RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16893
(112 letters)
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation,
transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens}
SCOP: d.144.1.7
Length = 367
Score = 70.4 bits (173), Expect = 8e-16
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 28 CSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+V + D R G +VA+KKL FQS + +KR +REL++L +H+NV
Sbjct: 38 YGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 70.0 bits (172), Expect = 9e-16
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 28 CSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV + D R G +VA+KKL FQS + +KR +REL +L +H+NV
Sbjct: 37 YGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 68.6 bits (168), Expect = 3e-15
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 28 CSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V A D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 38 QGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
>3n9x_A Phosphotransferase; malaria kinase, structural genomics,
structural genomics CON SGC; 2.05A {Plasmodium berghei}
PDB: 3nie_A*
Length = 432
Score = 68.6 bits (168), Expect = 3e-15
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V D + VA+KK+ +F+ L+ KR+ RE+ +L K D +
Sbjct: 42 VYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase;
HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X*
2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A*
1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A*
3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 67.7 bits (166), Expect = 7e-15
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 28 CSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
SV A D + G RVA+KKL FQS++ +KR +REL++L KH+NV
Sbjct: 42 YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 67.2 bits (164), Expect = 1e-14
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 28 CSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V A D R VA+KKL FQ+ +KR +REL ++ H N+
Sbjct: 75 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 66.4 bits (162), Expect = 3e-14
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V D + R VA+KK+ VF+ L+ KR+ RE+ +L HD+V
Sbjct: 69 VCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 63.8 bits (156), Expect = 2e-13
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V + T G VA+KK+ F + + R RE+K+L FKH+N+
Sbjct: 27 VCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFKHENI 71
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 62.7 bits (153), Expect = 4e-13
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 28 CSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V + D + RVA+KK+ + F+ +R RE+K+L F+H+N+
Sbjct: 40 YGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHENI 87
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 62.3 bits (152), Expect = 6e-13
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V + D +RVA+KK+ V S K RE+K++ HDN+
Sbjct: 27 VFSAVDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRRLDHDNI 70
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 62.0 bits (151), Expect = 8e-13
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNV 76
V D R G VA+KK+ + FQ+ ++R FRE+ +L H+N+
Sbjct: 25 VWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENI 71
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 57.7 bits (140), Expect = 3e-11
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 9/48 (18%)
Query: 38 RDGRRVALKKLP---------NVFQSLVSSKRVFRELKMLCFFKHDNV 76
+G VA+K++ N+ KRV RE+++L F H N+
Sbjct: 44 SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 44.6 bits (106), Expect = 1e-06
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V+ + G VA+KK V Q R + ++ L H N+
Sbjct: 39 VQLGKEKSTGMSVAIKK---VIQDPRFRNRELQIMQDLAVLHHPNI 81
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 41.5 bits (98), Expect = 1e-05
Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 28 CSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFK-HDNV 76
S V + + +V +K L V K++ RE+K+L + N+
Sbjct: 49 YSEVFEAINITNNEKVVVKIL-----KPVKKKKIKREIKILENLRGGPNI 93
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 39.3 bits (92), Expect = 7e-05
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V V D G+R ALKK+ + REL ++ H N+
Sbjct: 23 VCEVFDIESGKRFALKKVLQDP------RYKNRELDIMKVLDHVNI 62
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 37.4 bits (87), Expect = 3e-04
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V G VA+KK V Q + REL+++ H N+
Sbjct: 70 VYQAKLCDSGELVAIKK---VLQD---KRFKNRELQIMRKLDHCNI 109
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 37.3 bits (87), Expect = 4e-04
Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
S V V DG ALK++ + RE M F H N+
Sbjct: 43 SYVDLVEGLHDGHFYALKRIL--CHEQQDREEAQREADMHRLFNHPNI 88
