRVESDAQWSLMCPNACR 65
H DI F+ K E + + + + D+F+R+V + L+ P R
Sbjct: 173 HPDILKFIRAKD----EGSHSANFGINIALTDDFIRKVRRGEDYELVNPRTGR 221
>UNIPROTKB|Q5LRJ1 [details] [associations]
symbol:nrdJ "Ribonucleoside-diphosphate reductase,
adenosylcobalamin-dependent" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000788 InterPro:IPR013344
InterPro:IPR013678 Pfam:PF02867 Pfam:PF08471 GO:GO:0000166
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006260 GO:GO:0050897
GO:GO:0031419 GO:GO:0009263 KO:K00525 GO:GO:0005971 GO:GO:0004748
TIGRFAMs:TIGR02504 Gene3D:1.10.10.200 InterPro:IPR017856
InterPro:IPR024434 Pfam:PF12637 RefSeq:YP_167364.1
ProteinModelPortal:Q5LRJ1 GeneID:3192806 KEGG:sil:SPO2136
PATRIC:23377617 HOGENOM:HOG000021770 OMA:FLWRSVP
ProtClustDB:PRK07562 Uniprot:Q5LRJ1
Length = 1214
Score = 142 (55.0 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 48/181 (26%), Positives = 76/181 (41%)
Query: 176 GKFIRQVPARKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLGTIKCSNLCTEIVEYTS 235
GK + V AR LW + + P + + D N G I+ SN C+E Y
Sbjct: 417 GKVAKTVKARDLWEKVGHAAWACADPGIQFHDTVNDWHTCPADGPIRGSNPCSE---YMF 473
Query: 236 KDEVAVCNLASIALNMYINPADKTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNM 295
D+ A CNLAS+ L ++ D + ++ T L + + +P +E +
Sbjct: 474 LDDTA-CNLASMNLLTFLK--DGEFQAEDYIHATRLWTLTLEISVTMAQFPSKEIAQLSY 530
Query: 296 RHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTY 355
R +G+G + L + M +D +E R L + + A S EIA GP+ Y
Sbjct: 531 DFRTLGLGYANIGGLLMNMGYGYDSDEGRALCGALTAIMTGVAYATSAEIAGELGPFAGY 590
Query: 356 E 356
E
Sbjct: 591 E 591
Score = 59 (25.8 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 378 WDWA-ALKEKIAKHGVRNSLLIAPMPTASTAQILG-NNESFEPYTSNIYSRRVLSGE-FQ 434
WD A +L EK +G RN+ PT + ++ + EP + + +++ G F+
Sbjct: 643 WDEALSLGEK---NGYRNAQSTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFK 699
Query: 435 VVNHHLLRDLVELGLWDDNMKD--QLIVNNGSIQDIEGI 471
++N + L LG +++ V +G+I + GI
Sbjct: 700 IINRSVPAALENLGYSSAQIEEIVSYAVGHGTIGNAPGI 738
>TIGR_CMR|SPO_2136 [details] [associations]
symbol:SPO_2136 "ribonucleoside-diphosphate reductase,
adenosylcobalamin-dependent" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000788 InterPro:IPR013344
InterPro:IPR013678 Pfam:PF02867 Pfam:PF08471 GO:GO:0000166
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006260 GO:GO:0050897
GO:GO:0031419 GO:GO:0009263 KO:K00525 GO:GO:0005971 GO:GO:0004748
TIGRFAMs:TIGR02504 Gene3D:1.10.10.200 InterPro:IPR017856
InterPro:IPR024434 Pfam:PF12637 RefSeq:YP_167364.1
ProteinModelPortal:Q5LRJ1 GeneID:3192806 KEGG:sil:SPO2136
PATRIC:23377617 HOGENOM:HOG000021770 OMA:FLWRSVP
ProtClustDB:PRK07562 Uniprot:Q5LRJ1
Length = 1214
Score = 142 (55.0 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 48/181 (26%), Positives = 76/181 (41%)
Query: 176 GKFIRQVPARKLWFAILDSQIETGTPYMLYKDACNRKSNQQNLGTIKCSNLCTEIVEYTS 235
GK + V AR LW + + P + + D N G I+ SN C+E Y
Sbjct: 417 GKVAKTVKARDLWEKVGHAAWACADPGIQFHDTVNDWHTCPADGPIRGSNPCSE---YMF 473
Query: 236 KDEVAVCNLASIALNMYINPADKTYNFTKLKDVAKIVTKNLNKIIDVNFYPVEEARNSNM 295
D+ A CNLAS+ L ++ D + ++ T L + + +P +E +
Sbjct: 474 LDDTA-CNLASMNLLTFLK--DGEFQAEDYIHATRLWTLTLEISVTMAQFPSKEIAQLSY 530
Query: 296 RHRPIGIGVQGLADLFIQMRLPFDCNESRLLNKQIFETIYYGALEASCEIAARDGPYQTY 355
R +G+G + L + M +D +E R L + + A S EIA GP+ Y
Sbjct: 531 DFRTLGLGYANIGGLLMNMGYGYDSDEGRALCGALTAIMTGVAYATSAEIAGELGPFAGY 590
Query: 356 E 356
E
Sbjct: 591 E 591
Score = 59 (25.8 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 378 WDWA-ALKEKIAKHGVRNSLLIAPMPTASTAQILG-NNESFEPYTSNIYSRRVLSGE-FQ 434
WD A +L EK +G RN+ PT + ++ + EP + + +++ G F+
Sbjct: 643 WDEALSLGEK---NGYRNAQSTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFK 699
Query: 435 VVNHHLLRDLVELGLWDDNMKD--QLIVNNGSIQDIEGI 471
++N + L LG +++ V +G+I + GI
Sbjct: 700 IINRSVPAALENLGYSSAQIEEIVSYAVGHGTIGNAPGI 738
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 998 998 0.0010 122 3 11 22 0.39 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 59
No. of states in DFA: 624 (66 KB)
Total size of DFA: 511 KB (2229 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 82.63u 0.17s 82.80t Elapsed: 00:00:09
Total cpu time: 82.67u 0.17s 82.84t Elapsed: 00:00:09
Start: Thu Aug 15 16:22:37 2013 End: Thu Aug 15 16:22:46 2013