BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16893
(112 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 47 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 93
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 33 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With
1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 33 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 33 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog
In Complex With P38 Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 56 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 57 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 57 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 43 SVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 60 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 49 SVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENV 95
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 34 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 44 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 44 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 42 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 42 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 34 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha
Map Kinase
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 39 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 36 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 82
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 44 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals
A Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals
A Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals
A Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 35 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 81
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 33 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals
A Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants
In Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 44 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 42 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of
A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP
KINASE COMPLEX IN Solution
Length = 359
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 42 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three
Clinical P38alpha Inhibitors
Length = 362
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 39 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Mapk Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 39 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 48 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 48 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 39 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A
Selective Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2
Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2
Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2
Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2
Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen
Activated Protein Kinase P38 (P38 Map Kinase) The
Mammalian Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein
Kinase In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein
Kinase In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein
Kinase In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino- Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein
Kinase In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 43 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Biphenyl Amide Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole
Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex
With A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Biphenyl Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 49 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals
A Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants
In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-
8h-Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl-
Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-
8h-Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 49 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 56 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 43 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 60 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 37 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 57 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole
Based Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine
Based Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 43 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 40 GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
G++VA+KK+PN F + ++KR RELK+L FKHDN+
Sbjct: 79 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNI 115
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 40 GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
G++VA+KK+PN F + ++KR RELK+L FKHDN+
Sbjct: 80 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNI 116
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
S+CSS D + G ++A+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 66 SVCSSY----DVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 112
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
S+CS++ D R G +VA+KKL FQS + +KR +REL +L +H+NV
Sbjct: 57 SVCSAI----DKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 103
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
S+CS+ D R ++VA+KKL FQSL+ ++R +REL++L KH+NV
Sbjct: 43 SVCSAY----DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 89
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
S+CS++ D R G +VA+KKL FQS + +KR +REL +L +H+NV
Sbjct: 39 SVCSAI----DKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
S+CS+ D R ++VA+KKL FQSL+ ++R +REL++L KH+NV
Sbjct: 43 SVCSAY----DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 89
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
S+CS+ D R ++VA+KKL FQSL+ ++R +REL++L KH+NV
Sbjct: 35 SVCSAY----DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 81
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 26 SICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
++CS+V D R G +VA+KKL FQS + +KR +REL++L +H+NV
Sbjct: 40 AVCSAV----DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor,
Sr-3737
Length = 364
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 34 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 78 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 78 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 34 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 33 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 41 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 39 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based
Assessment Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based
Assessment Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 41 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted
Quinoline Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted
Quinoline Inhibitor
Length = 356
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 33 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ AV D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAVLD----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 36 DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
D + R VA+KK+ VF+ L+ KR+ RE+ +L HD+V
Sbjct: 74 DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In
Map Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ A+ + R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In
Map Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ A+ + R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In
Map Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ A+ + R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ A+ + R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 34 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ A+ + R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 35.8 bits (81), Expect = 0.007, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ A+ + R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 41 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 35.8 bits (81), Expect = 0.007, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ A+ + R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 35.8 bits (81), Expect = 0.007, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ A+ + R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 45 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 35.8 bits (81), Expect = 0.007, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ A+ + R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In
Map Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ A+ + R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ A+ + R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 42 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In
Map Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ A+ + R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In
Map Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ A+ + R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+C++ A+ + R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 40 VCAAYDAILE----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In
Map Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.017, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 41 RRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 33.9 bits (76), Expect = 0.024, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V A D G VA+KKL FQ+ +KR +REL +L H N+
Sbjct: 40 VCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 33.9 bits (76), Expect = 0.026, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V A D G VA+KKL FQ+ +KR +REL +L H N+
Sbjct: 38 VCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 33.1 bits (74), Expect = 0.044, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 36 DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNV 76
D R G VA+KK+ + FQ+ ++R FRE+ +L H+N+