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 35.2 bits (80), Expect = 0.002
Identities = 24/105 (22%), Positives = 35/105 (33%), Gaps = 18/105 (17%)
Query: 3 SGKTFSRPS--DEIGTMMHDEV-GLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSK 59
S T + S T+ DEV LL + PR+ L P + S
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE----VLTTNPRRLSIIAESI 337
Query: 60 RVFRELKMLCFFKHDN---------VSITQHTPYTTRRMYPGLTL 95
R L +KH N S+ P R+M+ L++
Sbjct: 338 RDG--LATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 34.3 bits (79), Expect = 0.004
Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELK-MLCFFKHDNV 76
+ V D GR ALK+L ++ + +E+ M H N+
Sbjct: 42 AFVYEAQDVGSGREYALKRLL--SNEEEKNRAIIQEVCFMKKLSGHPNI 88
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 32.7 bits (75), Expect = 0.013
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Query: 38 RDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+ VA+KK V Q + REL+++ KH NV
Sbjct: 62 VESDEVAIKK---VLQD---KRFKNRELQIMRIVKHPNV 94
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic;
HET: D15; 2.40A {Homo sapiens}
Length = 311
Score = 31.8 bits (73), Expect = 0.028
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 40 GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
G+ VA+KK V K RE++ML KH N+
Sbjct: 28 GQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNL 64
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein
kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum
iowa II} PDB: 2qg5_A*
Length = 277
Score = 31.4 bits (72), Expect = 0.037
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
VK R A KK+P + R +E++++ H N+
Sbjct: 23 GEVKIAVQKGTRIRRAAKKIPK--YFVEDVDRFKQEIEIMKSLDHPNI 68
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 31.2 bits (71), Expect = 0.042
Identities = 11/69 (15%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 28 CSSVKAVTDPRDGRRVALKKLP------NVFQSLVSSKRVFRELKMLCFFKHDNVSITQH 81
C VK + + ++VA++ + + + V E+++L H + I
Sbjct: 148 CGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI-IKIK 206
Query: 82 TPYTTRRMY 90
+ Y
Sbjct: 207 NFFDAEDYY 215
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 31.0 bits (71), Expect = 0.052
Identities = 8/49 (16%), Positives = 17/49 (34%), Gaps = 5/49 (10%)
Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSK---RVFRELKMLCFFKHDNV 76
++D A K +P L+ ++ E+ + H +V
Sbjct: 31 CFEISDADTKEVFAGKIVPK--SLLLKPHQREKMSMEISIHRSLAHQHV 77
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium
parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 30.8 bits (70), Expect = 0.068
Identities = 10/48 (20%), Positives = 18/48 (37%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V D A+K + S S+ ++ E+ +L H N+
Sbjct: 51 GEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 30.4 bits (69), Expect = 0.079
Identities = 8/49 (16%), Positives = 17/49 (34%), Gaps = 5/49 (10%)
Query: 31 VKAVTDPRDGRRVALKKLPNVFQSLVSSK---RVFRELKMLCFFKHDNV 76
++D A K +P L+ ++ E+ + H +V
Sbjct: 57 CFEISDADTKEVFAGKIVPK--SLLLKPHQREKMSMEISIHRSLAHQHV 103
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 30.3 bits (69), Expect = 0.080
Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 28 CSSVKAVTDPRDGRRVALKKLP------NVFQSLVSSKRVFRELKMLCFFKHDNVSITQH 81
C VK + + ++VA+K + + + V E+++L H + I
Sbjct: 23 CGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI-IKIK 81
Query: 82 TPYTTRRMY 90
+ Y
Sbjct: 82 NFFDAEDYY 90
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 30.3 bits (69), Expect = 0.081
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 31 VKAVTDPRDGRRVALKKLP--NVFQSLVSSKRVFRELKMLCFFKHDNV 76
VK V D R A+K L + + V +E+++L +H NV
Sbjct: 21 VKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 30.3 bits (69), Expect = 0.096
Identities = 9/48 (18%), Positives = 20/48 (41%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+ + DG+ + K+L + + + E+ +L KH N+
Sbjct: 20 GRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 30.2 bits (68), Expect = 0.10
Identities = 10/53 (18%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHT 82
V + D A+K++ + ++ ++V RE+K L +H + +
Sbjct: 21 VVFEAKNKVDDCNYAIKRIR-LPNRELAREKVMREVKALAKLEHPGIVRYFNA 72
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 30.4 bits (68), Expect = 0.10
Identities = 9/56 (16%), Positives = 14/56 (25%), Gaps = 1/56 (1%)
Query: 29 SSVKAVTDPRDGRRVALKKL-PNVFQSLVSSKRVFRELKMLCFFKHDNVSITQHTP 83
S V V D ALK S +R+ ++ +
Sbjct: 76 SVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRR 131
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 30.0 bits (68), Expect = 0.12
Identities = 9/48 (18%), Positives = 18/48 (37%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V D + A+K + + + RE+++L H N+
Sbjct: 36 GEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator,
signal transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 30.0 bits (68), Expect = 0.13
Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V + D R A+KK+ + + E+ +L H V
Sbjct: 20 GQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVMLLASLNHQYV 64
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 30.0 bits (68), Expect = 0.14
Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V DG+ +K++ ++++ RE+K L H N+
Sbjct: 25 GQVFKAKHRIDGKTYVIKRVK------YNNEKAEREVKALAKLDHVNI 66
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic;
HET: DKI; 1.53A {Homo sapiens}
Length = 331
Score = 29.5 bits (67), Expect = 0.16
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 40 GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
GR VA+KK + K RE+K+L +H+N+
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENL 86
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo
sapiens}
Length = 343
Score = 29.7 bits (67), Expect = 0.16
Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQ 80
S V V + + A+K + + E+ L + + I +
Sbjct: 23 SKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 73
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK,
phosphotyros picked threonine kinase, SGC, structural
genomics consortiu binding; HET: 7PE; 2.30A {Homo
sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A*
3hmo_A*
Length = 313
Score = 29.6 bits (67), Expect = 0.17
Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSITQ 80
S V V + + A+K + + E+ L + + I +
Sbjct: 42 SKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 92
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 29.4 bits (66), Expect = 0.18
Identities = 8/50 (16%), Positives = 16/50 (32%), Gaps = 1/50 (2%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNVSI 78
S V V + + A+K + + E+ L + + I
Sbjct: 70 SKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 118
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion
mutant, catalytic domain, synthetic inhibitor, TRAN
transferase inhibitor complex; HET: 0WH; 2.28A {Homo
sapiens} PDB: 4g34_A*
Length = 299
Score = 29.2 bits (66), Expect = 0.20
Identities = 9/43 (20%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 34 VTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+ D A+K++ + ++ ++V RE+K L +H +
Sbjct: 24 AKNKVDDCNYAIKRI-RLPNRELAREKVMREVKALAKLEHPGI 65
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 29.3 bits (66), Expect = 0.23
Identities = 12/48 (25%), Positives = 20/48 (41%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V DGR+ +K++ S + RE+ +L KH N+
Sbjct: 38 GKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 29.0 bits (65), Expect = 0.27
Identities = 8/51 (15%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 29 SSVKAVTDPRDGRRVALK---KLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V+ + + A+K K + +R+ E++++ H N+
Sbjct: 40 GVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNI 90
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A
beta 7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 28.8 bits (65), Expect = 0.36
Identities = 10/48 (20%), Positives = 19/48 (39%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
S V+ G+ A + S +++ RE ++ KH N+
Sbjct: 25 SVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNI 72
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide-
binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 28.4 bits (64), Expect = 0.41
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 40 GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
G + +K L S S+ E L F H NV
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 28.5 bits (64), Expect = 0.45
Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Query: 30 SVKAVTDPRDGRRVALKKLP----NVFQSLVSSKRVFRELKMLCFFKHDNVSITQ 80
SV + D VA+K + + + L + RV E+ +L + +
Sbjct: 58 SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR 112
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 28.3 bits (64), Expect = 0.48
Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 31 VKAVTDPRDGRRVALKKLP-NVFQSLVSSKRVFRELKMLCFFKHDNV 76
V G VA+K + +RV E+K+ C KH ++
Sbjct: 27 VYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSI 73
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 28.1 bits (63), Expect = 0.52
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRE---LKMLCFFKHDNV 76
SV DG A+K+ V + RE +L +H +V
Sbjct: 25 GSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG--QHSHV 73
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding,
phosphorylation, transferase-transferas inhibitor
complex; HET: SEP BX7; 1.80A {Homo sapiens}
Length = 319
Score = 27.8 bits (62), Expect = 0.66
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
++V + G A+K N+ L RE ++L H N+
Sbjct: 23 ANVFRGRHKKTGDLFAIKVFNNI-SFLRPVDVQMREFEVLKKLNHKNI 69