Sbjct: 30 DRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENI 71
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 32.7 bits (73), Expect = 0.046, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 36 DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
D + VA+KK+ +F+ L+ KR+ RE+ +L K D +
Sbjct: 49 DKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 89
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.3 bits (72), Expect = 0.063, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 36 DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
D + VA+KK+ +F+ L+ KR+ RE+ +L K D +
Sbjct: 47 DKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 52 RVAIKKI-SPFEHQTYCQRTLREIKILLAFRHENI 85
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.6 bits (70), Expect = 0.12, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 52 RVAIKKI-SPFEHQTYCQRTLREIKILLAFRHENI 85
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 31.6 bits (70), Expect = 0.13, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 54 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 87
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 31.2 bits (69), Expect = 0.13, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 58 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 91
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 31.2 bits (69), Expect = 0.13, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 50 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 83
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 31.2 bits (69), Expect = 0.13, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 54 RVAIKKI-SPFEHQTYXQRTLREIKILLRFRHENI 87
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 54 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 87
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 55 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 88
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 48 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 81
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2
In Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 56 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 89
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 47 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 80
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide
Derived From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide
Derived From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 54 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 87
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 48 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 81
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 55 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 88
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 50 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 83
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 52 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 85
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 54 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 87
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 50 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 83
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 31.2 bits (69), Expect = 0.15, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 50 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 83
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 31.2 bits (69), Expect = 0.15, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 50 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 83
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 31.2 bits (69), Expect = 0.15, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 70 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 103
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 31.2 bits (69), Expect = 0.15, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 70 RVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 103
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 30.4 bits (67), Expect = 0.28, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA++K+ + F+ +R RE+K+L F+H+N+
Sbjct: 54 RVAIRKI-SPFEHQTYCQRTLREIKILLRFRHENI 87
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 30.0 bits (66), Expect = 0.32, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 42 RVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
RVA+KK+ + F+ +R RE+++L F+H+NV
Sbjct: 70 RVAIKKI-SPFEHQTYCQRTLREIQILLRFRHENV 103
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+CS+ T G VA+KK+ F + + R RE+K+L FKH+N+
Sbjct: 27 VCSATHKPT----GEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENI 71
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 29.6 bits (65), Expect = 0.42, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+CS+ T G VA+KK+ F + + R RE+K+L FKH+N+
Sbjct: 27 VCSATHKPT----GEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENI 71
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 29.6 bits (65), Expect = 0.42, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 27 ICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+CS+ T G VA+KK+ F + + R RE+K+L FKH+N+
Sbjct: 27 VCSATHKPT----GEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENI 71
>pdb|1RHC|A Chain A, F420-Dependent Secondary Alcohol Dehydrogenase In
Complex With An F420-Acetone Adduct
Length = 330
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 54 SLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMYPG 92
+L ++K+VF + C N +I T T R+MYPG
Sbjct: 60 ALQATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPG 98
>pdb|1Z7M|A Chain A, Atp Phosphoribosyl Transferase (hiszg Atp-prtase) From
Lactococcus Lactis
pdb|1Z7M|B Chain B, Atp Phosphoribosyl Transferase (hiszg Atp-prtase) From
Lactococcus Lactis
pdb|1Z7M|C Chain C, Atp Phosphoribosyl Transferase (hiszg Atp-prtase) From
Lactococcus Lactis
pdb|1Z7M|D Chain D, Atp Phosphoribosyl Transferase (hiszg Atp-prtase) From
Lactococcus Lactis
pdb|1Z7N|A Chain A, Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From
Lactococcus Lactis With Bound Prpp Substrate
pdb|1Z7N|B Chain B, Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From
Lactococcus Lactis With Bound Prpp Substrate
pdb|1Z7N|C Chain C, Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From
Lactococcus Lactis With Bound Prpp Substrate
pdb|1Z7N|D Chain D, Atp Phosphoribosyl Transferase (Hiszg Atp-Prtase) From
Lactococcus Lactis With Bound Prpp Substrate
Length = 344
Score = 26.9 bits (58), Expect = 2.5, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 51 VFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYT 85
++ +L S+ + F + KM F KH+ SIT +T
Sbjct: 68 LYTALESNGKTFNQEKMFQFIKHEGQSITLRYDFT 102
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex
With Sb203580
Length = 362
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Query: 39 DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
DGR V N+ KRV RE+++L F H N+
Sbjct: 60 DGRTV------NILSDSFLCKRVLREIRLLNHFHHPNI 91
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Query: 39 DGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
DGR V N+ KRV RE+++L F H N+
Sbjct: 60 DGRTV------NILSDSFLCKRVLREIRLLNHFHHPNI 91
>pdb|2DPL|A Chain A, Crystal Structure Of The Gmp Synthase From Pyrococcus
Horikoshii Ot3
pdb|2DPL|B Chain B, Crystal Structure Of The Gmp Synthase From Pyrococcus
Horikoshii Ot3
pdb|3A4I|A Chain A, Crystal Structure Of Gmp Synthetase Ph1347 From Pyrococcus
Horikoshii Ot3
pdb|3A4I|B Chain B, Crystal Structure Of Gmp Synthetase Ph1347 From Pyrococcus
Horikoshii Ot3
Length = 308
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 5 KTFSRPSDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSL 55
KTF DE G +H S++K VTDP + R++ + VF+ +
Sbjct: 68 KTFR---DEFGMNLHYVDAQDRFFSALKGVTDPEEKRKIIGRVFIEVFEEV 115
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V + D +RVA+KK+ V S K RE+K++ HDN+
Sbjct: 27 VFSAVDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRRLDHDNI 70
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 40 GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY 90
GR VA+K + + S +++FRE++++ H N+ T + +Y
Sbjct: 37 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 87
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 40 GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY 90
GR VA+K + + S +++FRE++++ H N+ T + +Y
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 40 GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTPYTTRRMY 90
GR VA+K + + S +++FRE++++ H N+ T + +Y
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human
P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 25.8 bits (55), Expect = 5.6, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 38 RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+ G++VALKK+ + RE+K+L KH+NV
Sbjct: 40 KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint
And Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 25.8 bits (55), Expect = 5.9, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 38 RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+ G++VALKK+ + RE+K+L KH+NV
Sbjct: 41 KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 38 RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV------SITQHTPYT 85
+ G++VALKK+ + RE+K+L KH+NV T+ +PY
Sbjct: 41 KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 94
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 38 RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+ G++VALKK+ + RE+K+L KH+NV
Sbjct: 41 KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,288,418
Number of Sequences: 62578
Number of extensions: 108712
Number of successful extensions: 354
Number of sequences better than 100.0: 145
Number of HSP's better than 100.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 238
Number of HSP's gapped (non-prelim): 145
length of query: 112
length of database: 14,973,337
effective HSP length: 76
effective length of query: 36
effective length of database: 10,217,409
effective search space: 367826724
effective search space used: 367826724
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 45 (21.9 bits)