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin
kinase, nucleotide-binding; HET: ADP; 2.30A {Homo
sapiens}
Length = 335
Score = 27.8 bits (62), Expect = 0.69
Identities = 9/52 (17%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Query: 31 VKAVTDPRDGRRVALKKLP------NVFQSLVSSKRVFRELKMLCFFKHDNV 76
V D + V +K + + + +V E+ +L +H N+
Sbjct: 40 VWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 27.6 bits (62), Expect = 0.79
Identities = 9/48 (18%), Positives = 18/48 (37%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V D + A+K + + + RE+++L H N+
Sbjct: 36 GEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding,
phosphorylation, transferase-transferas inhibitor
complex; HET: BX7; 2.60A {Homo sapiens}
Length = 396
Score = 27.9 bits (62), Expect = 0.80
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
++V + G A+K N+ L RE ++L H N+
Sbjct: 23 ANVFRGRHKKTGDLFAIKVFNNI-SFLRPVDVQMREFEVLKKLNHKNI 69
>1xvx_A YFUA; periplasmic iron binding protein, iron binding protein; 1.53A
{Yersinia enterocolitica} SCOP: c.94.1.1 PDB: 1xvy_A*
Length = 312
Score = 27.7 bits (62), Expect = 0.81
Identities = 8/39 (20%), Positives = 17/39 (43%)
Query: 20 DEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSS 58
+++ + S+ + P R A FQ++VS+
Sbjct: 113 EKISEAELPKSIMDLAKPEWKGRWAASPSGADFQAIVSA 151
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 27.2 bits (61), Expect = 1.1
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 31 VKAVTDPRDGRRVALKKLP-NVFQSLVSSKRVFRELKMLCFFKHDNV 76
VK G +VA+K L +SL ++ RE++ L F+H ++
Sbjct: 27 VKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 27.3 bits (61), Expect = 1.1
Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKML-CFFKHDNV 76
V V DGR A+K+ + F+ R E+ +H
Sbjct: 71 GEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCC 119
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 27.2 bits (61), Expect = 1.1
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V V + G +K + +S V +++ E+++L H N+
Sbjct: 36 GDVHLVEERSSGLERVIKTINKD-RSQVPMEQIEAEIEVLKSLDHPNI 82
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain;
2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A
3dae_A 2fh9_A 3mn3_A
Length = 275
Score = 27.2 bits (61), Expect = 1.1
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 31 VKAVTDPRDGRRVALKKLP-NVFQSLVSSKRVFRELKMLCFFKHDNV 76
VK G++VALK + V R+ RE+ L +H ++
Sbjct: 29 VKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI 75
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 27.3 bits (61), Expect = 1.2
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 40 GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
G VA+K L RE+ ++ +H N+
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 26.9 bits (60), Expect = 1.3
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 40 GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
GR VA+K + + S +++FRE++++ H N+
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 26.8 bits (60), Expect = 1.3
Identities = 9/47 (19%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 31 VKAVTDPRDGRRVALKKLP-NVFQSLVSSKRVFRELKMLCFFKHDNV 76
V + + +ALK L + ++ RE+++ +H N+
Sbjct: 25 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 71
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 26.9 bits (60), Expect = 1.4
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 31 VKAVTDPRDGRRVALKKLP-NVFQSLVSSKRVFRELKMLCFFKHDNV 76
VK T + ++VALK + + + RV RE+ L +H ++
Sbjct: 25 VKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHI 71
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 26.9 bits (59), Expect = 1.4
Identities = 4/36 (11%), Positives = 11/36 (30%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRE 64
+ TD G + + ++ + +E
Sbjct: 92 YAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKE 127
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 27.0 bits (59), Expect = 1.5
Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
V G +VA+K+ S + +R E++++ H NV
Sbjct: 28 GYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNV 74
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP;
3.24A {Rattus norvegicus}
Length = 476
Score = 26.7 bits (59), Expect = 1.9
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 31 VKAVTDPRDGRRVALKKLP-NVFQSLVSSKRVFRELKMLCFFKHDNV 76
VK G +VA+K L +SL ++ RE++ L F+H ++
Sbjct: 32 VKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI 78
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 26.3 bits (58), Expect = 2.3
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 36 DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
D +D + ALK+ + S RE+ +L KH NV
Sbjct: 44 DGKDDKDYALKQ----IEGTGISMSACREIALLRELKHPNV 80
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 26.1 bits (58), Expect = 2.4
Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 8/55 (14%)
Query: 30 SVKAVTDPRDGRRVALKKLP----NVFQSLVSSKRVFRE---LKML-CFFKHDNV 76
+V A D +VA+K +P + L S E L + H V
Sbjct: 46 TVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGV 100
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel
beta sheet, protein transport; HET: SEP EDO; 1.00A
{Homo sapiens} PDB: 3via_A 2dhi_A
Length = 112
Score = 25.6 bits (56), Expect = 2.4
Identities = 8/52 (15%), Positives = 20/52 (38%)
Query: 11 SDEIGTMMHDEVGLLSICSSVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVF 62
D+ + D+V + C +++ + RD + K + Q + +
Sbjct: 38 DDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVCRDGKTI 89
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A
{Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Length = 398
Score = 26.5 bits (59), Expect = 2.4
Identities = 2/20 (10%), Positives = 7/20 (35%)
Query: 89 MYPGLTLRLGEVHVRRWTKD 108
+ G+ V ++ +
Sbjct: 327 WAKSHSFHTGQTPVMKYNRA 346
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase;
HET: NAD; 2.27A {Pseudomonas putida}
Length = 398
Score = 26.5 bits (59), Expect = 2.4
Identities = 2/20 (10%), Positives = 6/20 (30%)
Query: 89 MYPGLTLRLGEVHVRRWTKD 108
+ + G V + +
Sbjct: 326 WTKSIRIMTGMAPVTNYNRH 345
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 26.2 bits (58), Expect = 2.5
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 36 DPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
D VA +L + + +R E +ML +H N+
Sbjct: 47 DTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 87
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 25.6 bits (56), Expect = 4.0
Identities = 9/47 (19%), Positives = 17/47 (36%)
Query: 30 SVKAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+V G V ++++ S + EL + F H N+
Sbjct: 42 TVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNI 88
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 25.2 bits (56), Expect = 4.5
Identities = 9/47 (19%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 31 VKAVTDPRDGRRVALKKLP-NVFQSLVSSKRVFRELKMLCFFKHDNV 76
V + ++ +ALK L + + ++ RE+++ +H N+
Sbjct: 30 VYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNI 76
>2eva_A TAK1 kinase - TAB1 chimera fusion protein;
transferase/transferase activator complex; HET: ADN;
2.00A {Homo sapiens}
Length = 307
Score = 25.4 bits (56), Expect = 4.6
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Query: 40 GRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHDNV 76
+ VA+K++ +S K EL+ L H N+
Sbjct: 31 AKDVAIKQI----ESESERKAFIVELRQLSRVNHPNI 63
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 25.3 bits (56), Expect = 5.0
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 10/46 (21%)
Query: 36 DPRDGRRVALKKLPNVFQSLVSSKRVF-----RELKMLCFFKHDNV 76
+ G++VALKK+ + + K F RE+K+L KH+NV
Sbjct: 38 HRKTGQKVALKKVL-----MENEKEGFPITALREIKILQLLKHENV 78
>2dy1_A Elongation factor G; translocation, GTP complex, structural
genomics, NPPSFA; HET: GTP; 1.60A {Thermus thermophilus}
SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1
PDB: 1wdt_A*
Length = 665
Score = 25.2 bits (56), Expect = 6.7
Identities = 5/19 (26%), Positives = 6/19 (31%), Gaps = 2/19 (10%)
Query: 85 TTRRM--YPGLTLRLGEVH 101
T + G R G V
Sbjct: 25 LTEALLYKTGAKERRGRVE 43
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 25.0 bits (55), Expect = 6.8
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Query: 29 SSVKAVTDPRDGRRVALKKLPNVFQSLVSSK---RVFRELKMLCFFKHDNV 76
S V DG VALKK+ L+ +K +E+ +L H NV
Sbjct: 46 SEVYRAACLLDGVPVALKKVQ--IFDLMDAKARADCIKEIDLLKQLNHPNV 94
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 24.8 bits (55), Expect = 8.0
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Query: 36 DPRDGRRVALKKLPNVFQSLVSSKRVF-----RELKMLCFFKHDNV 76
D + VA+KK+ +K RE+K+L H N+
Sbjct: 31 DKNTNQIVAIKKIK--LGHRSEAKDGINRTALREIKLLQELSHPNI 74
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase,
transferase, signaling Pro; HET: ACP; 1.80A
{Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A*
4f1o_A*
Length = 287
Score = 24.6 bits (54), Expect = 8.2
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Query: 38 RDGRRVALKKL----PNVFQSLVSSKRVF-RELKMLCFFKHDNV 76
+D VA+K L ++ + F RE+ ++ H N+
Sbjct: 42 KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.135 0.409
Gapped
Lambda K H
0.267 0.0707 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,689,946
Number of extensions: 86490
Number of successful extensions: 257
Number of sequences better than 10.0: 1
Number of HSP's gapped: 233
Number of HSP's successfully gapped: 91
Length of query: 112
Length of database: 6,701,793
Length adjustment: 76
Effective length of query: 36
Effective length of database: 4,579,797
Effective search space: 164872692
Effective search space used: 164872692
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (23.5 bits)